DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 2.0E-21 T 23-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 PRINTS PR01005 Flagellar hook-associated protein signature 218 236 2.0E-21 T 23-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 PRINTS PR01005 Flagellar hook-associated protein signature 51 73 2.0E-21 T 23-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 PRINTS PR01005 Flagellar hook-associated protein signature 262 284 2.0E-21 T 23-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 PRINTS PR01005 Flagellar hook-associated protein signature 511 535 2.0E-21 T 23-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 2.0E-21 T 23-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 2.0E-21 T 23-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 341 4.3E-80 T 23-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 SUPERFAMILY SSF64518 129 597 3.53E-38 T 23-10-2018 DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 544 598 8.0E-10 T 23-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DLM_2438 9a1d37d883e74dd7877a3e650d31862c 600 Pfam PF00460 Flagella basal body rod protein 8 36 7.4E-9 T 23-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DLM_3013 76716cdfc6afd2de719ec8610cb31032 399 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 23-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DLM_3013 76716cdfc6afd2de719ec8610cb31032 399 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 7 398 1.9E-193 T 23-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 DLM_3013 76716cdfc6afd2de719ec8610cb31032 399 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 396 52.619 T 23-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 DLM_3013 76716cdfc6afd2de719ec8610cb31032 399 Gene3D G3DSA:3.90.1150.10 40 388 5.3E-133 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3013 76716cdfc6afd2de719ec8610cb31032 399 Gene3D G3DSA:3.40.640.10 58 297 5.3E-133 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3013 76716cdfc6afd2de719ec8610cb31032 399 Pfam PF00155 Aminotransferase class I and II 43 387 4.0E-69 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_3013 76716cdfc6afd2de719ec8610cb31032 399 SUPERFAMILY SSF53383 4 396 5.39E-116 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2299 bfef27ba6bbf658fd919bce969b21985 151 Gene3D G3DSA:3.10.129.10 1 146 5.2E-44 T 23-10-2018 DLM_2299 bfef27ba6bbf658fd919bce969b21985 151 SUPERFAMILY SSF54637 2 148 2.27E-33 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_2299 bfef27ba6bbf658fd919bce969b21985 151 Pfam PF01575 MaoC like domain 8 112 1.1E-17 T 23-10-2018 IPR002539 MaoC-like dehydratase domain DLM_2718 e97804d3f984719268c14777fc86df8f 311 SUPERFAMILY SSF81324 34 161 1.31E-26 T 23-10-2018 DLM_2718 e97804d3f984719268c14777fc86df8f 311 Gene3D G3DSA:2.60.40.1400 142 300 1.2E-43 T 23-10-2018 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic DLM_2718 e97804d3f984719268c14777fc86df8f 311 Pfam PF01007 Inward rectifier potassium channel 43 304 1.9E-35 T 23-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 DLM_2718 e97804d3f984719268c14777fc86df8f 311 Gene3D G3DSA:1.10.287.70 38 141 3.5E-32 T 23-10-2018 DLM_2718 e97804d3f984719268c14777fc86df8f 311 SUPERFAMILY SSF81296 121 307 1.21E-50 T 23-10-2018 IPR014756 Immunoglobulin E-set DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 SUPERFAMILY SSF49503 373 498 2.82E-34 T 23-10-2018 IPR008972 Cupredoxin DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 Pfam PF00394 Multicopper oxidase 224 315 4.7E-8 T 23-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 Pfam PF07732 Multicopper oxidase 94 201 1.0E-30 T 23-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 SUPERFAMILY SSF49503 208 314 8.59E-20 T 23-10-2018 IPR008972 Cupredoxin DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 Gene3D G3DSA:2.60.40.420 199 365 7.7E-40 T 23-10-2018 IPR008972 Cupredoxin DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 SUPERFAMILY SSF49503 89 202 8.15E-31 T 23-10-2018 IPR008972 Cupredoxin DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 Pfam PF07731 Multicopper oxidase 386 499 7.9E-30 T 23-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 Gene3D G3DSA:2.60.40.420 65 197 4.5E-42 T 23-10-2018 IPR008972 Cupredoxin DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 Gene3D G3DSA:2.60.40.420 367 499 1.2E-42 T 23-10-2018 IPR008972 Cupredoxin DLM_3130 52c90797eb04a54c3f29250e64d9abf4 500 ProSitePatterns PS00080 Multicopper oxidases signature 2. 481 492 - T 23-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 7.7E-17 T 23-10-2018 IPR000362 Fumarate lyase family DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 7.7E-17 T 23-10-2018 IPR000362 Fumarate lyase family DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.7E-17 T 23-10-2018 IPR000362 Fumarate lyase family DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.7E-17 T 23-10-2018 IPR000362 Fumarate lyase family DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 Gene3D G3DSA:1.20.200.10 118 447 5.1E-150 T 23-10-2018 DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 Gene3D G3DSA:1.10.275.10 1 117 1.9E-42 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 Gene3D G3DSA:1.10.40.30 382 446 5.1E-150 T 23-10-2018 DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 446 2.2E-47 T 23-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 SUPERFAMILY SSF48557 10 455 7.23E-102 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.1E-126 T 23-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_0074 76814aac4ea48cce7b5b3a2932eed0ac 456 Pfam PF00206 Lyase 14 312 8.0E-62 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal DLM_3324 c95cedb7fe61e5398565d1adc3347256 128 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 54 78 - T 23-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 DLM_3324 c95cedb7fe61e5398565d1adc3347256 128 Pfam PF01152 Bacterial-like globin 7 124 1.8E-35 T 23-10-2018 IPR001486 Truncated hemoglobin GO:0019825 DLM_3324 c95cedb7fe61e5398565d1adc3347256 128 SUPERFAMILY SSF46458 5 126 1.46E-36 T 23-10-2018 IPR009050 Globin-like superfamily DLM_3324 c95cedb7fe61e5398565d1adc3347256 128 Gene3D G3DSA:1.10.490.10 1 128 7.4E-43 T 23-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DLM_0134 db9259630c68c4ab39052e13484b0769 593 SMART SM00400 33 87 2.9E-34 T 23-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DLM_0134 db9259630c68c4ab39052e13484b0769 593 TIGRFAM TIGR01391 dnaG: DNA primase 2 413 1.1E-143 T 23-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 DLM_0134 db9259630c68c4ab39052e13484b0769 593 Gene3D G3DSA:1.10.860.10 445 590 7.3E-11 T 23-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DLM_0134 db9259630c68c4ab39052e13484b0769 593 Hamap MF_00974 DNA primase [dnaG]. 1 586 28.691 T 23-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DLM_0134 db9259630c68c4ab39052e13484b0769 593 SUPERFAMILY SSF117023 456 588 1.44E-17 T 23-10-2018 DLM_0134 db9259630c68c4ab39052e13484b0769 593 SMART SM00766 455 585 1.5E-25 T 23-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 DLM_0134 db9259630c68c4ab39052e13484b0769 593 SMART SM00493 255 326 5.9E-22 T 23-10-2018 IPR006171 TOPRIM domain DLM_0134 db9259630c68c4ab39052e13484b0769 593 Gene3D G3DSA:3.90.980.10 108 236 1.4E-40 T 23-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DLM_0134 db9259630c68c4ab39052e13484b0769 593 SUPERFAMILY SSF57783 2 97 1.7E-38 T 23-10-2018 DLM_0134 db9259630c68c4ab39052e13484b0769 593 Gene3D G3DSA:3.90.580.10 1 99 1.0E-39 T 23-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DLM_0134 db9259630c68c4ab39052e13484b0769 593 Pfam PF13662 Toprim domain 256 321 1.2E-15 T 23-10-2018 IPR006171 TOPRIM domain DLM_0134 db9259630c68c4ab39052e13484b0769 593 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 248 1.2E-38 T 23-10-2018 IPR013264 DNA primase, catalytic core, N-terminal DLM_0134 db9259630c68c4ab39052e13484b0769 593 Pfam PF10410 DnaB-helicase binding domain of primase 368 421 2.4E-10 T 23-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 DLM_0134 db9259630c68c4ab39052e13484b0769 593 Pfam PF01807 CHC2 zinc finger 3 95 2.5E-39 T 23-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DLM_0134 db9259630c68c4ab39052e13484b0769 593 Gene3D G3DSA:1.20.50.20 365 422 3.1E-7 T 23-10-2018 DLM_0134 db9259630c68c4ab39052e13484b0769 593 PIRSF PIRSF002811 1 588 3.3E-145 T 23-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DLM_0134 db9259630c68c4ab39052e13484b0769 593 Gene3D G3DSA:3.40.1360.10 237 363 2.3E-44 T 23-10-2018 DLM_0134 db9259630c68c4ab39052e13484b0769 593 Pfam PF08278 DNA primase DnaG DnaB-binding 458 584 1.9E-19 T 23-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 DLM_0134 db9259630c68c4ab39052e13484b0769 593 SUPERFAMILY SSF56731 115 419 7.98E-104 T 23-10-2018 DLM_2635 e13f037eaf550f8e7b4d7d93112b8bb5 299 PRINTS PR00394 RHS protein signature 142 161 2.2E-8 T 23-10-2018 IPR001826 RHS protein DLM_2635 e13f037eaf550f8e7b4d7d93112b8bb5 299 PRINTS PR00394 RHS protein signature 60 80 2.2E-8 T 23-10-2018 IPR001826 RHS protein DLM_2635 e13f037eaf550f8e7b4d7d93112b8bb5 299 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 93 174 4.6E-27 T 23-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DLM_2635 e13f037eaf550f8e7b4d7d93112b8bb5 299 Gene3D G3DSA:2.180.10.10 49 174 1.2E-33 T 23-10-2018 DLM_2635 e13f037eaf550f8e7b4d7d93112b8bb5 299 Pfam PF03527 RHS protein 66 101 3.7E-12 T 23-10-2018 IPR001826 RHS protein DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 SMART SM00490 473 559 6.6E-19 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Gene3D G3DSA:3.40.50.300 282 427 7.8E-52 T 23-10-2018 DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 19 671 0.0 T 23-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Pfam PF00271 Helicase conserved C-terminal domain 457 557 1.4E-16 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 SUPERFAMILY SSF52540 51 598 1.81E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 SUPERFAMILY SSF52540 18 428 1.28E-132 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Pfam PF02151 UvrB/uvrC motif 639 672 3.8E-9 T 23-10-2018 IPR001943 UVR domain GO:0005515 DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Gene3D G3DSA:3.40.50.300 11 251 1.6E-72 T 23-10-2018 DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Pfam PF12344 Ultra-violet resistance protein B 565 607 8.3E-23 T 23-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Gene3D G3DSA:4.10.860.10 618 677 4.8E-17 T 23-10-2018 DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Hamap MF_00204 UvrABC system protein B [uvrB]. 17 673 43.619 T 23-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 SUPERFAMILY SSF46600 628 673 5.49E-12 T 23-10-2018 IPR036876 UVR domain superfamily DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Gene3D G3DSA:3.40.50.300 428 609 2.0E-48 T 23-10-2018 DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 Pfam PF04851 Type III restriction enzyme, res subunit 31 152 6.4E-7 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DLM_0956 f45309633662d62baca6f99c5b37e5f9 679 SMART SM00487 23 438 1.5E-26 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_0504 e4c616e5da7008b0bfc0bfcc21d0ebe2 286 Gene3D G3DSA:3.40.50.720 2 285 2.5E-30 T 23-10-2018 DLM_0504 e4c616e5da7008b0bfc0bfcc21d0ebe2 286 SUPERFAMILY SSF51735 4 243 2.85E-27 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0504 e4c616e5da7008b0bfc0bfcc21d0ebe2 286 Pfam PF13460 NAD(P)H-binding 7 120 4.1E-11 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_0426 ec9654882fff4a473104036483aca4a8 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 543 8.5E-168 T 23-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DLM_0426 ec9654882fff4a473104036483aca4a8 686 Gene3D G3DSA:1.10.730.10 388 546 8.0E-37 T 23-10-2018 DLM_0426 ec9654882fff4a473104036483aca4a8 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 3.5E-23 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DLM_0426 ec9654882fff4a473104036483aca4a8 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 392 403 3.5E-23 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DLM_0426 ec9654882fff4a473104036483aca4a8 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 3.5E-23 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DLM_0426 ec9654882fff4a473104036483aca4a8 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 298 313 3.5E-23 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DLM_0426 ec9654882fff4a473104036483aca4a8 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 259 270 3.5E-23 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DLM_0426 ec9654882fff4a473104036483aca4a8 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 3.5E-23 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DLM_0426 ec9654882fff4a473104036483aca4a8 686 Pfam PF09334 tRNA synthetases class I (M) 6 404 2.6E-145 T 23-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0426 ec9654882fff4a473104036483aca4a8 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0426 ec9654882fff4a473104036483aca4a8 686 Gene3D G3DSA:3.40.50.620 6 387 3.6E-145 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0426 ec9654882fff4a473104036483aca4a8 686 SUPERFAMILY SSF50249 581 685 8.81E-28 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0426 ec9654882fff4a473104036483aca4a8 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 551 685 2.2E-39 T 23-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DLM_0426 ec9654882fff4a473104036483aca4a8 686 Pfam PF08264 Anticodon-binding domain of tRNA 422 509 1.4E-7 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DLM_0426 ec9654882fff4a473104036483aca4a8 686 Gene3D G3DSA:2.40.50.140 573 686 2.4E-32 T 23-10-2018 DLM_0426 ec9654882fff4a473104036483aca4a8 686 SUPERFAMILY SSF47323 397 556 1.74E-42 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0426 ec9654882fff4a473104036483aca4a8 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 554 39.002 T 23-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_0426 ec9654882fff4a473104036483aca4a8 686 Pfam PF01588 Putative tRNA binding domain 588 683 1.3E-22 T 23-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DLM_0426 ec9654882fff4a473104036483aca4a8 686 SUPERFAMILY SSF57770 140 174 2.09E-12 T 23-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_0426 ec9654882fff4a473104036483aca4a8 686 SUPERFAMILY SSF52374 3 395 4.9E-94 T 23-10-2018 DLM_0426 ec9654882fff4a473104036483aca4a8 686 Gene3D G3DSA:2.20.28.20 140 174 3.6E-145 T 23-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_3544 861f95308da8921e42967fca6fe22fb4 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.3E-31 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3544 861f95308da8921e42967fca6fe22fb4 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DLM_3544 861f95308da8921e42967fca6fe22fb4 89 SUPERFAMILY SSF55594 1 87 1.01E-29 T 23-10-2018 IPR035895 HPr-like superfamily DLM_3544 861f95308da8921e42967fca6fe22fb4 89 Pfam PF00381 PTS HPr component phosphorylation site 5 82 1.6E-28 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3544 861f95308da8921e42967fca6fe22fb4 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DLM_3544 861f95308da8921e42967fca6fe22fb4 89 Gene3D G3DSA:3.30.1340.10 1 88 2.9E-32 T 23-10-2018 IPR035895 HPr-like superfamily DLM_3544 861f95308da8921e42967fca6fe22fb4 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.3E-16 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3544 861f95308da8921e42967fca6fe22fb4 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.3E-16 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3544 861f95308da8921e42967fca6fe22fb4 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.3E-16 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_1273 17608ff455edbfe3b05950006fef3199 166 Pfam PF08822 Protein of unknown function (DUF1804) 2 162 8.1E-66 T 23-10-2018 IPR014926 Bacteriophage D3112, Orf24 DLM_4161 8a09b7f5a38042a8f5a92858f9a16132 270 SUPERFAMILY SSF50685 86 177 5.93E-12 T 23-10-2018 IPR036908 RlpA-like domain superfamily DLM_4161 8a09b7f5a38042a8f5a92858f9a16132 270 Pfam PF05036 Sporulation related domain 200 262 5.5E-12 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 DLM_4161 8a09b7f5a38042a8f5a92858f9a16132 270 Gene3D G3DSA:3.30.70.1070 201 267 2.2E-8 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_4161 8a09b7f5a38042a8f5a92858f9a16132 270 Gene3D G3DSA:2.40.40.10 85 177 5.0E-38 T 23-10-2018 IPR036908 RlpA-like domain superfamily DLM_4161 8a09b7f5a38042a8f5a92858f9a16132 270 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 8 177 25.29 T 23-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 DLM_4161 8a09b7f5a38042a8f5a92858f9a16132 270 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 87 182 4.5E-43 T 23-10-2018 IPR012997 Rare lipoprotein A DLM_4161 8a09b7f5a38042a8f5a92858f9a16132 270 SUPERFAMILY SSF110997 197 262 1.31E-9 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_4161 8a09b7f5a38042a8f5a92858f9a16132 270 Pfam PF03330 Lytic transglycolase 85 173 2.1E-27 T 23-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 SUPERFAMILY SSF52540 550 857 1.53E-82 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Gene3D G3DSA:3.40.50.300 343 548 4.3E-68 T 23-10-2018 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 2.4E-12 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 23-10-2018 IPR028299 ClpA/B, conserved site 2 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 SUPERFAMILY SSF81923 4 156 6.87E-38 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 SUPERFAMILY SSF52540 159 548 2.67E-99 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Gene3D G3DSA:3.40.50.300 554 767 3.5E-87 T 23-10-2018 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 601 763 6.7E-56 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Gene3D G3DSA:1.10.8.60 769 859 2.5E-26 T 23-10-2018 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 23-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Gene3D G3DSA:3.40.50.300 149 342 1.3E-74 T 23-10-2018 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.4E-11 T 23-10-2018 IPR004176 Clp, N-terminal DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 5.1E-9 T 23-10-2018 IPR004176 Clp, N-terminal DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 SMART SM00382 198 344 2.6E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 SMART SM00382 601 744 1.4E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 7.7E-42 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 7.7E-42 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 7.7E-42 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 7.7E-42 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 23-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 2.4E-24 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 Gene3D G3DSA:1.10.1780.10 1 148 4.4E-30 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DLM_1042 c80bff636039c7dbdac04b508ee01ba4 859 SMART SM01086 769 858 7.4E-35 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_2215 05bc04003612c64b6a45fc210554bbd1 102 SUPERFAMILY SSF52833 1 92 3.35E-19 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_2215 05bc04003612c64b6a45fc210554bbd1 102 Gene3D G3DSA:3.40.30.10 1 94 8.2E-24 T 23-10-2018 DLM_1340 3b2359cd072a54bcb5b6131cb73a1972 349 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 338 3.3E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_1340 3b2359cd072a54bcb5b6131cb73a1972 349 SMART SM00267 176 342 6.9E-53 T 23-10-2018 IPR000160 GGDEF domain DLM_1340 3b2359cd072a54bcb5b6131cb73a1972 349 Gene3D G3DSA:3.30.70.270 181 346 9.0E-52 T 23-10-2018 DLM_1340 3b2359cd072a54bcb5b6131cb73a1972 349 SUPERFAMILY SSF55073 192 341 4.0E-45 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_1340 3b2359cd072a54bcb5b6131cb73a1972 349 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 340 1.7E-44 T 23-10-2018 IPR000160 GGDEF domain DLM_2426 69d5f1bdc15664b448dd27dc522d70e0 358 Gene3D G3DSA:3.40.50.620 1 210 2.0E-92 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_2426 69d5f1bdc15664b448dd27dc522d70e0 358 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 357 7.1E-133 T 23-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DLM_2426 69d5f1bdc15664b448dd27dc522d70e0 358 Gene3D G3DSA:2.40.30.10 280 358 7.7E-22 T 23-10-2018 DLM_2426 69d5f1bdc15664b448dd27dc522d70e0 358 Gene3D G3DSA:2.30.30.280 211 278 8.4E-27 T 23-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DLM_2426 69d5f1bdc15664b448dd27dc522d70e0 358 SUPERFAMILY SSF52402 2 242 2.65E-60 T 23-10-2018 DLM_2426 69d5f1bdc15664b448dd27dc522d70e0 358 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 358 39.128 T 23-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DLM_2426 69d5f1bdc15664b448dd27dc522d70e0 358 Pfam PF03054 tRNA methyl transferase 5 357 3.0E-134 T 23-10-2018 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 287 8.2E-128 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 Pfam PF01039 Carboxyl transferase domain 108 243 8.2E-16 T 23-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 38.103 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 SUPERFAMILY SSF52096 28 286 5.64E-84 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_2454 a58d28ab65a83da35e74b05e0de7de9a 289 Gene3D G3DSA:3.90.226.10 28 288 3.7E-83 T 23-10-2018 DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 SUPERFAMILY SSF46894 123 226 2.01E-32 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 7.1E-28 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 Gene3D G3DSA:3.40.50.2300 1 128 7.5E-41 T 23-10-2018 DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.9E-110 T 23-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 SMART SM00862 150 225 3.7E-28 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 SUPERFAMILY SSF52172 3 126 1.99E-44 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 SMART SM00448 3 116 4.7E-45 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 Gene3D G3DSA:1.10.10.10 129 228 6.8E-39 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3748 ea2538d3c0249538e1cd96a8927b69ce 229 Pfam PF00072 Response regulator receiver domain 5 117 2.6E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2056 0757878a4ac5ab2d3cd07856e749e2fe 167 SMART SM00347 37 137 7.1E-13 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2056 0757878a4ac5ab2d3cd07856e749e2fe 167 SUPERFAMILY SSF46785 11 154 1.33E-27 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2056 0757878a4ac5ab2d3cd07856e749e2fe 167 Pfam PF12802 MarR family 42 101 1.1E-12 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2056 0757878a4ac5ab2d3cd07856e749e2fe 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 3.4E-6 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2056 0757878a4ac5ab2d3cd07856e749e2fe 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 3.4E-6 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2056 0757878a4ac5ab2d3cd07856e749e2fe 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 3.4E-6 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2056 0757878a4ac5ab2d3cd07856e749e2fe 167 Gene3D G3DSA:1.10.10.10 3 158 2.1E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 Gene3D G3DSA:3.30.930.10 156 502 7.7E-126 T 23-10-2018 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 SUPERFAMILY SSF50249 12 153 3.81E-43 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 SUPERFAMILY SSF55681 160 500 3.06E-117 T 23-10-2018 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 Gene3D G3DSA:2.40.50.140 14 152 1.8E-41 T 23-10-2018 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 502 43.239 T 23-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 499 1.2E-81 T 23-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 501 3.6E-199 T 23-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 Pfam PF01336 OB-fold nucleic acid binding domain 67 144 9.6E-16 T 23-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 384 400 4.3E-39 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 213 229 4.3E-39 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 197 207 4.3E-39 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 260 277 4.3E-39 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DLM_0344 1a6c70d3ba5f32d8537bb055f7683447 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 242 255 4.3E-39 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DLM_3469 39aaeae3488c1f7a1807f99019c4b384 460 Gene3D G3DSA:1.10.10.1100 384 453 7.0E-14 T 23-10-2018 DLM_3469 39aaeae3488c1f7a1807f99019c4b384 460 Gene3D G3DSA:3.50.50.60 3 348 6.5E-93 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3469 39aaeae3488c1f7a1807f99019c4b384 460 Pfam PF01266 FAD dependent oxidoreductase 3 351 2.9E-52 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_3469 39aaeae3488c1f7a1807f99019c4b384 460 Gene3D G3DSA:3.30.9.10 86 316 6.5E-93 T 23-10-2018 DLM_3469 39aaeae3488c1f7a1807f99019c4b384 460 Pfam PF04324 BFD-like [2Fe-2S] binding domain 392 442 1.8E-6 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DLM_3469 39aaeae3488c1f7a1807f99019c4b384 460 SUPERFAMILY SSF54373 219 314 7.59E-11 T 23-10-2018 DLM_3469 39aaeae3488c1f7a1807f99019c4b384 460 SUPERFAMILY SSF51905 1 371 2.95E-40 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 SUPERFAMILY SSF47384 195 272 3.92E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 SMART SM00388 211 272 1.9E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 SMART SM00304 158 210 3.9E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 Gene3D G3DSA:3.30.565.10 284 423 9.3E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 SUPERFAMILY SSF158472 164 206 6.54E-5 T 23-10-2018 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 SUPERFAMILY SSF55874 262 422 3.01E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 422 1.1E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 SMART SM00387 315 423 1.4E-29 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 6.8E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 6.8E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 6.8E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 6.8E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 Gene3D G3DSA:1.10.287.130 162 273 2.3E-22 T 23-10-2018 DLM_0022 51f518ba93f5f2e9c740a12e99313a79 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 2.7E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2240 8fae31edc4a3cf75d995b3159905d958 480 Pfam PF02321 Outer membrane efflux protein 68 258 5.0E-20 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_2240 8fae31edc4a3cf75d995b3159905d958 480 Pfam PF02321 Outer membrane efflux protein 290 467 2.1E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_2240 8fae31edc4a3cf75d995b3159905d958 480 Gene3D G3DSA:2.20.200.10 105 359 4.1E-109 T 23-10-2018 DLM_2240 8fae31edc4a3cf75d995b3159905d958 480 Gene3D G3DSA:1.20.1600.10 58 470 4.1E-109 T 23-10-2018 DLM_2240 8fae31edc4a3cf75d995b3159905d958 480 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 469 1.7E-91 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_2240 8fae31edc4a3cf75d995b3159905d958 480 SUPERFAMILY SSF56954 4 471 2.35E-87 T 23-10-2018 DLM_1569 472d4c80202dbc35b92433d70f20ffe2 165 SUPERFAMILY SSF49503 44 153 6.11E-20 T 23-10-2018 IPR008972 Cupredoxin DLM_1569 472d4c80202dbc35b92433d70f20ffe2 165 Gene3D G3DSA:2.60.40.420 33 155 2.0E-20 T 23-10-2018 IPR008972 Cupredoxin DLM_1906 a57687e769266e99d606b13649f67ff3 249 Pfam PF01061 ABC-2 type transporter 6 212 5.6E-33 T 23-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DLM_1906 a57687e769266e99d606b13649f67ff3 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 24 45 2.5E-15 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_1906 a57687e769266e99d606b13649f67ff3 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 190 2.5E-15 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_1906 a57687e769266e99d606b13649f67ff3 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 134 158 2.5E-15 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_1906 a57687e769266e99d606b13649f67ff3 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 2.5E-15 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_1906 a57687e769266e99d606b13649f67ff3 249 PIRSF PIRSF006648 2 245 2.9E-43 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_1055 484fe7ace1566cb82f15efa7eefaec15 164 Pfam PF02674 Colicin V production protein 4 144 7.4E-35 T 23-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 Pfam PF01225 Mur ligase family, catalytic domain 2 99 2.3E-17 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 SUPERFAMILY SSF51984 1 90 2.88E-20 T 23-10-2018 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 SUPERFAMILY SSF53623 95 316 6.15E-49 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 456 58.433 T 23-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 367 2.2E-10 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 Gene3D G3DSA:3.40.50.720 1 90 7.6E-35 T 23-10-2018 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 Gene3D G3DSA:3.40.1190.10 91 321 2.6E-61 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 455 8.5E-224 T 23-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 Gene3D G3DSA:3.90.190.20 322 456 3.7E-28 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 Pfam PF08245 Mur ligase middle domain 108 299 5.3E-22 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DLM_2998 ebd010a9f86cc416840e5024b1dc6f27 461 SUPERFAMILY SSF53244 319 453 4.06E-37 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 8.0E-51 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 8.0E-51 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 8.0E-51 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 8.0E-51 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 8.0E-51 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 PIRSF PIRSF000729 4 372 1.5E-129 T 23-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 Gene3D G3DSA:3.40.1160.10 1 269 1.4E-94 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 Pfam PF01472 PUA domain 281 353 2.2E-21 T 23-10-2018 IPR002478 PUA domain GO:0003723 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 Gene3D G3DSA:2.30.130.10 270 371 1.2E-32 T 23-10-2018 IPR036974 PUA domain superfamily GO:0003723 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 SUPERFAMILY SSF88697 281 371 5.36E-25 T 23-10-2018 IPR015947 PUA-like superfamily DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 SMART SM00359 281 364 6.3E-18 T 23-10-2018 IPR002478 PUA domain GO:0003723 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 SUPERFAMILY SSF53633 10 259 1.22E-69 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 4.4E-133 T 23-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 264 35.94 T 23-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DLM_4359 2351dd43dfe5bc0712e2adcdc6080638 372 Pfam PF00696 Amino acid kinase family 10 237 7.3E-44 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DLM_3715 b9632d5b88917ec66aa4da0e9cd7c7a9 196 Pfam PF02630 SCO1/SenC 35 174 2.2E-38 T 23-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3715 b9632d5b88917ec66aa4da0e9cd7c7a9 196 SUPERFAMILY SSF52833 39 195 1.32E-49 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3715 b9632d5b88917ec66aa4da0e9cd7c7a9 196 Gene3D G3DSA:3.40.30.10 34 195 1.5E-52 T 23-10-2018 DLM_2417 f351d70fbc4f96100ca90d51e4078f50 179 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 155 173 - T 23-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 DLM_2417 f351d70fbc4f96100ca90d51e4078f50 179 Gene3D G3DSA:3.30.1330.40 60 179 1.9E-40 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_2417 f351d70fbc4f96100ca90d51e4078f50 179 SUPERFAMILY SSF55298 74 178 3.3E-28 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_2417 f351d70fbc4f96100ca90d51e4078f50 179 Pfam PF01042 Endoribonuclease L-PSP 78 178 5.5E-25 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DLM_3993 70fb42e4748240b3435970a38fe4a67a 54 SUPERFAMILY SSF57802 1 53 5.89E-23 T 23-10-2018 DLM_3993 70fb42e4748240b3435970a38fe4a67a 54 Pfam PF00301 Rubredoxin 4 49 1.5E-21 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 DLM_3993 70fb42e4748240b3435970a38fe4a67a 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 23-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 DLM_3993 70fb42e4748240b3435970a38fe4a67a 54 PIRSF PIRSF000071 1 54 6.0E-26 T 23-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 DLM_3993 70fb42e4748240b3435970a38fe4a67a 54 PRINTS PR00163 Rubredoxin signature 3 19 9.4E-8 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 DLM_3993 70fb42e4748240b3435970a38fe4a67a 54 PRINTS PR00163 Rubredoxin signature 33 49 9.4E-8 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 DLM_3993 70fb42e4748240b3435970a38fe4a67a 54 Gene3D G3DSA:2.20.28.10 1 54 1.1E-26 T 23-10-2018 DLM_2037 5354e561d8b0dc10e2ba31fad4b95bf4 379 Pfam PF00296 Luciferase-like monooxygenase 1 323 6.9E-88 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DLM_2037 5354e561d8b0dc10e2ba31fad4b95bf4 379 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 376 78.274 T 23-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DLM_2037 5354e561d8b0dc10e2ba31fad4b95bf4 379 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 6.8E-188 T 23-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DLM_2037 5354e561d8b0dc10e2ba31fad4b95bf4 379 Gene3D G3DSA:3.20.20.30 1 358 2.2E-144 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_2037 5354e561d8b0dc10e2ba31fad4b95bf4 379 SUPERFAMILY SSF51679 1 350 8.11E-97 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_3948 fd698bde6de94f2f091775fabc04d523 152 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 2 150 32.781 T 23-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 DLM_3948 fd698bde6de94f2f091775fabc04d523 152 Gene3D G3DSA:3.30.70.140 2 98 2.3E-35 T 23-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily DLM_3948 fd698bde6de94f2f091775fabc04d523 152 SUPERFAMILY SSF57825 100 148 6.8E-15 T 23-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily DLM_3948 fd698bde6de94f2f091775fabc04d523 152 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 101 148 7.9E-19 T 23-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal DLM_3948 fd698bde6de94f2f091775fabc04d523 152 Gene3D G3DSA:2.30.30.20 99 150 6.7E-24 T 23-10-2018 DLM_3948 fd698bde6de94f2f091775fabc04d523 152 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 6 95 1.8E-31 T 23-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DLM_3948 fd698bde6de94f2f091775fabc04d523 152 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 6 148 2.5E-58 T 23-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 DLM_3948 fd698bde6de94f2f091775fabc04d523 152 SUPERFAMILY SSF54893 3 98 1.06E-33 T 23-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily DLM_3948 fd698bde6de94f2f091775fabc04d523 152 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 7 97 2.0E-42 T 23-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DLM_2399 3317bce42241f58eb13dbe66ce117028 100 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.5E-14 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.5E-14 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.5E-14 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 7.2E-45 T 23-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 SMART SM00411 3 92 4.0E-39 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 SUPERFAMILY SSF47729 3 94 3.24E-30 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 Pfam PF00216 Bacterial DNA-binding protein 3 91 6.0E-29 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 Gene3D G3DSA:4.10.520.10 1 98 1.8E-35 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.162 T 23-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DLM_2399 3317bce42241f58eb13dbe66ce117028 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 23-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DLM_1397 fb83f4fd28b6812c910b8e4951c92ae0 454 Gene3D G3DSA:1.20.1250.20 2 386 1.2E-81 T 23-10-2018 DLM_1397 fb83f4fd28b6812c910b8e4951c92ae0 454 SUPERFAMILY SSF103473 10 386 1.44E-60 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1397 fb83f4fd28b6812c910b8e4951c92ae0 454 Gene3D G3DSA:3.30.70.100 387 452 3.1E-5 T 23-10-2018 DLM_1397 fb83f4fd28b6812c910b8e4951c92ae0 454 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 80 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_1397 fb83f4fd28b6812c910b8e4951c92ae0 454 Pfam PF07690 Major Facilitator Superfamily 14 352 5.1E-45 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1713 f1e4397186991a0b9264ac662d50c8a7 349 SUPERFAMILY SSF56112 14 329 1.39E-55 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_1713 f1e4397186991a0b9264ac662d50c8a7 349 Pfam PF01636 Phosphotransferase enzyme family 35 251 3.6E-27 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase DLM_1713 f1e4397186991a0b9264ac662d50c8a7 349 Gene3D G3DSA:3.90.1200.10 123 317 1.0E-21 T 23-10-2018 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 42.26 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 1.2E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 1.2E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 1.2E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 1.2E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 1.2E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 1.2E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 23-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 Pfam PF00342 Phosphoglucose isomerase 49 539 5.1E-230 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 SUPERFAMILY SSF53697 3 546 2.06E-221 T 23-10-2018 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 23-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 Gene3D G3DSA:3.40.50.10490 95 289 8.1E-230 T 23-10-2018 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 Gene3D G3DSA:3.40.50.10490 10 504 8.1E-230 T 23-10-2018 DLM_4150 b420cf675b72a8e9c16a9cdac379a823 549 Gene3D G3DSA:1.10.1390.10 505 547 5.1E-20 T 23-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3792 05250e30ab6096d7d24bd3cc665f707b 261 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 127 155 - T 23-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DLM_3792 05250e30ab6096d7d24bd3cc665f707b 261 Pfam PF01464 Transglycosylase SLT domain 110 207 3.9E-27 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 DLM_3792 05250e30ab6096d7d24bd3cc665f707b 261 Gene3D G3DSA:1.10.530.10 100 234 8.3E-44 T 23-10-2018 DLM_3792 05250e30ab6096d7d24bd3cc665f707b 261 SUPERFAMILY SSF53955 94 227 3.85E-45 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 SUPERFAMILY SSF53271 65 301 2.02E-64 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 23-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 Gene3D G3DSA:3.40.50.2020 144 285 1.2E-130 T 23-10-2018 DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 309 48.498 T 23-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 308 8.7E-34 T 23-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 309 2.1E-122 T 23-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 Gene3D G3DSA:3.40.50.2020 3 297 1.2E-130 T 23-10-2018 DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 2 117 6.3E-47 T 23-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DLM_3410 d1ccdf4ce96aaf722e618097c597b39c 320 SMART SM01400 1 117 6.3E-73 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Gene3D G3DSA:3.30.70.1430 558 652 4.8E-300 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 SUPERFAMILY SSF82693 666 840 4.45E-9 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 SUPERFAMILY SSF82714 707 790 7.06E-17 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Gene3D G3DSA:3.30.70.1320 135 326 4.8E-300 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.5E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 SUPERFAMILY SSF82714 183 264 9.81E-17 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 SUPERFAMILY SSF82693 136 324 2.09E-22 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Gene3D G3DSA:3.30.70.1440 653 851 4.8E-300 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Gene3D G3DSA:3.30.70.1430 40 801 4.8E-300 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Pfam PF00873 AcrB/AcrD/AcrF family 6 1012 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Gene3D G3DSA:3.30.2090.10 179 269 4.8E-300 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 SUPERFAMILY SSF82693 556 652 4.97E-13 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 SUPERFAMILY SSF82866 290 490 8.5E-46 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Gene3D G3DSA:3.30.2090.10 705 793 4.8E-300 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Gene3D G3DSA:1.20.1640.10 10 503 4.8E-300 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 Gene3D G3DSA:1.20.1640.10 504 1009 4.8E-300 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 SUPERFAMILY SSF82866 817 1013 8.89E-44 T 23-10-2018 DLM_3526 07fafe0047770b2c5b4b7fd30f34bd99 1035 SUPERFAMILY SSF82693 40 129 2.46E-23 T 23-10-2018 DLM_0444 91ffce94217108541cf6f2de36523f31 355 Pfam PF01544 CorA-like Mg2+ transporter protein 63 351 7.8E-72 T 23-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DLM_0444 91ffce94217108541cf6f2de36523f31 355 SUPERFAMILY SSF143865 14 289 1.96E-75 T 23-10-2018 DLM_0444 91ffce94217108541cf6f2de36523f31 355 Gene3D G3DSA:1.20.58.340 166 277 1.0E-33 T 23-10-2018 DLM_0444 91ffce94217108541cf6f2de36523f31 355 Gene3D G3DSA:3.30.460.20 2 165 8.9E-44 T 23-10-2018 DLM_0444 91ffce94217108541cf6f2de36523f31 355 SUPERFAMILY SSF144083 290 352 3.53E-22 T 23-10-2018 DLM_0444 91ffce94217108541cf6f2de36523f31 355 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 56 355 7.6E-87 T 23-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 DLM_0444 91ffce94217108541cf6f2de36523f31 355 Gene3D G3DSA:1.20.58.340 278 355 1.2E-32 T 23-10-2018 DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 Pfam PF07729 FCD domain 97 217 4.1E-13 T 23-10-2018 IPR011711 GntR, C-terminal DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 Gene3D G3DSA:1.20.120.530 86 225 1.4E-14 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 SMART SM00895 93 218 3.3E-4 T 23-10-2018 IPR011711 GntR, C-terminal DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 SUPERFAMILY SSF46785 16 87 2.2E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 SMART SM00345 25 83 5.5E-16 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 Gene3D G3DSA:1.10.10.10 18 84 2.4E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 SUPERFAMILY SSF48008 90 224 1.05E-15 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 2.9E-17 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 2.2E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2790 e8434d04112f4d4f350d9d69d6942c31 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 2.2E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1956 351a2a14c2e178b5df3f53d30307be5d 114 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 102 6.7E-10 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DLM_1956 351a2a14c2e178b5df3f53d30307be5d 114 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 23-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DLM_1956 351a2a14c2e178b5df3f53d30307be5d 114 Gene3D G3DSA:3.10.20.30 1 113 8.6E-25 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_1956 351a2a14c2e178b5df3f53d30307be5d 114 SUPERFAMILY SSF54292 16 109 4.0E-14 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Gene3D G3DSA:3.30.450.20 222 357 4.4E-17 T 23-10-2018 DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Pfam PF13426 PAS domain 247 350 1.3E-9 T 23-10-2018 IPR000014 PAS domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Pfam PF13426 PAS domain 370 472 4.7E-14 T 23-10-2018 IPR000014 PAS domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Pfam PF00563 EAL domain 661 896 3.4E-74 T 23-10-2018 IPR001633 EAL domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Pfam PF00672 HAMP domain 157 204 3.5E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SMART SM00086 309 351 62.0 T 23-10-2018 IPR001610 PAC motif DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SMART SM00086 431 473 2.8E-5 T 23-10-2018 IPR001610 PAC motif DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SMART SM00052 655 901 1.3E-121 T 23-10-2018 IPR001633 EAL domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SUPERFAMILY SSF158472 158 207 2.09E-5 T 23-10-2018 DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Gene3D G3DSA:3.30.450.20 359 481 3.4E-35 T 23-10-2018 DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SUPERFAMILY SSF141868 660 908 8.76E-94 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SUPERFAMILY SSF55073 489 646 1.96E-49 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SMART SM00267 473 645 3.6E-67 T 23-10-2018 IPR000160 GGDEF domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 643 3.3E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Gene3D G3DSA:1.20.1480.50 108 214 4.8E-10 T 23-10-2018 DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 640 1.4E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Gene3D G3DSA:3.20.20.450 658 910 6.8E-104 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SMART SM00091 359 425 2.3E-8 T 23-10-2018 IPR000014 PAS domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SMART SM00091 236 302 5.4E-4 T 23-10-2018 IPR000014 PAS domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SMART SM00304 156 208 7.0E-4 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 363 479 3.3E-21 T 23-10-2018 IPR000014 PAS domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 232 357 2.4E-14 T 23-10-2018 IPR000014 PAS domain DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 PIRSF PIRSF005925 471 911 9.8E-152 T 23-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 PIRSF PIRSF005925 347 477 6.2E-14 T 23-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SUPERFAMILY SSF55785 221 349 7.41E-18 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 SUPERFAMILY SSF55785 364 471 3.14E-27 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0332 11c10367d8dbecac564bf23d3dc0a46b 915 Gene3D G3DSA:3.30.70.270 482 657 5.1E-58 T 23-10-2018 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 423 1.1E-137 T 23-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 23-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 23-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 428 33.458 T 23-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 SUPERFAMILY SSF55205 1 426 4.06E-134 T 23-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 PIRSF PIRSF000505 1 428 2.4E-146 T 23-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 Gene3D G3DSA:3.65.10.10 20 224 1.3E-65 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 Gene3D G3DSA:3.65.10.10 232 427 4.3E-73 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DLM_2811 054f9252d17bdc77eacec0b30fb10a5c 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 427 5.9E-141 T 23-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 SUPERFAMILY SSF51569 84 376 2.2E-96 T 23-10-2018 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 SMART SM00917 455 586 1.4E-39 T 23-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 SUPERFAMILY SSF110921 476 585 9.55E-24 T 23-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 97 113 - T 23-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 87 595 42.804 T 23-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 284 297 - T 23-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 Pfam PF08502 LeuA allosteric (dimerisation) domain 455 585 2.1E-35 T 23-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 Gene3D G3DSA:3.30.160.270 480 587 1.9E-11 T 23-10-2018 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 Gene3D G3DSA:1.10.238.260 365 479 9.3E-35 T 23-10-2018 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 89 583 2.6E-208 T 23-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 Pfam PF00682 HMGL-like 90 358 1.7E-96 T 23-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DLM_3729 b701798aebbb6786472e1d88825ae7a1 598 Gene3D G3DSA:3.20.20.70 87 361 3.9E-106 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Gene3D G3DSA:3.30.470.90 73 331 6.7E-93 T 23-10-2018 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SUPERFAMILY SSF52113 730 805 5.23E-19 T 23-10-2018 IPR036420 BRCT domain superfamily DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SUPERFAMILY SSF47781 432 623 8.01E-49 T 23-10-2018 IPR010994 RuvA domain 2-like DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Gene3D G3DSA:1.10.150.20 552 627 1.8E-19 T 23-10-2018 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Gene3D G3DSA:1.10.150.20 460 550 1.5E-19 T 23-10-2018 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SUPERFAMILY SSF50249 330 410 1.11E-27 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SMART SM00532 5 476 4.4E-256 T 23-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Gene3D G3DSA:2.40.50.140 332 414 5.1E-34 T 23-10-2018 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Hamap MF_01588 DNA ligase [ligA]. 4 803 53.578 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 331 6.6E-121 T 23-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 126 155 - T 23-10-2018 IPR018239 NAD-dependent DNA ligase, active site DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SMART SM00278 557 576 280.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SMART SM00278 474 493 110.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SMART SM00278 589 608 300.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 625 5.8E-201 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 730 802 2.5E-13 T 23-10-2018 IPR001357 BRCT domain DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 PIRSF PIRSF001604 636 808 2.4E-27 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 PIRSF PIRSF001604 1 642 4.1E-193 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 435 462 9.5E-13 T 23-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Pfam PF12826 Helix-hairpin-helix motif 555 616 9.3E-16 T 23-10-2018 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SMART SM00292 729 806 2.5E-14 T 23-10-2018 IPR001357 BRCT domain DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 335 410 2.3E-34 T 23-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 344 359 - T 23-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 SUPERFAMILY SSF56091 2 329 8.43E-113 T 23-10-2018 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Gene3D G3DSA:2.20.70.80 423 458 7.5E-16 T 23-10-2018 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Gene3D G3DSA:1.10.287.610 1 72 7.5E-28 T 23-10-2018 DLM_4538 18b6d702f04ef829a3bdd81242a872b5 808 Gene3D G3DSA:3.40.50.10190 714 806 4.4E-27 T 23-10-2018 IPR036420 BRCT domain superfamily DLM_1860 deab3a378678c0bbccfb8dc31fa59154 649 SMART SM00382 34 221 1.2E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1860 deab3a378678c0bbccfb8dc31fa59154 649 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1860 deab3a378678c0bbccfb8dc31fa59154 649 Pfam PF02687 FtsX-like permease family 555 642 3.2E-10 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DLM_1860 deab3a378678c0bbccfb8dc31fa59154 649 Pfam PF12704 MacB-like periplasmic core domain 274 492 5.4E-41 T 23-10-2018 IPR025857 MacB-like periplasmic core domain DLM_1860 deab3a378678c0bbccfb8dc31fa59154 649 Gene3D G3DSA:3.40.50.300 3 238 1.5E-68 T 23-10-2018 DLM_1860 deab3a378678c0bbccfb8dc31fa59154 649 SUPERFAMILY SSF52540 5 226 1.73E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1860 deab3a378678c0bbccfb8dc31fa59154 649 Pfam PF00005 ABC transporter 25 173 4.9E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0440 b3ecb32b3b6794b350f60a33f5e9b81c 159 Gene3D G3DSA:3.30.1330.50 1 158 6.8E-67 T 23-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DLM_0440 b3ecb32b3b6794b350f60a33f5e9b81c 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.474 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DLM_0440 b3ecb32b3b6794b350f60a33f5e9b81c 159 SUPERFAMILY SSF69765 1 157 2.22E-64 T 23-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DLM_0440 b3ecb32b3b6794b350f60a33f5e9b81c 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 23-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DLM_0440 b3ecb32b3b6794b350f60a33f5e9b81c 159 Pfam PF02542 YgbB family 2 155 4.2E-64 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DLM_0440 b3ecb32b3b6794b350f60a33f5e9b81c 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 156 8.7E-67 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 Gene3D G3DSA:3.40.190.290 94 289 2.1E-38 T 23-10-2018 DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 SUPERFAMILY SSF46785 4 115 3.22E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 Pfam PF03466 LysR substrate binding domain 91 287 1.1E-30 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 Gene3D G3DSA:1.10.10.10 7 89 4.7E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 4.2E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1939 6edff386ed9bc3a7775beb580ea7e5ee 305 SUPERFAMILY SSF53850 92 293 2.71E-34 T 23-10-2018 DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SMART SM00448 3 115 2.7E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SUPERFAMILY SSF55785 145 254 1.4E-6 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SMART SM00091 253 320 4.1E-8 T 23-10-2018 IPR000014 PAS domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Pfam PF13426 PAS domain 264 364 1.9E-11 T 23-10-2018 IPR000014 PAS domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Gene3D G3DSA:3.30.70.270 376 550 4.2E-59 T 23-10-2018 DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Pfam PF00563 EAL domain 553 786 2.7E-66 T 23-10-2018 IPR001633 EAL domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SMART SM00052 547 791 8.0E-105 T 23-10-2018 IPR001633 EAL domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Gene3D G3DSA:3.40.50.2300 2 124 2.0E-29 T 23-10-2018 DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SMART SM00267 366 537 3.3E-67 T 23-10-2018 IPR000160 GGDEF domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 532 3.6E-51 T 23-10-2018 IPR000160 GGDEF domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Pfam PF00072 Response regulator receiver domain 5 115 2.0E-19 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 251 1.8E-7 T 23-10-2018 IPR000014 PAS domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 373 1.0E-11 T 23-10-2018 IPR000014 PAS domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SUPERFAMILY SSF52172 4 143 6.69E-32 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Gene3D G3DSA:3.30.450.20 125 243 4.8E-8 T 23-10-2018 DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SUPERFAMILY SSF55785 264 373 2.27E-16 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SUPERFAMILY SSF141868 552 799 5.1E-82 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 534 4.7E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 SUPERFAMILY SSF55073 382 539 5.3E-51 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Gene3D G3DSA:3.20.20.450 551 804 1.2E-91 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2044 0866f5da5b604a5d88b7cb84b3b1586a 812 Gene3D G3DSA:3.30.450.20 255 375 2.9E-18 T 23-10-2018 DLM_1516 c86dfa00fe4868cb66fbeb990fce67b6 376 Gene3D G3DSA:3.40.50.300 28 296 7.0E-84 T 23-10-2018 DLM_1516 c86dfa00fe4868cb66fbeb990fce67b6 376 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1516 c86dfa00fe4868cb66fbeb990fce67b6 376 SUPERFAMILY SSF52540 30 268 4.95E-81 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1516 c86dfa00fe4868cb66fbeb990fce67b6 376 Pfam PF09383 NIL domain 297 351 7.3E-10 T 23-10-2018 IPR018449 NIL domain DLM_1516 c86dfa00fe4868cb66fbeb990fce67b6 376 Pfam PF00005 ABC transporter 50 198 7.3E-36 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1516 c86dfa00fe4868cb66fbeb990fce67b6 376 SMART SM00382 59 246 2.4E-17 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1516 c86dfa00fe4868cb66fbeb990fce67b6 376 SUPERFAMILY SSF55021 276 347 3.89E-6 T 23-10-2018 DLM_4441 1bc741e91df8a54b296ca549eb7b8635 383 SUPERFAMILY SSF53335 19 375 1.9E-89 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4441 1bc741e91df8a54b296ca549eb7b8635 383 Gene3D G3DSA:3.40.50.12710 3 383 1.8E-122 T 23-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 DLM_4441 1bc741e91df8a54b296ca549eb7b8635 383 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 78 311 6.5E-46 T 23-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 Gene3D G3DSA:3.30.360.10 128 235 3.2E-103 T 23-10-2018 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 23-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 35.475 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 PIRSF PIRSF000161 2 268 4.4E-91 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 126 1.3E-38 T 23-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 SUPERFAMILY SSF51735 4 267 4.95E-51 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 266 4.5E-97 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 SUPERFAMILY SSF55347 128 237 1.9E-38 T 23-10-2018 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 1.1E-43 T 23-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0719 d665101378b0c0d5a4c79ba22785b19e 268 Gene3D G3DSA:3.40.50.720 5 264 3.2E-103 T 23-10-2018 DLM_3456 57c82691b13ed347769581395695a7c9 260 Pfam PF00970 Oxidoreductase FAD-binding domain 18 100 1.8E-9 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DLM_3456 57c82691b13ed347769581395695a7c9 260 SUPERFAMILY SSF52343 105 258 2.62E-41 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3456 57c82691b13ed347769581395695a7c9 260 Gene3D G3DSA:2.40.30.10 1 98 9.5E-30 T 23-10-2018 DLM_3456 57c82691b13ed347769581395695a7c9 260 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 113 132 2.4E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3456 57c82691b13ed347769581395695a7c9 260 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 53 60 2.4E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3456 57c82691b13ed347769581395695a7c9 260 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 217 225 2.4E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3456 57c82691b13ed347769581395695a7c9 260 SUPERFAMILY SSF63380 6 101 9.68E-27 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_3456 57c82691b13ed347769581395695a7c9 260 Pfam PF00175 Oxidoreductase NAD-binding domain 114 231 8.0E-6 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DLM_3456 57c82691b13ed347769581395695a7c9 260 Gene3D G3DSA:3.40.50.80 102 256 6.4E-42 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_1354 3d23cff4444bb9ebdc770bc1b80491c1 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_1354 3d23cff4444bb9ebdc770bc1b80491c1 472 PIRSF PIRSF036492 1 472 1.3E-152 T 23-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DLM_1354 3d23cff4444bb9ebdc770bc1b80491c1 472 SUPERFAMILY SSF53720 4 444 4.84E-118 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_1354 3d23cff4444bb9ebdc770bc1b80491c1 472 Pfam PF00171 Aldehyde dehydrogenase family 4 441 2.9E-94 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_1354 3d23cff4444bb9ebdc770bc1b80491c1 472 Gene3D G3DSA:3.40.309.10 217 421 8.0E-149 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_1354 3d23cff4444bb9ebdc770bc1b80491c1 472 Gene3D G3DSA:3.40.605.10 23 441 8.0E-149 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_3212 7bfa76f38abeda7b3ec491563ecb64d2 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 316 1.9E-26 T 23-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DLM_3212 7bfa76f38abeda7b3ec491563ecb64d2 323 Pfam PF00005 ABC transporter 30 182 4.5E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3212 7bfa76f38abeda7b3ec491563ecb64d2 323 SMART SM00382 39 231 2.9E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3212 7bfa76f38abeda7b3ec491563ecb64d2 323 Gene3D G3DSA:3.40.50.300 1 323 5.8E-97 T 23-10-2018 DLM_3212 7bfa76f38abeda7b3ec491563ecb64d2 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 2.5E-18 T 23-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DLM_3212 7bfa76f38abeda7b3ec491563ecb64d2 323 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3212 7bfa76f38abeda7b3ec491563ecb64d2 323 SUPERFAMILY SSF52540 5 253 2.33E-70 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0899 57ac03a5595689b57f677dee9c2b57d3 500 Gene3D G3DSA:3.30.420.10 261 479 5.4E-57 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0899 57ac03a5595689b57f677dee9c2b57d3 500 Gene3D G3DSA:1.10.10.10 6 74 6.5E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0899 57ac03a5595689b57f677dee9c2b57d3 500 Pfam PF00665 Integrase core domain 274 393 1.5E-14 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_0899 57ac03a5595689b57f677dee9c2b57d3 500 SUPERFAMILY SSF46955 6 72 7.6E-11 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_0899 57ac03a5595689b57f677dee9c2b57d3 500 Pfam PF02316 Mu DNA-binding domain 18 134 3.5E-11 T 23-10-2018 IPR003314 Mu-type HTH domain GO:0003677 DLM_0899 57ac03a5595689b57f677dee9c2b57d3 500 SUPERFAMILY SSF53098 273 473 8.6E-52 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1171 b8da5b0ad8e4b9c63bd2e5edac313b2e 449 SMART SM00490 259 340 3.4E-36 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1171 b8da5b0ad8e4b9c63bd2e5edac313b2e 449 Gene3D G3DSA:3.40.50.300 218 381 5.9E-52 T 23-10-2018 DLM_1171 b8da5b0ad8e4b9c63bd2e5edac313b2e 449 Pfam PF00271 Helicase conserved C-terminal domain 235 340 4.1E-29 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1171 b8da5b0ad8e4b9c63bd2e5edac313b2e 449 Pfam PF00270 DEAD/DEAH box helicase 26 192 2.9E-48 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_1171 b8da5b0ad8e4b9c63bd2e5edac313b2e 449 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DLM_1171 b8da5b0ad8e4b9c63bd2e5edac313b2e 449 SMART SM00487 20 222 2.2E-57 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_1171 b8da5b0ad8e4b9c63bd2e5edac313b2e 449 Gene3D G3DSA:3.40.50.300 1 210 2.2E-78 T 23-10-2018 DLM_1171 b8da5b0ad8e4b9c63bd2e5edac313b2e 449 SUPERFAMILY SSF52540 72 362 2.87E-74 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 SUPERFAMILY SSF52374 3 650 3.05E-141 T 23-10-2018 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 845 5.3E-273 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 3.4E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 3.4E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 3.4E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 237 260 3.4E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 563 572 3.4E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 919 21.051 T 23-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 Pfam PF06827 Zinc finger found in FPG and IleRS 889 916 1.5E-6 T 23-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 Pfam PF08264 Anticodon-binding domain of tRNA 687 840 7.6E-21 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 Gene3D G3DSA:3.40.50.620 26 631 5.7E-234 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 642 5.9E-203 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 SUPERFAMILY SSF50677 202 401 9.73E-53 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 Gene3D G3DSA:3.90.740.10 193 406 5.7E-234 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 Gene3D G3DSA:1.10.730.20 642 920 4.1E-86 T 23-10-2018 DLM_3060 46ccd0939548c5428e1ee98f4c1fe7fd 928 SUPERFAMILY SSF47323 654 919 6.73E-65 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0017 2b9a78299584ca303c5ec14e3fdd5395 322 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 156 168 - T 23-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 DLM_0017 2b9a78299584ca303c5ec14e3fdd5395 322 SUPERFAMILY SSF56112 11 288 2.97E-53 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_0017 2b9a78299584ca303c5ec14e3fdd5395 322 Pfam PF00069 Protein kinase domain 19 282 6.4E-37 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DLM_0017 2b9a78299584ca303c5ec14e3fdd5395 322 Gene3D G3DSA:1.10.510.10 14 311 6.5E-50 T 23-10-2018 DLM_0017 2b9a78299584ca303c5ec14e3fdd5395 322 SMART SM00220 19 289 2.2E-35 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 Gene3D G3DSA:3.40.50.300 23 276 2.4E-107 T 23-10-2018 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 Gene3D G3DSA:3.40.50.300 16 378 2.4E-107 T 23-10-2018 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 SUPERFAMILY SSF54980 393 469 8.99E-17 T 23-10-2018 IPR035647 EF-G domain III/V-like DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 SUPERFAMILY SSF52540 12 278 9.33E-86 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 530 7.5E-246 T 23-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 155 5.0E-22 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 60 75 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 Pfam PF03144 Elongation factor Tu domain 2 315 379 1.3E-7 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 SUPERFAMILY SSF50447 262 392 6.63E-29 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 6 528 51.929 T 23-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 PRINTS PR00315 GTP-binding elongation factor signature 139 148 1.7E-10 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 PRINTS PR00315 GTP-binding elongation factor signature 17 30 1.7E-10 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 PRINTS PR00315 GTP-binding elongation factor signature 103 114 1.7E-10 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 PRINTS PR00315 GTP-binding elongation factor signature 67 75 1.7E-10 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 PRINTS PR00315 GTP-binding elongation factor signature 87 97 1.7E-10 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 Pfam PF00009 Elongation factor Tu GTP binding domain 16 278 3.8E-50 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 Gene3D G3DSA:3.30.70.3280 391 530 3.7E-49 T 23-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DLM_2004 589b2950228e18adcac739d3efd7f9d0 536 Pfam PF16658 Class II release factor RF3, C-terminal domain 388 515 7.7E-45 T 23-10-2018 IPR032090 Peptide chain release factor 3, C-terminal DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 Pfam PF12833 Helix-turn-helix domain 178 253 5.4E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 5.9E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 5.9E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 Pfam PF02311 AraC-like ligand binding domain 23 142 2.2E-10 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 SUPERFAMILY SSF51182 15 181 5.78E-19 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 SMART SM00342 172 254 3.3E-23 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 Gene3D G3DSA:2.60.120.10 7 91 1.7E-6 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 SUPERFAMILY SSF46689 209 253 4.93E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 Gene3D G3DSA:1.10.10.60 157 256 1.3E-21 T 23-10-2018 DLM_3552 bffd2a61ffcf64a5a1822b975abe7285 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 250 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 TIGRFAM TIGR00761 argB: acetylglutamate kinase 26 264 3.9E-75 T 23-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 PIRSF PIRSF000728 10 289 1.1E-106 T 23-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 Gene3D G3DSA:3.40.1160.10 2 290 1.6E-101 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 PRINTS PR01469 Bacterial carbamate kinase signature 56 75 7.2E-8 T 23-10-2018 DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 PRINTS PR01469 Bacterial carbamate kinase signature 189 204 7.2E-8 T 23-10-2018 DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 PRINTS PR01469 Bacterial carbamate kinase signature 239 254 7.2E-8 T 23-10-2018 DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 Hamap MF_00082 Acetylglutamate kinase [argB]. 24 282 50.412 T 23-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 SUPERFAMILY SSF53633 5 288 1.96E-93 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_4523 a12ab398b77c93e309cfd4bfadcc754b 290 Pfam PF00696 Amino acid kinase family 25 266 1.0E-45 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DLM_3037 a849495e582b5a43dd8b83f2978f9fb3 203 Gene3D G3DSA:1.20.1050.10 79 192 1.8E-75 T 23-10-2018 DLM_3037 a849495e582b5a43dd8b83f2978f9fb3 203 SUPERFAMILY SSF47616 69 201 1.39E-26 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_3037 a849495e582b5a43dd8b83f2978f9fb3 203 Gene3D G3DSA:3.40.30.10 2 195 1.8E-75 T 23-10-2018 DLM_3037 a849495e582b5a43dd8b83f2978f9fb3 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 4.1E-18 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_3037 a849495e582b5a43dd8b83f2978f9fb3 203 SUPERFAMILY SSF52833 1 100 1.97E-18 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3037 a849495e582b5a43dd8b83f2978f9fb3 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 120 188 5.2E-13 T 23-10-2018 DLM_2621 980d75f88415d08742512450534e432d 441 SMART SM00091 18 92 1.1 T 23-10-2018 IPR000014 PAS domain DLM_2621 980d75f88415d08742512450534e432d 441 SMART SM00091 141 211 0.31 T 23-10-2018 IPR000014 PAS domain DLM_2621 980d75f88415d08742512450534e432d 441 SMART SM00086 216 258 1.5E-5 T 23-10-2018 IPR001610 PAC motif DLM_2621 980d75f88415d08742512450534e432d 441 SMART SM00086 94 136 4.1E-6 T 23-10-2018 IPR001610 PAC motif DLM_2621 980d75f88415d08742512450534e432d 441 Gene3D G3DSA:3.30.450.20 7 142 3.2E-25 T 23-10-2018 DLM_2621 980d75f88415d08742512450534e432d 441 SUPERFAMILY SSF55785 153 255 3.22E-25 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2621 980d75f88415d08742512450534e432d 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 137 1.4E-13 T 23-10-2018 IPR000014 PAS domain DLM_2621 980d75f88415d08742512450534e432d 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 263 4.7E-15 T 23-10-2018 IPR000014 PAS domain DLM_2621 980d75f88415d08742512450534e432d 441 Pfam PF08447 PAS fold 42 129 3.6E-13 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2621 980d75f88415d08742512450534e432d 441 SUPERFAMILY SSF58104 247 435 1.16E-52 T 23-10-2018 DLM_2621 980d75f88415d08742512450534e432d 441 Gene3D G3DSA:1.10.287.950 249 439 6.0E-46 T 23-10-2018 DLM_2621 980d75f88415d08742512450534e432d 441 Pfam PF13426 PAS domain 157 257 3.3E-16 T 23-10-2018 IPR000014 PAS domain DLM_2621 980d75f88415d08742512450534e432d 441 SUPERFAMILY SSF55785 29 133 2.09E-23 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2621 980d75f88415d08742512450534e432d 441 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 276 435 1.4E-35 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2621 980d75f88415d08742512450534e432d 441 SMART SM00283 247 441 7.4E-19 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2621 980d75f88415d08742512450534e432d 441 Gene3D G3DSA:3.30.450.20 143 248 5.9E-14 T 23-10-2018 DLM_2518 f467dc43069e0f5d604ee42a74729077 244 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 133 153 - T 23-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DLM_2518 f467dc43069e0f5d604ee42a74729077 244 SUPERFAMILY SSF54534 89 196 1.69E-28 T 23-10-2018 DLM_2518 f467dc43069e0f5d604ee42a74729077 244 SUPERFAMILY SSF109998 2 105 3.92E-9 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily DLM_2518 f467dc43069e0f5d604ee42a74729077 244 Pfam PF13616 PPIC-type PPIASE domain 93 195 3.4E-25 T 23-10-2018 DLM_2518 f467dc43069e0f5d604ee42a74729077 244 Gene3D G3DSA:3.10.50.40 88 219 1.8E-30 T 23-10-2018 DLM_3345 3daa6f93205ceafec11d86912028cecb 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.1E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3345 3daa6f93205ceafec11d86912028cecb 305 Gene3D G3DSA:3.40.190.10 163 264 8.2E-72 T 23-10-2018 DLM_3345 3daa6f93205ceafec11d86912028cecb 305 SUPERFAMILY SSF53850 90 295 1.23E-48 T 23-10-2018 DLM_3345 3daa6f93205ceafec11d86912028cecb 305 Pfam PF03466 LysR substrate binding domain 90 291 4.3E-46 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3345 3daa6f93205ceafec11d86912028cecb 305 Gene3D G3DSA:3.40.190.10 95 290 8.2E-72 T 23-10-2018 DLM_3345 3daa6f93205ceafec11d86912028cecb 305 SUPERFAMILY SSF46785 5 111 2.23E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3345 3daa6f93205ceafec11d86912028cecb 305 Gene3D G3DSA:1.10.10.10 3 94 2.7E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 346 357 - T 23-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 Gene3D G3DSA:1.20.1440.230 331 431 2.8E-32 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 Gene3D G3DSA:3.10.20.600 236 330 1.0E-35 T 23-10-2018 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 Pfam PF10531 SLBB domain 247 295 1.2E-14 T 23-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 17 418 3.1E-198 T 23-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 335 416 5.3E-29 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 SMART SM00928 333 378 4.9E-26 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 SUPERFAMILY SSF140490 329 427 3.14E-36 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 Gene3D G3DSA:3.40.50.11540 57 234 1.2E-75 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 SUPERFAMILY SSF142984 245 328 5.62E-26 T 23-10-2018 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 SUPERFAMILY SSF142019 18 244 7.85E-83 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0054 1d0b4b4b1fcff94f111362d2c0070d76 431 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 52 223 1.1E-44 T 23-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_4336 3f7ad9482b31e396526642298d55f33b 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 254 8.5E-72 T 23-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DLM_4336 3f7ad9482b31e396526642298d55f33b 260 Gene3D G3DSA:3.60.10.10 1 256 4.2E-81 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DLM_4336 3f7ad9482b31e396526642298d55f33b 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 247 1.5E-17 T 23-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DLM_4336 3f7ad9482b31e396526642298d55f33b 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 23-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DLM_4336 3f7ad9482b31e396526642298d55f33b 260 SUPERFAMILY SSF56219 2 255 5.5E-73 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DLM_4336 3f7ad9482b31e396526642298d55f33b 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 252 2.6E-67 T 23-10-2018 DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 142 368 9.7E-76 T 23-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 Gene3D G3DSA:3.40.50.720 3 366 3.8E-140 T 23-10-2018 DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 138 1.1E-40 T 23-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 SMART SM01002 147 314 1.4E-84 T 23-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 Gene3D G3DSA:3.40.50.720 138 321 3.8E-140 T 23-10-2018 DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 SMART SM01003 4 138 4.4E-58 T 23-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 171 196 - T 23-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 SUPERFAMILY SSF52283 1 169 4.08E-49 T 23-10-2018 DLM_4116 113429706aa2ae57cd8d176996a89f8e 373 SUPERFAMILY SSF51735 138 320 9.87E-41 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 Gene3D G3DSA:3.40.50.300 134 272 3.5E-32 T 23-10-2018 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 Pfam PF14532 Sigma-54 interaction domain 136 273 6.2E-40 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 Pfam PF02954 Bacterial regulatory protein, Fis family 372 411 5.3E-6 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 SUPERFAMILY SSF46689 315 413 3.72E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 Gene3D G3DSA:1.10.8.60 273 351 1.5E-14 T 23-10-2018 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 SUPERFAMILY SSF52540 136 345 1.77E-30 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 Gene3D G3DSA:1.10.10.60 361 415 4.4E-14 T 23-10-2018 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 Gene3D G3DSA:3.40.50.2300 2 133 2.4E-36 T 23-10-2018 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 SMART SM00448 4 116 3.2E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 Pfam PF00072 Response regulator receiver domain 6 116 9.9E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4317 e08a3b09ae74316bc788d4959a8b0e81 422 SUPERFAMILY SSF52172 2 178 2.7E-40 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0584 e61e16beacbe83b6a953c384014668a4 472 Gene3D G3DSA:1.20.1250.20 262 455 1.3E-18 T 23-10-2018 DLM_0584 e61e16beacbe83b6a953c384014668a4 472 Pfam PF07690 Major Facilitator Superfamily 16 313 6.1E-40 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_0584 e61e16beacbe83b6a953c384014668a4 472 SUPERFAMILY SSF103473 10 452 1.28E-62 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0584 e61e16beacbe83b6a953c384014668a4 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 160 184 3.3E-9 T 23-10-2018 DLM_0584 e61e16beacbe83b6a953c384014668a4 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 3.3E-9 T 23-10-2018 DLM_0584 e61e16beacbe83b6a953c384014668a4 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.3E-9 T 23-10-2018 DLM_0584 e61e16beacbe83b6a953c384014668a4 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.3E-9 T 23-10-2018 DLM_0584 e61e16beacbe83b6a953c384014668a4 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.3E-9 T 23-10-2018 DLM_0584 e61e16beacbe83b6a953c384014668a4 472 Gene3D G3DSA:1.20.1720.10 13 217 1.1E-49 T 23-10-2018 DLM_0584 e61e16beacbe83b6a953c384014668a4 472 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 417 2.6E-76 T 23-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DLM_0356 7266b0773b768feda8d8772ca7753718 416 Gene3D G3DSA:4.10.320.10 111 152 5.2E-14 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DLM_0356 7266b0773b768feda8d8772ca7753718 416 Gene3D G3DSA:3.30.559.10 184 416 2.4E-94 T 23-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DLM_0356 7266b0773b768feda8d8772ca7753718 416 Gene3D G3DSA:2.40.50.100 2 101 1.4E-20 T 23-10-2018 DLM_0356 7266b0773b768feda8d8772ca7753718 416 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DLM_0356 7266b0773b768feda8d8772ca7753718 416 SUPERFAMILY SSF47005 112 149 1.07E-10 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DLM_0356 7266b0773b768feda8d8772ca7753718 416 SUPERFAMILY SSF51230 1 96 1.13E-25 T 23-10-2018 IPR011053 Single hybrid motif DLM_0356 7266b0773b768feda8d8772ca7753718 416 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 186 413 4.4E-81 T 23-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DLM_0356 7266b0773b768feda8d8772ca7753718 416 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 415 5.4E-168 T 23-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DLM_0356 7266b0773b768feda8d8772ca7753718 416 Pfam PF00364 Biotin-requiring enzyme 4 76 3.7E-19 T 23-10-2018 IPR000089 Biotin/lipoyl attachment DLM_0356 7266b0773b768feda8d8772ca7753718 416 SUPERFAMILY SSF52777 186 415 2.18E-88 T 23-10-2018 DLM_0356 7266b0773b768feda8d8772ca7753718 416 Pfam PF02817 e3 binding domain 113 146 3.0E-13 T 23-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 Gene3D G3DSA:1.10.10.60 406 467 2.9E-12 T 23-10-2018 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 447 467 1.8E-9 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 447 1.8E-9 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 184 197 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 SMART SM00382 180 325 2.2E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 Pfam PF00158 Sigma-54 interaction domain 161 328 2.5E-61 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 Gene3D G3DSA:3.40.50.300 146 331 5.7E-62 T 23-10-2018 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 Pfam PF02954 Bacterial regulatory protein, Fis family 427 463 8.4E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 SUPERFAMILY SSF52540 159 403 2.17E-66 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 SUPERFAMILY SSF55785 21 117 2.27E-10 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 SUPERFAMILY SSF46689 374 467 2.26E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 Gene3D G3DSA:3.30.450.20 16 118 3.3E-10 T 23-10-2018 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 247 262 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 Gene3D G3DSA:1.10.8.60 332 405 3.8E-20 T 23-10-2018 DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 374 383 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DLM_0180 ce814c7b2c00603923b15f83b0bd8cbe 471 Pfam PF08448 PAS fold 28 118 6.0E-7 T 23-10-2018 IPR013656 PAS fold-4 DLM_1988 f8d1cef15a8462fa53c9c0790be8ffb8 294 SUPERFAMILY SSF52540 72 279 1.09E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1988 f8d1cef15a8462fa53c9c0790be8ffb8 294 Gene3D G3DSA:2.40.50.140 2 57 3.0E-6 T 23-10-2018 DLM_1988 f8d1cef15a8462fa53c9c0790be8ffb8 294 Gene3D G3DSA:3.40.50.300 60 228 3.7E-38 T 23-10-2018 DLM_1988 f8d1cef15a8462fa53c9c0790be8ffb8 294 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 4 293 33.494 T 23-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DLM_1988 f8d1cef15a8462fa53c9c0790be8ffb8 294 Pfam PF03193 RsgA GTPase 58 228 1.9E-46 T 23-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DLM_1988 f8d1cef15a8462fa53c9c0790be8ffb8 294 Gene3D G3DSA:1.10.40.50 229 294 1.1E-19 T 23-10-2018 DLM_1988 f8d1cef15a8462fa53c9c0790be8ffb8 294 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 38 286 7.9E-63 T 23-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DLM_1988 f8d1cef15a8462fa53c9c0790be8ffb8 294 SUPERFAMILY SSF50249 5 60 7.97E-6 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2455 8e88747ac26d126d7ffbf2a34ae865a8 262 Pfam PF00290 Tryptophan synthase alpha chain 12 258 1.5E-86 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DLM_2455 8e88747ac26d126d7ffbf2a34ae865a8 262 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 46 59 - T 23-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DLM_2455 8e88747ac26d126d7ffbf2a34ae865a8 262 SUPERFAMILY SSF51366 1 247 6.44E-87 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DLM_2455 8e88747ac26d126d7ffbf2a34ae865a8 262 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 12 258 6.9E-75 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DLM_2455 8e88747ac26d126d7ffbf2a34ae865a8 262 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 12 260 34.134 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DLM_2455 8e88747ac26d126d7ffbf2a34ae865a8 262 Gene3D G3DSA:3.20.20.70 1 262 1.5E-97 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2389 de866a143a368666e5ca1dca682274c8 306 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 14 284 17.145 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DLM_2389 de866a143a368666e5ca1dca682274c8 306 Gene3D G3DSA:1.20.120.920 97 293 7.4E-86 T 23-10-2018 DLM_2389 de866a143a368666e5ca1dca682274c8 306 Pfam PF01867 CRISPR associated protein Cas1 130 240 2.2E-10 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DLM_2389 de866a143a368666e5ca1dca682274c8 306 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 9 275 8.1E-116 T 23-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 DLM_2389 de866a143a368666e5ca1dca682274c8 306 Gene3D G3DSA:3.100.10.20 4 96 2.2E-35 T 23-10-2018 DLM_2389 de866a143a368666e5ca1dca682274c8 306 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 134 275 1.1E-31 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DLM_1595 316e322373264cec6580eb12bb2fcc1c 1224 Pfam PF06744 Type VI secretion protein IcmF C-terminal 971 1167 1.2E-50 T 23-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal DLM_1595 316e322373264cec6580eb12bb2fcc1c 1224 SUPERFAMILY SSF52540 75 247 2.03E-12 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1595 316e322373264cec6580eb12bb2fcc1c 1224 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 2 512 1.1E-131 T 23-10-2018 IPR017731 Type VI secretion system, IcmF DLM_1595 316e322373264cec6580eb12bb2fcc1c 1224 Gene3D G3DSA:3.40.50.300 80 257 1.4E-6 T 23-10-2018 DLM_1595 316e322373264cec6580eb12bb2fcc1c 1224 Pfam PF14331 ImcF-related N-terminal domain 138 389 1.1E-74 T 23-10-2018 IPR025743 ImcF-related, N-terminal domain DLM_1595 316e322373264cec6580eb12bb2fcc1c 1224 Pfam PF06761 Intracellular multiplication and human macrophage-killing 445 841 7.1E-72 T 23-10-2018 IPR009612 ImcF-related DLM_0261 a6a46f2b02830a9bc2b1902c141098f2 655 Pfam PF02080 TrkA-C domain 590 652 4.1E-8 T 23-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DLM_0261 a6a46f2b02830a9bc2b1902c141098f2 655 SUPERFAMILY SSF51735 404 545 2.66E-31 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0261 a6a46f2b02830a9bc2b1902c141098f2 655 SUPERFAMILY SSF116726 584 650 3.4E-9 T 23-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DLM_0261 a6a46f2b02830a9bc2b1902c141098f2 655 Pfam PF02254 TrkA-N domain 408 521 5.2E-23 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DLM_0261 a6a46f2b02830a9bc2b1902c141098f2 655 Pfam PF00999 Sodium/hydrogen exchanger family 7 372 5.4E-66 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DLM_0261 a6a46f2b02830a9bc2b1902c141098f2 655 Gene3D G3DSA:1.20.1530.20 1 381 2.0E-84 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily DLM_0261 a6a46f2b02830a9bc2b1902c141098f2 655 Gene3D G3DSA:3.30.70.1450 583 654 3.7E-7 T 23-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DLM_0261 a6a46f2b02830a9bc2b1902c141098f2 655 Gene3D G3DSA:3.40.50.720 403 564 2.9E-35 T 23-10-2018 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 SUPERFAMILY SSF88946 43 151 1.7E-45 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 Pfam PF04542 Sigma-70 region 2 81 150 2.1E-19 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 Gene3D G3DSA:1.10.601.10 2 153 5.9E-52 T 23-10-2018 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 Gene3D G3DSA:1.10.10.10 154 230 1.8E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 Pfam PF04539 Sigma-70 region 3 161 234 3.4E-17 T 23-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 76 303 5.9E-34 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 315 38.567 T 23-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 Gene3D G3DSA:1.10.10.10 231 314 2.6E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 105 118 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 34 314 8.2E-141 T 23-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 SUPERFAMILY SSF88659 212 309 2.99E-21 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 274 300 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 PRINTS PR00046 Major sigma-70 factor signature 289 300 7.3E-22 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 PRINTS PR00046 Major sigma-70 factor signature 253 265 7.3E-22 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 PRINTS PR00046 Major sigma-70 factor signature 274 289 7.3E-22 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 PRINTS PR00046 Major sigma-70 factor signature 105 118 7.3E-22 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 PRINTS PR00046 Major sigma-70 factor signature 129 137 7.3E-22 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 Pfam PF00140 Sigma-70 factor, region 1.2 43 75 8.8E-11 T 23-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 SUPERFAMILY SSF88659 154 227 2.35E-13 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_3316 83aabd692a14c19ad1993fb7adcfdf13 315 Pfam PF04545 Sigma-70, region 4 249 302 1.4E-13 T 23-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1116 1143 - T 23-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 Pfam PF00384 Molybdopterin oxidoreductase 108 823 1.7E-157 T 23-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 SUPERFAMILY SSF53706 3 1066 0.0 T 23-10-2018 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 SUPERFAMILY SSF50692 1073 1227 1.97E-45 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 Pfam PF01568 Molydopterin dinucleotide binding domain 1078 1193 5.5E-22 T 23-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 23-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1226 0.0 T 23-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 Gene3D G3DSA:3.40.50.12440 44 1233 0.0 T 23-10-2018 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.8E-17 T 23-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DLM_2727 4fe51617147420f4c54d672aa5e6cffe 1233 SMART SM00926 43 105 1.6E-8 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0569 3bae64f3cbfa3b7a374b693689f3ac98 427 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 397 8.2E-119 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DLM_0569 3bae64f3cbfa3b7a374b693689f3ac98 427 Gene3D G3DSA:3.30.413.10 292 409 5.9E-36 T 23-10-2018 DLM_0569 3bae64f3cbfa3b7a374b693689f3ac98 427 PIRSF PIRSF004640 1 407 9.6E-129 T 23-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DLM_0569 3bae64f3cbfa3b7a374b693689f3ac98 427 Gene3D G3DSA:3.20.20.20 4 291 5.7E-98 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_0569 3bae64f3cbfa3b7a374b693689f3ac98 427 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 6 400 30.082 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DLM_0569 3bae64f3cbfa3b7a374b693689f3ac98 427 SUPERFAMILY SSF56014 297 393 2.35E-8 T 23-10-2018 DLM_0569 3bae64f3cbfa3b7a374b693689f3ac98 427 Pfam PF04551 GcpE protein 11 398 6.6E-114 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DLM_0499 d56031a86c02577611f6482dfeda5580 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 23-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 Gene3D G3DSA:1.10.520.10 433 723 6.7E-145 T 23-10-2018 DLM_0499 d56031a86c02577611f6482dfeda5580 724 Gene3D G3DSA:1.10.420.10 578 699 6.7E-145 T 23-10-2018 DLM_0499 d56031a86c02577611f6482dfeda5580 724 Gene3D G3DSA:1.10.420.20 191 399 1.3E-217 T 23-10-2018 DLM_0499 d56031a86c02577611f6482dfeda5580 724 SUPERFAMILY SSF48113 17 431 6.04E-153 T 23-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 SUPERFAMILY SSF48113 432 723 1.92E-111 T 23-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 Pfam PF00141 Peroxidase 68 398 5.0E-51 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 Pfam PF00141 Peroxidase 406 698 1.5E-37 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DLM_0499 d56031a86c02577611f6482dfeda5580 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.073 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 2.2E-53 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 2.2E-53 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 2.2E-53 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 2.2E-53 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 2.2E-53 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 5.5E-18 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 5.5E-18 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 5.5E-18 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 5.5E-18 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 5.5E-18 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DLM_0499 d56031a86c02577611f6482dfeda5580 724 Gene3D G3DSA:1.10.520.10 22 432 1.3E-217 T 23-10-2018 DLM_0024 f959762b829157641ca36c71d2275dbe 630 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 527 556 7.8E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0024 f959762b829157641ca36c71d2275dbe 630 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 498 525 7.8E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0024 f959762b829157641ca36c71d2275dbe 630 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 7.8E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0024 f959762b829157641ca36c71d2275dbe 630 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 466 625 1.2E-31 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0024 f959762b829157641ca36c71d2275dbe 630 SMART SM00897 12 234 3.7E-38 T 23-10-2018 IPR013702 FIST domain, N-terminal DLM_0024 f959762b829157641ca36c71d2275dbe 630 SMART SM00283 407 619 2.8E-13 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0024 f959762b829157641ca36c71d2275dbe 630 Pfam PF10442 FIST C domain 242 364 2.4E-12 T 23-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DLM_0024 f959762b829157641ca36c71d2275dbe 630 SMART SM01204 240 367 1.0E-22 T 23-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DLM_0024 f959762b829157641ca36c71d2275dbe 630 Gene3D G3DSA:1.10.287.950 409 628 4.2E-42 T 23-10-2018 DLM_0024 f959762b829157641ca36c71d2275dbe 630 Pfam PF08495 FIST N domain 14 222 4.2E-20 T 23-10-2018 IPR013702 FIST domain, N-terminal DLM_0024 f959762b829157641ca36c71d2275dbe 630 SUPERFAMILY SSF58104 411 625 4.84E-46 T 23-10-2018 DLM_0466 f6877cc8b47e22c50b8ea5a9396d7de2 290 Pfam PF00561 alpha/beta hydrolase fold 30 276 4.0E-24 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_0466 f6877cc8b47e22c50b8ea5a9396d7de2 290 SUPERFAMILY SSF53474 3 289 1.74E-50 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0466 f6877cc8b47e22c50b8ea5a9396d7de2 290 Gene3D G3DSA:3.40.50.1820 7 285 2.2E-57 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0466 f6877cc8b47e22c50b8ea5a9396d7de2 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 1.5E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_0466 f6877cc8b47e22c50b8ea5a9396d7de2 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 1.5E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_0466 f6877cc8b47e22c50b8ea5a9396d7de2 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 1.5E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 Gene3D G3DSA:3.40.50.300 1 214 3.4E-16 T 23-10-2018 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 Pfam PF07085 DRTGG domain 214 325 5.9E-28 T 23-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 SUPERFAMILY SSF53659 372 689 2.96E-94 T 23-10-2018 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 Gene3D G3DSA:3.40.50.10950 377 689 6.3E-135 T 23-10-2018 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 Pfam PF13500 AAA domain 2 210 1.7E-28 T 23-10-2018 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 386 686 2.3E-129 T 23-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 Gene3D G3DSA:3.40.1390.20 215 325 7.8E-6 T 23-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 Gene3D G3DSA:3.40.50.10750 509 662 6.3E-135 T 23-10-2018 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 Pfam PF01515 Phosphate acetyl/butaryl transferase 371 686 9.2E-125 T 23-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 PIRSF PIRSF006107 1 692 0.0 T 23-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 SUPERFAMILY SSF52540 1 220 1.23E-24 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1458 eb56a62b6548ee9773af3168ba54ecf5 692 SUPERFAMILY SSF75138 210 333 6.28E-24 T 23-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DLM_1983 53dfaf68384180177fadb22831c6ea11 167 Gene3D G3DSA:3.90.950.20 1 161 9.8E-61 T 23-10-2018 IPR036653 CinA-like, C-terminal DLM_1983 53dfaf68384180177fadb22831c6ea11 167 Pfam PF02464 Competence-damaged protein 8 159 3.0E-59 T 23-10-2018 IPR008136 CinA, C-terminal DLM_1983 53dfaf68384180177fadb22831c6ea11 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 157 7.9E-54 T 23-10-2018 IPR008136 CinA, C-terminal DLM_1983 53dfaf68384180177fadb22831c6ea11 167 SUPERFAMILY SSF142433 4 160 6.15E-57 T 23-10-2018 IPR036653 CinA-like, C-terminal DLM_0580 e280fd25c1091d47f1a76489569a2b72 349 SUPERFAMILY SSF51735 2 189 1.43E-45 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0580 e280fd25c1091d47f1a76489569a2b72 349 Gene3D G3DSA:3.30.360.10 127 328 1.3E-123 T 23-10-2018 DLM_0580 e280fd25c1091d47f1a76489569a2b72 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 121 1.2E-24 T 23-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DLM_0580 e280fd25c1091d47f1a76489569a2b72 349 Gene3D G3DSA:3.40.50.720 8 316 1.3E-123 T 23-10-2018 DLM_0580 e280fd25c1091d47f1a76489569a2b72 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 215 1.5E-11 T 23-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DLM_0682 9b9290bbb96583ad46bb02270e32574c 185 PIRSF PIRSF001467 10 183 1.4E-28 T 23-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DLM_0682 9b9290bbb96583ad46bb02270e32574c 185 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 23-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DLM_0682 9b9290bbb96583ad46bb02270e32574c 185 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 181 2.4E-47 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DLM_0682 9b9290bbb96583ad46bb02270e32574c 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 154 4.3E-11 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DLM_0682 9b9290bbb96583ad46bb02270e32574c 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 4.3E-11 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DLM_0682 9b9290bbb96583ad46bb02270e32574c 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 4.3E-11 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DLM_0682 9b9290bbb96583ad46bb02270e32574c 185 SUPERFAMILY SSF50891 20 183 1.46E-55 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily DLM_0682 9b9290bbb96583ad46bb02270e32574c 185 Gene3D G3DSA:2.40.100.10 19 184 5.6E-65 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.3E-128 T 23-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 8.5E-33 T 23-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 SUPERFAMILY SSF50104 127 272 2.41E-59 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 Gene3D G3DSA:2.30.30.30 118 196 1.3E-31 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 PIRSF PIRSF002158 10 275 4.0E-97 T 23-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 SUPERFAMILY SSF50249 3 125 8.23E-46 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.163 T 23-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.3E-54 T 23-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 Gene3D G3DSA:2.40.50.140 1 114 6.5E-46 T 23-10-2018 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 SMART SM01383 42 118 1.6E-42 T 23-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 Gene3D G3DSA:4.10.950.10 197 274 2.4E-35 T 23-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4394 a44f89ca3bdccf958d1ea1c972e428c7 277 SMART SM01382 124 252 4.4E-88 T 23-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 1.8E-78 T 23-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 Gene3D G3DSA:3.40.50.720 1 181 2.5E-82 T 23-10-2018 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 SUPERFAMILY SSF51735 1 182 5.8E-79 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 PIRSF PIRSF000116 3 206 1.1E-48 T 23-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 PIRSF PIRSF000116 201 332 1.4E-13 T 23-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 45.506 T 23-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 1.3E-136 T 23-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 Gene3D G3DSA:1.10.3730.40 182 338 3.4E-72 T 23-10-2018 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 5.6E-63 T 23-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DLM_3731 3bc98d911fde4fc7adf5385cf4108ad4 338 SUPERFAMILY SSF48179 183 332 4.93E-69 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_2038 858e0abb46e377913111c83c187daecf 311 Gene3D G3DSA:1.10.8.450 238 271 1.7E-108 T 23-10-2018 DLM_2038 858e0abb46e377913111c83c187daecf 311 Gene3D G3DSA:3.40.190.10 107 206 1.7E-108 T 23-10-2018 DLM_2038 858e0abb46e377913111c83c187daecf 311 Gene3D G3DSA:3.40.190.10 27 302 1.7E-108 T 23-10-2018 DLM_2038 858e0abb46e377913111c83c187daecf 311 Pfam PF09084 NMT1/THI5 like 56 233 6.4E-15 T 23-10-2018 IPR015168 SsuA/THI5-like DLM_2038 858e0abb46e377913111c83c187daecf 311 SMART SM00062 26 244 4.1E-16 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2038 858e0abb46e377913111c83c187daecf 311 SUPERFAMILY SSF53850 38 252 1.41E-50 T 23-10-2018 DLM_2038 858e0abb46e377913111c83c187daecf 311 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 28 309 1.7E-69 T 23-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DLM_1355 a0de3170c7e9b08c7d246db61642b8c1 225 Pfam PF01965 DJ-1/PfpI family 25 222 6.5E-14 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DLM_1355 a0de3170c7e9b08c7d246db61642b8c1 225 SUPERFAMILY SSF52317 1 224 3.3E-75 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1355 a0de3170c7e9b08c7d246db61642b8c1 225 Gene3D G3DSA:3.40.50.880 1 224 8.8E-80 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1233 406bdc595361af76138e999045c9bcee 522 SUPERFAMILY SSF50341 27 163 1.57E-30 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 Gene3D G3DSA:2.30.30.40 373 500 1.9E-35 T 23-10-2018 DLM_1233 406bdc595361af76138e999045c9bcee 522 Gene3D G3DSA:2.40.50.180 215 334 3.7E-27 T 23-10-2018 DLM_1233 406bdc595361af76138e999045c9bcee 522 Gene3D G3DSA:2.40.50.180 390 501 1.9E-35 T 23-10-2018 DLM_1233 406bdc595361af76138e999045c9bcee 522 Pfam PF01584 CheW-like domain 371 508 2.7E-33 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 Pfam PF01584 CheW-like domain 198 338 1.4E-28 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 Pfam PF01584 CheW-like domain 29 163 1.6E-31 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 SUPERFAMILY SSF50341 368 508 4.71E-34 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 SUPERFAMILY SSF50341 189 339 2.09E-29 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 Gene3D G3DSA:2.40.50.180 47 156 1.2E-30 T 23-10-2018 DLM_1233 406bdc595361af76138e999045c9bcee 522 SMART SM00260 24 161 6.3E-23 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 SMART SM00260 367 506 1.8E-33 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 SMART SM00260 194 335 1.1E-30 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1233 406bdc595361af76138e999045c9bcee 522 Gene3D G3DSA:2.30.30.40 30 155 1.2E-30 T 23-10-2018 DLM_1233 406bdc595361af76138e999045c9bcee 522 Gene3D G3DSA:2.30.30.40 200 329 3.7E-27 T 23-10-2018 DLM_3096 83e53f740c6e45c760a352ec363cd000 292 Gene3D G3DSA:3.40.50.300 57 192 6.2E-10 T 23-10-2018 DLM_3096 83e53f740c6e45c760a352ec363cd000 292 SUPERFAMILY SSF52540 61 259 5.9E-23 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3096 83e53f740c6e45c760a352ec363cd000 292 Pfam PF05673 Protein of unknown function (DUF815) 33 281 4.1E-104 T 23-10-2018 IPR008533 Domain of unknown function DUF815 DLM_2165 afc8821afce5b184f31d4a1b6ad5e173 277 SUPERFAMILY SSF51735 108 251 9.63E-28 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2165 afc8821afce5b184f31d4a1b6ad5e173 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 13 94 7.8E-16 T 23-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DLM_2165 afc8821afce5b184f31d4a1b6ad5e173 277 Gene3D G3DSA:3.40.50.10860 6 107 8.5E-66 T 23-10-2018 DLM_2165 afc8821afce5b184f31d4a1b6ad5e173 277 Gene3D G3DSA:3.40.50.720 108 247 8.5E-66 T 23-10-2018 DLM_2165 afc8821afce5b184f31d4a1b6ad5e173 277 SUPERFAMILY SSF53223 2 105 1.04E-22 T 23-10-2018 DLM_2165 afc8821afce5b184f31d4a1b6ad5e173 277 Pfam PF00899 ThiF family 122 159 1.7E-5 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DLM_0834 3eea76866d30b341ab00b56ab2cf0fb8 308 SUPERFAMILY SSF110581 5 303 5.1E-116 T 23-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DLM_0834 3eea76866d30b341ab00b56ab2cf0fb8 308 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 11 305 44.006 T 23-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DLM_0834 3eea76866d30b341ab00b56ab2cf0fb8 308 Pfam PF04227 Indigoidine synthase A like protein 12 301 9.9E-134 T 23-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DLM_0834 3eea76866d30b341ab00b56ab2cf0fb8 308 Gene3D G3DSA:3.40.1790.10 3 306 1.2E-138 T 23-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DLM_0456 d1b16c5603c8984aef462de763e610ca 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_0456 d1b16c5603c8984aef462de763e610ca 617 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 45.045 T 23-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_0456 d1b16c5603c8984aef462de763e610ca 617 Pfam PF00920 Dehydratase family 34 608 1.2E-220 T 23-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_0456 d1b16c5603c8984aef462de763e610ca 617 SUPERFAMILY SSF52016 422 613 3.69E-60 T 23-10-2018 DLM_0456 d1b16c5603c8984aef462de763e610ca 617 Gene3D G3DSA:3.50.30.80 422 573 9.5E-55 T 23-10-2018 DLM_0456 d1b16c5603c8984aef462de763e610ca 617 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 7.7E-256 T 23-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_0456 d1b16c5603c8984aef462de763e610ca 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 510 521 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_0456 d1b16c5603c8984aef462de763e610ca 617 SUPERFAMILY SSF143975 4 421 9.42E-135 T 23-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_3404 e17b112a859c4f5478f75a8740653487 450 Gene3D G3DSA:1.10.287.1120 166 432 4.0E-60 T 23-10-2018 DLM_3404 e17b112a859c4f5478f75a8740653487 450 SUPERFAMILY SSF116734 218 441 1.46E-33 T 23-10-2018 DLM_3404 e17b112a859c4f5478f75a8740653487 450 Gene3D G3DSA:3.90.220.20 16 436 4.0E-60 T 23-10-2018 DLM_3404 e17b112a859c4f5478f75a8740653487 450 SUPERFAMILY SSF116734 7 218 8.5E-30 T 23-10-2018 DLM_3404 e17b112a859c4f5478f75a8740653487 450 Pfam PF01420 Type I restriction modification DNA specificity domain 301 395 8.5E-5 T 23-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DLM_3404 e17b112a859c4f5478f75a8740653487 450 Pfam PF01420 Type I restriction modification DNA specificity domain 106 188 2.8E-4 T 23-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DLM_3404 e17b112a859c4f5478f75a8740653487 450 Gene3D G3DSA:3.90.220.20 238 385 4.0E-60 T 23-10-2018 DLM_0219 96574850e87f9c6186e032eeb0abdf56 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 30 269 4.2E-76 T 23-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DLM_0219 96574850e87f9c6186e032eeb0abdf56 274 Gene3D G3DSA:3.10.20.10 36 121 2.8E-8 T 23-10-2018 DLM_0219 96574850e87f9c6186e032eeb0abdf56 274 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 270 33.611 T 23-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DLM_0219 96574850e87f9c6186e032eeb0abdf56 274 Pfam PF02634 FdhD/NarQ family 35 269 1.2E-70 T 23-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DLM_0219 96574850e87f9c6186e032eeb0abdf56 274 PIRSF PIRSF015626 6 273 1.1E-77 T 23-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DLM_0219 96574850e87f9c6186e032eeb0abdf56 274 Gene3D G3DSA:3.40.140.10 126 274 1.9E-48 T 23-10-2018 DLM_0219 96574850e87f9c6186e032eeb0abdf56 274 SUPERFAMILY SSF53927 18 269 1.26E-77 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DLM_0103 b88a5ebb05f47a2f5e373a49a24325c5 297 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 35 50 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_0103 b88a5ebb05f47a2f5e373a49a24325c5 297 Gene3D G3DSA:3.20.20.20 12 295 7.2E-107 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_0103 b88a5ebb05f47a2f5e373a49a24325c5 297 SUPERFAMILY SSF51717 21 294 8.11E-97 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_0103 b88a5ebb05f47a2f5e373a49a24325c5 297 Pfam PF00809 Pterin binding enzyme 36 277 1.5E-82 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_0103 b88a5ebb05f47a2f5e373a49a24325c5 297 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 69 82 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_0103 b88a5ebb05f47a2f5e373a49a24325c5 297 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 34 292 6.4E-95 T 23-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 DLM_0454 5fcfeea6981b4bd7da29623eb8ef7df6 282 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 25 282 5.3E-113 T 23-10-2018 IPR030836 Putative ABC transporter periplasmic binding protein PhnD-like DLM_0454 5fcfeea6981b4bd7da29623eb8ef7df6 282 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 241 9.7E-74 T 23-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DLM_0454 5fcfeea6981b4bd7da29623eb8ef7df6 282 Gene3D G3DSA:3.40.190.10 29 249 2.2E-66 T 23-10-2018 DLM_0454 5fcfeea6981b4bd7da29623eb8ef7df6 282 Gene3D G3DSA:3.40.190.10 108 216 2.2E-66 T 23-10-2018 DLM_0454 5fcfeea6981b4bd7da29623eb8ef7df6 282 SUPERFAMILY SSF53850 46 232 2.38E-42 T 23-10-2018 DLM_0454 5fcfeea6981b4bd7da29623eb8ef7df6 282 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 268 2.1E-72 T 23-10-2018 DLM_0454 5fcfeea6981b4bd7da29623eb8ef7df6 282 SMART SM00062 25 258 9.2E-4 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 461 4.8E-53 T 23-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 Gene3D G3DSA:1.10.45.10 422 462 2.1E-16 T 23-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 Gene3D G3DSA:3.30.70.2190 217 333 1.9E-26 T 23-10-2018 DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 Gene3D G3DSA:3.30.465.10 95 215 1.5E-39 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 Gene3D G3DSA:3.30.43.10 1 93 6.1E-24 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 SUPERFAMILY SSF55103 190 461 6.05E-57 T 23-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 Pfam PF01565 FAD binding domain 42 179 1.6E-36 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 Gene3D G3DSA:3.30.70.2740 336 421 2.5E-24 T 23-10-2018 DLM_2453 8f53a09c6ef76508d76ef425ac73ef95 463 SUPERFAMILY SSF56176 6 217 2.99E-68 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_4420 dbc0d5ca166cfc93974a847f802ad59d 492 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 456 3.2E-46 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4420 dbc0d5ca166cfc93974a847f802ad59d 492 SUPERFAMILY SSF58104 197 492 7.94E-69 T 23-10-2018 DLM_4420 dbc0d5ca166cfc93974a847f802ad59d 492 SMART SM00283 230 491 3.5E-71 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4420 dbc0d5ca166cfc93974a847f802ad59d 492 Gene3D G3DSA:1.10.287.950 171 492 4.2E-69 T 23-10-2018 DLM_4420 dbc0d5ca166cfc93974a847f802ad59d 492 SMART SM01049 1 76 9.3E-15 T 23-10-2018 IPR033480 Single Cache domain 2 DLM_4420 dbc0d5ca166cfc93974a847f802ad59d 492 Pfam PF17200 Single Cache domain 2 1 135 3.7E-29 T 23-10-2018 IPR033480 Single Cache domain 2 DLM_4420 dbc0d5ca166cfc93974a847f802ad59d 492 Gene3D G3DSA:3.30.450.20 1 138 3.7E-39 T 23-10-2018 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 SUPERFAMILY SSF51905 5 433 1.43E-78 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 PIRSF PIRSF000171 1 576 1.6E-45 T 23-10-2018 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 23-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 590 2.7E-240 T 23-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 590 1.5E-279 T 23-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 Gene3D G3DSA:1.20.58.100 427 542 2.1E-34 T 23-10-2018 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 Gene3D G3DSA:3.90.700.10 246 349 2.5E-167 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 Gene3D G3DSA:4.10.80.40 550 590 2.3E-8 T 23-10-2018 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 SUPERFAMILY SSF56425 236 354 2.09E-44 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.4E-5 T 23-10-2018 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 384 2.4E-5 T 23-10-2018 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 Gene3D G3DSA:3.50.50.60 9 409 2.5E-167 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 SUPERFAMILY SSF46977 448 590 1.31E-40 T 23-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 Pfam PF00890 FAD binding domain 9 399 6.6E-124 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0350 0c47c7d0f0fa0582269f1d4f14e4eecb 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 455 590 1.2E-38 T 23-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_1361 af7fba0f936f8d36990f58bdb6f42764 243 PIRSF PIRSF039085 1 243 3.7E-110 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DLM_1361 af7fba0f936f8d36990f58bdb6f42764 243 SUPERFAMILY SSF52540 3 238 1.16E-77 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1361 af7fba0f936f8d36990f58bdb6f42764 243 Pfam PF00005 ABC transporter 19 168 9.4E-36 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1361 af7fba0f936f8d36990f58bdb6f42764 243 Gene3D G3DSA:3.40.50.300 2 243 9.5E-79 T 23-10-2018 DLM_1361 af7fba0f936f8d36990f58bdb6f42764 243 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1361 af7fba0f936f8d36990f58bdb6f42764 243 SMART SM00382 28 216 2.9E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3048 b7b90deab858a412496d64912580537a 176 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 16 169 8.4E-62 T 23-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DLM_3048 b7b90deab858a412496d64912580537a 176 Gene3D G3DSA:1.10.3330.10 5 174 1.6E-60 T 23-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DLM_3048 b7b90deab858a412496d64912580537a 176 Pfam PF09349 OHCU decarboxylase 11 167 5.3E-47 T 23-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DLM_3048 b7b90deab858a412496d64912580537a 176 SUPERFAMILY SSF158694 6 170 8.11E-54 T 23-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DLM_2736 9322fd50aa93071343e53161d78c4171 634 Gene3D G3DSA:1.20.1480.50 158 249 1.5E-6 T 23-10-2018 DLM_2736 9322fd50aa93071343e53161d78c4171 634 Pfam PF13185 GAF domain 276 414 1.3E-11 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_2736 9322fd50aa93071343e53161d78c4171 634 SUPERFAMILY SSF55781 256 419 3.49E-17 T 23-10-2018 DLM_2736 9322fd50aa93071343e53161d78c4171 634 SMART SM00065 277 423 1.8E-5 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_2736 9322fd50aa93071343e53161d78c4171 634 SMART SM00304 190 242 1.7E-13 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2736 9322fd50aa93071343e53161d78c4171 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 629 4.7E-9 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2736 9322fd50aa93071343e53161d78c4171 634 Pfam PF00672 HAMP domain 192 239 4.1E-10 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2736 9322fd50aa93071343e53161d78c4171 634 Gene3D G3DSA:3.30.565.10 498 628 2.8E-27 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2736 9322fd50aa93071343e53161d78c4171 634 PIRSF PIRSF003167 1 634 2.2E-189 T 23-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 DLM_2736 9322fd50aa93071343e53161d78c4171 634 SMART SM00387 535 630 4.7E-13 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2736 9322fd50aa93071343e53161d78c4171 634 Pfam PF07730 Histidine kinase 430 495 9.7E-16 T 23-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DLM_2736 9322fd50aa93071343e53161d78c4171 634 Gene3D G3DSA:1.20.120.960 43 157 2.6E-12 T 23-10-2018 DLM_2736 9322fd50aa93071343e53161d78c4171 634 SUPERFAMILY SSF158472 192 240 3.27E-9 T 23-10-2018 DLM_2736 9322fd50aa93071343e53161d78c4171 634 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 37 131 3.2E-19 T 23-10-2018 IPR029095 NarX-like, N-terminal DLM_2736 9322fd50aa93071343e53161d78c4171 634 SUPERFAMILY SSF55874 501 627 3.67E-17 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2736 9322fd50aa93071343e53161d78c4171 634 Gene3D G3DSA:3.30.450.40 251 426 1.3E-20 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_3981 15add4773da1b04365c0a0523bf848a6 323 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 6 316 6.4E-117 T 23-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 DLM_3981 15add4773da1b04365c0a0523bf848a6 323 SUPERFAMILY SSF53756 5 317 6.28E-70 T 23-10-2018 DLM_3981 15add4773da1b04365c0a0523bf848a6 323 Gene3D G3DSA:3.40.50.2000 5 164 1.0E-51 T 23-10-2018 DLM_3981 15add4773da1b04365c0a0523bf848a6 323 Gene3D G3DSA:3.40.50.2000 173 317 2.7E-41 T 23-10-2018 DLM_3981 15add4773da1b04365c0a0523bf848a6 323 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 81 304 1.1E-50 T 23-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 521 804 1.3E-108 T 23-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Pfam PF05524 PEP-utilising enzyme, N-terminal 277 395 5.4E-19 T 23-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 712 730 - T 23-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 276 829 3.3E-150 T 23-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 765 777 2.4E-21 T 23-10-2018 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 729 744 2.4E-21 T 23-10-2018 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 563 582 2.4E-21 T 23-10-2018 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 712 727 2.4E-21 T 23-10-2018 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Gene3D G3DSA:3.40.930.10 3 144 1.9E-34 T 23-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Gene3D G3DSA:3.30.1340.10 160 243 1.9E-20 T 23-10-2018 IPR035895 HPr-like superfamily DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Gene3D G3DSA:1.10.274.10 294 416 2.8E-61 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 PRINTS PR00107 Phosphocarrier protein signature 211 228 6.6E-11 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 PRINTS PR00107 Phosphocarrier protein signature 196 211 6.6E-11 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 PRINTS PR00107 Phosphocarrier protein signature 171 187 6.6E-11 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 SUPERFAMILY SSF55594 161 239 5.36E-20 T 23-10-2018 IPR035895 HPr-like superfamily DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 SUPERFAMILY SSF55804 4 142 3.92E-37 T 23-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 161 239 4.1E-15 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 SUPERFAMILY SSF47831 311 408 7.85E-21 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 SUPERFAMILY SSF52009 395 515 1.7E-28 T 23-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Pfam PF00381 PTS HPr component phosphorylation site 162 239 1.6E-19 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 171 178 - T 23-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Gene3D G3DSA:3.20.20.60 504 833 1.1E-116 T 23-10-2018 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 SUPERFAMILY SSF51621 520 814 9.42E-101 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 454 465 - T 23-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Pfam PF00391 PEP-utilising enzyme, mobile domain 422 495 1.9E-18 T 23-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 143 4.4E-30 T 23-10-2018 IPR002178 PTS EIIA type-2 domain DLM_2818 39b6410f871425e1573e6b74f40b7ad4 834 Gene3D G3DSA:3.50.30.10 277 503 2.8E-61 T 23-10-2018 DLM_2202 9da3b1d5f802f4720f6b39c9986b7f0b 122 Pfam PF12840 Helix-turn-helix domain 7 69 2.2E-15 T 23-10-2018 DLM_2202 9da3b1d5f802f4720f6b39c9986b7f0b 122 Gene3D G3DSA:1.10.10.10 2 95 1.3E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2202 9da3b1d5f802f4720f6b39c9986b7f0b 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 2.0E-5 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_2202 9da3b1d5f802f4720f6b39c9986b7f0b 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 2.0E-5 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_2202 9da3b1d5f802f4720f6b39c9986b7f0b 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.0E-5 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_2202 9da3b1d5f802f4720f6b39c9986b7f0b 122 SMART SM00418 8 88 2.6E-9 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_2202 9da3b1d5f802f4720f6b39c9986b7f0b 122 SUPERFAMILY SSF46785 2 93 7.49E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0975 e3bd4e05184182f91ac65f9614b826f3 523 SUPERFAMILY SSF161098 274 516 2.75E-39 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0975 e3bd4e05184182f91ac65f9614b826f3 523 Gene3D G3DSA:1.10.3720.10 276 521 1.2E-33 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0975 e3bd4e05184182f91ac65f9614b826f3 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 249 3.3E-11 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0975 e3bd4e05184182f91ac65f9614b826f3 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 519 2.6E-21 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0975 e3bd4e05184182f91ac65f9614b826f3 523 Gene3D G3DSA:1.10.3720.10 23 256 7.2E-45 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0975 e3bd4e05184182f91ac65f9614b826f3 523 SUPERFAMILY SSF161098 18 249 6.11E-40 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 SMART SM00304 208 261 3.6E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 Gene3D G3DSA:1.10.287.950 208 538 4.3E-65 T 23-10-2018 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 SUPERFAMILY SSF58104 229 537 5.23E-64 T 23-10-2018 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 SMART SM00283 276 537 1.0E-56 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 503 1.5E-36 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 Pfam PF00672 HAMP domain 208 258 2.6E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 297 326 5.2E-25 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 374 401 5.2E-25 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 23 5.2E-25 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 5.2E-25 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4081 044f0456a88997b1aa2a240e48fd0079 538 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 181 9.4E-21 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_4370 51054247a516ba75f68c13a10e6547db 186 SUPERFAMILY SSF53335 8 167 1.67E-44 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4370 51054247a516ba75f68c13a10e6547db 186 Pfam PF03602 Conserved hypothetical protein 95 8 178 8.8E-53 T 23-10-2018 DLM_4370 51054247a516ba75f68c13a10e6547db 186 PIRSF PIRSF004553 7 181 5.5E-46 T 23-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DLM_4370 51054247a516ba75f68c13a10e6547db 186 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DLM_4370 51054247a516ba75f68c13a10e6547db 186 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 178 2.3E-47 T 23-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DLM_4370 51054247a516ba75f68c13a10e6547db 186 Gene3D G3DSA:3.40.50.150 1 185 3.6E-56 T 23-10-2018 DLM_2706 25462f4bdda387e49517fac003e19c64 623 Pfam PF09299 Mu transposase, C-terminal 412 470 1.8E-11 T 23-10-2018 IPR015378 Transposase-like, Mu, C-terminal DLM_2706 25462f4bdda387e49517fac003e19c64 623 Pfam PF00665 Integrase core domain 186 306 2.3E-11 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_2706 25462f4bdda387e49517fac003e19c64 623 SUPERFAMILY SSF53098 184 396 3.41E-43 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_2706 25462f4bdda387e49517fac003e19c64 623 SUPERFAMILY SSF50610 403 472 1.83E-17 T 23-10-2018 IPR009004 Transposase, Mu, C-terminal DLM_2706 25462f4bdda387e49517fac003e19c64 623 Gene3D G3DSA:3.30.420.10 175 410 1.3E-43 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 139 1.2E-22 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 SUPERFAMILY SSF52540 3 206 2.81E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1761 0cdd27acac91511c1477333be98f20e9 604 Pfam PF03144 Elongation factor Tu domain 2 219 289 1.4E-11 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 Gene3D G3DSA:2.40.50.250 482 598 2.5E-132 T 23-10-2018 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 Gene3D G3DSA:3.40.50.300 2 198 1.1E-67 T 23-10-2018 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 SUPERFAMILY SSF50447 151 299 1.52E-32 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_1761 0cdd27acac91511c1477333be98f20e9 604 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 7.5E-56 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 Gene3D G3DSA:3.30.70.870 306 589 2.5E-132 T 23-10-2018 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 Gene3D G3DSA:3.30.70.240 389 481 2.5E-132 T 23-10-2018 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 Pfam PF00679 Elongation factor G C-terminus 396 479 6.1E-25 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like DLM_1761 0cdd27acac91511c1477333be98f20e9 604 SUPERFAMILY SSF54980 398 512 6.23E-32 T 23-10-2018 IPR035647 EF-G domain III/V-like DLM_1761 0cdd27acac91511c1477333be98f20e9 604 SUPERFAMILY SSF54980 302 387 6.12E-14 T 23-10-2018 IPR035647 EF-G domain III/V-like DLM_1761 0cdd27acac91511c1477333be98f20e9 604 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 SMART SM00838 398 483 0.0015 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like DLM_1761 0cdd27acac91511c1477333be98f20e9 604 Gene3D G3DSA:2.40.30.10 200 299 1.5E-32 T 23-10-2018 DLM_1761 0cdd27acac91511c1477333be98f20e9 604 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site DLM_1761 0cdd27acac91511c1477333be98f20e9 604 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 598 4.2E-300 T 23-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 DLM_3723 c979905d4dbfe1511ac72aa9c62caf40 175 PIRSF PIRSF005413 1 174 2.9E-48 T 23-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3723 c979905d4dbfe1511ac72aa9c62caf40 175 SUPERFAMILY SSF110111 57 170 4.05E-34 T 23-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3723 c979905d4dbfe1511ac72aa9c62caf40 175 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 24 167 4.9E-37 T 23-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3723 c979905d4dbfe1511ac72aa9c62caf40 175 Gene3D G3DSA:2.60.370.10 48 174 5.7E-34 T 23-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_1428 61ebd2c1c8298355b3208efb89ab3c7b 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 257 1.1E-59 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1428 61ebd2c1c8298355b3208efb89ab3c7b 261 SMART SM00062 25 259 1.7E-68 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1428 61ebd2c1c8298355b3208efb89ab3c7b 261 Gene3D G3DSA:3.40.190.10 111 216 3.6E-76 T 23-10-2018 DLM_1428 61ebd2c1c8298355b3208efb89ab3c7b 261 Gene3D G3DSA:3.40.190.10 27 255 3.6E-76 T 23-10-2018 DLM_1428 61ebd2c1c8298355b3208efb89ab3c7b 261 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 256 2.3E-77 T 23-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 DLM_1428 61ebd2c1c8298355b3208efb89ab3c7b 261 SUPERFAMILY SSF53850 2 260 3.9E-64 T 23-10-2018 DLM_2763 2a28a0102f5d628f93d06a4d7f4d27d0 197 Pfam PF00510 Cytochrome c oxidase subunit III 55 195 4.2E-15 T 23-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2763 2a28a0102f5d628f93d06a4d7f4d27d0 197 Gene3D G3DSA:1.20.120.80 14 197 3.9E-47 T 23-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2763 2a28a0102f5d628f93d06a4d7f4d27d0 197 SUPERFAMILY SSF81452 12 195 6.41E-45 T 23-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2371 dc26aedef464245335420bd342d681d8 153 Gene3D G3DSA:1.10.1200.120 3 137 4.2E-36 T 23-10-2018 IPR036019 Gated mechanosensitive channel DLM_2371 dc26aedef464245335420bd342d681d8 153 SUPERFAMILY SSF81330 13 137 4.71E-35 T 23-10-2018 IPR036019 Gated mechanosensitive channel DLM_2371 dc26aedef464245335420bd342d681d8 153 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 129 8.0E-37 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DLM_2371 dc26aedef464245335420bd342d681d8 153 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 6.8E-13 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DLM_2371 dc26aedef464245335420bd342d681d8 153 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 105 114 6.8E-13 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DLM_2371 dc26aedef464245335420bd342d681d8 153 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 96 104 6.8E-13 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DLM_2371 dc26aedef464245335420bd342d681d8 153 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 147 22.712 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DLM_2371 dc26aedef464245335420bd342d681d8 153 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 23-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site DLM_2371 dc26aedef464245335420bd342d681d8 153 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 1.5E-40 T 23-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 Gene3D G3DSA:1.10.540.10 42 157 8.9E-101 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 SUPERFAMILY SSF47203 280 452 8.05E-44 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 Gene3D G3DSA:2.40.110.10 158 281 8.9E-101 T 23-10-2018 DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 Gene3D G3DSA:1.20.140.10 282 448 8.9E-101 T 23-10-2018 DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 465 589 3.1E-32 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 448 4.4E-28 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 SUPERFAMILY SSF56645 38 280 2.49E-60 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 31 6.8E-9 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 269 5.8E-16 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_0094 6dbd05a68021a389374269ced0ba34b3 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 155 4.4E-14 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 8.5E-18 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 SUPERFAMILY SSF46785 11 79 3.61E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 SUPERFAMILY SSF48008 82 216 1.99E-23 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.7E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.7E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 SMART SM00895 85 209 2.0E-14 T 23-10-2018 IPR011711 GntR, C-terminal DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 SMART SM00345 17 75 5.3E-20 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 Pfam PF07729 FCD domain 89 208 1.8E-20 T 23-10-2018 IPR011711 GntR, C-terminal DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 Gene3D G3DSA:1.10.10.10 11 76 9.6E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0677 cee76e0e3a3cffa48acff2a9c2687272 227 Gene3D G3DSA:1.20.120.530 81 214 2.8E-22 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_2146 276c11ed69a1c1ce7ebe9e89a74868db 641 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 297 430 2.3E-36 T 23-10-2018 DLM_2146 276c11ed69a1c1ce7ebe9e89a74868db 641 Gene3D G3DSA:3.20.20.150 1 265 2.0E-70 T 23-10-2018 DLM_2146 276c11ed69a1c1ce7ebe9e89a74868db 641 Pfam PF01261 Xylose isomerase-like TIM barrel 18 217 2.3E-37 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DLM_2146 276c11ed69a1c1ce7ebe9e89a74868db 641 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 444 579 3.6E-10 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_2146 276c11ed69a1c1ce7ebe9e89a74868db 641 SUPERFAMILY SSF51658 1 266 1.12E-73 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_2146 276c11ed69a1c1ce7ebe9e89a74868db 641 SUPERFAMILY SSF54593 290 626 2.14E-62 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2146 276c11ed69a1c1ce7ebe9e89a74868db 641 Gene3D G3DSA:3.10.180.10 292 439 2.6E-41 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2146 276c11ed69a1c1ce7ebe9e89a74868db 641 Gene3D G3DSA:3.10.180.10 441 639 3.4E-48 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_0378 18c5ef2eb4cef266c1a9037f41241aff 481 Pfam PF12801 4Fe-4S binding domain 98 136 4.1E-10 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_0378 18c5ef2eb4cef266c1a9037f41241aff 481 Pfam PF13746 4Fe-4S dicluster domain 222 327 1.4E-43 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_0378 18c5ef2eb4cef266c1a9037f41241aff 481 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 479 1.1E-155 T 23-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 DLM_0378 18c5ef2eb4cef266c1a9037f41241aff 481 SUPERFAMILY SSF54862 108 370 4.69E-33 T 23-10-2018 DLM_0378 18c5ef2eb4cef266c1a9037f41241aff 481 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 365 480 2.7E-29 T 23-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain DLM_0378 18c5ef2eb4cef266c1a9037f41241aff 481 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0378 18c5ef2eb4cef266c1a9037f41241aff 481 Gene3D G3DSA:2.60.40.10 364 481 1.7E-30 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 Pfam PF00005 ABC transporter 19 178 1.3E-20 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 SUPERFAMILY SSF52540 296 518 1.2E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 Pfam PF00005 ABC transporter 328 459 3.8E-24 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 SUPERFAMILY SSF52540 2 256 1.07E-42 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 Gene3D G3DSA:3.40.50.300 3 273 5.2E-55 T 23-10-2018 DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 SMART SM00382 337 504 7.0E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 SMART SM00382 26 223 4.0E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 Pfam PF12848 ABC transporter 218 292 2.1E-28 T 23-10-2018 IPR032781 ABC-transporter extension domain DLM_2451 6e68edaaefa3f8a887f9aaaa9fc283a3 637 Gene3D G3DSA:3.40.50.300 276 536 1.1E-54 T 23-10-2018 DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 SMART SM00052 409 638 7.3E-6 T 23-10-2018 IPR001633 EAL domain DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 SUPERFAMILY SSF141868 417 636 3.79E-26 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 Gene3D G3DSA:3.30.1040.50 105 155 5.0E-18 T 23-10-2018 DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 SUPERFAMILY SSF55073 245 397 1.18E-15 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 Gene3D G3DSA:3.30.70.270 227 398 9.3E-24 T 23-10-2018 DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 Pfam PF16448 LapD/MoxY periplasmic domain 29 149 9.3E-35 T 23-10-2018 IPR032244 LapD/MoxY, periplasmic domain DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 SMART SM00267 228 399 3.3E-8 T 23-10-2018 IPR000160 GGDEF domain DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 Gene3D G3DSA:3.20.20.450 411 638 9.9E-28 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 Pfam PF00563 EAL domain 417 638 9.1E-25 T 23-10-2018 IPR001633 EAL domain DLM_3694 f44a374e30f92e76f6ad636f0cf2d70d 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 241 391 2.7E-15 T 23-10-2018 IPR000160 GGDEF domain DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 196 7.8E-21 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 Gene3D G3DSA:1.10.10.10 135 201 1.1E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 SMART SM00448 6 117 9.4E-31 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 SUPERFAMILY SSF52172 6 151 4.13E-34 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 SUPERFAMILY SSF46894 131 199 1.05E-17 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.5E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.5E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.5E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 Gene3D G3DSA:3.40.50.2300 2 133 5.9E-48 T 23-10-2018 DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 SMART SM00421 141 198 4.7E-20 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2624 518224bb7d6bd2e172745c9a6ef4d8cb 202 Pfam PF00072 Response regulator receiver domain 8 117 4.6E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4399 3e64d984fd719c79a0c7c7ec0251dfd7 62 Gene3D G3DSA:1.10.287.310 1 62 5.9E-26 T 23-10-2018 DLM_4399 3e64d984fd719c79a0c7c7ec0251dfd7 62 SUPERFAMILY SSF46561 1 61 1.15E-19 T 23-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4399 3e64d984fd719c79a0c7c7ec0251dfd7 62 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.796 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4399 3e64d984fd719c79a0c7c7ec0251dfd7 62 Pfam PF00831 Ribosomal L29 protein 4 60 3.1E-21 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4399 3e64d984fd719c79a0c7c7ec0251dfd7 62 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4399 3e64d984fd719c79a0c7c7ec0251dfd7 62 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.2E-19 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_1593 2b7254404a815cfb96b0404ac7c03b75 168 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 13 133 6.1E-27 T 23-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN DLM_1593 2b7254404a815cfb96b0404ac7c03b75 168 Gene3D G3DSA:2.60.40.4150 20 148 3.1E-30 T 23-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily DLM_1593 2b7254404a815cfb96b0404ac7c03b75 168 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 136 3.5E-24 T 23-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 255 42.483 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 254 3.2E-98 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 Gene3D G3DSA:3.90.230.10 1 261 3.1E-116 T 23-10-2018 DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 SUPERFAMILY SSF55920 5 254 2.09E-94 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 1.7E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 1.7E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 1.7E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 1.7E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DLM_1105 fbcec6f0f7b19d7a3a69a04f0f32e109 264 Pfam PF00557 Metallopeptidase family M24 12 246 4.0E-59 T 23-10-2018 IPR000994 Peptidase M24 DLM_0638 5458e496f2c214142b247d78517d84cd 404 SMART SM00382 156 336 4.2E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0638 5458e496f2c214142b247d78517d84cd 404 SMART SM00959 1 33 1.3E-6 T 23-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DLM_0638 5458e496f2c214142b247d78517d84cd 404 SUPERFAMILY SSF50249 35 111 3.9E-29 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0638 5458e496f2c214142b247d78517d84cd 404 Pfam PF07497 Rho termination factor, RNA-binding domain 38 111 9.6E-32 T 23-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 DLM_0638 5458e496f2c214142b247d78517d84cd 404 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 404 242.117 T 23-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DLM_0638 5458e496f2c214142b247d78517d84cd 404 SUPERFAMILY SSF52540 76 357 1.5E-68 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0638 5458e496f2c214142b247d78517d84cd 404 Gene3D G3DSA:2.40.50.140 33 109 3.8E-34 T 23-10-2018 DLM_0638 5458e496f2c214142b247d78517d84cd 404 Gene3D G3DSA:1.10.720.10 1 32 8.3E-12 T 23-10-2018 DLM_0638 5458e496f2c214142b247d78517d84cd 404 TIGRFAM TIGR00767 rho: transcription termination factor Rho 3 403 9.6E-208 T 23-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DLM_0638 5458e496f2c214142b247d78517d84cd 404 SMART SM00357 38 104 2.6E-19 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 DLM_0638 5458e496f2c214142b247d78517d84cd 404 Gene3D G3DSA:3.40.50.300 116 403 9.2E-129 T 23-10-2018 DLM_0638 5458e496f2c214142b247d78517d84cd 404 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 349 3.6E-23 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_0638 5458e496f2c214142b247d78517d84cd 404 Pfam PF07498 Rho termination factor, N-terminal domain 1 33 2.4E-11 T 23-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DLM_0638 5458e496f2c214142b247d78517d84cd 404 SUPERFAMILY SSF68912 2 32 1.02E-5 T 23-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 SUPERFAMILY SSF47384 660 740 3.14E-19 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 SMART SM00448 917 1032 3.3E-17 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 787 891 4.5E-28 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 SUPERFAMILY SSF55874 731 890 1.83E-42 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 SUPERFAMILY SSF52172 915 1048 7.4E-27 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 673 739 3.7E-14 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 SMART SM00387 786 896 5.8E-35 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 Gene3D G3DSA:3.30.565.10 741 894 1.1E-47 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 Gene3D G3DSA:1.10.287.130 659 740 1.2E-22 T 23-10-2018 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 SMART SM00388 673 739 7.6E-18 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 Pfam PF00072 Response regulator receiver domain 920 1030 2.9E-15 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 822 836 3.1E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 878 891 3.1E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 850 3.1E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 872 3.1E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1381 f9ae0cc0a5db9d1e8513e6b95eba1698 1129 Gene3D G3DSA:3.40.50.12740 916 1128 5.4E-25 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 Gene3D G3DSA:3.55.50.10 112 213 5.1E-80 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 SUPERFAMILY SSF69279 23 209 4.99E-44 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 SUPERFAMILY SSF69255 415 510 2.43E-31 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 SUPERFAMILY SSF69349 500 558 7.06E-7 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 538 645 1.7E-37 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 557 3.0E-121 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 SUPERFAMILY SSF69279 223 401 2.21E-14 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 Gene3D G3DSA:2.40.50.230 408 515 2.7E-43 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 2.1E-79 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 SUPERFAMILY SSF69349 717 852 7.85E-6 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 Gene3D G3DSA:2.30.110.50 33 363 5.1E-80 T 23-10-2018 DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 565 2.6E-96 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 701 853 1.0E-55 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_1589 88e112eb9ef519e28bc78e403d07682e 885 Gene3D G3DSA:3.30.1920.30 246 315 5.1E-80 T 23-10-2018 DLM_2117 87eb6491549f4bd2a39a14f7ae28d0bf 222 SUPERFAMILY SSF51306 87 220 3.14E-26 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DLM_2117 87eb6491549f4bd2a39a14f7ae28d0bf 222 Pfam PF00717 Peptidase S24-like 136 201 3.6E-12 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DLM_2117 87eb6491549f4bd2a39a14f7ae28d0bf 222 SUPERFAMILY SSF47413 5 55 6.19E-7 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_2117 87eb6491549f4bd2a39a14f7ae28d0bf 222 Gene3D G3DSA:2.10.109.10 101 222 1.3E-12 T 23-10-2018 DLM_2117 87eb6491549f4bd2a39a14f7ae28d0bf 222 Pfam PF01381 Helix-turn-helix 4 48 1.6E-5 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2117 87eb6491549f4bd2a39a14f7ae28d0bf 222 Gene3D G3DSA:1.10.260.40 2 57 1.8E-7 T 23-10-2018 DLM_1714 a2adcbfc447b7a66f86eb23b575b5e88 443 Gene3D G3DSA:3.40.640.10 79 338 5.6E-132 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1714 a2adcbfc447b7a66f86eb23b575b5e88 443 Pfam PF00202 Aminotransferase class-III 46 439 3.6E-72 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1714 a2adcbfc447b7a66f86eb23b575b5e88 443 SUPERFAMILY SSF53383 37 440 4.32E-101 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_1714 a2adcbfc447b7a66f86eb23b575b5e88 443 Gene3D G3DSA:3.90.1150.10 46 436 5.6E-132 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1714 a2adcbfc447b7a66f86eb23b575b5e88 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 291 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1714 a2adcbfc447b7a66f86eb23b575b5e88 443 PIRSF PIRSF000521 166 443 4.6E-27 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1714 a2adcbfc447b7a66f86eb23b575b5e88 443 PIRSF PIRSF000521 26 146 1.2E-7 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_0722 da2048dd656556c1c3233ef72d77198e 233 Gene3D G3DSA:2.30.210.20 3 59 4.6E-25 T 23-10-2018 DLM_0722 da2048dd656556c1c3233ef72d77198e 233 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 33 203 2.1E-74 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DLM_0722 da2048dd656556c1c3233ef72d77198e 233 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 233 99.242 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DLM_0722 da2048dd656556c1c3233ef72d77198e 233 Gene3D G3DSA:3.40.630.70 60 232 2.2E-68 T 23-10-2018 DLM_0722 da2048dd656556c1c3233ef72d77198e 233 SUPERFAMILY SSF55729 2 226 3.13E-92 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_0722 da2048dd656556c1c3233ef72d77198e 233 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 30 214 1.9E-64 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 Pfam PF00009 Elongation factor Tu GTP binding domain 23 223 3.1E-43 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 PRINTS PR00315 GTP-binding elongation factor signature 123 134 5.8E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 PRINTS PR00315 GTP-binding elongation factor signature 26 39 5.8E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 PRINTS PR00315 GTP-binding elongation factor signature 107 117 5.8E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 PRINTS PR00315 GTP-binding elongation factor signature 160 169 5.8E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 PRINTS PR00315 GTP-binding elongation factor signature 87 95 5.8E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 Gene3D G3DSA:2.40.30.10 238 324 4.0E-26 T 23-10-2018 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 431 1.3E-196 T 23-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 476 53.38 T 23-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 SUPERFAMILY SSF50447 241 324 3.09E-22 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 SUPERFAMILY SSF52540 16 232 1.21E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 Gene3D G3DSA:3.40.50.300 1 236 2.3E-76 T 23-10-2018 DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 SUPERFAMILY SSF50465 330 432 7.67E-31 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DLM_1475 21a523fea2b2558a48ed7d50871e54b8 476 Gene3D G3DSA:2.40.30.10 328 432 6.6E-33 T 23-10-2018 DLM_4075 37441513b0f2c69dc767b76169e351b9 401 Gene3D G3DSA:3.30.70.270 212 391 3.7E-50 T 23-10-2018 DLM_4075 37441513b0f2c69dc767b76169e351b9 401 SUPERFAMILY SSF55073 232 394 7.85E-41 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4075 37441513b0f2c69dc767b76169e351b9 401 SMART SM00267 216 393 6.5E-55 T 23-10-2018 IPR000160 GGDEF domain DLM_4075 37441513b0f2c69dc767b76169e351b9 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 389 2.5E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_4075 37441513b0f2c69dc767b76169e351b9 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 223 392 1.9E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 SMART SM00994 10 49 1.2E-22 T 23-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 320 398 4.9E-17 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 418 53.651 T 23-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 Pfam PF06689 ClpX C4-type zinc finger 11 48 1.1E-19 T 23-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 SUPERFAMILY SSF57716 11 46 1.43E-11 T 23-10-2018 DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 SMART SM00382 115 267 2.0E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 116 313 1.1E-50 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 SMART SM01086 320 414 1.5E-33 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 Gene3D G3DSA:1.10.8.60 319 426 5.0E-40 T 23-10-2018 DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 Gene3D G3DSA:3.40.50.300 59 318 6.7E-110 T 23-10-2018 DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 6 414 9.2E-206 T 23-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 Gene3D G3DSA:3.30.50.30 2 50 1.2E-24 T 23-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily DLM_1092 d6f0bd585f3cfc9b280f9276f5687728 426 SUPERFAMILY SSF52540 66 406 4.85E-76 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3269 01f96e5393bdb3351e6d916169f0f1df 169 SUPERFAMILY SSF51316 19 116 1.36E-13 T 23-10-2018 IPR011057 Mss4-like superfamily DLM_3269 01f96e5393bdb3351e6d916169f0f1df 169 Gene3D G3DSA:2.170.150.70 30 140 1.7E-19 T 23-10-2018 DLM_0610 8dc9e9bf7561af61d014162ab6d60682 266 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 254 1.5E-127 T 23-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 DLM_0610 8dc9e9bf7561af61d014162ab6d60682 266 SUPERFAMILY SSF51621 2 254 1.76E-88 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_0610 8dc9e9bf7561af61d014162ab6d60682 266 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 4.3E-65 T 23-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DLM_0610 8dc9e9bf7561af61d014162ab6d60682 266 Gene3D G3DSA:3.20.20.60 1 264 6.1E-98 T 23-10-2018 DLM_2296 2719a4f724ddb88b2facbb8dda3f3e5b 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 3 345 1.8E-106 T 23-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 DLM_2296 2719a4f724ddb88b2facbb8dda3f3e5b 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 345 1.8E-54 T 23-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DLM_3915 b0869b9fd5ec9ce587fca4a6b15bfd92 224 Pfam PF03783 Curli production assembly/transport component CsgG 44 220 2.5E-32 T 23-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 DLM_3915 b0869b9fd5ec9ce587fca4a6b15bfd92 224 Gene3D G3DSA:3.40.50.10070 36 167 7.1E-7 T 23-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 DLM_3915 b0869b9fd5ec9ce587fca4a6b15bfd92 224 SUPERFAMILY SSF52964 46 144 7.59E-10 T 23-10-2018 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 SUPERFAMILY SSF56655 10 260 1.7E-66 T 23-10-2018 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 Gene3D G3DSA:3.40.190.80 145 263 1.1E-22 T 23-10-2018 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 23-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 Gene3D G3DSA:3.30.540.10 1 141 1.0E-38 T 23-10-2018 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 209 223 - T 23-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 2.0E-28 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 2.0E-28 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 2.0E-28 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 2.0E-28 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 2.0E-28 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3935 47ea24ab7131939e5a9b088f1ba1a1c4 263 Pfam PF00459 Inositol monophosphatase family 4 252 1.5E-51 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_0710 0a4626ab4c3c59c8b554df49cc9f0db0 269 Gene3D G3DSA:3.20.20.60 2 264 3.6E-88 T 23-10-2018 DLM_0710 0a4626ab4c3c59c8b554df49cc9f0db0 269 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 22 246 2.0E-59 T 23-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DLM_0710 0a4626ab4c3c59c8b554df49cc9f0db0 269 SUPERFAMILY SSF51621 3 257 1.54E-77 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_0289 4f075bc66ff390e2dbc6f01c4b99f09e 185 SUPERFAMILY SSF52540 6 175 8.02E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0289 4f075bc66ff390e2dbc6f01c4b99f09e 185 Pfam PF13521 AAA domain 6 163 6.0E-24 T 23-10-2018 IPR038727 NadR/Ttd14, AAA domain DLM_0289 4f075bc66ff390e2dbc6f01c4b99f09e 185 Gene3D G3DSA:3.40.50.300 5 169 2.7E-35 T 23-10-2018 DLM_4533 3891906e85a43e0aaba1471237780a89 451 Gene3D G3DSA:1.20.1250.20 22 440 6.8E-65 T 23-10-2018 DLM_4533 3891906e85a43e0aaba1471237780a89 451 Pfam PF00083 Sugar (and other) transporter 26 228 8.3E-21 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DLM_4533 3891906e85a43e0aaba1471237780a89 451 Pfam PF00083 Sugar (and other) transporter 246 430 3.4E-12 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DLM_4533 3891906e85a43e0aaba1471237780a89 451 PRINTS PR00171 Sugar transporter signature 367 379 2.6E-5 T 23-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DLM_4533 3891906e85a43e0aaba1471237780a89 451 PRINTS PR00171 Sugar transporter signature 39 49 2.6E-5 T 23-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DLM_4533 3891906e85a43e0aaba1471237780a89 451 PRINTS PR00171 Sugar transporter signature 345 366 2.6E-5 T 23-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DLM_4533 3891906e85a43e0aaba1471237780a89 451 PRINTS PR00171 Sugar transporter signature 130 149 2.6E-5 T 23-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DLM_4533 3891906e85a43e0aaba1471237780a89 451 SUPERFAMILY SSF103473 21 432 6.67E-64 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_4533 3891906e85a43e0aaba1471237780a89 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_3300 7a1246d0fcb44496050f8d06ce414a33 414 SUPERFAMILY SSF53659 20 414 3.65E-141 T 23-10-2018 DLM_3300 7a1246d0fcb44496050f8d06ce414a33 414 SMART SM01329 26 410 4.5E-177 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_3300 7a1246d0fcb44496050f8d06ce414a33 414 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 5 414 6.6E-213 T 23-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DLM_3300 7a1246d0fcb44496050f8d06ce414a33 414 Gene3D G3DSA:3.40.718.10 1 414 5.4E-179 T 23-10-2018 DLM_3300 7a1246d0fcb44496050f8d06ce414a33 414 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 27 409 5.7E-115 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_3300 7a1246d0fcb44496050f8d06ce414a33 414 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 301 320 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DLM_0911 45a29a232269a8a37cd5b2671c013f3d 310 SUPERFAMILY SSF52467 187 306 8.83E-46 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DLM_0911 45a29a232269a8a37cd5b2671c013f3d 310 Pfam PF01012 Electron transfer flavoprotein domain 4 169 4.2E-39 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_0911 45a29a232269a8a37cd5b2671c013f3d 310 SUPERFAMILY SSF52402 3 182 6.56E-55 T 23-10-2018 DLM_0911 45a29a232269a8a37cd5b2671c013f3d 310 PIRSF PIRSF000089 1 310 2.4E-107 T 23-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DLM_0911 45a29a232269a8a37cd5b2671c013f3d 310 SMART SM00893 3 180 1.2E-56 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_0911 45a29a232269a8a37cd5b2671c013f3d 310 Gene3D G3DSA:3.40.50.620 2 181 3.6E-58 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0911 45a29a232269a8a37cd5b2671c013f3d 310 Gene3D G3DSA:3.40.50.1220 182 310 8.1E-57 T 23-10-2018 DLM_0911 45a29a232269a8a37cd5b2671c013f3d 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 188 271 2.1E-34 T 23-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Gene3D G3DSA:3.90.740.10 227 424 0.0 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Pfam PF08264 Anticodon-binding domain of tRNA 712 837 3.0E-18 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 SUPERFAMILY SSF52374 5 680 1.04E-146 T 23-10-2018 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Gene3D G3DSA:1.10.730.10 8 804 0.0 T 23-10-2018 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 872 0.0 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 413 2.1E-65 T 23-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Gene3D G3DSA:3.40.50.620 33 578 0.0 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 497 515 8.3E-50 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 536 558 8.3E-50 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 8.3E-50 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 8.3E-50 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 8.3E-50 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 8.3E-50 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 569 579 8.3E-50 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 SUPERFAMILY SSF50677 227 425 1.99E-49 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Gene3D G3DSA:3.10.330.110 579 641 0.0 T 23-10-2018 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 872 23.29 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 631 671 9.1E-7 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 428 604 5.4E-8 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Pfam PF09334 tRNA synthetases class I (M) 39 171 1.1E-16 T 23-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 Gene3D G3DSA:3.10.20.590 811 872 2.3E-22 T 23-10-2018 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 SUPERFAMILY SSF47323 675 872 1.87E-37 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3796 4fcf7cd37edf84613467c79775c5b7bc 872 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 Pfam PF02803 Thiolase, C-terminal domain 278 398 4.4E-41 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 PIRSF PIRSF000429 2 400 1.1E-125 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 398 9.5E-134 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 Gene3D G3DSA:3.40.47.10 146 394 3.2E-138 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 SUPERFAMILY SSF53901 278 399 1.55E-38 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 Pfam PF00108 Thiolase, N-terminal domain 9 268 4.0E-70 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 SUPERFAMILY SSF53901 5 273 1.5E-72 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1064 89c47cd06d3a4d1c899f666b149cfc4c 400 Gene3D G3DSA:3.40.47.10 9 286 3.2E-138 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 SUPERFAMILY SSF54534 83 157 3.27E-23 T 23-10-2018 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.759 T 23-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 3.5E-27 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 2.1E-57 T 23-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 Gene3D G3DSA:3.10.50.30 76 158 7.3E-28 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 PIRSF PIRSF006092 1 158 5.9E-50 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 SUPERFAMILY SSF46557 3 77 1.57E-27 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 Gene3D G3DSA:1.10.287.180 1 75 1.2E-31 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DLM_0098 9a33c74378b9b3c782f8e9f98e5fee9b 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.2E-31 T 23-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DLM_4527 153bf959d9f963ac2e4223d17fd7c606 396 Gene3D G3DSA:3.40.50.10540 5 390 1.6E-147 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily DLM_4527 153bf959d9f963ac2e4223d17fd7c606 396 Gene3D G3DSA:3.30.1540.10 233 324 1.6E-147 T 23-10-2018 DLM_4527 153bf959d9f963ac2e4223d17fd7c606 396 SUPERFAMILY SSF89796 3 396 4.58E-155 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily DLM_4527 153bf959d9f963ac2e4223d17fd7c606 396 Pfam PF02515 CoA-transferase family III 5 373 4.2E-140 T 23-10-2018 IPR003673 CoA-transferase family III GO:0003824 DLM_4521 0d6b07ebf0916da81f73794e90d12eab 359 Gene3D G3DSA:1.10.287.470 91 163 1.8E-72 T 23-10-2018 DLM_4521 0d6b07ebf0916da81f73794e90d12eab 359 Gene3D G3DSA:2.40.420.20 41 352 1.8E-72 T 23-10-2018 DLM_4521 0d6b07ebf0916da81f73794e90d12eab 359 SUPERFAMILY SSF111369 47 275 3.92E-24 T 23-10-2018 DLM_4521 0d6b07ebf0916da81f73794e90d12eab 359 Gene3D G3DSA:2.40.30.170 43 277 1.8E-72 T 23-10-2018 DLM_4521 0d6b07ebf0916da81f73794e90d12eab 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 260 3.1E-17 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_4521 0d6b07ebf0916da81f73794e90d12eab 359 Gene3D G3DSA:2.40.50.100 57 203 1.8E-72 T 23-10-2018 DLM_4521 0d6b07ebf0916da81f73794e90d12eab 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 353 1.4E-73 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_3360 6076c7e686fb90446f274131f70c3f21 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 8 276 1.9E-104 T 23-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 DLM_3360 6076c7e686fb90446f274131f70c3f21 278 Gene3D G3DSA:3.20.20.220 1 278 1.3E-99 T 23-10-2018 DLM_3360 6076c7e686fb90446f274131f70c3f21 278 Pfam PF02219 Methylenetetrahydrofolate reductase 2 277 1.1E-88 T 23-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DLM_3360 6076c7e686fb90446f274131f70c3f21 278 SUPERFAMILY SSF51730 2 277 2.75E-97 T 23-10-2018 IPR029041 FAD-linked oxidoreductase-like DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 125 2.6E-8 T 23-10-2018 IPR000014 PAS domain DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 379 6.7E-23 T 23-10-2018 IPR000014 PAS domain DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 255 8.2E-11 T 23-10-2018 IPR000014 PAS domain DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Gene3D G3DSA:3.30.450.20 259 377 1.5E-25 T 23-10-2018 DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Gene3D G3DSA:3.30.450.20 138 258 2.9E-26 T 23-10-2018 DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SMART SM00091 131 197 9.2E-6 T 23-10-2018 IPR000014 PAS domain DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SMART SM00091 3 68 3.9 T 23-10-2018 IPR000014 PAS domain DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SMART SM00091 260 326 2.3E-11 T 23-10-2018 IPR000014 PAS domain DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SUPERFAMILY SSF55785 2 117 2.79E-14 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 589 2.0E-6 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Gene3D G3DSA:3.30.565.10 453 590 5.3E-20 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SMART SM00387 493 591 8.0E-5 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Gene3D G3DSA:3.30.450.20 1 131 4.8E-24 T 23-10-2018 DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SUPERFAMILY SSF55874 463 588 6.81E-13 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Pfam PF00989 PAS fold 262 363 4.8E-12 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Pfam PF07568 Histidine kinase 396 467 2.3E-24 T 23-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SUPERFAMILY SSF55785 245 374 1.54E-22 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Pfam PF08448 PAS fold 143 250 1.6E-12 T 23-10-2018 IPR013656 PAS fold-4 DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 Pfam PF08448 PAS fold 10 118 1.2E-17 T 23-10-2018 IPR013656 PAS fold-4 DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SUPERFAMILY SSF55785 115 239 6.98E-18 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SMART SM00086 77 119 79.0 T 23-10-2018 IPR001610 PAC motif DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SMART SM00086 336 376 55.0 T 23-10-2018 IPR001610 PAC motif DLM_2043 544dc3a9bb8ce61fa6a2f128e9f8e667 593 SMART SM00086 206 248 1.0 T 23-10-2018 IPR001610 PAC motif DLM_3197 97840c2a9a9cdcf91156c8b9b3c4dfa9 222 PRINTS PR00502 NUDIX hydrolase family signature 67 81 9.8E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DLM_3197 97840c2a9a9cdcf91156c8b9b3c4dfa9 222 PRINTS PR00502 NUDIX hydrolase family signature 81 96 9.8E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DLM_3197 97840c2a9a9cdcf91156c8b9b3c4dfa9 222 Gene3D G3DSA:3.90.79.10 34 193 3.1E-43 T 23-10-2018 DLM_3197 97840c2a9a9cdcf91156c8b9b3c4dfa9 222 SUPERFAMILY SSF55811 37 186 1.9E-31 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_3197 97840c2a9a9cdcf91156c8b9b3c4dfa9 222 Pfam PF00293 NUDIX domain 41 170 4.8E-21 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_3197 97840c2a9a9cdcf91156c8b9b3c4dfa9 222 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 35 190 37.547 T 23-10-2018 IPR022927 RNA pyrophosphohydrolase RppH DLM_3197 97840c2a9a9cdcf91156c8b9b3c4dfa9 222 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 SMART SM00448 183 308 4.0E-10 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 Pfam PF01584 CheW-like domain 25 164 2.7E-37 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 SMART SM00260 21 162 2.6E-30 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 SUPERFAMILY SSF50341 21 164 6.67E-32 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 Gene3D G3DSA:2.30.30.40 28 156 8.7E-31 T 23-10-2018 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 Gene3D G3DSA:2.40.50.180 43 162 8.7E-31 T 23-10-2018 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 SUPERFAMILY SSF52172 185 313 3.56E-21 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 Gene3D G3DSA:3.40.50.2300 181 314 3.9E-22 T 23-10-2018 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 Pfam PF00072 Response regulator receiver domain 186 302 1.6E-13 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0939 e4daf8301eb99e3fbc45ef5dff264023 314 PIRSF PIRSF002867 5 314 1.5E-101 T 23-10-2018 IPR024181 Chemotaxis response regulator CheV DLM_1329 6330b7d5a2a0cd8912caddef9bdae04c 153 Gene3D G3DSA:3.30.450.150 10 141 5.7E-38 T 23-10-2018 IPR038084 GlcG-like domain superfamily DLM_1329 6330b7d5a2a0cd8912caddef9bdae04c 153 Pfam PF03928 Haem-degrading 14 136 1.3E-25 T 23-10-2018 IPR005624 Haem-degrading DLM_1329 6330b7d5a2a0cd8912caddef9bdae04c 153 SUPERFAMILY SSF143744 13 140 3.14E-33 T 23-10-2018 IPR038084 GlcG-like domain superfamily DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 SUPERFAMILY SSF52833 111 204 2.62E-23 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 448 464 3.8E-39 T 23-10-2018 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 321 339 3.8E-39 T 23-10-2018 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 222 241 3.8E-39 T 23-10-2018 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 363 381 3.8E-39 T 23-10-2018 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 474 496 3.8E-39 T 23-10-2018 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 9 523 8.4E-243 T 23-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 Gene3D G3DSA:3.40.30.80 9 207 6.2E-65 T 23-10-2018 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 Gene3D G3DSA:3.50.50.60 220 514 1.2E-109 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 Pfam PF13192 Thioredoxin domain 128 202 3.4E-9 T 23-10-2018 IPR012336 Thioredoxin-like fold DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 322 330 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 273 283 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 221 243 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 411 427 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 344 356 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 484 502 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 359 383 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 253 268 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 450 471 7.2E-66 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 220 510 5.2E-47 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 SUPERFAMILY SSF51905 214 520 9.26E-51 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 PIRSF PIRSF000238 9 524 1.4E-261 T 23-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 Gene3D G3DSA:3.50.50.60 333 456 1.2E-109 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 SUPERFAMILY SSF52833 9 109 6.04E-29 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3788 c2abb53f8b66256a31d0ce181bff0877 524 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 351 371 - T 23-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DLM_3840 7be35a9f16c06088d1b2a550d1222171 328 Pfam PF13515 Fusaric acid resistance protein-like 186 304 1.1E-10 T 23-10-2018 DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 SMART SM00344 4 113 4.5E-37 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 SUPERFAMILY SSF54909 65 152 4.42E-21 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 Gene3D G3DSA:3.30.70.920 58 141 2.6E-25 T 23-10-2018 DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 4.0E-12 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 4.0E-12 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 4.0E-12 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 SUPERFAMILY SSF46785 4 63 3.2E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 Gene3D G3DSA:1.10.10.10 1 57 1.4E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 2.0E-12 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_0922 89df16398c71456750b1b0d1e66eb92f 161 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 1.0E-21 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 SMART SM00304 157 211 0.0026 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 SUPERFAMILY SSF55874 333 486 2.23E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 5.4E-19 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 5.4E-19 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 5.4E-19 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 5.4E-19 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 SUPERFAMILY SSF47384 244 326 1.9E-5 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 Gene3D G3DSA:3.30.565.10 326 487 3.7E-43 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 SMART SM00387 375 488 3.2E-28 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 324 3.1E-6 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 485 5.2E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0247 d49a5b7365022b0020b0c06965c7912e 498 Gene3D G3DSA:1.10.287.130 225 325 1.6E-19 T 23-10-2018 DLM_3522 0c8af204ba1ef07809b81a7b188e2522 575 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 5 308 4.7E-73 T 23-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 DLM_3522 0c8af204ba1ef07809b81a7b188e2522 575 SUPERFAMILY SSF109755 323 532 1.05E-37 T 23-10-2018 DLM_3522 0c8af204ba1ef07809b81a7b188e2522 575 Gene3D G3DSA:1.20.58.220 444 539 1.4E-7 T 23-10-2018 IPR038078 PhoU-like domain superfamily DLM_3522 0c8af204ba1ef07809b81a7b188e2522 575 Gene3D G3DSA:1.20.58.220 336 435 6.1E-14 T 23-10-2018 IPR038078 PhoU-like domain superfamily DLM_3522 0c8af204ba1ef07809b81a7b188e2522 575 Pfam PF01895 PhoU domain 451 528 1.8E-6 T 23-10-2018 IPR026022 PhoU domain DLM_3522 0c8af204ba1ef07809b81a7b188e2522 575 Pfam PF01895 PhoU domain 343 422 6.7E-13 T 23-10-2018 IPR026022 PhoU domain DLM_3522 0c8af204ba1ef07809b81a7b188e2522 575 Pfam PF02690 Na+/Pi-cotransporter 162 228 1.7E-11 T 23-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DLM_3522 0c8af204ba1ef07809b81a7b188e2522 575 Pfam PF02690 Na+/Pi-cotransporter 15 149 1.5E-36 T 23-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DLM_3830 42a15a8fb23852862a0fc1167c4b725d 235 SUPERFAMILY SSF74653 147 227 1.83E-20 T 23-10-2018 DLM_3830 42a15a8fb23852862a0fc1167c4b725d 235 Gene3D G3DSA:3.30.1150.10 144 230 1.8E-20 T 23-10-2018 DLM_3830 42a15a8fb23852862a0fc1167c4b725d 235 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 153 230 1.9E-19 T 23-10-2018 IPR006260 TonB/TolA, C-terminal DLM_3830 42a15a8fb23852862a0fc1167c4b725d 235 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 151 229 4.2E-19 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 PRINTS PR00046 Major sigma-70 factor signature 249 264 8.1E-19 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 PRINTS PR00046 Major sigma-70 factor signature 229 241 8.1E-19 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 PRINTS PR00046 Major sigma-70 factor signature 77 90 8.1E-19 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 PRINTS PR00046 Major sigma-70 factor signature 264 275 8.1E-19 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 Pfam PF00140 Sigma-70 factor, region 1.2 15 45 1.3E-8 T 23-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 281 51.261 T 23-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 280 3.8E-122 T 23-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 Gene3D G3DSA:1.10.601.10 15 125 1.8E-29 T 23-10-2018 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 249 275 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 Pfam PF04545 Sigma-70, region 4 225 276 4.5E-15 T 23-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 Gene3D G3DSA:1.20.140.160 142 282 1.1E-16 T 23-10-2018 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 SUPERFAMILY SSF88659 186 281 2.8E-18 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 Pfam PF04542 Sigma-70 region 2 54 122 1.5E-14 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 SUPERFAMILY SSF88946 11 122 3.4E-40 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DLM_4364 5937afba1b50ee2783889b8cf30cff0a 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 279 2.3E-28 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SMART SM00086 481 523 1.3E-4 T 23-10-2018 IPR001610 PAC motif DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SMART SM00086 356 394 3.7 T 23-10-2018 IPR001610 PAC motif DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SUPERFAMILY SSF55785 520 633 5.23E-9 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Gene3D G3DSA:3.30.450.20 286 406 2.6E-20 T 23-10-2018 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Gene3D G3DSA:3.30.450.20 407 533 3.7E-25 T 23-10-2018 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 404 530 7.7E-23 T 23-10-2018 IPR000014 PAS domain DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 286 401 2.3E-20 T 23-10-2018 IPR000014 PAS domain DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SMART SM00388 657 727 2.8E-5 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SMART SM00387 769 880 2.0E-30 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SUPERFAMILY SSF55785 298 403 1.14E-20 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 858 2.4E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 877 2.4E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 829 839 2.4E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 811 825 2.4E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Gene3D G3DSA:1.10.287.130 662 724 1.5E-17 T 23-10-2018 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Gene3D G3DSA:3.30.450.20 534 648 2.8E-5 T 23-10-2018 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Pfam PF13426 PAS domain 422 522 4.1E-14 T 23-10-2018 IPR000014 PAS domain DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 770 878 2.9E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Pfam PF08447 PAS fold 306 380 1.7E-11 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 658 724 9.6E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Gene3D G3DSA:3.30.565.10 726 881 1.2E-37 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SUPERFAMILY SSF55785 391 521 1.93E-23 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SUPERFAMILY SSF55874 719 878 8.64E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SUPERFAMILY SSF47384 644 725 5.89E-8 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 Gene3D G3DSA:3.30.450.20 36 181 2.3E-9 T 23-10-2018 DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SMART SM00091 535 595 10.0 T 23-10-2018 IPR000014 PAS domain DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SMART SM00091 406 474 2.6E-6 T 23-10-2018 IPR000014 PAS domain DLM_2623 0b2e2f6f01ba58a9bb0cf95ef275bf75 881 SMART SM00091 283 349 8.5E-9 T 23-10-2018 IPR000014 PAS domain DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 SUPERFAMILY SSF109604 330 519 1.88E-32 T 23-10-2018 DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 Gene3D G3DSA:1.10.3210.10 317 522 4.7E-68 T 23-10-2018 DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 Pfam PF11849 Domain of unknown function (DUF3369) 153 320 8.8E-47 T 23-10-2018 IPR021800 Domain of unknown function DUF3369 DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 Gene3D G3DSA:3.40.50.2300 15 175 2.4E-16 T 23-10-2018 DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 Pfam PF01966 HD domain 343 478 5.7E-14 T 23-10-2018 IPR006674 HD domain DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 SMART SM00471 338 488 1.8E-6 T 23-10-2018 IPR003607 HD/PDEase domain DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 Pfam PF00072 Response regulator receiver domain 33 143 5.0E-10 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 SMART SM00448 31 153 9.2E-4 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0246 2377b2f8d3b3652444d608ec2744a3d5 527 SUPERFAMILY SSF52172 27 163 1.99E-14 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2118 590877205c61de2aaead3e8f22b38539 244 Gene3D G3DSA:3.40.190.10 47 242 3.7E-15 T 23-10-2018 DLM_2118 590877205c61de2aaead3e8f22b38539 244 SUPERFAMILY SSF53850 47 243 7.39E-20 T 23-10-2018 DLM_2118 590877205c61de2aaead3e8f22b38539 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 243 3.6E-11 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2118 590877205c61de2aaead3e8f22b38539 244 Gene3D G3DSA:3.40.190.10 110 203 3.7E-15 T 23-10-2018 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 Gene3D G3DSA:2.30.30.30 101 160 2.7E-26 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 Gene3D G3DSA:3.30.70.940 1 100 1.9E-37 T 23-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 SUPERFAMILY SSF82679 1 96 5.36E-30 T 23-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 SUPERFAMILY SSF50104 104 160 5.01E-20 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 ProSitePatterns PS01014 Transcription termination factor nusG signature. 143 152 - T 23-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 1 160 2.4E-64 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 PRINTS PR00338 Transcription termination factor NUSG signature 136 152 3.9E-20 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 PRINTS PR00338 Transcription termination factor NUSG signature 40 52 3.9E-20 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 PRINTS PR00338 Transcription termination factor NUSG signature 118 133 3.9E-20 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 160 19.295 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 SMART SM00738 1 94 1.8E-32 T 23-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 SMART SM00739 106 133 1.7E-4 T 23-10-2018 IPR005824 KOW DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 Pfam PF00467 KOW motif 109 140 2.7E-5 T 23-10-2018 IPR005824 KOW DLM_4378 d2ffded1a5a4bf96513b3b6be508b378 160 Pfam PF02357 Transcription termination factor nusG 4 91 6.8E-21 T 23-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DLM_0401 c1fe6525edb7bb17a63caff82938167f 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 106 204 7.9E-33 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 SUPERFAMILY SSF46785 24 132 3.31E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 Gene3D G3DSA:3.40.190.290 112 315 4.3E-47 T 23-10-2018 DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 Pfam PF03466 LysR substrate binding domain 109 316 1.5E-35 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 84 3.0E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 SUPERFAMILY SSF53850 110 319 2.02E-38 T 23-10-2018 DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 2.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 2.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2194 1425b6981c77fce17d7fe3b67c7b8786 341 Gene3D G3DSA:1.10.10.10 24 110 9.1E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 Gene3D G3DSA:3.90.1170.30 336 426 2.9E-126 T 23-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 23-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 7.7E-41 T 23-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 1.5E-216 T 23-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.4E-150 T 23-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 SUPERFAMILY SSF47648 2 69 2.35E-20 T 23-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 Gene3D G3DSA:1.20.970.10 4 68 1.2E-23 T 23-10-2018 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 45.768 T 23-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 SUPERFAMILY SSF54680 337 438 9.55E-27 T 23-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 SUPERFAMILY SSF52418 72 333 3.14E-86 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 2.1E-20 T 23-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 PIRSF PIRSF000478 1 440 1.3E-142 T 23-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 2.0E-18 T 23-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 Gene3D G3DSA:3.40.1030.10 80 335 2.9E-126 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_3335 ba1e4ae38f6e086c0ccd8332d80bf662 447 SMART SM00941 350 424 7.8E-23 T 23-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_1708 ac7eefa4122aac0766766fac8d2c3be4 215 Gene3D G3DSA:3.10.20.740 4 93 3.6E-5 T 23-10-2018 DLM_1708 ac7eefa4122aac0766766fac8d2c3be4 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 153 164 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_1708 ac7eefa4122aac0766766fac8d2c3be4 215 SUPERFAMILY SSF46548 68 169 9.94E-12 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_1708 ac7eefa4122aac0766766fac8d2c3be4 215 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 70 8.4E-5 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DLM_1708 ac7eefa4122aac0766766fac8d2c3be4 215 Gene3D G3DSA:1.10.1060.10 103 179 3.3E-14 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_1708 ac7eefa4122aac0766766fac8d2c3be4 215 SUPERFAMILY SSF54292 3 82 3.28E-11 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_3336 59eb316624ed3d0a92647a3daea27d85 266 Pfam PF01791 DeoC/LacD family aldolase 23 252 8.6E-39 T 23-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DLM_3336 59eb316624ed3d0a92647a3daea27d85 266 SUPERFAMILY SSF51569 17 253 7.43E-77 T 23-10-2018 DLM_3336 59eb316624ed3d0a92647a3daea27d85 266 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 22 234 5.8E-66 T 23-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DLM_3336 59eb316624ed3d0a92647a3daea27d85 266 PIRSF PIRSF001357 17 261 3.6E-76 T 23-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DLM_3336 59eb316624ed3d0a92647a3daea27d85 266 SMART SM01133 21 253 9.3E-72 T 23-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DLM_3336 59eb316624ed3d0a92647a3daea27d85 266 Gene3D G3DSA:3.20.20.70 12 264 8.0E-93 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1338 5ff98d33b23f9f64113aeb1f72044ee7 103 SUPERFAMILY SSF54909 1 74 6.97E-12 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_1338 5ff98d33b23f9f64113aeb1f72044ee7 103 Pfam PF03795 YCII-related domain 1 70 1.6E-5 T 23-10-2018 IPR005545 YCII-related DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 SUPERFAMILY SSF46785 3 85 1.04E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 SUPERFAMILY SSF53850 91 295 1.72E-41 T 23-10-2018 DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 Pfam PF03466 LysR substrate binding domain 91 290 7.0E-38 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 Gene3D G3DSA:3.40.190.10 102 287 4.9E-56 T 23-10-2018 DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.1E-21 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 Gene3D G3DSA:1.10.10.10 6 95 1.3E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2021 58e4382d2aec46ed12ba6b4826cda3c0 314 Gene3D G3DSA:3.40.190.10 162 260 4.9E-56 T 23-10-2018 DLM_1136 3474bec818bd5834f65f5d46bd47657d 315 SUPERFAMILY SSF51735 1 261 1.07E-52 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1136 3474bec818bd5834f65f5d46bd47657d 315 Pfam PF13460 NAD(P)H-binding 10 154 3.4E-25 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_1136 3474bec818bd5834f65f5d46bd47657d 315 Gene3D G3DSA:3.40.50.720 5 296 3.2E-50 T 23-10-2018 DLM_4026 28ceeba8e36714aaa477ecdd169a2230 101 Gene3D G3DSA:1.10.760.10 21 101 1.7E-34 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4026 28ceeba8e36714aaa477ecdd169a2230 101 SUPERFAMILY SSF46626 23 100 1.63E-18 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4026 28ceeba8e36714aaa477ecdd169a2230 101 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 97 7.0E-7 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_4026 28ceeba8e36714aaa477ecdd169a2230 101 PRINTS PR00606 Class ID cytochrome C signature 24 37 1.5E-24 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_4026 28ceeba8e36714aaa477ecdd169a2230 101 PRINTS PR00606 Class ID cytochrome C signature 39 52 1.5E-24 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_4026 28ceeba8e36714aaa477ecdd169a2230 101 PRINTS PR00606 Class ID cytochrome C signature 62 75 1.5E-24 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_4026 28ceeba8e36714aaa477ecdd169a2230 101 PRINTS PR00606 Class ID cytochrome C signature 77 87 1.5E-24 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_4026 28ceeba8e36714aaa477ecdd169a2230 101 PRINTS PR00606 Class ID cytochrome C signature 89 99 1.5E-24 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_0320 0681f458a4769e6eaba02f1f05e14ab2 465 Pfam PF00929 Exonuclease 9 158 4.5E-29 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_0320 0681f458a4769e6eaba02f1f05e14ab2 465 SUPERFAMILY SSF53098 2 181 3.04E-48 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0320 0681f458a4769e6eaba02f1f05e14ab2 465 Gene3D G3DSA:3.30.420.10 6 174 3.9E-43 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0320 0681f458a4769e6eaba02f1f05e14ab2 465 SMART SM00479 6 170 2.1E-41 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_0320 0681f458a4769e6eaba02f1f05e14ab2 465 Gene3D G3DSA:3.40.1440.10 191 282 4.7E-14 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DLM_0320 0681f458a4769e6eaba02f1f05e14ab2 465 SUPERFAMILY SSF82771 201 279 1.83E-5 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Gene3D G3DSA:1.20.1640.10 507 1009 2.4E-225 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Gene3D G3DSA:3.30.70.1430 558 657 2.4E-225 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Gene3D G3DSA:3.30.70.1440 658 857 2.4E-225 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 SUPERFAMILY SSF82693 557 642 6.63E-5 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 SUPERFAMILY SSF82714 190 271 2.49E-13 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 SUPERFAMILY SSF82693 45 139 2.96E-15 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 SUPERFAMILY SSF82693 142 328 2.35E-13 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 4.6E-143 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Gene3D G3DSA:1.20.1640.10 17 506 2.4E-225 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.0E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 2.0E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 2.0E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.0E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 2.0E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 2.0E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 SUPERFAMILY SSF82866 793 1016 2.35E-42 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 SUPERFAMILY SSF82714 710 795 7.19E-13 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 SUPERFAMILY SSF82866 298 493 1.96E-34 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Gene3D G3DSA:3.30.70.1430 45 805 2.4E-225 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Gene3D G3DSA:3.30.70.1320 142 331 2.4E-225 T 23-10-2018 DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Gene3D G3DSA:3.30.2090.10 184 273 2.4E-225 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0528 292cb75a88aae677ec8f9461cda8c642 1022 Gene3D G3DSA:3.30.2090.10 709 797 2.4E-225 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.1E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.1E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.0E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.0E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.0E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 6.0E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.0E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.0E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 260 6.5E-100 T 23-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 DLM_2799 d237b271b7428c9108eafaf346718cb9 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_2799 d237b271b7428c9108eafaf346718cb9 260 Gene3D G3DSA:3.40.50.720 1 260 1.0E-78 T 23-10-2018 DLM_2799 d237b271b7428c9108eafaf346718cb9 260 Pfam PF00106 short chain dehydrogenase 6 198 9.5E-54 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2799 d237b271b7428c9108eafaf346718cb9 260 SUPERFAMILY SSF51735 4 259 6.58E-74 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1691 136cc8936ceca3482d29a812152a3f69 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.7E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1691 136cc8936ceca3482d29a812152a3f69 296 SUPERFAMILY SSF53850 93 292 7.76E-26 T 23-10-2018 DLM_1691 136cc8936ceca3482d29a812152a3f69 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1691 136cc8936ceca3482d29a812152a3f69 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1691 136cc8936ceca3482d29a812152a3f69 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1691 136cc8936ceca3482d29a812152a3f69 296 Gene3D G3DSA:1.10.10.10 2 87 1.3E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1691 136cc8936ceca3482d29a812152a3f69 296 Pfam PF03466 LysR substrate binding domain 91 292 2.7E-24 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1691 136cc8936ceca3482d29a812152a3f69 296 Gene3D G3DSA:3.40.190.290 95 294 1.1E-19 T 23-10-2018 DLM_1691 136cc8936ceca3482d29a812152a3f69 296 SUPERFAMILY SSF46785 2 84 4.42E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3429 6187420c5c670104c2a0aff34e722549 1064 Gene3D G3DSA:3.40.50.10930 4 275 2.5E-93 T 23-10-2018 DLM_3429 6187420c5c670104c2a0aff34e722549 1064 SUPERFAMILY SSF52540 1 307 2.5E-95 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3429 6187420c5c670104c2a0aff34e722549 1064 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1063 19.452 T 23-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DLM_3429 6187420c5c670104c2a0aff34e722549 1064 PIRSF PIRSF000980 1 1064 0.0 T 23-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DLM_3429 6187420c5c670104c2a0aff34e722549 1064 SUPERFAMILY SSF52540 317 735 3.51E-87 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3429 6187420c5c670104c2a0aff34e722549 1064 Gene3D G3DSA:1.10.486.10 405 617 1.5E-155 T 23-10-2018 DLM_3429 6187420c5c670104c2a0aff34e722549 1064 Gene3D G3DSA:1.10.10.160 79 178 2.5E-93 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily DLM_3429 6187420c5c670104c2a0aff34e722549 1064 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 745 3.0E-262 T 23-10-2018 DLM_3429 6187420c5c670104c2a0aff34e722549 1064 SUPERFAMILY SSF52980 766 1059 4.99E-57 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DLM_3429 6187420c5c670104c2a0aff34e722549 1064 Gene3D G3DSA:3.40.50.300 295 745 1.5E-155 T 23-10-2018 DLM_3429 6187420c5c670104c2a0aff34e722549 1064 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 3 1015 8.9E-294 T 23-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 7.9E-113 T 23-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 Pfam PF04055 Radical SAM superfamily 18 178 6.3E-26 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 23-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 326 38.463 T 23-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 Gene3D G3DSA:3.20.20.70 1 326 3.1E-88 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 185 310 3.7E-35 T 23-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 SMART SM00729 13 215 4.2E-5 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 Pfam PF13353 4Fe-4S single cluster domain 21 82 8.6E-8 T 23-10-2018 DLM_4540 086fca1bf63ee81d7a9128c2454f11d5 326 SUPERFAMILY SSF102114 4 281 3.79E-73 T 23-10-2018 DLM_4015 8fe4a2cf4b4bdab7dbd9d74947f56822 299 Gene3D G3DSA:3.40.190.10 28 273 1.6E-100 T 23-10-2018 DLM_4015 8fe4a2cf4b4bdab7dbd9d74947f56822 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 268 3.3E-51 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_4015 8fe4a2cf4b4bdab7dbd9d74947f56822 299 SUPERFAMILY SSF53850 6 270 3.26E-66 T 23-10-2018 DLM_4015 8fe4a2cf4b4bdab7dbd9d74947f56822 299 Gene3D G3DSA:3.40.190.10 132 227 1.6E-100 T 23-10-2018 DLM_4015 8fe4a2cf4b4bdab7dbd9d74947f56822 299 SMART SM00062 38 270 1.1E-61 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 Gene3D G3DSA:2.60.120.10 6 77 3.0E-7 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 6.5E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 6.5E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 Gene3D G3DSA:1.10.10.60 135 244 1.8E-30 T 23-10-2018 DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 SUPERFAMILY SSF46689 194 241 4.66E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 SMART SM00342 157 240 1.7E-32 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 SUPERFAMILY SSF46689 140 191 3.31E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 Pfam PF12833 Helix-turn-helix domain 163 240 9.3E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3903 d4e0b7f28c0e3608b373e89cfa67403e 244 SUPERFAMILY SSF51182 19 111 5.34E-8 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_0933 5935c82dee0917e32051004709db8e2b 285 SUPERFAMILY SSF53474 22 283 2.61E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0933 5935c82dee0917e32051004709db8e2b 285 Gene3D G3DSA:3.40.50.1820 19 284 6.0E-69 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0933 5935c82dee0917e32051004709db8e2b 285 Pfam PF00756 Putative esterase 33 187 2.7E-22 T 23-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DLM_1744 cfa8ccc298abecfc8a0ccb2af30ecd7b 451 Gene3D G3DSA:3.60.21.10 41 328 1.2E-84 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like DLM_1744 cfa8ccc298abecfc8a0ccb2af30ecd7b 451 Pfam PF00149 Calcineurin-like phosphoesterase 48 139 7.5E-12 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DLM_1744 cfa8ccc298abecfc8a0ccb2af30ecd7b 451 Gene3D G3DSA:3.30.160.720 329 393 2.6E-18 T 23-10-2018 DLM_1744 cfa8ccc298abecfc8a0ccb2af30ecd7b 451 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 48 305 1.0E-67 T 23-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 DLM_1744 cfa8ccc298abecfc8a0ccb2af30ecd7b 451 SUPERFAMILY SSF56300 48 390 9.44E-55 T 23-10-2018 DLM_1744 cfa8ccc298abecfc8a0ccb2af30ecd7b 451 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 327 425 1.1E-25 T 23-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain DLM_0578 34791d1ae088ecd6aba795f3a838f97d 383 SUPERFAMILY SSF55681 4 323 3.4E-54 T 23-10-2018 DLM_0578 34791d1ae088ecd6aba795f3a838f97d 383 Gene3D G3DSA:3.30.930.10 4 327 2.2E-67 T 23-10-2018 DLM_0578 34791d1ae088ecd6aba795f3a838f97d 383 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 364 34.413 T 23-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 DLM_0578 34791d1ae088ecd6aba795f3a838f97d 383 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 12 319 1.4E-83 T 23-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 DLM_0578 34791d1ae088ecd6aba795f3a838f97d 383 PIRSF PIRSF001549 6 350 4.5E-40 T 23-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DLM_0578 34791d1ae088ecd6aba795f3a838f97d 383 Pfam PF13393 Histidyl-tRNA synthetase 10 315 8.6E-112 T 23-10-2018 DLM_3740 8c12d2204262c65479d9131abd19edf3 212 SUPERFAMILY SSF53955 80 196 1.41E-29 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_3740 8c12d2204262c65479d9131abd19edf3 212 Pfam PF01464 Transglycosylase SLT domain 85 177 1.4E-18 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 DLM_3740 8c12d2204262c65479d9131abd19edf3 212 Gene3D G3DSA:1.10.530.10 77 202 6.5E-24 T 23-10-2018 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 Pfam PF01842 ACT domain 265 325 2.4E-8 T 23-10-2018 IPR002912 ACT domain DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 Gene3D G3DSA:3.40.1160.10 1 255 7.0E-92 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 SUPERFAMILY SSF55021 332 405 7.56E-24 T 23-10-2018 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 PIRSF PIRSF000726 1 62 4.8E-23 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 PIRSF PIRSF000726 58 408 1.5E-150 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 Gene3D G3DSA:3.30.70.260 256 404 6.1E-59 T 23-10-2018 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 Pfam PF13840 ACT domain 337 400 2.3E-15 T 23-10-2018 IPR027795 CASTOR, ACT domain DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 SUPERFAMILY SSF53633 4 242 4.32E-77 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 SUPERFAMILY SSF55021 249 327 8.02E-18 T 23-10-2018 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 Pfam PF00696 Amino acid kinase family 3 229 7.7E-52 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 61 403 5.4E-122 T 23-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 Gene3D G3DSA:3.30.70.260 262 339 6.1E-59 T 23-10-2018 DLM_0221 dc6e1f5d2bd4b1e3b55b562814e6471f 408 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 403 1.9E-134 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DLM_1534 40b50b270b1ae1869747710c65443748 523 SMART SM00382 282 476 0.76 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1534 40b50b270b1ae1869747710c65443748 523 SMART SM00382 33 221 2.4E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1534 40b50b270b1ae1869747710c65443748 523 Pfam PF00005 ABC transporter 24 174 2.9E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1534 40b50b270b1ae1869747710c65443748 523 Pfam PF00005 ABC transporter 273 427 8.9E-21 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1534 40b50b270b1ae1869747710c65443748 523 Gene3D G3DSA:3.40.50.300 261 495 5.6E-41 T 23-10-2018 DLM_1534 40b50b270b1ae1869747710c65443748 523 SUPERFAMILY SSF52540 5 232 2.54E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1534 40b50b270b1ae1869747710c65443748 523 SUPERFAMILY SSF52540 273 479 6.1E-40 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1534 40b50b270b1ae1869747710c65443748 523 Gene3D G3DSA:3.40.50.300 3 243 5.6E-55 T 23-10-2018 DLM_1534 40b50b270b1ae1869747710c65443748 523 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2901 6bd230e12adb8a462b24331aad0eec37 200 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 185 3.5E-46 T 23-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DLM_2901 6bd230e12adb8a462b24331aad0eec37 200 SUPERFAMILY SSF53067 4 78 4.14E-18 T 23-10-2018 DLM_2901 6bd230e12adb8a462b24331aad0eec37 200 Gene3D G3DSA:3.30.420.40 3 188 3.7E-49 T 23-10-2018 DLM_2901 6bd230e12adb8a462b24331aad0eec37 200 SUPERFAMILY SSF53067 82 176 7.64E-13 T 23-10-2018 DLM_2901 6bd230e12adb8a462b24331aad0eec37 200 Pfam PF00814 Glycoprotease family 7 102 1.2E-24 T 23-10-2018 IPR000905 Gcp-like domain DLM_2901 6bd230e12adb8a462b24331aad0eec37 200 Gene3D G3DSA:3.30.420.40 72 156 3.7E-49 T 23-10-2018 DLM_2932 922ba8d15051e308a86aa561c5ed4d09 175 Pfam PF00857 Isochorismatase family 6 162 1.4E-34 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 DLM_2932 922ba8d15051e308a86aa561c5ed4d09 175 Gene3D G3DSA:3.40.50.850 2 172 5.0E-39 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_2932 922ba8d15051e308a86aa561c5ed4d09 175 SUPERFAMILY SSF52499 4 164 4.71E-46 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_2335 62e21b420adc17bd83e4f1a9cc1d207c 146 SUPERFAMILY SSF52833 12 128 4.29E-18 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_2335 62e21b420adc17bd83e4f1a9cc1d207c 146 Pfam PF07449 Hydrogenase-1 expression protein HyaE 9 113 5.8E-31 T 23-10-2018 IPR010893 [NiFe]-hydrogenase maturation factor HyaE DLM_2335 62e21b420adc17bd83e4f1a9cc1d207c 146 Gene3D G3DSA:3.40.30.10 2 130 1.7E-36 T 23-10-2018 DLM_2335 62e21b420adc17bd83e4f1a9cc1d207c 146 PIRSF PIRSF038934 1 135 4.4E-29 T 23-10-2018 IPR010893 [NiFe]-hydrogenase maturation factor HyaE DLM_2558 9c3047616fe578764b344a2f6a6fbfc3 236 SUPERFAMILY SSF52540 3 235 1.66E-61 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2558 9c3047616fe578764b344a2f6a6fbfc3 236 SMART SM00382 28 230 2.6E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2558 9c3047616fe578764b344a2f6a6fbfc3 236 PIRSF PIRSF039137 1 236 8.9E-110 T 23-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 DLM_2558 9c3047616fe578764b344a2f6a6fbfc3 236 Pfam PF00005 ABC transporter 20 164 2.0E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2558 9c3047616fe578764b344a2f6a6fbfc3 236 Gene3D G3DSA:3.40.50.300 2 236 1.6E-66 T 23-10-2018 DLM_2558 9c3047616fe578764b344a2f6a6fbfc3 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2282 614ddb06fca22ae99ad660bfea954117 66 Gene3D G3DSA:2.60.260.40 5 58 1.2E-10 T 23-10-2018 DLM_2282 614ddb06fca22ae99ad660bfea954117 66 Pfam PF10276 Zinc-finger domain 33 56 6.8E-8 T 23-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1668 bb018191c75b30c2703bd8da4582984f 246 Gene3D G3DSA:2.60.120.10 11 153 3.1E-26 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_1668 bb018191c75b30c2703bd8da4582984f 246 SMART SM00419 175 223 3.2E-6 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_1668 bb018191c75b30c2703bd8da4582984f 246 SUPERFAMILY SSF46785 157 231 1.18E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1668 bb018191c75b30c2703bd8da4582984f 246 SMART SM00100 19 140 7.7E-16 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_1668 bb018191c75b30c2703bd8da4582984f 246 Pfam PF13545 Crp-like helix-turn-helix domain 158 228 3.5E-14 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_1668 bb018191c75b30c2703bd8da4582984f 246 Gene3D G3DSA:1.10.10.10 157 235 1.8E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1668 bb018191c75b30c2703bd8da4582984f 246 Pfam PF00027 Cyclic nucleotide-binding domain 39 123 3.6E-18 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_1668 bb018191c75b30c2703bd8da4582984f 246 SUPERFAMILY SSF51206 14 147 6.28E-28 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like DLM_2523 aa1eac25c0f9958d4984201d816da653 112 Gene3D G3DSA:1.10.3730.20 3 112 1.1E-38 T 23-10-2018 DLM_2523 aa1eac25c0f9958d4984201d816da653 112 SUPERFAMILY SSF103481 8 108 6.41E-21 T 23-10-2018 DLM_2523 aa1eac25c0f9958d4984201d816da653 112 Pfam PF00893 Small Multidrug Resistance protein 5 96 2.4E-29 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DLM_3169 897050929efae0d8eeca3d72d28d4e4f 209 SUPERFAMILY SSF52540 4 205 7.71E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3169 897050929efae0d8eeca3d72d28d4e4f 209 Hamap MF_00165 Thymidylate kinase [tmk]. 7 206 28.617 T 23-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DLM_3169 897050929efae0d8eeca3d72d28d4e4f 209 Gene3D G3DSA:3.40.50.300 2 209 1.1E-63 T 23-10-2018 DLM_3169 897050929efae0d8eeca3d72d28d4e4f 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 6 198 3.1E-54 T 23-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DLM_3169 897050929efae0d8eeca3d72d28d4e4f 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 23-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DLM_3169 897050929efae0d8eeca3d72d28d4e4f 209 Pfam PF02223 Thymidylate kinase 11 198 6.7E-48 T 23-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 DLM_3918 728223184bf92700271c07dcf6787bea 333 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 23-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 DLM_3918 728223184bf92700271c07dcf6787bea 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 11 329 9.2E-156 T 23-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 DLM_3918 728223184bf92700271c07dcf6787bea 333 Gene3D G3DSA:3.40.190.10 30 298 2.6E-136 T 23-10-2018 DLM_3918 728223184bf92700271c07dcf6787bea 333 Pfam PF13531 Bacterial extracellular solute-binding protein 42 283 2.1E-43 T 23-10-2018 DLM_3918 728223184bf92700271c07dcf6787bea 333 SUPERFAMILY SSF53850 23 330 5.3E-92 T 23-10-2018 DLM_3918 728223184bf92700271c07dcf6787bea 333 Gene3D G3DSA:3.40.190.10 117 328 2.6E-136 T 23-10-2018 DLM_2651 31baa3b4a383c982d5e49bfd79473610 436 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.289 T 23-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 DLM_2651 31baa3b4a383c982d5e49bfd79473610 436 Pfam PF01266 FAD dependent oxidoreductase 2 397 7.9E-73 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_2651 31baa3b4a383c982d5e49bfd79473610 436 Gene3D G3DSA:3.50.50.60 1 73 2.2E-13 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2651 31baa3b4a383c982d5e49bfd79473610 436 SUPERFAMILY SSF51905 1 417 8.67E-57 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2651 31baa3b4a383c982d5e49bfd79473610 436 Gene3D G3DSA:3.50.50.60 107 405 2.1E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2651 31baa3b4a383c982d5e49bfd79473610 436 SUPERFAMILY SSF54373 270 360 2.22E-17 T 23-10-2018 DLM_2651 31baa3b4a383c982d5e49bfd79473610 436 Gene3D G3DSA:3.30.9.10 134 362 2.1E-54 T 23-10-2018 DLM_2253 e39c6de39c3de3257e7693e21d6a28cd 366 Pfam PF13487 HD domain 247 309 1.8E-10 T 23-10-2018 DLM_2253 e39c6de39c3de3257e7693e21d6a28cd 366 SUPERFAMILY SSF109604 206 327 5.02E-13 T 23-10-2018 DLM_2253 e39c6de39c3de3257e7693e21d6a28cd 366 Gene3D G3DSA:1.10.3210.10 175 363 1.2E-30 T 23-10-2018 DLM_2253 e39c6de39c3de3257e7693e21d6a28cd 366 SMART SM00073 13 110 1.9E-7 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2253 e39c6de39c3de3257e7693e21d6a28cd 366 SUPERFAMILY SSF47226 13 134 8.78E-22 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2253 e39c6de39c3de3257e7693e21d6a28cd 366 Pfam PF01627 Hpt domain 24 106 9.8E-8 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2253 e39c6de39c3de3257e7693e21d6a28cd 366 Gene3D G3DSA:1.20.120.160 13 166 4.7E-19 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_3992 6cac4a13a94c4fcaaf1de608341fe020 291 Gene3D G3DSA:3.40.1190.20 5 283 5.0E-83 T 23-10-2018 IPR029056 Ribokinase-like DLM_3992 6cac4a13a94c4fcaaf1de608341fe020 291 Pfam PF08543 Phosphomethylpyrimidine kinase 29 271 1.1E-76 T 23-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DLM_3992 6cac4a13a94c4fcaaf1de608341fe020 291 SUPERFAMILY SSF53613 19 280 8.67E-72 T 23-10-2018 IPR029056 Ribokinase-like DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 SUPERFAMILY SSF143800 1 69 5.89E-28 T 23-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 PRINTS PR01249 Ribosomal protein L31 signature 32 47 1.4E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 PRINTS PR01249 Ribosomal protein L31 signature 47 65 1.4E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 Gene3D G3DSA:2.30.170.50 1 70 5.6E-34 T 23-10-2018 DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 Pfam PF01197 Ribosomal protein L31 1 66 1.6E-32 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 9.9E-36 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_0692 3c3ac01a405a22eab5313ceba402f147 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.025 T 23-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1344 2cd2c329822f699c4ada45321fe06e3d 107 SMART SM00418 17 97 7.0E-8 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_1344 2cd2c329822f699c4ada45321fe06e3d 107 Gene3D G3DSA:1.10.10.10 8 92 3.3E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1344 2cd2c329822f699c4ada45321fe06e3d 107 Pfam PF12840 Helix-turn-helix domain 18 76 1.0E-9 T 23-10-2018 DLM_1344 2cd2c329822f699c4ada45321fe06e3d 107 SUPERFAMILY SSF46785 7 97 4.42E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1344 2cd2c329822f699c4ada45321fe06e3d 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 1.4E-7 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_1344 2cd2c329822f699c4ada45321fe06e3d 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 1.4E-7 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_2947 13b910071e0afe69489d87b44dffa2c7 217 Gene3D G3DSA:3.40.109.10 1 217 2.5E-59 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_2947 13b910071e0afe69489d87b44dffa2c7 217 Pfam PF00881 Nitroreductase family 8 193 4.2E-26 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DLM_2947 13b910071e0afe69489d87b44dffa2c7 217 SUPERFAMILY SSF55469 1 216 5.76E-65 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_3301 3e562a885823703ac86f8b16fe59464e 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 52 5.8E-14 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3301 3e562a885823703ac86f8b16fe59464e 285 SUPERFAMILY SSF46785 1 100 2.56E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3301 3e562a885823703ac86f8b16fe59464e 285 Gene3D G3DSA:3.40.190.10 153 257 8.2E-19 T 23-10-2018 DLM_3301 3e562a885823703ac86f8b16fe59464e 285 SUPERFAMILY SSF53850 82 284 1.28E-24 T 23-10-2018 DLM_3301 3e562a885823703ac86f8b16fe59464e 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 11 22 1.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3301 3e562a885823703ac86f8b16fe59464e 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 32 1.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3301 3e562a885823703ac86f8b16fe59464e 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 1.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3301 3e562a885823703ac86f8b16fe59464e 285 Pfam PF03466 LysR substrate binding domain 83 281 3.4E-22 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3301 3e562a885823703ac86f8b16fe59464e 285 Gene3D G3DSA:3.40.190.10 83 268 8.2E-19 T 23-10-2018 DLM_3301 3e562a885823703ac86f8b16fe59464e 285 Gene3D G3DSA:1.10.10.10 1 78 6.9E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2032 272a6567cda431fe18c2980184a33e01 225 Gene3D G3DSA:1.10.3720.10 17 223 3.6E-45 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2032 272a6567cda431fe18c2980184a33e01 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 221 2.0E-20 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_2032 272a6567cda431fe18c2980184a33e01 225 SUPERFAMILY SSF161098 14 208 2.62E-42 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1893 4b36b18a5fe83f7f845b32490cc5e5f9 763 Gene3D G3DSA:3.40.50.300 8 259 6.1E-6 T 23-10-2018 DLM_1893 4b36b18a5fe83f7f845b32490cc5e5f9 763 Gene3D G3DSA:3.40.50.300 344 618 1.2E-12 T 23-10-2018 DLM_1893 4b36b18a5fe83f7f845b32490cc5e5f9 763 SUPERFAMILY SSF52540 18 603 2.08E-13 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1893 4b36b18a5fe83f7f845b32490cc5e5f9 763 Pfam PF13166 AAA domain 16 677 5.3E-33 T 23-10-2018 IPR026866 Protein CR006, P-loop domain DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 Gene3D G3DSA:1.10.166.10 1 70 5.3E-30 T 23-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 1.5E-25 T 23-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 1.4E-153 T 23-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 SUPERFAMILY SSF51161 2 256 9.98E-76 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.148 T 23-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 Gene3D G3DSA:2.160.10.10 87 257 7.9E-58 T 23-10-2018 DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.7E-13 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_4490 cd600ac20082950fa7a19d0b87a677e6 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0021 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_4087 c6879dba89480621ae75dd5bdf81ab57 304 SUPERFAMILY SSF56601 2 304 1.02E-109 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DLM_4087 c6879dba89480621ae75dd5bdf81ab57 304 Pfam PF04960 Glutaminase 21 304 1.2E-108 T 23-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DLM_4087 c6879dba89480621ae75dd5bdf81ab57 304 TIGRFAM TIGR03814 Gln_ase: glutaminase A 7 304 5.8E-122 T 23-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DLM_4087 c6879dba89480621ae75dd5bdf81ab57 304 Hamap MF_00313 Glutaminase [glsA]. 3 304 44.814 T 23-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DLM_4087 c6879dba89480621ae75dd5bdf81ab57 304 Gene3D G3DSA:3.40.710.10 1 304 7.0E-108 T 23-10-2018 DLM_4119 b40c8816db8eada31ed8e0a9d05127ff 225 Pfam PF03724 META domain 21 114 3.2E-18 T 23-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ DLM_4119 b40c8816db8eada31ed8e0a9d05127ff 225 Pfam PF14302 Domain of unknown function (DUF4377) 142 215 1.2E-20 T 23-10-2018 IPR025485 Domain of unknown function DUF4377 DLM_4119 b40c8816db8eada31ed8e0a9d05127ff 225 Gene3D G3DSA:2.40.128.270 11 121 1.2E-16 T 23-10-2018 IPR038670 HslJ-like superfamily DLM_0828 78c5fd2abf403192d0d942f3a8891032 248 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 238 2.1E-17 T 23-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DLM_0828 78c5fd2abf403192d0d942f3a8891032 248 Gene3D G3DSA:3.60.10.10 2 246 4.4E-41 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DLM_0828 78c5fd2abf403192d0d942f3a8891032 248 SUPERFAMILY SSF56219 3 244 6.94E-46 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DLM_4125 40888dfeb68dd8cdc826b3a93ead45bf 270 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 73 221 1.1E-29 T 23-10-2018 IPR006342 Methyltransferase FkbM DLM_4125 40888dfeb68dd8cdc826b3a93ead45bf 270 SUPERFAMILY SSF53335 27 241 4.11E-50 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4125 40888dfeb68dd8cdc826b3a93ead45bf 270 Pfam PF05050 Methyltransferase FkbM domain 74 239 4.4E-21 T 23-10-2018 IPR006342 Methyltransferase FkbM DLM_4125 40888dfeb68dd8cdc826b3a93ead45bf 270 Gene3D G3DSA:3.40.50.150 63 248 1.2E-36 T 23-10-2018 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 SUPERFAMILY SSF103491 1 342 1.12E-109 T 23-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 Pfam PF00344 SecY translocase 1 335 4.6E-111 T 23-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 351 24.314 T 23-10-2018 IPR026593 Protein translocase subunit SecY DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 ProSitePatterns PS00756 Protein secY signature 2. 91 108 - T 23-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 PRINTS PR00303 Preprotein translocase SecY subunit signature 190 209 1.3E-70 T 23-10-2018 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 PRINTS PR00303 Preprotein translocase SecY subunit signature 37 60 1.3E-70 T 23-10-2018 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 97 1.3E-70 T 23-10-2018 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 PRINTS PR00303 Preprotein translocase SecY subunit signature 98 121 1.3E-70 T 23-10-2018 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 PRINTS PR00303 Preprotein translocase SecY subunit signature 288 306 1.3E-70 T 23-10-2018 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 338 1.3E-70 T 23-10-2018 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 PRINTS PR00303 Preprotein translocase SecY subunit signature 233 255 1.3E-70 T 23-10-2018 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 1 347 3.2E-108 T 23-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DLM_4412 67ab812ad5f5c08c9cbaf6ca523b7cbe 363 Gene3D G3DSA:1.10.3370.10 1 347 3.0E-129 T 23-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DLM_2513 564b51fd27ddfab1710e6f3e5fdeef09 245 Pfam PF04002 RadC-like JAB domain 126 243 5.5E-38 T 23-10-2018 IPR025657 RadC-like JAB domain DLM_2513 564b51fd27ddfab1710e6f3e5fdeef09 245 SUPERFAMILY SSF47781 38 108 6.23E-10 T 23-10-2018 IPR010994 RuvA domain 2-like DLM_2513 564b51fd27ddfab1710e6f3e5fdeef09 245 SUPERFAMILY SSF102712 174 215 3.14E-5 T 23-10-2018 DLM_2513 564b51fd27ddfab1710e6f3e5fdeef09 245 Gene3D G3DSA:1.10.150.20 43 112 9.8E-6 T 23-10-2018 DLM_2513 564b51fd27ddfab1710e6f3e5fdeef09 245 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 194 199 - T 23-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DLM_2513 564b51fd27ddfab1710e6f3e5fdeef09 245 Gene3D G3DSA:3.40.140.10 123 245 5.5E-38 T 23-10-2018 DLM_2513 564b51fd27ddfab1710e6f3e5fdeef09 245 TIGRFAM TIGR00608 radc: DNA repair protein RadC 32 245 2.7E-65 T 23-10-2018 IPR001405 Uncharacterised protein family UPF0758 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 Gene3D G3DSA:3.20.20.220 136 516 2.9E-144 T 23-10-2018 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 SUPERFAMILY SSF81935 10 180 1.57E-64 T 23-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 813 824 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 517 1010 1.6E-241 T 23-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 Pfam PF00171 Aldehyde dehydrogenase family 565 1009 7.7E-116 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 PIRSF PIRSF000197 1 1197 0.0 T 23-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 SUPERFAMILY SSF51730 181 524 1.65E-119 T 23-10-2018 IPR029041 FAD-linked oxidoreductase-like DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 Gene3D G3DSA:3.20.20.220 10 106 8.0E-14 T 23-10-2018 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 SUPERFAMILY SSF53720 563 1010 2.88E-125 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 67 178 5.6E-46 T 23-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 Gene3D G3DSA:3.40.605.10 552 1009 1.2E-146 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 Gene3D G3DSA:3.40.309.10 788 980 1.2E-146 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0599 a749847fe6654f7802fbe5c9d2fde9e2 1198 Pfam PF01619 Proline dehydrogenase 189 481 1.7E-99 T 23-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DLM_3778 01636758ab08f2a23c21611b30cc33e2 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 2.6E-13 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_3778 01636758ab08f2a23c21611b30cc33e2 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 2.6E-13 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_3778 01636758ab08f2a23c21611b30cc33e2 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 2.6E-13 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_3778 01636758ab08f2a23c21611b30cc33e2 109 Gene3D G3DSA:1.10.10.10 5 101 9.1E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3778 01636758ab08f2a23c21611b30cc33e2 109 SUPERFAMILY SSF46785 9 97 2.81E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3778 01636758ab08f2a23c21611b30cc33e2 109 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 1.9E-12 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_3778 01636758ab08f2a23c21611b30cc33e2 109 SMART SM00418 15 93 2.6E-24 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_4287 002c299ada07613e34fcb0eeaeb5630d 163 Pfam PF11158 Protein of unknown function (DUF2938) 10 158 2.2E-61 T 23-10-2018 IPR021329 Protein of unknown function DUF2938 DLM_3077 972bb79e4023f74434b353c264d7bce6 227 Gene3D G3DSA:1.10.3810.10 44 226 2.6E-59 T 23-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_3077 972bb79e4023f74434b353c264d7bce6 227 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 6 225 1.3E-103 T 23-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_3077 972bb79e4023f74434b353c264d7bce6 227 SUPERFAMILY SSF53955 56 222 7.59E-60 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_3077 972bb79e4023f74434b353c264d7bce6 227 Pfam PF00912 Transglycosylase 55 221 1.8E-56 T 23-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_3077 972bb79e4023f74434b353c264d7bce6 227 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 6 227 39.609 T 23-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_1221 944aebecb121a41f4ecb9ac5b03c7917 371 SUPERFAMILY SSF111369 51 276 1.44E-18 T 23-10-2018 DLM_1221 944aebecb121a41f4ecb9ac5b03c7917 371 Gene3D G3DSA:2.40.50.100 60 206 6.5E-62 T 23-10-2018 DLM_1221 944aebecb121a41f4ecb9ac5b03c7917 371 Gene3D G3DSA:2.40.420.20 42 355 6.5E-62 T 23-10-2018 DLM_1221 944aebecb121a41f4ecb9ac5b03c7917 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 357 1.1E-63 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_1221 944aebecb121a41f4ecb9ac5b03c7917 371 Gene3D G3DSA:2.40.30.170 46 280 6.5E-62 T 23-10-2018 DLM_1221 944aebecb121a41f4ecb9ac5b03c7917 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 261 4.5E-15 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_1221 944aebecb121a41f4ecb9ac5b03c7917 371 Gene3D G3DSA:1.10.287.470 94 166 6.5E-62 T 23-10-2018 DLM_1632 f5d8732887870a81495fc17c7740983f 286 Pfam PF13276 HTH-like domain 45 98 8.2E-11 T 23-10-2018 IPR025948 HTH-like domain DLM_1632 f5d8732887870a81495fc17c7740983f 286 SUPERFAMILY SSF53098 107 266 1.19E-38 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1632 f5d8732887870a81495fc17c7740983f 286 Gene3D G3DSA:3.30.420.10 107 254 2.9E-19 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1632 f5d8732887870a81495fc17c7740983f 286 Pfam PF13683 Integrase core domain 197 263 4.1E-30 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 653 761 3.6E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SMART SM00387 652 762 3.0E-30 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 Pfam PF00989 PAS fold 294 404 2.4E-16 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 Gene3D G3DSA:1.10.287.130 545 607 3.9E-19 T 23-10-2018 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 707 8.9E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 722 740 8.9E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 746 759 8.9E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 711 721 8.9E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SUPERFAMILY SSF47384 534 608 1.73E-10 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SUPERFAMILY SSF55785 278 406 1.17E-22 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SMART SM00091 420 484 25.0 T 23-10-2018 IPR000014 PAS domain DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SMART SM00091 292 359 5.4E-9 T 23-10-2018 IPR000014 PAS domain DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SUPERFAMILY SSF55785 405 516 4.36E-7 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 Gene3D G3DSA:3.30.565.10 610 763 6.3E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 293 414 2.7E-21 T 23-10-2018 IPR000014 PAS domain DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SUPERFAMILY SSF55874 596 760 7.86E-38 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 Gene3D G3DSA:3.30.450.20 287 422 5.8E-24 T 23-10-2018 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SMART SM00086 366 408 9.1E-4 T 23-10-2018 IPR001610 PAC motif DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 SMART SM00388 540 610 2.1E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0847 4c88fb28f6baf6e9a99bd6e74f01329a 764 Pfam PF00512 His Kinase A (phospho-acceptor) domain 541 607 1.5E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2906 4219b04da7ebb3c24d66e873f480c555 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.453 T 23-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_2906 4219b04da7ebb3c24d66e873f480c555 77 Gene3D G3DSA:2.30.170.40 2 77 2.3E-32 T 23-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2906 4219b04da7ebb3c24d66e873f480c555 77 Pfam PF00830 Ribosomal L28 family 3 61 1.5E-28 T 23-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2906 4219b04da7ebb3c24d66e873f480c555 77 SUPERFAMILY SSF143800 2 74 4.32E-31 T 23-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2906 4219b04da7ebb3c24d66e873f480c555 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.7E-28 T 23-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1800 f8d550f25b7dc982ccd3cf3afa7c5a24 362 ProSitePatterns PS00534 Ferrochelatase signature. 206 224 - T 23-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DLM_1800 f8d550f25b7dc982ccd3cf3afa7c5a24 362 SUPERFAMILY SSF53800 17 344 3.92E-110 T 23-10-2018 DLM_1800 f8d550f25b7dc982ccd3cf3afa7c5a24 362 Gene3D G3DSA:3.40.50.1400 180 318 3.2E-101 T 23-10-2018 DLM_1800 f8d550f25b7dc982ccd3cf3afa7c5a24 362 Gene3D G3DSA:3.40.50.1400 19 337 3.2E-101 T 23-10-2018 DLM_1800 f8d550f25b7dc982ccd3cf3afa7c5a24 362 TIGRFAM TIGR00109 hemH: ferrochelatase 15 337 2.3E-93 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DLM_1800 f8d550f25b7dc982ccd3cf3afa7c5a24 362 Pfam PF00762 Ferrochelatase 18 336 1.6E-118 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DLM_1800 f8d550f25b7dc982ccd3cf3afa7c5a24 362 Hamap MF_00323 Ferrochelatase [hemH]. 16 337 38.508 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DLM_2251 424ba2f91d184678cf05458980d45796 367 SUPERFAMILY SSF109604 126 249 2.45E-8 T 23-10-2018 DLM_2251 424ba2f91d184678cf05458980d45796 367 Gene3D G3DSA:1.10.3210.10 1 285 1.9E-23 T 23-10-2018 DLM_2251 424ba2f91d184678cf05458980d45796 367 Pfam PF13487 HD domain 183 240 6.2E-8 T 23-10-2018 DLM_2291 0c4c33bd7c0c9c702e5f74453e6c629c 255 Gene3D G3DSA:3.40.50.1820 1 241 3.0E-34 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2291 0c4c33bd7c0c9c702e5f74453e6c629c 255 Pfam PF12697 Alpha/beta hydrolase family 1 232 2.9E-22 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2291 0c4c33bd7c0c9c702e5f74453e6c629c 255 SUPERFAMILY SSF53474 1 240 1.32E-34 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4005 7d1e97ecb23dc3ba18ba863d74206d9b 122 Pfam PF13682 Chemoreceptor zinc-binding domain 10 75 4.5E-9 T 23-10-2018 IPR025991 Chemoreceptor zinc-binding domain DLM_4005 7d1e97ecb23dc3ba18ba863d74206d9b 122 Gene3D G3DSA:1.20.120.30 1 120 4.4E-5 T 23-10-2018 DLM_0734 4553cf8bf9b032b506c95de89af08323 305 SUPERFAMILY SSF53850 91 299 1.69E-37 T 23-10-2018 DLM_0734 4553cf8bf9b032b506c95de89af08323 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0734 4553cf8bf9b032b506c95de89af08323 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0734 4553cf8bf9b032b506c95de89af08323 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0734 4553cf8bf9b032b506c95de89af08323 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0734 4553cf8bf9b032b506c95de89af08323 305 Pfam PF03466 LysR substrate binding domain 90 295 5.5E-41 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0734 4553cf8bf9b032b506c95de89af08323 305 SUPERFAMILY SSF46785 3 113 1.49E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0734 4553cf8bf9b032b506c95de89af08323 305 Gene3D G3DSA:3.40.190.10 93 290 1.1E-44 T 23-10-2018 DLM_0734 4553cf8bf9b032b506c95de89af08323 305 Gene3D G3DSA:1.10.10.10 3 89 9.6E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0734 4553cf8bf9b032b506c95de89af08323 305 Gene3D G3DSA:3.40.190.10 165 270 1.1E-44 T 23-10-2018 DLM_0491 2f1fe823af7c897b8fc1063e513bac02 146 SUPERFAMILY SSF54427 40 142 6.75E-35 T 23-10-2018 IPR032710 NTF2-like domain superfamily DLM_0491 2f1fe823af7c897b8fc1063e513bac02 146 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 16 142 27.481 T 23-10-2018 IPR023006 Uncharacterised protein family UPF0225 DLM_0491 2f1fe823af7c897b8fc1063e513bac02 146 Gene3D G3DSA:3.10.450.50 18 144 4.5E-39 T 23-10-2018 DLM_2863 8cf136ff7ab8c09ed17c02a7c73ef3e9 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 184 2.6E-41 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 DLM_2863 8cf136ff7ab8c09ed17c02a7c73ef3e9 192 Gene3D G3DSA:3.90.950.10 1 192 1.3E-51 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DLM_2863 8cf136ff7ab8c09ed17c02a7c73ef3e9 192 Pfam PF02545 Maf-like protein 2 185 2.8E-37 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 DLM_2863 8cf136ff7ab8c09ed17c02a7c73ef3e9 192 PIRSF PIRSF006305 1 192 7.9E-37 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 DLM_2863 8cf136ff7ab8c09ed17c02a7c73ef3e9 192 SUPERFAMILY SSF52972 1 185 3.99E-50 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DLM_2863 8cf136ff7ab8c09ed17c02a7c73ef3e9 192 Hamap MF_00528 Septum formation protein Maf [maf]. 2 191 27.361 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 TIGRFAM TIGR00746 arcC: carbamate kinase 1 305 1.6E-127 T 23-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 Pfam PF00696 Amino acid kinase family 1 286 3.0E-26 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 Gene3D G3DSA:3.40.1160.10 1 306 7.4E-114 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 157 176 7.5E-69 T 23-10-2018 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 7.5E-69 T 23-10-2018 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 77 95 7.5E-69 T 23-10-2018 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 109 128 7.5E-69 T 23-10-2018 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 180 198 7.5E-69 T 23-10-2018 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 210 225 7.5E-69 T 23-10-2018 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 261 276 7.5E-69 T 23-10-2018 DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 SUPERFAMILY SSF53633 1 304 2.49E-79 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_2878 e9dd31ddbe0982473eae0f038dae2f6e 314 PIRSF PIRSF000723 1 306 4.1E-112 T 23-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 TIGRFAM TIGR00746 arcC: carbamate kinase 1 305 1.6E-127 T 23-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 Pfam PF00696 Amino acid kinase family 1 286 3.0E-26 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 Gene3D G3DSA:3.40.1160.10 1 306 7.4E-114 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 157 176 7.5E-69 T 23-10-2018 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 7.5E-69 T 23-10-2018 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 77 95 7.5E-69 T 23-10-2018 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 109 128 7.5E-69 T 23-10-2018 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 180 198 7.5E-69 T 23-10-2018 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 210 225 7.5E-69 T 23-10-2018 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 PRINTS PR01469 Bacterial carbamate kinase signature 261 276 7.5E-69 T 23-10-2018 DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 SUPERFAMILY SSF53633 1 304 2.49E-79 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_0121 e9dd31ddbe0982473eae0f038dae2f6e 314 PIRSF PIRSF000723 1 306 4.1E-112 T 23-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 DLM_3702 777df52f0316312e4e7212a56bf6dfc5 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 61 22.015 T 23-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DLM_3702 777df52f0316312e4e7212a56bf6dfc5 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.9E-22 T 23-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DLM_3702 777df52f0316312e4e7212a56bf6dfc5 67 Pfam PF02416 mttA/Hcf106 family 5 54 1.2E-15 T 23-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DLM_1453 16e3ec61e63ba2fa8f694c7c4d2d3d30 377 SUPERFAMILY SSF109604 131 294 3.0E-14 T 23-10-2018 DLM_1453 16e3ec61e63ba2fa8f694c7c4d2d3d30 377 Pfam PF13487 HD domain 187 250 8.2E-10 T 23-10-2018 DLM_1453 16e3ec61e63ba2fa8f694c7c4d2d3d30 377 Gene3D G3DSA:1.10.3210.10 9 296 2.7E-31 T 23-10-2018 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 1 272 8.9E-96 T 23-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 SUPERFAMILY SSF56553 11 134 9.94E-42 T 23-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 Gene3D G3DSA:2.170.120.12 11 133 5.9E-70 T 23-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 SUPERFAMILY SSF47789 207 280 8.37E-27 T 23-10-2018 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 SUPERFAMILY SSF55257 1 190 5.81E-19 T 23-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 212 282 6.0E-35 T 23-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 1 184 6.0E-15 T 23-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 273 28.709 T 23-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 SMART SM00662 1 190 4.2E-75 T 23-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 22 112 2.4E-24 T 23-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 Gene3D G3DSA:3.30.1360.10 1 183 5.9E-70 T 23-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 Gene3D G3DSA:1.10.150.20 201 284 5.6E-37 T 23-10-2018 DLM_4417 ea7089d0fa64e4c23824e6bd3a90adea 285 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 206 264 1.2E-24 T 23-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_0560 d27a3d08dfad52a66596c720eab296c1 648 Gene3D G3DSA:3.40.1190.20 19 323 6.8E-90 T 23-10-2018 IPR029056 Ribokinase-like DLM_0560 d27a3d08dfad52a66596c720eab296c1 648 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 285 298 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_0560 d27a3d08dfad52a66596c720eab296c1 648 Pfam PF00294 pfkB family carbohydrate kinase 18 333 1.3E-45 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB DLM_0560 d27a3d08dfad52a66596c720eab296c1 648 Gene3D G3DSA:2.20.150.10 24 119 6.8E-90 T 23-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 DLM_0560 d27a3d08dfad52a66596c720eab296c1 648 SUPERFAMILY SSF53613 16 340 9.35E-65 T 23-10-2018 IPR029056 Ribokinase-like DLM_0560 d27a3d08dfad52a66596c720eab296c1 648 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 16 341 3.1E-120 T 23-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 DLM_0560 d27a3d08dfad52a66596c720eab296c1 648 Gene3D G3DSA:3.20.20.70 352 647 1.1E-43 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0560 d27a3d08dfad52a66596c720eab296c1 648 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 336 645 3.6E-134 T 23-10-2018 IPR018659 Protein of unknown function DUF2090 DLM_0654 440c22a7076e06012e4fe0410b030fe0 277 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 275 1.6E-98 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DLM_0654 440c22a7076e06012e4fe0410b030fe0 277 Hamap MF_00158 Pantothenate synthetase [panC]. 2 275 39.202 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DLM_0654 440c22a7076e06012e4fe0410b030fe0 277 Pfam PF02569 Pantoate-beta-alanine ligase 3 273 6.8E-103 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DLM_0654 440c22a7076e06012e4fe0410b030fe0 277 Gene3D G3DSA:3.40.50.620 2 174 1.2E-76 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0654 440c22a7076e06012e4fe0410b030fe0 277 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 22 64 1.5E-7 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DLM_0654 440c22a7076e06012e4fe0410b030fe0 277 Gene3D G3DSA:3.30.1300.10 175 273 5.7E-31 T 23-10-2018 DLM_0654 440c22a7076e06012e4fe0410b030fe0 277 SUPERFAMILY SSF52374 2 275 2.12E-101 T 23-10-2018 DLM_3584 b31d32e844ad395770fefce9a37a5e5a 330 SUPERFAMILY SSF53822 30 326 5.07E-57 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_3584 b31d32e844ad395770fefce9a37a5e5a 330 Gene3D G3DSA:3.40.50.2300 136 320 2.0E-117 T 23-10-2018 DLM_3584 b31d32e844ad395770fefce9a37a5e5a 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 31 303 2.0E-42 T 23-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DLM_3584 b31d32e844ad395770fefce9a37a5e5a 330 Gene3D G3DSA:3.40.50.2300 31 312 2.0E-117 T 23-10-2018 DLM_3584 b31d32e844ad395770fefce9a37a5e5a 330 PIRSF PIRSF002816 4 330 4.9E-133 T 23-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 DLM_0445 2c3c22d740b4524a525b17632de74513 782 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 203 779 8.8E-177 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 38 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DLM_0445 2c3c22d740b4524a525b17632de74513 782 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 222 778 3.6E-185 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 SUPERFAMILY SSF81665 252 753 6.67E-17 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 Gene3D G3DSA:3.30.70.100 73 142 8.6E-15 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 Gene3D G3DSA:3.30.70.100 4 72 3.7E-17 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 Gene3D G3DSA:3.40.50.1000 466 728 3.2E-87 T 23-10-2018 IPR023214 HAD superfamily DLM_0445 2c3c22d740b4524a525b17632de74513 782 Pfam PF00403 Heavy-metal-associated domain 75 133 2.8E-9 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DLM_0445 2c3c22d740b4524a525b17632de74513 782 Pfam PF00403 Heavy-metal-associated domain 7 66 1.0E-12 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DLM_0445 2c3c22d740b4524a525b17632de74513 782 SUPERFAMILY SSF81653 288 385 4.45E-28 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 Pfam PF00702 haloacid dehalogenase-like hydrolase 481 690 1.9E-44 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 SUPERFAMILY SSF56784 483 776 1.53E-59 T 23-10-2018 IPR036412 HAD-like superfamily DLM_0445 2c3c22d740b4524a525b17632de74513 782 SUPERFAMILY SSF55008 5 68 3.8E-16 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DLM_0445 2c3c22d740b4524a525b17632de74513 782 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 258 758 2.2E-94 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 105 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 699 711 8.5E-29 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 633 8.5E-29 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 8.5E-29 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 676 695 8.5E-29 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 499 8.5E-29 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 601 612 8.5E-29 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 487 493 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 SUPERFAMILY SSF55008 71 139 1.57E-15 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DLM_0445 2c3c22d740b4524a525b17632de74513 782 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 68 2.3E-10 T 23-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 Gene3D G3DSA:2.70.150.20 279 389 3.0E-38 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 528 546 7.6E-10 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 707 732 7.6E-10 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 676 692 7.6E-10 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_0445 2c3c22d740b4524a525b17632de74513 782 Pfam PF00122 E1-E2 ATPase 286 463 6.2E-58 T 23-10-2018 DLM_0445 2c3c22d740b4524a525b17632de74513 782 Gene3D G3DSA:3.40.1110.10 496 608 3.2E-87 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DLM_1331 276698846d8ba35eecbc01f5dca33341 511 Pfam PF07690 Major Facilitator Superfamily 29 426 1.2E-20 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1331 276698846d8ba35eecbc01f5dca33341 511 SUPERFAMILY SSF103473 27 496 4.05E-30 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2219 bcce535457f5a714dfd9956ea8a6a0b9 523 Pfam PF02570 Precorrin-8X methylmutase 312 506 3.6E-62 T 23-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 DLM_2219 bcce535457f5a714dfd9956ea8a6a0b9 523 SUPERFAMILY SSF63965 307 507 1.83E-62 T 23-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 DLM_2219 bcce535457f5a714dfd9956ea8a6a0b9 523 Gene3D G3DSA:3.40.50.1400 2 128 6.6E-25 T 23-10-2018 DLM_2219 bcce535457f5a714dfd9956ea8a6a0b9 523 Gene3D G3DSA:3.40.50.1400 134 255 1.2E-20 T 23-10-2018 DLM_2219 bcce535457f5a714dfd9956ea8a6a0b9 523 SUPERFAMILY SSF53800 6 253 1.85E-50 T 23-10-2018 DLM_2219 bcce535457f5a714dfd9956ea8a6a0b9 523 Pfam PF01903 CbiX 143 246 2.6E-22 T 23-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DLM_2219 bcce535457f5a714dfd9956ea8a6a0b9 523 Pfam PF01903 CbiX 13 116 2.1E-21 T 23-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DLM_2219 bcce535457f5a714dfd9956ea8a6a0b9 523 Gene3D G3DSA:3.40.50.10230 307 518 6.0E-64 T 23-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 DLM_3917 327d7dd7fed0f9845c9a627805fbc280 257 Gene3D G3DSA:3.40.50.1820 2 255 7.2E-37 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3917 327d7dd7fed0f9845c9a627805fbc280 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 3.7E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_3917 327d7dd7fed0f9845c9a627805fbc280 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 3.7E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_3917 327d7dd7fed0f9845c9a627805fbc280 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 3.7E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_3917 327d7dd7fed0f9845c9a627805fbc280 257 Pfam PF12697 Alpha/beta hydrolase family 23 245 1.1E-17 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_3917 327d7dd7fed0f9845c9a627805fbc280 257 SUPERFAMILY SSF53474 3 253 6.41E-38 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 44 57 - T 23-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 SUPERFAMILY SSF53686 8 357 3.93E-105 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 6 504 1.4E-256 T 23-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 Gene3D G3DSA:3.40.1020.10 330 505 3.4E-77 T 23-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 321 410 2.4E-27 T 23-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 421 504 3.1E-25 T 23-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 Gene3D G3DSA:3.40.50.1100 16 319 7.9E-141 T 23-10-2018 DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 Gene3D G3DSA:3.40.50.1100 52 148 7.9E-141 T 23-10-2018 DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 308 1.8E-81 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DLM_1731 76b99c03a5aa0117872e003c9ea35e29 509 SUPERFAMILY SSF55021 411 504 1.33E-28 T 23-10-2018 DLM_0019 c7689c0837c1c18087e884b3611fc5bc 238 Gene3D G3DSA:3.30.230.70 10 237 4.2E-66 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_0019 c7689c0837c1c18087e884b3611fc5bc 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 4.6E-13 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_0019 c7689c0837c1c18087e884b3611fc5bc 238 Pfam PF01138 3' exoribonuclease family, domain 1 11 140 2.7E-24 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_0019 c7689c0837c1c18087e884b3611fc5bc 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.228 T 23-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DLM_0019 c7689c0837c1c18087e884b3611fc5bc 238 SUPERFAMILY SSF54211 1 181 3.59E-45 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_0019 c7689c0837c1c18087e884b3611fc5bc 238 SUPERFAMILY SSF55666 153 236 1.44E-27 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_0019 c7689c0837c1c18087e884b3611fc5bc 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 23-10-2018 IPR018336 Ribonuclease PH, conserved site DLM_0019 c7689c0837c1c18087e884b3611fc5bc 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.3E-120 T 23-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 Pfam PF07687 Peptidase dimerisation domain 170 278 4.8E-23 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 SUPERFAMILY SSF53187 4 383 5.43E-58 T 23-10-2018 DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 SUPERFAMILY SSF55031 176 278 2.84E-21 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 136 - T 23-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 7 378 3.9E-118 T 23-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 Gene3D G3DSA:3.30.70.360 173 290 2.4E-102 T 23-10-2018 DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 Pfam PF01546 Peptidase family M20/M25/M40 65 380 3.7E-34 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 Gene3D G3DSA:3.40.630.10 10 368 2.4E-102 T 23-10-2018 DLM_1653 9426654a414c6513e43a9e476ebb5a85 385 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 64 73 - T 23-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Gene3D G3DSA:3.30.70.1440 679 876 0.0 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Gene3D G3DSA:3.30.70.1320 135 335 0.0 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 SUPERFAMILY SSF82866 299 499 3.27E-51 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 SUPERFAMILY SSF82693 682 867 2.28E-27 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Gene3D G3DSA:1.20.1640.10 523 1033 0.0 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 SUPERFAMILY SSF82693 138 333 7.85E-25 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1041 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 SUPERFAMILY SSF82714 732 818 3.92E-22 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.8E-94 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Gene3D G3DSA:1.20.1640.10 10 522 0.0 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Gene3D G3DSA:3.30.70.1430 40 827 0.0 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 SUPERFAMILY SSF82714 185 274 4.71E-19 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 SUPERFAMILY SSF82693 41 134 6.8E-26 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Pfam PF00873 AcrB/AcrD/AcrF family 4 1036 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 SUPERFAMILY SSF82693 575 681 4.19E-28 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Gene3D G3DSA:3.30.2090.10 731 819 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 Gene3D G3DSA:3.30.70.1430 577 678 0.0 T 23-10-2018 DLM_0510 19a8a89e167c44784c6766d0fc4b8cc0 1080 SUPERFAMILY SSF82866 841 1038 9.68E-45 T 23-10-2018 DLM_0078 3aab2408f344f9cbad343b79d6b6bd1c 119 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 20 80 2.1E-23 T 23-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DLM_0078 3aab2408f344f9cbad343b79d6b6bd1c 119 SUPERFAMILY SSF47781 21 83 1.56E-31 T 23-10-2018 IPR010994 RuvA domain 2-like DLM_0078 3aab2408f344f9cbad343b79d6b6bd1c 119 SMART SM00278 60 79 0.67 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_0078 3aab2408f344f9cbad343b79d6b6bd1c 119 SMART SM00278 30 49 0.28 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_0078 3aab2408f344f9cbad343b79d6b6bd1c 119 Gene3D G3DSA:1.10.150.280 15 86 3.2E-26 T 23-10-2018 DLM_0078 3aab2408f344f9cbad343b79d6b6bd1c 119 Pfam PF12836 Helix-hairpin-helix motif 21 80 1.5E-24 T 23-10-2018 DLM_0056 4f650f79b9cfd9dc61a8f8c3afd71fa3 348 Pfam PF00146 NADH dehydrogenase 21 335 2.4E-128 T 23-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0056 4f650f79b9cfd9dc61a8f8c3afd71fa3 348 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 60 75 - T 23-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0056 4f650f79b9cfd9dc61a8f8c3afd71fa3 348 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 14 343 25.472 T 23-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0056 4f650f79b9cfd9dc61a8f8c3afd71fa3 348 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 223 236 - T 23-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3801 ace932ab245fb2d7871edf82ce8afa31 206 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 191 7.0E-39 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DLM_3801 ace932ab245fb2d7871edf82ce8afa31 206 PIRSF PIRSF006806 6 193 4.8E-34 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DLM_3801 ace932ab245fb2d7871edf82ce8afa31 206 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 191 9.7E-33 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DLM_3801 ace932ab245fb2d7871edf82ce8afa31 206 SUPERFAMILY SSF100950 10 199 2.65E-43 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_3801 ace932ab245fb2d7871edf82ce8afa31 206 Gene3D G3DSA:3.40.50.10420 10 205 5.5E-45 T 23-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 27 1338 0.0 T 23-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Gene3D G3DSA:3.90.650.10 833 1030 8.9E-28 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Gene3D G3DSA:3.90.650.10 447 632 3.9E-52 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Pfam PF02769 AIR synthase related protein, C-terminal domain 458 616 4.2E-27 T 23-10-2018 IPR010918 PurM-like, C-terminal domain DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Pfam PF02769 AIR synthase related protein, C-terminal domain 863 1014 2.6E-9 T 23-10-2018 IPR010918 PurM-like, C-terminal domain DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Gene3D G3DSA:3.40.50.880 1031 1339 8.9E-135 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 SUPERFAMILY SSF56042 456 681 1.5E-50 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 SUPERFAMILY SSF109736 179 244 1.2E-21 T 23-10-2018 DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1088 1338 2.0E-104 T 23-10-2018 DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 SUPERFAMILY SSF55326 644 841 5.76E-63 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 SUPERFAMILY SSF56042 848 1075 3.74E-45 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 SUPERFAMILY SSF55326 245 454 7.67E-62 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 SMART SM01211 1088 1338 8.4E-154 T 23-10-2018 DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Gene3D G3DSA:1.10.8.750 177 237 5.1E-28 T 23-10-2018 DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Gene3D G3DSA:3.30.1330.10 238 446 3.1E-40 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 24 1339 20.967 T 23-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 Gene3D G3DSA:3.30.1330.10 653 832 3.1E-22 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 SUPERFAMILY SSF52317 1084 1338 3.49E-94 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1877 70b8e4d4020c5d80a37ed58cee83fb59 1339 SUPERFAMILY SSF82697 24 175 1.2E-44 T 23-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 SUPERFAMILY SSF51126 344 495 8.47E-9 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 SMART SM00869 1182 1443 9.4E-14 T 23-10-2018 IPR005546 Autotransporter beta-domain DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 SUPERFAMILY SSF51126 603 773 3.77E-10 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 SUPERFAMILY SSF51126 774 1015 4.71E-13 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 SUPERFAMILY SSF103515 1141 1453 8.63E-32 T 23-10-2018 IPR036709 Autotransporter beta-domain superfamily DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 SUPERFAMILY SSF51126 492 605 7.53E-6 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 517 537 4.1E-5 T 23-10-2018 IPR013425 Autotransporter-associated beta strand repeat DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 407 427 1.6E-5 T 23-10-2018 IPR013425 Autotransporter-associated beta strand repeat DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 712 737 2.1E-8 T 23-10-2018 IPR013425 Autotransporter-associated beta strand repeat DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 795 826 5.9E-9 T 23-10-2018 IPR013425 Autotransporter-associated beta strand repeat DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 Pfam PF12951 Passenger-associated-transport-repeat 797 826 2.7E-5 T 23-10-2018 IPR013425 Autotransporter-associated beta strand repeat DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 Pfam PF12951 Passenger-associated-transport-repeat 311 335 0.093 T 23-10-2018 IPR013425 Autotransporter-associated beta strand repeat DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 Pfam PF12951 Passenger-associated-transport-repeat 886 914 1.4E-4 T 23-10-2018 IPR013425 Autotransporter-associated beta strand repeat DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 Pfam PF12951 Passenger-associated-transport-repeat 712 736 1.3E-7 T 23-10-2018 IPR013425 Autotransporter-associated beta strand repeat DLM_1324 ef19a4763488e5ef8cb6d15fee0c4792 1453 Gene3D G3DSA:2.40.128.130 1151 1453 1.9E-32 T 23-10-2018 IPR036709 Autotransporter beta-domain superfamily DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 SMART SM00448 7 123 8.6E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 Gene3D G3DSA:3.40.50.2300 5 133 5.5E-24 T 23-10-2018 DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 Pfam PF13181 Tetratricopeptide repeat 234 265 2.2E-4 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 SMART SM00028 233 266 0.83 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 SMART SM00028 267 300 47.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 Pfam PF00072 Response regulator receiver domain 9 123 8.2E-19 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 SUPERFAMILY SSF48452 171 369 7.3E-15 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 Gene3D G3DSA:1.25.40.10 207 384 6.6E-15 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 SUPERFAMILY SSF52172 6 139 6.12E-28 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4020 a88ac180f92eef9b255a2b89a41cc3f4 541 Gene3D G3DSA:1.25.40.10 134 206 5.4E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3570 c853762aa32a7af2eec212aa9d62a9d7 484 Pfam PF12801 4Fe-4S binding domain 88 126 3.4E-10 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_3570 c853762aa32a7af2eec212aa9d62a9d7 484 Pfam PF12801 4Fe-4S binding domain 173 205 2.9E-5 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_3570 c853762aa32a7af2eec212aa9d62a9d7 484 SUPERFAMILY SSF54862 94 255 6.58E-6 T 23-10-2018 DLM_4561 1f7585b566c72204b34fba3edd2a1462 226 Gene3D G3DSA:3.40.50.150 1 151 3.0E-16 T 23-10-2018 DLM_4561 1f7585b566c72204b34fba3edd2a1462 226 SUPERFAMILY SSF53335 2 157 2.23E-21 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4561 1f7585b566c72204b34fba3edd2a1462 226 Pfam PF05050 Methyltransferase FkbM domain 10 139 1.8E-10 T 23-10-2018 IPR006342 Methyltransferase FkbM DLM_4561 1f7585b566c72204b34fba3edd2a1462 226 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 4 123 2.1E-17 T 23-10-2018 IPR006342 Methyltransferase FkbM DLM_0831 69151fb69ceaa0ca551e319c39f5d4ad 269 SUPERFAMILY SSF53850 31 266 2.95E-68 T 23-10-2018 DLM_0831 69151fb69ceaa0ca551e319c39f5d4ad 269 Pfam PF03180 NLPA lipoprotein 32 265 4.4E-79 T 23-10-2018 IPR004872 Lipoprotein NlpA family DLM_0831 69151fb69ceaa0ca551e319c39f5d4ad 269 PIRSF PIRSF002854 1 267 1.7E-77 T 23-10-2018 IPR004872 Lipoprotein NlpA family DLM_0831 69151fb69ceaa0ca551e319c39f5d4ad 269 Gene3D G3DSA:3.40.190.10 111 219 1.7E-84 T 23-10-2018 DLM_0831 69151fb69ceaa0ca551e319c39f5d4ad 269 Gene3D G3DSA:3.40.190.10 46 261 1.7E-84 T 23-10-2018 DLM_4497 d4a758507facf8e6adcbca0409cef608 295 Gene3D G3DSA:3.40.50.150 92 294 2.0E-68 T 23-10-2018 DLM_4497 d4a758507facf8e6adcbca0409cef608 295 Pfam PF04445 Putative SAM-dependent methyltransferase 62 284 9.5E-83 T 23-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DLM_4497 d4a758507facf8e6adcbca0409cef608 295 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 37 286 37.339 T 23-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DLM_4497 d4a758507facf8e6adcbca0409cef608 295 SUPERFAMILY SSF53335 37 286 1.51E-63 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Gene3D G3DSA:3.30.300.30 862 972 2.2E-32 T 23-10-2018 DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 SUPERFAMILY SSF52777 192 434 4.11E-32 T 23-10-2018 DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Pfam PF00668 Condensation domain 41 359 3.0E-29 T 23-10-2018 IPR001242 Condensation domain DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 ProSitePatterns PS00455 Putative AMP-binding domain signature. 611 622 - T 23-10-2018 IPR020845 AMP-binding, conserved site DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Pfam PF13193 AMP-binding enzyme C-terminal domain 876 958 1.1E-10 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Gene3D G3DSA:3.40.50.12780 463 860 5.0E-115 T 23-10-2018 DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Gene3D G3DSA:3.30.559.30 190 440 5.4E-61 T 23-10-2018 DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 492 891 2.3E-121 T 23-10-2018 IPR010071 Amino acid adenylation domain DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Gene3D G3DSA:3.30.559.10 2 183 1.6E-41 T 23-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Pfam PF00550 Phosphopantetheine attachment site 987 1028 5.7E-6 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 SUPERFAMILY SSF52777 7 201 2.11E-18 T 23-10-2018 DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 SUPERFAMILY SSF47336 982 1028 2.88E-6 T 23-10-2018 IPR036736 ACP-like superfamily DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Pfam PF00501 AMP-binding enzyme 473 867 1.8E-86 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 PRINTS PR00154 AMP-binding signature 618 626 5.6E-5 T 23-10-2018 IPR020459 AMP-binding DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 PRINTS PR00154 AMP-binding signature 606 617 5.6E-5 T 23-10-2018 IPR020459 AMP-binding DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 Gene3D G3DSA:1.10.1200.10 973 1035 9.0E-12 T 23-10-2018 IPR036736 ACP-like superfamily DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 SUPERFAMILY SSF56801 454 996 3.01E-135 T 23-10-2018 DLM_4293 d7ec1a9eb857afda7a9587eebb6ccce0 1036 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1009 1024 - T 23-10-2018 IPR006162 Phosphopantetheine attachment site DLM_3595 484d0e2be2c203bfecc9635ea91807ea 302 Gene3D G3DSA:3.40.50.2300 113 250 2.5E-45 T 23-10-2018 DLM_3595 484d0e2be2c203bfecc9635ea91807ea 302 Gene3D G3DSA:3.40.50.2300 15 276 2.5E-45 T 23-10-2018 DLM_3595 484d0e2be2c203bfecc9635ea91807ea 302 SUPERFAMILY SSF53822 5 283 4.42E-45 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_3595 484d0e2be2c203bfecc9635ea91807ea 302 Pfam PF13407 Periplasmic binding protein domain 15 270 5.3E-34 T 23-10-2018 IPR025997 Periplasmic binding protein DLM_1803 6cdd3f8f68e879fab15dea13c2a68fd4 355 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 129 1.4E-9 T 23-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DLM_1803 6cdd3f8f68e879fab15dea13c2a68fd4 355 Pfam PF03786 D-mannonate dehydratase (UxuA) 185 330 3.3E-38 T 23-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DLM_1803 6cdd3f8f68e879fab15dea13c2a68fd4 355 SUPERFAMILY SSF51658 1 351 1.93E-40 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_1803 6cdd3f8f68e879fab15dea13c2a68fd4 355 Gene3D G3DSA:3.20.20.150 53 354 1.1E-81 T 23-10-2018 DLM_3734 2bab4419795b1d51015b513aaf431ace 188 Gene3D G3DSA:1.10.10.10 104 185 9.5E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3734 2bab4419795b1d51015b513aaf431ace 188 SUPERFAMILY SSF88946 8 92 9.42E-6 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DLM_3734 2bab4419795b1d51015b513aaf431ace 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 177 3.8E-18 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DLM_3734 2bab4419795b1d51015b513aaf431ace 188 Pfam PF08281 Sigma-70, region 4 125 173 1.5E-16 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_3734 2bab4419795b1d51015b513aaf431ace 188 SUPERFAMILY SSF88659 119 182 3.05E-16 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 168 1.9E-9 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 Pfam PF00672 HAMP domain 207 257 4.0E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 SMART SM00283 276 537 4.7E-59 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 Gene3D G3DSA:1.10.287.950 206 538 6.4E-68 T 23-10-2018 DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 3.6E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 374 401 3.6E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 3.6E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 SMART SM00304 207 261 1.0E-8 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 SUPERFAMILY SSF58104 228 537 2.22E-67 T 23-10-2018 DLM_1358 36eedd27c51c9b7df2b6a2f3380a416f 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 504 3.5E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2338 31a652a0cfb121d02d42663b0d8c521e 154 Gene3D G3DSA:3.30.1460.40 1 135 1.6E-44 T 23-10-2018 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily DLM_2338 31a652a0cfb121d02d42663b0d8c521e 154 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 10 139 1.0E-15 T 23-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE DLM_2338 31a652a0cfb121d02d42663b0d8c521e 154 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 8 150 9.1E-47 T 23-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE DLM_2338 31a652a0cfb121d02d42663b0d8c521e 154 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 11 150 6.1E-42 T 23-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE DLM_3654 4a34d9526bd7d2c6aa92f2f4cc1b5951 936 Gene3D G3DSA:3.30.830.10 37 260 2.2E-53 T 23-10-2018 DLM_3654 4a34d9526bd7d2c6aa92f2f4cc1b5951 936 Pfam PF05193 Peptidase M16 inactive domain 216 300 9.6E-9 T 23-10-2018 IPR007863 Peptidase M16, C-terminal DLM_3654 4a34d9526bd7d2c6aa92f2f4cc1b5951 936 SUPERFAMILY SSF63411 783 925 1.08E-7 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DLM_3654 4a34d9526bd7d2c6aa92f2f4cc1b5951 936 SUPERFAMILY SSF63411 38 259 7.52E-38 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DLM_3654 4a34d9526bd7d2c6aa92f2f4cc1b5951 936 SUPERFAMILY SSF63411 530 735 3.86E-5 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DLM_3654 4a34d9526bd7d2c6aa92f2f4cc1b5951 936 Gene3D G3DSA:3.30.830.10 771 930 1.5E-8 T 23-10-2018 DLM_3654 4a34d9526bd7d2c6aa92f2f4cc1b5951 936 Pfam PF00675 Insulinase (Peptidase family M16) 56 178 4.5E-17 T 23-10-2018 IPR011765 Peptidase M16, N-terminal DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Gene3D G3DSA:3.30.2060.10 126 211 2.7E-107 T 23-10-2018 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SUPERFAMILY SSF52540 773 978 9.72E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SUPERFAMILY SSF52540 8 337 3.99E-93 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Gene3D G3DSA:3.40.50.300 532 771 9.3E-230 T 23-10-2018 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SUPERFAMILY SSF52540 513 773 1.15E-60 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Gene3D G3DSA:3.90.1150.50 992 1133 1.1E-40 T 23-10-2018 IPR037235 TRCF-like, C-terminal domain DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SUPERFAMILY SSF52540 343 455 7.36E-27 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SMART SM00982 996 1096 3.5E-49 T 23-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 144 1069 0.0 T 23-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Gene3D G3DSA:3.40.50.11140 347 443 9.0E-19 T 23-10-2018 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SUPERFAMILY SSF143517 982 1132 1.57E-38 T 23-10-2018 IPR037235 TRCF-like, C-terminal domain DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Gene3D G3DSA:2.30.30.840 473 531 9.3E-230 T 23-10-2018 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Pfam PF00270 DEAD/DEAH box helicase 598 755 4.4E-18 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Pfam PF02559 CarD-like/TRCF domain 471 565 6.9E-26 T 23-10-2018 IPR003711 CarD-like/TRCF domain DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Pfam PF03461 TRCF domain 998 1090 7.2E-27 T 23-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 26 1097 27.102 T 23-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SMART SM00487 590 780 7.7E-31 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SMART SM01058 469 566 5.2E-47 T 23-10-2018 IPR003711 CarD-like/TRCF domain DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SMART SM00490 816 900 2.0E-16 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Gene3D G3DSA:3.40.50.300 468 978 9.3E-230 T 23-10-2018 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Gene3D G3DSA:3.40.50.11180 25 329 2.7E-107 T 23-10-2018 DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 SUPERFAMILY SSF141259 460 538 3.4E-22 T 23-10-2018 IPR036101 CarD-like/TRCF domain superfamily DLM_3133 f8d960805ed489a5ce628259440fa3fc 1133 Pfam PF00271 Helicase conserved C-terminal domain 795 899 6.0E-16 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1391 3a4023da7c650637b0761e002f9950fc 524 Gene3D G3DSA:3.90.76.10 41 206 2.0E-95 T 23-10-2018 DLM_1391 3a4023da7c650637b0761e002f9950fc 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 440 8.1E-66 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain DLM_1391 3a4023da7c650637b0761e002f9950fc 524 Gene3D G3DSA:3.40.190.10 207 509 2.0E-95 T 23-10-2018 DLM_1391 3a4023da7c650637b0761e002f9950fc 524 PIRSF PIRSF002741 11 521 2.3E-58 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DLM_1391 3a4023da7c650637b0761e002f9950fc 524 SUPERFAMILY SSF53850 24 520 3.26E-98 T 23-10-2018 DLM_1391 3a4023da7c650637b0761e002f9950fc 524 Gene3D G3DSA:3.10.105.10 286 500 2.0E-95 T 23-10-2018 DLM_3708 19b8024442201ab43fdf9d4ec10b27db 214 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 209 2.9E-62 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DLM_3708 19b8024442201ab43fdf9d4ec10b27db 214 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 210 35.059 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DLM_3708 19b8024442201ab43fdf9d4ec10b27db 214 SUPERFAMILY SSF52317 3 210 4.88E-52 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_3708 19b8024442201ab43fdf9d4ec10b27db 214 Gene3D G3DSA:3.40.50.880 1 213 8.2E-72 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_3708 19b8024442201ab43fdf9d4ec10b27db 214 PIRSF PIRSF000495 2 212 2.3E-68 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DLM_3708 19b8024442201ab43fdf9d4ec10b27db 214 Pfam PF00117 Glutamine amidotransferase class-I 6 208 1.6E-16 T 23-10-2018 IPR017926 Glutamine amidotransferase DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 SMART SM00116 315 365 3.1 T 23-10-2018 IPR000644 CBS domain DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 SMART SM00116 378 426 1.6 T 23-10-2018 IPR000644 CBS domain DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 SUPERFAMILY SSF56176 441 526 6.0E-17 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 Gene3D G3DSA:3.10.580.10 287 437 9.1E-38 T 23-10-2018 DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 Pfam PF00571 CBS domain 377 426 1.8E-7 T 23-10-2018 IPR000644 CBS domain DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 Pfam PF00571 CBS domain 313 365 0.0067 T 23-10-2018 IPR000644 CBS domain DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 Pfam PF03471 Transporter associated domain 445 520 4.5E-17 T 23-10-2018 IPR005170 Transporter-associated domain DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 Gene3D G3DSA:3.30.465.10 438 519 1.7E-17 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 SUPERFAMILY SSF54631 295 437 1.71E-23 T 23-10-2018 DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 Pfam PF03741 Integral membrane protein TerC family 16 206 6.6E-49 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DLM_4156 d9d1389f18ca32808b6427a55234a1be 528 SMART SM01091 442 521 8.1E-20 T 23-10-2018 IPR005170 Transporter-associated domain DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 Gene3D G3DSA:1.20.1480.50 274 368 1.5E-5 T 23-10-2018 DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 SUPERFAMILY SSF103190 104 179 6.28E-5 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 SUPERFAMILY SSF158472 313 362 5.89E-7 T 23-10-2018 DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 Gene3D G3DSA:3.30.450.20 38 181 1.4E-21 T 23-10-2018 DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 Pfam PF02743 Cache domain 45 274 3.2E-21 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 SUPERFAMILY SSF55073 376 531 7.06E-48 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 367 527 2.7E-42 T 23-10-2018 IPR000160 GGDEF domain DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 Pfam PF00990 Diguanylate cyclase, GGDEF domain 371 527 2.8E-49 T 23-10-2018 IPR000160 GGDEF domain DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 Gene3D G3DSA:3.30.70.270 369 532 1.1E-55 T 23-10-2018 DLM_0994 a58014e9c5c7bc92f00ed95b8fb88480 533 SMART SM00267 360 533 4.6E-57 T 23-10-2018 IPR000160 GGDEF domain DLM_3070 769abae712fbe4818e419f94b6bf911d 388 Gene3D G3DSA:3.30.310.170 261 388 5.3E-12 T 23-10-2018 DLM_3070 769abae712fbe4818e419f94b6bf911d 388 Pfam PF06804 NlpB/DapX lipoprotein 39 384 1.5E-44 T 23-10-2018 IPR010653 NlpB/DapX lipoprotein DLM_2413 0160c56e328a36df3fea0667365d8868 632 Gene3D G3DSA:3.30.1370.100 488 583 5.4E-57 T 23-10-2018 DLM_2413 0160c56e328a36df3fea0667365d8868 632 SUPERFAMILY SSF55874 2 202 4.45E-55 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2413 0160c56e328a36df3fea0667365d8868 632 SMART SM00853 445 588 1.7E-52 T 23-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DLM_2413 0160c56e328a36df3fea0667365d8868 632 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 325 1.4E-38 T 23-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DLM_2413 0160c56e328a36df3fea0667365d8868 632 SMART SM01340 208 326 5.3E-56 T 23-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DLM_2413 0160c56e328a36df3fea0667365d8868 632 Gene3D G3DSA:3.30.230.10 213 325 5.4E-38 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_2413 0160c56e328a36df3fea0667365d8868 632 Gene3D G3DSA:3.30.565.10 2 211 3.1E-64 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2413 0160c56e328a36df3fea0667365d8868 632 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 120 2.1E-10 T 23-10-2018 DLM_2413 0160c56e328a36df3fea0667365d8868 632 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 306 2.2E-93 T 23-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 DLM_2413 0160c56e328a36df3fea0667365d8868 632 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 628 27.922 T 23-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 DLM_2413 0160c56e328a36df3fea0667365d8868 632 SUPERFAMILY SSF118116 441 630 1.44E-56 T 23-10-2018 IPR037198 MutL, C-terminal domain superfamily DLM_2413 0160c56e328a36df3fea0667365d8868 632 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 23-10-2018 IPR014762 DNA mismatch repair, conserved site DLM_2413 0160c56e328a36df3fea0667365d8868 632 SUPERFAMILY SSF54211 191 326 1.67E-37 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_2413 0160c56e328a36df3fea0667365d8868 632 Gene3D G3DSA:2.30.42.20 447 625 5.4E-57 T 23-10-2018 DLM_2413 0160c56e328a36df3fea0667365d8868 632 Pfam PF08676 MutL C terminal dimerisation domain 441 588 4.5E-47 T 23-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DLM_2525 473d81c173e79ac6986414b7c332381e 938 TIGRFAM TIGR00422 valS: valine--tRNA ligase 4 919 0.0 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DLM_2525 473d81c173e79ac6986414b7c332381e 938 SUPERFAMILY SSF47323 636 888 6.92E-66 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_2525 473d81c173e79ac6986414b7c332381e 938 Gene3D G3DSA:1.10.287.380 866 938 2.0E-15 T 23-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DLM_2525 473d81c173e79ac6986414b7c332381e 938 SUPERFAMILY SSF52374 3 635 7.78E-136 T 23-10-2018 DLM_2525 473d81c173e79ac6986414b7c332381e 938 Gene3D G3DSA:1.10.730.10 595 813 1.2E-72 T 23-10-2018 DLM_2525 473d81c173e79ac6986414b7c332381e 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 625 1.2E-202 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_2525 473d81c173e79ac6986414b7c332381e 938 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DLM_2525 473d81c173e79ac6986414b7c332381e 938 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DLM_2525 473d81c173e79ac6986414b7c332381e 938 PRINTS PR00986 Valyl-tRNA synthetase signature 362 375 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DLM_2525 473d81c173e79ac6986414b7c332381e 938 PRINTS PR00986 Valyl-tRNA synthetase signature 37 48 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DLM_2525 473d81c173e79ac6986414b7c332381e 938 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DLM_2525 473d81c173e79ac6986414b7c332381e 938 Gene3D G3DSA:3.90.740.10 238 283 8.0E-6 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DLM_2525 473d81c173e79ac6986414b7c332381e 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_2525 473d81c173e79ac6986414b7c332381e 938 Pfam PF08264 Anticodon-binding domain of tRNA 669 818 1.0E-41 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DLM_2525 473d81c173e79ac6986414b7c332381e 938 SUPERFAMILY SSF46589 873 937 4.34E-13 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DLM_2525 473d81c173e79ac6986414b7c332381e 938 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 938 15.711 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DLM_2525 473d81c173e79ac6986414b7c332381e 938 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 874 937 9.3E-18 T 23-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 DLM_2525 473d81c173e79ac6986414b7c332381e 938 Gene3D G3DSA:3.40.50.620 324 549 9.5E-75 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_2525 473d81c173e79ac6986414b7c332381e 938 Gene3D G3DSA:3.40.50.620 4 220 2.1E-62 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_2525 473d81c173e79ac6986414b7c332381e 938 SUPERFAMILY SSF50677 192 358 3.66E-56 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 Gene3D G3DSA:1.10.287.730 144 170 2.7E-5 T 23-10-2018 DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 312 323 - T 23-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 Gene3D G3DSA:3.40.50.150 228 417 3.6E-59 T 23-10-2018 DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 6 416 9.9E-110 T 23-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 Gene3D G3DSA:1.10.940.10 1 140 2.4E-30 T 23-10-2018 IPR035926 NusB-like superfamily DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 Gene3D G3DSA:3.30.70.1170 171 227 1.3E-17 T 23-10-2018 DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 SUPERFAMILY SSF48013 3 147 1.26E-27 T 23-10-2018 IPR035926 NusB-like superfamily DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 363 379 1.0E-24 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 313 325 1.0E-24 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 399 416 1.0E-24 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.0E-24 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.0E-24 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 Pfam PF01029 NusB family 3 124 2.9E-19 T 23-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 397 4.2E-53 T 23-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DLM_4314 4e764cd0833479e6f57f1c0bb60afa52 417 SUPERFAMILY SSF53335 139 416 9.36E-67 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1863 7612a886a83262333903168bbb2d6394 209 SMART SM00421 146 203 5.5E-18 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1863 7612a886a83262333903168bbb2d6394 209 Gene3D G3DSA:3.40.50.12740 2 209 2.7E-60 T 23-10-2018 DLM_1863 7612a886a83262333903168bbb2d6394 209 SUPERFAMILY SSF46894 137 209 3.74E-20 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_1863 7612a886a83262333903168bbb2d6394 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 7.6E-19 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1863 7612a886a83262333903168bbb2d6394 209 SUPERFAMILY SSF52172 2 132 2.13E-33 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1863 7612a886a83262333903168bbb2d6394 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1863 7612a886a83262333903168bbb2d6394 209 Pfam PF00072 Response regulator receiver domain 4 116 9.2E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1863 7612a886a83262333903168bbb2d6394 209 SMART SM00448 2 115 1.7E-30 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1863 7612a886a83262333903168bbb2d6394 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.3E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1863 7612a886a83262333903168bbb2d6394 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.3E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1863 7612a886a83262333903168bbb2d6394 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.3E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 SUPERFAMILY SSF54427 14 126 3.91E-17 T 23-10-2018 IPR032710 NTF2-like domain superfamily DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 Pfam PF12833 Helix-turn-helix domain 179 259 3.7E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 254 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 SUPERFAMILY SSF46689 223 258 4.93E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 Gene3D G3DSA:1.10.10.60 154 205 2.4E-6 T 23-10-2018 DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 Gene3D G3DSA:3.10.450.50 14 135 1.7E-14 T 23-10-2018 DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 SMART SM00342 173 258 6.3E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 Pfam PF12680 SnoaL-like domain 20 118 1.3E-8 T 23-10-2018 IPR037401 SnoaL-like domain DLM_4072 a1cbf110fb147de7c1b671919cb3a55a 275 Gene3D G3DSA:1.10.10.60 206 261 3.2E-13 T 23-10-2018 DLM_0292 f52ab76c6cf671ce16cb78865558cd33 288 Gene3D G3DSA:1.10.150.650 98 170 3.8E-90 T 23-10-2018 DLM_0292 f52ab76c6cf671ce16cb78865558cd33 288 Gene3D G3DSA:3.20.20.140 4 251 3.8E-90 T 23-10-2018 DLM_0292 f52ab76c6cf671ce16cb78865558cd33 288 Pfam PF02811 PHP domain 5 187 1.9E-8 T 23-10-2018 IPR004013 PHP domain GO:0003824 DLM_0292 f52ab76c6cf671ce16cb78865558cd33 288 SUPERFAMILY SSF89550 3 278 2.35E-47 T 23-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DLM_0292 f52ab76c6cf671ce16cb78865558cd33 288 SMART SM00481 4 69 2.1E-16 T 23-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DLM_0204 280c0a971489677fe2e0120b2cd8fc71 338 Gene3D G3DSA:3.30.200.70 22 117 1.6E-120 T 23-10-2018 DLM_0204 280c0a971489677fe2e0120b2cd8fc71 338 Hamap MF_01497 Stress response kinase A [srkA]. 13 330 48.315 T 23-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DLM_0204 280c0a971489677fe2e0120b2cd8fc71 338 Gene3D G3DSA:1.10.510.10 69 270 1.6E-120 T 23-10-2018 DLM_0204 280c0a971489677fe2e0120b2cd8fc71 338 Gene3D G3DSA:1.20.1270.170 158 319 1.6E-120 T 23-10-2018 DLM_0204 280c0a971489677fe2e0120b2cd8fc71 338 SUPERFAMILY SSF56112 14 336 2.19E-85 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_0204 280c0a971489677fe2e0120b2cd8fc71 338 Pfam PF01636 Phosphotransferase enzyme family 45 275 6.0E-39 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 SMART SM00387 448 559 1.9E-33 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 Gene3D G3DSA:3.30.450.20 193 281 6.9E-22 T 23-10-2018 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 SMART SM00388 334 399 1.8E-19 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 Gene3D G3DSA:1.10.287.130 313 397 7.9E-26 T 23-10-2018 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 Gene3D G3DSA:3.30.565.10 398 561 3.7E-47 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 SUPERFAMILY SSF55874 388 557 6.02E-45 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 Pfam PF00512 His Kinase A (phospho-acceptor) domain 334 399 8.9E-17 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 SUPERFAMILY SSF47384 318 400 2.75E-21 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 558 5.0E-27 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 Pfam PF02743 Cache domain 54 241 6.0E-14 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 512 3.8E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 498 3.8E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 556 3.8E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 537 3.8E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2710 c3a6d698c4a16e914e0bd8adec2aad36 562 Gene3D G3DSA:3.30.450.20 48 190 1.0E-30 T 23-10-2018 DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 248 7.6E-59 T 23-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 6.7E-193 T 23-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 Gene3D G3DSA:3.40.47.10 262 413 5.7E-53 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 368 6.9E-36 T 23-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 SUPERFAMILY SSF53901 3 253 1.91E-78 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 23-10-2018 IPR018201 Beta-ketoacyl synthase, active site DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 Gene3D G3DSA:3.40.47.10 1 256 9.2E-91 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 PIRSF PIRSF000447 1 413 2.4E-183 T 23-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 SMART SM00825 Beta-ketoacyl synthase 6 413 7.1E-16 T 23-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DLM_2855 e58fcca88ab3fcf1976a07ab3f316a74 413 SUPERFAMILY SSF53901 215 412 4.99E-68 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 SUPERFAMILY SSF54292 236 351 4.04E-29 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 SUPERFAMILY SSF52343 95 243 2.49E-32 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 Gene3D G3DSA:2.40.30.10 3 106 5.4E-21 T 23-10-2018 DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 Pfam PF00970 Oxidoreductase FAD-binding domain 9 104 4.4E-12 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 Gene3D G3DSA:3.10.20.30 248 355 6.1E-29 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 SUPERFAMILY SSF63380 3 106 5.73E-23 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 Pfam PF00175 Oxidoreductase NAD-binding domain 119 226 3.0E-14 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 272 343 3.3E-15 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 5 353 6.3E-141 T 23-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 DLM_3138 d3743a49b886cad0fb03e48555bcef4a 355 Gene3D G3DSA:3.40.50.80 110 247 2.9E-29 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 Pfam PF03023 MviN-like protein 28 470 4.3E-141 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 501 1.1E-151 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 PRINTS PR01806 Virulence factor MviN signature 157 178 3.5E-80 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 PRINTS PR01806 Virulence factor MviN signature 259 285 3.5E-80 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 PRINTS PR01806 Virulence factor MviN signature 33 52 3.5E-80 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 PRINTS PR01806 Virulence factor MviN signature 52 68 3.5E-80 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 PRINTS PR01806 Virulence factor MviN signature 133 157 3.5E-80 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 PRINTS PR01806 Virulence factor MviN signature 409 426 3.5E-80 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 PRINTS PR01806 Virulence factor MviN signature 357 376 3.5E-80 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 19.699 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_3189 ea17a431af4cc683fd1ec7b7cbcda70b 511 PIRSF PIRSF002869 1 511 7.3E-163 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DLM_1682 166ac416c3cdb406847e6b1bd4fb8371 428 Pfam PF01593 Flavin containing amine oxidoreductase 18 272 1.8E-17 T 23-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DLM_1682 166ac416c3cdb406847e6b1bd4fb8371 428 Gene3D G3DSA:3.90.660.20 40 298 2.0E-26 T 23-10-2018 DLM_1682 166ac416c3cdb406847e6b1bd4fb8371 428 SUPERFAMILY SSF51905 10 417 6.15E-51 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1682 166ac416c3cdb406847e6b1bd4fb8371 428 Gene3D G3DSA:1.10.3110.10 109 203 2.0E-26 T 23-10-2018 DLM_1682 166ac416c3cdb406847e6b1bd4fb8371 428 Gene3D G3DSA:3.50.50.60 12 290 2.0E-26 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 SUPERFAMILY SSF55347 149 315 2.09E-47 T 23-10-2018 DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 140 7.3E-39 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 SMART SM00859 3 141 3.7E-64 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 Gene3D G3DSA:3.40.50.720 3 333 1.4E-124 T 23-10-2018 DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 318 1.5E-17 T 23-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 Gene3D G3DSA:3.30.360.10 147 315 1.4E-124 T 23-10-2018 DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 SUPERFAMILY SSF51735 2 166 1.09E-51 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 341 41.543 T 23-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 347 6.1E-124 T 23-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_3329 84040a62a3d5fe4dc4b75a903a941a0e 347 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 23-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 SMART SM00382 347 525 1.6E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 SMART SM00382 26 225 3.7E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 Gene3D G3DSA:3.40.50.300 5 275 4.7E-58 T 23-10-2018 DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 Pfam PF00005 ABC transporter 17 178 4.5E-23 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 Gene3D G3DSA:3.40.50.300 276 558 7.1E-51 T 23-10-2018 DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 Pfam PF12848 ABC transporter 217 298 2.1E-27 T 23-10-2018 IPR032781 ABC-transporter extension domain DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 SUPERFAMILY SSF52540 2 251 2.79E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 SUPERFAMILY SSF52540 300 531 1.18E-38 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0918 6373c9fae91a66408cd7b72968a79f23 559 Pfam PF00005 ABC transporter 339 480 2.4E-23 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 SUPERFAMILY SSF54991 691 789 6.54E-29 T 23-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Gene3D G3DSA:3.30.930.10 485 686 9.7E-59 T 23-10-2018 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Pfam PF03483 B3/4 domain 212 385 1.2E-66 T 23-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Gene3D G3DSA:3.30.70.380 697 789 2.3E-28 T 23-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 SMART SM00873 212 385 3.8E-91 T 23-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Gene3D G3DSA:3.50.40.10 198 394 2.8E-77 T 23-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 SUPERFAMILY SSF56037 197 392 1.75E-72 T 23-10-2018 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Pfam PF03147 Ferredoxin-fold anticodon binding domain 696 789 2.5E-30 T 23-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Gene3D G3DSA:3.30.56.10 7 180 4.4E-70 T 23-10-2018 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Gene3D G3DSA:2.40.50.140 39 154 4.4E-70 T 23-10-2018 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 783 45.767 T 23-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 SUPERFAMILY SSF46955 404 473 6.13E-19 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 SUPERFAMILY SSF50249 39 193 2.94E-49 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 SMART SM00896 696 789 2.9E-41 T 23-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 SUPERFAMILY SSF55681 465 683 2.44E-49 T 23-10-2018 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Pfam PF01588 Putative tRNA binding domain 45 145 1.4E-22 T 23-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Pfam PF03484 tRNA synthetase B5 domain 404 469 2.3E-20 T 23-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 789 5.2E-254 T 23-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 Gene3D G3DSA:3.30.56.10 399 473 2.2E-24 T 23-10-2018 DLM_2400 56ff244e975815ad4a6fbc19a6dbd33b 790 SMART SM00874 401 469 2.2E-28 T 23-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DLM_3430 3fb216aa508f7ef14213ad1e07f11dc2 127 PIRSF PIRSF005610 1 122 3.2E-25 T 23-10-2018 IPR007360 Invasion gene expression up-regulator, SirB DLM_3430 3fb216aa508f7ef14213ad1e07f11dc2 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 4 122 1.8E-35 T 23-10-2018 IPR007360 Invasion gene expression up-regulator, SirB DLM_1137 c141656b092bac6effc6a465506f73ec 629 SUPERFAMILY SSF53955 468 623 1.22E-45 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_1137 c141656b092bac6effc6a465506f73ec 629 SUPERFAMILY SSF48435 27 465 3.14E-82 T 23-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 DLM_1137 c141656b092bac6effc6a465506f73ec 629 Gene3D G3DSA:1.10.530.10 463 622 8.8E-45 T 23-10-2018 DLM_1137 c141656b092bac6effc6a465506f73ec 629 Gene3D G3DSA:1.25.20.10 25 369 6.3E-53 T 23-10-2018 DLM_1137 c141656b092bac6effc6a465506f73ec 629 Pfam PF01464 Transglycosylase SLT domain 474 577 9.7E-24 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 DLM_2000 20d796732b736a1c926f9026e1d333e1 148 SUPERFAMILY SSF48013 3 136 6.8E-36 T 23-10-2018 IPR035926 NusB-like superfamily DLM_2000 20d796732b736a1c926f9026e1d333e1 148 Pfam PF01029 NusB family 6 131 6.3E-28 T 23-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DLM_2000 20d796732b736a1c926f9026e1d333e1 148 Gene3D G3DSA:1.10.940.10 1 139 3.3E-39 T 23-10-2018 IPR035926 NusB-like superfamily DLM_2000 20d796732b736a1c926f9026e1d333e1 148 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 3 135 20.061 T 23-10-2018 IPR011605 NusB antitermination factor GO:0006353 DLM_2000 20d796732b736a1c926f9026e1d333e1 148 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 133 3.0E-35 T 23-10-2018 IPR011605 NusB antitermination factor GO:0006353 DLM_1839 ea2bdb6ff67e0f04b43bcd0947611449 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 4.6E-29 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1839 ea2bdb6ff67e0f04b43bcd0947611449 91 SMART SM00411 1 90 3.3E-33 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1839 ea2bdb6ff67e0f04b43bcd0947611449 91 SUPERFAMILY SSF47729 1 90 1.91E-27 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_1839 ea2bdb6ff67e0f04b43bcd0947611449 91 Gene3D G3DSA:4.10.520.10 1 90 5.8E-30 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_1839 ea2bdb6ff67e0f04b43bcd0947611449 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-8 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1839 ea2bdb6ff67e0f04b43bcd0947611449 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-8 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1839 ea2bdb6ff67e0f04b43bcd0947611449 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-8 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_3005 9de7de22fa1cf6503bc3f3640627bd82 178 PIRSF PIRSF004682 1 177 2.9E-51 T 23-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DLM_3005 9de7de22fa1cf6503bc3f3640627bd82 178 Pfam PF13242 HAD-hyrolase-like 99 170 4.4E-8 T 23-10-2018 DLM_3005 9de7de22fa1cf6503bc3f3640627bd82 178 Gene3D G3DSA:3.40.50.1000 1 178 2.1E-49 T 23-10-2018 IPR023214 HAD superfamily DLM_3005 9de7de22fa1cf6503bc3f3640627bd82 178 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 142 3.9E-42 T 23-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DLM_3005 9de7de22fa1cf6503bc3f3640627bd82 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 146 1.2E-33 T 23-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DLM_3005 9de7de22fa1cf6503bc3f3640627bd82 178 SUPERFAMILY SSF56784 1 175 4.73E-41 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1532 19a39d175811da0e2c9d786f18170c43 470 SUPERFAMILY SSF51679 1 438 6.54E-122 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_1532 19a39d175811da0e2c9d786f18170c43 470 Gene3D G3DSA:3.20.20.30 1 456 3.3E-144 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_1532 19a39d175811da0e2c9d786f18170c43 470 PIRSF PIRSF000337 2 446 1.0E-140 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DLM_1532 19a39d175811da0e2c9d786f18170c43 470 Pfam PF00296 Luciferase-like monooxygenase 32 387 8.2E-50 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DLM_1532 19a39d175811da0e2c9d786f18170c43 470 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 432 1.4E-162 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 33 229 1.4E-74 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 38 228 1.1E-82 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 Pfam PF00925 GTP cyclohydrolase II 241 386 1.8E-28 T 23-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 SUPERFAMILY SSF142695 234 388 2.75E-40 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 Gene3D G3DSA:3.40.50.10990 236 389 1.0E-18 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 PIRSF PIRSF001259 31 390 7.5E-115 T 23-10-2018 DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 SUPERFAMILY SSF55821 29 232 4.35E-87 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 Gene3D G3DSA:3.90.870.10 24 235 7.5E-88 T 23-10-2018 DLM_2002 1ace3a6900d171bda7fde4fc0b90be6c 398 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 31 233 38.612 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_3191 a2347d0456f8dd6cf8da3de8c98a4893 279 SUPERFAMILY SSF55620 183 262 7.41E-8 T 23-10-2018 DLM_3191 a2347d0456f8dd6cf8da3de8c98a4893 279 Pfam PF14489 QueF-like protein 192 268 1.9E-27 T 23-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DLM_3191 a2347d0456f8dd6cf8da3de8c98a4893 279 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 279 153.206 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DLM_3191 a2347d0456f8dd6cf8da3de8c98a4893 279 TIGRFAM TIGR03138 QueF: queuine synthase 11 279 8.5E-127 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DLM_3191 a2347d0456f8dd6cf8da3de8c98a4893 279 PIRSF PIRSF004750 5 279 1.1E-125 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DLM_3191 a2347d0456f8dd6cf8da3de8c98a4893 279 Gene3D G3DSA:3.30.1130.10 19 137 5.8E-42 T 23-10-2018 DLM_3191 a2347d0456f8dd6cf8da3de8c98a4893 279 Gene3D G3DSA:3.30.1130.10 142 279 4.9E-57 T 23-10-2018 DLM_3191 a2347d0456f8dd6cf8da3de8c98a4893 279 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 19 128 1.6E-48 T 23-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DLM_3996 54f258b32059cc52cf0e314074c487a8 156 Pfam PF01928 CYTH domain 4 133 3.6E-9 T 23-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DLM_3996 54f258b32059cc52cf0e314074c487a8 156 SUPERFAMILY SSF55154 1 148 1.14E-40 T 23-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 DLM_3996 54f258b32059cc52cf0e314074c487a8 156 SMART SM01118 2 147 2.3E-20 T 23-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DLM_3996 54f258b32059cc52cf0e314074c487a8 156 Gene3D G3DSA:2.40.320.10 1 149 6.5E-42 T 23-10-2018 DLM_3996 54f258b32059cc52cf0e314074c487a8 156 PIRSF PIRSF016487 1 156 7.9E-62 T 23-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like DLM_0859 b204e627eafb27adfe328adf5e40ebd9 215 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 2 101 3.4E-16 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_0859 b204e627eafb27adfe328adf5e40ebd9 215 Gene3D G3DSA:1.10.3720.10 1 209 2.7E-51 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0859 b204e627eafb27adfe328adf5e40ebd9 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 15 206 3.9E-23 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0859 b204e627eafb27adfe328adf5e40ebd9 215 SUPERFAMILY SSF161098 2 192 1.31E-39 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0161 b94e78136535b0e0e65a7644042aced0 334 PIRSF PIRSF000114 1 329 2.1E-97 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 SUPERFAMILY SSF51735 1 177 2.11E-45 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0161 b94e78136535b0e0e65a7644042aced0 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 177 317 7.4E-50 T 23-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 157 5.4E-42 T 23-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 SUPERFAMILY SSF48179 176 328 1.45E-53 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 Gene3D G3DSA:1.10.1040.10 186 332 1.6E-49 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 Gene3D G3DSA:3.40.50.720 1 184 1.3E-53 T 23-10-2018 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 130 150 3.3E-45 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 252 3.3E-45 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 195 219 3.3E-45 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 3.3E-45 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 54 81 3.3E-45 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 194 3.3E-45 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 185 206 - T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_0161 b94e78136535b0e0e65a7644042aced0 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 319 36.722 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DLM_3835 a1d51725904691a29aab3a234526c089 184 SUPERFAMILY SSF55785 21 117 5.58E-24 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3835 a1d51725904691a29aab3a234526c089 184 Gene3D G3DSA:3.30.450.20 1 117 1.9E-21 T 23-10-2018 DLM_3835 a1d51725904691a29aab3a234526c089 184 Pfam PF08447 PAS fold 32 112 8.8E-10 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_3835 a1d51725904691a29aab3a234526c089 184 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 115 7.5E-10 T 23-10-2018 IPR000014 PAS domain DLM_1370 55bde6bb903690b746251758b260a7b7 278 SUPERFAMILY SSF52540 37 276 6.56E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1370 55bde6bb903690b746251758b260a7b7 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 256 277 6.8E-8 T 23-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DLM_1370 55bde6bb903690b746251758b260a7b7 278 Pfam PF00005 ABC transporter 53 208 4.0E-26 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1370 55bde6bb903690b746251758b260a7b7 278 Gene3D G3DSA:3.40.50.300 32 278 1.5E-50 T 23-10-2018 DLM_1370 55bde6bb903690b746251758b260a7b7 278 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 37 278 3.9E-116 T 23-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 5.3E-16 T 23-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 PIRSF PIRSF039088 1 514 2.7E-235 T 23-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 SUPERFAMILY SSF47917 383 511 1.94E-41 T 23-10-2018 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 SUPERFAMILY SSF50615 10 94 1.63E-28 T 23-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.885 T 23-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 Gene3D G3DSA:2.40.30.20 1 93 4.2E-33 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 512 1.6E-242 T 23-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 23-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 Gene3D G3DSA:1.20.150.20 383 513 1.0E-41 T 23-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 SUPERFAMILY SSF52540 96 381 5.61E-94 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.5E-40 T 23-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.5E-72 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3662 7af530e1d1e420b0d8dfcd138c91c33a 514 Gene3D G3DSA:3.40.50.300 94 382 6.2E-130 T 23-10-2018 DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 SMART SM00988 1 64 9.8E-18 T 23-10-2018 IPR004029 UreE urease accessory, N-terminal DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 138 23.875 T 23-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 PIRSF PIRSF036402 2 148 4.4E-46 T 23-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 Pfam PF02814 UreE urease accessory protein, N-terminal domain 16 63 6.6E-14 T 23-10-2018 IPR004029 UreE urease accessory, N-terminal DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 Gene3D G3DSA:3.30.70.790 71 141 9.5E-28 T 23-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 SUPERFAMILY SSF69287 1 70 4.84E-17 T 23-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 SUPERFAMILY SSF69737 70 137 7.72E-22 T 23-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 Pfam PF05194 UreE urease accessory protein, C-terminal domain 71 147 3.2E-27 T 23-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 DLM_1376 02ba59db1db436e5c81ea83c54e392ea 165 Gene3D G3DSA:2.60.260.20 1 70 1.6E-22 T 23-10-2018 DLM_1654 d210c377a21049c16599dbf8298c1f52 300 Gene3D G3DSA:3.40.190.10 164 269 3.0E-57 T 23-10-2018 DLM_1654 d210c377a21049c16599dbf8298c1f52 300 SUPERFAMILY SSF53850 91 299 2.9E-40 T 23-10-2018 DLM_1654 d210c377a21049c16599dbf8298c1f52 300 Gene3D G3DSA:3.40.190.10 94 292 3.0E-57 T 23-10-2018 DLM_1654 d210c377a21049c16599dbf8298c1f52 300 SUPERFAMILY SSF46785 2 114 8.37E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1654 d210c377a21049c16599dbf8298c1f52 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 65 3.4E-21 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1654 d210c377a21049c16599dbf8298c1f52 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.9E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1654 d210c377a21049c16599dbf8298c1f52 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.9E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1654 d210c377a21049c16599dbf8298c1f52 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.9E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1654 d210c377a21049c16599dbf8298c1f52 300 Gene3D G3DSA:1.10.10.10 1 86 8.8E-28 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1654 d210c377a21049c16599dbf8298c1f52 300 Pfam PF03466 LysR substrate binding domain 89 295 3.2E-40 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_4297 98500ecdac714ca1f03129050439d0b0 162 Gene3D G3DSA:3.40.30.10 28 161 3.1E-37 T 23-10-2018 DLM_4297 98500ecdac714ca1f03129050439d0b0 162 Pfam PF08534 Redoxin 23 140 1.4E-22 T 23-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DLM_4297 98500ecdac714ca1f03129050439d0b0 162 SUPERFAMILY SSF52833 10 159 9.64E-34 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3572 e5631787ebf50ef3bbda487008b5b99f 103 Pfam PF13473 Cupredoxin-like domain 4 102 3.3E-27 T 23-10-2018 IPR028096 EfeO-type cupredoxin-like domain DLM_3572 e5631787ebf50ef3bbda487008b5b99f 103 SUPERFAMILY SSF49503 3 102 6.09E-14 T 23-10-2018 IPR008972 Cupredoxin DLM_3572 e5631787ebf50ef3bbda487008b5b99f 103 Gene3D G3DSA:2.60.40.420 8 103 1.2E-20 T 23-10-2018 IPR008972 Cupredoxin DLM_1659 f8f2d078679756c8aa170bb7d3337c23 427 Gene3D G3DSA:3.50.50.60 31 382 2.2E-70 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1659 f8f2d078679756c8aa170bb7d3337c23 427 Gene3D G3DSA:3.30.9.10 123 344 2.2E-70 T 23-10-2018 DLM_1659 f8f2d078679756c8aa170bb7d3337c23 427 SUPERFAMILY SSF51905 30 411 2.33E-42 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1659 f8f2d078679756c8aa170bb7d3337c23 427 Pfam PF01266 FAD dependent oxidoreductase 31 381 2.8E-52 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_2345 2b6c3cd1764fc99bbd11fdbed7b10f19 346 SUPERFAMILY SSF55326 18 163 6.8E-33 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_2345 2b6c3cd1764fc99bbd11fdbed7b10f19 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 172 324 1.0E-30 T 23-10-2018 IPR010918 PurM-like, C-terminal domain DLM_2345 2b6c3cd1764fc99bbd11fdbed7b10f19 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 160 7.2E-16 T 23-10-2018 IPR016188 PurM-like, N-terminal domain DLM_2345 2b6c3cd1764fc99bbd11fdbed7b10f19 346 Gene3D G3DSA:3.30.1330.10 17 165 3.4E-51 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_2345 2b6c3cd1764fc99bbd11fdbed7b10f19 346 SUPERFAMILY SSF56042 167 341 8.97E-47 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_2345 2b6c3cd1764fc99bbd11fdbed7b10f19 346 Gene3D G3DSA:3.90.650.10 166 346 1.4E-57 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_2345 2b6c3cd1764fc99bbd11fdbed7b10f19 346 PIRSF PIRSF005644 12 346 5.6E-122 T 23-10-2018 IPR011854 Carbamoyl dehydratase HypE DLM_2345 2b6c3cd1764fc99bbd11fdbed7b10f19 346 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 16 346 8.5E-138 T 23-10-2018 IPR011854 Carbamoyl dehydratase HypE DLM_3746 834110148850a6f938f9e1edb11d8f6f 103 SUPERFAMILY SSF54909 1 102 3.0E-24 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_3746 834110148850a6f938f9e1edb11d8f6f 103 Pfam PF07876 Stress responsive A/B Barrel Domain 2 101 2.6E-21 T 23-10-2018 IPR013097 Stress responsive alpha-beta barrel DLM_3746 834110148850a6f938f9e1edb11d8f6f 103 Gene3D G3DSA:3.30.70.100 1 103 2.6E-26 T 23-10-2018 DLM_3746 834110148850a6f938f9e1edb11d8f6f 103 SMART SM00886 2 102 1.4E-23 T 23-10-2018 IPR013097 Stress responsive alpha-beta barrel DLM_0135 8b0149454876776496042568d8f01240 642 Pfam PF04539 Sigma-70 region 3 482 557 3.6E-28 T 23-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 SUPERFAMILY SSF88659 476 549 3.49E-21 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_0135 8b0149454876776496042568d8f01240 642 Gene3D G3DSA:1.10.601.10 133 472 2.7E-127 T 23-10-2018 DLM_0135 8b0149454876776496042568d8f01240 642 SUPERFAMILY SSF88659 533 635 2.24E-27 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_0135 8b0149454876776496042568d8f01240 642 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 427 440 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 596 622 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 Pfam PF00140 Sigma-70 factor, region 1.2 118 150 3.9E-14 T 23-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_0135 8b0149454876776496042568d8f01240 642 Pfam PF04542 Sigma-70 region 2 403 472 1.9E-21 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 Pfam PF03979 Sigma-70 factor, region 1.1 22 101 2.7E-28 T 23-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 Gene3D G3DSA:1.10.10.10 476 551 5.2E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0135 8b0149454876776496042568d8f01240 642 Gene3D G3DSA:1.10.220.120 21 83 2.7E-27 T 23-10-2018 DLM_0135 8b0149454876776496042568d8f01240 642 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 399 624 1.9E-39 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 Gene3D G3DSA:1.10.10.10 553 637 1.9E-36 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0135 8b0149454876776496042568d8f01240 642 SUPERFAMILY SSF88946 135 470 7.22E-98 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 399 635 1.6E-121 T 23-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DLM_0135 8b0149454876776496042568d8f01240 642 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 23 636 45.036 T 23-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DLM_0135 8b0149454876776496042568d8f01240 642 Pfam PF04545 Sigma-70, region 4 571 624 7.2E-20 T 23-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 PRINTS PR00046 Major sigma-70 factor signature 611 622 3.7E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 PRINTS PR00046 Major sigma-70 factor signature 596 611 3.7E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 PRINTS PR00046 Major sigma-70 factor signature 575 587 3.7E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 PRINTS PR00046 Major sigma-70 factor signature 451 459 3.7E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 PRINTS PR00046 Major sigma-70 factor signature 427 440 3.7E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0135 8b0149454876776496042568d8f01240 642 Pfam PF04546 Sigma-70, non-essential region 159 372 4.6E-61 T 23-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_0940 b8866ce971834218658ac2182dfe650b 316 Pfam PF00072 Response regulator receiver domain 184 303 2.2E-12 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0940 b8866ce971834218658ac2182dfe650b 316 Pfam PF01584 CheW-like domain 22 162 3.5E-34 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0940 b8866ce971834218658ac2182dfe650b 316 PIRSF PIRSF002867 1 315 9.1E-104 T 23-10-2018 IPR024181 Chemotaxis response regulator CheV DLM_0940 b8866ce971834218658ac2182dfe650b 316 Gene3D G3DSA:2.40.50.180 45 160 2.7E-28 T 23-10-2018 DLM_0940 b8866ce971834218658ac2182dfe650b 316 SUPERFAMILY SSF50341 16 162 1.01E-28 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_0940 b8866ce971834218658ac2182dfe650b 316 SUPERFAMILY SSF52172 183 312 5.41E-20 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0940 b8866ce971834218658ac2182dfe650b 316 Gene3D G3DSA:3.40.50.2300 178 316 6.1E-21 T 23-10-2018 DLM_0940 b8866ce971834218658ac2182dfe650b 316 SMART SM00260 17 160 3.8E-23 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0940 b8866ce971834218658ac2182dfe650b 316 SMART SM00448 182 311 1.2E-8 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0940 b8866ce971834218658ac2182dfe650b 316 Gene3D G3DSA:2.30.30.40 36 154 2.7E-28 T 23-10-2018 DLM_1538 799fda0c275feeea6b60c126160869fe 410 SUPERFAMILY SSF47203 236 380 1.64E-12 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_1538 799fda0c275feeea6b60c126160869fe 410 SUPERFAMILY SSF56645 24 225 1.44E-43 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_1538 799fda0c275feeea6b60c126160869fe 410 Gene3D G3DSA:2.40.110.10 128 224 5.9E-31 T 23-10-2018 DLM_1538 799fda0c275feeea6b60c126160869fe 410 Gene3D G3DSA:1.10.540.10 12 127 5.1E-20 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_1538 799fda0c275feeea6b60c126160869fe 410 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 111 2.9E-6 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_1538 799fda0c275feeea6b60c126160869fe 410 PIRSF PIRSF016578 150 397 7.9E-16 T 23-10-2018 DLM_1538 799fda0c275feeea6b60c126160869fe 410 PIRSF PIRSF016578 3 89 3.5E-9 T 23-10-2018 DLM_1538 799fda0c275feeea6b60c126160869fe 410 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 380 7.1E-12 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DLM_1538 799fda0c275feeea6b60c126160869fe 410 Gene3D G3DSA:1.20.140.10 225 404 6.1E-53 T 23-10-2018 DLM_1190 ab43c3f9c55b2da9be50371559569481 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 31 191 1.4E-52 T 23-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DLM_1190 ab43c3f9c55b2da9be50371559569481 202 SUPERFAMILY SSF89392 21 199 3.77E-51 T 23-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DLM_1190 ab43c3f9c55b2da9be50371559569481 202 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 4 201 31.298 T 23-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 DLM_1190 ab43c3f9c55b2da9be50371559569481 202 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 198 4.9E-25 T 23-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 DLM_1190 ab43c3f9c55b2da9be50371559569481 202 Gene3D G3DSA:2.50.20.10 17 200 3.0E-55 T 23-10-2018 DLM_3323 c91a1a23a617eac046cacde060ffe38d 142 Pfam PF03061 Thioesterase superfamily 49 122 7.3E-11 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DLM_3323 c91a1a23a617eac046cacde060ffe38d 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 133 2.7E-13 T 23-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DLM_3323 c91a1a23a617eac046cacde060ffe38d 142 Gene3D G3DSA:3.10.129.10 6 138 6.3E-50 T 23-10-2018 DLM_3323 c91a1a23a617eac046cacde060ffe38d 142 SUPERFAMILY SSF54637 6 139 1.15E-29 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_0346 6f002369679c9def28372600e8b5365a 326 SUPERFAMILY SSF51735 3 155 7.31E-44 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0346 6f002369679c9def28372600e8b5365a 326 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 157 320 6.6E-31 T 23-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DLM_0346 6f002369679c9def28372600e8b5365a 326 PIRSF PIRSF000102 1 324 3.7E-60 T 23-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DLM_0346 6f002369679c9def28372600e8b5365a 326 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 325 56.368 T 23-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DLM_0346 6f002369679c9def28372600e8b5365a 326 Gene3D G3DSA:3.90.110.10 155 326 2.6E-61 T 23-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DLM_0346 6f002369679c9def28372600e8b5365a 326 SUPERFAMILY SSF56327 157 325 5.56E-58 T 23-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DLM_0346 6f002369679c9def28372600e8b5365a 326 Gene3D G3DSA:3.40.50.720 1 154 3.1E-59 T 23-10-2018 DLM_0346 6f002369679c9def28372600e8b5365a 326 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 152 3.3E-35 T 23-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0346 6f002369679c9def28372600e8b5365a 326 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 320 6.6E-147 T 23-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DLM_4018 3c481876bf625821476f8aa4ff7c3bc0 244 SUPERFAMILY SSF52540 1 226 4.75E-74 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4018 3c481876bf625821476f8aa4ff7c3bc0 244 PIRSF PIRSF039085 1 243 3.5E-101 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DLM_4018 3c481876bf625821476f8aa4ff7c3bc0 244 SMART SM00382 26 213 8.1E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4018 3c481876bf625821476f8aa4ff7c3bc0 244 Pfam PF00005 ABC transporter 18 165 2.5E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4018 3c481876bf625821476f8aa4ff7c3bc0 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_4018 3c481876bf625821476f8aa4ff7c3bc0 244 Gene3D G3DSA:3.40.50.300 1 244 8.9E-72 T 23-10-2018 DLM_2806 3165af1d781881203e984b2127538fe9 386 SUPERFAMILY SSF48452 68 248 1.82E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_2806 3165af1d781881203e984b2127538fe9 386 Pfam PF13176 Tetratricopeptide repeat 75 100 0.0011 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_2806 3165af1d781881203e984b2127538fe9 386 Gene3D G3DSA:1.25.40.10 31 347 6.4E-18 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_2806 3165af1d781881203e984b2127538fe9 386 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 385 30.303 T 23-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 DLM_2580 b94d90dc279acd3cf468a4239a58936e 325 Gene3D G3DSA:3.30.479.30 68 214 1.1E-7 T 23-10-2018 DLM_2580 b94d90dc279acd3cf468a4239a58936e 325 SMART SM00244 37 211 0.0085 T 23-10-2018 IPR001107 Band 7 domain DLM_2580 b94d90dc279acd3cf468a4239a58936e 325 Pfam PF01145 SPFH domain / Band 7 family 41 225 2.0E-26 T 23-10-2018 IPR001107 Band 7 domain DLM_2580 b94d90dc279acd3cf468a4239a58936e 325 SUPERFAMILY SSF117892 71 216 4.58E-12 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily DLM_2580 b94d90dc279acd3cf468a4239a58936e 325 PIRSF PIRSF005651 13 319 6.3E-80 T 23-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DLM_1565 3ee4adeed4d6775b49b90a16e5e9451e 202 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 178 5.0E-65 T 23-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DLM_1565 3ee4adeed4d6775b49b90a16e5e9451e 202 Gene3D G3DSA:3.20.130.10 1 177 5.3E-63 T 23-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DLM_1565 3ee4adeed4d6775b49b90a16e5e9451e 202 SUPERFAMILY SSF117457 3 175 3.66E-57 T 23-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DLM_1565 3ee4adeed4d6775b49b90a16e5e9451e 202 Pfam PF05683 Fumarase C-terminus 9 178 1.0E-38 T 23-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Pfam PF02743 Cache domain 38 271 2.5E-15 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 SUPERFAMILY SSF55073 463 621 1.65E-51 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 SMART SM00267 447 619 4.9E-68 T 23-10-2018 IPR000160 GGDEF domain DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Pfam PF00989 PAS fold 328 444 3.3E-12 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 SUPERFAMILY SSF103190 37 188 9.81E-6 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Pfam PF00990 Diguanylate cyclase, GGDEF domain 458 615 1.8E-51 T 23-10-2018 IPR000160 GGDEF domain DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Gene3D G3DSA:3.30.70.270 452 632 1.6E-61 T 23-10-2018 DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 SUPERFAMILY SSF141868 636 882 8.24E-89 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 SUPERFAMILY SSF55785 315 444 2.27E-20 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Gene3D G3DSA:3.30.450.20 317 444 6.3E-22 T 23-10-2018 DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Gene3D G3DSA:3.30.450.20 185 275 5.2E-19 T 23-10-2018 DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 SMART SM00091 327 399 5.5E-4 T 23-10-2018 IPR000014 PAS domain DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Gene3D G3DSA:3.20.20.450 633 883 5.0E-98 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Gene3D G3DSA:3.30.450.20 30 182 6.3E-29 T 23-10-2018 DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 SMART SM00052 629 874 7.6E-114 T 23-10-2018 IPR001633 EAL domain DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 Pfam PF00563 EAL domain 635 869 6.0E-71 T 23-10-2018 IPR001633 EAL domain DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 453 5.3E-12 T 23-10-2018 IPR000014 PAS domain DLM_3620 4b9eff085437f4a25377ec16dc48ba2c 893 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 456 618 1.2E-44 T 23-10-2018 IPR000160 GGDEF domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00091 532 598 7.9E-7 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00091 655 725 11.0 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00091 18 85 1.6E-9 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00091 402 470 0.0019 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00091 153 223 2.1 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00091 271 343 3.3E-4 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SUPERFAMILY SSF55785 517 641 9.03E-21 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Gene3D G3DSA:3.30.70.270 775 947 1.8E-59 T 23-10-2018 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Gene3D G3DSA:3.30.450.20 176 256 6.5E-11 T 23-10-2018 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Gene3D G3DSA:3.30.450.20 269 388 1.0E-22 T 23-10-2018 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 292 397 2.7E-12 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 150 1.1E-16 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 529 650 5.5E-20 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 656 779 7.8E-6 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 425 525 9.5E-11 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SUPERFAMILY SSF55785 640 770 8.95E-11 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Gene3D G3DSA:2.10.70.100 474 520 2.6E-13 T 23-10-2018 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00086 104 145 27.0 T 23-10-2018 IPR001610 PAC motif DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00086 603 643 0.49 T 23-10-2018 IPR001610 PAC motif DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00086 349 390 4.2E-5 T 23-10-2018 IPR001610 PAC motif DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00086 477 520 4.5E-4 T 23-10-2018 IPR001610 PAC motif DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Pfam PF08448 PAS fold 546 645 1.4E-8 T 23-10-2018 IPR013656 PAS fold-4 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Pfam PF00990 Diguanylate cyclase, GGDEF domain 783 940 5.6E-45 T 23-10-2018 IPR000160 GGDEF domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Gene3D G3DSA:3.30.450.20 13 162 3.8E-23 T 23-10-2018 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SUPERFAMILY SSF55785 16 143 1.57E-17 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SMART SM00267 772 944 5.3E-59 T 23-10-2018 IPR000160 GGDEF domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SUPERFAMILY SSF55785 292 399 2.36E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SUPERFAMILY SSF55073 788 945 5.57E-48 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Pfam PF08447 PAS fold 299 382 1.8E-15 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Pfam PF08447 PAS fold 178 249 6.1E-13 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Pfam PF08447 PAS fold 426 514 6.9E-21 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 780 943 7.0E-52 T 23-10-2018 IPR000160 GGDEF domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SUPERFAMILY SSF55785 176 266 2.09E-11 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Pfam PF13188 PAS domain 659 688 0.097 T 23-10-2018 IPR000014 PAS domain DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Gene3D G3DSA:3.30.450.20 521 641 4.6E-21 T 23-10-2018 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Pfam PF00989 PAS fold 20 142 7.0E-10 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 SUPERFAMILY SSF55785 387 518 1.77E-22 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Gene3D G3DSA:3.30.450.20 644 774 1.8E-11 T 23-10-2018 DLM_2017 de49a7de0182241408e5e3814b1c757e 955 Gene3D G3DSA:3.30.450.20 397 469 9.6E-19 T 23-10-2018 DLM_2757 801f142f8d58c777ca27b94fb5aa3368 575 Gene3D G3DSA:1.10.760.10 53 150 2.1E-35 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2757 801f142f8d58c777ca27b94fb5aa3368 575 SUPERFAMILY SSF46626 22 166 8.02E-23 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2757 801f142f8d58c777ca27b94fb5aa3368 575 Gene3D G3DSA:2.140.10.20 151 575 5.8E-197 T 23-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily DLM_2757 801f142f8d58c777ca27b94fb5aa3368 575 Pfam PF02239 Cytochrome D1 heme domain 179 570 7.9E-157 T 23-10-2018 DLM_2757 801f142f8d58c777ca27b94fb5aa3368 575 SUPERFAMILY SSF51004 151 575 8.63E-125 T 23-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DLM_2757 801f142f8d58c777ca27b94fb5aa3368 575 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 70 142 2.0E-11 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SMART SM00052 738 984 7.1E-117 T 23-10-2018 IPR001633 EAL domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SMART SM00091 320 385 1.9E-4 T 23-10-2018 IPR000014 PAS domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SMART SM00091 437 503 0.0016 T 23-10-2018 IPR000014 PAS domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SMART SM01079 38 221 1.6E-40 T 23-10-2018 IPR006189 CHASE domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SMART SM00086 509 551 2.0E-7 T 23-10-2018 IPR001610 PAC motif DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SMART SM00086 390 430 0.051 T 23-10-2018 IPR001610 PAC motif DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Pfam PF13426 PAS domain 448 550 1.4E-15 T 23-10-2018 IPR000014 PAS domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Pfam PF13426 PAS domain 331 429 5.1E-8 T 23-10-2018 IPR000014 PAS domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Gene3D G3DSA:3.30.70.270 560 741 1.8E-63 T 23-10-2018 DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SUPERFAMILY SSF55785 448 560 4.89E-28 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SUPERFAMILY SSF55785 331 438 1.27E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SUPERFAMILY SSF141868 744 990 4.58E-90 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SMART SM00267 551 728 1.6E-64 T 23-10-2018 IPR000160 GGDEF domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Gene3D G3DSA:3.30.450.20 434 559 1.6E-34 T 23-10-2018 DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Pfam PF03924 CHASE domain 104 191 4.7E-14 T 23-10-2018 IPR006189 CHASE domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Pfam PF00563 EAL domain 744 979 1.2E-69 T 23-10-2018 IPR001633 EAL domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 SUPERFAMILY SSF55073 567 730 2.35E-49 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Gene3D G3DSA:3.30.450.20 310 428 2.4E-22 T 23-10-2018 DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 559 727 1.6E-42 T 23-10-2018 IPR000160 GGDEF domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 436 6.6E-17 T 23-10-2018 IPR000014 PAS domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 446 557 2.0E-19 T 23-10-2018 IPR000014 PAS domain DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Gene3D G3DSA:3.20.20.450 742 992 8.1E-99 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3689 c0a511fecdb9cd43f6dbf627ab730013 992 Pfam PF00990 Diguanylate cyclase, GGDEF domain 562 724 5.2E-50 T 23-10-2018 IPR000160 GGDEF domain DLM_2161 d88620a14b22bd801790dc12a2dff23a 259 SUPERFAMILY SSF55781 73 249 4.84E-36 T 23-10-2018 DLM_2161 d88620a14b22bd801790dc12a2dff23a 259 Gene3D G3DSA:3.30.450.40 76 254 8.4E-41 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_2161 d88620a14b22bd801790dc12a2dff23a 259 Pfam PF09339 IclR helix-turn-helix domain 5 54 1.7E-14 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DLM_2161 d88620a14b22bd801790dc12a2dff23a 259 Pfam PF01614 Bacterial transcriptional regulator 124 247 8.9E-18 T 23-10-2018 IPR014757 Transcription regulator IclR, C-terminal DLM_2161 d88620a14b22bd801790dc12a2dff23a 259 SUPERFAMILY SSF46785 4 75 4.21E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2161 d88620a14b22bd801790dc12a2dff23a 259 Gene3D G3DSA:1.10.10.10 2 75 2.8E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2161 d88620a14b22bd801790dc12a2dff23a 259 SMART SM00346 2 92 3.9E-20 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DLM_4458 98818c8084c1ab3bb8b89a649ee58611 387 Gene3D G3DSA:3.40.640.10 1 258 7.6E-102 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_4458 98818c8084c1ab3bb8b89a649ee58611 387 SUPERFAMILY SSF53383 6 386 1.93E-114 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4458 98818c8084c1ab3bb8b89a649ee58611 387 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 382 8.9E-134 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_4458 98818c8084c1ab3bb8b89a649ee58611 387 PIRSF PIRSF000390 3 387 2.6E-118 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_4458 98818c8084c1ab3bb8b89a649ee58611 387 Gene3D G3DSA:3.90.1150.10 261 386 8.7E-34 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2055 f21ada5bb9629be881dbe166c03b6d04 245 Gene3D G3DSA:3.40.50.80 119 244 6.0E-27 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_2055 f21ada5bb9629be881dbe166c03b6d04 245 Gene3D G3DSA:2.40.30.10 5 64 2.0E-10 T 23-10-2018 DLM_2055 f21ada5bb9629be881dbe166c03b6d04 245 Gene3D G3DSA:2.40.30.10 65 118 8.6E-15 T 23-10-2018 DLM_2055 f21ada5bb9629be881dbe166c03b6d04 245 SUPERFAMILY SSF63380 13 119 5.9E-10 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_2055 f21ada5bb9629be881dbe166c03b6d04 245 Pfam PF04954 Siderophore-interacting protein 125 236 1.5E-23 T 23-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain DLM_2055 f21ada5bb9629be881dbe166c03b6d04 245 Pfam PF08021 Siderophore-interacting FAD-binding domain 67 117 5.9E-13 T 23-10-2018 IPR013113 FAD-binding 9, siderophore-interacting DLM_2055 f21ada5bb9629be881dbe166c03b6d04 245 Pfam PF08021 Siderophore-interacting FAD-binding domain 24 66 3.7E-6 T 23-10-2018 IPR013113 FAD-binding 9, siderophore-interacting DLM_4354 c332b261862ecd44a8ded0e8c53e92b8 285 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 74 276 41.452 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_4354 c332b261862ecd44a8ded0e8c53e92b8 285 SUPERFAMILY SSF55821 75 274 3.43E-81 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DLM_4354 c332b261862ecd44a8ded0e8c53e92b8 285 Gene3D G3DSA:3.90.870.10 67 279 5.3E-87 T 23-10-2018 DLM_4354 c332b261862ecd44a8ded0e8c53e92b8 285 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 78 271 2.2E-72 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_4354 c332b261862ecd44a8ded0e8c53e92b8 285 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 82 270 2.4E-80 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 SUPERFAMILY SSF55073 272 429 9.42E-51 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 Gene3D G3DSA:3.30.450.20 140 264 2.0E-18 T 23-10-2018 DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 SUPERFAMILY SSF141868 444 685 8.76E-85 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 426 9.7E-45 T 23-10-2018 IPR000160 GGDEF domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 Pfam PF13426 PAS domain 32 128 0.48 T 23-10-2018 IPR000014 PAS domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 SMART SM00091 17 83 0.011 T 23-10-2018 IPR000014 PAS domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 SMART SM00091 142 208 1.7E-6 T 23-10-2018 IPR000014 PAS domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 Gene3D G3DSA:3.30.70.270 265 441 2.3E-59 T 23-10-2018 DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 262 1.3E-13 T 23-10-2018 IPR000014 PAS domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 136 1.2E-15 T 23-10-2018 IPR000014 PAS domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 Gene3D G3DSA:3.20.20.450 442 687 1.0E-93 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 SMART SM00052 438 678 2.8E-107 T 23-10-2018 IPR001633 EAL domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 SUPERFAMILY SSF55785 35 138 3.66E-13 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 423 1.0E-50 T 23-10-2018 IPR000160 GGDEF domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 SUPERFAMILY SSF55785 127 254 1.74E-20 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 Pfam PF08448 PAS fold 149 258 7.1E-13 T 23-10-2018 IPR013656 PAS fold-4 DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 SMART SM00267 256 428 5.6E-66 T 23-10-2018 IPR000160 GGDEF domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 Pfam PF00563 EAL domain 444 673 1.4E-72 T 23-10-2018 IPR001633 EAL domain DLM_1753 ba5b26358cf172ea3b821797749f60dd 689 Gene3D G3DSA:3.30.450.20 22 139 2.1E-14 T 23-10-2018 DLM_2015 f0096c932c076478295ac4351bd6e046 476 Gene3D G3DSA:3.40.605.10 26 446 1.7E-153 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_2015 f0096c932c076478295ac4351bd6e046 476 PIRSF PIRSF036492 5 475 5.1E-159 T 23-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DLM_2015 f0096c932c076478295ac4351bd6e046 476 SUPERFAMILY SSF53720 13 473 6.68E-116 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_2015 f0096c932c076478295ac4351bd6e046 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 248 259 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_2015 f0096c932c076478295ac4351bd6e046 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 220 227 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_2015 f0096c932c076478295ac4351bd6e046 476 Gene3D G3DSA:3.40.309.10 224 426 1.7E-153 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_2015 f0096c932c076478295ac4351bd6e046 476 Pfam PF00171 Aldehyde dehydrogenase family 33 445 3.5E-90 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0543 b8d9baa056422ef808efe85847719148 158 Gene3D G3DSA:3.10.50.40 3 152 1.9E-42 T 23-10-2018 DLM_0543 b8d9baa056422ef808efe85847719148 158 SUPERFAMILY SSF54534 2 138 5.7E-25 T 23-10-2018 DLM_0543 b8d9baa056422ef808efe85847719148 158 Gene3D G3DSA:2.40.10.330 70 119 1.9E-42 T 23-10-2018 DLM_1441 9c455ea5612408636c90dead320f6086 79 SUPERFAMILY SSF52833 1 78 1.07E-16 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_1441 9c455ea5612408636c90dead320f6086 79 Gene3D G3DSA:3.40.30.10 1 75 1.8E-19 T 23-10-2018 DLM_1441 9c455ea5612408636c90dead320f6086 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 75 3.7E-17 T 23-10-2018 IPR008554 Glutaredoxin-like DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 SUPERFAMILY SSF82693 40 134 3.66E-22 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 SUPERFAMILY SSF82693 660 836 7.15E-9 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Gene3D G3DSA:3.30.2090.10 702 790 1.0E-301 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Gene3D G3DSA:3.30.2090.10 179 269 1.0E-301 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 SUPERFAMILY SSF82693 136 324 1.31E-22 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Pfam PF00873 AcrB/AcrD/AcrF family 7 1009 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Gene3D G3DSA:1.20.1640.10 504 1006 1.0E-301 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 SUPERFAMILY SSF82866 290 491 1.96E-48 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Gene3D G3DSA:3.30.70.1430 558 650 1.0E-301 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.3E-83 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Gene3D G3DSA:1.20.1640.10 10 503 1.0E-301 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Gene3D G3DSA:3.30.70.1430 40 798 1.0E-301 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 SUPERFAMILY SSF82714 183 265 1.96E-15 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 SUPERFAMILY SSF82693 556 651 1.1E-14 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 SUPERFAMILY SSF82714 705 787 4.32E-18 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Gene3D G3DSA:3.30.70.1320 135 326 1.0E-301 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 SUPERFAMILY SSF82866 813 1011 5.23E-42 T 23-10-2018 DLM_3525 a8670f09c9c4adbbd94931b3ddcdd0ac 1033 Gene3D G3DSA:3.30.70.1440 651 848 1.0E-301 T 23-10-2018 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 219 341 9.3E-34 T 23-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 Gene3D G3DSA:3.30.465.10 76 231 8.1E-55 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 SUPERFAMILY SSF56176 11 200 3.71E-40 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 83.35 T 23-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 Pfam PF01565 FAD binding domain 38 154 2.1E-20 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 12 338 5.4E-71 T 23-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 Gene3D G3DSA:3.90.78.10 232 342 6.4E-41 T 23-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 SUPERFAMILY SSF56194 215 341 3.4E-46 T 23-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_0646 ea5c006ba7e2b0384cc4f8c663605cd9 342 Gene3D G3DSA:3.30.43.10 1 74 3.3E-22 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DLM_2057 d812e5fbd7ced8dd7e4d992783801966 312 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 81 293 2.7E-33 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2057 d812e5fbd7ced8dd7e4d992783801966 312 Gene3D G3DSA:3.40.190.10 82 292 7.5E-39 T 23-10-2018 DLM_2057 d812e5fbd7ced8dd7e4d992783801966 312 SMART SM00062 65 296 5.4E-20 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2057 d812e5fbd7ced8dd7e4d992783801966 312 Gene3D G3DSA:3.40.190.10 150 256 7.5E-39 T 23-10-2018 DLM_2057 d812e5fbd7ced8dd7e4d992783801966 312 SUPERFAMILY SSF53850 63 294 2.12E-41 T 23-10-2018 DLM_1840 320659698a679f9e79bd557553d9fd7a 98 Gene3D G3DSA:2.10.109.10 3 97 2.2E-18 T 23-10-2018 DLM_1840 320659698a679f9e79bd557553d9fd7a 98 Pfam PF00717 Peptidase S24-like 26 80 1.7E-4 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DLM_1840 320659698a679f9e79bd557553d9fd7a 98 SUPERFAMILY SSF51306 9 93 3.49E-18 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DLM_2401 eb095a06ef7f5f745214cde897737703 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.7E-23 T 23-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DLM_2401 eb095a06ef7f5f745214cde897737703 327 SUPERFAMILY SSF55681 92 327 2.49E-78 T 23-10-2018 DLM_2401 eb095a06ef7f5f745214cde897737703 327 SUPERFAMILY SSF46589 12 99 2.93E-21 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DLM_2401 eb095a06ef7f5f745214cde897737703 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.902 T 23-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 DLM_2401 eb095a06ef7f5f745214cde897737703 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 326 4.7E-103 T 23-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DLM_2401 eb095a06ef7f5f745214cde897737703 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.2E-102 T 23-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 DLM_2401 eb095a06ef7f5f745214cde897737703 327 Gene3D G3DSA:3.30.930.10 8 327 9.4E-120 T 23-10-2018 DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 Gene3D G3DSA:1.10.287.470 103 169 4.2E-6 T 23-10-2018 DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 Gene3D G3DSA:2.40.50.100 205 239 2.4E-20 T 23-10-2018 DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 SUPERFAMILY SSF111369 40 119 7.98E-9 T 23-10-2018 DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 Gene3D G3DSA:1.10.287.470 175 204 2.4E-20 T 23-10-2018 DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 Pfam PF13533 Biotin-lipoyl like 43 89 4.5E-12 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 Gene3D G3DSA:2.40.50.100 42 102 2.6E-15 T 23-10-2018 DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 Gene3D G3DSA:2.40.30.170 240 319 2.4E-20 T 23-10-2018 DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 Pfam PF13437 HlyD family secretion protein 205 315 2.0E-10 T 23-10-2018 DLM_3984 5c0ece8b6d9b0bd9389b0039b9c1d12c 325 SUPERFAMILY SSF111369 175 323 1.96E-9 T 23-10-2018 DLM_2130 dc866017583a31c2587d2441d199659a 368 Gene3D G3DSA:2.40.160.10 25 368 2.5E-60 T 23-10-2018 IPR023614 Porin domain superfamily DLM_2130 dc866017583a31c2587d2441d199659a 368 SUPERFAMILY SSF56935 25 368 2.96E-52 T 23-10-2018 DLM_2130 dc866017583a31c2587d2441d199659a 368 Pfam PF13609 Gram-negative porin 13 337 1.1E-36 T 23-10-2018 DLM_2130 dc866017583a31c2587d2441d199659a 368 PRINTS PR00184 Neisseria sp. porin signature 57 82 6.7E-10 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2130 dc866017583a31c2587d2441d199659a 368 PRINTS PR00184 Neisseria sp. porin signature 236 256 6.7E-10 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 413 6.7E-26 T 23-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 411 4.7E-124 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 Gene3D G3DSA:3.30.460.30 2 154 1.9E-54 T 23-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 SUPERFAMILY SSF69742 1 153 7.59E-46 T 23-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 Gene3D G3DSA:3.40.50.720 157 309 4.3E-41 T 23-10-2018 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 SUPERFAMILY SSF51735 159 311 9.77E-32 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 152 6.6E-47 T 23-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 23-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 167 302 1.1E-43 T 23-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 PIRSF PIRSF000445 1 417 1.7E-148 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 414 29.407 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_4054 62b133643e88c401f8bf8fef9ae41120 417 SUPERFAMILY SSF69075 313 414 1.44E-26 T 23-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DLM_3258 e350db99b2153c87eb0ec16a114932c8 177 Gene3D G3DSA:3.30.1380.20 26 177 1.1E-10 T 23-10-2018 DLM_3258 e350db99b2153c87eb0ec16a114932c8 177 SUPERFAMILY SSF111126 4 175 2.51E-21 T 23-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily DLM_3258 e350db99b2153c87eb0ec16a114932c8 177 Pfam PF02830 V4R domain 120 176 8.8E-12 T 23-10-2018 IPR004096 4-vinyl reductase, 4VR DLM_3258 e350db99b2153c87eb0ec16a114932c8 177 SMART SM00989 108 176 1.7E-6 T 23-10-2018 IPR004096 4-vinyl reductase, 4VR DLM_3170 c005674b5bd848481a28b2d17dc2390f 329 Gene3D G3DSA:3.30.160.60 295 328 1.7E-9 T 23-10-2018 DLM_3170 c005674b5bd848481a28b2d17dc2390f 329 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 325 33.566 T 23-10-2018 IPR003770 Endolytic murein transglycosylase DLM_3170 c005674b5bd848481a28b2d17dc2390f 329 Gene3D G3DSA:1.10.8.1150 29 101 1.6E-9 T 23-10-2018 DLM_3170 c005674b5bd848481a28b2d17dc2390f 329 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 324 4.8E-85 T 23-10-2018 IPR003770 Endolytic murein transglycosylase DLM_3170 c005674b5bd848481a28b2d17dc2390f 329 Pfam PF02618 YceG-like family 35 320 2.2E-83 T 23-10-2018 IPR003770 Endolytic murein transglycosylase DLM_3145 755b8ddc015589ec9ff6a58302ba9f7c 265 Gene3D G3DSA:1.10.12.10 208 265 3.1E-22 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DLM_3145 755b8ddc015589ec9ff6a58302ba9f7c 265 SUPERFAMILY SSF52096 3 264 9.96E-83 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_3145 755b8ddc015589ec9ff6a58302ba9f7c 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 264 1.5E-65 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_3145 755b8ddc015589ec9ff6a58302ba9f7c 265 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 10 265 2.7E-118 T 23-10-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 DLM_3145 755b8ddc015589ec9ff6a58302ba9f7c 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DLM_3145 755b8ddc015589ec9ff6a58302ba9f7c 265 Gene3D G3DSA:3.90.226.10 3 206 2.4E-71 T 23-10-2018 DLM_2419 459ada699cd5a97f83eedbe4e3b3b390 546 Pfam PF01566 Natural resistance-associated macrophage protein 65 419 6.4E-79 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 SUPERFAMILY SSF52518 2 375 3.12E-82 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 276 4.5E-123 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 Gene3D G3DSA:3.40.50.970 311 485 5.7E-66 T 23-10-2018 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 SUPERFAMILY SSF52518 311 498 2.22E-58 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 SMART SM00861 313 477 1.1E-66 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 ProSitePatterns PS00802 Transketolase signature 2. 419 435 - T 23-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 Gene3D G3DSA:3.40.50.920 489 615 8.2E-39 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 614 1.7E-266 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 SUPERFAMILY SSF52922 487 614 3.93E-30 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 615 46.418 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 Pfam PF02780 Transketolase, C-terminal domain 489 606 9.3E-24 T 23-10-2018 IPR033248 Transketolase, C-terminal domain DLM_2540 2304d76dfb1c3abdcc3b16ded3379b64 616 Pfam PF02779 Transketolase, pyrimidine binding domain 313 472 3.5E-41 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 Gene3D G3DSA:3.40.50.180 162 353 2.6E-76 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 SMART SM00448 3 126 1.5E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 353 39.319 T 23-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 Pfam PF00072 Response regulator receiver domain 5 108 2.7E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 PIRSF PIRSF000876 1 353 9.0E-134 T 23-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 SUPERFAMILY SSF52172 3 108 6.12E-28 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 Pfam PF01339 CheB methylesterase 173 351 7.6E-63 T 23-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 SUPERFAMILY SSF52738 168 352 1.27E-71 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_0206 99ee1cd7fe23f1df247a0b471a8fe0e0 353 Gene3D G3DSA:3.40.50.2300 2 132 8.6E-31 T 23-10-2018 DLM_3732 ca43fce3b093cf82bf11de7fd5ffe49f 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 2.6E-64 T 23-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DLM_3732 ca43fce3b093cf82bf11de7fd5ffe49f 163 SUPERFAMILY SSF55021 1 76 6.59E-22 T 23-10-2018 DLM_3732 ca43fce3b093cf82bf11de7fd5ffe49f 163 SUPERFAMILY SSF55021 79 162 2.9E-26 T 23-10-2018 DLM_3732 ca43fce3b093cf82bf11de7fd5ffe49f 163 Pfam PF13710 ACT domain 13 73 1.6E-15 T 23-10-2018 DLM_3732 ca43fce3b093cf82bf11de7fd5ffe49f 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-36 T 23-10-2018 DLM_3732 ca43fce3b093cf82bf11de7fd5ffe49f 163 Gene3D G3DSA:3.30.70.260 1 79 1.4E-35 T 23-10-2018 DLM_3732 ca43fce3b093cf82bf11de7fd5ffe49f 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 6.6E-27 T 23-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DLM_3732 ca43fce3b093cf82bf11de7fd5ffe49f 163 Gene3D G3DSA:3.30.70.1150 83 163 4.2E-30 T 23-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 Gene3D G3DSA:1.10.10.10 1 90 3.0E-34 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 Gene3D G3DSA:3.40.190.10 91 288 4.0E-63 T 23-10-2018 DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.0E-24 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 SUPERFAMILY SSF46785 1 84 7.98E-26 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 Pfam PF03466 LysR substrate binding domain 87 293 5.2E-41 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 Gene3D G3DSA:3.40.190.10 165 270 4.0E-63 T 23-10-2018 DLM_1408 923cfb631d5e9b6495cbb429e942bb2d 298 SUPERFAMILY SSF53850 89 296 3.58E-40 T 23-10-2018 DLM_0912 135ba929a721f321f6f93136720e0c4b 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 364 2.1E-13 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_0912 135ba929a721f321f6f93136720e0c4b 376 Gene3D G3DSA:1.20.140.10 231 370 1.2E-20 T 23-10-2018 DLM_0912 135ba929a721f321f6f93136720e0c4b 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 331 350 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_0912 135ba929a721f321f6f93136720e0c4b 376 SUPERFAMILY SSF47203 237 368 5.8E-19 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_4120 025d12d49a3041ca3550ef7bed932023 402 Gene3D G3DSA:1.25.40.10 155 402 5.8E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4120 025d12d49a3041ca3550ef7bed932023 402 SUPERFAMILY SSF48452 275 396 1.88E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4120 025d12d49a3041ca3550ef7bed932023 402 Pfam PF07219 HemY protein N-terminus 26 133 1.1E-24 T 23-10-2018 IPR010817 HemY, N-terminal DLM_4120 025d12d49a3041ca3550ef7bed932023 402 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 392 1.4E-112 T 23-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 DLM_0496 071d77ee099242bdb7ad0514e45650e0 312 PIRSF PIRSF000164 1 311 2.1E-57 T 23-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DLM_0496 071d77ee099242bdb7ad0514e45650e0 312 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 246 266 - T 23-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DLM_0496 071d77ee099242bdb7ad0514e45650e0 312 Pfam PF01180 Dihydroorotate dehydrogenase 5 294 4.7E-60 T 23-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DLM_0496 071d77ee099242bdb7ad0514e45650e0 312 Gene3D G3DSA:2.30.26.10 56 222 3.4E-89 T 23-10-2018 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 DLM_0496 071d77ee099242bdb7ad0514e45650e0 312 SUPERFAMILY SSF51395 3 309 1.39E-63 T 23-10-2018 DLM_0496 071d77ee099242bdb7ad0514e45650e0 312 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 307 1.7E-46 T 23-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DLM_0496 071d77ee099242bdb7ad0514e45650e0 312 Gene3D G3DSA:3.20.20.70 15 304 3.4E-89 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 Gene3D G3DSA:3.30.160.20 216 311 4.2E-99 T 23-10-2018 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 Gene3D G3DSA:1.20.58.410 9 106 1.2E-27 T 23-10-2018 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 SMART SM00937 72 185 1.2E-56 T 23-10-2018 IPR005139 Peptide chain release factor GO:0006415 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 235 251 - T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 11 353 1.6E-157 T 23-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 Gene3D G3DSA:3.30.70.1660 120 348 4.2E-99 T 23-10-2018 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 355 38.645 T 23-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 SUPERFAMILY SSF75620 22 352 1.83E-134 T 23-10-2018 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 Pfam PF03462 PCRF domain 21 210 1.8E-60 T 23-10-2018 IPR005139 Peptide chain release factor GO:0006415 DLM_0345 b9854a31aee3b7a5b4b8108b486aee46 355 Pfam PF00472 RF-1 domain 219 327 2.7E-42 T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DLM_4486 17808ea7af0b356ead349b5ba3d76efa 203 PIRSF PIRSF004649 1 202 1.6E-46 T 23-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DLM_4486 17808ea7af0b356ead349b5ba3d76efa 203 Gene3D G3DSA:3.10.450.50 31 167 4.8E-49 T 23-10-2018 DLM_4486 17808ea7af0b356ead349b5ba3d76efa 203 Pfam PF05494 MlaC protein 31 193 4.7E-50 T 23-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DLM_4486 17808ea7af0b356ead349b5ba3d76efa 203 Gene3D G3DSA:1.10.10.640 65 192 4.8E-49 T 23-10-2018 DLM_1157 1c22be38c1dfa4722943be02f9832c73 212 Pfam PF03352 Methyladenine glycosylase 11 186 2.6E-79 T 23-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DLM_1157 1c22be38c1dfa4722943be02f9832c73 212 SUPERFAMILY SSF48150 7 189 6.91E-79 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DLM_1157 1c22be38c1dfa4722943be02f9832c73 212 Gene3D G3DSA:1.10.340.30 6 192 4.2E-83 T 23-10-2018 DLM_1157 1c22be38c1dfa4722943be02f9832c73 212 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 8 185 4.5E-74 T 23-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 DLM_1590 ab4534470ff9421803a241c3543efd03 146 Pfam PF04965 Gene 25-like lysozyme 26 125 3.8E-22 T 23-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DLM_1590 ab4534470ff9421803a241c3543efd03 146 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 1 145 8.6E-38 T 23-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein DLM_1590 ab4534470ff9421803a241c3543efd03 146 SUPERFAMILY SSF160719 27 135 5.49E-13 T 23-10-2018 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 SUPERFAMILY SSF56024 238 390 3.4E-23 T 23-10-2018 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 Gene3D G3DSA:3.30.870.10 17 444 2.1E-156 T 23-10-2018 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 Pfam PF13091 PLD-like domain 38 149 1.9E-8 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 Pfam PF13091 PLD-like domain 253 391 5.7E-22 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 PIRSF PIRSF000850 7 448 2.9E-191 T 23-10-2018 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 SMART SM00155 349 376 0.068 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 SMART SM00155 130 156 0.01 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 SUPERFAMILY SSF56024 24 184 3.77E-27 T 23-10-2018 DLM_3200 3361a5d497955c2637ef1c1cdc7c44e5 448 Gene3D G3DSA:3.30.870.10 22 228 2.1E-156 T 23-10-2018 DLM_0172 68bafae2ec4ce247af402f7777c44249 244 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 152 166 - T 23-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DLM_0172 68bafae2ec4ce247af402f7777c44249 244 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 243 37.073 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DLM_0172 68bafae2ec4ce247af402f7777c44249 244 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 243 4.1E-79 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DLM_0172 68bafae2ec4ce247af402f7777c44249 244 Gene3D G3DSA:3.40.50.150 27 244 2.2E-68 T 23-10-2018 DLM_0172 68bafae2ec4ce247af402f7777c44249 244 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 243 1.4E-87 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DLM_0172 68bafae2ec4ce247af402f7777c44249 244 SUPERFAMILY SSF53335 14 241 6.21E-44 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0172 68bafae2ec4ce247af402f7777c44249 244 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 23-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DLM_0829 3a20349f681281f92dd80a589478941f 245 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0829 3a20349f681281f92dd80a589478941f 245 SUPERFAMILY SSF52540 1 228 3.06E-78 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0829 3a20349f681281f92dd80a589478941f 245 SMART SM00382 31 218 5.9E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0829 3a20349f681281f92dd80a589478941f 245 Gene3D G3DSA:3.40.50.300 1 245 2.9E-74 T 23-10-2018 DLM_0829 3a20349f681281f92dd80a589478941f 245 Pfam PF00005 ABC transporter 23 170 1.0E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 PIRSF PIRSF037980 1 1005 0.0 T 23-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 Gene3D G3DSA:3.10.20.440 9 98 1.3E-5 T 23-10-2018 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 8 1004 0.0 T 23-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 SUPERFAMILY SSF101790 904 1003 1.96E-19 T 23-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 895 991 5.1E-16 T 23-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 100 8.3E-20 T 23-10-2018 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 Gene3D G3DSA:2.40.30.110 910 998 1.4E-10 T 23-10-2018 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 170 192 1.1E-7 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 323 347 1.1E-7 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 292 1.1E-7 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 170 428 3.3E-9 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 SUPERFAMILY SSF103025 614 908 9.26E-92 T 23-10-2018 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 Pfam PF01571 Aminomethyltransferase folate-binding domain 620 886 2.2E-71 T 23-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 Gene3D G3DSA:3.30.1360.120 616 875 1.3E-83 T 23-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 SUPERFAMILY SSF51905 170 492 6.24E-27 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3265 5a77fcb70b679fbfecb1ea2d903fb8c0 1005 Gene3D G3DSA:3.30.70.1400 673 901 1.3E-83 T 23-10-2018 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 PIRSF PIRSF000410 8 286 3.9E-94 T 23-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 Gene3D G3DSA:3.40.50.150 89 284 3.5E-62 T 23-10-2018 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 SUPERFAMILY SSF53335 90 282 1.8E-53 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 Gene3D G3DSA:1.10.155.10 11 88 2.6E-28 T 23-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 6.9E-44 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 6.9E-44 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 PRINTS PR00996 Glutamate methyltransferase family signature 83 95 6.9E-44 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 6.9E-44 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 PRINTS PR00996 Glutamate methyltransferase family signature 44 57 6.9E-44 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 PRINTS PR00996 Glutamate methyltransferase family signature 120 140 6.9E-44 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 Pfam PF03705 CheR methyltransferase, all-alpha domain 23 73 6.3E-19 T 23-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 SUPERFAMILY SSF47757 13 89 9.55E-22 T 23-10-2018 DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 Pfam PF01739 CheR methyltransferase, SAM binding domain 90 279 1.3E-60 T 23-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DLM_3327 11958dd0e6b4b838756cc23aa8f51328 287 SMART SM00138 22 284 8.5E-100 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 Gene3D G3DSA:1.10.150.130 2 96 4.2E-15 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 293 54.741 T 23-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 Gene3D G3DSA:1.10.443.10 107 287 4.5E-66 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 SUPERFAMILY SSF56349 104 291 3.53E-55 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 84 1.2E-15 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 8 292 2.6E-108 T 23-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 2 293 56.246 T 23-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 Pfam PF00589 Phage integrase family 109 278 6.1E-48 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DLM_3306 c592dbbdbe176a5d3855faf22991d499 293 SUPERFAMILY SSF47823 4 97 1.12E-26 T 23-10-2018 DLM_3146 7b6f179bfd7e6b76e65095878c09b654 555 SUPERFAMILY SSF53720 72 530 5.63E-56 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_3146 7b6f179bfd7e6b76e65095878c09b654 555 TIGRFAM TIGR02288 PaaN_2: phenylacetic acid degradation protein paaN 3 554 7.7E-265 T 23-10-2018 IPR011975 Phenylacetic acid degradation protein PaaN2 DLM_3146 7b6f179bfd7e6b76e65095878c09b654 555 Gene3D G3DSA:3.40.309.10 317 518 3.6E-21 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_3146 7b6f179bfd7e6b76e65095878c09b654 555 Gene3D G3DSA:3.40.605.10 75 316 8.7E-25 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_3146 7b6f179bfd7e6b76e65095878c09b654 555 Pfam PF00171 Aldehyde dehydrogenase family 89 498 8.2E-33 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_2267 6f54f3346a86826de7e7577aadc415ff 132 SUPERFAMILY SSF51316 7 131 1.99E-57 T 23-10-2018 IPR011057 Mss4-like superfamily DLM_2267 6f54f3346a86826de7e7577aadc415ff 132 Gene3D G3DSA:2.170.150.20 1 132 1.0E-60 T 23-10-2018 DLM_2267 6f54f3346a86826de7e7577aadc415ff 132 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 130 4.1E-54 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DLM_2267 6f54f3346a86826de7e7577aadc415ff 132 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 8 131 37.397 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DLM_2267 6f54f3346a86826de7e7577aadc415ff 132 Pfam PF01641 SelR domain 11 130 5.7E-54 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 297 502 3.3E-20 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 826 940 2.5E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:1.10.287.130 700 776 8.4E-20 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Pfam PF08448 PAS fold 580 692 2.5E-5 T 23-10-2018 IPR013656 PAS fold-4 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:3.30.450.20 558 699 5.2E-12 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:3.40.190.10 287 511 4.0E-48 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:1.20.120.160 1103 1205 6.2E-14 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:3.40.190.10 48 267 1.2E-44 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SMART SM00388 710 776 4.9E-18 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SUPERFAMILY SSF47384 693 777 1.65E-17 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Pfam PF00512 His Kinase A (phospho-acceptor) domain 710 776 1.0E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SMART SM00062 296 513 3.3E-11 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SMART SM00062 58 271 6.0E-12 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SMART SM00448 966 1082 7.0E-31 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:3.40.190.10 143 231 1.2E-44 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SUPERFAMILY SSF53850 289 512 8.09E-32 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SUPERFAMILY SSF47226 1065 1195 3.66E-17 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SUPERFAMILY SSF55874 766 939 1.96E-40 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 59 268 1.1E-16 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Pfam PF01627 Hpt domain 1116 1199 3.2E-12 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 PRINTS PR00344 Bacterial sensor protein C-terminal signature 925 938 6.3E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 880 6.3E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 PRINTS PR00344 Bacterial sensor protein C-terminal signature 901 919 6.3E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 PRINTS PR00344 Bacterial sensor protein C-terminal signature 884 894 6.3E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SUPERFAMILY SSF53850 51 270 1.13E-26 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:3.30.565.10 777 945 2.0E-43 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:3.40.50.2300 959 1087 5.4E-35 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SMART SM00387 825 943 3.3E-35 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Gene3D G3DSA:3.40.190.10 382 476 4.0E-48 T 23-10-2018 DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SUPERFAMILY SSF52172 966 1095 1.57E-33 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 SUPERFAMILY SSF55785 558 688 2.28E-11 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3422 f77dcfff32fff133a0a4dc8f63183b6f 1211 Pfam PF00072 Response regulator receiver domain 968 1081 1.4E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2884 04e88981961abf104a7059cf495cae24 91 SUPERFAMILY SSF54862 1 80 2.99E-18 T 23-10-2018 DLM_2884 04e88981961abf104a7059cf495cae24 91 Pfam PF11953 Domain of unknown function (DUF3470) 50 90 4.2E-19 T 23-10-2018 IPR022569 Ferredoxin, C-terminal DLM_2884 04e88981961abf104a7059cf495cae24 91 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 23 34 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_2884 04e88981961abf104a7059cf495cae24 91 Pfam PF00037 4Fe-4S binding domain 18 39 6.7E-7 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_2884 04e88981961abf104a7059cf495cae24 91 PRINTS PR00354 7Fe ferredoxin signature 18 35 4.5E-10 T 23-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DLM_2884 04e88981961abf104a7059cf495cae24 91 PRINTS PR00354 7Fe ferredoxin signature 2 12 4.5E-10 T 23-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DLM_2884 04e88981961abf104a7059cf495cae24 91 Gene3D G3DSA:3.30.70.20 1 87 1.7E-23 T 23-10-2018 DLM_1123 43d40205650bc22ccb26072b46370f6c 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_1123 43d40205650bc22ccb26072b46370f6c 495 Gene3D G3DSA:3.40.605.10 1 267 5.8E-100 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_1123 43d40205650bc22ccb26072b46370f6c 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_1123 43d40205650bc22ccb26072b46370f6c 495 Gene3D G3DSA:3.40.309.10 268 495 2.7E-82 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_1123 43d40205650bc22ccb26072b46370f6c 495 SUPERFAMILY SSF53720 10 494 3.53E-169 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_1123 43d40205650bc22ccb26072b46370f6c 495 Pfam PF00171 Aldehyde dehydrogenase family 30 490 1.3E-170 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_2531 691354dbc56123de6fb2be4873deb1f3 442 Pfam PF13657 HipA N-terminal domain 9 120 9.3E-24 T 23-10-2018 IPR017508 HipA, N-terminal subdomain 1 DLM_2531 691354dbc56123de6fb2be4873deb1f3 442 Pfam PF07804 HipA-like C-terminal domain 176 410 2.1E-47 T 23-10-2018 IPR012893 HipA-like, C-terminal DLM_0390 1ad3fdf77edafbf9f5d590ec44115d7c 409 SUPERFAMILY SSF53901 5 250 4.32E-59 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0390 1ad3fdf77edafbf9f5d590ec44115d7c 409 SUPERFAMILY SSF53901 211 408 2.69E-62 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0390 1ad3fdf77edafbf9f5d590ec44115d7c 409 Gene3D G3DSA:3.40.47.10 257 407 3.0E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0390 1ad3fdf77edafbf9f5d590ec44115d7c 409 Gene3D G3DSA:3.40.47.10 1 251 3.0E-73 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0390 1ad3fdf77edafbf9f5d590ec44115d7c 409 SMART SM00825 Beta-ketoacyl synthase 5 409 9.3E-19 T 23-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DLM_0390 1ad3fdf77edafbf9f5d590ec44115d7c 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 243 4.4E-45 T 23-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DLM_0390 1ad3fdf77edafbf9f5d590ec44115d7c 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 251 363 3.2E-31 T 23-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DLM_0662 a95cc77e6505eaaaf6fbc29dbec676d5 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0662 a95cc77e6505eaaaf6fbc29dbec676d5 192 Gene3D G3DSA:3.30.70.20 88 186 5.7E-22 T 23-10-2018 DLM_0662 a95cc77e6505eaaaf6fbc29dbec676d5 192 Gene3D G3DSA:1.10.15.40 39 87 3.2E-9 T 23-10-2018 DLM_0662 a95cc77e6505eaaaf6fbc29dbec676d5 192 SUPERFAMILY SSF54862 42 174 2.66E-28 T 23-10-2018 DLM_0662 a95cc77e6505eaaaf6fbc29dbec676d5 192 PIRSF PIRSF005784 2 191 9.9E-72 T 23-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 DLM_0662 a95cc77e6505eaaaf6fbc29dbec676d5 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 23 190 4.3E-72 T 23-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 DLM_0662 a95cc77e6505eaaaf6fbc29dbec676d5 192 Pfam PF04060 Putative Fe-S cluster 46 78 9.5E-15 T 23-10-2018 IPR007202 4Fe-4S domain GO:0051536 DLM_0662 a95cc77e6505eaaaf6fbc29dbec676d5 192 Pfam PF14697 4Fe-4S dicluster domain 111 165 2.8E-18 T 23-10-2018 DLM_3828 d93aa35363ccc6bf33224b7fab7ae731 446 SMART SM01086 341 434 8.9E-15 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_3828 d93aa35363ccc6bf33224b7fab7ae731 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 5.5E-6 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_3828 d93aa35363ccc6bf33224b7fab7ae731 446 SMART SM00382 49 338 5.1E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3828 d93aa35363ccc6bf33224b7fab7ae731 446 Pfam PF07724 AAA domain (Cdc48 subfamily) 177 335 2.1E-41 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_3828 d93aa35363ccc6bf33224b7fab7ae731 446 Gene3D G3DSA:1.10.8.60 341 443 1.6E-33 T 23-10-2018 DLM_3828 d93aa35363ccc6bf33224b7fab7ae731 446 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 446 41.082 T 23-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DLM_3828 d93aa35363ccc6bf33224b7fab7ae731 446 SUPERFAMILY SSF52540 3 435 1.39E-81 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3828 d93aa35363ccc6bf33224b7fab7ae731 446 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 446 2.0E-197 T 23-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Pfam PF01627 Hpt domain 5 94 8.4E-15 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Gene3D G3DSA:1.20.120.160 2 138 2.6E-32 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 SUPERFAMILY SSF47226 4 119 1.57E-27 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Gene3D G3DSA:1.10.287.560 392 460 1.6E-10 T 23-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 SMART SM01231 392 460 2.1E-13 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Gene3D G3DSA:2.40.50.180 671 736 8.0E-28 T 23-10-2018 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 SUPERFAMILY SSF47384 393 461 1.53E-10 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Gene3D G3DSA:2.30.30.40 648 776 8.0E-28 T 23-10-2018 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 SMART SM00387 505 648 7.4E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 393 459 8.2E-14 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Gene3D G3DSA:3.30.565.10 461 647 7.2E-57 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1238 242817a560920639e3e66b0e6428bf0b 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 645 5.7E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 564 5.7E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 602 5.7E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 626 5.7E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 SMART SM00260 640 781 9.9E-13 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 SMART SM00073 2 99 6.8E-21 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 SUPERFAMILY SSF55874 463 646 2.1E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1238 242817a560920639e3e66b0e6428bf0b 784 SUPERFAMILY SSF50341 647 781 3.14E-25 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 646 3.1E-15 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1238 242817a560920639e3e66b0e6428bf0b 784 Pfam PF01584 CheW-like domain 654 781 1.9E-16 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 SUPERFAMILY SSF55874 455 614 3.27E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 SUPERFAMILY SSF47384 390 459 3.34E-9 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 Gene3D G3DSA:1.10.287.130 369 455 8.7E-17 T 23-10-2018 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 610 1.6E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 556 1.6E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 591 1.6E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 570 1.6E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 612 8.1E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 Gene3D G3DSA:3.30.565.10 464 618 2.5E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 PIRSF PIRSF036431 1 618 9.4E-196 T 23-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 Gene3D G3DSA:3.30.450.20 43 289 9.1E-65 T 23-10-2018 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 Gene3D G3DSA:3.30.450.20 55 176 9.1E-65 T 23-10-2018 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 SUPERFAMILY SSF103190 75 188 2.94E-14 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 Pfam PF02743 Cache domain 34 226 3.1E-16 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 SMART SM00388 393 461 1.0E-5 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 Pfam PF00512 His Kinase A (phospho-acceptor) domain 394 458 9.2E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0140 5e13448dca15cd33f6e055ba41d36ef7 619 SMART SM00387 503 613 8.9E-27 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0542 e55cf4eccf9fc348e8742b69fbb767a7 294 SUPERFAMILY SSF46785 4 115 9.12E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0542 e55cf4eccf9fc348e8742b69fbb767a7 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.0E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0542 e55cf4eccf9fc348e8742b69fbb767a7 294 SUPERFAMILY SSF53850 93 288 4.59E-26 T 23-10-2018 DLM_0542 e55cf4eccf9fc348e8742b69fbb767a7 294 Pfam PF03466 LysR substrate binding domain 91 283 2.4E-28 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0542 e55cf4eccf9fc348e8742b69fbb767a7 294 Gene3D G3DSA:3.40.190.10 166 258 4.6E-49 T 23-10-2018 DLM_0542 e55cf4eccf9fc348e8742b69fbb767a7 294 Gene3D G3DSA:1.10.10.10 2 88 6.0E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0542 e55cf4eccf9fc348e8742b69fbb767a7 294 Gene3D G3DSA:3.40.190.10 99 265 4.6E-49 T 23-10-2018 DLM_0622 be70aa60cbeab2d2be5cfb0dac5e4930 499 SUPERFAMILY SSF53720 12 497 1.19E-168 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0622 be70aa60cbeab2d2be5cfb0dac5e4930 499 Gene3D G3DSA:3.40.309.10 275 464 4.0E-185 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0622 be70aa60cbeab2d2be5cfb0dac5e4930 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_0622 be70aa60cbeab2d2be5cfb0dac5e4930 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_0622 be70aa60cbeab2d2be5cfb0dac5e4930 499 Pfam PF00171 Aldehyde dehydrogenase family 31 495 3.0E-171 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0622 be70aa60cbeab2d2be5cfb0dac5e4930 499 Gene3D G3DSA:3.40.605.10 34 493 4.0E-185 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_3592 793ef0d814da202d543c2282cda6caf0 354 SMART SM00829 12 350 2.2E-6 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DLM_3592 793ef0d814da202d543c2282cda6caf0 354 Gene3D G3DSA:3.40.50.720 164 298 4.8E-83 T 23-10-2018 DLM_3592 793ef0d814da202d543c2282cda6caf0 354 Gene3D G3DSA:3.90.180.10 20 344 4.8E-83 T 23-10-2018 DLM_3592 793ef0d814da202d543c2282cda6caf0 354 Pfam PF00107 Zinc-binding dehydrogenase 186 313 1.9E-22 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_3592 793ef0d814da202d543c2282cda6caf0 354 SUPERFAMILY SSF51735 149 308 1.39E-34 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3592 793ef0d814da202d543c2282cda6caf0 354 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DLM_3592 793ef0d814da202d543c2282cda6caf0 354 SUPERFAMILY SSF50129 3 185 5.37E-42 T 23-10-2018 IPR011032 GroES-like superfamily DLM_3592 793ef0d814da202d543c2282cda6caf0 354 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 144 3.7E-28 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 Gene3D G3DSA:1.10.287.470 250 312 5.0E-11 T 23-10-2018 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 SUPERFAMILY SSF111369 72 133 8.11E-6 T 23-10-2018 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 Pfam PF13437 HlyD family secretion protein 313 420 4.1E-14 T 23-10-2018 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 Pfam PF13533 Biotin-lipoyl like 79 112 3.8E-5 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 35 460 1.3E-105 T 23-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 Gene3D G3DSA:2.40.50.100 78 137 4.9E-7 T 23-10-2018 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 440 460 2.1E-56 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 382 405 2.1E-56 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 325 346 2.1E-56 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 382 2.1E-56 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 45 68 2.1E-56 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 87 107 2.1E-56 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 440 2.1E-56 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 Gene3D G3DSA:2.40.30.170 350 437 5.0E-11 T 23-10-2018 DLM_0742 9e73b5a58fc2429f0914f3b2d4c83db3 461 Gene3D G3DSA:2.40.50.100 313 349 5.0E-11 T 23-10-2018 DLM_0606 89eccf1121f68581a7c1d8a52c1fe6d0 388 Gene3D G3DSA:1.10.540.10 1 108 1.3E-29 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_0606 89eccf1121f68581a7c1d8a52c1fe6d0 388 Gene3D G3DSA:1.20.140.10 204 388 2.8E-48 T 23-10-2018 DLM_0606 89eccf1121f68581a7c1d8a52c1fe6d0 388 PIRSF PIRSF016578 1 388 2.6E-125 T 23-10-2018 DLM_0606 89eccf1121f68581a7c1d8a52c1fe6d0 388 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 366 1.1E-36 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DLM_0606 89eccf1121f68581a7c1d8a52c1fe6d0 388 SUPERFAMILY SSF47203 231 380 1.22E-15 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_0606 89eccf1121f68581a7c1d8a52c1fe6d0 388 SUPERFAMILY SSF56645 8 200 1.57E-27 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_0606 89eccf1121f68581a7c1d8a52c1fe6d0 388 Gene3D G3DSA:2.40.110.10 109 202 1.6E-25 T 23-10-2018 DLM_0516 900e484dfedff60e4b5deac7269f8bd4 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 1.4E-91 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DLM_0516 900e484dfedff60e4b5deac7269f8bd4 382 Gene3D G3DSA:1.20.1090.10 186 381 4.3E-40 T 23-10-2018 DLM_0516 900e484dfedff60e4b5deac7269f8bd4 382 Gene3D G3DSA:3.40.50.1970 1 184 1.0E-47 T 23-10-2018 DLM_0516 900e484dfedff60e4b5deac7269f8bd4 382 SUPERFAMILY SSF56796 1 379 3.14E-99 T 23-10-2018 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 SUPERFAMILY SSF51905 1 535 7.13E-90 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 Pfam PF05199 GMC oxidoreductase 393 527 4.1E-39 T 23-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 Pfam PF00732 GMC oxidoreductase 5 300 3.5E-95 T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 Gene3D G3DSA:4.10.450.10 38 201 1.9E-176 T 23-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 Gene3D G3DSA:3.30.410.40 154 474 1.9E-176 T 23-10-2018 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 PIRSF PIRSF000137 1 541 3.4E-141 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 537 1.9E-261 T 23-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 Gene3D G3DSA:3.50.50.60 4 531 1.9E-176 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 SUPERFAMILY SSF54373 295 477 3.92E-61 T 23-10-2018 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_3275 43cb5a6dd8d546e668e304be3a8b9b71 571 Gene3D G3DSA:1.10.1220.110 99 153 1.9E-176 T 23-10-2018 DLM_1919 73b95dd15f55dc96babe4b5d13f9ecff 160 Gene3D G3DSA:1.20.120.450 3 156 1.0E-24 T 23-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DLM_1919 73b95dd15f55dc96babe4b5d13f9ecff 160 SUPERFAMILY SSF109854 8 152 1.36E-23 T 23-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DLM_1919 73b95dd15f55dc96babe4b5d13f9ecff 160 Pfam PF05163 DinB family 5 158 1.2E-14 T 23-10-2018 IPR007837 DNA damage-inducible protein DinB DLM_2745 3505839ecc1eabb0ea6b1b74b77977aa 198 SMART SM01006 21 68 1.6E-9 T 23-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain DLM_2745 3505839ecc1eabb0ea6b1b74b77977aa 198 SUPERFAMILY SSF55729 24 180 3.35E-45 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_2745 3505839ecc1eabb0ea6b1b74b77977aa 198 Pfam PF13523 Acetyltransferase (GNAT) domain 26 167 8.9E-48 T 23-10-2018 DLM_2745 3505839ecc1eabb0ea6b1b74b77977aa 198 Gene3D G3DSA:3.40.630.30 13 183 2.7E-52 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 SUPERFAMILY SSF69255 415 510 2.41E-31 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 SUPERFAMILY SSF69279 23 209 2.83E-45 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 538 645 1.6E-37 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 701 853 1.3E-53 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 SUPERFAMILY SSF69279 223 397 2.38E-14 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 9.5E-81 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 Gene3D G3DSA:3.55.50.10 112 213 3.8E-81 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 Gene3D G3DSA:2.40.50.230 408 515 2.2E-43 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 Gene3D G3DSA:2.30.110.50 33 363 3.8E-81 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 SUPERFAMILY SSF69349 500 558 6.98E-7 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 565 9.6E-98 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 Gene3D G3DSA:3.30.1920.30 246 315 3.8E-81 T 23-10-2018 DLM_2141 97acb9492c3da9ca35234e39c83ef852 877 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 557 6.3E-122 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_2791 ee8b7b837592f49e0b38e2d84116d7c5 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 4.3E-24 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_2791 ee8b7b837592f49e0b38e2d84116d7c5 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 162 182 4.3E-24 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_2791 ee8b7b837592f49e0b38e2d84116d7c5 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 200 217 4.3E-24 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_2791 ee8b7b837592f49e0b38e2d84116d7c5 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 89 110 4.3E-24 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_2791 ee8b7b837592f49e0b38e2d84116d7c5 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 246 264 4.3E-24 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_2791 ee8b7b837592f49e0b38e2d84116d7c5 297 Gene3D G3DSA:2.120.10.30 1 295 2.5E-77 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DLM_2791 ee8b7b837592f49e0b38e2d84116d7c5 297 SUPERFAMILY SSF63829 10 293 7.52E-55 T 23-10-2018 DLM_2791 ee8b7b837592f49e0b38e2d84116d7c5 297 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 265 2.1E-62 T 23-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Pfam PF09371 Tex-like protein N-terminal domain 9 192 5.2E-67 T 23-10-2018 IPR018974 Tex-like protein, N-terminal DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 SUPERFAMILY SSF158832 2 321 3.53E-114 T 23-10-2018 DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Pfam PF00575 S1 RNA binding domain 650 721 4.9E-22 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 SUPERFAMILY SSF47781 471 559 1.33E-29 T 23-10-2018 IPR010994 RuvA domain 2-like DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Pfam PF12836 Helix-hairpin-helix motif 492 556 3.9E-29 T 23-10-2018 DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Gene3D G3DSA:3.30.420.140 325 452 1.3E-152 T 23-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Pfam PF16921 Tex protein YqgF-like domain 327 452 1.3E-51 T 23-10-2018 IPR032639 Tex protein, YqgF-like domain DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 SUPERFAMILY SSF50249 638 724 2.54E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 SUPERFAMILY SSF47781 561 633 9.78E-20 T 23-10-2018 IPR010994 RuvA domain 2-like DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Gene3D G3DSA:1.10.10.650 2 109 2.1E-38 T 23-10-2018 IPR023319 Tex-like protein, HTH domain superfamily DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 SUPERFAMILY SSF53098 322 470 2.12E-51 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 SMART SM00316 650 721 2.8E-25 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 SMART SM00732 326 425 2.3E-34 T 23-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Gene3D G3DSA:2.40.50.140 632 725 1.2E-28 T 23-10-2018 DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Gene3D G3DSA:1.10.150.310 500 631 4.2E-50 T 23-10-2018 DLM_1465 14db4e030bc61fc0f0d58b057c09cb6b 772 Gene3D G3DSA:1.10.3500.10 112 499 1.3E-152 T 23-10-2018 IPR023323 Tex-like domain superfamily DLM_4281 573fa0cc57a893e35aa9d6d6240df64d 293 Gene3D G3DSA:3.30.470.20 104 248 6.6E-64 T 23-10-2018 DLM_4281 573fa0cc57a893e35aa9d6d6240df64d 293 ProSitePatterns PS01057 SAICAR synthetase signature 1. 105 119 - T 23-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_4281 573fa0cc57a893e35aa9d6d6240df64d 293 ProSitePatterns PS01058 SAICAR synthetase signature 2. 204 212 - T 23-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_4281 573fa0cc57a893e35aa9d6d6240df64d 293 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 13 291 1.1E-91 T 23-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 DLM_4281 573fa0cc57a893e35aa9d6d6240df64d 293 Pfam PF01259 SAICAR synthetase 14 268 1.3E-106 T 23-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_4281 573fa0cc57a893e35aa9d6d6240df64d 293 SUPERFAMILY SSF56104 6 292 3.92E-108 T 23-10-2018 DLM_4281 573fa0cc57a893e35aa9d6d6240df64d 293 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 12 292 29.13 T 23-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_4281 573fa0cc57a893e35aa9d6d6240df64d 293 Gene3D G3DSA:3.30.200.20 3 103 3.4E-32 T 23-10-2018 DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 SUPERFAMILY SSF46565 8 80 2.49E-16 T 23-10-2018 IPR036869 Chaperone J-domain superfamily DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 Pfam PF07743 HSCB C-terminal oligomerisation domain 93 168 4.6E-20 T 23-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 7 176 23.642 T 23-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 SMART SM00271 7 72 4.5E-9 T 23-10-2018 IPR001623 DnaJ domain DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 Pfam PF00226 DnaJ domain 9 76 3.0E-7 T 23-10-2018 IPR001623 DnaJ domain DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 19 174 4.7E-33 T 23-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 Gene3D G3DSA:1.20.1280.20 85 177 1.3E-23 T 23-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 Gene3D G3DSA:1.10.287.110 2 79 1.7E-21 T 23-10-2018 IPR036869 Chaperone J-domain superfamily DLM_3223 a6550363750bbf99a85f1b0cd39a2bd3 177 SUPERFAMILY SSF47144 84 176 7.45E-24 T 23-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 570 631 1.7E-12 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 9.6E-12 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 9.6E-12 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 282 289 9.6E-12 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 243 257 9.6E-12 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Gene3D G3DSA:3.50.50.60 15 298 3.5E-89 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 478 2.1E-13 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Pfam PF04324 BFD-like [2Fe-2S] binding domain 495 544 1.4E-14 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Gene3D G3DSA:3.30.390.30 326 405 1.1E-5 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 14 800 1.1E-276 T 23-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Gene3D G3DSA:1.10.10.1100 430 483 5.2E-9 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 289 1.7E-52 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PIRSF PIRSF037149 3 814 0.0 T 23-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Gene3D G3DSA:3.30.413.10 639 791 7.8E-34 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00397 Sirohaem Fe-binding site signature 644 662 1.5E-6 T 23-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00397 Sirohaem Fe-binding site signature 687 705 1.5E-6 T 23-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 SUPERFAMILY SSF51905 11 198 1.54E-42 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 640 774 4.3E-24 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 687 703 - T 23-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.3E-19 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.3E-19 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 1.3E-19 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 1.3E-19 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 1.3E-19 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 SUPERFAMILY SSF56014 641 808 1.2E-47 T 23-10-2018 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 SUPERFAMILY SSF55124 528 649 2.13E-23 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 SUPERFAMILY SSF51905 149 317 3.89E-29 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1924 59236dc5d4a929de76845bcfe397fe2a 818 Gene3D G3DSA:3.50.50.60 123 249 3.5E-89 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 469 631 1.1E-54 T 23-10-2018 IPR000160 GGDEF domain DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 SUPERFAMILY SSF55073 476 630 8.63E-51 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 SMART SM00267 453 632 6.8E-66 T 23-10-2018 IPR000160 GGDEF domain DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 Gene3D G3DSA:1.10.3210.10 12 275 4.5E-57 T 23-10-2018 DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 SMART SM00448 320 433 9.7E-37 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 Pfam PF00072 Response regulator receiver domain 322 433 1.2E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 Pfam PF00990 Diguanylate cyclase, GGDEF domain 471 628 3.8E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 Gene3D G3DSA:3.40.50.2300 311 455 4.2E-37 T 23-10-2018 DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 Pfam PF08668 HDOD domain 16 213 2.7E-35 T 23-10-2018 IPR013976 Metal-dependent hydrolase HDOD DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 SUPERFAMILY SSF52172 320 462 2.99E-38 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 SUPERFAMILY SSF109604 14 282 1.22E-44 T 23-10-2018 DLM_2714 530b1c96d221c9c9630b1d22ab1f1206 633 Gene3D G3DSA:3.30.70.270 466 632 5.3E-58 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 1.5E-80 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 Gene3D G3DSA:2.40.50.230 408 515 2.5E-43 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 565 3.4E-98 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 557 5.1E-122 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 Gene3D G3DSA:3.55.50.10 112 213 4.5E-81 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 Gene3D G3DSA:3.30.1920.30 246 315 4.5E-81 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 538 645 1.8E-37 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 SUPERFAMILY SSF69349 699 849 3.92E-7 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 697 849 1.1E-53 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 SUPERFAMILY SSF69349 500 558 7.77E-7 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 SUPERFAMILY SSF69279 23 209 3.0E-45 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 Gene3D G3DSA:2.30.110.50 33 363 4.5E-81 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 SUPERFAMILY SSF69255 415 510 2.62E-31 T 23-10-2018 DLM_3515 bb40e01a385053bcec9f521e3e295d29 949 SUPERFAMILY SSF69279 223 397 2.72E-14 T 23-10-2018 DLM_1870 42b4be55c0d4f512100f673398babc8f 241 Pfam PF00857 Isochorismatase family 50 200 4.6E-23 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 DLM_1870 42b4be55c0d4f512100f673398babc8f 241 SUPERFAMILY SSF52499 41 216 6.15E-40 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_1870 42b4be55c0d4f512100f673398babc8f 241 Gene3D G3DSA:3.40.50.850 38 235 8.9E-42 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_4063 0e0580a50b5b42d2801220a329714322 296 SUPERFAMILY SSF53850 90 291 1.18E-49 T 23-10-2018 DLM_4063 0e0580a50b5b42d2801220a329714322 296 SUPERFAMILY SSF46785 7 111 2.82E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4063 0e0580a50b5b42d2801220a329714322 296 Gene3D G3DSA:1.10.10.10 4 88 1.6E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4063 0e0580a50b5b42d2801220a329714322 296 Pfam PF03466 LysR substrate binding domain 89 288 8.7E-49 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_4063 0e0580a50b5b42d2801220a329714322 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 1.8E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4063 0e0580a50b5b42d2801220a329714322 296 Gene3D G3DSA:3.40.190.290 91 287 3.1E-70 T 23-10-2018 DLM_0430 231f623c1dec6acb093342da998339e4 329 SUPERFAMILY SSF52283 2 135 3.83E-39 T 23-10-2018 DLM_0430 231f623c1dec6acb093342da998339e4 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 23-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DLM_0430 231f623c1dec6acb093342da998339e4 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 23-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DLM_0430 231f623c1dec6acb093342da998339e4 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 23-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DLM_0430 231f623c1dec6acb093342da998339e4 329 Gene3D G3DSA:3.40.50.720 5 322 1.1E-133 T 23-10-2018 DLM_0430 231f623c1dec6acb093342da998339e4 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 298 2.9E-58 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DLM_0430 231f623c1dec6acb093342da998339e4 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 329 8.5E-33 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DLM_0430 231f623c1dec6acb093342da998339e4 329 SUPERFAMILY SSF51735 102 299 3.12E-57 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0430 231f623c1dec6acb093342da998339e4 329 Gene3D G3DSA:3.40.50.720 102 298 1.1E-133 T 23-10-2018 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 SUPERFAMILY SSF48179 204 301 1.84E-33 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 5.5E-138 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 Gene3D G3DSA:3.40.50.720 235 439 5.4E-81 T 23-10-2018 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 PIRSF PIRSF000124 1 439 8.3E-150 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 Gene3D G3DSA:3.40.50.720 1 202 2.3E-83 T 23-10-2018 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 1.8E-31 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 SUPERFAMILY SSF52413 305 434 3.14E-39 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 PIRSF PIRSF500134 1 439 2.0E-191 T 23-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 SUPERFAMILY SSF51735 1 195 5.17E-58 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 SMART SM00984 320 424 1.6E-51 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 1.8E-37 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 Gene3D G3DSA:1.20.5.100 203 234 5.1E-19 T 23-10-2018 DLM_2804 41e710df910d5b6521ce08e6c07ab8eb 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 8.4E-66 T 23-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_4368 b25a8dc0647610148124b2f8884a8804 454 Gene3D G3DSA:3.30.830.10 22 242 1.4E-79 T 23-10-2018 DLM_4368 b25a8dc0647610148124b2f8884a8804 454 Pfam PF00675 Insulinase (Peptidase family M16) 36 181 5.5E-28 T 23-10-2018 IPR011765 Peptidase M16, N-terminal DLM_4368 b25a8dc0647610148124b2f8884a8804 454 SUPERFAMILY SSF63411 26 229 8.43E-59 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DLM_4368 b25a8dc0647610148124b2f8884a8804 454 Gene3D G3DSA:3.30.830.10 244 435 8.6E-39 T 23-10-2018 DLM_4368 b25a8dc0647610148124b2f8884a8804 454 Pfam PF05193 Peptidase M16 inactive domain 192 371 6.6E-27 T 23-10-2018 IPR007863 Peptidase M16, C-terminal DLM_4368 b25a8dc0647610148124b2f8884a8804 454 SUPERFAMILY SSF63411 251 438 2.23E-27 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DLM_4368 b25a8dc0647610148124b2f8884a8804 454 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 56 79 - T 23-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DLM_0797 dcbf3cb7270babc57940ade135fe76e6 663 Gene3D G3DSA:2.60.40.10 192 265 1.2E-6 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3284 09e6984c8007090d8c4a65dd264c1bd7 254 SUPERFAMILY SSF75217 12 169 1.57E-34 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases DLM_3284 09e6984c8007090d8c4a65dd264c1bd7 254 PIRSF PIRSF004808 8 250 9.9E-80 T 23-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 DLM_3284 09e6984c8007090d8c4a65dd264c1bd7 254 Gene3D G3DSA:1.10.8.590 172 252 1.0E-20 T 23-10-2018 DLM_3284 09e6984c8007090d8c4a65dd264c1bd7 254 Gene3D G3DSA:3.40.1280.10 9 171 2.9E-60 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DLM_3284 09e6984c8007090d8c4a65dd264c1bd7 254 Pfam PF00588 SpoU rRNA Methylase family 13 163 9.5E-36 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DLM_3284 09e6984c8007090d8c4a65dd264c1bd7 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 10 244 4.5E-65 T 23-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 DLM_4302 e207700017899b3245b7e5a22ac16dc3 128 Gene3D G3DSA:1.10.3830.10 10 128 7.1E-35 T 23-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DLM_4302 e207700017899b3245b7e5a22ac16dc3 128 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 78 89 - T 23-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DLM_4302 e207700017899b3245b7e5a22ac16dc3 128 Pfam PF01219 Prokaryotic diacylglycerol kinase 23 125 9.0E-30 T 23-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Gene3D G3DSA:3.40.50.2300 733 863 1.7E-15 T 23-10-2018 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SUPERFAMILY SSF55785 107 221 2.62E-5 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Pfam PF08448 PAS fold 342 450 4.7E-17 T 23-10-2018 IPR013656 PAS fold-4 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Pfam PF00072 Response regulator receiver domain 740 852 1.6E-9 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SMART SM00091 335 401 0.0045 T 23-10-2018 IPR000014 PAS domain DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SMART SM00091 96 164 9.6 T 23-10-2018 IPR000014 PAS domain DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SMART SM00091 229 298 7.2 T 23-10-2018 IPR000014 PAS domain DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Pfam PF00512 His Kinase A (phospho-acceptor) domain 493 558 4.9E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SMART SM00388 493 558 2.0E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Gene3D G3DSA:1.10.287.130 462 556 4.4E-15 T 23-10-2018 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SUPERFAMILY SSF55785 320 446 8.9E-20 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 607 711 2.1E-14 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SMART SM00448 738 852 7.2E-9 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SUPERFAMILY SSF55874 547 715 6.94E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 652 3.5E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 666 3.5E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 691 3.5E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 710 3.5E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Gene3D G3DSA:3.30.565.10 557 714 2.3E-28 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Gene3D G3DSA:3.30.450.20 220 328 1.4E-8 T 23-10-2018 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Gene3D G3DSA:3.30.450.20 83 217 1.4E-6 T 23-10-2018 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SMART SM00387 602 713 5.9E-21 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Pfam PF12860 PAS fold 290 327 9.5E-7 T 23-10-2018 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Pfam PF12860 PAS fold 235 273 1.1E-8 T 23-10-2018 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Pfam PF12860 PAS fold 102 217 4.6E-18 T 23-10-2018 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SUPERFAMILY SSF47384 479 558 4.71E-13 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SUPERFAMILY SSF52172 736 857 1.85E-18 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 331 455 9.5E-9 T 23-10-2018 IPR000014 PAS domain DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 SUPERFAMILY SSF55785 208 268 1.62E-8 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2380 3593ff0236b20456d70f6bbdd1b64ace 864 Gene3D G3DSA:3.30.450.20 333 461 2.8E-26 T 23-10-2018 DLM_0519 e9173cbf983f71c9425da71d29191196 478 Gene3D G3DSA:1.20.1720.10 13 221 8.6E-43 T 23-10-2018 DLM_0519 e9173cbf983f71c9425da71d29191196 478 SUPERFAMILY SSF103473 8 457 1.44E-55 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0519 e9173cbf983f71c9425da71d29191196 478 Pfam PF07690 Major Facilitator Superfamily 17 409 9.8E-44 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_0519 e9173cbf983f71c9425da71d29191196 478 Gene3D G3DSA:1.20.1250.20 269 465 2.1E-16 T 23-10-2018 DLM_3454 8f57636d74128b0587e39db3499df211 345 Gene3D G3DSA:3.40.50.2000 183 322 4.6E-23 T 23-10-2018 DLM_3454 8f57636d74128b0587e39db3499df211 345 Gene3D G3DSA:3.40.50.2000 1 182 2.1E-21 T 23-10-2018 DLM_3454 8f57636d74128b0587e39db3499df211 345 Pfam PF13692 Glycosyl transferases group 1 181 300 1.2E-20 T 23-10-2018 DLM_3454 8f57636d74128b0587e39db3499df211 345 SUPERFAMILY SSF53756 1 329 1.94E-70 T 23-10-2018 DLM_3454 8f57636d74128b0587e39db3499df211 345 Pfam PF13439 Glycosyltransferase Family 4 14 165 6.9E-18 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 23-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 Gene3D G3DSA:1.10.1390.10 507 549 1.4E-18 T 23-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 267 280 - T 23-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 Pfam PF00342 Phosphoglucose isomerase 54 542 1.7E-209 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 Gene3D G3DSA:3.40.50.10490 15 506 3.4E-223 T 23-10-2018 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 Gene3D G3DSA:3.40.50.10490 100 293 3.4E-223 T 23-10-2018 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 48 524 41.594 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 263 281 2.5E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.5E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 340 361 2.5E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.5E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.5E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 152 171 2.5E-56 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_1984 0d05d90486e04b00711b3f42caf16a73 550 SUPERFAMILY SSF53697 10 548 7.41E-212 T 23-10-2018 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 ProSitePatterns PS01135 FtsZ protein signature 2. 101 122 - T 23-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 SMART SM00864 17 208 2.3E-113 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 SUPERFAMILY SSF52490 17 211 2.62E-66 T 23-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 SUPERFAMILY SSF55307 207 325 3.43E-38 T 23-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 176 3.2E-38 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 Gene3D G3DSA:3.40.50.1440 14 322 4.1E-111 T 23-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 13 341 36.72 T 23-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 ProSitePatterns PS01134 FtsZ protein signature 1. 48 82 - T 23-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 SMART SM00865 210 330 5.2E-54 T 23-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 PRINTS PR00423 Cell division protein FtsZ signature 130 151 4.0E-45 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 PRINTS PR00423 Cell division protein FtsZ signature 192 214 4.0E-45 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 PRINTS PR00423 Cell division protein FtsZ signature 102 122 4.0E-45 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 PRINTS PR00423 Cell division protein FtsZ signature 215 236 4.0E-45 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 Pfam PF12327 FtsZ family, C-terminal domain 225 321 6.6E-24 T 23-10-2018 IPR024757 Cell division protein FtsZ, C-terminal DLM_4202 3be1a6ab892ecf5db3baa4da3df21cd5 394 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 333 5.4E-124 T 23-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DLM_3230 41b33482e9e1ea1ceb5066cac22575c9 424 Pfam PF14031 Putative serine dehydratase domain 311 410 1.3E-15 T 23-10-2018 IPR026956 D-serine dehydratase-like domain DLM_3230 41b33482e9e1ea1ceb5066cac22575c9 424 Gene3D G3DSA:2.40.37.20 33 424 9.5E-146 T 23-10-2018 DLM_3230 41b33482e9e1ea1ceb5066cac22575c9 424 Gene3D G3DSA:3.20.20.10 52 285 9.5E-146 T 23-10-2018 IPR029066 PLP-binding barrel DLM_3230 41b33482e9e1ea1ceb5066cac22575c9 424 Pfam PF01168 Alanine racemase, N-terminal domain 51 253 1.7E-12 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_3230 41b33482e9e1ea1ceb5066cac22575c9 424 SMART SM01119 311 411 5.3E-36 T 23-10-2018 IPR026956 D-serine dehydratase-like domain DLM_3230 41b33482e9e1ea1ceb5066cac22575c9 424 SUPERFAMILY SSF51419 52 285 1.42E-26 T 23-10-2018 IPR029066 PLP-binding barrel DLM_0755 1efcbc945b82ffaecdacb9e46ab7f5db 205 Pfam PF00925 GTP cyclohydrolase II 16 179 1.1E-66 T 23-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DLM_0755 1efcbc945b82ffaecdacb9e46ab7f5db 205 SUPERFAMILY SSF142695 11 182 1.31E-65 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DLM_0755 1efcbc945b82ffaecdacb9e46ab7f5db 205 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 10 205 45.519 T 23-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DLM_0755 1efcbc945b82ffaecdacb9e46ab7f5db 205 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 15 203 3.5E-84 T 23-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DLM_0755 1efcbc945b82ffaecdacb9e46ab7f5db 205 Gene3D G3DSA:3.40.50.10990 11 183 2.9E-74 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DLM_1558 8bd0960965b26d7e766267c3ef9603f3 382 Gene3D G3DSA:3.40.50.2300 154 282 3.7E-96 T 23-10-2018 DLM_1558 8bd0960965b26d7e766267c3ef9603f3 382 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 34 50 2.0E-7 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_1558 8bd0960965b26d7e766267c3ef9603f3 382 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 56 72 2.0E-7 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_1558 8bd0960965b26d7e766267c3ef9603f3 382 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 264 282 2.0E-7 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_1558 8bd0960965b26d7e766267c3ef9603f3 382 Pfam PF13458 Periplasmic binding protein 34 371 1.5E-60 T 23-10-2018 IPR028081 Leucine-binding protein domain DLM_1558 8bd0960965b26d7e766267c3ef9603f3 382 SUPERFAMILY SSF53822 34 377 3.3E-91 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1558 8bd0960965b26d7e766267c3ef9603f3 382 Gene3D G3DSA:3.40.50.2300 35 350 3.7E-96 T 23-10-2018 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 Gene3D G3DSA:1.10.580.10 36 362 2.6E-125 T 23-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 382 6.7E-156 T 23-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 Pfam PF00285 Citrate synthase, C-terminal domain 16 364 6.4E-113 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 PIRSF PIRSF001369 8 382 8.0E-111 T 23-10-2018 IPR024176 Citrate synthase, bacterial-type DLM_1435 0701681a10ff49566ce85655fe780b7d 382 ProSitePatterns PS00480 Citrate synthase signature. 265 277 - T 23-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 SUPERFAMILY SSF48256 16 376 1.83E-123 T 23-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 Gene3D G3DSA:1.10.230.10 231 329 2.6E-125 T 23-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DLM_1435 0701681a10ff49566ce85655fe780b7d 382 PRINTS PR00143 Citrate synthase signature 183 198 1.3E-35 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 PRINTS PR00143 Citrate synthase signature 335 349 1.3E-35 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 PRINTS PR00143 Citrate synthase signature 205 233 1.3E-35 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 PRINTS PR00143 Citrate synthase signature 258 278 1.3E-35 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 PRINTS PR00143 Citrate synthase signature 133 146 1.3E-35 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_1435 0701681a10ff49566ce85655fe780b7d 382 PRINTS PR00143 Citrate synthase signature 315 331 1.3E-35 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 SMART SM00344 3 112 5.0E-41 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 SUPERFAMILY SSF54909 65 148 2.41E-18 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 SUPERFAMILY SSF46785 3 92 2.09E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 23-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 Gene3D G3DSA:1.10.10.10 4 54 1.4E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.7E-20 T 23-10-2018 DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.6E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.6E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.6E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 Gene3D G3DSA:3.30.70.920 56 152 9.6E-21 T 23-10-2018 DLM_2503 8d2c41ef168c3279ff3bebc0a50ec33f 153 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 5.9E-20 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 Pfam PF03129 Anticodon binding domain 331 419 3.4E-12 T 23-10-2018 IPR004154 Anticodon-binding DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 SUPERFAMILY SSF52954 328 419 1.1E-22 T 23-10-2018 DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 423 33.092 T 23-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 Gene3D G3DSA:3.40.50.800 327 422 1.9E-26 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 PIRSF PIRSF001549 1 421 3.5E-115 T 23-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 SUPERFAMILY SSF55681 5 320 4.18E-97 T 23-10-2018 DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 6.3E-152 T 23-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 Gene3D G3DSA:3.30.930.10 2 326 3.8E-115 T 23-10-2018 DLM_0570 ac8c0a675c00b0c87085529c4bf12627 423 Pfam PF13393 Histidyl-tRNA synthetase 10 313 1.9E-40 T 23-10-2018 DLM_4522 b895e44d2d69f2abf2161b69d858a645 214 Pfam PF16859 Bacterial transcriptional repressor C-terminal 88 180 1.9E-10 T 23-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DLM_4522 b895e44d2d69f2abf2161b69d858a645 214 Gene3D G3DSA:1.10.357.10 67 214 4.2E-19 T 23-10-2018 DLM_4522 b895e44d2d69f2abf2161b69d858a645 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.0E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_4522 b895e44d2d69f2abf2161b69d858a645 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.0E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_4522 b895e44d2d69f2abf2161b69d858a645 214 SUPERFAMILY SSF48498 88 212 3.44E-19 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_4522 b895e44d2d69f2abf2161b69d858a645 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.6E-18 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_4522 b895e44d2d69f2abf2161b69d858a645 214 SUPERFAMILY SSF46689 8 88 4.59E-20 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_4522 b895e44d2d69f2abf2161b69d858a645 214 Gene3D G3DSA:1.10.10.60 3 66 1.4E-20 T 23-10-2018 DLM_1946 6001f441058c4798ed9b7872ea4d483d 573 Gene3D G3DSA:3.20.70.20 40 566 3.3E-102 T 23-10-2018 DLM_1946 6001f441058c4798ed9b7872ea4d483d 573 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 27 559 4.6E-130 T 23-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 DLM_1946 6001f441058c4798ed9b7872ea4d483d 573 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 27 558 5.3E-162 T 23-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 DLM_1946 6001f441058c4798ed9b7872ea4d483d 573 SUPERFAMILY SSF51998 27 559 3.36E-149 T 23-10-2018 DLM_3898 d61d4ae51206af45ba7aaa69082ebf06 199 SUPERFAMILY SSF50800 6 196 1.83E-48 T 23-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DLM_3898 d61d4ae51206af45ba7aaa69082ebf06 199 Gene3D G3DSA:2.40.33.20 3 199 6.8E-56 T 23-10-2018 DLM_3898 d61d4ae51206af45ba7aaa69082ebf06 199 Pfam PF03473 MOSC domain 57 175 7.4E-18 T 23-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DLM_3010 7c965f0ba5217c868e37967bdae27302 445 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 2 433 7.3E-57 T 23-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3010 7c965f0ba5217c868e37967bdae27302 445 Gene3D G3DSA:3.90.660.20 37 386 4.6E-99 T 23-10-2018 DLM_3010 7c965f0ba5217c868e37967bdae27302 445 Pfam PF01593 Flavin containing amine oxidoreductase 9 421 3.7E-43 T 23-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DLM_3010 7c965f0ba5217c868e37967bdae27302 445 Gene3D G3DSA:3.50.50.60 2 427 4.6E-99 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3010 7c965f0ba5217c868e37967bdae27302 445 SUPERFAMILY SSF54373 279 386 2.16E-18 T 23-10-2018 DLM_3010 7c965f0ba5217c868e37967bdae27302 445 Gene3D G3DSA:1.10.3110.10 93 192 4.6E-99 T 23-10-2018 DLM_3010 7c965f0ba5217c868e37967bdae27302 445 SUPERFAMILY SSF51905 2 430 1.17E-47 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3010 7c965f0ba5217c868e37967bdae27302 445 PRINTS PR00419 Adrenodoxin reductase family signature 1 22 5.0E-5 T 23-10-2018 DLM_3010 7c965f0ba5217c868e37967bdae27302 445 PRINTS PR00419 Adrenodoxin reductase family signature 24 37 5.0E-5 T 23-10-2018 DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 Pfam PF01464 Transglycosylase SLT domain 100 203 8.2E-25 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 Gene3D G3DSA:1.10.530.10 89 240 2.4E-31 T 23-10-2018 DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 Pfam PF01476 LysM domain 531 572 3.2E-12 T 23-10-2018 IPR018392 LysM domain DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 Pfam PF01476 LysM domain 329 361 0.078 T 23-10-2018 IPR018392 LysM domain DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 Pfam PF01476 LysM domain 615 657 1.2E-11 T 23-10-2018 IPR018392 LysM domain DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 Gene3D G3DSA:3.10.350.10 614 657 5.1E-13 T 23-10-2018 IPR036779 LysM domain superfamily DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 Gene3D G3DSA:3.10.350.10 527 577 4.8E-16 T 23-10-2018 IPR036779 LysM domain superfamily DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 SMART SM00257 530 573 5.9E-15 T 23-10-2018 IPR018392 LysM domain DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 SMART SM00257 614 658 3.4E-10 T 23-10-2018 IPR018392 LysM domain DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 SMART SM00257 323 366 0.7 T 23-10-2018 IPR018392 LysM domain DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 SUPERFAMILY SSF54106 614 657 3.4E-10 T 23-10-2018 DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 SUPERFAMILY SSF53955 93 252 5.18E-41 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 SUPERFAMILY SSF54106 530 572 2.09E-10 T 23-10-2018 DLM_0434 a710bd6559040cfabe29f0127c2ed6fc 662 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 114 142 - T 23-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DLM_0736 da36b57cf83f73de7bd815f9bf2a4b2e 338 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0736 da36b57cf83f73de7bd815f9bf2a4b2e 338 Pfam PF00005 ABC transporter 21 162 3.3E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0736 da36b57cf83f73de7bd815f9bf2a4b2e 338 Gene3D G3DSA:3.40.50.300 3 270 2.9E-72 T 23-10-2018 DLM_0736 da36b57cf83f73de7bd815f9bf2a4b2e 338 SUPERFAMILY SSF52540 5 241 3.28E-83 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0736 da36b57cf83f73de7bd815f9bf2a4b2e 338 Pfam PF08402 TOBE domain 257 336 1.5E-12 T 23-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DLM_0736 da36b57cf83f73de7bd815f9bf2a4b2e 338 SMART SM00382 29 212 8.0E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0736 da36b57cf83f73de7bd815f9bf2a4b2e 338 SUPERFAMILY SSF50331 234 335 5.16E-9 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 SMART SM00283 393 654 9.8E-57 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 2.2E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 549 2.2E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 518 2.2E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 621 4.0E-39 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 SMART SM00304 385 438 29.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 SMART SM00304 325 378 2.6E-4 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 SMART SM00304 486 532 85.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 Pfam PF08376 Nitrate and nitrite sensing 56 287 1.8E-37 T 23-10-2018 IPR013587 Nitrate/nitrite sensing protein DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 Gene3D G3DSA:1.10.287.950 325 655 9.7E-66 T 23-10-2018 DLM_2732 ae5ca0e746497fcdcb145e7b4e5148b0 658 SUPERFAMILY SSF58104 346 655 3.66E-66 T 23-10-2018 DLM_3440 904f0b61f9afe4fe8380ced707da5cb5 170 Gene3D G3DSA:2.60.120.10 29 144 7.3E-32 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_3440 904f0b61f9afe4fe8380ced707da5cb5 170 SUPERFAMILY SSF51182 36 134 4.01E-22 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_3440 904f0b61f9afe4fe8380ced707da5cb5 170 Pfam PF07883 Cupin domain 48 118 1.7E-17 T 23-10-2018 IPR013096 Cupin 2, conserved barrel DLM_2740 3b0507cc075dbdc04d85b82f1642c31f 316 Gene3D G3DSA:3.40.50.1980 32 122 1.2E-22 T 23-10-2018 DLM_2740 3b0507cc075dbdc04d85b82f1642c31f 316 SUPERFAMILY SSF53807 35 294 1.33E-42 T 23-10-2018 DLM_2740 3b0507cc075dbdc04d85b82f1642c31f 316 Pfam PF01497 Periplasmic binding protein 38 267 1.1E-16 T 23-10-2018 IPR002491 ABC transporter periplasmic binding domain DLM_2740 3b0507cc075dbdc04d85b82f1642c31f 316 Gene3D G3DSA:3.40.50.1980 124 296 5.0E-39 T 23-10-2018 DLM_2740 3b0507cc075dbdc04d85b82f1642c31f 316 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 2.0E-9 T 23-10-2018 DLM_2740 3b0507cc075dbdc04d85b82f1642c31f 316 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 2.0E-9 T 23-10-2018 DLM_2740 3b0507cc075dbdc04d85b82f1642c31f 316 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 2.0E-9 T 23-10-2018 DLM_3926 bd8abd8996cec7de0ab4022320464d57 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 140 156 - T 23-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 DLM_3926 bd8abd8996cec7de0ab4022320464d57 510 Gene3D G3DSA:1.20.200.10 199 509 6.0E-124 T 23-10-2018 DLM_3926 bd8abd8996cec7de0ab4022320464d57 510 SUPERFAMILY SSF48557 6 502 2.2E-192 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 DLM_3926 bd8abd8996cec7de0ab4022320464d57 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 507 1.6E-211 T 23-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3926 bd8abd8996cec7de0ab4022320464d57 510 Gene3D G3DSA:1.10.275.10 3 198 3.4E-68 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal DLM_3926 bd8abd8996cec7de0ab4022320464d57 510 Pfam PF00221 Aromatic amino acid lyase 11 470 1.1E-188 T 23-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 DLM_3926 bd8abd8996cec7de0ab4022320464d57 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.523 T 23-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_4551 ecfe133a1ff43b3fb0723de3f32cd44b 241 Gene3D G3DSA:3.40.50.1580 1 241 1.1E-75 T 23-10-2018 DLM_4551 ecfe133a1ff43b3fb0723de3f32cd44b 241 SUPERFAMILY SSF53167 1 230 5.89E-77 T 23-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DLM_4551 ecfe133a1ff43b3fb0723de3f32cd44b 241 Pfam PF01048 Phosphorylase superfamily 2 240 5.4E-47 T 23-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DLM_4551 ecfe133a1ff43b3fb0723de3f32cd44b 241 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 241 30.739 T 23-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 DLM_2284 8076ff0058deba1acd14a4e370bbab32 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 5.1E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2284 8076ff0058deba1acd14a4e370bbab32 196 Gene3D G3DSA:1.10.357.10 2 196 1.7E-57 T 23-10-2018 DLM_2284 8076ff0058deba1acd14a4e370bbab32 196 Pfam PF08359 YsiA-like protein, C-terminal region 74 194 2.2E-5 T 23-10-2018 IPR013570 Transcription regulator YsiA, C-terminal DLM_2284 8076ff0058deba1acd14a4e370bbab32 196 SUPERFAMILY SSF48498 86 194 1.26E-18 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_2284 8076ff0058deba1acd14a4e370bbab32 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 62 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DLM_2284 8076ff0058deba1acd14a4e370bbab32 196 SUPERFAMILY SSF46689 11 91 1.08E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2284 8076ff0058deba1acd14a4e370bbab32 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.4E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2284 8076ff0058deba1acd14a4e370bbab32 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.4E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1250 dbd0bb96f24f69df490cfa1591101eee 117 SUPERFAMILY SSF160719 19 113 8.76E-6 T 23-10-2018 DLM_1250 dbd0bb96f24f69df490cfa1591101eee 117 Pfam PF07409 Phage protein GP46 38 109 4.2E-15 T 23-10-2018 IPR010877 Bacteriophage Mu, Gp46 DLM_2463 dffc59e6b49a6b4e32ac9244a32da410 354 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 350 3.7E-134 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_2463 dffc59e6b49a6b4e32ac9244a32da410 354 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DLM_2463 dffc59e6b49a6b4e32ac9244a32da410 354 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 349 1.1E-152 T 23-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DLM_2463 dffc59e6b49a6b4e32ac9244a32da410 354 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 354 51.629 T 23-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DLM_2463 dffc59e6b49a6b4e32ac9244a32da410 354 SUPERFAMILY SSF53659 1 354 6.34E-122 T 23-10-2018 DLM_2463 dffc59e6b49a6b4e32ac9244a32da410 354 Gene3D G3DSA:3.40.718.10 1 354 1.6E-149 T 23-10-2018 DLM_2463 dffc59e6b49a6b4e32ac9244a32da410 354 SMART SM01329 2 350 1.5E-206 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 Gene3D G3DSA:3.30.360.10 139 349 9.8E-78 T 23-10-2018 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 SUPERFAMILY SSF51735 1 147 1.18E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 366 31.85 T 23-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 366 4.5E-203 T 23-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 SMART SM00859 2 122 2.6E-29 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 PIRSF PIRSF000148 1 368 1.4E-62 T 23-10-2018 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 6.5E-23 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 SUPERFAMILY SSF55347 134 353 6.25E-72 T 23-10-2018 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 260 274 - T 23-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 Gene3D G3DSA:3.40.50.720 1 138 5.0E-58 T 23-10-2018 DLM_2462 e686904c381d977116c9d32f1ed4d86a 368 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 352 2.4E-49 T 23-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_0732 82e115ee7f55bfaf82cf44815335c110 1037 SMART SM00316 37 117 2.4E-10 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_0732 82e115ee7f55bfaf82cf44815335c110 1037 Hamap MF_00970 Ribonuclease E [rne]. 1 992 34.966 T 23-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 DLM_0732 82e115ee7f55bfaf82cf44815335c110 1037 Gene3D G3DSA:3.40.1260.20 398 508 3.0E-37 T 23-10-2018 DLM_0732 82e115ee7f55bfaf82cf44815335c110 1037 Gene3D G3DSA:2.40.50.140 31 123 7.4E-32 T 23-10-2018 DLM_0732 82e115ee7f55bfaf82cf44815335c110 1037 SUPERFAMILY SSF50249 39 123 1.96E-17 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0732 82e115ee7f55bfaf82cf44815335c110 1037 Pfam PF00575 S1 RNA binding domain 36 116 7.0E-10 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_0732 82e115ee7f55bfaf82cf44815335c110 1037 Pfam PF10150 Ribonuclease E/G family 119 388 5.2E-95 T 23-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DLM_0732 82e115ee7f55bfaf82cf44815335c110 1037 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 2.1E-161 T 23-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DLM_2826 017552498fffea1fbfd2a67710a7075b 200 SUPERFAMILY SSF47413 22 85 7.32E-16 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_2826 017552498fffea1fbfd2a67710a7075b 200 SUPERFAMILY SSF51182 76 197 9.7E-24 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2826 017552498fffea1fbfd2a67710a7075b 200 Gene3D G3DSA:1.10.260.40 23 99 1.7E-16 T 23-10-2018 DLM_2826 017552498fffea1fbfd2a67710a7075b 200 SMART SM00530 27 82 9.0E-11 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2826 017552498fffea1fbfd2a67710a7075b 200 Pfam PF07883 Cupin domain 126 196 1.5E-14 T 23-10-2018 IPR013096 Cupin 2, conserved barrel DLM_2826 017552498fffea1fbfd2a67710a7075b 200 Pfam PF13560 Helix-turn-helix domain 24 78 3.5E-12 T 23-10-2018 DLM_2826 017552498fffea1fbfd2a67710a7075b 200 Gene3D G3DSA:2.60.120.10 113 199 7.9E-16 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_3397 ad12e8fa52787c77b365333485728004 260 SMART SM00062 31 251 6.9E-75 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3397 ad12e8fa52787c77b365333485728004 260 Gene3D G3DSA:3.40.190.10 115 213 2.7E-71 T 23-10-2018 DLM_3397 ad12e8fa52787c77b365333485728004 260 Gene3D G3DSA:3.40.190.10 29 248 2.7E-71 T 23-10-2018 DLM_3397 ad12e8fa52787c77b365333485728004 260 SMART SM00079 31 250 2.8E-4 T 23-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DLM_3397 ad12e8fa52787c77b365333485728004 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 54 67 - T 23-10-2018 IPR018313 Solute-binding protein family 3, conserved site DLM_3397 ad12e8fa52787c77b365333485728004 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 249 1.4E-68 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3397 ad12e8fa52787c77b365333485728004 260 SUPERFAMILY SSF53850 2 251 4.84E-74 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 SMART SM00433 34 648 1.4E-192 T 23-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 23-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 SUPERFAMILY SSF54211 223 397 8.35E-39 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 Pfam PF01751 Toprim domain 423 537 5.7E-12 T 23-10-2018 IPR006171 TOPRIM domain DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 649 7.0E-220 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 173 4.2E-15 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 584 600 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 531 543 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 511 528 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 276 289 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 424 438 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 493 509 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR00418 DNA topoisomerase II family signature 112 126 1.3E-58 T 23-10-2018 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 652 44.503 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 152 167 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 177 194 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 372 397 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 348 371 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 138 152 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 458 479 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 304 320 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 321 336 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 3.7E-46 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 581 644 3.6E-23 T 23-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 SUPERFAMILY SSF56719 398 645 4.45E-74 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 Gene3D G3DSA:3.30.230.10 221 399 2.0E-47 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 Pfam PF00204 DNA gyrase B 223 395 5.5E-38 T 23-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 SUPERFAMILY SSF55874 4 209 2.23E-61 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 Gene3D G3DSA:3.40.50.670 400 647 3.1E-81 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 Gene3D G3DSA:3.30.565.10 2 215 2.3E-68 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3196 eca582305b2a7a8a0dff8765abb8000a 654 SMART SM00387 27 176 5.0E-15 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4073 af3781f8452a5494377c0685bceabe64 465 Gene3D G3DSA:3.50.50.60 31 394 4.6E-60 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4073 af3781f8452a5494377c0685bceabe64 465 Gene3D G3DSA:3.30.9.10 125 354 4.6E-60 T 23-10-2018 DLM_4073 af3781f8452a5494377c0685bceabe64 465 SUPERFAMILY SSF51905 20 307 1.55E-37 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4073 af3781f8452a5494377c0685bceabe64 465 Pfam PF01266 FAD dependent oxidoreductase 31 393 1.2E-47 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 Pfam PF05954 Phage late control gene D protein (GPD) 26 344 8.2E-58 T 23-10-2018 DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 SUPERFAMILY SSF69255 368 456 1.33E-21 T 23-10-2018 DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 503 1.8E-79 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 SUPERFAMILY SSF69279 7 199 9.78E-39 T 23-10-2018 DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 Gene3D G3DSA:2.30.110.50 20 344 5.3E-50 T 23-10-2018 DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 Gene3D G3DSA:3.30.1920.30 238 302 5.3E-50 T 23-10-2018 DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 477 579 2.9E-37 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 Gene3D G3DSA:2.40.50.230 374 458 9.9E-27 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 502 3.4E-71 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 Gene3D G3DSA:3.55.50.10 111 204 5.3E-50 T 23-10-2018 DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 597 727 8.7E-34 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_3474 b4c57b5334798dae8be9ae48480c67af 763 SUPERFAMILY SSF69279 204 369 6.97E-35 T 23-10-2018 DLM_3765 120c2420250156614c873486a305d308 1056 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 507 624 5.3E-22 T 23-10-2018 IPR000014 PAS domain DLM_3765 120c2420250156614c873486a305d308 1056 Gene3D G3DSA:3.30.450.20 77 223 1.5E-34 T 23-10-2018 DLM_3765 120c2420250156614c873486a305d308 1056 SUPERFAMILY SSF55785 404 496 1.57E-7 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3765 120c2420250156614c873486a305d308 1056 Pfam PF00990 Diguanylate cyclase, GGDEF domain 629 786 1.1E-49 T 23-10-2018 IPR000160 GGDEF domain DLM_3765 120c2420250156614c873486a305d308 1056 SMART SM00052 800 1046 5.5E-124 T 23-10-2018 IPR001633 EAL domain DLM_3765 120c2420250156614c873486a305d308 1056 SUPERFAMILY SSF55073 634 791 6.67E-53 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3765 120c2420250156614c873486a305d308 1056 Gene3D G3DSA:3.30.70.270 635 801 1.6E-61 T 23-10-2018 DLM_3765 120c2420250156614c873486a305d308 1056 Pfam PF00563 EAL domain 806 1041 1.5E-75 T 23-10-2018 IPR001633 EAL domain DLM_3765 120c2420250156614c873486a305d308 1056 SUPERFAMILY SSF141868 805 1050 3.27E-91 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3765 120c2420250156614c873486a305d308 1056 SMART SM00086 576 618 4.7E-5 T 23-10-2018 IPR001610 PAC motif DLM_3765 120c2420250156614c873486a305d308 1056 SMART SM00086 457 496 32.0 T 23-10-2018 IPR001610 PAC motif DLM_3765 120c2420250156614c873486a305d308 1056 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 626 788 2.2E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_3765 120c2420250156614c873486a305d308 1056 SMART SM01049 73 167 5.3E-19 T 23-10-2018 IPR033480 Single Cache domain 2 DLM_3765 120c2420250156614c873486a305d308 1056 Pfam PF13426 PAS domain 515 617 1.5E-19 T 23-10-2018 IPR000014 PAS domain DLM_3765 120c2420250156614c873486a305d308 1056 Gene3D G3DSA:3.30.450.20 499 634 2.2E-39 T 23-10-2018 DLM_3765 120c2420250156614c873486a305d308 1056 SUPERFAMILY SSF55785 509 616 3.49E-29 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3765 120c2420250156614c873486a305d308 1056 SMART SM00091 504 570 1.5E-8 T 23-10-2018 IPR000014 PAS domain DLM_3765 120c2420250156614c873486a305d308 1056 SMART SM00091 399 463 51.0 T 23-10-2018 IPR000014 PAS domain DLM_3765 120c2420250156614c873486a305d308 1056 Gene3D G3DSA:3.20.20.450 802 1054 4.6E-104 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3765 120c2420250156614c873486a305d308 1056 Pfam PF08269 Cache domain 38 329 4.6E-59 T 23-10-2018 IPR004010 Double Cache domain 2 DLM_3765 120c2420250156614c873486a305d308 1056 Gene3D G3DSA:3.30.450.20 224 335 2.8E-10 T 23-10-2018 DLM_3765 120c2420250156614c873486a305d308 1056 SMART SM00267 618 790 4.1E-68 T 23-10-2018 IPR000160 GGDEF domain DLM_3765 120c2420250156614c873486a305d308 1056 Gene3D G3DSA:3.30.450.20 389 494 2.0E-5 T 23-10-2018 DLM_0312 7423caf43455e19042af6aab711a5049 299 SUPERFAMILY SSF53850 90 288 6.15E-26 T 23-10-2018 DLM_0312 7423caf43455e19042af6aab711a5049 299 Pfam PF03466 LysR substrate binding domain 90 287 7.6E-24 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0312 7423caf43455e19042af6aab711a5049 299 Gene3D G3DSA:1.10.10.10 2 90 1.6E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0312 7423caf43455e19042af6aab711a5049 299 SUPERFAMILY SSF46785 2 84 9.02E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0312 7423caf43455e19042af6aab711a5049 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.0E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0312 7423caf43455e19042af6aab711a5049 299 Gene3D G3DSA:3.40.190.290 97 288 5.9E-13 T 23-10-2018 DLM_1149 81d030c7332e6053b0b4fd003e33f9f3 291 SUPERFAMILY SSF56349 2 280 1.09E-52 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DLM_1149 81d030c7332e6053b0b4fd003e33f9f3 291 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 289 2.8E-105 T 23-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 DLM_1149 81d030c7332e6053b0b4fd003e33f9f3 291 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 287 57.377 T 23-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DLM_1149 81d030c7332e6053b0b4fd003e33f9f3 291 Gene3D G3DSA:1.10.443.10 106 281 3.4E-56 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DLM_1149 81d030c7332e6053b0b4fd003e33f9f3 291 Pfam PF00589 Phage integrase family 113 273 1.7E-46 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DLM_1149 81d030c7332e6053b0b4fd003e33f9f3 291 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 84 1.3E-14 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DLM_1149 81d030c7332e6053b0b4fd003e33f9f3 291 Gene3D G3DSA:1.10.150.130 2 92 8.6E-16 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal DLM_0228 de46358d63e77924ed120ba1701489cf 81 SMART SM00704 10 47 9.6E-13 T 23-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 DLM_0228 de46358d63e77924ed120ba1701489cf 81 SMART SM00704 48 81 0.025 T 23-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 DLM_0228 de46358d63e77924ed120ba1701489cf 81 Gene3D G3DSA:3.40.5.90 1 80 5.3E-30 T 23-10-2018 DLM_0228 de46358d63e77924ed120ba1701489cf 81 Pfam PF09360 Iron-binding zinc finger CDGSH type 55 77 8.3E-7 T 23-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 DLM_0228 de46358d63e77924ed120ba1701489cf 81 Pfam PF09360 Iron-binding zinc finger CDGSH type 16 41 2.3E-10 T 23-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 DLM_2187 828c453902f5351e07dfa5a20c323106 461 Gene3D G3DSA:1.10.40.30 409 461 2.4E-22 T 23-10-2018 DLM_2187 828c453902f5351e07dfa5a20c323106 461 Pfam PF00206 Lyase 13 343 2.8E-107 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal DLM_2187 828c453902f5351e07dfa5a20c323106 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 461 82.2 T 23-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_2187 828c453902f5351e07dfa5a20c323106 461 Gene3D G3DSA:1.20.200.10 140 408 1.0E-115 T 23-10-2018 DLM_2187 828c453902f5351e07dfa5a20c323106 461 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 6 461 5.0E-217 T 23-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_2187 828c453902f5351e07dfa5a20c323106 461 Pfam PF10415 Fumarase C C-terminus 409 461 2.0E-20 T 23-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_2187 828c453902f5351e07dfa5a20c323106 461 SUPERFAMILY SSF48557 6 460 1.05E-151 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 DLM_2187 828c453902f5351e07dfa5a20c323106 461 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DLM_2187 828c453902f5351e07dfa5a20c323106 461 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 7.6E-34 T 23-10-2018 IPR000362 Fumarate lyase family DLM_2187 828c453902f5351e07dfa5a20c323106 461 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 7.6E-34 T 23-10-2018 IPR000362 Fumarate lyase family DLM_2187 828c453902f5351e07dfa5a20c323106 461 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 7.6E-34 T 23-10-2018 IPR000362 Fumarate lyase family DLM_2187 828c453902f5351e07dfa5a20c323106 461 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 7.6E-34 T 23-10-2018 IPR000362 Fumarate lyase family DLM_2187 828c453902f5351e07dfa5a20c323106 461 Gene3D G3DSA:1.10.275.10 6 139 2.6E-51 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal DLM_2187 828c453902f5351e07dfa5a20c323106 461 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 2.4E-7 T 23-10-2018 DLM_2187 828c453902f5351e07dfa5a20c323106 461 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 2.4E-7 T 23-10-2018 DLM_2187 828c453902f5351e07dfa5a20c323106 461 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 2.4E-7 T 23-10-2018 DLM_0678 8bfa71263bda3c804f1c0cefa33456a2 554 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 544 6.4E-156 T 23-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DLM_0678 8bfa71263bda3c804f1c0cefa33456a2 554 Pfam PF02652 L-lactate permease 14 540 4.4E-154 T 23-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 Gene3D G3DSA:2.30.30.790 3 120 1.3E-15 T 23-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 5.8E-49 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 PRINTS PR00061 Ribosomal protein L19 signature 90 115 4.5E-36 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 PRINTS PR00061 Ribosomal protein L19 signature 6 35 4.5E-36 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 PRINTS PR00061 Ribosomal protein L19 signature 36 65 4.5E-36 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 23-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 SUPERFAMILY SSF50104 1 117 2.01E-45 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily DLM_3307 6901e09a761264f134ca8ed6b812984c 122 Pfam PF01245 Ribosomal protein L19 3 115 1.8E-47 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 PIRSF PIRSF002191 1 122 3.1E-50 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3307 6901e09a761264f134ca8ed6b812984c 122 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 116 30.395 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3808 2c82212cd7ad86ac1b4c8b73a64cf7d9 158 Gene3D G3DSA:3.40.630.30 1 131 3.4E-39 T 23-10-2018 DLM_3808 2c82212cd7ad86ac1b4c8b73a64cf7d9 158 Pfam PF13508 Acetyltransferase (GNAT) domain 45 121 3.1E-13 T 23-10-2018 IPR000182 GNAT domain DLM_3808 2c82212cd7ad86ac1b4c8b73a64cf7d9 158 SUPERFAMILY SSF55729 16 130 2.19E-21 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3210 65668d490a328b71a7b0a6c5039804b7 316 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 86 270 2.0E-29 T 23-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DLM_3210 65668d490a328b71a7b0a6c5039804b7 316 SUPERFAMILY SSF53335 7 301 6.22E-66 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3210 65668d490a328b71a7b0a6c5039804b7 316 Gene3D G3DSA:3.40.50.150 96 314 7.2E-67 T 23-10-2018 DLM_3210 65668d490a328b71a7b0a6c5039804b7 316 Gene3D G3DSA:3.30.750.80 4 95 9.6E-27 T 23-10-2018 DLM_3930 9dae10091011c42d2357ac2632ee0b5b 269 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 4 252 2.9E-73 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DLM_3930 9dae10091011c42d2357ac2632ee0b5b 269 Pfam PF02673 Bacitracin resistance protein BacA 4 254 4.8E-82 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DLM_3930 9dae10091011c42d2357ac2632ee0b5b 269 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 259 16.819 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DLM_0824 79e9987602723c0d49fe5e760f6654a5 444 PIRSF PIRSF004810 1 444 1.8E-125 T 23-10-2018 IPR014047 Chromate transporter, long chain DLM_0824 79e9987602723c0d49fe5e760f6654a5 444 Pfam PF02417 Chromate transporter 257 439 2.2E-33 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DLM_0824 79e9987602723c0d49fe5e760f6654a5 444 Pfam PF02417 Chromate transporter 18 180 3.5E-33 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DLM_0824 79e9987602723c0d49fe5e760f6654a5 444 TIGRFAM TIGR00937 2A51: chromate efflux transporter 23 439 4.2E-66 T 23-10-2018 IPR014047 Chromate transporter, long chain DLM_0623 62fdca9e7c76b2d8f1a9466424ab33f4 443 SUPERFAMILY SSF53383 4 439 1.27E-130 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0623 62fdca9e7c76b2d8f1a9466424ab33f4 443 Gene3D G3DSA:3.40.640.10 58 337 9.8E-166 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0623 62fdca9e7c76b2d8f1a9466424ab33f4 443 Pfam PF00202 Aminotransferase class-III 22 436 3.0E-107 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_0623 62fdca9e7c76b2d8f1a9466424ab33f4 443 Gene3D G3DSA:3.90.1150.10 4 438 9.8E-166 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0623 62fdca9e7c76b2d8f1a9466424ab33f4 443 PIRSF PIRSF000521 25 442 5.4E-33 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_0623 62fdca9e7c76b2d8f1a9466424ab33f4 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 284 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2669 74bdd716193569422cfb7f14ea425264 208 Pfam PF06890 Bacteriophage Mu Gp45 protein 20 194 6.7E-50 T 23-10-2018 IPR014462 Phage-associated protein Gp45 DLM_2669 74bdd716193569422cfb7f14ea425264 208 PIRSF PIRSF012337 1 208 1.1E-67 T 23-10-2018 IPR014462 Phage-associated protein Gp45 DLM_2669 74bdd716193569422cfb7f14ea425264 208 Gene3D G3DSA:2.20.25.540 87 146 1.3E-7 T 23-10-2018 DLM_2669 74bdd716193569422cfb7f14ea425264 208 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 13 203 9.2E-33 T 23-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 Pfam PF00551 Formyl transferase 93 269 4.3E-35 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 Gene3D G3DSA:3.30.70.260 1 90 1.3E-13 T 23-10-2018 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 Gene3D G3DSA:3.40.50.170 92 287 2.8E-69 T 23-10-2018 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 93 115 1.1E-44 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 1.1E-44 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 115 142 1.1E-44 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.1E-44 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.1E-44 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 1.1E-44 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 SUPERFAMILY SSF53328 93 287 5.76E-58 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 287 43.363 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 SUPERFAMILY SSF55021 8 70 3.13E-6 T 23-10-2018 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 PIRSF PIRSF036480 5 288 1.5E-101 T 23-10-2018 DLM_3268 ddfeb94362799318a6517e80e70f5598 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 287 9.1E-90 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 31 561 1.3E-231 T 23-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 30 334 1.1E-110 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 Gene3D G3DSA:2.40.240.10 350 467 4.7E-76 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 Gene3D G3DSA:1.10.1160.10 263 341 1.1E-27 T 23-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 SUPERFAMILY SSF50715 342 558 1.52E-67 T 23-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 Gene3D G3DSA:2.40.240.10 343 556 4.7E-76 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 342 537 2.8E-57 T 23-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 47 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 62 75 2.5E-8 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 222 2.5E-8 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 45 2.5E-8 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 SUPERFAMILY SSF52374 12 338 3.85E-97 T 23-10-2018 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 Gene3D G3DSA:3.90.800.10 103 211 1.6E-106 T 23-10-2018 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 559 53.865 T 23-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 DLM_0689 dafc9399af3eaf71686423f25f581d5c 561 Gene3D G3DSA:3.40.50.620 30 249 1.6E-106 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_4549 418f2c652567aa36b93762d55087009f 158 Pfam PF12158 Protein of unknown function (DUF3592) 11 138 2.5E-13 T 23-10-2018 IPR021994 Protein of unknown function DUF3592 DLM_4027 162a4cb34d20279e0c62e6e72f7840f9 136 SUPERFAMILY SSF109635 4 95 1.7E-27 T 23-10-2018 IPR037187 DksA, N-terminal domain superfamily DLM_4027 162a4cb34d20279e0c62e6e72f7840f9 136 Gene3D G3DSA:1.20.120.910 2 135 9.8E-39 T 23-10-2018 DLM_4027 162a4cb34d20279e0c62e6e72f7840f9 136 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 94 129 7.8E-13 T 23-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DLM_4027 162a4cb34d20279e0c62e6e72f7840f9 136 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 18 126 1.4E-44 T 23-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DLM_4027 162a4cb34d20279e0c62e6e72f7840f9 136 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 14 135 28.113 T 23-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DLM_4027 162a4cb34d20279e0c62e6e72f7840f9 136 SUPERFAMILY SSF57716 96 135 3.42E-9 T 23-10-2018 DLM_4027 162a4cb34d20279e0c62e6e72f7840f9 136 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 99 123 - T 23-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DLM_3142 e4e5987e7f0c5c7c3f8f042841e75810 328 SUPERFAMILY SSF47240 46 289 6.49E-84 T 23-10-2018 IPR009078 Ferritin-like superfamily DLM_3142 e4e5987e7f0c5c7c3f8f042841e75810 328 Gene3D G3DSA:1.20.1260.10 22 328 1.1E-130 T 23-10-2018 IPR012347 Ferritin-like DLM_3142 e4e5987e7f0c5c7c3f8f042841e75810 328 Pfam PF05138 Phenylacetic acid catabolic protein 36 310 1.7E-102 T 23-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 DLM_3142 e4e5987e7f0c5c7c3f8f042841e75810 328 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 26 314 7.9E-164 T 23-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 Gene3D G3DSA:3.40.50.2300 1 126 8.0E-34 T 23-10-2018 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 Gene3D G3DSA:3.40.50.300 127 305 8.1E-62 T 23-10-2018 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 SUPERFAMILY SSF52540 135 375 2.6E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4043 5f6ade7189538c3465652f887bcc9043 444 Pfam PF00158 Sigma-54 interaction domain 135 301 1.7E-68 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 Gene3D G3DSA:1.10.10.60 383 444 1.0E-13 T 23-10-2018 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 Gene3D G3DSA:1.10.8.60 306 381 2.2E-16 T 23-10-2018 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 Pfam PF00072 Response regulator receiver domain 8 117 2.7E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 SMART SM00382 155 296 2.0E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4043 5f6ade7189538c3465652f887bcc9043 444 Pfam PF02954 Bacterial regulatory protein, Fis family 401 441 4.5E-14 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 424 1.2E-9 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 444 1.2E-9 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 SUPERFAMILY SSF52172 4 179 6.4E-43 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4043 5f6ade7189538c3465652f887bcc9043 444 SUPERFAMILY SSF46689 347 443 3.18E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_4043 5f6ade7189538c3465652f887bcc9043 444 SMART SM00448 6 117 3.4E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4539 2e57ebb1424058701a0807421b7a1b9a 395 SMART SM00771 247 371 4.2E-18 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DLM_4539 2e57ebb1424058701a0807421b7a1b9a 395 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 250 370 5.6E-25 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DLM_4539 2e57ebb1424058701a0807421b7a1b9a 395 Gene3D G3DSA:3.30.1400.10 246 378 8.3E-16 T 23-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 DLM_4539 2e57ebb1424058701a0807421b7a1b9a 395 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 249 374 9.0E-15 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DLM_4539 2e57ebb1424058701a0807421b7a1b9a 395 SUPERFAMILY SSF64383 246 378 1.57E-25 T 23-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 2.6E-13 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 SMART SM00420 6 58 1.8E-9 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 SUPERFAMILY SSF46785 4 58 4.29E-12 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 SUPERFAMILY SSF100950 72 234 1.47E-24 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.0E-7 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.0E-7 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 Gene3D G3DSA:1.10.10.10 1 55 1.6E-7 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 Pfam PF00455 DeoR C terminal sensor domain 75 233 5.3E-41 T 23-10-2018 IPR014036 DeoR C-terminal sensor domain DLM_1015 ce828999bf48d464e4ad0ad9d0ecdd63 255 SMART SM01134 71 235 1.3E-53 T 23-10-2018 DLM_4189 064d3289779b107d74d0c3ed095c2720 79 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 73 3.3E-18 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DLM_4189 064d3289779b107d74d0c3ed095c2720 79 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 73 12.872 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DLM_4189 064d3289779b107d74d0c3ed095c2720 79 Pfam PF04999 Cell division protein FtsL 1 75 4.3E-22 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 SMART SM00267 259 421 5.8E-46 T 23-10-2018 IPR000160 GGDEF domain DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 417 1.3E-34 T 23-10-2018 IPR000160 GGDEF domain DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 SUPERFAMILY SSF52172 138 265 2.85E-34 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 Gene3D G3DSA:3.40.50.2300 135 261 1.1E-30 T 23-10-2018 DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 Gene3D G3DSA:3.30.70.270 262 420 4.9E-44 T 23-10-2018 DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 418 3.3E-38 T 23-10-2018 IPR000160 GGDEF domain DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 Pfam PF00072 Response regulator receiver domain 141 250 3.6E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 Pfam PF00072 Response regulator receiver domain 20 119 2.9E-5 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 SUPERFAMILY SSF55073 275 419 4.55E-36 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 Gene3D G3DSA:3.40.50.2300 6 134 1.1E-12 T 23-10-2018 DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 SMART SM00448 139 253 6.5E-32 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 SMART SM00448 18 129 6.0E-6 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2524 50540e3eb832c5c1abc29f20661cc21e 435 SUPERFAMILY SSF52172 15 132 6.4E-15 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0274 978d6c70f06754447a66444c4d02192b 345 SUPERFAMILY SSF117892 118 232 9.55E-21 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily DLM_0274 978d6c70f06754447a66444c4d02192b 345 Pfam PF01145 SPFH domain / Band 7 family 55 242 7.3E-28 T 23-10-2018 IPR001107 Band 7 domain DLM_0274 978d6c70f06754447a66444c4d02192b 345 SMART SM00244 51 227 1.2E-28 T 23-10-2018 IPR001107 Band 7 domain DLM_0274 978d6c70f06754447a66444c4d02192b 345 TIGRFAM TIGR01933 hflK: HflK protein 53 318 5.6E-80 T 23-10-2018 IPR010201 HflK GO:0016021 DLM_0274 978d6c70f06754447a66444c4d02192b 345 Gene3D G3DSA:3.30.479.30 111 218 3.5E-20 T 23-10-2018 DLM_4065 e3d5d5389cd01957057700b5802746a6 205 SUPERFAMILY SSF53098 12 197 1.64E-31 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_4065 e3d5d5389cd01957057700b5802746a6 205 Pfam PF01612 3'-5' exonuclease 29 196 3.9E-15 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DLM_4065 e3d5d5389cd01957057700b5802746a6 205 Gene3D G3DSA:3.30.420.10 17 199 1.4E-34 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_4065 e3d5d5389cd01957057700b5802746a6 205 SMART SM00474 26 199 1.4E-9 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DLM_2366 e36bec2eff9822b9ddbaa13c9565ad61 102 Gene3D G3DSA:4.10.430.10 57 102 2.5E-16 T 23-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 DLM_2366 e36bec2eff9822b9ddbaa13c9565ad61 102 Pfam PF00816 H-NS histone family 10 96 1.6E-24 T 23-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 DLM_2366 e36bec2eff9822b9ddbaa13c9565ad61 102 SMART SM00528 57 102 1.6E-16 T 23-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 DLM_2366 e36bec2eff9822b9ddbaa13c9565ad61 102 SUPERFAMILY SSF81273 60 102 2.04E-12 T 23-10-2018 DLM_1448 8e1b97a5924ecba19ddf0a5277548f73 243 Pfam PF02565 Recombination protein O C terminal 88 233 7.3E-15 T 23-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DLM_1448 8e1b97a5924ecba19ddf0a5277548f73 243 Gene3D G3DSA:2.40.50.140 7 81 3.0E-30 T 23-10-2018 DLM_1448 8e1b97a5924ecba19ddf0a5277548f73 243 Gene3D G3DSA:1.20.1440.120 85 242 3.0E-38 T 23-10-2018 DLM_1448 8e1b97a5924ecba19ddf0a5277548f73 243 Pfam PF11967 Recombination protein O N terminal 9 79 3.7E-21 T 23-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DLM_1448 8e1b97a5924ecba19ddf0a5277548f73 243 SUPERFAMILY SSF50249 9 80 6.34E-13 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_1448 8e1b97a5924ecba19ddf0a5277548f73 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 10 167 3.2E-21 T 23-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DLM_1448 8e1b97a5924ecba19ddf0a5277548f73 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 238 20.943 T 23-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DLM_1448 8e1b97a5924ecba19ddf0a5277548f73 243 SUPERFAMILY SSF57863 90 196 1.83E-9 T 23-10-2018 IPR037278 ARFGAP/RecO-like zinc finger DLM_1831 08796d7a0777adbfac27bff5285bdc20 235 Pfam PF00005 ABC transporter 32 171 7.3E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1831 08796d7a0777adbfac27bff5285bdc20 235 SUPERFAMILY SSF52540 20 224 3.22E-60 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1831 08796d7a0777adbfac27bff5285bdc20 235 Gene3D G3DSA:3.40.50.300 13 234 3.2E-55 T 23-10-2018 DLM_1831 08796d7a0777adbfac27bff5285bdc20 235 SMART SM00382 30 220 5.8E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Gene3D G3DSA:1.10.150.20 547 601 1.2E-21 T 23-10-2018 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 SMART SM00278 580 599 0.99 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 SMART SM00278 548 567 9.1 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 534 3.8E-51 T 23-10-2018 IPR001162 UvrC family homology region DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Gene3D G3DSA:4.10.860.10 202 245 1.7E-5 T 23-10-2018 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Hamap MF_00203 UvrABC system protein C [uvrC]. 5 599 27.937 T 23-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 581 1.0E-183 T 23-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Pfam PF14520 Helix-hairpin-helix domain 549 600 4.4E-6 T 23-10-2018 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Pfam PF02151 UvrB/uvrC motif 205 237 1.2E-8 T 23-10-2018 IPR001943 UVR domain GO:0005515 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Pfam PF01541 GIY-YIG catalytic domain 20 94 4.1E-12 T 23-10-2018 IPR000305 GIY-YIG endonuclease DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 SUPERFAMILY SSF47781 499 601 6.67E-22 T 23-10-2018 IPR010994 RuvA domain 2-like DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Gene3D G3DSA:3.30.420.340 373 544 3.6E-52 T 23-10-2018 IPR038476 UvrC homology region 2 superfamily DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 Gene3D G3DSA:3.40.1440.10 6 103 8.0E-34 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 SMART SM00465 18 99 1.9E-21 T 23-10-2018 IPR000305 GIY-YIG endonuclease DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 SUPERFAMILY SSF82771 17 101 9.94E-25 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DLM_0471 0ab5707e3ab59a1e3674c702338a1a21 601 SUPERFAMILY SSF46600 191 243 8.5E-14 T 23-10-2018 IPR036876 UVR domain superfamily DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 SUPERFAMILY SSF56601 30 454 3.3E-71 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 Gene3D G3DSA:3.50.80.20 78 157 4.9E-16 T 23-10-2018 DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 352 366 1.1E-20 T 23-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 279 301 1.1E-20 T 23-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 54 73 1.1E-20 T 23-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 1.1E-20 T 23-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 337 351 1.1E-20 T 23-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 Gene3D G3DSA:3.40.710.10 265 443 5.8E-52 T 23-10-2018 DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 42 434 4.6E-61 T 23-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_0157 ad8ab8e19b42301803634ef266b9dc8b 475 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 16 435 1.5E-88 T 23-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_3310 a5c88077f9ddc253e296c0de82f62d2d 82 Gene3D G3DSA:3.30.1320.10 1 82 4.1E-36 T 23-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3310 a5c88077f9ddc253e296c0de82f62d2d 82 Pfam PF00886 Ribosomal protein S16 8 68 3.6E-27 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3310 a5c88077f9ddc253e296c0de82f62d2d 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 23-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3310 a5c88077f9ddc253e296c0de82f62d2d 82 SUPERFAMILY SSF54565 1 79 5.23E-32 T 23-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3310 a5c88077f9ddc253e296c0de82f62d2d 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.904 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3310 a5c88077f9ddc253e296c0de82f62d2d 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 80 2.7E-32 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 100 1.2E-40 T 23-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 263 271 - T 23-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 235 9.7E-45 T 23-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 SUPERFAMILY SSF55973 116 236 9.42E-50 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 Gene3D G3DSA:3.30.300.10 11 274 3.7E-181 T 23-10-2018 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 SUPERFAMILY SSF55973 3 110 2.04E-45 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 387 56.724 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 118 128 - T 23-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 Gene3D G3DSA:3.30.300.10 102 379 3.7E-181 T 23-10-2018 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 237 376 2.8E-69 T 23-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 PIRSF PIRSF000497 1 388 1.8E-171 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 SUPERFAMILY SSF55973 237 387 2.2E-70 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 Gene3D G3DSA:3.30.300.10 5 237 3.7E-181 T 23-10-2018 DLM_0066 4e3231b08b58bd719ec8df9a756f68a9 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 385 2.0E-183 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 SUPERFAMILY SSF100950 77 234 5.51E-32 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 SMART SM01134 73 234 1.1E-60 T 23-10-2018 DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 Pfam PF00455 DeoR C terminal sensor domain 77 233 3.8E-44 T 23-10-2018 IPR014036 DeoR C-terminal sensor domain DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 23-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.8E-5 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.8E-5 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 SUPERFAMILY SSF46785 7 71 1.41E-12 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 SMART SM00420 9 61 6.4E-13 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3657 7ee15089cc85a07a521bd8a0d1494371 263 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.5E-14 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3988 79277ec77c907fd30cdc7cf1f2e71c28 470 Pfam PF02321 Outer membrane efflux protein 285 463 3.0E-19 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_3988 79277ec77c907fd30cdc7cf1f2e71c28 470 Pfam PF02321 Outer membrane efflux protein 59 253 9.8E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_3988 79277ec77c907fd30cdc7cf1f2e71c28 470 SUPERFAMILY SSF56954 2 467 1.29E-94 T 23-10-2018 DLM_3988 79277ec77c907fd30cdc7cf1f2e71c28 470 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 466 2.3E-101 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_3988 79277ec77c907fd30cdc7cf1f2e71c28 470 Gene3D G3DSA:2.20.200.10 96 355 1.5E-116 T 23-10-2018 DLM_3988 79277ec77c907fd30cdc7cf1f2e71c28 470 Gene3D G3DSA:1.20.1600.10 49 466 1.5E-116 T 23-10-2018 DLM_0601 eff5a4ff05322e673131746b57f34279 247 Pfam PF00149 Calcineurin-like phosphoesterase 18 157 2.2E-14 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DLM_0601 eff5a4ff05322e673131746b57f34279 247 SUPERFAMILY SSF56300 10 226 2.85E-43 T 23-10-2018 DLM_0601 eff5a4ff05322e673131746b57f34279 247 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 73 78 - T 23-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_0601 eff5a4ff05322e673131746b57f34279 247 Gene3D G3DSA:3.60.21.10 4 228 1.1E-52 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like DLM_4411 da70763b5c98621751f37c51f8674fd0 143 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 5.1E-28 T 23-10-2018 IPR021131 Ribosomal protein L18e/L15P DLM_4411 da70763b5c98621751f37c51f8674fd0 143 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 23-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4411 da70763b5c98621751f37c51f8674fd0 143 Gene3D G3DSA:3.100.10.10 69 143 2.8E-11 T 23-10-2018 DLM_4411 da70763b5c98621751f37c51f8674fd0 143 SUPERFAMILY SSF52080 4 143 2.75E-43 T 23-10-2018 IPR036227 Ribosomal L18e/L15P superfamily DLM_4411 da70763b5c98621751f37c51f8674fd0 143 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 18.593 T 23-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DLM_4411 da70763b5c98621751f37c51f8674fd0 143 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 1.6E-44 T 23-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 Gene3D G3DSA:3.30.470.20 196 360 2.0E-61 T 23-10-2018 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 23-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 791 0.0 T 23-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 Gene3D G3DSA:3.30.1490.20 1 195 4.7E-79 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 483 787 7.1E-57 T 23-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 Gene3D G3DSA:3.50.30.10 361 480 2.8E-41 T 23-10-2018 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 23-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 352 3.7E-121 T 23-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 SUPERFAMILY SSF56059 2 387 8.36E-111 T 23-10-2018 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 PIRSF PIRSF000854 1 795 0.0 T 23-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 Gene3D G3DSA:3.20.20.60 481 795 9.1E-101 T 23-10-2018 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 SUPERFAMILY SSF52009 349 468 4.84E-34 T 23-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 2.7E-26 T 23-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DLM_3159 845ac67d72e0c2c312042495dd9d61ae 795 SUPERFAMILY SSF51621 467 791 2.43E-94 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_4296 11151e2cc227777345cda4e9c914b239 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 3.0E-5 T 23-10-2018 DLM_4296 11151e2cc227777345cda4e9c914b239 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 3.0E-5 T 23-10-2018 DLM_4296 11151e2cc227777345cda4e9c914b239 673 Gene3D G3DSA:3.50.50.60 470 626 7.3E-124 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4296 11151e2cc227777345cda4e9c914b239 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 331 2.1E-86 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DLM_4296 11151e2cc227777345cda4e9c914b239 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 636 1.6E-23 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_4296 11151e2cc227777345cda4e9c914b239 673 Gene3D G3DSA:3.20.20.70 3 370 4.5E-127 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_4296 11151e2cc227777345cda4e9c914b239 673 SUPERFAMILY SSF51971 334 522 5.41E-45 T 23-10-2018 DLM_4296 11151e2cc227777345cda4e9c914b239 673 SUPERFAMILY SSF51905 469 628 2.25E-22 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4296 11151e2cc227777345cda4e9c914b239 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 8.0E-11 T 23-10-2018 DLM_4296 11151e2cc227777345cda4e9c914b239 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 8.0E-11 T 23-10-2018 DLM_4296 11151e2cc227777345cda4e9c914b239 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 8.0E-11 T 23-10-2018 DLM_4296 11151e2cc227777345cda4e9c914b239 673 SUPERFAMILY SSF51395 3 363 2.22E-116 T 23-10-2018 DLM_4296 11151e2cc227777345cda4e9c914b239 673 Gene3D G3DSA:3.40.50.720 376 666 7.3E-124 T 23-10-2018 DLM_4525 2c6c54e03dd847ca2ef6c72e8f294399 257 SUPERFAMILY SSF46785 12 85 9.41E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4525 2c6c54e03dd847ca2ef6c72e8f294399 257 Pfam PF09339 IclR helix-turn-helix domain 14 64 1.0E-16 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DLM_4525 2c6c54e03dd847ca2ef6c72e8f294399 257 SMART SM00346 12 102 1.6E-25 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DLM_4525 2c6c54e03dd847ca2ef6c72e8f294399 257 SUPERFAMILY SSF55781 70 253 8.5E-36 T 23-10-2018 DLM_4525 2c6c54e03dd847ca2ef6c72e8f294399 257 Pfam PF01614 Bacterial transcriptional regulator 129 248 3.5E-9 T 23-10-2018 IPR014757 Transcription regulator IclR, C-terminal DLM_4525 2c6c54e03dd847ca2ef6c72e8f294399 257 Gene3D G3DSA:3.30.450.40 82 255 3.0E-34 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_4525 2c6c54e03dd847ca2ef6c72e8f294399 257 Gene3D G3DSA:1.10.10.10 1 80 6.7E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2851 043d9ef293c800962593dbec3d31f504 125 Pfam PF16290 Domain of unknown function (DUF4936) 25 112 2.8E-23 T 23-10-2018 IPR032556 Protein of unknown function DUF4936 DLM_1179 462774e7aba5955ca2570122a3f26feb 144 Pfam PF01475 Ferric uptake regulator family 17 134 2.6E-12 T 23-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DLM_1179 462774e7aba5955ca2570122a3f26feb 144 Gene3D G3DSA:3.30.1490.190 87 144 4.0E-13 T 23-10-2018 DLM_1179 462774e7aba5955ca2570122a3f26feb 144 SUPERFAMILY SSF46785 10 140 6.17E-27 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1179 462774e7aba5955ca2570122a3f26feb 144 Gene3D G3DSA:1.10.10.10 2 86 1.9E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2952 62a5cec12e233e6311e1aef807a896cb 283 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 48 246 2.7E-38 T 23-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 DLM_2952 62a5cec12e233e6311e1aef807a896cb 283 Pfam PF02361 Cobalt transport protein 45 250 9.3E-27 T 23-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DLM_3074 5657dc039e24396952d563594fae045e 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 72 5.7E-5 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DLM_3074 5657dc039e24396952d563594fae045e 159 SUPERFAMILY SSF54534 2 139 1.92E-28 T 23-10-2018 DLM_3074 5657dc039e24396952d563594fae045e 159 Gene3D G3DSA:3.10.50.40 3 153 7.8E-48 T 23-10-2018 DLM_3074 5657dc039e24396952d563594fae045e 159 Gene3D G3DSA:2.40.10.330 70 120 7.8E-48 T 23-10-2018 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 Pfam PF13481 AAA domain 52 203 2.1E-18 T 23-10-2018 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 Hamap MF_01498 DNA repair protein RadA [radA]. 5 436 43.562 T 23-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 432 1.7E-187 T 23-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 Gene3D G3DSA:3.40.50.300 46 260 2.9E-44 T 23-10-2018 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 Gene3D G3DSA:3.30.230.10 311 436 1.8E-19 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 SUPERFAMILY SSF54211 236 437 6.07E-40 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 SMART SM00382 72 225 8.1E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 SUPERFAMILY SSF52540 49 268 3.01E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 344 426 1.3E-6 T 23-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 PRINTS PR01874 DNA repair protein radA signature 105 122 9.4E-83 T 23-10-2018 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 PRINTS PR01874 DNA repair protein radA signature 229 255 9.4E-83 T 23-10-2018 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 PRINTS PR01874 DNA repair protein radA signature 64 92 9.4E-83 T 23-10-2018 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 PRINTS PR01874 DNA repair protein radA signature 155 179 9.4E-83 T 23-10-2018 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 PRINTS PR01874 DNA repair protein radA signature 303 326 9.4E-83 T 23-10-2018 DLM_0811 ae5d5d4b98d8e68e906fecd424c95920 438 PRINTS PR01874 DNA repair protein radA signature 194 222 9.4E-83 T 23-10-2018 DLM_2752 e42e48caf552613d7b8cc392f803a4ed 335 Gene3D G3DSA:3.30.70.3460 207 335 8.5E-33 T 23-10-2018 DLM_2752 e42e48caf552613d7b8cc392f803a4ed 335 Gene3D G3DSA:3.30.70.3460 75 167 8.2E-16 T 23-10-2018 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 Pfam PF01750 Hydrogenase maturation protease 23 151 2.2E-40 T 23-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 8 152 1.1E-45 T 23-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 Gene3D G3DSA:3.40.50.1450 5 166 3.0E-40 T 23-10-2018 IPR023430 Peptidase HybD-like domain superfamily DLM_2333 4f6c06905623afd4661c3860793de3d8 202 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 6 157 4.3E-61 T 23-10-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 PRINTS PR00446 Hydrogen uptake protein signature 6 18 9.6E-31 T 23-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 PRINTS PR00446 Hydrogen uptake protein signature 18 29 9.6E-31 T 23-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 PRINTS PR00446 Hydrogen uptake protein signature 70 86 9.6E-31 T 23-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 PRINTS PR00446 Hydrogen uptake protein signature 59 69 9.6E-31 T 23-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 PRINTS PR00446 Hydrogen uptake protein signature 38 55 9.6E-31 T 23-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DLM_2333 4f6c06905623afd4661c3860793de3d8 202 SUPERFAMILY SSF53163 6 164 1.1E-45 T 23-10-2018 IPR023430 Peptidase HybD-like domain superfamily DLM_0324 516b4537b556ba82ee590b5114b12f63 499 SMART SM00962 281 473 7.7E-42 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_0324 516b4537b556ba82ee590b5114b12f63 499 Gene3D G3DSA:3.40.50.300 275 461 2.0E-50 T 23-10-2018 DLM_0324 516b4537b556ba82ee590b5114b12f63 499 Pfam PF00448 SRP54-type protein, GTPase domain 283 472 4.2E-32 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_0324 516b4537b556ba82ee590b5114b12f63 499 SUPERFAMILY SSF52540 277 471 2.45E-30 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0324 516b4537b556ba82ee590b5114b12f63 499 Gene3D G3DSA:1.20.120.1380 249 463 2.0E-50 T 23-10-2018 DLM_0324 516b4537b556ba82ee590b5114b12f63 499 SMART SM00382 280 478 2.5E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0324 516b4537b556ba82ee590b5114b12f63 499 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 369 6.5E-81 T 23-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 DLM_2444 63d2589b98f79296d4c3d0a8bc651746 421 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 343 421 1.7E-20 T 23-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DLM_2444 63d2589b98f79296d4c3d0a8bc651746 421 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 23-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DLM_2444 63d2589b98f79296d4c3d0a8bc651746 421 Gene3D G3DSA:2.60.98.20 154 304 1.4E-26 T 23-10-2018 IPR037058 Flagellar hook protein FlgE superfamily DLM_2444 63d2589b98f79296d4c3d0a8bc651746 421 SUPERFAMILY SSF117143 79 383 5.49E-72 T 23-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DLM_2444 63d2589b98f79296d4c3d0a8bc651746 421 Pfam PF00460 Flagella basal body rod protein 3 33 2.6E-9 T 23-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DLM_2444 63d2589b98f79296d4c3d0a8bc651746 421 Pfam PF07559 Flagellar basal body protein FlaE 179 303 1.2E-20 T 23-10-2018 IPR011491 Flagellar hook protein FlgE DLM_2444 63d2589b98f79296d4c3d0a8bc651746 421 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 404 9.3E-95 T 23-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DLM_2491 c39417fe7c860398f4746db7756f9a67 376 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DLM_2491 c39417fe7c860398f4746db7756f9a67 376 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 368 6.7E-128 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DLM_2491 c39417fe7c860398f4746db7756f9a67 376 Gene3D G3DSA:3.40.50.1970 2 184 1.9E-57 T 23-10-2018 DLM_2491 c39417fe7c860398f4746db7756f9a67 376 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DLM_2491 c39417fe7c860398f4746db7756f9a67 376 SUPERFAMILY SSF56796 5 375 6.8E-135 T 23-10-2018 DLM_2491 c39417fe7c860398f4746db7756f9a67 376 Gene3D G3DSA:1.20.1090.10 186 376 5.3E-73 T 23-10-2018 DLM_0084 106185c9b580aa04ae63c7fdc9eb3d1a 203 SUPERFAMILY SSF52540 1 193 5.74E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0084 106185c9b580aa04ae63c7fdc9eb3d1a 203 Pfam PF01121 Dephospho-CoA kinase 5 181 1.8E-56 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DLM_0084 106185c9b580aa04ae63c7fdc9eb3d1a 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 189 8.9E-47 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DLM_0084 106185c9b580aa04ae63c7fdc9eb3d1a 203 Gene3D G3DSA:3.40.50.300 4 202 8.0E-61 T 23-10-2018 DLM_0084 106185c9b580aa04ae63c7fdc9eb3d1a 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 198 26.77 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DLM_4451 7313417700cdd6ae880a02570df5e445 408 Gene3D G3DSA:3.40.640.10 20 196 3.8E-37 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_4451 7313417700cdd6ae880a02570df5e445 408 PIRSF PIRSF000390 251 398 2.2E-9 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_4451 7313417700cdd6ae880a02570df5e445 408 PIRSF PIRSF000390 18 189 3.7E-30 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_4451 7313417700cdd6ae880a02570df5e445 408 Gene3D G3DSA:3.90.1150.10 262 405 3.5E-16 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_4451 7313417700cdd6ae880a02570df5e445 408 SUPERFAMILY SSF53383 28 382 2.93E-41 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4451 7313417700cdd6ae880a02570df5e445 408 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 262 386 2.6E-11 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_4451 7313417700cdd6ae880a02570df5e445 408 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 187 2.0E-29 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Gene3D G3DSA:3.30.2090.10 182 271 6.6E-264 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 SUPERFAMILY SSF82866 789 1012 4.97E-48 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 SUPERFAMILY SSF82693 43 139 9.94E-18 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 5.9E-21 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 5.9E-21 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 5.9E-21 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 5.9E-21 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 5.9E-21 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Gene3D G3DSA:3.30.70.1440 655 854 6.6E-264 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 SUPERFAMILY SSF82693 140 326 1.92E-20 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Pfam PF00873 AcrB/AcrD/AcrF family 7 1007 8.1E-174 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 SUPERFAMILY SSF82714 708 792 7.98E-14 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Gene3D G3DSA:1.20.1640.10 14 507 6.6E-264 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Gene3D G3DSA:1.20.1640.10 508 1006 6.6E-264 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 SUPERFAMILY SSF82714 188 267 4.71E-12 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Gene3D G3DSA:3.30.70.1320 139 329 6.6E-264 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Gene3D G3DSA:3.30.70.1430 556 654 6.6E-264 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 SUPERFAMILY SSF82866 299 489 4.45E-35 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 SUPERFAMILY SSF82693 556 632 1.6E-5 T 23-10-2018 DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Gene3D G3DSA:3.30.2090.10 706 794 6.6E-264 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_4520 c208b9c97bd4c93bdbfc10ee65b83e7d 1020 Gene3D G3DSA:3.30.70.1430 43 802 6.6E-264 T 23-10-2018 DLM_0295 2564453b42ab925bccd898513291cacd 398 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.8E-24 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_0295 2564453b42ab925bccd898513291cacd 398 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 2.8E-24 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_0295 2564453b42ab925bccd898513291cacd 398 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.8E-24 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_0295 2564453b42ab925bccd898513291cacd 398 Gene3D G3DSA:3.40.50.620 3 232 5.5E-76 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0295 2564453b42ab925bccd898513291cacd 398 SUPERFAMILY SSF52374 5 396 5.63E-87 T 23-10-2018 DLM_0295 2564453b42ab925bccd898513291cacd 398 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 1.9E-50 T 23-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0295 2564453b42ab925bccd898513291cacd 398 Pfam PF00579 tRNA synthetases class I (W and Y) 242 341 3.1E-10 T 23-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0295 2564453b42ab925bccd898513291cacd 398 Gene3D G3DSA:1.10.240.10 259 364 4.5E-36 T 23-10-2018 DLM_0295 2564453b42ab925bccd898513291cacd 398 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0295 2564453b42ab925bccd898513291cacd 398 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 177 4.6E-58 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_0529 0af84a5e548fc6814f1173bde5598584 357 SUPERFAMILY SSF111369 37 251 1.12E-19 T 23-10-2018 DLM_0529 0af84a5e548fc6814f1173bde5598584 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 343 5.4E-63 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_0529 0af84a5e548fc6814f1173bde5598584 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 247 5.5E-16 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_0529 0af84a5e548fc6814f1173bde5598584 357 Gene3D G3DSA:2.40.30.170 32 266 3.8E-62 T 23-10-2018 DLM_0529 0af84a5e548fc6814f1173bde5598584 357 Gene3D G3DSA:2.40.420.20 25 341 3.8E-62 T 23-10-2018 DLM_0529 0af84a5e548fc6814f1173bde5598584 357 Gene3D G3DSA:1.10.287.470 80 152 3.8E-62 T 23-10-2018 DLM_0529 0af84a5e548fc6814f1173bde5598584 357 Gene3D G3DSA:2.40.50.100 46 192 3.8E-62 T 23-10-2018 DLM_3705 d01fef5753e9d2e107bfa1f550755620 130 Gene3D G3DSA:3.10.20.400 2 95 5.9E-38 T 23-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DLM_3705 d01fef5753e9d2e107bfa1f550755620 130 SUPERFAMILY SSF141734 4 116 1.44E-47 T 23-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DLM_3705 d01fef5753e9d2e107bfa1f550755620 130 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 33.257 T 23-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DLM_3705 d01fef5753e9d2e107bfa1f550755620 130 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 4.6E-35 T 23-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DLM_3705 d01fef5753e9d2e107bfa1f550755620 130 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 104 6.0E-23 T 23-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DLM_2303 9be506143d1c0cc19914d925e7caad3a 196 Gene3D G3DSA:3.30.230.30 1 126 1.0E-43 T 23-10-2018 IPR036956 Impact, N-terminal domain superfamily DLM_2303 9be506143d1c0cc19914d925e7caad3a 196 SUPERFAMILY SSF54980 129 193 1.15E-9 T 23-10-2018 IPR035647 EF-G domain III/V-like DLM_2303 9be506143d1c0cc19914d925e7caad3a 196 Pfam PF01205 Uncharacterized protein family UPF0029 15 117 1.0E-25 T 23-10-2018 IPR001498 Impact, N-terminal DLM_2303 9be506143d1c0cc19914d925e7caad3a 196 Pfam PF09186 Domain of unknown function (DUF1949) 135 187 1.5E-10 T 23-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DLM_2303 9be506143d1c0cc19914d925e7caad3a 196 SUPERFAMILY SSF54211 4 124 7.97E-36 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 193 1.1E-30 T 23-10-2018 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 187 1.7E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 SUPERFAMILY SSF56784 4 220 1.87E-53 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 220 34.098 T 23-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 193 1.5E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 218 4.3E-56 T 23-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 182 195 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 Gene3D G3DSA:1.10.150.240 21 92 3.0E-54 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DLM_1140 1db5d95937a2f0f0ac7632ab0fcca1c0 221 Gene3D G3DSA:3.40.50.1000 9 210 3.0E-54 T 23-10-2018 IPR023214 HAD superfamily DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 684 3.7E-215 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 548 3.7E-202 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 684 24.835 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 SUPERFAMILY SSF109604 339 490 2.65E-19 T 23-10-2018 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 6.7E-33 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 6.7E-33 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 6.7E-33 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 6.7E-33 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 6.7E-33 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3006 edf2ce76103cc582dfb94d12422be3b7 686 Pfam PF05746 DALR anticodon binding domain 579 676 5.4E-7 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DLM_4101 968c7263bab3587ed75a330bae37a125 796 Gene3D G3DSA:3.30.565.10 2 220 1.6E-90 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4101 968c7263bab3587ed75a330bae37a125 796 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 175 3.0E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4101 968c7263bab3587ed75a330bae37a125 796 SUPERFAMILY SSF56719 394 786 8.11E-88 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DLM_4101 968c7263bab3587ed75a330bae37a125 796 SUPERFAMILY SSF54211 221 391 2.47E-58 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_4101 968c7263bab3587ed75a330bae37a125 796 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 796 104.342 T 23-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 SMART SM00433 36 789 4.3E-262 T 23-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_4101 968c7263bab3587ed75a330bae37a125 796 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 723 785 4.6E-30 T 23-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 SUPERFAMILY SSF55874 6 216 7.07E-71 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4101 968c7263bab3587ed75a330bae37a125 796 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 796 4.6E-301 T 23-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 Gene3D G3DSA:3.40.50.670 697 795 2.5E-25 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 36 51 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 728 744 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 71 84 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR00418 DNA topoisomerase II family signature 114 128 1.8E-70 T 23-10-2018 DLM_4101 968c7263bab3587ed75a330bae37a125 796 Gene3D G3DSA:3.40.50.670 398 568 7.9E-75 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_4101 968c7263bab3587ed75a330bae37a125 796 SMART SM00387 32 176 3.3E-31 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4101 968c7263bab3587ed75a330bae37a125 796 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 23-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_4101 968c7263bab3587ed75a330bae37a125 796 Pfam PF00204 DNA gyrase B 221 390 3.9E-56 T 23-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 6 16 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 749 761 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 765 781 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.8E-75 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DLM_4101 968c7263bab3587ed75a330bae37a125 796 Gene3D G3DSA:3.30.230.10 221 392 5.7E-71 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_4101 968c7263bab3587ed75a330bae37a125 796 Pfam PF01751 Toprim domain 419 531 2.3E-18 T 23-10-2018 IPR006171 TOPRIM domain DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 Gene3D G3DSA:3.40.50.300 159 351 1.2E-50 T 23-10-2018 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 Hamap MF_01454 GTPase Obg [obg]. 2 348 47.884 T 23-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 Pfam PF01926 50S ribosome-binding GTPase 161 285 1.4E-24 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 345 1.4E-138 T 23-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 Gene3D G3DSA:2.70.210.12 1 158 4.6E-58 T 23-10-2018 IPR036726 GTP1/OBG domain superfamily DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 PIRSF PIRSF002401 1 396 2.3E-133 T 23-10-2018 IPR035101 GTP-binding protein, Obg-type DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 SUPERFAMILY SSF82051 2 158 5.23E-56 T 23-10-2018 IPR036726 GTP1/OBG domain superfamily DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.5E-34 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.5E-34 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.5E-34 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.5E-34 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 Pfam PF01018 GTP1/OBG 4 158 2.4E-58 T 23-10-2018 IPR006169 GTP1/OBG domain DLM_3500 f1c18d1141c1de9086484f14ddfe87db 400 SUPERFAMILY SSF52540 151 351 8.79E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3247 72fe9e32af9e4e0943b7c937e4396315 352 SUPERFAMILY SSF46689 242 292 8.96E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3247 72fe9e32af9e4e0943b7c937e4396315 352 SMART SM00342 258 341 6.4E-31 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3247 72fe9e32af9e4e0943b7c937e4396315 352 SUPERFAMILY SSF46689 294 345 1.84E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3247 72fe9e32af9e4e0943b7c937e4396315 352 Pfam PF01965 DJ-1/PfpI family 61 201 3.9E-18 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DLM_3247 72fe9e32af9e4e0943b7c937e4396315 352 SUPERFAMILY SSF52317 35 223 3.06E-46 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_3247 72fe9e32af9e4e0943b7c937e4396315 352 Pfam PF12833 Helix-turn-helix domain 264 342 1.1E-25 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3247 72fe9e32af9e4e0943b7c937e4396315 352 Gene3D G3DSA:1.10.10.60 239 345 3.2E-31 T 23-10-2018 DLM_3247 72fe9e32af9e4e0943b7c937e4396315 352 Gene3D G3DSA:3.40.50.880 33 231 1.6E-57 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_0432 375147051601f0638ed0ecc74b79c799 279 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 276 2.3E-44 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DLM_0432 375147051601f0638ed0ecc74b79c799 279 Gene3D G3DSA:3.10.310.10 7 116 2.6E-60 T 23-10-2018 DLM_0432 375147051601f0638ed0ecc74b79c799 279 SUPERFAMILY SSF54506 2 275 4.58E-54 T 23-10-2018 DLM_0432 375147051601f0638ed0ecc74b79c799 279 PIRSF PIRSF016184 1 279 5.4E-53 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DLM_0432 375147051601f0638ed0ecc74b79c799 279 Gene3D G3DSA:3.10.310.10 117 270 2.6E-60 T 23-10-2018 DLM_0432 375147051601f0638ed0ecc74b79c799 279 Pfam PF02567 Phenazine biosynthesis-like protein 7 275 3.0E-49 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 Pfam PF01145 SPFH domain / Band 7 family 21 190 2.4E-31 T 23-10-2018 IPR001107 Band 7 domain DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 Gene3D G3DSA:3.30.479.30 45 177 3.0E-39 T 23-10-2018 DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 SMART SM00244 17 175 5.9E-59 T 23-10-2018 IPR001107 Band 7 domain DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 PRINTS PR00721 Stomatin signature 24 46 6.2E-30 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 PRINTS PR00721 Stomatin signature 151 169 6.2E-30 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 PRINTS PR00721 Stomatin signature 107 124 6.2E-30 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 PRINTS PR00721 Stomatin signature 127 150 6.2E-30 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 PRINTS PR00721 Stomatin signature 170 191 6.2E-30 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 PRINTS PR00721 Stomatin signature 72 93 6.2E-30 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 SUPERFAMILY SSF117892 48 182 4.71E-40 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily DLM_2306 85a1a09cd668cccce17b7b5c66f95dfc 313 Pfam PF16200 C-terminal region of band_7 251 312 1.3E-25 T 23-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 SUPERFAMILY SSF158791 42 151 7.06E-27 T 23-10-2018 DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 SUPERFAMILY SSF54631 154 293 1.52E-25 T 23-10-2018 DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 TIGRFAM TIGR00400 mgtE: magnesium transporter 41 466 4.3E-86 T 23-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 Pfam PF03448 MgtE intracellular N domain 51 151 1.3E-25 T 23-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 SUPERFAMILY SSF161093 295 466 1.23E-48 T 23-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 Pfam PF00571 CBS domain 218 270 9.2E-6 T 23-10-2018 IPR000644 CBS domain DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 Gene3D G3DSA:3.10.580.10 150 277 3.2E-38 T 23-10-2018 DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 Gene3D G3DSA:1.10.357.20 292 466 8.8E-47 T 23-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 Pfam PF01769 Divalent cation transporter 338 459 2.6E-25 T 23-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 Gene3D G3DSA:1.25.60.10 37 149 1.4E-16 T 23-10-2018 IPR038076 MgtE, N-terminal domain superfamily DLM_3076 42fe3bd8f9f0b6eb9056de7f56ade046 467 SMART SM00924 51 154 9.0E-35 T 23-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DLM_1158 d3981131b87320ef62de14f2fd16f576 147 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 144 17.312 T 23-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 DLM_1158 d3981131b87320ef62de14f2fd16f576 147 SUPERFAMILY SSF141457 1 134 1.2E-27 T 23-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DLM_1158 d3981131b87320ef62de14f2fd16f576 147 Pfam PF02623 FliW protein 19 134 5.6E-24 T 23-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 DLM_1158 d3981131b87320ef62de14f2fd16f576 147 Gene3D G3DSA:2.30.290.10 2 142 2.5E-34 T 23-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 SMART SM00342 213 296 2.3E-29 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 Pfam PF12833 Helix-turn-helix domain 220 297 1.1E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 SUPERFAMILY SSF46689 249 300 2.64E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 SUPERFAMILY SSF52317 2 177 1.5E-26 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 Gene3D G3DSA:3.40.50.880 1 185 4.2E-35 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 Gene3D G3DSA:1.10.10.60 192 302 3.4E-40 T 23-10-2018 DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 4.1E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 4.1E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0856 5b48b1db6689cd4c8842b5d1868e8b04 307 SUPERFAMILY SSF46689 197 247 8.96E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 TIGRFAM TIGR02961 allantoicase: allantoicase 26 343 1.4E-133 T 23-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 SUPERFAMILY SSF49785 190 345 3.4E-52 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 Gene3D G3DSA:2.60.120.260 183 346 5.7E-54 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 Gene3D G3DSA:2.60.120.260 18 182 1.1E-58 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 Pfam PF03561 Allantoicase repeat 201 342 1.8E-45 T 23-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 Pfam PF03561 Allantoicase repeat 35 178 4.6E-48 T 23-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 PIRSF PIRSF016516 10 346 2.0E-138 T 23-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 SUPERFAMILY SSF49785 25 180 3.23E-57 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily DLM_3046 59c5bf6f928ae3f631ac59d941ca8706 346 Hamap MF_00813 Probable allantoicase [alc]. 12 345 46.264 T 23-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 Gene3D G3DSA:1.20.1270.10 524 607 7.5E-27 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 SUPERFAMILY SSF100934 507 613 2.35E-20 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 Gene3D G3DSA:3.30.420.40 5 379 1.6E-164 T 23-10-2018 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 Gene3D G3DSA:2.60.34.10 383 523 4.3E-65 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 SUPERFAMILY SSF53067 187 382 1.42E-67 T 23-10-2018 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 Gene3D G3DSA:3.90.640.10 229 316 1.6E-164 T 23-10-2018 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 Gene3D G3DSA:3.30.420.40 180 366 1.6E-164 T 23-10-2018 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 SUPERFAMILY SSF53067 4 184 9.07E-64 T 23-10-2018 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 Pfam PF00012 Hsp70 protein 4 603 5.2E-262 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 SUPERFAMILY SSF100920 384 540 2.49E-60 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 2.1E-290 T 23-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.0E-79 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3025 df128b2bf9853708ce4814b1d6276b41 639 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 635 36.729 T 23-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DLM_3450 1dd938b53603116037a2a28b18a89fd6 220 SUPERFAMILY SSF52172 1 173 3.27E-41 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3450 1dd938b53603116037a2a28b18a89fd6 220 Gene3D G3DSA:3.40.50.2300 1 121 2.5E-38 T 23-10-2018 DLM_3450 1dd938b53603116037a2a28b18a89fd6 220 SMART SM00862 145 216 4.1E-20 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_3450 1dd938b53603116037a2a28b18a89fd6 220 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3450 1dd938b53603116037a2a28b18a89fd6 220 SMART SM00448 1 112 5.8E-40 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3450 1dd938b53603116037a2a28b18a89fd6 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 9.3E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_3450 1dd938b53603116037a2a28b18a89fd6 220 Gene3D G3DSA:1.10.10.10 122 218 8.6E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2864 77aadf2c141c9353d2fe9c63fac2bfb1 234 SUPERFAMILY SSF53790 3 232 2.75E-66 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_2864 77aadf2c141c9353d2fe9c63fac2bfb1 234 Gene3D G3DSA:3.30.950.10 121 234 9.6E-45 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DLM_2864 77aadf2c141c9353d2fe9c63fac2bfb1 234 Gene3D G3DSA:3.40.1010.10 2 120 1.9E-40 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_2864 77aadf2c141c9353d2fe9c63fac2bfb1 234 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 69 209 6.9E-10 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_2864 77aadf2c141c9353d2fe9c63fac2bfb1 234 PIRSF PIRSF005917 1 231 3.6E-49 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DLM_3231 d36534d4501dae793fae4647ee8b4d8e 450 PIRSF PIRSF002746 5 450 4.4E-153 T 23-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DLM_3231 d36534d4501dae793fae4647ee8b4d8e 450 Pfam PF02447 GntP family permease 10 449 8.7E-156 T 23-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DLM_3231 d36534d4501dae793fae4647ee8b4d8e 450 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 10 449 8.3E-145 T 23-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DLM_2859 51c61e0e6a94b8dd3f1a631ef1052353 319 SUPERFAMILY SSF53901 3 318 9.76E-75 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2859 51c61e0e6a94b8dd3f1a631ef1052353 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.0E-32 T 23-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DLM_2859 51c61e0e6a94b8dd3f1a631ef1052353 319 Gene3D G3DSA:3.40.47.10 1 319 8.5E-131 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2859 51c61e0e6a94b8dd3f1a631ef1052353 319 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 318 6.1E-131 T 23-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DLM_2859 51c61e0e6a94b8dd3f1a631ef1052353 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 319 2.1E-35 T 23-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DLM_2859 51c61e0e6a94b8dd3f1a631ef1052353 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 319 71.811 T 23-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 Pfam PF00455 DeoR C terminal sensor domain 80 237 1.2E-43 T 23-10-2018 IPR014036 DeoR C-terminal sensor domain DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 12 46 - T 23-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 62 2.1E-5 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 30 44 2.1E-5 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 Pfam PF08220 DeoR-like helix-turn-helix domain 12 66 2.0E-15 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 SMART SM00420 12 64 2.5E-15 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 SMART SM01134 78 239 3.0E-56 T 23-10-2018 DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 101 112 - T 23-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 SUPERFAMILY SSF46785 10 73 9.08E-13 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3470 1e52c083a3d805a6ebb0a650b220976e 259 SUPERFAMILY SSF100950 78 238 1.76E-26 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_2213 85656d9e397f5c052b17e92e566aee42 328 SUPERFAMILY SSF53383 3 324 2.19E-54 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2213 85656d9e397f5c052b17e92e566aee42 328 Gene3D G3DSA:3.90.1150.10 22 304 9.5E-49 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2213 85656d9e397f5c052b17e92e566aee42 328 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 189 202 - T 23-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DLM_2213 85656d9e397f5c052b17e92e566aee42 328 Pfam PF00155 Aminotransferase class I and II 52 297 4.0E-25 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_2213 85656d9e397f5c052b17e92e566aee42 328 Gene3D G3DSA:3.40.640.10 34 237 9.5E-49 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2213 85656d9e397f5c052b17e92e566aee42 328 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 322 5.7E-107 T 23-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 Gene3D G3DSA:3.30.70.330 420 494 3.4E-18 T 23-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 SMART SM00490 290 371 1.0E-27 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 Pfam PF03880 DbpA RNA binding domain 421 491 2.9E-20 T 23-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 Pfam PF00270 DEAD/DEAH box helicase 62 228 2.6E-46 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 SMART SM00487 57 254 4.1E-58 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 186 194 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 SUPERFAMILY SSF52540 107 392 7.2E-71 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 Pfam PF00271 Helicase conserved C-terminal domain 264 370 4.4E-27 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 Gene3D G3DSA:3.40.50.300 25 244 1.1E-71 T 23-10-2018 DLM_1422 d0dcaca51a2c0003c4c7512b1477ffa4 494 Gene3D G3DSA:3.40.50.300 245 403 2.5E-41 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 SUPERFAMILY SSF82714 723 810 1.57E-24 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Gene3D G3DSA:3.30.2090.10 722 810 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 SUPERFAMILY SSF82714 182 272 3.14E-22 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Gene3D G3DSA:3.30.70.1430 38 818 0.0 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 SUPERFAMILY SSF82866 296 497 1.31E-50 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 5.3E-112 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 SUPERFAMILY SSF82693 135 330 3.14E-28 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Gene3D G3DSA:3.30.70.1430 570 669 0.0 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Gene3D G3DSA:1.20.1640.10 8 515 0.0 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 SUPERFAMILY SSF82693 568 670 8.89E-34 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 SUPERFAMILY SSF82693 38 131 4.01E-27 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Gene3D G3DSA:3.30.70.1440 670 866 0.0 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 SUPERFAMILY SSF82866 807 1032 3.79E-46 T 23-10-2018 DLM_1764 45b3d83817b23d90e6fd6acd6a92bbc7 1047 Gene3D G3DSA:1.20.1640.10 516 1023 0.0 T 23-10-2018 DLM_3056 df6a875809e3c168794d0bd678ca9527 581 Gene3D G3DSA:3.40.50.1220 192 358 1.7E-47 T 23-10-2018 DLM_3056 df6a875809e3c168794d0bd678ca9527 581 SUPERFAMILY SSF52518 3 183 1.35E-50 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3056 df6a875809e3c168794d0bd678ca9527 581 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 5.0E-33 T 23-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DLM_3056 df6a875809e3c168794d0bd678ca9527 581 SUPERFAMILY SSF52518 369 563 8.48E-50 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3056 df6a875809e3c168794d0bd678ca9527 581 SUPERFAMILY SSF52467 161 350 1.9E-46 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DLM_3056 df6a875809e3c168794d0bd678ca9527 581 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 8.1E-53 T 23-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DLM_3056 df6a875809e3c168794d0bd678ca9527 581 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 8.5E-34 T 23-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DLM_3056 df6a875809e3c168794d0bd678ca9527 581 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 578 0.0 T 23-10-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 DLM_3056 df6a875809e3c168794d0bd678ca9527 581 Gene3D G3DSA:3.40.50.970 2 171 1.0E-65 T 23-10-2018 DLM_3056 df6a875809e3c168794d0bd678ca9527 581 Gene3D G3DSA:3.40.50.970 359 580 1.6E-63 T 23-10-2018 DLM_3575 ef4e94a89e9e378ba8988b1d24bafa5b 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 378 6.1E-72 T 23-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DLM_3575 ef4e94a89e9e378ba8988b1d24bafa5b 401 SUPERFAMILY SSF103473 6 393 1.07E-59 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3575 ef4e94a89e9e378ba8988b1d24bafa5b 401 Pfam PF07690 Major Facilitator Superfamily 18 360 1.5E-48 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_3575 ef4e94a89e9e378ba8988b1d24bafa5b 401 Gene3D G3DSA:1.20.1720.10 11 388 2.1E-93 T 23-10-2018 DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 Gene3D G3DSA:3.40.190.10 163 268 6.4E-44 T 23-10-2018 DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 Pfam PF03466 LysR substrate binding domain 90 295 4.2E-41 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 SUPERFAMILY SSF53850 89 295 3.94E-37 T 23-10-2018 DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 Gene3D G3DSA:3.40.190.10 92 290 6.4E-44 T 23-10-2018 DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 Gene3D G3DSA:1.10.10.10 2 82 3.4E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 SUPERFAMILY SSF46785 3 111 1.49E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2229 894ee481ba4f8195ac3f4347b7f56aa8 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.1E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3226 583b374603423089b41905423db21b63 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 3.9E-35 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DLM_3226 583b374603423089b41905423db21b63 64 SUPERFAMILY SSF140319 1 62 6.41E-27 T 23-10-2018 IPR036762 IscX-like superfamily DLM_3226 583b374603423089b41905423db21b63 64 Gene3D G3DSA:1.10.10.600 1 64 5.3E-30 T 23-10-2018 IPR036762 IscX-like superfamily DLM_3226 583b374603423089b41905423db21b63 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 9.9E-33 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DLM_3226 583b374603423089b41905423db21b63 64 PIRSF PIRSF039003 1 64 1.0E-35 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DLM_0113 4c8291b29f74660bac8f7ad8186c6998 305 SUPERFAMILY SSF51735 3 283 1.03E-27 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0113 4c8291b29f74660bac8f7ad8186c6998 305 Gene3D G3DSA:3.40.50.720 1 291 4.7E-64 T 23-10-2018 DLM_4513 2eff25e75f4838cd453491e8860af64e 132 SUPERFAMILY SSF52821 12 119 7.99E-22 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_4513 2eff25e75f4838cd453491e8860af64e 132 Pfam PF00581 Rhodanese-like domain 20 112 2.0E-9 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_4513 2eff25e75f4838cd453491e8860af64e 132 Gene3D G3DSA:3.40.250.10 4 117 3.7E-22 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_4513 2eff25e75f4838cd453491e8860af64e 132 SMART SM00450 18 116 7.2E-6 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 SUPERFAMILY SSF53850 91 300 1.36E-39 T 23-10-2018 DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 Gene3D G3DSA:1.10.10.10 1 85 5.3E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 Gene3D G3DSA:3.40.190.10 92 304 5.1E-97 T 23-10-2018 DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 Gene3D G3DSA:3.40.190.10 167 268 5.1E-97 T 23-10-2018 DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.8E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.5E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.5E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.5E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 Pfam PF03466 LysR substrate binding domain 89 293 5.6E-39 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3066 f0c3c90733c13ca73f94f9c17f3e9e7f 314 SUPERFAMILY SSF46785 1 112 1.33E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 SUPERFAMILY SSF90123 15 329 7.85E-79 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 Gene3D G3DSA:1.20.1560.10 1 330 1.9E-82 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 SUPERFAMILY SSF52540 332 581 3.11E-96 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 Pfam PF00664 ABC transporter transmembrane region 30 299 3.9E-55 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 Pfam PF00005 ABC transporter 360 510 1.7E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 Gene3D G3DSA:3.40.50.300 331 582 4.8E-97 T 23-10-2018 DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 13 583 6.2E-235 T 23-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 DLM_3537 9c599c8b5d4a8361fb15445508a551ac 589 SMART SM00382 369 556 1.2E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 3.6E-13 T 23-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 3.6E-13 T 23-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 3.6E-13 T 23-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 310 1.3E-116 T 23-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 Gene3D G3DSA:3.40.50.1820 2 311 2.3E-95 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 SUPERFAMILY SSF53474 5 297 6.16E-56 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 PIRSF PIRSF006431 1 314 1.6E-131 T 23-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 9.4E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 9.4E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 9.4E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_3798 8ca289d12692ed1f3b6c0fb4ae5899d5 315 Pfam PF00561 alpha/beta hydrolase fold 36 294 2.9E-26 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2039 b1d31f3ed8194838368872ec9ea9ad56 196 Pfam PF03358 NADPH-dependent FMN reductase 1 142 1.6E-29 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DLM_2039 b1d31f3ed8194838368872ec9ea9ad56 196 Gene3D G3DSA:3.40.50.360 1 185 2.4E-48 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_2039 b1d31f3ed8194838368872ec9ea9ad56 196 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 170 1.2E-61 T 23-10-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 DLM_2039 b1d31f3ed8194838368872ec9ea9ad56 196 SUPERFAMILY SSF52218 1 169 1.64E-30 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 SUPERFAMILY SSF81886 622 893 1.11E-85 T 23-10-2018 IPR036266 SecA, Wing/Scaffold superfamily DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 ProSitePatterns PS01312 SecA family signature. 495 510 - T 23-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 SUPERFAMILY SSF81767 227 363 6.41E-43 T 23-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Gene3D G3DSA:3.40.50.300 412 622 4.5E-88 T 23-10-2018 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Gene3D G3DSA:3.40.50.300 22 410 4.0E-176 T 23-10-2018 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 SUPERFAMILY SSF52540 5 410 2.66E-83 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 SMART SM00957 6 397 0.0 T 23-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 834 19.958 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Pfam PF01043 SecA preprotein cross-linking domain 233 353 4.9E-36 T 23-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Gene3D G3DSA:3.10.450.50 848 904 3.1E-8 T 23-10-2018 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 SUPERFAMILY SSF52540 411 620 4.13E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 PRINTS PR00906 SecA protein signature 101 115 2.6E-72 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 PRINTS PR00906 SecA protein signature 170 190 2.6E-72 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 PRINTS PR00906 SecA protein signature 334 356 2.6E-72 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 PRINTS PR00906 SecA protein signature 63 87 2.6E-72 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 PRINTS PR00906 SecA protein signature 371 388 2.6E-72 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 PRINTS PR00906 SecA protein signature 117 127 2.6E-72 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 PRINTS PR00906 SecA protein signature 408 421 2.6E-72 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Pfam PF07517 SecA DEAD-like domain 6 397 2.2E-130 T 23-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 SMART SM00958 228 353 8.8E-78 T 23-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Gene3D G3DSA:1.10.3060.10 623 835 2.6E-77 T 23-10-2018 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Pfam PF02810 SEC-C motif 885 903 1.1E-10 T 23-10-2018 IPR004027 SEC-C motif DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 820 0.0 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Gene3D G3DSA:3.90.1440.10 229 363 4.0E-176 T 23-10-2018 DLM_4255 6312629cdc67a3e18ff1207fb822f9c1 905 Pfam PF07516 SecA Wing and Scaffold domain 619 832 5.4E-71 T 23-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DLM_4249 e7330b3108ff134d825f9bc9545badda 360 Gene3D G3DSA:2.40.50.100 291 349 9.7E-7 T 23-10-2018 DLM_4249 e7330b3108ff134d825f9bc9545badda 360 SUPERFAMILY SSF50331 239 349 4.16E-16 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_4249 e7330b3108ff134d825f9bc9545badda 360 Gene3D G3DSA:3.40.50.300 2 277 8.9E-80 T 23-10-2018 DLM_4249 e7330b3108ff134d825f9bc9545badda 360 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 7.2E-119 T 23-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 DLM_4249 e7330b3108ff134d825f9bc9545badda 360 SMART SM00382 27 214 8.0E-19 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4249 e7330b3108ff134d825f9bc9545badda 360 SUPERFAMILY SSF52540 3 245 3.28E-87 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4249 e7330b3108ff134d825f9bc9545badda 360 Pfam PF00005 ABC transporter 18 164 1.5E-36 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4249 e7330b3108ff134d825f9bc9545badda 360 Pfam PF12857 TOBE-like domain 293 343 7.5E-17 T 23-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 DLM_4249 e7330b3108ff134d825f9bc9545badda 360 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3876 01fcf55ba0da2dd9868e06887af23f58 92 SUPERFAMILY SSF46689 1 90 2.15E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3876 01fcf55ba0da2dd9868e06887af23f58 92 Pfam PF01527 Transposase 4 70 2.6E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_3876 01fcf55ba0da2dd9868e06887af23f58 92 Gene3D G3DSA:1.10.10.60 7 88 1.5E-10 T 23-10-2018 DLM_0867 01fcf55ba0da2dd9868e06887af23f58 92 SUPERFAMILY SSF46689 1 90 2.15E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0867 01fcf55ba0da2dd9868e06887af23f58 92 Pfam PF01527 Transposase 4 70 2.6E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_0867 01fcf55ba0da2dd9868e06887af23f58 92 Gene3D G3DSA:1.10.10.60 7 88 1.5E-10 T 23-10-2018 DLM_2638 01fcf55ba0da2dd9868e06887af23f58 92 SUPERFAMILY SSF46689 1 90 2.15E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2638 01fcf55ba0da2dd9868e06887af23f58 92 Pfam PF01527 Transposase 4 70 2.6E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_2638 01fcf55ba0da2dd9868e06887af23f58 92 Gene3D G3DSA:1.10.10.60 7 88 1.5E-10 T 23-10-2018 DLM_0334 01fcf55ba0da2dd9868e06887af23f58 92 SUPERFAMILY SSF46689 1 90 2.15E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0334 01fcf55ba0da2dd9868e06887af23f58 92 Pfam PF01527 Transposase 4 70 2.6E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_0334 01fcf55ba0da2dd9868e06887af23f58 92 Gene3D G3DSA:1.10.10.60 7 88 1.5E-10 T 23-10-2018 DLM_1295 01fcf55ba0da2dd9868e06887af23f58 92 SUPERFAMILY SSF46689 1 90 2.15E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1295 01fcf55ba0da2dd9868e06887af23f58 92 Pfam PF01527 Transposase 4 70 2.6E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_1295 01fcf55ba0da2dd9868e06887af23f58 92 Gene3D G3DSA:1.10.10.60 7 88 1.5E-10 T 23-10-2018 DLM_1253 01fcf55ba0da2dd9868e06887af23f58 92 SUPERFAMILY SSF46689 1 90 2.15E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1253 01fcf55ba0da2dd9868e06887af23f58 92 Pfam PF01527 Transposase 4 70 2.6E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_1253 01fcf55ba0da2dd9868e06887af23f58 92 Gene3D G3DSA:1.10.10.60 7 88 1.5E-10 T 23-10-2018 DLM_4098 01fcf55ba0da2dd9868e06887af23f58 92 SUPERFAMILY SSF46689 1 90 2.15E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_4098 01fcf55ba0da2dd9868e06887af23f58 92 Pfam PF01527 Transposase 4 70 2.6E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_4098 01fcf55ba0da2dd9868e06887af23f58 92 Gene3D G3DSA:1.10.10.60 7 88 1.5E-10 T 23-10-2018 DLM_3338 fe515aed45928832729aeb824f45ea91 734 SUPERFAMILY SSF109604 20 215 5.65E-46 T 23-10-2018 DLM_3338 fe515aed45928832729aeb824f45ea91 734 SUPERFAMILY SSF81271 403 471 7.85E-21 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DLM_3338 fe515aed45928832729aeb824f45ea91 734 Gene3D G3DSA:3.30.70.260 658 734 4.6E-16 T 23-10-2018 DLM_3338 fe515aed45928832729aeb824f45ea91 734 Pfam PF13291 ACT domain 658 733 1.8E-16 T 23-10-2018 IPR002912 ACT domain DLM_3338 fe515aed45928832729aeb824f45ea91 734 Gene3D G3DSA:3.30.460.10 218 349 9.8E-49 T 23-10-2018 DLM_3338 fe515aed45928832729aeb824f45ea91 734 Gene3D G3DSA:3.10.20.30 405 476 8.2E-29 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_3338 fe515aed45928832729aeb824f45ea91 734 Pfam PF02824 TGS domain 412 471 7.3E-22 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DLM_3338 fe515aed45928832729aeb824f45ea91 734 SUPERFAMILY SSF81301 217 389 3.11E-63 T 23-10-2018 DLM_3338 fe515aed45928832729aeb824f45ea91 734 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 40 731 3.7E-181 T 23-10-2018 IPR004811 RelA/SpoT family GO:0015969 DLM_3338 fe515aed45928832729aeb824f45ea91 734 Pfam PF04607 Region found in RelA / SpoT proteins 260 370 2.1E-37 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 DLM_3338 fe515aed45928832729aeb824f45ea91 734 Gene3D G3DSA:1.10.3210.10 14 215 1.6E-45 T 23-10-2018 DLM_3338 fe515aed45928832729aeb824f45ea91 734 SUPERFAMILY SSF55021 657 733 1.25E-11 T 23-10-2018 DLM_3338 fe515aed45928832729aeb824f45ea91 734 Pfam PF13328 HD domain 40 201 9.8E-45 T 23-10-2018 IPR003607 HD/PDEase domain DLM_3338 fe515aed45928832729aeb824f45ea91 734 SMART SM00954 260 370 1.5E-67 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 Pfam PF01514 Secretory protein of YscJ/FliF family 39 227 4.2E-76 T 23-10-2018 IPR006182 Secretory protein YscJ/FliF DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 18 491 5.9E-126 T 23-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 Gene3D G3DSA:3.30.300.30 129 229 7.7E-11 T 23-10-2018 DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 Pfam PF08345 Flagellar M-ring protein C-terminal 260 442 4.8E-50 T 23-10-2018 IPR013556 Flagellar M-ring C-terminal DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 PIRSF PIRSF004862 11 586 1.0E-154 T 23-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 PRINTS PR01009 Flagellar M-ring protein signature 160 174 1.1E-41 T 23-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 PRINTS PR01009 Flagellar M-ring protein signature 366 390 1.1E-41 T 23-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 PRINTS PR01009 Flagellar M-ring protein signature 203 221 1.1E-41 T 23-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 PRINTS PR01009 Flagellar M-ring protein signature 128 146 1.1E-41 T 23-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DLM_0969 15617618cdfc8952258aa4853cdcbc48 586 PRINTS PR01009 Flagellar M-ring protein signature 273 291 1.1E-41 T 23-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DLM_1830 a5843bc2f453191cf805477ca5d618b1 228 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 218 1.6E-73 T 23-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 DLM_1830 a5843bc2f453191cf805477ca5d618b1 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 216 4.6E-21 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1830 a5843bc2f453191cf805477ca5d618b1 228 Gene3D G3DSA:1.10.3720.10 2 223 1.5E-64 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1830 a5843bc2f453191cf805477ca5d618b1 228 SUPERFAMILY SSF161098 4 219 1.96E-54 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4099 e713e082befd942afc995664ce01bda1 270 Pfam PF00665 Integrase core domain 103 217 5.4E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_4099 e713e082befd942afc995664ce01bda1 270 Pfam PF13276 HTH-like domain 22 75 1.0E-16 T 23-10-2018 IPR025948 HTH-like domain DLM_4099 e713e082befd942afc995664ce01bda1 270 Gene3D G3DSA:3.30.420.10 101 263 7.8E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_4099 e713e082befd942afc995664ce01bda1 270 SUPERFAMILY SSF53098 96 261 2.28E-41 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1252 e713e082befd942afc995664ce01bda1 270 Pfam PF00665 Integrase core domain 103 217 5.4E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_1252 e713e082befd942afc995664ce01bda1 270 Pfam PF13276 HTH-like domain 22 75 1.0E-16 T 23-10-2018 IPR025948 HTH-like domain DLM_1252 e713e082befd942afc995664ce01bda1 270 Gene3D G3DSA:3.30.420.10 101 263 7.8E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1252 e713e082befd942afc995664ce01bda1 270 SUPERFAMILY SSF53098 96 261 2.28E-41 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_3480 8bbcecd5cba2527a0891b22ca804de23 352 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 23-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DLM_3480 8bbcecd5cba2527a0891b22ca804de23 352 Pfam PF00155 Aminotransferase class I and II 26 346 5.5E-55 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_3480 8bbcecd5cba2527a0891b22ca804de23 352 Gene3D G3DSA:3.40.640.10 38 259 2.9E-107 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3480 8bbcecd5cba2527a0891b22ca804de23 352 Gene3D G3DSA:3.90.1150.10 20 339 2.9E-107 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3480 8bbcecd5cba2527a0891b22ca804de23 352 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 348 5.7E-91 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DLM_3480 8bbcecd5cba2527a0891b22ca804de23 352 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 54.284 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DLM_3480 8bbcecd5cba2527a0891b22ca804de23 352 SUPERFAMILY SSF53383 5 350 1.95E-76 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3135 efca375741dc0e8261ef3cc763cac727 401 PIRSF PIRSF000429 1 401 6.9E-129 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 4.6E-133 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 Gene3D G3DSA:3.40.47.10 6 282 5.7E-152 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 2.4E-221 T 23-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 4.8E-45 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 Gene3D G3DSA:3.40.47.10 141 398 5.7E-152 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 3.0E-69 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 SUPERFAMILY SSF53901 4 275 9.67E-77 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 DLM_3135 efca375741dc0e8261ef3cc763cac727 401 SUPERFAMILY SSF53901 277 400 3.77E-45 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.809 T 23-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 SMART SM01390 3 95 9.4E-52 T 23-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 Pfam PF01479 S4 domain 97 143 1.8E-20 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 23-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 SUPERFAMILY SSF55174 3 206 1.7E-72 T 23-10-2018 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 Gene3D G3DSA:3.10.290.10 103 191 1.9E-34 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.3E-83 T 23-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.0E-33 T 23-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 SMART SM00363 96 160 6.7E-19 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4415 8f6b59a429349f184ccfe8bc460f00f0 206 Gene3D G3DSA:1.10.1050.10 1 102 2.2E-45 T 23-10-2018 DLM_3730 a34e36658dbe23b5f1ba534de413de57 250 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 26 165 2.0E-35 T 23-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 DLM_3730 a34e36658dbe23b5f1ba534de413de57 250 Gene3D G3DSA:1.20.120.1760 11 140 3.5E-16 T 23-10-2018 DLM_3730 a34e36658dbe23b5f1ba534de413de57 250 Pfam PF01066 CDP-alcohol phosphatidyltransferase 20 83 7.0E-14 T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DLM_3730 a34e36658dbe23b5f1ba534de413de57 250 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DLM_2958 2f8020560339ca0d35724bab427c62e6 467 Gene3D G3DSA:3.30.9.10 144 364 2.8E-49 T 23-10-2018 DLM_2958 2f8020560339ca0d35724bab427c62e6 467 Pfam PF01266 FAD dependent oxidoreductase 50 393 3.8E-46 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_2958 2f8020560339ca0d35724bab427c62e6 467 SUPERFAMILY SSF51905 35 319 1.47E-40 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2958 2f8020560339ca0d35724bab427c62e6 467 Gene3D G3DSA:3.50.50.60 50 402 2.8E-49 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0139 21cd59467022c1151fac44556d74025f 443 Gene3D G3DSA:1.10.10.60 384 441 5.0E-11 T 23-10-2018 DLM_0139 21cd59467022c1151fac44556d74025f 443 SUPERFAMILY SSF46689 386 440 5.38E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0139 21cd59467022c1151fac44556d74025f 443 Gene3D G3DSA:1.10.8.60 317 381 3.1E-20 T 23-10-2018 DLM_0139 21cd59467022c1151fac44556d74025f 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DLM_0139 21cd59467022c1151fac44556d74025f 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DLM_0139 21cd59467022c1151fac44556d74025f 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DLM_0139 21cd59467022c1151fac44556d74025f 443 Pfam PF00072 Response regulator receiver domain 7 116 1.1E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0139 21cd59467022c1151fac44556d74025f 443 Gene3D G3DSA:3.40.50.2300 3 136 3.1E-33 T 23-10-2018 DLM_0139 21cd59467022c1151fac44556d74025f 443 Pfam PF00158 Sigma-54 interaction domain 146 313 2.8E-66 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_0139 21cd59467022c1151fac44556d74025f 443 SMART SM00382 166 309 2.2E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0139 21cd59467022c1151fac44556d74025f 443 Gene3D G3DSA:3.40.50.300 137 316 3.5E-63 T 23-10-2018 DLM_0139 21cd59467022c1151fac44556d74025f 443 SUPERFAMILY SSF52172 3 190 1.29E-43 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0139 21cd59467022c1151fac44556d74025f 443 SMART SM00448 5 116 5.1E-32 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0139 21cd59467022c1151fac44556d74025f 443 SUPERFAMILY SSF52540 146 375 3.17E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0920 943ce33d53e413a3e912086402ceb410 280 SUPERFAMILY SSF53850 83 279 3.62E-29 T 23-10-2018 DLM_0920 943ce33d53e413a3e912086402ceb410 280 Gene3D G3DSA:3.40.190.10 154 249 2.3E-46 T 23-10-2018 DLM_0920 943ce33d53e413a3e912086402ceb410 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 5.8E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0920 943ce33d53e413a3e912086402ceb410 280 Gene3D G3DSA:3.40.190.10 93 273 2.3E-46 T 23-10-2018 DLM_0920 943ce33d53e413a3e912086402ceb410 280 Pfam PF03466 LysR substrate binding domain 81 278 1.7E-27 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0920 943ce33d53e413a3e912086402ceb410 280 Gene3D G3DSA:1.10.10.10 1 89 4.3E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0920 943ce33d53e413a3e912086402ceb410 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 15 26 6.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0920 943ce33d53e413a3e912086402ceb410 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 36 6.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0920 943ce33d53e413a3e912086402ceb410 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 6.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0920 943ce33d53e413a3e912086402ceb410 280 SUPERFAMILY SSF46785 3 104 5.77E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2541 ed7a2ac50aca12beac1d01a7a5e26d64 430 Pfam PF13194 Domain of unknown function (DUF4010) 192 400 9.0E-56 T 23-10-2018 IPR025105 Domain of unknown function DUF4010 DLM_2541 ed7a2ac50aca12beac1d01a7a5e26d64 430 Pfam PF02308 MgtC family 24 142 3.4E-16 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 Gene3D G3DSA:3.50.50.60 485 614 1.3E-63 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 PRINTS PR00419 Adrenodoxin reductase family signature 390 412 4.6E-8 T 23-10-2018 DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 PRINTS PR00419 Adrenodoxin reductase family signature 413 426 4.6E-8 T 23-10-2018 DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 Gene3D G3DSA:3.40.50.720 390 638 1.3E-63 T 23-10-2018 DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 390 622 8.3E-11 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 344 1.0E-57 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 SUPERFAMILY SSF51905 379 683 1.09E-28 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 Gene3D G3DSA:3.20.20.70 1 384 1.1E-110 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3257 9122b873ac606e2f3163bdc136f685d7 686 SUPERFAMILY SSF51395 1 374 1.15E-99 T 23-10-2018 DLM_0980 adaace3d4c1f8a5f11954abfdfb81b74 148 Gene3D G3DSA:2.30.330.10 55 148 1.5E-34 T 23-10-2018 IPR036429 SpoA-like superfamily DLM_0980 adaace3d4c1f8a5f11954abfdfb81b74 148 PRINTS PR00956 Flagellar motor switch protein FliN signature 100 113 9.0E-29 T 23-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DLM_0980 adaace3d4c1f8a5f11954abfdfb81b74 148 PRINTS PR00956 Flagellar motor switch protein FliN signature 84 100 9.0E-29 T 23-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DLM_0980 adaace3d4c1f8a5f11954abfdfb81b74 148 PRINTS PR00956 Flagellar motor switch protein FliN signature 113 128 9.0E-29 T 23-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DLM_0980 adaace3d4c1f8a5f11954abfdfb81b74 148 PRINTS PR00956 Flagellar motor switch protein FliN signature 67 83 9.0E-29 T 23-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DLM_0980 adaace3d4c1f8a5f11954abfdfb81b74 148 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 67 137 2.5E-24 T 23-10-2018 IPR001543 Surface presentation of antigen (SpoA) DLM_0980 adaace3d4c1f8a5f11954abfdfb81b74 148 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 64 138 9.8E-33 T 23-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 DLM_0980 adaace3d4c1f8a5f11954abfdfb81b74 148 SUPERFAMILY SSF101801 63 146 8.11E-26 T 23-10-2018 IPR036429 SpoA-like superfamily DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SUPERFAMILY SSF55785 645 749 2.97E-20 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Gene3D G3DSA:1.10.287.950 756 951 7.4E-43 T 23-10-2018 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 392 511 1.7E-15 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 645 758 5.7E-11 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 147 9.2E-14 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 523 632 2.6E-14 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 267 4.3E-14 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 279 392 2.6E-15 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Gene3D G3DSA:3.30.450.20 648 750 3.8E-16 T 23-10-2018 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SUPERFAMILY SSF55785 37 145 3.84E-22 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Pfam PF13426 PAS domain 410 507 1.5E-12 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Pfam PF13426 PAS domain 162 263 1.7E-12 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00091 635 705 4.4 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00091 515 583 0.83 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00091 271 339 3.2 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00091 391 461 0.085 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00091 25 95 4.3 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00091 149 216 3.9 T 23-10-2018 IPR000014 PAS domain DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Gene3D G3DSA:3.30.450.20 399 523 3.4E-19 T 23-10-2018 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Gene3D G3DSA:3.30.450.20 279 398 3.0E-23 T 23-10-2018 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SUPERFAMILY SSF58104 735 946 8.5E-46 T 23-10-2018 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SUPERFAMILY SSF55785 526 631 8.72E-25 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 791 940 2.2E-34 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SUPERFAMILY SSF55785 160 261 3.66E-23 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 857 886 4.3E-16 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 828 855 4.3E-16 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00283 748 948 8.8E-18 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Gene3D G3DSA:3.30.450.20 19 155 3.1E-22 T 23-10-2018 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SUPERFAMILY SSF55785 406 509 9.34E-18 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Pfam PF08447 PAS fold 539 624 6.4E-16 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Pfam PF08447 PAS fold 296 379 2.7E-14 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Pfam PF08447 PAS fold 660 745 2.6E-8 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Gene3D G3DSA:3.30.450.20 156 278 4.2E-20 T 23-10-2018 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Gene3D G3DSA:3.30.450.20 524 647 6.8E-22 T 23-10-2018 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 Pfam PF08448 PAS fold 37 143 1.8E-12 T 23-10-2018 IPR013656 PAS fold-4 DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SUPERFAMILY SSF55785 281 383 5.32E-25 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00086 344 386 7.7E-6 T 23-10-2018 IPR001610 PAC motif DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00086 588 630 1.6E-5 T 23-10-2018 IPR001610 PAC motif DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00086 222 264 0.34 T 23-10-2018 IPR001610 PAC motif DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00086 710 752 230.0 T 23-10-2018 IPR001610 PAC motif DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00086 100 142 1.5 T 23-10-2018 IPR001610 PAC motif DLM_1231 263f9acdd359fbbb883df8677b0d0358 951 SMART SM00086 466 508 0.17 T 23-10-2018 IPR001610 PAC motif DLM_3707 1a1b9f3b571a153bd45d2166a88fb01c 226 Gene3D G3DSA:3.20.20.70 1 221 1.4E-75 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3707 1a1b9f3b571a153bd45d2166a88fb01c 226 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 219 27.866 T 23-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DLM_3707 1a1b9f3b571a153bd45d2166a88fb01c 226 Pfam PF00977 Histidine biosynthesis protein 3 211 9.0E-69 T 23-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DLM_3707 1a1b9f3b571a153bd45d2166a88fb01c 226 SUPERFAMILY SSF51366 2 217 6.59E-63 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DLM_2182 24b38050ea334610e3590adbe995280b 243 Pfam PF13545 Crp-like helix-turn-helix domain 158 223 5.8E-14 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_2182 24b38050ea334610e3590adbe995280b 243 SMART SM00419 169 217 0.0011 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_2182 24b38050ea334610e3590adbe995280b 243 Gene3D G3DSA:2.60.120.10 11 135 1.0E-5 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2182 24b38050ea334610e3590adbe995280b 243 SUPERFAMILY SSF51206 18 131 1.67E-6 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like DLM_2182 24b38050ea334610e3590adbe995280b 243 SUPERFAMILY SSF46785 155 229 3.77E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2182 24b38050ea334610e3590adbe995280b 243 Gene3D G3DSA:1.10.10.10 152 225 1.8E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 SUPERFAMILY SSF52317 148 365 1.09E-61 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 270 287 3.7E-40 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 222 236 3.7E-40 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 253 269 3.7E-40 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 295 306 3.7E-40 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 183 197 3.7E-40 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 Gene3D G3DSA:3.50.30.20 1 143 8.9E-55 T 23-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 SUPERFAMILY SSF52021 1 132 9.29E-54 T 23-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00097 Anthranilate synthase component II signature 253 264 1.8E-5 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00097 Anthranilate synthase component II signature 225 234 1.8E-5 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00097 Anthranilate synthase component II signature 338 351 1.8E-5 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 1 364 2.0E-143 T 23-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 Pfam PF00117 Glutamine amidotransferase class-I 186 361 8.4E-48 T 23-10-2018 IPR017926 Glutamine amidotransferase DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 Gene3D G3DSA:3.40.50.880 144 366 4.1E-75 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 1 124 7.7E-49 T 23-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 SMART SM01097 1 125 4.1E-80 T 23-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00096 Glutamine amidotransferase superfamily signature 253 264 6.1E-11 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00096 Glutamine amidotransferase superfamily signature 338 351 6.1E-11 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 PRINTS PR00096 Glutamine amidotransferase superfamily signature 225 234 6.1E-11 T 23-10-2018 DLM_0095 ada353e9255d6c2a15d342f960d11a3c 367 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 367 45.953 T 23-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_3015 635547f51193d0853e08fc381d117922 372 Gene3D G3DSA:3.90.380.10 249 372 1.6E-6 T 23-10-2018 DLM_3015 635547f51193d0853e08fc381d117922 372 Gene3D G3DSA:3.90.380.10 18 225 1.0E-65 T 23-10-2018 DLM_3015 635547f51193d0853e08fc381d117922 372 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 180 370 3.4E-22 T 23-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 SUPERFAMILY SSF50022 15 155 3.14E-44 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 Pfam PF00355 Rieske [2Fe-2S] domain 43 129 3.5E-18 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 Hamap MF_02097 Carnitine monooxygenase oxygenase subunit. 1 371 74.684 T 23-10-2018 IPR039004 Carnitine monooxygenase oxygenase subunit GO:0009437|GO:0051537 DLM_3015 635547f51193d0853e08fc381d117922 372 Gene3D G3DSA:2.102.10.10 41 161 1.0E-65 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 SUPERFAMILY SSF55961 158 369 4.71E-34 T 23-10-2018 DLM_3015 635547f51193d0853e08fc381d117922 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 7.8E-24 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 7.8E-24 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 180 202 7.8E-24 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 7.8E-24 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 7.8E-24 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3015 635547f51193d0853e08fc381d117922 372 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 141 167 7.8E-24 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_1931 f47ef80d43f4a0007b5d1b9520d27315 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.6E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1931 f47ef80d43f4a0007b5d1b9520d27315 308 SUPERFAMILY SSF53850 87 295 5.74E-33 T 23-10-2018 DLM_1931 f47ef80d43f4a0007b5d1b9520d27315 308 Gene3D G3DSA:1.10.10.10 1 90 5.9E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1931 f47ef80d43f4a0007b5d1b9520d27315 308 Pfam PF03466 LysR substrate binding domain 86 292 1.6E-32 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1931 f47ef80d43f4a0007b5d1b9520d27315 308 Gene3D G3DSA:3.40.190.290 91 296 1.1E-37 T 23-10-2018 DLM_1931 f47ef80d43f4a0007b5d1b9520d27315 308 SUPERFAMILY SSF46785 1 82 3.06E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1139 48e3a8423a806107cddc744ff9751d06 487 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 168 1.1E-34 T 23-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_1139 48e3a8423a806107cddc744ff9751d06 487 Gene3D G3DSA:3.60.120.10 1 485 4.8E-180 T 23-10-2018 IPR005801 ADC synthase GO:0009058 DLM_1139 48e3a8423a806107cddc744ff9751d06 487 Pfam PF00425 chorismate binding enzyme 217 470 1.0E-99 T 23-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DLM_1139 48e3a8423a806107cddc744ff9751d06 487 SUPERFAMILY SSF56322 14 479 2.49E-161 T 23-10-2018 IPR005801 ADC synthase GO:0009058 DLM_1139 48e3a8423a806107cddc744ff9751d06 487 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 478 1.5E-171 T 23-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_1139 48e3a8423a806107cddc744ff9751d06 487 PRINTS PR00095 Anthranilate synthase component I signature 318 331 3.7E-25 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_1139 48e3a8423a806107cddc744ff9751d06 487 PRINTS PR00095 Anthranilate synthase component I signature 412 426 3.7E-25 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_1139 48e3a8423a806107cddc744ff9751d06 487 PRINTS PR00095 Anthranilate synthase component I signature 332 345 3.7E-25 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_1139 48e3a8423a806107cddc744ff9751d06 487 PRINTS PR00095 Anthranilate synthase component I signature 427 441 3.7E-25 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 5 426 35.323 T 23-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 Gene3D G3DSA:1.10.3090.10 163 407 1.8E-81 T 23-10-2018 DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 SUPERFAMILY SSF81891 163 396 4.97E-47 T 23-10-2018 DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 Gene3D G3DSA:3.30.460.10 8 160 3.2E-56 T 23-10-2018 DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 10 425 7.4E-161 T 23-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 SUPERFAMILY SSF81301 12 161 7.52E-40 T 23-10-2018 DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 191 252 2.8E-22 T 23-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 Pfam PF12626 Polymerase A arginine-rich C-terminus 305 422 6.1E-41 T 23-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain DLM_0650 02f952fe24111a8efdd0a8ead741d84d 439 Pfam PF01743 Poly A polymerase head domain 41 163 6.9E-34 T 23-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DLM_2776 37f6b330ab833743e637c48e23f655a6 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 17 106 1.0E-29 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DLM_2776 37f6b330ab833743e637c48e23f655a6 113 Gene3D G3DSA:3.10.50.40 1 108 1.3E-40 T 23-10-2018 DLM_2776 37f6b330ab833743e637c48e23f655a6 113 SUPERFAMILY SSF54534 2 110 1.49E-38 T 23-10-2018 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 Gene3D G3DSA:3.30.43.10 1 93 6.3E-23 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 Gene3D G3DSA:3.30.70.2190 217 333 5.5E-27 T 23-10-2018 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 SUPERFAMILY SSF56176 2 217 1.46E-70 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 SUPERFAMILY SSF55103 220 461 5.89E-53 T 23-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 Gene3D G3DSA:3.30.70.2740 334 419 1.4E-25 T 23-10-2018 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 458 2.1E-52 T 23-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 Gene3D G3DSA:3.30.465.10 95 215 3.9E-42 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 Gene3D G3DSA:1.10.45.10 420 459 5.1E-18 T 23-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DLM_3441 5390d3664c7a2ca306d2c95f869d4f30 465 Pfam PF01565 FAD binding domain 39 178 4.7E-33 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Gene3D G3DSA:3.40.50.10050 778 884 2.3E-38 T 23-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 92 3.3E-6 T 23-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 SUPERFAMILY SSF52540 477 650 1.62E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Gene3D G3DSA:2.40.30.10 653 771 5.5E-38 T 23-10-2018 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 403 454 3.6E-14 T 23-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 4 52 1.4E-7 T 23-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 484 639 1.2E-31 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Gene3D G3DSA:3.40.50.300 479 652 2.3E-70 T 23-10-2018 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 SUPERFAMILY SSF46955 4 51 6.96E-10 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Pfam PF11987 Translation-initiation factor 2 766 873 2.5E-37 T 23-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 ProSitePatterns PS01176 Initiation factor 2 signature. 934 956 - T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 5 981 17.646 T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 398 982 9.4E-260 T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 SUPERFAMILY SSF50447 654 735 1.02E-24 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 SUPERFAMILY SSF52156 760 890 2.09E-37 T 23-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 SUPERFAMILY SSF50447 885 981 3.73E-33 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Gene3D G3DSA:2.40.30.10 885 982 2.7E-33 T 23-10-2018 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Pfam PF00009 Elongation factor Tu GTP binding domain 486 642 3.6E-34 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_2571 e980ce69d2af3fa4aa19cf4243010e4f 983 Gene3D G3DSA:3.30.56.50 4 51 5.3E-8 T 23-10-2018 DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 PIRSF PIRSF004491 1 286 2.8E-87 T 23-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 SMART SM00904 155 279 7.4E-53 T 23-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 SUPERFAMILY SSF82114 146 280 7.85E-40 T 23-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 Pfam PF01687 Riboflavin kinase 156 278 2.2E-34 T 23-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 Gene3D G3DSA:3.40.50.620 1 158 8.7E-47 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 1 278 6.4E-77 T 23-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 Pfam PF06574 FAD synthetase 1 138 7.7E-41 T 23-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 SUPERFAMILY SSF52374 1 147 3.52E-25 T 23-10-2018 DLM_3061 2e56a78f9de699a2f24031662e5ecbea 286 Gene3D G3DSA:2.40.30.30 160 285 6.8E-38 T 23-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DLM_0037 534cad2bcaeb7c9fbd2fe7e0144da3a5 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 4.2E-53 T 23-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 DLM_0037 534cad2bcaeb7c9fbd2fe7e0144da3a5 127 SUPERFAMILY SSF55298 1 126 1.73E-46 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_0037 534cad2bcaeb7c9fbd2fe7e0144da3a5 127 Gene3D G3DSA:3.30.1330.40 1 127 6.3E-53 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_0037 534cad2bcaeb7c9fbd2fe7e0144da3a5 127 Pfam PF01042 Endoribonuclease L-PSP 9 123 2.3E-41 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DLM_0541 ed01f733e4a92eda8149a670d6e5e41b 106 SUPERFAMILY SSF69118 8 100 7.2E-27 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DLM_0541 ed01f733e4a92eda8149a670d6e5e41b 106 Pfam PF02627 Carboxymuconolactone decarboxylase family 19 99 1.3E-20 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DLM_0541 ed01f733e4a92eda8149a670d6e5e41b 106 Gene3D G3DSA:1.20.1290.10 4 105 8.9E-31 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DLM_1058 8497b3743dabbe557a430d3836011a01 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 8.0E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1058 8497b3743dabbe557a430d3836011a01 229 SUPERFAMILY SSF48498 98 227 4.89E-30 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_1058 8497b3743dabbe557a430d3836011a01 229 ProSitePatterns PS01081 TetR-type HTH domain signature. 40 70 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DLM_1058 8497b3743dabbe557a430d3836011a01 229 SUPERFAMILY SSF46689 17 95 6.67E-18 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1058 8497b3743dabbe557a430d3836011a01 229 Gene3D G3DSA:1.10.357.10 26 227 8.3E-61 T 23-10-2018 DLM_1058 8497b3743dabbe557a430d3836011a01 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 2.9E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1058 8497b3743dabbe557a430d3836011a01 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 2.9E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1393 c6eb1619c43fcbcfb2d96d302a01d7d6 270 Gene3D G3DSA:1.10.3720.10 58 266 8.4E-23 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1393 c6eb1619c43fcbcfb2d96d302a01d7d6 270 SUPERFAMILY SSF161098 63 249 2.75E-25 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1393 c6eb1619c43fcbcfb2d96d302a01d7d6 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 267 3.3E-30 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1343 3d085d3a5a7774476440dd2b8fea8b7f 227 Pfam PF12840 Helix-turn-helix domain 12 71 6.3E-9 T 23-10-2018 DLM_1343 3d085d3a5a7774476440dd2b8fea8b7f 227 Gene3D G3DSA:1.10.10.10 1 97 4.2E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1343 3d085d3a5a7774476440dd2b8fea8b7f 227 SUPERFAMILY SSF46785 6 91 4.75E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1343 3d085d3a5a7774476440dd2b8fea8b7f 227 SMART SM00418 12 91 1.3E-14 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_2981 b4496a4f025b6613e1cb9c155859279e 203 SUPERFAMILY SSF48498 81 195 2.37E-20 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_2981 b4496a4f025b6613e1cb9c155859279e 203 SUPERFAMILY SSF46689 3 77 1.95E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2981 b4496a4f025b6613e1cb9c155859279e 203 Gene3D G3DSA:1.10.357.10 2 198 4.2E-59 T 23-10-2018 DLM_2981 b4496a4f025b6613e1cb9c155859279e 203 Pfam PF16925 Bacterial transcriptional repressor C-terminal 104 186 7.9E-9 T 23-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DLM_2981 b4496a4f025b6613e1cb9c155859279e 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 55 1.7E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 Gene3D G3DSA:3.30.70.270 251 342 3.9E-32 T 23-10-2018 DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 SMART SM00086 206 249 1.3E-5 T 23-10-2018 IPR001610 PAC motif DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 SMART SM00086 77 119 0.28 T 23-10-2018 IPR001610 PAC motif DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 Gene3D G3DSA:3.30.450.20 1 136 8.0E-25 T 23-10-2018 DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 SMART SM00267 248 345 4.4E-7 T 23-10-2018 IPR000160 GGDEF domain DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 SMART SM00091 131 199 50.0 T 23-10-2018 IPR000014 PAS domain DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 SMART SM00091 4 71 2.1E-9 T 23-10-2018 IPR000014 PAS domain DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 254 9.2E-7 T 23-10-2018 IPR000014 PAS domain DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 126 9.4E-15 T 23-10-2018 IPR000014 PAS domain DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 Pfam PF08447 PAS fold 156 243 2.1E-17 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 Pfam PF13426 PAS domain 16 116 6.6E-11 T 23-10-2018 IPR000014 PAS domain DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 SUPERFAMILY SSF55073 265 340 1.18E-26 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 SUPERFAMILY SSF55785 116 247 4.19E-16 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 SUPERFAMILY SSF55785 16 128 8.55E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 259 340 2.2E-27 T 23-10-2018 IPR000160 GGDEF domain DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 340 2.5E-29 T 23-10-2018 IPR000160 GGDEF domain DLM_2945 3f42a4aeb2465f78928abc289711da7f 345 Gene3D G3DSA:3.30.450.20 141 250 1.2E-20 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 13 241 1.0E-61 T 23-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 517 751 5.0E-75 T 23-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Gene3D G3DSA:1.20.120.1510 416 526 3.4E-22 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 SUPERFAMILY SSF81301 490 762 8.5E-81 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 4 889 19.317 T 23-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Pfam PF08335 GlnD PII-uridylyltransferase 267 406 6.2E-48 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Pfam PF08335 GlnD PII-uridylyltransferase 775 860 4.3E-13 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Gene3D G3DSA:1.20.120.330 759 889 1.1E-36 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 SUPERFAMILY SSF81593 257 406 5.96E-45 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 SUPERFAMILY SSF81593 763 888 4.32E-30 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Gene3D G3DSA:1.20.120.330 255 408 2.8E-55 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 SUPERFAMILY SSF81301 12 256 6.54E-69 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Gene3D G3DSA:3.30.460.100 10 250 9.6E-64 T 23-10-2018 DLM_2280 ec73220249d7658545a0a9e5a85b54a2 893 Gene3D G3DSA:3.30.460.100 527 758 7.5E-80 T 23-10-2018 DLM_2383 20cb315092e11a883995545800e0fb2c 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 214 3.8E-18 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2383 20cb315092e11a883995545800e0fb2c 224 Gene3D G3DSA:3.40.50.12740 4 216 7.1E-47 T 23-10-2018 DLM_2383 20cb315092e11a883995545800e0fb2c 224 Pfam PF00072 Response regulator receiver domain 6 118 1.3E-20 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2383 20cb315092e11a883995545800e0fb2c 224 SMART SM00421 157 214 3.7E-19 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2383 20cb315092e11a883995545800e0fb2c 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2383 20cb315092e11a883995545800e0fb2c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 8.4E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2383 20cb315092e11a883995545800e0fb2c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 8.4E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2383 20cb315092e11a883995545800e0fb2c 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 8.4E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2383 20cb315092e11a883995545800e0fb2c 224 SUPERFAMILY SSF46894 145 214 3.74E-17 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_2383 20cb315092e11a883995545800e0fb2c 224 SMART SM00448 4 118 6.9E-16 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2383 20cb315092e11a883995545800e0fb2c 224 SUPERFAMILY SSF52172 3 130 4.41E-24 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2966 9b5e7bd6abbb92d896bde01d43ac1f91 708 SUPERFAMILY SSF56935 40 708 2.81E-97 T 23-10-2018 DLM_2966 9b5e7bd6abbb92d896bde01d43ac1f91 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 169 2.8E-18 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_2966 9b5e7bd6abbb92d896bde01d43ac1f91 708 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 40 708 1.9E-117 T 23-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 DLM_2966 9b5e7bd6abbb92d896bde01d43ac1f91 708 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 38 708 5.4E-114 T 23-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 DLM_2966 9b5e7bd6abbb92d896bde01d43ac1f91 708 Pfam PF00593 TonB dependent receptor 282 705 3.3E-46 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DLM_2966 9b5e7bd6abbb92d896bde01d43ac1f91 708 Gene3D G3DSA:2.40.170.20 185 708 1.3E-95 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_2966 9b5e7bd6abbb92d896bde01d43ac1f91 708 Gene3D G3DSA:2.170.130.10 39 174 5.8E-28 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 Pfam PF00072 Response regulator receiver domain 5 113 1.7E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 SMART SM00448 2 115 8.4E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.2E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.2E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.2E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 SUPERFAMILY SSF46894 139 207 7.48E-21 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 SMART SM00421 145 202 1.8E-20 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 Gene3D G3DSA:1.10.10.10 136 207 2.3E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 4.2E-21 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 SUPERFAMILY SSF52172 2 128 6.12E-29 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2783 9b0f845c793290e43ad4adb17fb9cd87 208 Gene3D G3DSA:3.40.50.2300 3 135 1.1E-29 T 23-10-2018 DLM_3184 4f5151a77629aeeeb1aed29c60dc95ce 79 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.5E-24 T 23-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain DLM_3184 4f5151a77629aeeeb1aed29c60dc95ce 79 Pfam PF09723 Zinc ribbon domain 1 40 1.5E-16 T 23-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain DLM_3184 4f5151a77629aeeeb1aed29c60dc95ce 79 SMART SM00834 1 42 2.7E-20 T 23-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain DLM_0642 a9b657ee3bdf0f0ac98cf2210b4a8ea4 280 PIRSF PIRSF006250 4 280 1.2E-92 T 23-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 DLM_0642 a9b657ee3bdf0f0ac98cf2210b4a8ea4 280 SUPERFAMILY SSF51690 112 278 7.46E-57 T 23-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DLM_0642 a9b657ee3bdf0f0ac98cf2210b4a8ea4 280 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 278 3.0E-93 T 23-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 DLM_0642 a9b657ee3bdf0f0ac98cf2210b4a8ea4 280 SUPERFAMILY SSF54675 7 110 8.24E-29 T 23-10-2018 DLM_0642 a9b657ee3bdf0f0ac98cf2210b4a8ea4 280 Gene3D G3DSA:3.20.20.70 121 268 6.4E-109 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0642 a9b657ee3bdf0f0ac98cf2210b4a8ea4 280 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 112 277 1.5E-54 T 23-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 DLM_0642 a9b657ee3bdf0f0ac98cf2210b4a8ea4 280 Gene3D G3DSA:3.90.1170.20 10 277 6.4E-109 T 23-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 DLM_0642 a9b657ee3bdf0f0ac98cf2210b4a8ea4 280 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 110 2.0E-24 T 23-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 DLM_1166 d8555729222a530efdf77aad07c772b1 281 SUPERFAMILY SSF161098 9 265 3.08E-49 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1166 d8555729222a530efdf77aad07c772b1 281 Gene3D G3DSA:1.10.3720.10 15 269 1.1E-43 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1166 d8555729222a530efdf77aad07c772b1 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 265 8.3E-14 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3372 509544f701faefd345128717849dad67 354 Gene3D G3DSA:3.90.25.10 200 331 6.4E-133 T 23-10-2018 DLM_3372 509544f701faefd345128717849dad67 354 SUPERFAMILY SSF51735 2 349 1.58E-89 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3372 509544f701faefd345128717849dad67 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 3.7E-101 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_3372 509544f701faefd345128717849dad67 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 336 7.8E-156 T 23-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DLM_3372 509544f701faefd345128717849dad67 354 Gene3D G3DSA:3.40.50.720 2 322 6.4E-133 T 23-10-2018 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 114 124 - T 23-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 PIRSF PIRSF500176 29 358 2.1E-78 T 23-10-2018 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 PIRSF PIRSF001220 27 358 9.9E-89 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 14 358 2.7E-137 T 23-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 SUPERFAMILY SSF53774 31 357 3.66E-101 T 23-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 Gene3D G3DSA:3.40.50.1170 28 244 2.2E-85 T 23-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 Pfam PF00710 Asparaginase, N-terminal 32 224 6.2E-60 T 23-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 Gene3D G3DSA:3.40.50.40 245 357 4.9E-40 T 23-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 SMART SM00870 32 352 3.4E-137 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 35 43 - T 23-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 PRINTS PR00139 Asparaginase/glutaminase family signature 33 44 7.7E-24 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 PRINTS PR00139 Asparaginase/glutaminase family signature 292 310 7.7E-24 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0138 7122c9a9cb118e967ae1e91fbb798cee 358 PRINTS PR00139 Asparaginase/glutaminase family signature 113 131 7.7E-24 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 1.1E-156 T 23-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Gene3D G3DSA:1.10.10.10 333 515 1.8E-51 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Pfam PF00270 DEAD/DEAH box helicase 21 179 6.8E-18 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 SMART SM00341 522 596 2.8E-14 T 23-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 SMART SM00487 13 209 4.0E-31 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 SMART SM00490 242 323 2.9E-25 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 SUPERFAMILY SSF52540 6 189 7.61E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 SUPERFAMILY SSF52540 199 451 3.54E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Pfam PF09382 RQC domain 398 509 4.6E-38 T 23-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Gene3D G3DSA:3.40.50.300 1 199 1.1E-80 T 23-10-2018 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Pfam PF00271 Helicase conserved C-terminal domain 216 322 8.6E-16 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Gene3D G3DSA:1.10.150.80 516 597 8.5E-22 T 23-10-2018 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 591 1.2E-250 T 23-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 SMART SM00956 403 506 7.4E-50 T 23-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Gene3D G3DSA:3.40.50.300 200 332 1.1E-40 T 23-10-2018 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Pfam PF16124 RecQ zinc-binding 335 396 7.7E-20 T 23-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 Pfam PF00570 HRDC domain 526 591 3.5E-20 T 23-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DLM_4503 c01086270bec03842a6ffa90fafdc23c 597 SUPERFAMILY SSF47819 518 593 5.98E-21 T 23-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 SUPERFAMILY SSF50692 560 709 5.42E-42 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DLM_1922 3743438bef0b54a35000f0c45ae09114 905 PIRSF PIRSF036643 1 726 1.8E-162 T 23-10-2018 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Pfam PF04324 BFD-like [2Fe-2S] binding domain 852 897 2.4E-6 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Pfam PF01568 Molydopterin dinucleotide binding domain 593 703 8.4E-26 T 23-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 11 28 - T 23-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 8 57 3.1E-18 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 440 457 - T 23-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Gene3D G3DSA:3.40.50.740 75 548 7.4E-193 T 23-10-2018 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Gene3D G3DSA:2.20.25.90 3 60 1.6E-17 T 23-10-2018 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 SUPERFAMILY SSF53706 5 580 1.7E-194 T 23-10-2018 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 SMART SM00926 6 61 1.6E-19 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Gene3D G3DSA:1.10.10.1100 852 903 5.5E-7 T 23-10-2018 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Gene3D G3DSA:3.40.228.10 144 345 7.4E-193 T 23-10-2018 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Gene3D G3DSA:2.40.40.20 583 710 6.4E-40 T 23-10-2018 DLM_1922 3743438bef0b54a35000f0c45ae09114 905 Pfam PF00384 Molybdopterin oxidoreductase 66 494 2.0E-83 T 23-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 SUPERFAMILY SSF58104 236 536 2.88E-63 T 23-10-2018 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 502 2.3E-40 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 4.2E-24 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 4.2E-24 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 23 4.2E-24 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 Gene3D G3DSA:1.10.287.950 216 536 3.9E-64 T 23-10-2018 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 Pfam PF17200 Single Cache domain 2 34 180 3.1E-27 T 23-10-2018 IPR033480 Single Cache domain 2 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 SMART SM01049 30 122 3.4E-18 T 23-10-2018 IPR033480 Single Cache domain 2 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 Gene3D G3DSA:3.30.450.20 28 181 1.5E-28 T 23-10-2018 DLM_4234 a21757ac20003c7b757348c8b5d98afe 536 SMART SM00283 274 535 6.4E-56 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0233 e19069f41137b45ab2238cc122fe4179 435 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 6 435 1.8E-171 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DLM_0233 e19069f41137b45ab2238cc122fe4179 435 Pfam PF00583 Acetyltransferase (GNAT) family 329 396 3.4E-7 T 23-10-2018 IPR000182 GNAT domain DLM_0233 e19069f41137b45ab2238cc122fe4179 435 PIRSF PIRSF000423 1 435 9.3E-181 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DLM_0233 e19069f41137b45ab2238cc122fe4179 435 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 435 191.606 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DLM_0233 e19069f41137b45ab2238cc122fe4179 435 SUPERFAMILY SSF53633 5 286 9.49E-63 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_0233 e19069f41137b45ab2238cc122fe4179 435 SUPERFAMILY SSF55729 290 412 3.78E-16 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_0233 e19069f41137b45ab2238cc122fe4179 435 Gene3D G3DSA:3.40.1160.10 4 288 2.9E-84 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_0233 e19069f41137b45ab2238cc122fe4179 435 Pfam PF00696 Amino acid kinase family 23 256 8.1E-22 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DLM_0233 e19069f41137b45ab2238cc122fe4179 435 Gene3D G3DSA:3.40.630.30 289 435 1.1E-35 T 23-10-2018 DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 2 622 49.999 T 23-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 238 1.3E-42 T 23-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 Gene3D G3DSA:3.30.1390.30 84 159 2.0E-47 T 23-10-2018 DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 SUPERFAMILY SSF56519 55 251 8.5E-50 T 23-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 619 1.4E-229 T 23-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 Gene3D G3DSA:3.90.1310.10 63 246 2.0E-47 T 23-10-2018 DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 Pfam PF00905 Penicillin binding protein transpeptidase domain 270 613 1.3E-73 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 SUPERFAMILY SSF56601 253 619 3.64E-100 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DLM_4179 f62a7f0cf8a3c0345d157e2d8559fa2b 646 Gene3D G3DSA:3.40.710.10 247 624 1.2E-99 T 23-10-2018 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 Pfam PF00067 Cytochrome P450 271 370 5.6E-15 T 23-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 341 350 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 273 284 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 292 319 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 89 100 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 191 213 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 350 361 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 136 152 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 153 168 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 PRINTS PR00359 B-class P450 signature 320 335 1.6E-29 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 23-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 Gene3D G3DSA:1.10.630.10 16 402 2.7E-85 T 23-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DLM_1347 41df733ae5fdfeb7760158db924c07a1 405 SUPERFAMILY SSF48264 14 400 2.88E-71 T 23-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DLM_4012 1f40ee7e9bdde04ec2b4cc06aa968531 106 Pfam PF01491 Frataxin-like domain 1 99 2.0E-22 T 23-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_4012 1f40ee7e9bdde04ec2b4cc06aa968531 106 SMART SM01219 1 103 1.1E-40 T 23-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_4012 1f40ee7e9bdde04ec2b4cc06aa968531 106 SUPERFAMILY SSF55387 1 99 2.62E-30 T 23-10-2018 DLM_4012 1f40ee7e9bdde04ec2b4cc06aa968531 106 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 22.969 T 23-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_4012 1f40ee7e9bdde04ec2b4cc06aa968531 106 Gene3D G3DSA:3.30.920.10 1 104 1.5E-32 T 23-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_4012 1f40ee7e9bdde04ec2b4cc06aa968531 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 99 1.1E-32 T 23-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_4012 1f40ee7e9bdde04ec2b4cc06aa968531 106 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 23-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DLM_1099 9420accdadceccfcd7956a91888cfe98 393 Gene3D G3DSA:2.40.30.10 190 338 7.9E-124 T 23-10-2018 DLM_1099 9420accdadceccfcd7956a91888cfe98 393 Gene3D G3DSA:3.50.50.60 7 390 7.9E-124 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1099 9420accdadceccfcd7956a91888cfe98 393 SUPERFAMILY SSF51905 1 392 2.36E-53 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1099 9420accdadceccfcd7956a91888cfe98 393 SUPERFAMILY SSF160996 191 339 9.68E-39 T 23-10-2018 DLM_1099 9420accdadceccfcd7956a91888cfe98 393 Gene3D G3DSA:1.10.8.260 263 321 7.9E-124 T 23-10-2018 IPR023166 HI0933-like insert domain superfamily DLM_1099 9420accdadceccfcd7956a91888cfe98 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 1.3E-7 T 23-10-2018 DLM_1099 9420accdadceccfcd7956a91888cfe98 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 1.3E-7 T 23-10-2018 DLM_1099 9420accdadceccfcd7956a91888cfe98 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.3E-7 T 23-10-2018 DLM_1099 9420accdadceccfcd7956a91888cfe98 393 Pfam PF03486 HI0933-like protein 5 391 3.1E-140 T 23-10-2018 DLM_1099 9420accdadceccfcd7956a91888cfe98 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 391 3.4E-120 T 23-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DLM_1099 9420accdadceccfcd7956a91888cfe98 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.8E-5 T 23-10-2018 DLM_1099 9420accdadceccfcd7956a91888cfe98 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 8.8E-5 T 23-10-2018 DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 Gene3D G3DSA:3.30.160.20 3 75 1.1E-25 T 23-10-2018 DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 23-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 77 3.7E-25 T 23-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 159 2.1E-28 T 23-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 13 165 1.7E-59 T 23-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 SUPERFAMILY SSF54768 10 78 3.56E-21 T 23-10-2018 DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 Gene3D G3DSA:3.30.230.10 76 169 7.9E-35 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 SUPERFAMILY SSF54211 81 160 2.78E-25 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_4409 86725d17e6520dde3e48a1787b96cdcb 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 32.252 T 23-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DLM_1499 4e74edcab180422b3b0a7e864796c8fe 516 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 1.3E-175 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DLM_1499 4e74edcab180422b3b0a7e864796c8fe 516 PIRSF PIRSF006446 354 514 4.0E-35 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DLM_1499 4e74edcab180422b3b0a7e864796c8fe 516 PIRSF PIRSF006446 1 326 2.6E-114 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DLM_0213 23689a3dc5ad83dabec96fb7878e61fb 157 SMART SM00448 38 151 2.3E-35 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0213 23689a3dc5ad83dabec96fb7878e61fb 157 SUPERFAMILY SSF52172 38 156 3.27E-38 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0213 23689a3dc5ad83dabec96fb7878e61fb 157 Pfam PF00072 Response regulator receiver domain 40 151 2.7E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0213 23689a3dc5ad83dabec96fb7878e61fb 157 Gene3D G3DSA:3.40.50.12740 36 157 2.8E-38 T 23-10-2018 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 SUPERFAMILY SSF55190 4 96 1.29E-21 T 23-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 SUPERFAMILY SSF52374 103 448 1.13E-93 T 23-10-2018 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 116 127 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 SUPERFAMILY SSF47323 448 567 1.83E-35 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 2.0E-27 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 139 2.0E-27 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 147 160 2.0E-27 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 108 123 2.0E-27 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 2 81 6.9E-23 T 23-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 SMART SM00836 454 567 2.0E-37 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 Gene3D G3DSA:3.30.1360.70 1 100 9.3E-30 T 23-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 Gene3D G3DSA:1.10.730.10 448 567 4.7E-33 T 23-10-2018 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 Gene3D G3DSA:3.40.50.620 102 447 7.8E-115 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 Pfam PF05746 DALR anticodon binding domain 454 567 7.8E-32 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 Pfam PF00750 tRNA synthetases class I (R) 95 440 3.3E-138 T 23-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 2 567 3.4E-179 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 Hamap MF_00123 Arginine--tRNA ligase [argS]. 4 567 27.557 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DLM_1169 b521c7aba88ea1f70b89727a98cd80bb 567 SMART SM01016 1 81 8.0E-28 T 23-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.9E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.9E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.9E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 149 2.6E-4 T 23-10-2018 DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.2E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.2E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.2E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 Gene3D G3DSA:3.40.50.720 2 251 1.1E-74 T 23-10-2018 DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 3.9E-56 T 23-10-2018 DLM_2824 f9a482f38884c96b65039ff8e0e0f8c1 252 SUPERFAMILY SSF51735 6 251 4.97E-74 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1685 bd2c35b52bb84c09e4c8ff4e6066a074 308 Gene3D G3DSA:3.40.50.2300 38 283 2.3E-34 T 23-10-2018 DLM_1685 bd2c35b52bb84c09e4c8ff4e6066a074 308 Pfam PF13407 Periplasmic binding protein domain 32 283 9.1E-24 T 23-10-2018 IPR025997 Periplasmic binding protein DLM_1685 bd2c35b52bb84c09e4c8ff4e6066a074 308 SUPERFAMILY SSF53822 32 302 1.5E-34 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1685 bd2c35b52bb84c09e4c8ff4e6066a074 308 Gene3D G3DSA:3.40.50.2300 130 267 2.3E-34 T 23-10-2018 DLM_0558 36c0c8e8c7c9d3d80f231b36f213f72a 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 329 3.0E-46 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 Pfam PF13167 GTP-binding GTPase N-terminal 30 134 1.6E-28 T 23-10-2018 IPR025121 GTPase HflX, N-terminal DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 Gene3D G3DSA:3.40.50.11060 22 163 1.2E-35 T 23-10-2018 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 Gene3D G3DSA:3.40.50.300 226 397 1.9E-35 T 23-10-2018 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 Hamap MF_00900 GTPase HflX [hflX]. 32 419 45.847 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 249 3.6E-7 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 250 268 3.6E-7 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 278 293 3.6E-7 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 PIRSF PIRSF006809 3 448 1.2E-144 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 Pfam PF16360 GTP-binding GTPase Middle Region 138 218 1.4E-19 T 23-10-2018 IPR032305 GTP-binding protein, middle domain DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 387 1.7E-110 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 Pfam PF01926 50S ribosome-binding GTPase 229 347 1.9E-18 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_1834 9fe00d67e60b6a051a7bf6436c6e6406 460 SUPERFAMILY SSF52540 229 407 5.36E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2570 7f37dfc7c67ff0dc124ddfa9fa1a9364 167 ProSitePatterns PS01319 Ribosome-binding factor A signature. 105 126 - T 23-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 DLM_2570 7f37dfc7c67ff0dc124ddfa9fa1a9364 167 SUPERFAMILY SSF89919 34 142 3.4E-33 T 23-10-2018 IPR023799 Ribosome-binding factor A domain superfamily DLM_2570 7f37dfc7c67ff0dc124ddfa9fa1a9364 167 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 39 126 6.0E-38 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DLM_2570 7f37dfc7c67ff0dc124ddfa9fa1a9364 167 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 36 144 1.4E-30 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DLM_2570 7f37dfc7c67ff0dc124ddfa9fa1a9364 167 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 36 139 26.482 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DLM_2570 7f37dfc7c67ff0dc124ddfa9fa1a9364 167 Gene3D G3DSA:3.30.300.20 35 148 1.0E-33 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_2570 7f37dfc7c67ff0dc124ddfa9fa1a9364 167 Pfam PF02033 Ribosome-binding factor A 37 139 8.8E-32 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DLM_1854 25dd623ed0c668335c87de961cf040ee 215 SMART SM00895 81 205 2.7E-19 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1854 25dd623ed0c668335c87de961cf040ee 215 Gene3D G3DSA:1.10.10.10 5 73 3.6E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1854 25dd623ed0c668335c87de961cf040ee 215 SUPERFAMILY SSF48008 79 211 3.66E-26 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1854 25dd623ed0c668335c87de961cf040ee 215 Gene3D G3DSA:1.20.120.530 74 211 7.9E-27 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1854 25dd623ed0c668335c87de961cf040ee 215 Pfam PF07729 FCD domain 81 201 1.0E-26 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1854 25dd623ed0c668335c87de961cf040ee 215 SUPERFAMILY SSF46785 4 75 1.46E-12 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1854 25dd623ed0c668335c87de961cf040ee 215 SMART SM00345 13 71 3.7E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1854 25dd623ed0c668335c87de961cf040ee 215 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 1.2E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_4083 7e9f8f190f5fe61959ea2989550f4ddc 337 SUPERFAMILY SSF46626 26 181 6.6E-48 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4083 7e9f8f190f5fe61959ea2989550f4ddc 337 Gene3D G3DSA:1.10.760.10 44 317 2.0E-113 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4083 7e9f8f190f5fe61959ea2989550f4ddc 337 Pfam PF00034 Cytochrome c 202 311 1.9E-8 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_4083 7e9f8f190f5fe61959ea2989550f4ddc 337 PIRSF PIRSF000294 4 335 1.6E-127 T 23-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 DLM_4083 7e9f8f190f5fe61959ea2989550f4ddc 337 SUPERFAMILY SSF46626 180 330 2.32E-41 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4083 7e9f8f190f5fe61959ea2989550f4ddc 337 Gene3D G3DSA:1.10.760.10 46 193 2.0E-113 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4083 7e9f8f190f5fe61959ea2989550f4ddc 337 Pfam PF03150 Di-haem cytochrome c peroxidase 46 193 3.3E-51 T 23-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 DLM_2067 0706e24045b3be9cdae3597fc1e1f6a4 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 6.9E-8 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_2067 0706e24045b3be9cdae3597fc1e1f6a4 131 SUPERFAMILY SSF54593 1 126 5.91E-24 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2067 0706e24045b3be9cdae3597fc1e1f6a4 131 Gene3D G3DSA:3.10.180.10 6 130 6.2E-35 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_3604 babbab723163b3275063d193516b19e7 926 Gene3D G3DSA:1.10.150.20 707 850 9.2E-110 T 23-10-2018 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 653 675 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 873 886 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 811 822 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 728 741 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 789 800 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 698 721 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 843 859 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 676 691 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 752 777 1.4E-75 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 Gene3D G3DSA:3.40.50.1010 1 271 9.1E-90 T 23-10-2018 DLM_3604 babbab723163b3275063d193516b19e7 926 Gene3D G3DSA:3.30.420.10 326 538 4.5E-66 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_3604 babbab723163b3275063d193516b19e7 926 ProSitePatterns PS00447 DNA polymerase family A signature. 752 771 - T 23-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 Pfam PF00476 DNA polymerase family A 546 923 2.1E-154 T 23-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 SMART SM00474 329 515 3.3E-32 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DLM_3604 babbab723163b3275063d193516b19e7 926 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 1 160 1.7E-51 T 23-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DLM_3604 babbab723163b3275063d193516b19e7 926 Gene3D G3DSA:3.30.70.370 663 922 9.2E-110 T 23-10-2018 DLM_3604 babbab723163b3275063d193516b19e7 926 SUPERFAMILY SSF88723 1 160 2.55E-54 T 23-10-2018 IPR029060 PIN-like domain superfamily DLM_3604 babbab723163b3275063d193516b19e7 926 SMART SM00279 163 198 2.7E-11 T 23-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DLM_3604 babbab723163b3275063d193516b19e7 926 SMART SM00475 1 248 1.9E-111 T 23-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DLM_3604 babbab723163b3275063d193516b19e7 926 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 161 244 4.4E-25 T 23-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DLM_3604 babbab723163b3275063d193516b19e7 926 Pfam PF01612 3'-5' exonuclease 329 514 5.8E-38 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DLM_3604 babbab723163b3275063d193516b19e7 926 SUPERFAMILY SSF47807 161 278 1.38E-30 T 23-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DLM_3604 babbab723163b3275063d193516b19e7 926 Gene3D G3DSA:1.10.150.20 164 236 9.1E-90 T 23-10-2018 DLM_3604 babbab723163b3275063d193516b19e7 926 SMART SM00482 684 890 4.5E-116 T 23-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 SUPERFAMILY SSF56672 520 926 7.0E-156 T 23-10-2018 DLM_3604 babbab723163b3275063d193516b19e7 926 TIGRFAM TIGR00593 pola: DNA polymerase I 1 926 2.1E-283 T 23-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3604 babbab723163b3275063d193516b19e7 926 SUPERFAMILY SSF53098 332 514 6.75E-55 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_3604 babbab723163b3275063d193516b19e7 926 Gene3D G3DSA:1.20.1060.10 539 656 9.3E-42 T 23-10-2018 DLM_4159 6506fcd19b44920efbc09a0ac73754f3 203 SUPERFAMILY SSF46626 24 104 1.06E-23 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4159 6506fcd19b44920efbc09a0ac73754f3 203 Pfam PF00034 Cytochrome c 135 201 6.7E-7 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_4159 6506fcd19b44920efbc09a0ac73754f3 203 Pfam PF00034 Cytochrome c 30 105 1.7E-11 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_4159 6506fcd19b44920efbc09a0ac73754f3 203 Gene3D G3DSA:1.10.760.10 30 105 1.7E-26 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4159 6506fcd19b44920efbc09a0ac73754f3 203 Gene3D G3DSA:1.10.760.10 110 203 2.6E-23 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4159 6506fcd19b44920efbc09a0ac73754f3 203 PIRSF PIRSF000005 1 203 3.4E-64 T 23-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 DLM_4159 6506fcd19b44920efbc09a0ac73754f3 203 SUPERFAMILY SSF46626 115 201 1.89E-18 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 SMART SM00100 10 133 1.9E-4 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 Gene3D G3DSA:1.10.10.10 144 216 2.7E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 SUPERFAMILY SSF46785 148 216 3.91E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 Gene3D G3DSA:2.60.120.10 2 143 1.1E-42 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 Pfam PF00027 Cyclic nucleotide-binding domain 30 117 9.0E-11 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 Pfam PF13545 Crp-like helix-turn-helix domain 150 215 9.9E-16 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 SMART SM00419 160 208 7.5E-12 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 SUPERFAMILY SSF51206 7 145 3.14E-27 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 9.3E-5 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_4066 a6d85e84f937120b8176d0b8cee1d08b 218 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 9.3E-5 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_0271 5a19b46aa9e5db8135ec18201c1be14c 335 Pfam PF00248 Aldo/keto reductase family 16 310 1.4E-68 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain DLM_0271 5a19b46aa9e5db8135ec18201c1be14c 335 SUPERFAMILY SSF51430 1 310 2.1E-90 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_0271 5a19b46aa9e5db8135ec18201c1be14c 335 Gene3D G3DSA:3.20.20.100 1 326 1.0E-104 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 296 361 3.0E-11 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 Gene3D G3DSA:3.10.20.30 265 369 5.3E-25 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 SUPERFAMILY SSF63380 23 126 2.94E-30 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 Pfam PF00175 Oxidoreductase NAD-binding domain 135 241 2.6E-13 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 Gene3D G3DSA:2.40.30.10 23 124 1.2E-27 T 23-10-2018 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 SUPERFAMILY SSF52343 114 257 5.24E-37 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 SUPERFAMILY SSF54292 250 368 2.1E-25 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 Gene3D G3DSA:3.40.50.80 125 264 2.5E-32 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 Pfam PF00970 Oxidoreductase FAD-binding domain 31 125 9.7E-18 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 319 327 - T 23-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 134 153 3.9E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 74 81 3.9E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 171 182 3.9E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 65 3.9E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00406 Cytochrome B5 reductase signature 111 125 2.1E-11 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00406 Cytochrome B5 reductase signature 74 81 2.1E-11 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00406 Cytochrome B5 reductase signature 171 182 2.1E-11 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00406 Cytochrome B5 reductase signature 134 153 2.1E-11 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DLM_3252 ffdf2f733a0591fef4a5293cb029b220 369 PRINTS PR00406 Cytochrome B5 reductase signature 227 235 2.1E-11 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DLM_3260 7e90c703137fa91be985d2315214b6a7 311 Gene3D G3DSA:3.40.50.1820 1 280 3.9E-40 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3260 7e90c703137fa91be985d2315214b6a7 311 Pfam PF12146 Serine aminopeptidase, S33 24 240 1.4E-19 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 DLM_3260 7e90c703137fa91be985d2315214b6a7 311 SUPERFAMILY SSF53474 5 275 2.77E-41 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 214 4.4E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 233 4.4E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 126 4.4E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 245 265 4.4E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 4.4E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 42 59 4.4E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0926 921df53866f9c898edb02c79606d61c8 288 Gene3D G3DSA:3.40.50.720 19 287 3.6E-71 T 23-10-2018 DLM_0926 921df53866f9c898edb02c79606d61c8 288 SUPERFAMILY SSF51735 37 279 2.1E-68 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0926 921df53866f9c898edb02c79606d61c8 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 47 279 8.5E-57 T 23-10-2018 DLM_0926 921df53866f9c898edb02c79606d61c8 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 182 210 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 1.1E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 214 1.1E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0926 921df53866f9c898edb02c79606d61c8 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 126 1.1E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1711 96883a37ebe0c321cb7547478ce85f90 222 SUPERFAMILY SSF46785 10 79 1.15E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1711 96883a37ebe0c321cb7547478ce85f90 222 SUPERFAMILY SSF48008 81 208 5.23E-21 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1711 96883a37ebe0c321cb7547478ce85f90 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 70 3.7E-14 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1711 96883a37ebe0c321cb7547478ce85f90 222 SMART SM00345 17 75 4.2E-8 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1711 96883a37ebe0c321cb7547478ce85f90 222 SMART SM00895 85 207 3.8E-15 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1711 96883a37ebe0c321cb7547478ce85f90 222 Pfam PF07729 FCD domain 85 203 2.7E-21 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1711 96883a37ebe0c321cb7547478ce85f90 222 Gene3D G3DSA:1.10.10.10 10 76 1.6E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1711 96883a37ebe0c321cb7547478ce85f90 222 Gene3D G3DSA:1.20.120.530 80 209 1.2E-23 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_2270 b66d5e488e5e5c5db69b18eeca7cbb6f 235 Gene3D G3DSA:1.10.286.10 13 98 5.0E-8 T 23-10-2018 DLM_2270 b66d5e488e5e5c5db69b18eeca7cbb6f 235 SUPERFAMILY SSF55620 15 232 2.82E-65 T 23-10-2018 DLM_2270 b66d5e488e5e5c5db69b18eeca7cbb6f 235 Gene3D G3DSA:3.30.1130.10 99 234 7.6E-43 T 23-10-2018 DLM_2270 b66d5e488e5e5c5db69b18eeca7cbb6f 235 Pfam PF01227 GTP cyclohydrolase I 52 231 2.1E-53 T 23-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DLM_3271 9275f1c1c1bd4f25544c88c28a0a8e88 82 Gene3D G3DSA:2.10.260.10 1 69 6.9E-6 T 23-10-2018 DLM_3271 9275f1c1c1bd4f25544c88c28a0a8e88 82 SUPERFAMILY SSF89447 1 59 4.53E-10 T 23-10-2018 IPR037914 SpoVT-AbrB domain superfamily DLM_3271 9275f1c1c1bd4f25544c88c28a0a8e88 82 SMART SM00966 6 49 3.0E-4 T 23-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 PIRSF PIRSF500176 32 358 1.7E-93 T 23-10-2018 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 Gene3D G3DSA:3.40.50.40 237 362 2.7E-26 T 23-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 38 46 - T 23-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 Pfam PF00710 Asparaginase, N-terminal 35 219 1.5E-59 T 23-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 PRINTS PR00139 Asparaginase/glutaminase family signature 287 305 1.8E-12 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 PRINTS PR00139 Asparaginase/glutaminase family signature 36 47 1.8E-12 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 PRINTS PR00139 Asparaginase/glutaminase family signature 109 127 1.8E-12 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 PIRSF PIRSF001220 30 360 8.5E-71 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 110 120 - T 23-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 SMART SM00870 35 350 9.2E-94 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 Gene3D G3DSA:3.40.50.1170 29 231 1.5E-66 T 23-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DLM_0287 af28e9cd6af696cccbb825486040fb21 362 SUPERFAMILY SSF53774 33 360 1.26E-84 T 23-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DLM_4438 2f4bc3743a0ef641daa483ea2555f65e 425 Gene3D G3DSA:1.10.3210.10 17 202 8.3E-21 T 23-10-2018 DLM_4438 2f4bc3743a0ef641daa483ea2555f65e 425 SUPERFAMILY SSF109604 239 405 4.49E-32 T 23-10-2018 DLM_4438 2f4bc3743a0ef641daa483ea2555f65e 425 Pfam PF01966 HD domain 250 370 6.0E-21 T 23-10-2018 IPR006674 HD domain DLM_4438 2f4bc3743a0ef641daa483ea2555f65e 425 SMART SM00471 34 164 56.0 T 23-10-2018 IPR003607 HD/PDEase domain DLM_4438 2f4bc3743a0ef641daa483ea2555f65e 425 SMART SM00471 245 380 2.1E-13 T 23-10-2018 IPR003607 HD/PDEase domain DLM_4438 2f4bc3743a0ef641daa483ea2555f65e 425 Gene3D G3DSA:1.10.3210.10 214 404 9.2E-51 T 23-10-2018 DLM_4438 2f4bc3743a0ef641daa483ea2555f65e 425 SUPERFAMILY SSF109604 24 194 1.26E-14 T 23-10-2018 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 Gene3D G3DSA:3.20.20.100 1 282 4.5E-118 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 PIRSF PIRSF000097 110 271 4.6E-44 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 PIRSF PIRSF000097 1 113 1.8E-35 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 23-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 4.4E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 4.4E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 4.4E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 4.4E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 4.4E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 SUPERFAMILY SSF51430 2 264 7.99E-91 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 23-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DLM_0520 92a7ce1ede709431cee640856ed5bbe3 283 Pfam PF00248 Aldo/keto reductase family 22 257 6.9E-47 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain DLM_3566 ae59bdd93dec929d126fad3791e8a5d3 397 SUPERFAMILY SSF89796 7 393 1.31E-133 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily DLM_3566 ae59bdd93dec929d126fad3791e8a5d3 397 Gene3D G3DSA:3.30.1540.10 229 320 1.8E-124 T 23-10-2018 DLM_3566 ae59bdd93dec929d126fad3791e8a5d3 397 Gene3D G3DSA:3.40.50.10540 8 353 1.8E-124 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily DLM_3566 ae59bdd93dec929d126fad3791e8a5d3 397 Pfam PF02515 CoA-transferase family III 8 370 2.3E-125 T 23-10-2018 IPR003673 CoA-transferase family III GO:0003824 DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 SUPERFAMILY SSF46785 1 87 3.02E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 Gene3D G3DSA:3.40.190.10 92 292 1.2E-69 T 23-10-2018 DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 Gene3D G3DSA:3.40.190.10 161 269 1.2E-69 T 23-10-2018 DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 Gene3D G3DSA:1.10.10.10 1 84 3.0E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 Pfam PF03466 LysR substrate binding domain 87 294 1.7E-42 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0305 ce9530a30b045ff5799ac8f3d704255a 313 SUPERFAMILY SSF53850 88 295 1.36E-37 T 23-10-2018 DLM_0384 5725020515672941aad69d19bb7a143e 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 441 546 1.1E-27 T 23-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DLM_0384 5725020515672941aad69d19bb7a143e 868 Gene3D G3DSA:1.10.390.10 277 440 5.0E-69 T 23-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily DLM_0384 5725020515672941aad69d19bb7a143e 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 6 865 0.0 T 23-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 DLM_0384 5725020515672941aad69d19bb7a143e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 291 306 2.6E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DLM_0384 5725020515672941aad69d19bb7a143e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 310 322 2.6E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DLM_0384 5725020515672941aad69d19bb7a143e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 173 188 2.6E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DLM_0384 5725020515672941aad69d19bb7a143e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 255 265 2.6E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DLM_0384 5725020515672941aad69d19bb7a143e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 123 138 2.6E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DLM_0384 5725020515672941aad69d19bb7a143e 868 SUPERFAMILY SSF55486 202 447 2.2E-78 T 23-10-2018 DLM_0384 5725020515672941aad69d19bb7a143e 868 Gene3D G3DSA:2.60.40.1730 9 191 7.1E-67 T 23-10-2018 DLM_0384 5725020515672941aad69d19bb7a143e 868 Gene3D G3DSA:1.25.50.10 547 867 4.5E-114 T 23-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily DLM_0384 5725020515672941aad69d19bb7a143e 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 549 866 1.6E-114 T 23-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DLM_0384 5725020515672941aad69d19bb7a143e 868 Pfam PF01433 Peptidase family M1 domain 205 433 2.3E-59 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DLM_0384 5725020515672941aad69d19bb7a143e 868 Gene3D G3DSA:2.60.40.1840 441 546 1.7E-32 T 23-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily DLM_0384 5725020515672941aad69d19bb7a143e 868 SUPERFAMILY SSF63737 2 189 2.62E-37 T 23-10-2018 DLM_0384 5725020515672941aad69d19bb7a143e 868 Gene3D G3DSA:1.10.1740.60 193 276 1.3E-38 T 23-10-2018 DLM_0081 6f8be9b0e9974226b66acae86d3cc98c 570 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 9 570 1.6E-261 T 23-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 DLM_0081 6f8be9b0e9974226b66acae86d3cc98c 570 Gene3D G3DSA:3.30.450.90 158 292 1.8E-45 T 23-10-2018 DLM_0081 6f8be9b0e9974226b66acae86d3cc98c 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 23-10-2018 IPR001482 Type II/IV secretion system protein DLM_0081 6f8be9b0e9974226b66acae86d3cc98c 570 Pfam PF00437 Type II/IV secretion system protein 193 459 1.2E-87 T 23-10-2018 IPR001482 Type II/IV secretion system protein DLM_0081 6f8be9b0e9974226b66acae86d3cc98c 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 52 147 1.2E-10 T 23-10-2018 IPR007831 General secretory system II, protein E, N-terminal DLM_0081 6f8be9b0e9974226b66acae86d3cc98c 570 SUPERFAMILY SSF160246 5 143 6.8E-29 T 23-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily DLM_0081 6f8be9b0e9974226b66acae86d3cc98c 570 SUPERFAMILY SSF52540 176 567 1.14E-98 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0081 6f8be9b0e9974226b66acae86d3cc98c 570 Gene3D G3DSA:3.40.50.300 296 569 8.3E-107 T 23-10-2018 DLM_2974 8e8dc927ac8e8cb210c90205e8c80768 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DLM_2974 8e8dc927ac8e8cb210c90205e8c80768 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 375 1.1E-124 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DLM_2974 8e8dc927ac8e8cb210c90205e8c80768 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DLM_2974 8e8dc927ac8e8cb210c90205e8c80768 383 Gene3D G3DSA:3.40.50.1970 2 184 7.4E-56 T 23-10-2018 DLM_2974 8e8dc927ac8e8cb210c90205e8c80768 383 Gene3D G3DSA:1.20.1090.10 186 383 9.8E-76 T 23-10-2018 DLM_2974 8e8dc927ac8e8cb210c90205e8c80768 383 SUPERFAMILY SSF56796 4 382 4.45E-132 T 23-10-2018 DLM_4059 35eb534507752fc9249e22b44e302ae2 318 ProSitePatterns PS01053 Arginase family signature. 239 260 - T 23-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DLM_4059 35eb534507752fc9249e22b44e302ae2 318 Pfam PF00491 Arginase family 37 308 2.6E-90 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_4059 35eb534507752fc9249e22b44e302ae2 318 Gene3D G3DSA:3.40.800.10 4 317 1.7E-121 T 23-10-2018 DLM_4059 35eb534507752fc9249e22b44e302ae2 318 SUPERFAMILY SSF52768 15 310 3.42E-101 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily DLM_4059 35eb534507752fc9249e22b44e302ae2 318 PIRSF PIRSF036979 15 314 5.7E-104 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_4059 35eb534507752fc9249e22b44e302ae2 318 TIGRFAM TIGR01230 agmatinase: agmatinase 36 309 1.8E-62 T 23-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DLM_4059 35eb534507752fc9249e22b44e302ae2 318 PRINTS PR00116 Arginase signature 236 265 4.1E-13 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_4059 35eb534507752fc9249e22b44e302ae2 318 PRINTS PR00116 Arginase signature 123 138 4.1E-13 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_4250 7c101fede3938ce826ea9cd624279fcc 144 Pfam PF05258 Protein of unknown function (DUF721) 17 83 7.0E-12 T 23-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 DLM_1299 3cf2e71c4eee9d765fe45ac556278985 87 SUPERFAMILY SSF46689 1 83 5.2E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1299 3cf2e71c4eee9d765fe45ac556278985 87 Pfam PF01527 Transposase 2 70 1.1E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_3516 3cf2e71c4eee9d765fe45ac556278985 87 SUPERFAMILY SSF46689 1 83 5.2E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3516 3cf2e71c4eee9d765fe45ac556278985 87 Pfam PF01527 Transposase 2 70 1.1E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_1633 3cf2e71c4eee9d765fe45ac556278985 87 SUPERFAMILY SSF46689 1 83 5.2E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1633 3cf2e71c4eee9d765fe45ac556278985 87 Pfam PF01527 Transposase 2 70 1.1E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_1621 3cf2e71c4eee9d765fe45ac556278985 87 SUPERFAMILY SSF46689 1 83 5.2E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1621 3cf2e71c4eee9d765fe45ac556278985 87 Pfam PF01527 Transposase 2 70 1.1E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 SMART SM00955 276 598 4.9E-188 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 Pfam PF08206 Ribonuclease B OB domain 99 159 4.6E-23 T 23-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain DLM_0588 ae025ca53e2397617c516672086f8ff9 871 SMART SM00357 98 160 2.8E-11 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 SUPERFAMILY SSF50249 641 721 1.79E-19 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0588 ae025ca53e2397617c516672086f8ff9 871 ProSitePatterns PS01175 Ribonuclease II family signature. 565 589 - T 23-10-2018 IPR022966 Ribonuclease II/R, conserved site DLM_0588 ae025ca53e2397617c516672086f8ff9 871 Pfam PF00773 RNB domain 276 597 1.6E-107 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 SUPERFAMILY SSF50249 153 252 1.89E-20 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0588 ae025ca53e2397617c516672086f8ff9 871 SMART SM00316 639 722 1.1E-13 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 Pfam PF00575 S1 RNA binding domain 638 719 3.4E-11 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 80 722 5.3E-215 T 23-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 SUPERFAMILY SSF50249 79 162 1.49E-15 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0588 ae025ca53e2397617c516672086f8ff9 871 Hamap MF_01895 Ribonuclease R [rnr]. 51 722 55.873 T 23-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 TIGRFAM TIGR02063 RNase_R: ribonuclease R 32 722 1.4E-264 T 23-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 Gene3D G3DSA:2.40.50.140 642 756 1.0E-20 T 23-10-2018 DLM_0588 ae025ca53e2397617c516672086f8ff9 871 SUPERFAMILY SSF50249 235 638 4.63E-148 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0588 ae025ca53e2397617c516672086f8ff9 871 Gene3D G3DSA:2.40.50.140 87 162 1.3E-17 T 23-10-2018 DLM_3216 1ea58ecc0d86ed59e3d27efcd9528ba6 532 PIRSF PIRSF002741 2 530 1.2E-110 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DLM_3216 1ea58ecc0d86ed59e3d27efcd9528ba6 532 Gene3D G3DSA:3.10.105.10 290 507 5.0E-165 T 23-10-2018 DLM_3216 1ea58ecc0d86ed59e3d27efcd9528ba6 532 SUPERFAMILY SSF53850 25 531 9.88E-145 T 23-10-2018 DLM_3216 1ea58ecc0d86ed59e3d27efcd9528ba6 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 450 2.0E-95 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain DLM_3216 1ea58ecc0d86ed59e3d27efcd9528ba6 532 Gene3D G3DSA:3.90.76.10 46 206 5.0E-165 T 23-10-2018 DLM_3216 1ea58ecc0d86ed59e3d27efcd9528ba6 532 Gene3D G3DSA:3.40.190.10 207 520 5.0E-165 T 23-10-2018 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 393 9.7E-128 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 Gene3D G3DSA:3.40.47.10 8 278 1.1E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 SUPERFAMILY SSF53901 7 272 1.93E-77 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 Pfam PF02803 Thiolase, C-terminal domain 272 393 4.8E-44 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 SUPERFAMILY SSF53901 273 394 5.23E-43 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 Pfam PF00108 Thiolase, N-terminal domain 7 264 4.0E-88 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 PIRSF PIRSF000429 1 395 1.9E-113 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 Gene3D G3DSA:3.40.47.10 129 391 1.1E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2546 1be639c8c6c8108a50cff47e80be6210 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Pfam PF00512 His Kinase A (phospho-acceptor) domain 772 836 2.0E-20 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SMART SM00091 365 432 0.0018 T 23-10-2018 IPR000014 PAS domain DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SMART SM00091 638 705 1.8E-4 T 23-10-2018 IPR000014 PAS domain DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SUPERFAMILY SSF55785 360 471 1.24E-9 T 23-10-2018 IPR035965 PAS domain superfamily DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 943 953 8.9E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 960 978 8.9E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 925 939 8.9E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 984 997 8.9E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SUPERFAMILY SSF55874 826 996 1.96E-44 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SUPERFAMILY SSF47384 758 838 2.16E-22 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SMART SM00073 1181 1274 1.7E-4 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Gene3D G3DSA:3.30.450.20 639 751 1.2E-13 T 23-10-2018 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Pfam PF01627 Hpt domain 1190 1272 5.5E-10 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SUPERFAMILY SSF55785 625 750 2.09E-14 T 23-10-2018 IPR035965 PAS domain superfamily DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SUPERFAMILY SSF52172 1029 1151 2.13E-33 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Gene3D G3DSA:1.10.287.130 752 835 4.1E-29 T 23-10-2018 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SUPERFAMILY SSF47226 1159 1276 2.09E-20 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Gene3D G3DSA:1.20.120.160 1168 1279 9.1E-16 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Gene3D G3DSA:3.40.50.2300 1025 1150 4.8E-36 T 23-10-2018 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SMART SM00387 884 1000 1.0E-35 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SMART SM00388 772 837 4.2E-26 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 SMART SM00448 1028 1145 1.5E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Gene3D G3DSA:3.30.450.20 361 476 3.2E-13 T 23-10-2018 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 885 996 4.2E-29 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Pfam PF00072 Response regulator receiver domain 1030 1145 1.3E-21 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 642 758 2.7E-7 T 23-10-2018 IPR000014 PAS domain DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 365 480 5.1E-8 T 23-10-2018 IPR000014 PAS domain DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Pfam PF00989 PAS fold 366 471 1.1E-7 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Pfam PF13426 PAS domain 654 751 1.7E-6 T 23-10-2018 IPR000014 PAS domain DLM_4051 3b79d61df168b186413b446ebaf6b6b7 1282 Gene3D G3DSA:3.30.565.10 838 1002 6.3E-47 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 SUPERFAMILY SSF46894 238 302 2.11E-19 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 ProSitePatterns PS00622 LuxR-type HTH domain signature. 260 287 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 Pfam PF00196 Bacterial regulatory proteins, luxR family 246 300 3.2E-18 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 SMART SM00421 243 300 1.8E-22 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 SMART SM00448 9 122 2.9E-36 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 Pfam PF00072 Response regulator receiver domain 11 122 6.0E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 Gene3D G3DSA:1.10.10.10 243 305 8.1E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 SUPERFAMILY SSF52172 9 143 2.99E-39 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 276 288 5.1E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 246 260 5.1E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 260 276 5.1E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1380 f00ef5ad81053940b48cdcad59491f10 305 Gene3D G3DSA:3.40.50.12740 8 242 1.9E-45 T 23-10-2018 DLM_0383 7cec67d04076171fd411261e296bba3b 596 Gene3D G3DSA:1.10.390.60 181 455 3.6E-109 T 23-10-2018 DLM_0383 7cec67d04076171fd411261e296bba3b 596 PIRSF PIRSF016493 1 596 2.1E-212 T 23-10-2018 IPR024191 Peptidase M61 DLM_0383 7cec67d04076171fd411261e296bba3b 596 Pfam PF05299 M61 glycyl aminopeptidase 274 389 3.9E-47 T 23-10-2018 IPR007963 Peptidase M61, catalytic domain DLM_0383 7cec67d04076171fd411261e296bba3b 596 SMART SM00228 495 562 3.6E-4 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_0383 7cec67d04076171fd411261e296bba3b 596 Gene3D G3DSA:2.30.42.10 495 594 2.4E-17 T 23-10-2018 DLM_0383 7cec67d04076171fd411261e296bba3b 596 SUPERFAMILY SSF50156 502 573 1.16E-11 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 DLM_0383 7cec67d04076171fd411261e296bba3b 596 SUPERFAMILY SSF55486 187 452 3.74E-14 T 23-10-2018 DLM_0383 7cec67d04076171fd411261e296bba3b 596 Gene3D G3DSA:2.60.40.3650 5 179 1.5E-59 T 23-10-2018 DLM_0383 7cec67d04076171fd411261e296bba3b 596 Pfam PF13180 PDZ domain 496 569 1.3E-7 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_0576 28071a6db86994ce540a4e5917a6961c 371 Gene3D G3DSA:3.30.479.30 88 206 1.5E-17 T 23-10-2018 DLM_0576 28071a6db86994ce540a4e5917a6961c 371 SMART SM00244 38 215 7.4E-22 T 23-10-2018 IPR001107 Band 7 domain DLM_0576 28071a6db86994ce540a4e5917a6961c 371 Pfam PF01145 SPFH domain / Band 7 family 42 224 3.2E-22 T 23-10-2018 IPR001107 Band 7 domain DLM_0576 28071a6db86994ce540a4e5917a6961c 371 SUPERFAMILY SSF117892 102 221 2.22E-19 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily DLM_0576 28071a6db86994ce540a4e5917a6961c 371 TIGRFAM TIGR01933 hflK: HflK protein 40 317 1.5E-89 T 23-10-2018 IPR010201 HflK GO:0016021 DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 Gene3D G3DSA:1.10.1520.10 8 148 1.8E-41 T 23-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 Pfam PF14622 Ribonuclease-III-like 22 142 7.3E-34 T 23-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 SUPERFAMILY SSF69065 5 160 3.31E-44 T 23-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 Gene3D G3DSA:3.30.160.20 156 228 4.6E-20 T 23-10-2018 DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 SMART SM00358 158 226 6.5E-18 T 23-10-2018 IPR014720 Double-stranded RNA-binding domain DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 225 1.2E-68 T 23-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 SUPERFAMILY SSF54768 111 225 5.46E-25 T 23-10-2018 DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 SMART SM00535 23 151 1.2E-49 T 23-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 Pfam PF00035 Double-stranded RNA binding motif 158 225 5.5E-12 T 23-10-2018 IPR014720 Double-stranded RNA-binding domain DLM_1445 a7b0ded018f4d1c822713239ba2e3803 236 Hamap MF_00104 Ribonuclease 3 [rnc]. 11 222 27.997 T 23-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DLM_0453 d7b159341b0cf830188404e6b6e3ad5f 265 Gene3D G3DSA:3.40.50.300 1 241 3.3E-49 T 23-10-2018 DLM_0453 d7b159341b0cf830188404e6b6e3ad5f 265 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0453 d7b159341b0cf830188404e6b6e3ad5f 265 Pfam PF00005 ABC transporter 18 174 1.6E-25 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0453 d7b159341b0cf830188404e6b6e3ad5f 265 SUPERFAMILY SSF52540 3 234 4.97E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0453 d7b159341b0cf830188404e6b6e3ad5f 265 SMART SM00382 27 230 7.3E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 SUPERFAMILY SSF52210 240 385 2.22E-53 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 Gene3D G3DSA:3.30.470.20 1 235 1.1E-89 T 23-10-2018 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 Pfam PF00549 CoA-ligase 263 382 1.3E-25 T 23-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 SUPERFAMILY SSF56059 1 239 7.07E-79 T 23-10-2018 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 Gene3D G3DSA:3.30.1490.20 21 105 1.1E-89 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 42.724 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 Pfam PF08442 ATP-grasp domain 2 203 2.3E-77 T 23-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 PIRSF PIRSF001554 1 388 6.8E-150 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 23-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 Gene3D G3DSA:3.40.50.261 241 388 1.6E-54 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_0359 be35ebbf7795bb080188c3963da89cf6 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 1.2E-159 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 104 4.6E-7 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 Gene3D G3DSA:1.10.287.950 218 549 4.7E-71 T 23-10-2018 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 SMART SM00283 287 548 3.8E-74 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 515 1.7E-45 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 SUPERFAMILY SSF58104 240 549 1.96E-72 T 23-10-2018 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 1.1E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 412 1.1E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 19 1.1E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 SMART SM00304 219 272 4.6E-5 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3691 fee35c4da1789b4d87fad6adc1aa6c12 549 SMART SM00304 307 374 76.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4221 f05d22bb953fc586128bd6ec66b29164 254 SUPERFAMILY SSF53474 24 254 2.75E-19 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4221 f05d22bb953fc586128bd6ec66b29164 254 Pfam PF12146 Serine aminopeptidase, S33 78 170 2.9E-7 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 DLM_4221 f05d22bb953fc586128bd6ec66b29164 254 Gene3D G3DSA:3.40.50.1820 13 254 1.3E-17 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 SUPERFAMILY SSF56935 15 355 8.55E-48 T 23-10-2018 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00184 Neisseria sp. porin signature 325 349 9.0E-28 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00184 Neisseria sp. porin signature 145 162 9.0E-28 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00184 Neisseria sp. porin signature 52 77 9.0E-28 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00184 Neisseria sp. porin signature 285 311 9.0E-28 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00184 Neisseria sp. porin signature 89 108 9.0E-28 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00184 Neisseria sp. porin signature 191 208 9.0E-28 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 50 61 1.3E-12 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 1.3E-12 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 91 101 1.3E-12 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 146 157 1.3E-12 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 Pfam PF13609 Gram-negative porin 8 350 4.2E-33 T 23-10-2018 DLM_2064 2009ca2a655c2b17dde43a088b2a42cf 370 Gene3D G3DSA:2.40.160.10 10 370 2.9E-62 T 23-10-2018 IPR023614 Porin domain superfamily DLM_3771 0d5d8f3442230160acad13352c54e92c 599 Gene3D G3DSA:3.30.390.30 473 594 4.7E-48 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 474 582 1.3E-36 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 161 171 - T 23-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 470 491 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 328 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 127 149 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 557 577 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 442 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 406 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 277 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 535 550 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 175 3.0E-70 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 SUPERFAMILY SSF51230 3 91 3.02E-23 T 23-10-2018 IPR011053 Single hybrid motif DLM_3771 0d5d8f3442230160acad13352c54e92c 599 Gene3D G3DSA:3.50.50.60 280 401 2.6E-126 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3771 0d5d8f3442230160acad13352c54e92c 599 Gene3D G3DSA:2.40.50.100 3 81 2.8E-22 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PIRSF PIRSF000350 45 594 2.5E-84 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 126 587 3.0E-144 T 23-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 Gene3D G3DSA:3.50.50.60 127 461 2.6E-126 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3771 0d5d8f3442230160acad13352c54e92c 599 Pfam PF00364 Biotin-requiring enzyme 6 76 1.9E-20 T 23-10-2018 IPR000089 Biotin/lipoyl attachment DLM_3771 0d5d8f3442230160acad13352c54e92c 599 SUPERFAMILY SSF51905 124 464 1.01E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 147 1.1E-38 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 391 407 1.1E-38 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 321 1.1E-38 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 283 1.1E-38 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 420 442 1.1E-38 T 23-10-2018 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 SUPERFAMILY SSF55424 472 593 4.64E-41 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DLM_3771 0d5d8f3442230160acad13352c54e92c 599 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 127 455 2.0E-57 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_3127 32bb7de29325babe15cdd58b42ae80d0 125 Pfam PF01250 Ribosomal protein S6 3 91 3.0E-29 T 23-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3127 32bb7de29325babe15cdd58b42ae80d0 125 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.959 T 23-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DLM_3127 32bb7de29325babe15cdd58b42ae80d0 125 Gene3D G3DSA:3.30.70.60 1 92 4.1E-33 T 23-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DLM_3127 32bb7de29325babe15cdd58b42ae80d0 125 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.3E-34 T 23-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3127 32bb7de29325babe15cdd58b42ae80d0 125 SUPERFAMILY SSF54995 1 104 1.7E-38 T 23-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0243 8b2962d043a166bd72f496f25024c289 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 251 42.076 T 23-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DLM_0243 8b2962d043a166bd72f496f25024c289 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 244 1.7E-90 T 23-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DLM_0243 8b2962d043a166bd72f496f25024c289 253 Pfam PF02348 Cytidylyltransferase 6 221 4.8E-52 T 23-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DLM_0243 8b2962d043a166bd72f496f25024c289 253 Gene3D G3DSA:3.90.550.10 2 252 9.8E-96 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_0243 8b2962d043a166bd72f496f25024c289 253 SUPERFAMILY SSF53448 5 249 3.67E-61 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_0085 102480464e60529283d0ec58e61ab302 252 SUPERFAMILY SSF160950 2 250 3.53E-85 T 23-10-2018 IPR036268 ZapD domain superfamily DLM_0085 102480464e60529283d0ec58e61ab302 252 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 250 32.876 T 23-10-2018 IPR009777 Cell division protein ZapD DLM_0085 102480464e60529283d0ec58e61ab302 252 Gene3D G3DSA:1.10.3900.10 10 177 4.1E-84 T 23-10-2018 DLM_0085 102480464e60529283d0ec58e61ab302 252 Pfam PF07072 Cell division protein 16 225 8.9E-80 T 23-10-2018 IPR009777 Cell division protein ZapD DLM_0085 102480464e60529283d0ec58e61ab302 252 Gene3D G3DSA:2.60.440.10 4 250 4.1E-84 T 23-10-2018 IPR027462 Z ring-associated protein D, C-terminal DLM_4380 21468075907730efabb89e205cdb8502 231 PIRSF PIRSF002155 1 227 9.7E-78 T 23-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4380 21468075907730efabb89e205cdb8502 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.1E-105 T 23-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DLM_4380 21468075907730efabb89e205cdb8502 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.011 T 23-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DLM_4380 21468075907730efabb89e205cdb8502 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4380 21468075907730efabb89e205cdb8502 231 SUPERFAMILY SSF56808 6 226 7.98E-83 T 23-10-2018 IPR023674 Ribosomal protein L1-like DLM_4380 21468075907730efabb89e205cdb8502 231 Gene3D G3DSA:3.30.190.20 21 225 3.4E-79 T 23-10-2018 DLM_4380 21468075907730efabb89e205cdb8502 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 5.5E-53 T 23-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DLM_4380 21468075907730efabb89e205cdb8502 231 Gene3D G3DSA:3.40.50.790 68 159 3.4E-79 T 23-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DLM_1414 245ac7b912e4d5de87445da28b74a200 213 Pfam PF13460 NAD(P)H-binding 7 198 1.3E-34 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_1414 245ac7b912e4d5de87445da28b74a200 213 Gene3D G3DSA:3.40.50.720 1 213 2.5E-54 T 23-10-2018 DLM_1414 245ac7b912e4d5de87445da28b74a200 213 SUPERFAMILY SSF51735 1 212 1.09E-38 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Pfam PF05188 MutS domain II 119 238 2.1E-19 T 23-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Gene3D G3DSA:3.40.50.300 555 829 4.7E-99 T 23-10-2018 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Pfam PF05190 MutS family domain IV 415 506 9.2E-29 T 23-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 SUPERFAMILY SSF55271 1 106 5.23E-40 T 23-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Pfam PF05192 MutS domain III 259 546 2.1E-37 T 23-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 SMART SM00534 593 780 9.0E-117 T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Gene3D G3DSA:3.40.1170.10 1 112 9.9E-47 T 23-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 SUPERFAMILY SSF52540 554 784 1.06E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 SUPERFAMILY SSF53150 105 256 1.31E-35 T 23-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Gene3D G3DSA:1.10.1420.10 256 547 2.7E-96 T 23-10-2018 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Gene3D G3DSA:1.10.1420.10 387 522 2.7E-96 T 23-10-2018 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 SMART SM00533 273 578 5.0E-96 T 23-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 832 24.567 T 23-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 PIRSF PIRSF037677 1 808 4.9E-147 T 23-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 838 0.0 T 23-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 SUPERFAMILY SSF48334 257 552 3.92E-86 T 23-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Gene3D G3DSA:3.30.420.110 118 250 1.6E-28 T 23-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Pfam PF00488 MutS domain V 597 783 1.2E-85 T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 674 690 - T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DLM_3294 0750a3ad82a9c0fd606a5e58c2babd61 841 Pfam PF01624 MutS domain I 1 110 4.9E-41 T 23-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DLM_0253 167822cc6668b33b00b1cec706565449 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 5 147 1.8E-45 T 23-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 DLM_0253 167822cc6668b33b00b1cec706565449 154 SUPERFAMILY SSF55804 4 149 9.03E-45 T 23-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DLM_0253 167822cc6668b33b00b1cec706565449 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 147 1.1E-37 T 23-10-2018 IPR002178 PTS EIIA type-2 domain DLM_0253 167822cc6668b33b00b1cec706565449 154 Gene3D G3DSA:3.40.930.10 1 151 1.3E-53 T 23-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DLM_0253 167822cc6668b33b00b1cec706565449 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 23-10-2018 IPR002178 PTS EIIA type-2 domain DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 9.3E-17 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 Pfam PF04552 Sigma-54, DNA binding domain 317 471 2.7E-66 T 23-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 Gene3D G3DSA:1.10.10.1330 115 244 1.5E-18 T 23-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 Pfam PF04963 Sigma-54 factor, core binding domain 116 302 1.4E-53 T 23-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 471 1.8E-137 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 PRINTS PR00045 Sigma-54 factor signature 185 202 1.8E-29 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 PRINTS PR00045 Sigma-54 factor signature 389 400 1.8E-29 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 PRINTS PR00045 Sigma-54 factor signature 447 465 1.8E-29 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 PRINTS PR00045 Sigma-54 factor signature 373 385 1.8E-29 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 PIRSF PIRSF000774 1 473 1.8E-152 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 Gene3D G3DSA:1.10.10.60 414 471 1.7E-22 T 23-10-2018 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 361 380 - T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0255 93750a7b5fc8c3a2006c240c59b8a71c 473 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 452 459 - T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DLM_0908 3aff7b5d090658ab25e42c7576512a28 307 Pfam PF05954 Phage late control gene D protein (GPD) 44 257 2.0E-49 T 23-10-2018 DLM_0908 3aff7b5d090658ab25e42c7576512a28 307 Gene3D G3DSA:2.30.110.50 33 248 7.6E-51 T 23-10-2018 DLM_0908 3aff7b5d090658ab25e42c7576512a28 307 SUPERFAMILY SSF69279 23 208 2.78E-43 T 23-10-2018 DLM_0908 3aff7b5d090658ab25e42c7576512a28 307 Gene3D G3DSA:3.55.50.10 112 213 7.6E-51 T 23-10-2018 DLM_2977 21ddc3d32d4c8c58c7a6c045c203fb54 181 Pfam PF14341 PilX N-terminal 15 64 4.1E-7 T 23-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain DLM_2977 21ddc3d32d4c8c58c7a6c045c203fb54 181 Pfam PF13681 Type IV pilus assembly protein PilX C-term 88 179 2.8E-15 T 23-10-2018 IPR025205 PilX/PilW C-terminal domain DLM_0337 c4f9f89b14440ab5d0ba98a14f0aae2b 374 SUPERFAMILY SSF53335 16 81 5.95E-16 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0337 c4f9f89b14440ab5d0ba98a14f0aae2b 374 Gene3D G3DSA:3.40.50.150 3 102 9.5E-14 T 23-10-2018 DLM_0337 c4f9f89b14440ab5d0ba98a14f0aae2b 374 SUPERFAMILY SSF53335 32 260 3.33E-7 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0337 c4f9f89b14440ab5d0ba98a14f0aae2b 374 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 242 247 - T 23-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 DLM_0337 c4f9f89b14440ab5d0ba98a14f0aae2b 374 Pfam PF01555 DNA methylase 17 75 7.2E-8 T 23-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 DLM_3315 2404c91f85a70bf90b96a6a96560dcf8 333 Pfam PF01476 LysM domain 59 100 1.6E-9 T 23-10-2018 IPR018392 LysM domain DLM_3315 2404c91f85a70bf90b96a6a96560dcf8 333 Gene3D G3DSA:2.70.70.10 172 332 3.1E-37 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3315 2404c91f85a70bf90b96a6a96560dcf8 333 SUPERFAMILY SSF51261 200 329 1.05E-46 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3315 2404c91f85a70bf90b96a6a96560dcf8 333 Pfam PF01551 Peptidase family M23 231 325 4.1E-30 T 23-10-2018 IPR016047 Peptidase M23 DLM_3315 2404c91f85a70bf90b96a6a96560dcf8 333 Gene3D G3DSA:3.10.350.10 44 117 5.4E-12 T 23-10-2018 IPR036779 LysM domain superfamily DLM_3315 2404c91f85a70bf90b96a6a96560dcf8 333 SUPERFAMILY SSF54106 57 101 7.59E-9 T 23-10-2018 DLM_3315 2404c91f85a70bf90b96a6a96560dcf8 333 SMART SM00257 58 101 2.2E-9 T 23-10-2018 IPR018392 LysM domain DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Pfam PF08447 PAS fold 478 561 1.2E-14 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SMART SM00387 701 795 6.6E-11 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Gene3D G3DSA:3.30.565.10 663 798 1.1E-30 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 704 794 4.0E-10 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Gene3D G3DSA:3.30.450.20 439 566 4.4E-20 T 23-10-2018 DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SMART SM00086 397 437 2.1 T 23-10-2018 IPR001610 PAC motif DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SMART SM00086 528 569 3.5 T 23-10-2018 IPR001610 PAC motif DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 261 5.5E-19 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SMART SM00091 449 522 0.2 T 23-10-2018 IPR000014 PAS domain DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SMART SM00091 325 391 2.6E-4 T 23-10-2018 IPR000014 PAS domain DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Gene3D G3DSA:3.30.450.20 315 433 1.0E-21 T 23-10-2018 DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Gene3D G3DSA:3.40.190.10 35 260 3.0E-38 T 23-10-2018 DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SUPERFAMILY SSF55785 337 446 8.38E-20 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Gene3D G3DSA:3.40.190.10 127 223 3.0E-38 T 23-10-2018 DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Pfam PF07730 Histidine kinase 597 664 4.2E-14 T 23-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 330 444 5.6E-14 T 23-10-2018 IPR000014 PAS domain DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 445 574 5.2E-6 T 23-10-2018 IPR000014 PAS domain DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SMART SM00062 42 264 3.9E-8 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SUPERFAMILY SSF55874 672 792 7.66E-20 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 Pfam PF13426 PAS domain 337 436 6.7E-11 T 23-10-2018 IPR000014 PAS domain DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SUPERFAMILY SSF53850 44 264 3.71E-25 T 23-10-2018 DLM_1862 6b8317fa72cd43f3ea024fad35ca31ac 800 SUPERFAMILY SSF55785 434 567 3.67E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3455 c19523da103599ecb9f39eab36e0df6d 336 Gene3D G3DSA:3.40.718.10 1 336 2.4E-124 T 23-10-2018 DLM_3455 c19523da103599ecb9f39eab36e0df6d 336 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 325 5.2E-90 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_3455 c19523da103599ecb9f39eab36e0df6d 336 SUPERFAMILY SSF53659 2 331 1.04E-104 T 23-10-2018 DLM_3455 c19523da103599ecb9f39eab36e0df6d 336 SMART SM01329 2 327 3.8E-148 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_3455 c19523da103599ecb9f39eab36e0df6d 336 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 222 241 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DLM_2866 f7764ba31da36d9cb38efeeb7e55a592 284 Gene3D G3DSA:3.40.50.720 2 165 2.6E-38 T 23-10-2018 DLM_2866 f7764ba31da36d9cb38efeeb7e55a592 284 Gene3D G3DSA:1.10.1040.20 168 267 4.1E-23 T 23-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily DLM_2866 f7764ba31da36d9cb38efeeb7e55a592 284 SUPERFAMILY SSF51735 3 165 1.07E-25 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2866 f7764ba31da36d9cb38efeeb7e55a592 284 Pfam PF10728 Domain of unknown function (DUF2520) 137 262 6.9E-37 T 23-10-2018 IPR018931 Domain of unknown function DUF2520 DLM_2866 f7764ba31da36d9cb38efeeb7e55a592 284 Pfam PF10727 Rossmann-like domain 5 119 2.8E-15 T 23-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain DLM_2866 f7764ba31da36d9cb38efeeb7e55a592 284 SUPERFAMILY SSF48179 169 268 1.87E-23 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_3340 14a159548d86c24218aeb949926061ca 971 Gene3D G3DSA:3.30.2130.30 581 827 3.9E-128 T 23-10-2018 DLM_3340 14a159548d86c24218aeb949926061ca 971 SMART SM00981 632 730 4.1E-17 T 23-10-2018 IPR004114 THUMP domain GO:0003723 DLM_3340 14a159548d86c24218aeb949926061ca 971 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 875 881 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DLM_3340 14a159548d86c24218aeb949926061ca 971 Pfam PF02926 THUMP domain 600 730 1.0E-13 T 23-10-2018 IPR004114 THUMP domain GO:0003723 DLM_3340 14a159548d86c24218aeb949926061ca 971 Gene3D G3DSA:3.40.50.150 745 941 3.9E-128 T 23-10-2018 DLM_3340 14a159548d86c24218aeb949926061ca 971 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 769 783 6.2E-5 T 23-10-2018 DLM_3340 14a159548d86c24218aeb949926061ca 971 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 872 884 6.2E-5 T 23-10-2018 DLM_3340 14a159548d86c24218aeb949926061ca 971 SUPERFAMILY SSF53335 720 945 2.2E-40 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3340 14a159548d86c24218aeb949926061ca 971 Pfam PF01170 Putative RNA methylase family UPF0020 738 943 8.6E-50 T 23-10-2018 IPR000241 Putative RNA methylase domain DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 36 471 1.2E-154 T 23-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 PRINTS PR00834 HtrA/DegQ protease family signature 206 223 8.0E-50 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 8.0E-50 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 PRINTS PR00834 HtrA/DegQ protease family signature 172 196 8.0E-50 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 PRINTS PR00834 HtrA/DegQ protease family signature 314 326 8.0E-50 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 PRINTS PR00834 HtrA/DegQ protease family signature 111 123 8.0E-50 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 PRINTS PR00834 HtrA/DegQ protease family signature 132 152 8.0E-50 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 SUPERFAMILY SSF50494 34 265 5.55E-66 T 23-10-2018 IPR009003 Peptidase S1, PA clan DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 Gene3D G3DSA:2.30.42.10 394 475 2.1E-14 T 23-10-2018 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 SUPERFAMILY SSF50156 232 357 9.86E-26 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 Gene3D G3DSA:2.30.42.10 269 372 1.1E-28 T 23-10-2018 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 SUPERFAMILY SSF50156 391 475 7.36E-12 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 Pfam PF13180 PDZ domain 275 365 6.8E-19 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 Gene3D G3DSA:2.40.10.120 35 267 1.1E-81 T 23-10-2018 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 Pfam PF13365 Trypsin-like peptidase domain 102 235 1.9E-34 T 23-10-2018 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 SMART SM00228 274 356 8.9E-13 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_0658 ca12d5d36418f1e31b8b96ed23ca4cd7 476 SMART SM00228 390 466 0.0041 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_3635 33fc6a9f0c3e26e5860c5c23669a6639 209 SUPERFAMILY SSF53850 2 196 3.91E-27 T 23-10-2018 DLM_3635 33fc6a9f0c3e26e5860c5c23669a6639 209 Gene3D G3DSA:3.40.190.10 2 194 2.3E-20 T 23-10-2018 DLM_3635 33fc6a9f0c3e26e5860c5c23669a6639 209 Gene3D G3DSA:3.40.190.10 58 157 2.3E-20 T 23-10-2018 DLM_3635 33fc6a9f0c3e26e5860c5c23669a6639 209 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 2 194 2.0E-16 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_4246 3e7028e2ed09d3717b6d6807911dca8b 330 SUPERFAMILY SSF53850 20 327 8.62E-84 T 23-10-2018 DLM_4246 3e7028e2ed09d3717b6d6807911dca8b 330 Pfam PF13531 Bacterial extracellular solute-binding protein 32 280 3.5E-43 T 23-10-2018 DLM_4246 3e7028e2ed09d3717b6d6807911dca8b 330 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 14 326 1.7E-131 T 23-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 DLM_4246 3e7028e2ed09d3717b6d6807911dca8b 330 Gene3D G3DSA:3.40.190.10 27 295 3.5E-125 T 23-10-2018 DLM_4246 3e7028e2ed09d3717b6d6807911dca8b 330 Gene3D G3DSA:3.40.190.10 114 325 3.5E-125 T 23-10-2018 DLM_3754 da975da777b96ec9b94924facd3aecae 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 81 4.9E-15 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3754 da975da777b96ec9b94924facd3aecae 244 SUPERFAMILY SSF64288 69 244 1.73E-43 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_3754 da975da777b96ec9b94924facd3aecae 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 6.1E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3754 da975da777b96ec9b94924facd3aecae 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 6.1E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3754 da975da777b96ec9b94924facd3aecae 244 Gene3D G3DSA:3.40.1410.10 83 244 2.1E-39 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_3754 da975da777b96ec9b94924facd3aecae 244 Gene3D G3DSA:1.10.10.10 11 82 4.0E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3754 da975da777b96ec9b94924facd3aecae 244 SUPERFAMILY SSF46785 14 84 7.76E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3754 da975da777b96ec9b94924facd3aecae 244 SMART SM00345 22 81 2.5E-16 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3754 da975da777b96ec9b94924facd3aecae 244 SMART SM00866 101 237 2.5E-31 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_3754 da975da777b96ec9b94924facd3aecae 244 Pfam PF07702 UTRA domain 102 237 1.1E-32 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_3896 62bed86bc5bc3a4b9e51ff87733da3b7 478 SUPERFAMILY SSF53383 111 467 2.89E-80 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3896 62bed86bc5bc3a4b9e51ff87733da3b7 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 3.2E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3896 62bed86bc5bc3a4b9e51ff87733da3b7 478 Gene3D G3DSA:1.10.10.10 1 69 5.0E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3896 62bed86bc5bc3a4b9e51ff87733da3b7 478 Pfam PF00155 Aminotransferase class I and II 142 451 2.1E-31 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_3896 62bed86bc5bc3a4b9e51ff87733da3b7 478 Gene3D G3DSA:3.90.1150.10 101 466 9.5E-89 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3896 62bed86bc5bc3a4b9e51ff87733da3b7 478 Gene3D G3DSA:3.40.640.10 145 364 9.5E-89 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3896 62bed86bc5bc3a4b9e51ff87733da3b7 478 SMART SM00345 10 69 6.5E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3896 62bed86bc5bc3a4b9e51ff87733da3b7 478 SUPERFAMILY SSF46785 3 73 3.54E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4298 ffabc066f771d6d918ffd9603ad725db 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_4298 ffabc066f771d6d918ffd9603ad725db 315 SUPERFAMILY SSF53613 1 298 3.43E-55 T 23-10-2018 IPR029056 Ribokinase-like DLM_4298 ffabc066f771d6d918ffd9603ad725db 315 Pfam PF00294 pfkB family carbohydrate kinase 34 292 1.8E-36 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB DLM_4298 ffabc066f771d6d918ffd9603ad725db 315 Gene3D G3DSA:3.40.1190.20 1 314 2.5E-91 T 23-10-2018 IPR029056 Ribokinase-like DLM_1652 be26e63a829b224525462ce035fa2dc6 115 Pfam PF00085 Thioredoxin 17 105 1.1E-14 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 DLM_1652 be26e63a829b224525462ce035fa2dc6 115 SUPERFAMILY SSF52833 25 107 5.25E-19 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_1652 be26e63a829b224525462ce035fa2dc6 115 Gene3D G3DSA:3.40.30.10 8 111 7.4E-20 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 SUPERFAMILY SSF56784 510 804 2.43E-48 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1757 7667ac642a894512a924cd468aa4b571 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 510 718 2.0E-33 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 Gene3D G3DSA:2.70.150.20 303 417 2.0E-29 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 SUPERFAMILY SSF81665 255 505 4.58E-9 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 363 377 7.6E-22 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 723 7.6E-22 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 511 525 7.6E-22 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 727 739 7.6E-22 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 661 7.6E-22 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 SUPERFAMILY SSF81653 323 412 5.36E-21 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 87 2.5E-26 T 23-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase DLM_1757 7667ac642a894512a924cd468aa4b571 811 ProSitePatterns PS01229 Hypothetical cof family signature 2. 704 726 - T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 230 806 1.2E-149 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 Pfam PF00122 E1-E2 ATPase 325 489 1.2E-43 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 617 784 3.8E-37 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 284 550 4.8E-36 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 Gene3D G3DSA:3.40.50.1000 492 755 1.0E-71 T 23-10-2018 IPR023214 HAD superfamily DLM_1757 7667ac642a894512a924cd468aa4b571 811 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 676 692 2.4E-6 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 735 760 2.4E-6 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 704 720 2.4E-6 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 SUPERFAMILY SSF55008 87 164 8.64E-19 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DLM_1757 7667ac642a894512a924cd468aa4b571 811 Gene3D G3DSA:3.30.70.100 92 169 9.9E-14 T 23-10-2018 DLM_1757 7667ac642a894512a924cd468aa4b571 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 247 806 2.7E-160 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 Pfam PF00403 Heavy-metal-associated domain 98 155 1.2E-7 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DLM_1757 7667ac642a894512a924cd468aa4b571 811 Gene3D G3DSA:3.40.1110.10 522 636 1.0E-71 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DLM_1757 7667ac642a894512a924cd468aa4b571 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 513 519 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DLM_1968 6472f172e4fff118527e39896fdac964 766 Gene3D G3DSA:3.10.20.310 349 425 5.0E-24 T 23-10-2018 DLM_1968 6472f172e4fff118527e39896fdac964 766 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 766 25.53 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DLM_1968 6472f172e4fff118527e39896fdac964 766 Gene3D G3DSA:3.10.20.310 176 267 2.4E-23 T 23-10-2018 DLM_1968 6472f172e4fff118527e39896fdac964 766 Pfam PF07244 Surface antigen variable number repeat 177 264 1.0E-15 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DLM_1968 6472f172e4fff118527e39896fdac964 766 Pfam PF07244 Surface antigen variable number repeat 93 173 4.2E-12 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DLM_1968 6472f172e4fff118527e39896fdac964 766 Pfam PF07244 Surface antigen variable number repeat 349 422 1.8E-12 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DLM_1968 6472f172e4fff118527e39896fdac964 766 Pfam PF07244 Surface antigen variable number repeat 26 87 2.0E-7 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DLM_1968 6472f172e4fff118527e39896fdac964 766 Pfam PF07244 Surface antigen variable number repeat 268 345 5.8E-15 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DLM_1968 6472f172e4fff118527e39896fdac964 766 PIRSF PIRSF006076 1 766 2.6E-253 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DLM_1968 6472f172e4fff118527e39896fdac964 766 Pfam PF01103 Surface antigen 449 766 2.7E-78 T 23-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DLM_1968 6472f172e4fff118527e39896fdac964 766 Gene3D G3DSA:2.40.160.50 426 766 6.2E-117 T 23-10-2018 DLM_1968 6472f172e4fff118527e39896fdac964 766 Gene3D G3DSA:3.10.20.310 19 92 5.1E-22 T 23-10-2018 DLM_1968 6472f172e4fff118527e39896fdac964 766 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 25 766 1.5E-274 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DLM_1968 6472f172e4fff118527e39896fdac964 766 Gene3D G3DSA:3.10.20.310 93 174 9.5E-19 T 23-10-2018 DLM_1968 6472f172e4fff118527e39896fdac964 766 Gene3D G3DSA:3.10.20.310 269 344 2.9E-21 T 23-10-2018 DLM_0715 42da13cd6bc328e400d992808b7e28f9 105 Gene3D G3DSA:2.40.10.220 5 100 1.0E-5 T 23-10-2018 DLM_0715 42da13cd6bc328e400d992808b7e28f9 105 Pfam PF07238 PilZ domain 9 99 1.0E-9 T 23-10-2018 IPR009875 PilZ domain GO:0035438 DLM_0715 42da13cd6bc328e400d992808b7e28f9 105 SUPERFAMILY SSF141371 6 92 1.75E-7 T 23-10-2018 DLM_1627 b905a2423954876deee22fc7f150e2d3 488 SMART SM00974 74 156 0.3 T 23-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding DLM_1627 b905a2423954876deee22fc7f150e2d3 488 SMART SM00974 220 307 7.3E-11 T 23-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding DLM_1627 b905a2423954876deee22fc7f150e2d3 488 Pfam PF10544 T5orf172 domain 208 304 3.2E-12 T 23-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding DLM_1627 b905a2423954876deee22fc7f150e2d3 488 Pfam PF10544 T5orf172 domain 62 155 1.2E-8 T 23-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding DLM_3330 db199d804016c207bb67fbf52a10117f 626 Gene3D G3DSA:1.10.287.950 295 626 3.0E-70 T 23-10-2018 DLM_3330 db199d804016c207bb67fbf52a10117f 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 591 3.6E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3330 db199d804016c207bb67fbf52a10117f 626 SUPERFAMILY SSF58104 317 626 2.62E-70 T 23-10-2018 DLM_3330 db199d804016c207bb67fbf52a10117f 626 SMART SM00283 364 625 6.7E-63 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3330 db199d804016c207bb67fbf52a10117f 626 SMART SM00304 295 349 5.0E-8 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3330 db199d804016c207bb67fbf52a10117f 626 SMART SM00304 356 409 110.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3330 db199d804016c207bb67fbf52a10117f 626 Pfam PF00672 HAMP domain 296 346 1.6E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3330 db199d804016c207bb67fbf52a10117f 626 Gene3D G3DSA:3.30.450.20 62 168 7.3E-51 T 23-10-2018 DLM_3330 db199d804016c207bb67fbf52a10117f 626 Gene3D G3DSA:3.30.450.20 52 268 7.3E-51 T 23-10-2018 DLM_3330 db199d804016c207bb67fbf52a10117f 626 SUPERFAMILY SSF103190 113 179 9.42E-13 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_3330 db199d804016c207bb67fbf52a10117f 626 Pfam PF02743 Cache domain 43 255 5.4E-24 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 SUPERFAMILY SSF53901 274 393 1.23E-40 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 Gene3D G3DSA:3.40.47.10 128 390 5.7E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 SUPERFAMILY SSF53901 6 271 8.77E-75 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 Pfam PF00108 Thiolase, N-terminal domain 7 263 1.1E-81 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 392 2.9E-131 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 PIRSF PIRSF000429 1 394 1.5E-115 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 4.1E-41 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DLM_1214 4511d1939f35e325c44daa95dc5a9cd1 394 Gene3D G3DSA:3.40.47.10 11 277 5.7E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3030 8531e7118c58f75f0f0e61c79df62825 298 Gene3D G3DSA:1.10.10.10 2 88 2.9E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3030 8531e7118c58f75f0f0e61c79df62825 298 SUPERFAMILY SSF53850 90 293 2.35E-52 T 23-10-2018 DLM_3030 8531e7118c58f75f0f0e61c79df62825 298 Pfam PF03466 LysR substrate binding domain 88 289 5.6E-50 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3030 8531e7118c58f75f0f0e61c79df62825 298 SUPERFAMILY SSF46785 3 111 1.11E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3030 8531e7118c58f75f0f0e61c79df62825 298 Gene3D G3DSA:3.40.190.290 91 291 1.3E-69 T 23-10-2018 DLM_3030 8531e7118c58f75f0f0e61c79df62825 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.8E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 Gene3D G3DSA:2.40.500.20 83 193 4.6E-45 T 23-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 SUPERFAMILY SSF54719 82 192 5.11E-46 T 23-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 81 3.5E-34 T 23-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 PIRSF PIRSF000349 1 193 1.4E-87 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 8.4E-41 T 23-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 23-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.3E-23 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 4.3E-23 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.3E-23 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.3E-23 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.3E-23 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 SUPERFAMILY SSF46609 1 84 1.18E-34 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_1098 e77afc328831b1c10571e75eb6f7b4e2 193 Gene3D G3DSA:1.10.287.990 20 81 2.3E-25 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 Pfam PF13596 PAS domain 712 816 6.1E-28 T 23-10-2018 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 SUPERFAMILY SSF55785 697 817 2.09E-8 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 Pfam PF01339 CheB methylesterase 16 188 2.4E-49 T 23-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 Pfam PF01739 CheR methyltransferase, SAM binding domain 273 458 1.0E-45 T 23-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 SUPERFAMILY SSF53335 272 468 3.14E-46 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 Pfam PF03705 CheR methyltransferase, all-alpha domain 209 254 8.4E-14 T 23-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 SUPERFAMILY SSF52738 13 195 1.96E-52 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 SMART SM00138 206 469 1.5E-70 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 Gene3D G3DSA:3.30.450.20 694 831 3.5E-13 T 23-10-2018 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 PRINTS PR00996 Glutamate methyltransferase family signature 343 359 6.4E-25 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 PRINTS PR00996 Glutamate methyltransferase family signature 265 277 6.4E-25 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 PRINTS PR00996 Glutamate methyltransferase family signature 409 423 6.4E-25 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 PRINTS PR00996 Glutamate methyltransferase family signature 228 241 6.4E-25 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 PRINTS PR00996 Glutamate methyltransferase family signature 305 325 6.4E-25 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 PRINTS PR00996 Glutamate methyltransferase family signature 428 451 6.4E-25 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 Gene3D G3DSA:3.40.50.180 6 198 5.6E-57 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 SUPERFAMILY SSF47757 206 274 3.01E-12 T 23-10-2018 DLM_2181 1d4986f81d27fcad22fe1f324467882b 831 Gene3D G3DSA:3.40.50.150 271 471 9.6E-58 T 23-10-2018 DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 PRINTS PR00050 Cold shock protein signature 4 19 1.5E-13 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 PRINTS PR00050 Cold shock protein signature 25 34 1.5E-13 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 PRINTS PR00050 Cold shock protein signature 40 58 1.5E-13 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 SMART SM00357 3 67 2.5E-24 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-10-2018 IPR019844 Cold-shock conserved site DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 SUPERFAMILY SSF50249 1 66 3.43E-23 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.9E-27 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 Gene3D G3DSA:2.40.50.140 2 65 2.0E-26 T 23-10-2018 DLM_1741 4f3b0df02564564eca4584c8ea77dac7 67 PIRSF PIRSF002599 1 67 4.3E-21 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 287 4.8E-112 T 23-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 Gene3D G3DSA:3.20.20.70 2 291 1.3E-110 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 65.813 T 23-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 PIRSF PIRSF001365 1 291 7.3E-95 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.2E-34 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.2E-34 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.2E-34 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.2E-34 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 SMART SM01130 1 289 5.0E-141 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 2.6E-105 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 23-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 SUPERFAMILY SSF51569 2 288 7.12E-103 T 23-10-2018 DLM_3069 1e463ec3a3ea36f3462cf94971a36062 291 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 23-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_1452 904dca5db36037cafb9bb788f34ec774 386 SUPERFAMILY SSF109604 135 302 6.2E-9 T 23-10-2018 DLM_1452 904dca5db36037cafb9bb788f34ec774 386 Pfam PF13487 HD domain 194 256 9.2E-6 T 23-10-2018 DLM_1452 904dca5db36037cafb9bb788f34ec774 386 Gene3D G3DSA:1.10.3210.10 131 306 1.1E-24 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 Gene3D G3DSA:2.40.50.230 408 515 2.4E-43 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 Gene3D G3DSA:3.55.50.10 112 213 4.3E-81 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 538 645 1.8E-37 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 557 4.7E-122 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 SUPERFAMILY SSF69349 699 851 5.49E-7 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 697 851 4.0E-54 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 Gene3D G3DSA:3.30.1920.30 246 315 4.3E-81 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 Gene3D G3DSA:2.30.110.50 33 363 4.3E-81 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 SUPERFAMILY SSF69279 223 397 2.55E-14 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 565 3.1E-98 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 SUPERFAMILY SSF69255 415 510 2.59E-31 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 SUPERFAMILY SSF69279 23 209 2.89E-45 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 1.5E-80 T 23-10-2018 DLM_0033 baa2058255829454cc96d28fd6a9f6da 923 SUPERFAMILY SSF69349 500 558 7.53E-7 T 23-10-2018 DLM_3485 cb44ef852203e587b295b8fb764c9687 939 SUPERFAMILY SSF52540 7 900 7.66E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3485 cb44ef852203e587b295b8fb764c9687 939 Gene3D G3DSA:3.40.50.300 4 254 1.3E-15 T 23-10-2018 DLM_3485 cb44ef852203e587b295b8fb764c9687 939 Pfam PF13555 P-loop containing region of AAA domain 5 49 6.9E-10 T 23-10-2018 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 Gene3D G3DSA:3.30.1490.20 113 178 1.8E-76 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 243 271 - T 23-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 PIRSF PIRSF039102 2 47 4.6E-8 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 PIRSF PIRSF039102 42 301 1.5E-85 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 65 76 - T 23-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 SUPERFAMILY SSF52440 6 98 2.88E-31 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 301 35.701 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 299 2.0E-102 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 SUPERFAMILY SSF56059 98 297 7.24E-56 T 23-10-2018 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 Gene3D G3DSA:3.30.470.20 87 294 1.8E-76 T 23-10-2018 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 Pfam PF01820 D-ala D-ala ligase N-terminus 6 88 3.0E-18 T 23-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 Pfam PF07478 D-ala D-ala ligase C-terminus 105 296 7.7E-58 T 23-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4198 1349fae57e21cefd448ce78ec169dedc 303 Gene3D G3DSA:3.40.50.20 1 86 2.3E-32 T 23-10-2018 DLM_2241 cb8d84b495cd1507a4570846739bd5c3 296 SUPERFAMILY SSF111369 49 208 3.92E-24 T 23-10-2018 DLM_2241 cb8d84b495cd1507a4570846739bd5c3 296 Gene3D G3DSA:2.40.30.170 171 291 2.2E-26 T 23-10-2018 DLM_2241 cb8d84b495cd1507a4570846739bd5c3 296 Pfam PF13437 HlyD family secretion protein 159 240 2.5E-12 T 23-10-2018 DLM_2241 cb8d84b495cd1507a4570846739bd5c3 296 Pfam PF13533 Biotin-lipoyl like 50 98 2.2E-19 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DLM_2241 cb8d84b495cd1507a4570846739bd5c3 296 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 241 1.5E-35 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_2241 cb8d84b495cd1507a4570846739bd5c3 296 Gene3D G3DSA:2.40.50.100 49 121 5.5E-13 T 23-10-2018 DLM_1543 401c0e8334a881e613ce966e16caf7b3 320 SUPERFAMILY SSF53850 35 261 3.81E-54 T 23-10-2018 DLM_1543 401c0e8334a881e613ce966e16caf7b3 320 Gene3D G3DSA:3.40.190.10 37 309 5.8E-112 T 23-10-2018 DLM_1543 401c0e8334a881e613ce966e16caf7b3 320 SMART SM00062 36 252 5.0E-26 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1543 401c0e8334a881e613ce966e16caf7b3 320 Pfam PF09084 NMT1/THI5 like 64 240 8.0E-17 T 23-10-2018 IPR015168 SsuA/THI5-like DLM_1543 401c0e8334a881e613ce966e16caf7b3 320 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 38 317 5.1E-75 T 23-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DLM_1543 401c0e8334a881e613ce966e16caf7b3 320 Gene3D G3DSA:3.40.190.10 116 215 5.8E-112 T 23-10-2018 DLM_1543 401c0e8334a881e613ce966e16caf7b3 320 Gene3D G3DSA:1.10.8.450 247 279 5.8E-112 T 23-10-2018 DLM_3791 50e2b6d36b5a62f829f747ac3076be09 130 Gene3D G3DSA:1.10.10.690 1 129 8.6E-42 T 23-10-2018 IPR027405 YidB-like DLM_3791 50e2b6d36b5a62f829f747ac3076be09 130 Pfam PF06078 Bacterial protein of unknown function (DUF937) 7 106 1.0E-13 T 23-10-2018 IPR009282 Protein of unknown function DUF937 DLM_3791 50e2b6d36b5a62f829f747ac3076be09 130 SUPERFAMILY SSF140804 4 127 6.41E-35 T 23-10-2018 IPR027405 YidB-like DLM_2805 504ad4c2d50e5e57dbac7a6dfedbc5b5 248 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 236 3.4E-61 T 23-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_2805 504ad4c2d50e5e57dbac7a6dfedbc5b5 248 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 230 6.9E-50 T 23-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_2805 504ad4c2d50e5e57dbac7a6dfedbc5b5 248 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 241 39.267 T 23-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_2805 504ad4c2d50e5e57dbac7a6dfedbc5b5 248 Gene3D G3DSA:3.20.20.70 10 242 1.6E-81 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2805 504ad4c2d50e5e57dbac7a6dfedbc5b5 248 SMART SM00934 16 236 3.8E-96 T 23-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_2805 504ad4c2d50e5e57dbac7a6dfedbc5b5 248 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 23-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_2805 504ad4c2d50e5e57dbac7a6dfedbc5b5 248 SUPERFAMILY SSF51366 15 237 9.72E-75 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DLM_3632 dd1108da2444f8540077a5e88289c570 342 SUPERFAMILY SSF51430 1 313 3.4E-97 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_3632 dd1108da2444f8540077a5e88289c570 342 Gene3D G3DSA:3.20.20.100 1 322 5.6E-111 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_3632 dd1108da2444f8540077a5e88289c570 342 PRINTS PR00069 Aldo-keto reductase signature 45 69 3.2E-6 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_3632 dd1108da2444f8540077a5e88289c570 342 PRINTS PR00069 Aldo-keto reductase signature 142 159 3.2E-6 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_3632 dd1108da2444f8540077a5e88289c570 342 PRINTS PR00069 Aldo-keto reductase signature 111 129 3.2E-6 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_3632 dd1108da2444f8540077a5e88289c570 342 Pfam PF00248 Aldo/keto reductase family 15 309 3.0E-70 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain DLM_4184 00352f8d415006fc064acff98b5f42e4 483 Pfam PF01425 Amidase 22 464 1.2E-155 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_4184 00352f8d415006fc064acff98b5f42e4 483 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 10 474 1.3E-182 T 23-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_4184 00352f8d415006fc064acff98b5f42e4 483 SUPERFAMILY SSF75304 2 481 1.7E-164 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_4184 00352f8d415006fc064acff98b5f42e4 483 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 475 93.561 T 23-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_4184 00352f8d415006fc064acff98b5f42e4 483 Gene3D G3DSA:3.90.1300.10 1 483 1.7E-200 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_4184 00352f8d415006fc064acff98b5f42e4 483 ProSitePatterns PS00571 Amidases signature. 149 180 - T 23-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DLM_1281 3185d14d17ae969696735173f9164bcf 90 Gene3D G3DSA:4.10.520.10 1 90 3.1E-30 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_1281 3185d14d17ae969696735173f9164bcf 90 SMART SM00411 1 90 3.3E-31 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1281 3185d14d17ae969696735173f9164bcf 90 SUPERFAMILY SSF47729 1 89 7.07E-27 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_1281 3185d14d17ae969696735173f9164bcf 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 6.7E-29 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1281 3185d14d17ae969696735173f9164bcf 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.8E-11 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1281 3185d14d17ae969696735173f9164bcf 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.8E-11 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1281 3185d14d17ae969696735173f9164bcf 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.8E-11 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2059 233149f3eb6116c4bbafee50ec78c499 180 Gene3D G3DSA:3.40.630.30 7 153 2.7E-25 T 23-10-2018 DLM_2059 233149f3eb6116c4bbafee50ec78c499 180 SUPERFAMILY SSF55729 9 140 1.83E-20 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_2059 233149f3eb6116c4bbafee50ec78c499 180 Pfam PF13673 Acetyltransferase (GNAT) domain 56 157 2.2E-11 T 23-10-2018 IPR000182 GNAT domain DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 SUPERFAMILY SSF52935 318 467 1.96E-32 T 23-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 Pfam PF02887 Pyruvate kinase, alpha/beta domain 354 467 2.6E-23 T 23-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 Gene3D G3DSA:2.40.33.10 71 167 8.5E-161 T 23-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 SUPERFAMILY SSF50800 71 166 6.11E-23 T 23-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 Gene3D G3DSA:3.20.20.60 3 330 8.5E-161 T 23-10-2018 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 PRINTS PR01050 Pyruvate kinase family signature 60 76 5.8E-64 T 23-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 PRINTS PR01050 Pyruvate kinase family signature 185 199 5.8E-64 T 23-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 PRINTS PR01050 Pyruvate kinase family signature 239 263 5.8E-64 T 23-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 PRINTS PR01050 Pyruvate kinase family signature 289 307 5.8E-64 T 23-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 PRINTS PR01050 Pyruvate kinase family signature 308 324 5.8E-64 T 23-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 PRINTS PR01050 Pyruvate kinase family signature 264 288 5.8E-64 T 23-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 PRINTS PR01050 Pyruvate kinase family signature 212 238 5.8E-64 T 23-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 466 4.5E-143 T 23-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 SUPERFAMILY SSF51621 2 339 1.26E-95 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 Pfam PF00224 Pyruvate kinase, barrel domain 3 336 4.3E-110 T 23-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 ProSitePatterns PS00110 Pyruvate kinase active site signature. 210 222 - T 23-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_3912 119b1a0157e30da1dd185b0637fd3666 469 Gene3D G3DSA:3.40.1380.20 331 465 8.5E-161 T 23-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 SUPERFAMILY SSF50331 266 391 2.68E-15 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 SMART SM00382 58 249 1.2E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 Gene3D G3DSA:3.40.50.300 33 251 2.5E-66 T 23-10-2018 DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 Pfam PF08402 TOBE domain 310 391 5.3E-17 T 23-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 Gene3D G3DSA:2.40.50.140 316 357 5.6E-10 T 23-10-2018 DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 64 391 5.1E-126 T 23-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 SUPERFAMILY SSF52540 34 272 1.73E-86 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 Gene3D G3DSA:2.40.50.940 252 315 5.6E-10 T 23-10-2018 DLM_2432 d61c2484603d4ca7b096da0aa57c50a2 393 Pfam PF00005 ABC transporter 50 191 5.1E-36 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0338 386deb738d9b7511dc7166b743119c30 460 Pfam PF14462 Prokaryotic E2 family E 335 456 3.2E-34 T 23-10-2018 IPR025701 Ubiquitin-conjugating enzyme, E2, family E DLM_0338 386deb738d9b7511dc7166b743119c30 460 Pfam PF14452 Multiubiquitin 119 175 4.5E-9 T 23-10-2018 IPR027802 Multi-ubiquitin domain DLM_0338 386deb738d9b7511dc7166b743119c30 460 Pfam PF14452 Multiubiquitin 182 247 2.1E-7 T 23-10-2018 IPR027802 Multi-ubiquitin domain DLM_0232 5856c47189c7300482fd11cd289adb6b 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.226 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DLM_0232 5856c47189c7300482fd11cd289adb6b 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.4E-41 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DLM_0232 5856c47189c7300482fd11cd289adb6b 90 PIRSF PIRSF029827 1 90 1.4E-38 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DLM_0232 5856c47189c7300482fd11cd289adb6b 90 SUPERFAMILY SSF111148 1 89 1.83E-37 T 23-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 DLM_0232 5856c47189c7300482fd11cd289adb6b 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 4.0E-37 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DLM_0232 5856c47189c7300482fd11cd289adb6b 90 Gene3D G3DSA:1.10.3880.10 1 90 7.3E-38 T 23-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 265 284 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 310 336 2.9E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 Pfam PF13416 Bacterial extracellular solute-binding protein 46 331 1.7E-34 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 SUPERFAMILY SSF53850 27 365 5.93E-100 T 23-10-2018 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 Gene3D G3DSA:3.40.190.10 30 332 4.9E-134 T 23-10-2018 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 Gene3D G3DSA:3.40.190.10 133 361 4.9E-134 T 23-10-2018 DLM_1164 c348d2c0b975e4a4a491b4686dae1574 366 PIRSF PIRSF019574 1 366 5.0E-136 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Gene3D G3DSA:3.30.565.10 427 610 3.5E-53 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 SMART SM01231 363 426 4.7E-18 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Gene3D G3DSA:1.20.120.160 1 136 4.3E-39 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 SUPERFAMILY SSF50341 610 741 6.54E-32 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Gene3D G3DSA:2.40.50.180 634 699 1.0E-38 T 23-10-2018 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Pfam PF01627 Hpt domain 9 101 2.3E-20 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 610 1.8E-14 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 SMART SM00073 5 102 1.4E-34 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 5.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 565 5.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 5.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 5.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 SUPERFAMILY SSF55874 429 609 3.27E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 SUPERFAMILY SSF47226 4 129 5.89E-32 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Gene3D G3DSA:2.30.30.40 611 740 1.0E-38 T 23-10-2018 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 SUPERFAMILY SSF47384 364 427 3.45E-14 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Gene3D G3DSA:1.10.287.560 364 426 1.9E-15 T 23-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 SMART SM00260 603 744 5.5E-37 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 364 426 2.4E-16 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 SMART SM00387 471 611 3.0E-26 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2890 ce68a4022962c2e4c3552348a3995efe 763 Pfam PF01584 CheW-like domain 616 745 3.9E-26 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_4195 5d8e7c61846be261d703b6c7152bfd1d 385 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 14 384 39.739 T 23-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4195 5d8e7c61846be261d703b6c7152bfd1d 385 Pfam PF01098 Cell cycle protein 19 377 2.8E-104 T 23-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4195 5d8e7c61846be261d703b6c7152bfd1d 385 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 17 375 4.5E-125 T 23-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 Gene3D G3DSA:3.30.70.920 59 153 5.5E-12 T 23-10-2018 DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 Pfam PF01037 Lrp/AsnC ligand binding domain 75 131 1.1E-7 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 9.2E-18 T 23-10-2018 DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 SUPERFAMILY SSF54909 69 149 1.23E-10 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 7.3E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 7.3E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 7.3E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 SMART SM00344 7 115 2.0E-29 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 Gene3D G3DSA:1.10.10.10 1 58 2.1E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1827 85396a1881857f8d36ce1b4c604c5ab6 156 SUPERFAMILY SSF46785 7 62 1.6E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1255 7fc22ca7920cae059fea2a5b8d44dc4a 383 SUPERFAMILY SSF69279 182 349 9.07E-53 T 23-10-2018 DLM_1255 7fc22ca7920cae059fea2a5b8d44dc4a 383 Gene3D G3DSA:3.30.1920.10 211 279 6.3E-118 T 23-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold DLM_1255 7fc22ca7920cae059fea2a5b8d44dc4a 383 PIRSF PIRSF004440 6 373 4.2E-51 T 23-10-2018 IPR026276 Baseplate protein GpP DLM_1255 7fc22ca7920cae059fea2a5b8d44dc4a 383 Gene3D G3DSA:3.55.50.10 98 181 6.3E-118 T 23-10-2018 DLM_1255 7fc22ca7920cae059fea2a5b8d44dc4a 383 SUPERFAMILY SSF69279 11 180 5.38E-49 T 23-10-2018 DLM_1255 7fc22ca7920cae059fea2a5b8d44dc4a 383 Gene3D G3DSA:2.30.300.10 18 344 6.3E-118 T 23-10-2018 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Gene3D G3DSA:3.40.50.1370 152 321 1.0E-134 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 1.3E-128 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 149 2.0E-45 T 23-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Gene3D G3DSA:3.40.50.1370 5 331 1.0E-134 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 5.5E-24 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 5.5E-24 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 5.5E-24 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 5.5E-24 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 125 139 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 SUPERFAMILY SSF53671 4 335 1.44E-95 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 332 8.5E-52 T 23-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DLM_2880 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 81.668 T 23-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Gene3D G3DSA:3.40.50.1370 152 321 1.0E-134 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 1.3E-128 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 149 2.0E-45 T 23-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Gene3D G3DSA:3.40.50.1370 5 331 1.0E-134 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 5.5E-24 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 5.5E-24 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 5.5E-24 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 5.5E-24 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 125 139 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 7.6E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 SUPERFAMILY SSF53671 4 335 1.44E-95 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 332 8.5E-52 T 23-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DLM_0119 0ee01db5354e7ab31c8f2d4bc0abb4fa 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 81.668 T 23-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 28 490 1.2E-167 T 23-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 Pfam PF01225 Mur ligase family, catalytic domain 28 103 6.1E-10 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 Gene3D G3DSA:3.40.1190.10 108 340 4.3E-84 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 Gene3D G3DSA:3.40.1390.10 12 107 2.5E-20 T 23-10-2018 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 1.5E-21 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 Pfam PF08245 Mur ligase middle domain 117 317 6.2E-53 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 SUPERFAMILY SSF53623 108 336 1.31E-79 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 8 490 34.798 T 23-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 Gene3D G3DSA:3.90.190.20 341 494 1.3E-55 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 SUPERFAMILY SSF53244 339 491 5.36E-47 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4191 a27dccaa9909a7c3583f125c96c0845d 497 SUPERFAMILY SSF63418 9 108 5.23E-20 T 23-10-2018 IPR035911 MurE/MurF, N-terminal DLM_2402 dff212c47367d011296de54f05d40490 118 Pfam PF00453 Ribosomal protein L20 3 109 1.5E-50 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2402 dff212c47367d011296de54f05d40490 118 Gene3D G3DSA:1.10.1900.20 56 118 2.9E-29 T 23-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2402 dff212c47367d011296de54f05d40490 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 4.0E-15 T 23-10-2018 DLM_2402 dff212c47367d011296de54f05d40490 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.514 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2402 dff212c47367d011296de54f05d40490 118 SUPERFAMILY SSF74731 2 116 7.72E-51 T 23-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2402 dff212c47367d011296de54f05d40490 118 Gene3D G3DSA:1.10.720.90 2 55 2.5E-26 T 23-10-2018 DLM_2402 dff212c47367d011296de54f05d40490 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2402 dff212c47367d011296de54f05d40490 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.5E-51 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2402 dff212c47367d011296de54f05d40490 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.9E-41 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2402 dff212c47367d011296de54f05d40490 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.9E-41 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2402 dff212c47367d011296de54f05d40490 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.9E-41 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 Gene3D G3DSA:3.40.50.300 13 177 1.7E-105 T 23-10-2018 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 SUPERFAMILY SSF52540 33 224 5.49E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 Gene3D G3DSA:3.30.300.150 509 632 1.3E-14 T 23-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 SUPERFAMILY SSF48019 244 365 2.55E-33 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 Gene3D G3DSA:1.10.8.60 8 240 1.7E-105 T 23-10-2018 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 368 6.7E-29 T 23-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 Gene3D G3DSA:1.20.272.10 242 361 1.0E-41 T 23-10-2018 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 7.0E-133 T 23-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 526 647 3.4E-14 T 23-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.1E-46 T 23-10-2018 DLM_2589 7d37c2b080a754b29f2746bbabb178c1 653 SMART SM00382 37 179 9.9E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4491 c36900153ba73fe91eb74c3af610e39e 396 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 391 5.1E-188 T 23-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 DLM_4491 c36900153ba73fe91eb74c3af610e39e 396 Gene3D G3DSA:3.90.1150.10 13 379 1.8E-118 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_4491 c36900153ba73fe91eb74c3af610e39e 396 Pfam PF00155 Aminotransferase class I and II 30 387 2.7E-51 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_4491 c36900153ba73fe91eb74c3af610e39e 396 SUPERFAMILY SSF53383 2 392 5.36E-91 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4491 c36900153ba73fe91eb74c3af610e39e 396 Gene3D G3DSA:3.40.640.10 42 287 1.8E-118 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3426 9601d8385e8fd84dd4a3eb9efb87f044 241 SUPERFAMILY SSF53850 13 238 7.97E-22 T 23-10-2018 DLM_3426 9601d8385e8fd84dd4a3eb9efb87f044 241 Gene3D G3DSA:3.40.190.10 109 201 1.6E-11 T 23-10-2018 DLM_3426 9601d8385e8fd84dd4a3eb9efb87f044 241 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 238 1.8E-9 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3426 9601d8385e8fd84dd4a3eb9efb87f044 241 Gene3D G3DSA:3.40.190.10 32 238 1.6E-11 T 23-10-2018 DLM_3214 46388806d9ab720adb7c5ec4c22a31a4 307 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 74 4.0E-13 T 23-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DLM_3214 46388806d9ab720adb7c5ec4c22a31a4 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 304 1.6E-31 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3214 46388806d9ab720adb7c5ec4c22a31a4 307 Gene3D G3DSA:1.10.3720.10 93 300 2.4E-24 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3214 46388806d9ab720adb7c5ec4c22a31a4 307 SUPERFAMILY SSF161098 98 285 3.14E-29 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3180 c87158e6308ef2923d914c66177f2c91 391 Gene3D G3DSA:3.30.70.270 221 386 2.0E-46 T 23-10-2018 DLM_3180 c87158e6308ef2923d914c66177f2c91 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 218 378 9.0E-40 T 23-10-2018 IPR000160 GGDEF domain DLM_3180 c87158e6308ef2923d914c66177f2c91 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 376 5.3E-36 T 23-10-2018 IPR000160 GGDEF domain DLM_3180 c87158e6308ef2923d914c66177f2c91 391 SMART SM00267 210 380 5.4E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_3180 c87158e6308ef2923d914c66177f2c91 391 SUPERFAMILY SSF55073 226 378 1.1E-39 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4322 459b226402ac3efa594d632ef4e80e77 288 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 204 279 8.2E-16 T 23-10-2018 IPR006260 TonB/TolA, C-terminal DLM_4322 459b226402ac3efa594d632ef4e80e77 288 SUPERFAMILY SSF74653 176 282 7.98E-19 T 23-10-2018 DLM_4322 459b226402ac3efa594d632ef4e80e77 288 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 202 279 2.0E-18 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 DLM_4257 658ae1bc14610d6d0a002393f8dd1436 498 SMART SM00316 51 129 8.3E-9 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_4257 658ae1bc14610d6d0a002393f8dd1436 498 SUPERFAMILY SSF50249 53 135 1.72E-17 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_4257 658ae1bc14610d6d0a002393f8dd1436 498 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 27 435 2.6E-154 T 23-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DLM_4257 658ae1bc14610d6d0a002393f8dd1436 498 Gene3D G3DSA:2.40.50.140 45 135 1.1E-29 T 23-10-2018 DLM_4257 658ae1bc14610d6d0a002393f8dd1436 498 Pfam PF10150 Ribonuclease E/G family 131 402 9.4E-102 T 23-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DLM_3094 21ba1e8c818483de13d638f2d9a39799 313 SUPERFAMILY SSF55811 5 130 5.01E-34 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_3094 21ba1e8c818483de13d638f2d9a39799 313 Gene3D G3DSA:3.90.79.10 2 130 2.5E-32 T 23-10-2018 DLM_3094 21ba1e8c818483de13d638f2d9a39799 313 PRINTS PR00502 NUDIX hydrolase family signature 51 66 8.4E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DLM_3094 21ba1e8c818483de13d638f2d9a39799 313 PRINTS PR00502 NUDIX hydrolase family signature 37 51 8.4E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DLM_3094 21ba1e8c818483de13d638f2d9a39799 313 Gene3D G3DSA:3.20.20.70 131 313 4.8E-43 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3094 21ba1e8c818483de13d638f2d9a39799 313 Pfam PF02581 Thiamine monophosphate synthase 135 310 2.8E-37 T 23-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DLM_3094 21ba1e8c818483de13d638f2d9a39799 313 Pfam PF00293 NUDIX domain 11 124 2.0E-16 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_3094 21ba1e8c818483de13d638f2d9a39799 313 SUPERFAMILY SSF51391 118 312 6.93E-43 T 23-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 362 9.6E-21 T 23-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 Gene3D G3DSA:3.40.120.10 1 149 3.8E-55 T 23-10-2018 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 SUPERFAMILY SSF53738 150 252 8.63E-32 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 Gene3D G3DSA:3.40.120.10 247 364 1.2E-41 T 23-10-2018 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 Gene3D G3DSA:3.40.120.10 169 246 3.1E-32 T 23-10-2018 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 137 7.2E-37 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 447 2.6E-11 T 23-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 23-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 SUPERFAMILY SSF53738 254 352 4.32E-31 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 250 1.2E-26 T 23-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 SUPERFAMILY SSF55957 363 451 8.2E-19 T 23-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 4.2E-23 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 4.2E-23 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 4.2E-23 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 4.2E-23 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 Gene3D G3DSA:3.30.310.50 365 458 9.9E-26 T 23-10-2018 DLM_1866 b99293c53feb4f7600ddbc7f7b1b39bb 458 SUPERFAMILY SSF53738 6 142 1.84E-41 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_1332 bf774aadc8215d4037ff5587289f5d07 449 Gene3D G3DSA:1.20.1600.10 24 439 7.0E-109 T 23-10-2018 DLM_1332 bf774aadc8215d4037ff5587289f5d07 449 Gene3D G3DSA:2.20.200.10 71 327 7.0E-109 T 23-10-2018 DLM_1332 bf774aadc8215d4037ff5587289f5d07 449 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 22 437 1.0E-83 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_1332 bf774aadc8215d4037ff5587289f5d07 449 Pfam PF02321 Outer membrane efflux protein 34 226 6.4E-17 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1332 bf774aadc8215d4037ff5587289f5d07 449 Pfam PF02321 Outer membrane efflux protein 255 436 6.0E-22 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1332 bf774aadc8215d4037ff5587289f5d07 449 SUPERFAMILY SSF56954 25 442 8.24E-85 T 23-10-2018 DLM_2649 e40434355bfe15428fe84fa55240bf2f 249 Gene3D G3DSA:2.30.110.50 15 140 4.0E-12 T 23-10-2018 DLM_2649 e40434355bfe15428fe84fa55240bf2f 249 SUPERFAMILY SSF69279 23 102 2.72E-8 T 23-10-2018 DLM_2649 e40434355bfe15428fe84fa55240bf2f 249 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 93 180 1.6E-29 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_3973 e83e06eca0ddb48dd1cb11028776b6d7 242 Pfam PF03167 Uracil DNA glycosylase superfamily 66 221 4.1E-20 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3973 e83e06eca0ddb48dd1cb11028776b6d7 242 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 17 233 36.329 T 23-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3973 e83e06eca0ddb48dd1cb11028776b6d7 242 SUPERFAMILY SSF52141 16 233 8.07E-83 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3973 e83e06eca0ddb48dd1cb11028776b6d7 242 SMART SM00987 62 222 9.5E-36 T 23-10-2018 DLM_3973 e83e06eca0ddb48dd1cb11028776b6d7 242 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 70 79 - T 23-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3973 e83e06eca0ddb48dd1cb11028776b6d7 242 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 18 226 2.2E-75 T 23-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3973 e83e06eca0ddb48dd1cb11028776b6d7 242 Gene3D G3DSA:3.40.470.10 11 237 8.7E-89 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3973 e83e06eca0ddb48dd1cb11028776b6d7 242 SMART SM00986 62 222 9.5E-36 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3044 6630435b6777f251ba8150d3ace44fc1 451 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 14 427 3.3E-128 T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DLM_3044 6630435b6777f251ba8150d3ace44fc1 451 TIGRFAM TIGR03173 pbuX: xanthine permease 22 430 5.7E-160 T 23-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 DLM_3044 6630435b6777f251ba8150d3ace44fc1 451 Pfam PF00860 Permease family 18 395 1.3E-109 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DLM_3044 6630435b6777f251ba8150d3ace44fc1 451 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 345 365 - T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DLM_1843 787378cd47b8b1932baa81bf28331404 750 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 194 747 6.6E-174 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 SUPERFAMILY SSF56784 445 744 2.11E-48 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1843 787378cd47b8b1932baa81bf28331404 750 Gene3D G3DSA:2.70.150.20 238 350 1.9E-35 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00941 Cadmium-transporting ATPase signature 175 187 1.2E-8 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00941 Cadmium-transporting ATPase signature 311 327 1.2E-8 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00941 Cadmium-transporting ATPase signature 229 249 1.2E-8 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00941 Cadmium-transporting ATPase signature 330 344 1.2E-8 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 SUPERFAMILY SSF81665 194 432 1.83E-15 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 217 723 9.5E-72 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 Gene3D G3DSA:3.40.50.1000 427 697 1.6E-80 T 23-10-2018 IPR023214 HAD superfamily DLM_1843 787378cd47b8b1932baa81bf28331404 750 Pfam PF00122 E1-E2 ATPase 245 426 2.1E-53 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 446 460 9.5E-25 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 668 680 9.5E-25 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 295 309 9.5E-25 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 570 581 9.5E-25 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 663 9.5E-25 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 592 602 9.5E-25 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 SUPERFAMILY SSF55008 53 122 1.54E-10 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DLM_1843 787378cd47b8b1932baa81bf28331404 750 Gene3D G3DSA:3.30.70.100 53 121 1.0E-6 T 23-10-2018 DLM_1843 787378cd47b8b1932baa81bf28331404 750 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 448 454 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 Gene3D G3DSA:3.40.1110.10 457 577 1.6E-80 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 Pfam PF00403 Heavy-metal-associated domain 61 117 5.6E-7 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DLM_1843 787378cd47b8b1932baa81bf28331404 750 SUPERFAMILY SSF81653 247 344 1.96E-23 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DLM_1843 787378cd47b8b1932baa81bf28331404 750 Pfam PF00702 haloacid dehalogenase-like hydrolase 444 658 4.2E-33 T 23-10-2018 DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 SUPERFAMILY SSF52540 333 553 9.69E-61 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 Gene3D G3DSA:3.40.50.300 2 237 3.6E-62 T 23-10-2018 DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 Gene3D G3DSA:3.40.50.300 327 558 4.0E-64 T 23-10-2018 DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 SUPERFAMILY SSF52540 6 230 1.54E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 Pfam PF00005 ABC transporter 351 494 1.1E-25 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 SMART SM00382 34 252 1.7E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 SMART SM00382 359 541 1.4E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3985 b67969bda0a8f0a3599a81a88da58fed 583 Pfam PF00005 ABC transporter 26 168 2.0E-27 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 Pfam PF00288 GHMP kinases N terminal domain 89 145 2.9E-11 T 23-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 SUPERFAMILY SSF54211 7 157 1.21E-45 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 SUPERFAMILY SSF55060 161 280 2.69E-30 T 23-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 Gene3D G3DSA:3.30.70.890 163 283 3.4E-29 T 23-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 Pfam PF08544 GHMP kinases C terminal 206 267 1.0E-11 T 23-10-2018 IPR013750 GHMP kinase, C-terminal domain DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 279 6.9E-83 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 Gene3D G3DSA:3.30.230.10 2 161 3.0E-54 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 PIRSF PIRSF010376 5 283 7.8E-87 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DLM_3412 7c23d9d91b00c88662c72d6e7cbfbdc9 283 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 276 33.397 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DLM_4175 c09e6e8955eead85e102d4658954135f 126 Gene3D G3DSA:2.170.150.70 3 115 6.3E-34 T 23-10-2018 DLM_4175 c09e6e8955eead85e102d4658954135f 126 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 98 4.6E-9 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DLM_4175 c09e6e8955eead85e102d4658954135f 126 SUPERFAMILY SSF51316 1 101 1.88E-33 T 23-10-2018 IPR011057 Mss4-like superfamily DLM_2572 fb190e67be362d3ab411e62643997f74 492 SMART SM00322 303 362 0.31 T 23-10-2018 IPR004087 K Homology domain GO:0003676 DLM_2572 fb190e67be362d3ab411e62643997f74 492 SMART SM00322 232 295 10.0 T 23-10-2018 IPR004087 K Homology domain GO:0003676 DLM_2572 fb190e67be362d3ab411e62643997f74 492 Gene3D G3DSA:3.30.1480.10 1 132 1.4E-43 T 23-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DLM_2572 fb190e67be362d3ab411e62643997f74 492 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.158 T 23-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DLM_2572 fb190e67be362d3ab411e62643997f74 492 Gene3D G3DSA:3.30.300.20 201 279 8.4E-30 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_2572 fb190e67be362d3ab411e62643997f74 492 Gene3D G3DSA:1.10.150.20 355 423 8.0E-27 T 23-10-2018 DLM_2572 fb190e67be362d3ab411e62643997f74 492 SUPERFAMILY SSF50249 136 201 1.88E-16 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2572 fb190e67be362d3ab411e62643997f74 492 Gene3D G3DSA:2.40.50.140 139 200 7.7E-20 T 23-10-2018 DLM_2572 fb190e67be362d3ab411e62643997f74 492 Gene3D G3DSA:1.10.150.20 431 489 1.2E-19 T 23-10-2018 DLM_2572 fb190e67be362d3ab411e62643997f74 492 SUPERFAMILY SSF54814 202 279 9.16E-27 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DLM_2572 fb190e67be362d3ab411e62643997f74 492 Gene3D G3DSA:3.30.300.20 281 348 2.9E-26 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_2572 fb190e67be362d3ab411e62643997f74 492 Pfam PF14520 Helix-hairpin-helix domain 432 487 1.6E-10 T 23-10-2018 DLM_2572 fb190e67be362d3ab411e62643997f74 492 SUPERFAMILY SSF47794 357 419 7.22E-17 T 23-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DLM_2572 fb190e67be362d3ab411e62643997f74 492 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 2.7E-19 T 23-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DLM_2572 fb190e67be362d3ab411e62643997f74 492 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.6E-14 T 23-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DLM_2572 fb190e67be362d3ab411e62643997f74 492 SUPERFAMILY SSF47794 429 491 9.89E-15 T 23-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DLM_2572 fb190e67be362d3ab411e62643997f74 492 Pfam PF08529 NusA N-terminal domain 4 127 9.3E-39 T 23-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DLM_2572 fb190e67be362d3ab411e62643997f74 492 SUPERFAMILY SSF69705 1 128 8.5E-38 T 23-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DLM_2572 fb190e67be362d3ab411e62643997f74 492 Pfam PF13184 NusA-like KH domain 232 300 9.0E-26 T 23-10-2018 IPR025249 KH domain, NusA-like GO:0003723 DLM_2572 fb190e67be362d3ab411e62643997f74 492 SMART SM00316 136 202 4.3E-7 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2572 fb190e67be362d3ab411e62643997f74 492 SUPERFAMILY SSF54814 281 344 6.21E-16 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DLM_2572 fb190e67be362d3ab411e62643997f74 492 Pfam PF00575 S1 RNA binding domain 141 197 4.2E-5 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_2572 fb190e67be362d3ab411e62643997f74 492 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 343 3.8E-125 T 23-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 DLM_2239 2af15070e3eae2a531322085e9566477 388 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 225 386 3.7E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_2239 2af15070e3eae2a531322085e9566477 388 SMART SM00267 216 387 1.8E-52 T 23-10-2018 IPR000160 GGDEF domain DLM_2239 2af15070e3eae2a531322085e9566477 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 383 1.0E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_2239 2af15070e3eae2a531322085e9566477 388 SUPERFAMILY SSF55073 232 386 2.12E-44 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2239 2af15070e3eae2a531322085e9566477 388 Gene3D G3DSA:3.30.70.270 223 387 1.9E-50 T 23-10-2018 DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 Gene3D G3DSA:3.30.70.920 57 139 9.7E-26 T 23-10-2018 DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 1.6E-13 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 SUPERFAMILY SSF46785 2 62 4.28E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 SUPERFAMILY SSF54909 63 152 8.04E-21 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 5.3E-23 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 SMART SM00344 3 112 1.7E-34 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.3E-11 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.3E-11 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.3E-11 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2716 bdc86ac3d8fc58723b5c948e8449d32a 157 Gene3D G3DSA:1.10.10.10 1 56 3.6E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3112 a3827ce114330a285ad6b388211026ec 942 SUPERFAMILY SSF46548 506 631 4.36E-21 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_3112 a3827ce114330a285ad6b388211026ec 942 Gene3D G3DSA:3.30.70.3270 527 653 1.0E-11 T 23-10-2018 DLM_3112 a3827ce114330a285ad6b388211026ec 942 Gene3D G3DSA:3.30.465.40 9 204 5.3E-30 T 23-10-2018 DLM_3112 a3827ce114330a285ad6b388211026ec 942 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 601 612 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_3112 a3827ce114330a285ad6b388211026ec 942 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 544 555 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_3112 a3827ce114330a285ad6b388211026ec 942 Pfam PF02754 Cysteine-rich domain 711 805 0.0033 T 23-10-2018 IPR004017 Cysteine-rich domain DLM_3112 a3827ce114330a285ad6b388211026ec 942 SUPERFAMILY SSF55103 271 522 4.41E-52 T 23-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DLM_3112 a3827ce114330a285ad6b388211026ec 942 Pfam PF01565 FAD binding domain 43 179 3.6E-31 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DLM_3112 a3827ce114330a285ad6b388211026ec 942 SUPERFAMILY SSF56176 9 265 4.09E-58 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_3112 a3827ce114330a285ad6b388211026ec 942 Pfam PF02913 FAD linked oxidases, C-terminal domain 270 517 7.5E-51 T 23-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DLM_3112 a3827ce114330a285ad6b388211026ec 942 Gene3D G3DSA:3.30.70.2740 396 479 8.2E-7 T 23-10-2018 DLM_3112 a3827ce114330a285ad6b388211026ec 942 Pfam PF12838 4Fe-4S dicluster domain 543 615 9.2E-12 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_1019 713ffa531227531e061d6b4853f9c493 406 PIRSF PIRSF000429 13 406 1.2E-121 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_1019 713ffa531227531e061d6b4853f9c493 406 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 100 118 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DLM_1019 713ffa531227531e061d6b4853f9c493 406 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 21 404 4.4E-129 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_1019 713ffa531227531e061d6b4853f9c493 406 ProSitePatterns PS00737 Thiolases signature 2. 352 368 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DLM_1019 713ffa531227531e061d6b4853f9c493 406 SUPERFAMILY SSF53901 284 405 9.92E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1019 713ffa531227531e061d6b4853f9c493 406 Pfam PF00108 Thiolase, N-terminal domain 19 273 2.2E-82 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DLM_1019 713ffa531227531e061d6b4853f9c493 406 Gene3D G3DSA:3.40.47.10 21 289 2.7E-143 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1019 713ffa531227531e061d6b4853f9c493 406 Gene3D G3DSA:3.40.47.10 142 403 2.7E-143 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1019 713ffa531227531e061d6b4853f9c493 406 SUPERFAMILY SSF53901 18 282 3.76E-75 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_1019 713ffa531227531e061d6b4853f9c493 406 Pfam PF02803 Thiolase, C-terminal domain 284 405 1.6E-44 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DLM_1019 713ffa531227531e061d6b4853f9c493 406 ProSitePatterns PS00099 Thiolases active site. 387 400 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 DLM_3232 0a7c26b10710c13e9970fd7c34469221 491 Pfam PF07969 Amidohydrolase family 47 458 1.4E-49 T 23-10-2018 IPR013108 Amidohydrolase 3 DLM_3232 0a7c26b10710c13e9970fd7c34469221 491 Gene3D G3DSA:3.30.1490.130 285 341 1.8E-168 T 23-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 DLM_3232 0a7c26b10710c13e9970fd7c34469221 491 Gene3D G3DSA:2.30.40.10 5 430 1.8E-168 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_3232 0a7c26b10710c13e9970fd7c34469221 491 Gene3D G3DSA:3.20.20.140 57 416 1.8E-168 T 23-10-2018 DLM_3232 0a7c26b10710c13e9970fd7c34469221 491 SUPERFAMILY SSF51338 4 476 1.39E-17 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_3232 0a7c26b10710c13e9970fd7c34469221 491 SUPERFAMILY SSF51556 58 416 1.33E-81 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_1730 1d633e6d35ade244f76601e94723d179 215 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 5 202 3.0E-51 T 23-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DLM_1730 1d633e6d35ade244f76601e94723d179 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 179 2.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1730 1d633e6d35ade244f76601e94723d179 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 130 184 1.7E-9 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1730 1d633e6d35ade244f76601e94723d179 215 Gene3D G3DSA:1.10.150.240 17 84 9.1E-51 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DLM_1730 1d633e6d35ade244f76601e94723d179 215 Gene3D G3DSA:3.40.50.1000 5 193 9.1E-51 T 23-10-2018 IPR023214 HAD superfamily DLM_1730 1d633e6d35ade244f76601e94723d179 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1730 1d633e6d35ade244f76601e94723d179 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1730 1d633e6d35ade244f76601e94723d179 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1730 1d633e6d35ade244f76601e94723d179 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1730 1d633e6d35ade244f76601e94723d179 215 SUPERFAMILY SSF56784 1 215 7.35E-54 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1730 1d633e6d35ade244f76601e94723d179 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 3.5E-31 T 23-10-2018 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 4.2E-209 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 Gene3D G3DSA:3.30.390.10 1 127 4.8E-57 T 23-10-2018 IPR029017 Enolase-like, N-terminal DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 4.9E-131 T 23-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 SMART SM01192 139 425 7.6E-224 T 23-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 SUPERFAMILY SSF54826 3 136 3.7E-57 T 23-10-2018 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 Gene3D G3DSA:3.20.20.120 128 427 3.9E-134 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 PRINTS PR00148 Enolase signature 334 348 1.5E-45 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 PRINTS PR00148 Enolase signature 161 174 1.5E-45 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 PRINTS PR00148 Enolase signature 107 123 1.5E-45 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 PRINTS PR00148 Enolase signature 37 51 1.5E-45 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 PRINTS PR00148 Enolase signature 311 322 1.5E-45 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 PRINTS PR00148 Enolase signature 363 380 1.5E-45 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 SUPERFAMILY SSF51604 139 425 1.16E-128 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 23-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 PIRSF PIRSF001400 1 425 4.2E-191 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 SMART SM01193 4 134 1.2E-96 T 23-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 Pfam PF03952 Enolase, N-terminal domain 4 134 1.6E-60 T 23-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2909 1014333354f6b900d07ebbfdfdd1ce36 427 Hamap MF_00318 Enolase [eno]. 2 411 45.19 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 Gene3D G3DSA:3.20.20.10 10 216 3.4E-122 T 23-10-2018 IPR029066 PLP-binding barrel DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 Gene3D G3DSA:2.40.37.10 8 349 3.4E-122 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 191 218 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 338 351 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 25 41 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 60 78 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 120 132 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 154 165 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 248 263 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 265 280 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 PRINTS PR00992 Alanine racemase signature 286 303 2.1E-61 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 SUPERFAMILY SSF51419 8 233 3.05E-64 T 23-10-2018 IPR029066 PLP-binding barrel DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 SUPERFAMILY SSF50621 227 349 6.63E-45 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 3.2E-63 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 23-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 Pfam PF00842 Alanine racemase, C-terminal domain 232 349 1.4E-41 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 TIGRFAM TIGR00492 alr: alanine racemase 4 349 1.6E-100 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 Hamap MF_01201 Alanine racemase. 1 355 33.056 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_2650 ff25e07fa62c608509da30b3814f01c0 355 SMART SM01005 232 355 9.5E-65 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_3854 648ffec11c36b4007217a2e000ed3663 321 Gene3D G3DSA:3.40.50.1820 14 315 7.9E-72 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3854 648ffec11c36b4007217a2e000ed3663 321 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 156 168 - T 23-10-2018 IPR033140 Lipase, GDXG, putative serine active site DLM_3854 648ffec11c36b4007217a2e000ed3663 321 SUPERFAMILY SSF53474 34 311 2.18E-61 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3854 648ffec11c36b4007217a2e000ed3663 321 Pfam PF07859 alpha/beta hydrolase fold 83 288 1.8E-54 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DLM_2222 4cb42f7b5b6413a5667df3e363efa6e1 279 Gene3D G3DSA:3.30.950.10 111 230 7.2E-39 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DLM_2222 4cb42f7b5b6413a5667df3e363efa6e1 279 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 249 1.3E-101 T 23-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 DLM_2222 4cb42f7b5b6413a5667df3e363efa6e1 279 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_2222 4cb42f7b5b6413a5667df3e363efa6e1 279 SUPERFAMILY SSF53790 2 232 2.22E-62 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_2222 4cb42f7b5b6413a5667df3e363efa6e1 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 208 1.0E-47 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_2222 4cb42f7b5b6413a5667df3e363efa6e1 279 Gene3D G3DSA:3.40.1010.10 1 110 5.7E-27 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_2222 4cb42f7b5b6413a5667df3e363efa6e1 279 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3633 07c9e8a9ff2495e20dfffa9fbc140182 170 SUPERFAMILY SSF54211 4 166 9.86E-52 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_3633 07c9e8a9ff2495e20dfffa9fbc140182 170 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 7 164 1.9E-51 T 23-10-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 DLM_3633 07c9e8a9ff2495e20dfffa9fbc140182 170 Gene3D G3DSA:3.30.230.60 3 167 2.0E-54 T 23-10-2018 IPR037075 Formaldehyde-activating enzyme superfamily GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 DLM_3633 07c9e8a9ff2495e20dfffa9fbc140182 170 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 6 160 2.2E-42 T 23-10-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 Pfam PF00072 Response regulator receiver domain 37 150 7.5E-14 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 Gene3D G3DSA:3.40.50.2300 36 166 4.8E-19 T 23-10-2018 DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 SMART SM00448 34 150 6.9E-13 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 Gene3D G3DSA:1.25.40.10 475 567 1.2E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 SUPERFAMILY SSF52172 36 162 7.54E-20 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 Gene3D G3DSA:1.25.40.10 296 474 3.0E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 Gene3D G3DSA:1.25.40.10 174 295 5.8E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 SUPERFAMILY SSF48452 460 563 6.78E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4267 3a9b4ce8eb80921f7f59e53cc137143b 570 SUPERFAMILY SSF48452 193 353 4.6E-14 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_2447 a0dc31d5a9a1fa77b2316596165ee49e 136 Pfam PF00460 Flagella basal body rod protein 9 39 3.7E-11 T 23-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DLM_2447 a0dc31d5a9a1fa77b2316596165ee49e 136 PIRSF PIRSF002889 1 134 3.0E-46 T 23-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DLM_2447 a0dc31d5a9a1fa77b2316596165ee49e 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 23-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DLM_2447 a0dc31d5a9a1fa77b2316596165ee49e 136 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 7 131 1.8E-39 T 23-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DLM_4158 f0f8b394e4cbbc6b7dd5e677525f3ac4 679 Pfam PF05140 ResB-like family 25 665 2.3E-152 T 23-10-2018 IPR007816 ResB-like domain DLM_2633 5a87c61506aec7705383ad59f156a746 319 Gene3D G3DSA:2.180.10.10 3 211 2.1E-37 T 23-10-2018 DLM_2633 5a87c61506aec7705383ad59f156a746 319 PRINTS PR00394 RHS protein signature 179 198 2.2E-8 T 23-10-2018 IPR001826 RHS protein DLM_2633 5a87c61506aec7705383ad59f156a746 319 PRINTS PR00394 RHS protein signature 97 117 2.2E-8 T 23-10-2018 IPR001826 RHS protein DLM_2633 5a87c61506aec7705383ad59f156a746 319 Pfam PF14427 Pput_2613-like deaminase 214 314 3.0E-38 T 23-10-2018 IPR027472 Pput2613-like deaminase DLM_2633 5a87c61506aec7705383ad59f156a746 319 Pfam PF03527 RHS protein 103 138 8.1E-14 T 23-10-2018 IPR001826 RHS protein DLM_2633 5a87c61506aec7705383ad59f156a746 319 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 130 211 2.5E-29 T 23-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DLM_3166 b9bbd2d06a4115a7f6b34c9587c8f2a9 263 Gene3D G3DSA:3.20.20.140 1 258 7.3E-94 T 23-10-2018 DLM_3166 b9bbd2d06a4115a7f6b34c9587c8f2a9 263 PIRSF PIRSF005902 1 255 7.0E-83 T 23-10-2018 IPR001130 TatD family GO:0016788 DLM_3166 b9bbd2d06a4115a7f6b34c9587c8f2a9 263 SUPERFAMILY SSF51556 1 252 5.9E-90 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_3166 b9bbd2d06a4115a7f6b34c9587c8f2a9 263 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 2.1E-88 T 23-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DLM_3166 b9bbd2d06a4115a7f6b34c9587c8f2a9 263 Pfam PF01026 TatD related DNase 3 252 1.3E-80 T 23-10-2018 IPR001130 TatD family GO:0016788 DLM_3166 b9bbd2d06a4115a7f6b34c9587c8f2a9 263 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 SMART SM00996 6 465 0.0 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 SUPERFAMILY SSF52283 4 466 8.5E-113 T 23-10-2018 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 PIRSF PIRSF001109 1 466 2.6E-189 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 227 386 3.7E-84 T 23-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 Gene3D G3DSA:3.40.50.720 229 386 3.3E-239 T 23-10-2018 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 SMART SM00997 227 386 4.7E-114 T 23-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 458 48.972 T 23-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 458 2.4E-186 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 249 265 - T 23-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 465 7.8E-144 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 23-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 SUPERFAMILY SSF51735 227 386 3.18E-81 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3361 8a2c35d0895da6fed7d35816bc0ba0d0 466 Gene3D G3DSA:3.40.50.1480 7 466 3.3E-239 T 23-10-2018 DLM_3032 e20a5fa6025186eea0186c0a2cbaeddc 531 SUPERFAMILY SSF51645 5 530 1.83E-188 T 23-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DLM_3032 e20a5fa6025186eea0186c0a2cbaeddc 531 Gene3D G3DSA:1.20.1220.12 411 530 6.9E-45 T 23-10-2018 DLM_3032 e20a5fa6025186eea0186c0a2cbaeddc 531 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 22 530 4.2E-234 T 23-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DLM_3032 e20a5fa6025186eea0186c0a2cbaeddc 531 Pfam PF01274 Malate synthase 11 530 3.1E-199 T 23-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DLM_3032 e20a5fa6025186eea0186c0a2cbaeddc 531 ProSitePatterns PS00510 Malate synthase signature. 264 279 - T 23-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DLM_3032 e20a5fa6025186eea0186c0a2cbaeddc 531 Gene3D G3DSA:3.20.20.360 4 408 3.3E-186 T 23-10-2018 DLM_3032 e20a5fa6025186eea0186c0a2cbaeddc 531 PIRSF PIRSF001363 1 531 5.6E-250 T 23-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 SUPERFAMILY SSF52540 470 622 7.03E-22 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 SUPERFAMILY SSF52540 203 380 4.96E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 SMART SM00487 203 402 6.4E-15 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 Gene3D G3DSA:1.10.8.630 22 127 9.7E-25 T 23-10-2018 DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 SMART SM00490 502 599 7.2E-7 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 Gene3D G3DSA:3.40.50.300 200 388 2.6E-73 T 23-10-2018 DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 Pfam PF00271 Helicase conserved C-terminal domain 514 598 9.6E-7 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 Gene3D G3DSA:3.40.50.300 409 632 2.9E-16 T 23-10-2018 DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 TIGRFAM TIGR00595 priA: primosomal protein N' 229 738 4.3E-171 T 23-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 Hamap MF_00983 Probable primosomal protein N' [priA]. 25 741 23.603 T 23-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DLM_0156 c6ff7ef6a7ac6060ac2bbbdfa6ea818e 741 Pfam PF00270 DEAD/DEAH box helicase 210 375 4.2E-13 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 Gene3D G3DSA:1.10.1020.10 58 151 1.3E-44 T 23-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 Gene3D G3DSA:3.40.50.150 7 223 1.3E-44 T 23-10-2018 DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 PIRSF PIRSF000398 1 259 2.9E-46 T 23-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 SUPERFAMILY SSF53335 4 255 1.08E-57 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 223 5.5E-22 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 171 183 5.4E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 5.4E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 5.4E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2663 402b0dd26c7d80242eb8e6597e67aec5 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 5.4E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.3E-17 T 23-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 593 33.536 T 23-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 Gene3D G3DSA:3.30.930.10 117 590 1.4E-193 T 23-10-2018 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 Gene3D G3DSA:3.30.1360.30 272 429 1.4E-193 T 23-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 592 7.2E-240 T 23-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 Gene3D G3DSA:2.40.50.140 1 106 1.4E-33 T 23-10-2018 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 SUPERFAMILY SSF55261 291 422 2.18E-39 T 23-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 1.1E-25 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 1.1E-25 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 527 541 1.1E-25 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 483 499 1.1E-25 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 SUPERFAMILY SSF50249 1 105 1.18E-32 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 Pfam PF02938 GAD domain 309 410 4.3E-28 T 23-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 567 4.3E-108 T 23-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3182 0ee69be257cd39fe7df5833e7804b2c4 600 SUPERFAMILY SSF55681 110 594 1.1E-102 T 23-10-2018 DLM_0420 5af78f471536d7a780beee83ed65a47a 316 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 308 7.4E-59 T 23-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DLM_0420 5af78f471536d7a780beee83ed65a47a 316 SUPERFAMILY SSF51412 3 309 9.68E-80 T 23-10-2018 DLM_0420 5af78f471536d7a780beee83ed65a47a 316 SMART SM01240 4 315 7.0E-72 T 23-10-2018 DLM_0420 5af78f471536d7a780beee83ed65a47a 316 Gene3D G3DSA:3.20.20.70 1 316 5.2E-93 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0420 5af78f471536d7a780beee83ed65a47a 316 PIRSF PIRSF036500 1 316 5.7E-149 T 23-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DLM_0420 5af78f471536d7a780beee83ed65a47a 316 Hamap MF_01511 GMP reductase [guaC]. 3 316 54.388 T 23-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DLM_1909 50d32efc45470809fbbeb9f9a061c9e0 252 SUPERFAMILY SSF53850 2 249 5.18E-70 T 23-10-2018 DLM_1909 50d32efc45470809fbbeb9f9a061c9e0 252 Gene3D G3DSA:3.40.190.10 114 210 3.8E-75 T 23-10-2018 DLM_1909 50d32efc45470809fbbeb9f9a061c9e0 252 SMART SM00062 31 249 2.9E-75 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1909 50d32efc45470809fbbeb9f9a061c9e0 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 248 3.3E-64 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1909 50d32efc45470809fbbeb9f9a061c9e0 252 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 54 67 - T 23-10-2018 IPR018313 Solute-binding protein family 3, conserved site DLM_1909 50d32efc45470809fbbeb9f9a061c9e0 252 Gene3D G3DSA:3.40.190.10 30 241 3.8E-75 T 23-10-2018 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 SUPERFAMILY SSF52540 132 370 1.97E-70 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 SMART SM00448 3 114 1.5E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 Gene3D G3DSA:3.40.50.2300 2 119 5.2E-28 T 23-10-2018 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 Gene3D G3DSA:1.10.10.60 382 441 5.7E-13 T 23-10-2018 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 SUPERFAMILY SSF52172 3 174 4.55E-37 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 404 421 1.2E-5 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 441 1.2E-5 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 Pfam PF00072 Response regulator receiver domain 5 114 9.5E-22 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 Gene3D G3DSA:3.40.50.300 120 300 3.1E-66 T 23-10-2018 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 SUPERFAMILY SSF46689 342 438 5.02E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 Pfam PF00158 Sigma-54 interaction domain 131 295 4.0E-68 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 Gene3D G3DSA:1.10.8.60 301 377 3.0E-22 T 23-10-2018 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 SMART SM00382 149 293 3.9E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 Pfam PF02954 Bacterial regulatory protein, Fis family 400 438 3.0E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_0967 96c0b319b82617eea282d5a7f9158c69 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DLM_2738 281dcfce221a8418627e190817518d12 407 Gene3D G3DSA:3.30.450.20 130 248 1.4E-16 T 23-10-2018 DLM_2738 281dcfce221a8418627e190817518d12 407 Pfam PF08448 PAS fold 146 241 1.9E-7 T 23-10-2018 IPR013656 PAS fold-4 DLM_2738 281dcfce221a8418627e190817518d12 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 402 4.1E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_2738 281dcfce221a8418627e190817518d12 407 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 246 3.0E-13 T 23-10-2018 IPR000014 PAS domain DLM_2738 281dcfce221a8418627e190817518d12 407 SMART SM00267 239 407 1.5E-60 T 23-10-2018 IPR000160 GGDEF domain DLM_2738 281dcfce221a8418627e190817518d12 407 Pfam PF13188 PAS domain 5 35 0.018 T 23-10-2018 IPR000014 PAS domain DLM_2738 281dcfce221a8418627e190817518d12 407 SMART SM00091 126 195 5.6E-6 T 23-10-2018 IPR000014 PAS domain DLM_2738 281dcfce221a8418627e190817518d12 407 SMART SM00091 1 69 4.2 T 23-10-2018 IPR000014 PAS domain DLM_2738 281dcfce221a8418627e190817518d12 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 405 1.9E-50 T 23-10-2018 IPR000160 GGDEF domain DLM_2738 281dcfce221a8418627e190817518d12 407 SUPERFAMILY SSF55785 147 248 4.89E-17 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2738 281dcfce221a8418627e190817518d12 407 Gene3D G3DSA:3.30.70.270 249 407 1.6E-55 T 23-10-2018 DLM_2738 281dcfce221a8418627e190817518d12 407 SUPERFAMILY SSF55073 255 405 2.59E-48 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 180 5.4E-4 T 23-10-2018 DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 Gene3D G3DSA:3.40.50.720 3 257 8.4E-69 T 23-10-2018 DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.7E-34 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.7E-34 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.7E-34 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.7E-34 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.7E-34 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 3.7E-34 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 4.0E-57 T 23-10-2018 DLM_0628 b14b545225b9b2236a34ccbe1a6a4a93 263 SUPERFAMILY SSF51735 5 252 4.8E-69 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 SUPERFAMILY SSF55781 70 336 5.3E-60 T 23-10-2018 DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 Gene3D G3DSA:3.30.450.40 103 333 1.0E-38 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 334 7.4E-95 T 23-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 PIRSF PIRSF005485 1 337 1.3E-102 T 23-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 Pfam PF01628 HrcA protein C terminal domain 102 321 1.8E-57 T 23-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 328 26.27 T 23-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 SUPERFAMILY SSF46785 1 83 3.45E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 Gene3D G3DSA:1.10.10.10 1 83 1.9E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2591 cc3e9b7b23d82a0f61bcd9828366d31e 337 Gene3D G3DSA:3.30.390.60 125 225 1.0E-38 T 23-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily DLM_2751 00d3c22bcfa2df59ea071ab84f98727b 398 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 26 379 2.1E-183 T 23-10-2018 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ DLM_2751 00d3c22bcfa2df59ea071ab84f98727b 398 PIRSF PIRSF037420 14 389 1.3E-130 T 23-10-2018 IPR017200 Coenzyme PQQ synthesis protein E DLM_2751 00d3c22bcfa2df59ea071ab84f98727b 398 Pfam PF13353 4Fe-4S single cluster domain 29 115 1.2E-8 T 23-10-2018 DLM_2751 00d3c22bcfa2df59ea071ab84f98727b 398 SUPERFAMILY SSF102114 27 351 1.01E-64 T 23-10-2018 DLM_2751 00d3c22bcfa2df59ea071ab84f98727b 398 Pfam PF04055 Radical SAM superfamily 33 187 3.8E-24 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_2751 00d3c22bcfa2df59ea071ab84f98727b 398 SMART SM00729 27 229 0.0026 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_2751 00d3c22bcfa2df59ea071ab84f98727b 398 Gene3D G3DSA:3.20.20.70 28 240 1.6E-46 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0061 6ed17679817bae9f28565b50aac372ac 498 Pfam PF00361 Proton-conducting membrane transporter 131 423 4.2E-81 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0061 6ed17679817bae9f28565b50aac372ac 498 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 492 2.1E-190 T 23-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0061 6ed17679817bae9f28565b50aac372ac 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 383 409 4.3E-47 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0061 6ed17679817bae9f28565b50aac372ac 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 4.3E-47 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0061 6ed17679817bae9f28565b50aac372ac 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 331 350 4.3E-47 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0061 6ed17679817bae9f28565b50aac372ac 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 4.3E-47 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0061 6ed17679817bae9f28565b50aac372ac 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 4.3E-47 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3317 8b62efdcb55f4a4348703fb62e14c2f7 650 Pfam PF01841 Transglutaminase-like superfamily 368 461 1.5E-22 T 23-10-2018 IPR002931 Transglutaminase-like DLM_3317 8b62efdcb55f4a4348703fb62e14c2f7 650 Pfam PF11992 Domain of unknown function (DUF3488) 13 313 9.9E-85 T 23-10-2018 IPR021878 Protein of unknown function DUF3488 DLM_3317 8b62efdcb55f4a4348703fb62e14c2f7 650 SMART SM00460 391 463 3.2E-19 T 23-10-2018 IPR002931 Transglutaminase-like DLM_3317 8b62efdcb55f4a4348703fb62e14c2f7 650 SUPERFAMILY SSF54001 328 565 3.08E-51 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DLM_3317 8b62efdcb55f4a4348703fb62e14c2f7 650 Gene3D G3DSA:3.10.620.30 338 491 3.6E-20 T 23-10-2018 DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 494 4.0E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 Pfam PF00512 His Kinase A (phospho-acceptor) domain 306 369 5.2E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 Gene3D G3DSA:1.10.287.130 290 365 1.9E-15 T 23-10-2018 DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 Gene3D G3DSA:3.30.565.10 366 508 3.6E-28 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 SUPERFAMILY SSF47384 300 369 5.3E-13 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 SUPERFAMILY SSF55874 371 503 7.33E-30 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 SMART SM00388 306 371 2.0E-14 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 478 5.3E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 5.3E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 464 5.3E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4042 29b84d1680aadf956e1c0f8b807f9c98 517 SMART SM00387 412 516 1.7E-24 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 1.3E-34 T 23-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 1.3E-34 T 23-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 1.3E-34 T 23-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 1.3E-34 T 23-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 Gene3D G3DSA:2.30.40.10 3 479 3.9E-299 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 2.3E-298 T 23-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 SUPERFAMILY SSF51556 128 566 7.79E-204 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 SUPERFAMILY SSF51338 421 476 4.86E-6 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 2.2E-54 T 23-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 SUPERFAMILY SSF51338 2 176 3.41E-62 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 23-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 Pfam PF01979 Amidohydrolase family 124 452 8.9E-80 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 Gene3D G3DSA:3.20.20.140 128 566 3.9E-299 T 23-10-2018 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 23-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1375 4dde3e80f35dd25d8ad09eb5f8c23046 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 57.459 T 23-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_0497 943a3bee65aec893454d2ebd0cc5254f 206 SUPERFAMILY SSF53213 2 206 2.88E-67 T 23-10-2018 DLM_0497 943a3bee65aec893454d2ebd0cc5254f 206 Gene3D G3DSA:3.40.830.10 1 206 1.1E-66 T 23-10-2018 DLM_0497 943a3bee65aec893454d2ebd0cc5254f 206 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 2 202 1.3E-35 T 23-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DLM_2568 bfca24a37fa30fb99752b9456faa24de 89 Pfam PF00312 Ribosomal protein S15 8 88 3.8E-38 T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_2568 bfca24a37fa30fb99752b9456faa24de 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.3E-40 T 23-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2568 bfca24a37fa30fb99752b9456faa24de 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_2568 bfca24a37fa30fb99752b9456faa24de 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-35 T 23-10-2018 DLM_2568 bfca24a37fa30fb99752b9456faa24de 89 SMART SM01387 8 88 3.1E-53 T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_2568 bfca24a37fa30fb99752b9456faa24de 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.377 T 23-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2568 bfca24a37fa30fb99752b9456faa24de 89 SUPERFAMILY SSF47060 3 89 7.65E-36 T 23-10-2018 IPR009068 S15/NS1, RNA-binding DLM_2568 bfca24a37fa30fb99752b9456faa24de 89 Gene3D G3DSA:1.10.287.10 1 89 3.5E-36 T 23-10-2018 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.2E-73 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 668 870 5.5E-35 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 SUPERFAMILY SSF52440 551 670 1.17E-49 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Gene3D G3DSA:3.30.470.20 119 402 2.7E-127 T 23-10-2018 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1046 0.0 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Gene3D G3DSA:3.40.50.20 1 116 2.0E-49 T 23-10-2018 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Gene3D G3DSA:3.40.50.20 549 657 2.3E-49 T 23-10-2018 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Gene3D G3DSA:1.10.1030.10 403 548 1.8E-44 T 23-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 SUPERFAMILY SSF52335 930 1066 1.96E-39 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Gene3D G3DSA:3.40.50.1380 931 1068 1.2E-38 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 422 542 3.1E-38 T 23-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 SMART SM01096 419 542 2.3E-73 T 23-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1058 13.133 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 SUPERFAMILY SSF48108 397 548 1.31E-51 T 23-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 SUPERFAMILY SSF52440 1 127 2.88E-50 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 SUPERFAMILY SSF56059 128 401 4.95E-108 T 23-10-2018 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 9.0E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 9.0E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 9.0E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 9.0E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 9.0E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 9.0E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 9.0E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 704 718 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Gene3D G3DSA:3.30.470.20 660 930 1.3E-120 T 23-10-2018 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 SUPERFAMILY SSF56059 668 928 9.55E-105 T 23-10-2018 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1063 13.388 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 SMART SM00851 950 1037 1.6E-36 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain DLM_0097 57c864232ebba29f21359adc2df7cd7c 1069 Pfam PF02142 MGS-like domain 951 1037 9.7E-24 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain DLM_4453 8e8391cb937b1f7b3895b555fada1d73 365 Pfam PF00534 Glycosyl transferases group 1 180 342 5.2E-18 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 DLM_4453 8e8391cb937b1f7b3895b555fada1d73 365 Gene3D G3DSA:3.40.50.2000 1 179 1.0E-14 T 23-10-2018 DLM_4453 8e8391cb937b1f7b3895b555fada1d73 365 Gene3D G3DSA:3.40.50.2000 180 350 4.8E-29 T 23-10-2018 DLM_4453 8e8391cb937b1f7b3895b555fada1d73 365 SUPERFAMILY SSF53756 16 363 7.18E-52 T 23-10-2018 DLM_4453 8e8391cb937b1f7b3895b555fada1d73 365 Pfam PF13579 Glycosyl transferase 4-like domain 23 165 2.0E-17 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 Pfam PF13604 AAA domain 130 362 2.8E-29 T 23-10-2018 DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 56 565 9.8E-149 T 23-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 Gene3D G3DSA:3.40.50.300 85 328 1.3E-63 T 23-10-2018 DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 Gene3D G3DSA:3.40.50.300 443 555 2.4E-18 T 23-10-2018 DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 SUPERFAMILY SSF52540 257 566 1.24E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 SUPERFAMILY SSF52540 36 333 1.35E-33 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 SMART SM00382 140 353 0.0018 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 7 564 45.933 T 23-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 Pfam PF13538 UvrD-like helicase C-terminal domain 495 537 2.5E-12 T 23-10-2018 IPR027785 UvrD-like helicase C-terminal domain DLM_3425 107e7f0a9980a16b257a28b58a4ebacd 571 Gene3D G3DSA:3.40.50.300 338 441 5.3E-8 T 23-10-2018 DLM_3331 0e2ccfa7710f9e04dd2bcf29ebf49f62 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DLM_3331 0e2ccfa7710f9e04dd2bcf29ebf49f62 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.144 T 23-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DLM_3331 0e2ccfa7710f9e04dd2bcf29ebf49f62 130 SUPERFAMILY SSF54211 4 130 1.97E-45 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_3331 0e2ccfa7710f9e04dd2bcf29ebf49f62 130 Gene3D G3DSA:3.30.230.10 1 130 8.8E-51 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_3331 0e2ccfa7710f9e04dd2bcf29ebf49f62 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.2E-44 T 23-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DLM_0830 ad926eb9b3af37e298337ae3eae5e3bc 228 SUPERFAMILY SSF161098 18 215 1.09E-41 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0830 ad926eb9b3af37e298337ae3eae5e3bc 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 228 6.5E-20 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0830 ad926eb9b3af37e298337ae3eae5e3bc 228 Gene3D G3DSA:1.10.3720.10 16 228 2.3E-47 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 SUPERFAMILY SSF51246 326 395 2.98E-17 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 Gene3D G3DSA:3.40.50.20 1 122 3.8E-49 T 23-10-2018 DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 SUPERFAMILY SSF56059 114 319 2.12E-56 T 23-10-2018 DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 Gene3D G3DSA:3.30.470.20 198 398 3.6E-63 T 23-10-2018 DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 Gene3D G3DSA:3.30.1490.20 123 197 3.8E-31 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 7 397 51.48 T 23-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 SUPERFAMILY SSF52440 3 112 2.01E-29 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 Pfam PF02222 ATP-grasp domain 123 300 8.1E-53 T 23-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DLM_3325 3cc119faef1ddf74d1eb5b50e000514d 399 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 394 4.5E-175 T 23-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 DLM_1005 6380e1665eafc83c9c281b5e3e88734b 405 Gene3D G3DSA:1.20.1250.20 219 397 1.4E-13 T 23-10-2018 DLM_1005 6380e1665eafc83c9c281b5e3e88734b 405 Gene3D G3DSA:1.20.1250.20 15 218 3.4E-13 T 23-10-2018 DLM_1005 6380e1665eafc83c9c281b5e3e88734b 405 Pfam PF07690 Major Facilitator Superfamily 31 359 1.1E-18 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1005 6380e1665eafc83c9c281b5e3e88734b 405 SUPERFAMILY SSF103473 14 395 1.83E-33 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1210 ce76e12abcaf5983b509151350adeb0a 277 SUPERFAMILY SSF51735 2 266 6.58E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1210 ce76e12abcaf5983b509151350adeb0a 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 158 264 9.6E-21 T 23-10-2018 DLM_1210 ce76e12abcaf5983b509151350adeb0a 277 Pfam PF00106 short chain dehydrogenase 5 133 5.3E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1210 ce76e12abcaf5983b509151350adeb0a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.7E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1210 ce76e12abcaf5983b509151350adeb0a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.7E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1210 ce76e12abcaf5983b509151350adeb0a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 1.7E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1210 ce76e12abcaf5983b509151350adeb0a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 1.7E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1210 ce76e12abcaf5983b509151350adeb0a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.7E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3685 1d9e9ffc6a325aff9ed79dcb02ba835f 350 Gene3D G3DSA:3.30.200.20 2 88 6.4E-15 T 23-10-2018 DLM_3685 1d9e9ffc6a325aff9ed79dcb02ba835f 350 SUPERFAMILY SSF56112 6 258 3.91E-54 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_3685 1d9e9ffc6a325aff9ed79dcb02ba835f 350 Gene3D G3DSA:1.10.510.10 89 271 1.2E-39 T 23-10-2018 DLM_3685 1d9e9ffc6a325aff9ed79dcb02ba835f 350 SMART SM00220 7 257 1.4E-31 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DLM_3685 1d9e9ffc6a325aff9ed79dcb02ba835f 350 Pfam PF00069 Protein kinase domain 8 248 7.3E-37 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 Pfam PF00005 ABC transporter 365 514 1.1E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 Gene3D G3DSA:3.40.50.300 341 588 1.9E-93 T 23-10-2018 DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 13 585 7.4E-258 T 23-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 SMART SM00382 374 560 1.5E-19 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 SUPERFAMILY SSF52540 339 585 2.3E-92 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 SUPERFAMILY SSF90123 20 335 1.31E-70 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 Pfam PF00664 ABC transporter transmembrane region 33 299 1.1E-48 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DLM_4069 9a80609741f128e6d3794e08e5950ce8 592 Gene3D G3DSA:1.20.1560.10 14 335 1.2E-75 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_0511 e329a4b2fa766ce5706a6857a7d4fb37 400 Gene3D G3DSA:2.40.30.170 62 314 3.5E-91 T 23-10-2018 DLM_0511 e329a4b2fa766ce5706a6857a7d4fb37 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 77 304 3.0E-12 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_0511 e329a4b2fa766ce5706a6857a7d4fb37 400 SUPERFAMILY SSF111369 64 309 8.89E-60 T 23-10-2018 DLM_0511 e329a4b2fa766ce5706a6857a7d4fb37 400 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 384 6.7E-82 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_0511 e329a4b2fa766ce5706a6857a7d4fb37 400 Gene3D G3DSA:2.40.420.20 315 383 3.5E-91 T 23-10-2018 DLM_0511 e329a4b2fa766ce5706a6857a7d4fb37 400 Gene3D G3DSA:2.40.50.100 75 220 3.5E-91 T 23-10-2018 DLM_0511 e329a4b2fa766ce5706a6857a7d4fb37 400 Gene3D G3DSA:1.10.287.470 110 183 3.5E-91 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Gene3D G3DSA:3.30.2090.10 178 268 6.0E-285 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 SUPERFAMILY SSF82714 184 265 1.7E-15 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Gene3D G3DSA:3.30.70.1440 648 840 6.0E-285 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Gene3D G3DSA:3.30.70.1430 555 647 6.0E-285 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 SUPERFAMILY SSF82866 290 490 7.85E-50 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 SUPERFAMILY SSF82693 139 323 6.8E-19 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.7E-80 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Pfam PF00873 AcrB/AcrD/AcrF family 4 1000 4.0E-263 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Gene3D G3DSA:1.20.1640.10 10 500 6.0E-285 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Gene3D G3DSA:1.20.1640.10 501 997 6.0E-285 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 SUPERFAMILY SSF82693 43 131 9.68E-22 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Gene3D G3DSA:3.30.2090.10 697 785 6.0E-285 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 SUPERFAMILY SSF82693 650 831 5.75E-15 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 SUPERFAMILY SSF82714 698 782 2.88E-19 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Gene3D G3DSA:3.30.70.1320 134 325 6.0E-285 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 SUPERFAMILY SSF82693 553 650 5.23E-20 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 Gene3D G3DSA:3.30.70.1430 40 793 6.0E-285 T 23-10-2018 DLM_0546 211c3dfe8677c3a8348eef7f050f38f0 1018 SUPERFAMILY SSF82866 802 1000 2.09E-40 T 23-10-2018 DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 Pfam PF00107 Zinc-binding dehydrogenase 202 329 1.0E-24 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 SUPERFAMILY SSF51735 165 339 2.56E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 SUPERFAMILY SSF50129 4 193 1.49E-77 T 23-10-2018 IPR011032 GroES-like superfamily DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 159 1.7E-25 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 SUPERFAMILY SSF50129 324 374 5.18E-12 T 23-10-2018 IPR011032 GroES-like superfamily DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 Gene3D G3DSA:3.40.50.720 179 317 9.1E-158 T 23-10-2018 DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 SMART SM00829 17 372 0.0011 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 Gene3D G3DSA:3.90.180.10 11 369 9.1E-158 T 23-10-2018 DLM_4062 ce2bf906749e92bee8026116284d9dc5 377 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 7 374 5.2E-225 T 23-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 201 220 5.1E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 226 235 5.1E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 293 301 5.1E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 125 135 5.1E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 148 5.1E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 Gene3D G3DSA:3.40.50.80 193 328 5.2E-34 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 31 39 - T 23-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 293 301 1.5E-23 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 201 220 1.5E-23 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 194 1.5E-23 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 137 1.5E-23 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 148 1.5E-23 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 226 235 1.5E-23 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 Gene3D G3DSA:3.10.20.30 2 89 1.4E-25 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 3 75 5.0E-15 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 Gene3D G3DSA:2.40.30.10 95 192 5.3E-26 T 23-10-2018 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 Pfam PF00175 Oxidoreductase NAD-binding domain 202 307 8.4E-22 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 Pfam PF00970 Oxidoreductase FAD-binding domain 108 190 1.0E-15 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 SUPERFAMILY SSF63380 98 192 6.45E-22 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 SUPERFAMILY SSF52343 193 327 6.02E-39 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_0115 e04d70101a16b71a32aa35148ae6edc1 338 SUPERFAMILY SSF54292 2 83 8.39E-26 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_3845 bdc50b322bf717f5896e7725e868120a 491 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 4 482 49.273 T 23-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 DLM_3845 bdc50b322bf717f5896e7725e868120a 491 Gene3D G3DSA:3.40.50.300 215 385 4.4E-49 T 23-10-2018 DLM_3845 bdc50b322bf717f5896e7725e868120a 491 Pfam PF00271 Helicase conserved C-terminal domain 233 341 6.3E-27 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_3845 bdc50b322bf717f5896e7725e868120a 491 Pfam PF00270 DEAD/DEAH box helicase 28 198 7.7E-51 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_3845 bdc50b322bf717f5896e7725e868120a 491 SMART SM00487 23 224 4.3E-62 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_3845 bdc50b322bf717f5896e7725e868120a 491 Gene3D G3DSA:3.40.50.300 2 212 1.0E-76 T 23-10-2018 DLM_3845 bdc50b322bf717f5896e7725e868120a 491 SMART SM00490 260 341 8.5E-32 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_3845 bdc50b322bf717f5896e7725e868120a 491 SUPERFAMILY SSF52540 76 362 1.5E-75 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3845 bdc50b322bf717f5896e7725e868120a 491 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DLM_3833 551b4f0a8a143f40c69038e275266352 721 Gene3D G3DSA:2.170.130.10 55 181 1.7E-42 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DLM_3833 551b4f0a8a143f40c69038e275266352 721 Pfam PF00593 TonB dependent receptor 253 719 6.1E-49 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DLM_3833 551b4f0a8a143f40c69038e275266352 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 74 720 6.5E-90 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DLM_3833 551b4f0a8a143f40c69038e275266352 721 SUPERFAMILY SSF56935 36 721 3.52E-126 T 23-10-2018 DLM_3833 551b4f0a8a143f40c69038e275266352 721 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 23-10-2018 IPR010916 TonB box, conserved site DLM_3833 551b4f0a8a143f40c69038e275266352 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 170 5.8E-22 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_3833 551b4f0a8a143f40c69038e275266352 721 Gene3D G3DSA:2.40.170.20 185 721 4.5E-120 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_4423 370dbb93c851493a1bf6daf5ea806850 168 Gene3D G3DSA:3.40.390.30 14 167 5.8E-48 T 23-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 DLM_4423 370dbb93c851493a1bf6daf5ea806850 168 Pfam PF02130 Uncharacterized protein family UPF0054 31 157 1.4E-35 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DLM_4423 370dbb93c851493a1bf6daf5ea806850 168 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 16 161 22.524 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DLM_4423 370dbb93c851493a1bf6daf5ea806850 168 SUPERFAMILY SSF55486 28 163 1.45E-44 T 23-10-2018 DLM_4423 370dbb93c851493a1bf6daf5ea806850 168 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 127 137 - T 23-10-2018 IPR020549 Endoribonuclease YbeY, conserved site DLM_4423 370dbb93c851493a1bf6daf5ea806850 168 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 52 158 1.0E-34 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DLM_4346 04c2b6729b082e95fec1ed50bb441b26 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 328 37.238 T 23-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 DLM_4346 04c2b6729b082e95fec1ed50bb441b26 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 321 6.0E-114 T 23-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DLM_4346 04c2b6729b082e95fec1ed50bb441b26 329 Gene3D G3DSA:3.40.718.10 3 328 2.8E-125 T 23-10-2018 DLM_4346 04c2b6729b082e95fec1ed50bb441b26 329 SUPERFAMILY SSF53659 6 326 5.58E-112 T 23-10-2018 DLM_4346 04c2b6729b082e95fec1ed50bb441b26 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 325 4.7E-131 T 23-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DLM_2810 a170e8ca75dbdffce64ef533a1d324eb 222 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 213 6.6E-72 T 23-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DLM_2810 a170e8ca75dbdffce64ef533a1d324eb 222 Hamap MF_00238 Cytidylate kinase [cmk]. 4 218 32.591 T 23-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DLM_2810 a170e8ca75dbdffce64ef533a1d324eb 222 SUPERFAMILY SSF52540 4 217 6.33E-41 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2810 a170e8ca75dbdffce64ef533a1d324eb 222 Gene3D G3DSA:3.40.50.300 1 219 1.7E-76 T 23-10-2018 DLM_2810 a170e8ca75dbdffce64ef533a1d324eb 222 Pfam PF02224 Cytidylate kinase 6 214 8.7E-72 T 23-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DLM_3309 d0e17df6e639e648cd0802d6ee77b4c7 160 SUPERFAMILY SSF50346 91 157 1.0E-20 T 23-10-2018 IPR011033 PRC-barrel-like superfamily DLM_3309 d0e17df6e639e648cd0802d6ee77b4c7 160 Gene3D G3DSA:2.40.30.60 1 85 3.5E-27 T 23-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 DLM_3309 d0e17df6e639e648cd0802d6ee77b4c7 160 Pfam PF01782 RimM N-terminal domain 1 82 2.7E-23 T 23-10-2018 IPR002676 RimM, N-terminal GO:0006364 DLM_3309 d0e17df6e639e648cd0802d6ee77b4c7 160 Gene3D G3DSA:2.30.30.240 91 160 1.0E-27 T 23-10-2018 DLM_3309 d0e17df6e639e648cd0802d6ee77b4c7 160 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 1 160 21.617 T 23-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DLM_3309 d0e17df6e639e648cd0802d6ee77b4c7 160 SUPERFAMILY SSF50447 1 85 8.47E-22 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_3309 d0e17df6e639e648cd0802d6ee77b4c7 160 Pfam PF05239 PRC-barrel domain 89 151 4.2E-10 T 23-10-2018 IPR027275 PRC-barrel domain DLM_3309 d0e17df6e639e648cd0802d6ee77b4c7 160 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 1 157 1.3E-50 T 23-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 Pfam PF00672 HAMP domain 386 434 1.5E-10 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 537 691 2.4E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 Gene3D G3DSA:3.30.450.20 73 344 2.8E-60 T 23-10-2018 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 Gene3D G3DSA:1.20.1480.50 350 436 5.7E-12 T 23-10-2018 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 SMART SM00304 385 437 4.8E-13 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 Pfam PF02743 Cache domain 60 336 1.1E-20 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 Gene3D G3DSA:1.10.287.950 437 726 1.8E-69 T 23-10-2018 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 Gene3D G3DSA:3.30.450.20 83 240 2.8E-60 T 23-10-2018 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 SUPERFAMILY SSF58104 407 725 7.32E-60 T 23-10-2018 DLM_1476 c696076b9cabcfa7f08b038de561d0db 727 SMART SM00283 477 724 3.1E-59 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3373 dce5bd937ff2a9c9a7a2825c8b005cf7 297 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 293 8.1E-98 T 23-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DLM_3373 dce5bd937ff2a9c9a7a2825c8b005cf7 297 Pfam PF04321 RmlD substrate binding domain 3 294 1.6E-102 T 23-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DLM_3373 dce5bd937ff2a9c9a7a2825c8b005cf7 297 SUPERFAMILY SSF51735 1 294 1.0E-95 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3373 dce5bd937ff2a9c9a7a2825c8b005cf7 297 Gene3D G3DSA:3.40.50.720 4 281 1.5E-108 T 23-10-2018 DLM_3373 dce5bd937ff2a9c9a7a2825c8b005cf7 297 Gene3D G3DSA:3.90.25.10 159 288 1.5E-108 T 23-10-2018 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 Gene3D G3DSA:3.40.50.720 161 446 1.8E-80 T 23-10-2018 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 SMART SM01274 18 151 9.7E-76 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 755 5.3E-93 T 23-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 PIRSF PIRSF036684 1 763 0.0 T 23-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 SMART SM00919 163 400 1.3E-133 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 SUPERFAMILY SSF51735 163 440 3.07E-83 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 4.6E-26 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 Gene3D G3DSA:3.40.50.10380 1 160 2.8E-66 T 23-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 Gene3D G3DSA:3.40.50.10950 448 755 4.0E-95 T 23-10-2018 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.5E-19 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 SUPERFAMILY SSF53223 10 161 5.04E-50 T 23-10-2018 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 SUPERFAMILY SSF53659 429 759 1.56E-85 T 23-10-2018 DLM_2071 6e09810f8e71bb3319cb9de42ab4f1f2 765 Gene3D G3DSA:3.40.50.10750 577 731 4.0E-95 T 23-10-2018 DLM_4351 b476db02bc08ef964992db8a9437521d 176 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 23-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 DLM_4351 b476db02bc08ef964992db8a9437521d 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 6 19 9.0E-32 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DLM_4351 b476db02bc08ef964992db8a9437521d 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 9.0E-32 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DLM_4351 b476db02bc08ef964992db8a9437521d 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 9.0E-32 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DLM_4351 b476db02bc08ef964992db8a9437521d 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 9.0E-32 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DLM_4351 b476db02bc08ef964992db8a9437521d 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 9.0E-32 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DLM_4351 b476db02bc08ef964992db8a9437521d 176 SUPERFAMILY SSF53098 4 156 5.88E-51 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_4351 b476db02bc08ef964992db8a9437521d 176 Gene3D G3DSA:3.30.420.10 5 159 2.1E-45 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_4351 b476db02bc08ef964992db8a9437521d 176 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 5 155 2.6E-54 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DLM_4351 b476db02bc08ef964992db8a9437521d 176 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 3 155 45.258 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DLM_4351 b476db02bc08ef964992db8a9437521d 176 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 5 152 2.1E-52 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DLM_1389 f7df73eb1b8795f1fcd686194d239b69 234 SMART SM00382 28 212 4.1E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1389 f7df73eb1b8795f1fcd686194d239b69 234 Gene3D G3DSA:3.40.50.300 1 234 1.7E-64 T 23-10-2018 DLM_1389 f7df73eb1b8795f1fcd686194d239b69 234 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1389 f7df73eb1b8795f1fcd686194d239b69 234 Pfam PF00005 ABC transporter 19 161 3.6E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1389 f7df73eb1b8795f1fcd686194d239b69 234 SUPERFAMILY SSF52540 3 231 5.83E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3334 3c0e3b83f578344a3db6b94e50ac3566 404 Hamap MF_00740 Phosphopentomutase [deoB]. 1 403 52.486 T 23-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DLM_3334 3c0e3b83f578344a3db6b94e50ac3566 404 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 401 2.5E-158 T 23-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DLM_3334 3c0e3b83f578344a3db6b94e50ac3566 404 Gene3D G3DSA:3.30.70.1250 114 235 2.1E-147 T 23-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DLM_3334 3c0e3b83f578344a3db6b94e50ac3566 404 Pfam PF01676 Metalloenzyme superfamily 2 394 6.8E-39 T 23-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DLM_3334 3c0e3b83f578344a3db6b94e50ac3566 404 SUPERFAMILY SSF143856 116 232 2.88E-47 T 23-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DLM_3334 3c0e3b83f578344a3db6b94e50ac3566 404 PIRSF PIRSF001491 1 404 3.6E-156 T 23-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DLM_3334 3c0e3b83f578344a3db6b94e50ac3566 404 SUPERFAMILY SSF53649 1 404 1.96E-68 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DLM_3334 3c0e3b83f578344a3db6b94e50ac3566 404 Gene3D G3DSA:3.40.720.10 3 403 2.1E-147 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DLM_2970 87012e63c11d6eac14a73beb3ec0442f 466 Pfam PF00324 Amino acid permease 16 447 8.0E-110 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DLM_2970 87012e63c11d6eac14a73beb3ec0442f 466 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DLM_2970 87012e63c11d6eac14a73beb3ec0442f 466 PIRSF PIRSF006060 1 458 1.1E-69 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_2970 87012e63c11d6eac14a73beb3ec0442f 466 Gene3D G3DSA:1.20.1740.10 9 452 1.3E-63 T 23-10-2018 DLM_2970 87012e63c11d6eac14a73beb3ec0442f 466 TIGRFAM TIGR01773 GABAperm: GABA permease 2 448 2.9E-211 T 23-10-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 DLM_3605 b98da6e1f2944799bdfbc0420795eb41 242 Gene3D G3DSA:3.40.50.450 25 224 2.3E-64 T 23-10-2018 DLM_3605 b98da6e1f2944799bdfbc0420795eb41 242 Pfam PF03641 Possible lysine decarboxylase 90 219 5.2E-33 T 23-10-2018 IPR031100 LOG family DLM_3605 b98da6e1f2944799bdfbc0420795eb41 242 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 48 220 1.3E-46 T 23-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DLM_3605 b98da6e1f2944799bdfbc0420795eb41 242 SUPERFAMILY SSF102405 19 221 4.27E-61 T 23-10-2018 DLM_2596 9165cef7c7bc0de157b93b0f661f975e 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 240 1.5E-9 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2596 9165cef7c7bc0de157b93b0f661f975e 246 Gene3D G3DSA:3.40.190.10 117 217 2.3E-13 T 23-10-2018 DLM_2596 9165cef7c7bc0de157b93b0f661f975e 246 SUPERFAMILY SSF53850 24 244 2.28E-19 T 23-10-2018 DLM_2596 9165cef7c7bc0de157b93b0f661f975e 246 Gene3D G3DSA:3.40.190.10 45 241 2.3E-13 T 23-10-2018 DLM_3434 84b1468031b925540f53232a450aae9b 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.5E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3434 84b1468031b925540f53232a450aae9b 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.5E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3434 84b1468031b925540f53232a450aae9b 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.5E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3434 84b1468031b925540f53232a450aae9b 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.1E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3434 84b1468031b925540f53232a450aae9b 321 SUPERFAMILY SSF53850 88 297 1.28E-47 T 23-10-2018 DLM_3434 84b1468031b925540f53232a450aae9b 321 Pfam PF03466 LysR substrate binding domain 88 294 6.9E-44 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3434 84b1468031b925540f53232a450aae9b 321 Gene3D G3DSA:3.40.190.290 91 294 4.7E-63 T 23-10-2018 DLM_3434 84b1468031b925540f53232a450aae9b 321 SUPERFAMILY SSF46785 3 112 1.97E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3434 84b1468031b925540f53232a450aae9b 321 Gene3D G3DSA:1.10.10.10 3 90 7.5E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0909 e4d21e96d3a42d82299606321afe6d8a 338 Gene3D G3DSA:1.10.10.60 236 336 3.2E-18 T 23-10-2018 DLM_0909 e4d21e96d3a42d82299606321afe6d8a 338 SMART SM00342 249 331 3.8E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0909 e4d21e96d3a42d82299606321afe6d8a 338 Pfam PF12833 Helix-turn-helix domain 255 332 2.5E-14 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0909 e4d21e96d3a42d82299606321afe6d8a 338 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 24 207 4.0E-34 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DLM_0909 e4d21e96d3a42d82299606321afe6d8a 338 SUPERFAMILY SSF46689 284 333 9.41E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1629 5b8452d5af6348148998623cc639bebb 504 Gene3D G3DSA:2.40.160.50 124 504 9.0E-96 T 23-10-2018 DLM_1629 5b8452d5af6348148998623cc639bebb 504 Pfam PF17287 POTRA domain 92 146 9.6E-21 T 23-10-2018 IPR035251 ShlB, POTRA domain DLM_1629 5b8452d5af6348148998623cc639bebb 504 PIRSF PIRSF029745 3 504 1.2E-139 T 23-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 DLM_1629 5b8452d5af6348148998623cc639bebb 504 Gene3D G3DSA:3.10.20.310 5 91 1.5E-6 T 23-10-2018 DLM_1629 5b8452d5af6348148998623cc639bebb 504 Pfam PF08479 POTRA domain, ShlB-type 12 91 2.3E-17 T 23-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type DLM_1629 5b8452d5af6348148998623cc639bebb 504 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 156 468 7.7E-101 T 23-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal DLM_1202 85f4400460478f83f02a433a6bf647bd 295 Gene3D G3DSA:3.40.190.10 94 293 2.3E-50 T 23-10-2018 DLM_1202 85f4400460478f83f02a433a6bf647bd 295 SUPERFAMILY SSF53850 92 295 1.14E-39 T 23-10-2018 DLM_1202 85f4400460478f83f02a433a6bf647bd 295 SUPERFAMILY SSF46785 5 113 5.89E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1202 85f4400460478f83f02a433a6bf647bd 295 Gene3D G3DSA:1.10.10.10 4 91 1.4E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1202 85f4400460478f83f02a433a6bf647bd 295 Pfam PF03466 LysR substrate binding domain 90 294 1.2E-34 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1202 85f4400460478f83f02a433a6bf647bd 295 Gene3D G3DSA:3.40.190.10 166 269 2.3E-50 T 23-10-2018 DLM_1202 85f4400460478f83f02a433a6bf647bd 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 7.2E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1202 85f4400460478f83f02a433a6bf647bd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1202 85f4400460478f83f02a433a6bf647bd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1202 85f4400460478f83f02a433a6bf647bd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 Pfam PF08448 PAS fold 11 105 1.1E-6 T 23-10-2018 IPR013656 PAS fold-4 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 SMART SM00387 234 349 2.0E-32 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3083 bad5d94e56e14a888953df8969e78d08 351 Gene3D G3DSA:3.30.565.10 192 348 1.8E-43 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3083 bad5d94e56e14a888953df8969e78d08 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 348 7.8E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3083 bad5d94e56e14a888953df8969e78d08 351 SUPERFAMILY SSF55874 198 346 1.7E-38 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3083 bad5d94e56e14a888953df8969e78d08 351 SUPERFAMILY SSF47384 121 191 4.32E-14 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 SMART SM00388 129 195 1.3E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 SUPERFAMILY SSF55785 9 102 2.09E-9 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3083 bad5d94e56e14a888953df8969e78d08 351 Gene3D G3DSA:1.10.287.130 133 191 2.2E-15 T 23-10-2018 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 Gene3D G3DSA:3.30.450.20 6 112 6.5E-14 T 23-10-2018 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 6.2E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 6.2E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 6.2E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3083 bad5d94e56e14a888953df8969e78d08 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 130 191 3.1E-15 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2943 0ae338595189a5763aa6e5e5281c70d4 340 Hamap MF_01962 Adenine deaminase. 8 320 83.332 T 23-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DLM_2943 0ae338595189a5763aa6e5e5281c70d4 340 SUPERFAMILY SSF51556 7 332 6.81E-84 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_2943 0ae338595189a5763aa6e5e5281c70d4 340 Pfam PF00962 Adenosine/AMP deaminase 12 328 1.1E-68 T 23-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 DLM_2943 0ae338595189a5763aa6e5e5281c70d4 340 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 12 328 3.3E-111 T 23-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 DLM_2943 0ae338595189a5763aa6e5e5281c70d4 340 Gene3D G3DSA:3.20.20.140 2 337 8.5E-100 T 23-10-2018 DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 Pfam PF13426 PAS domain 139 243 1.4E-10 T 23-10-2018 IPR000014 PAS domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 122 5.2E-6 T 23-10-2018 IPR000014 PAS domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 125 251 9.6E-19 T 23-10-2018 IPR000014 PAS domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SUPERFAMILY SSF55785 113 242 3.84E-21 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 Gene3D G3DSA:3.30.450.20 127 253 2.9E-23 T 23-10-2018 DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SMART SM00267 244 416 6.2E-64 T 23-10-2018 IPR000160 GGDEF domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 414 5.9E-46 T 23-10-2018 IPR000160 GGDEF domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SMART SM00052 426 671 1.5E-101 T 23-10-2018 IPR001633 EAL domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SUPERFAMILY SSF55073 260 417 1.18E-50 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 Gene3D G3DSA:3.30.70.270 254 428 1.2E-58 T 23-10-2018 DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 411 2.8E-48 T 23-10-2018 IPR000160 GGDEF domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SMART SM00091 1 70 260.0 T 23-10-2018 IPR000014 PAS domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SMART SM00091 128 199 0.003 T 23-10-2018 IPR000014 PAS domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 Pfam PF08447 PAS fold 26 104 4.6E-13 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SMART SM00086 202 244 5.3E-5 T 23-10-2018 IPR001610 PAC motif DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SMART SM00086 76 116 3.3 T 23-10-2018 IPR001610 PAC motif DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 Pfam PF00563 EAL domain 432 665 3.6E-70 T 23-10-2018 IPR001633 EAL domain DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 Gene3D G3DSA:3.30.450.20 1 114 3.4E-18 T 23-10-2018 DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SUPERFAMILY SSF55785 19 124 6.11E-13 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 SUPERFAMILY SSF141868 431 675 1.44E-81 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0942 c2ea9c2c88fdb074488a65c8b695ba37 677 Gene3D G3DSA:3.20.20.450 429 677 1.7E-89 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2209 1d6b5fd0e88c95a68b26516af43e8f10 167 Pfam PF00174 Oxidoreductase molybdopterin binding domain 64 139 1.1E-6 T 23-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DLM_2209 1d6b5fd0e88c95a68b26516af43e8f10 167 SUPERFAMILY SSF56524 48 166 4.58E-16 T 23-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DLM_2209 1d6b5fd0e88c95a68b26516af43e8f10 167 Gene3D G3DSA:3.90.420.10 31 141 2.2E-5 T 23-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DLM_2833 3314556bce36eb345878b4c52f215015 331 Pfam PF06996 Type VI secretion, TssG 15 311 2.7E-59 T 23-10-2018 IPR010732 Type VI secretion, TssG-like DLM_2833 3314556bce36eb345878b4c52f215015 331 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 15 311 8.5E-58 T 23-10-2018 IPR010732 Type VI secretion, TssG-like DLM_1432 dc31d894742b4e0d3a4182efbacb65af 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 483 3.7E-46 T 23-10-2018 IPR000160 GGDEF domain DLM_1432 dc31d894742b4e0d3a4182efbacb65af 488 Gene3D G3DSA:3.30.70.270 312 487 2.0E-54 T 23-10-2018 DLM_1432 dc31d894742b4e0d3a4182efbacb65af 488 SUPERFAMILY SSF55073 331 486 1.33E-48 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_1432 dc31d894742b4e0d3a4182efbacb65af 488 SMART SM00267 315 487 2.2E-61 T 23-10-2018 IPR000160 GGDEF domain DLM_1432 dc31d894742b4e0d3a4182efbacb65af 488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 487 1.8E-51 T 23-10-2018 IPR000160 GGDEF domain DLM_2858 c461a42c666cabcd90389084b1cc1310 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 306 6.0E-28 T 23-10-2018 IPR020801 Polyketide synthase, acyl transferase domain DLM_2858 c461a42c666cabcd90389084b1cc1310 309 SUPERFAMILY SSF52151 3 305 3.4E-72 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DLM_2858 c461a42c666cabcd90389084b1cc1310 309 Gene3D G3DSA:3.40.366.10 5 284 8.1E-93 T 23-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 DLM_2858 c461a42c666cabcd90389084b1cc1310 309 PIRSF PIRSF000446 1 309 4.1E-114 T 23-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DLM_2858 c461a42c666cabcd90389084b1cc1310 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 288 2.8E-108 T 23-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DLM_2858 c461a42c666cabcd90389084b1cc1310 309 Pfam PF00698 Acyl transferase domain 5 273 2.2E-32 T 23-10-2018 IPR014043 Acyl transferase DLM_2858 c461a42c666cabcd90389084b1cc1310 309 SUPERFAMILY SSF55048 126 195 4.58E-19 T 23-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DLM_2858 c461a42c666cabcd90389084b1cc1310 309 Gene3D G3DSA:3.30.70.250 123 195 8.1E-93 T 23-10-2018 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 PIRSF PIRSF000110 1 492 8.4E-171 T 23-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 Gene3D G3DSA:3.30.360.10 177 490 8.5E-125 T 23-10-2018 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 10 490 79.466 T 23-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 188 7.0E-54 T 23-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 SUPERFAMILY SSF55347 178 489 2.22E-116 T 23-10-2018 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 11 490 9.6E-176 T 23-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 23-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 3.4E-46 T 23-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 3.4E-46 T 23-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 3.4E-46 T 23-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 3.4E-46 T 23-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 3.4E-46 T 23-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 190 489 6.4E-117 T 23-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 SUPERFAMILY SSF51735 6 191 3.35E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4146 0a62de378a46c52a1e83ffbef4383eb9 492 Gene3D G3DSA:3.40.50.720 9 176 9.0E-40 T 23-10-2018 DLM_4172 ecd3aa83fdd48e9317d7f55353bbaa94 157 Pfam PF04314 Copper chaperone PCu(A)C 33 140 8.8E-43 T 23-10-2018 IPR007410 Copper chaperone PCuAC DLM_4172 ecd3aa83fdd48e9317d7f55353bbaa94 157 Gene3D G3DSA:2.60.40.1890 35 149 1.4E-42 T 23-10-2018 IPR036182 Copper chaperone PCuAC superfamily DLM_4172 ecd3aa83fdd48e9317d7f55353bbaa94 157 SUPERFAMILY SSF110087 7 148 1.05E-49 T 23-10-2018 IPR036182 Copper chaperone PCuAC superfamily DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 SUPERFAMILY SSF55979 128 246 6.07E-30 T 23-10-2018 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 PIRSF PIRSF000804 2 368 1.4E-111 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 248 367 3.3E-32 T 23-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 Gene3D G3DSA:3.10.150.10 250 368 8.8E-36 T 23-10-2018 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 SMART SM00480 18 364 5.9E-116 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 SUPERFAMILY SSF55979 5 118 1.85E-22 T 23-10-2018 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 5 120 5.2E-28 T 23-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 SUPERFAMILY SSF55979 248 368 1.36E-35 T 23-10-2018 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 Gene3D G3DSA:3.10.150.10 2 123 3.8E-34 T 23-10-2018 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 245 1.9E-34 T 23-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 Gene3D G3DSA:3.10.150.10 126 249 8.2E-38 T 23-10-2018 DLM_4102 6a4ec4ede4232f9a35d9ebe804368753 368 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 4 367 1.1E-92 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 Gene3D G3DSA:2.40.110.10 125 223 3.3E-28 T 23-10-2018 DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 243 376 1.4E-19 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 PIRSF PIRSF016578 3 392 4.4E-29 T 23-10-2018 DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 Gene3D G3DSA:1.20.140.10 224 399 1.6E-55 T 23-10-2018 DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 SUPERFAMILY SSF56645 21 224 8.25E-43 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 121 7.5E-7 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 SUPERFAMILY SSF47203 239 399 8.54E-21 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 216 1.3E-8 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 10 401 4.2E-181 T 23-10-2018 IPR023922 Sulphate-starvation-induced SfnB DLM_1518 aa6831a05e2b15abd525ea0863dbf7ab 401 Gene3D G3DSA:1.10.540.10 17 123 4.1E-21 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_2719 f982752741c02d99bc933b82df49b163 486 Gene3D G3DSA:3.30.870.10 301 482 4.7E-29 T 23-10-2018 DLM_2719 f982752741c02d99bc933b82df49b163 486 Pfam PF13091 PLD-like domain 329 452 7.8E-24 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_2719 f982752741c02d99bc933b82df49b163 486 Pfam PF13091 PLD-like domain 133 279 4.8E-13 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_2719 f982752741c02d99bc933b82df49b163 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 486 1.5E-109 T 23-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DLM_2719 f982752741c02d99bc933b82df49b163 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 20 60 1.7E-10 T 23-10-2018 IPR027379 Cardiolipin synthase N-terminal DLM_2719 f982752741c02d99bc933b82df49b163 486 SUPERFAMILY SSF56024 272 473 6.28E-42 T 23-10-2018 DLM_2719 f982752741c02d99bc933b82df49b163 486 Gene3D G3DSA:3.30.870.10 107 297 1.3E-36 T 23-10-2018 DLM_2719 f982752741c02d99bc933b82df49b163 486 SUPERFAMILY SSF56024 92 315 2.47E-44 T 23-10-2018 DLM_2719 f982752741c02d99bc933b82df49b163 486 SMART SM00155 399 426 3.2E-5 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_2719 f982752741c02d99bc933b82df49b163 486 SMART SM00155 219 246 17.0 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_2719 f982752741c02d99bc933b82df49b163 486 PIRSF PIRSF000850 107 186 25.0 T 23-10-2018 DLM_2719 f982752741c02d99bc933b82df49b163 486 PIRSF PIRSF000850 393 465 3.4E-4 T 23-10-2018 DLM_2719 f982752741c02d99bc933b82df49b163 486 PIRSF PIRSF000850 307 371 1.8 T 23-10-2018 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 SUPERFAMILY SSF55785 357 469 2.27E-22 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3628 97435ad12c663707eabdbea7400b76ac 708 Gene3D G3DSA:3.30.450.20 58 179 1.7E-64 T 23-10-2018 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 347 472 7.2E-24 T 23-10-2018 IPR000014 PAS domain DLM_3628 97435ad12c663707eabdbea7400b76ac 708 PIRSF PIRSF036431 460 708 1.3E-68 T 23-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DLM_3628 97435ad12c663707eabdbea7400b76ac 708 PIRSF PIRSF036431 2 357 2.5E-77 T 23-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DLM_3628 97435ad12c663707eabdbea7400b76ac 708 SUPERFAMILY SSF103190 94 190 2.33E-13 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_3628 97435ad12c663707eabdbea7400b76ac 708 Pfam PF00512 His Kinase A (phospho-acceptor) domain 489 548 6.9E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 SMART SM00388 488 556 2.0E-4 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 Gene3D G3DSA:3.30.450.20 335 495 2.0E-25 T 23-10-2018 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 Gene3D G3DSA:1.10.287.130 496 552 1.5E-12 T 23-10-2018 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 SUPERFAMILY SSF55874 542 706 1.83E-41 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3628 97435ad12c663707eabdbea7400b76ac 708 SMART SM00091 350 417 5.9E-6 T 23-10-2018 IPR000014 PAS domain DLM_3628 97435ad12c663707eabdbea7400b76ac 708 SUPERFAMILY SSF47384 479 551 6.28E-7 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 598 706 3.5E-21 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3628 97435ad12c663707eabdbea7400b76ac 708 Pfam PF00989 PAS fold 351 459 5.7E-10 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 SMART SM00387 598 708 2.7E-34 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3628 97435ad12c663707eabdbea7400b76ac 708 Gene3D G3DSA:3.30.450.20 52 285 1.7E-64 T 23-10-2018 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 Gene3D G3DSA:3.30.565.10 555 708 1.0E-45 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3628 97435ad12c663707eabdbea7400b76ac 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 667 2.4E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 686 2.4E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 705 2.4E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3628 97435ad12c663707eabdbea7400b76ac 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 653 2.4E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3769 0e6bc2359b3ab834c796b64b9bc94ca1 1273 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 940 1272 1.8E-47 T 23-10-2018 IPR007452 Translocation and assembly module TamB DLM_0360 6397f3d311516277807955b5684ecfbb 294 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 23-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DLM_0360 6397f3d311516277807955b5684ecfbb 294 Pfam PF00549 CoA-ligase 151 270 1.1E-19 T 23-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_0360 6397f3d311516277807955b5684ecfbb 294 SUPERFAMILY SSF52210 123 289 9.68E-58 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_0360 6397f3d311516277807955b5684ecfbb 294 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 23-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DLM_0360 6397f3d311516277807955b5684ecfbb 294 Gene3D G3DSA:3.40.50.261 124 289 2.4E-74 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_0360 6397f3d311516277807955b5684ecfbb 294 Gene3D G3DSA:3.40.50.720 1 123 8.5E-52 T 23-10-2018 DLM_0360 6397f3d311516277807955b5684ecfbb 294 SMART SM00881 4 100 4.4E-37 T 23-10-2018 IPR003781 CoA-binding GO:0048037 DLM_0360 6397f3d311516277807955b5684ecfbb 294 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 3.5E-40 T 23-10-2018 DLM_0360 6397f3d311516277807955b5684ecfbb 294 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 3.5E-40 T 23-10-2018 DLM_0360 6397f3d311516277807955b5684ecfbb 294 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 3.5E-40 T 23-10-2018 DLM_0360 6397f3d311516277807955b5684ecfbb 294 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.5E-40 T 23-10-2018 DLM_0360 6397f3d311516277807955b5684ecfbb 294 PIRSF PIRSF001553 1 291 3.4E-133 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_0360 6397f3d311516277807955b5684ecfbb 294 SUPERFAMILY SSF51735 1 122 7.77E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0360 6397f3d311516277807955b5684ecfbb 294 Pfam PF02629 CoA binding domain 6 99 2.5E-31 T 23-10-2018 IPR003781 CoA-binding GO:0048037 DLM_0360 6397f3d311516277807955b5684ecfbb 294 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.006 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_0360 6397f3d311516277807955b5684ecfbb 294 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 1.9E-141 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 Pfam PF00171 Aldehyde dehydrogenase family 5 267 1.0E-26 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 630 658 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 SUPERFAMILY SSF56796 449 863 1.44E-116 T 23-10-2018 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 Gene3D G3DSA:3.40.50.1970 450 641 5.9E-54 T 23-10-2018 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 Gene3D G3DSA:3.40.605.10 10 444 9.9E-181 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 Gene3D G3DSA:1.20.1090.10 642 861 8.2E-65 T 23-10-2018 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 PIRSF PIRSF000111 1 862 0.0 T 23-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 SUPERFAMILY SSF53720 6 453 4.71E-83 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 718 738 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 Gene3D G3DSA:3.40.309.10 218 404 9.9E-181 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_3152 706f3a683bd88e0dd2a1adf895faa112 888 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 846 4.2E-113 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DLM_2036 d33e87bc8e6af6950bd556a018e9e793 263 SUPERFAMILY SSF161098 59 242 1.31E-32 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2036 d33e87bc8e6af6950bd556a018e9e793 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 252 2.7E-23 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_2036 d33e87bc8e6af6950bd556a018e9e793 263 Gene3D G3DSA:1.10.3720.10 50 252 9.9E-24 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4320 0e057dd7b28b93615f979f7965f7c66c 135 Gene3D G3DSA:3.10.129.10 1 134 2.1E-37 T 23-10-2018 DLM_4320 0e057dd7b28b93615f979f7965f7c66c 135 PIRSF PIRSF003230 1 135 4.7E-22 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DLM_4320 0e057dd7b28b93615f979f7965f7c66c 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 121 5.9E-24 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DLM_4320 0e057dd7b28b93615f979f7965f7c66c 135 SUPERFAMILY SSF54637 3 131 3.6E-36 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_4320 0e057dd7b28b93615f979f7965f7c66c 135 Pfam PF13279 Thioesterase-like superfamily 13 121 3.5E-17 T 23-10-2018 DLM_3415 b82db480e2c2d2540625141092b33248 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 23-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 DLM_3415 b82db480e2c2d2540625141092b33248 271 SMART SM00898 2 115 4.9E-52 T 23-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DLM_3415 b82db480e2c2d2540625141092b33248 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.1E-30 T 23-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DLM_3415 b82db480e2c2d2540625141092b33248 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 1.8E-27 T 23-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DLM_3415 b82db480e2c2d2540625141092b33248 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 270 3.1E-7 T 23-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DLM_3415 b82db480e2c2d2540625141092b33248 271 Gene3D G3DSA:3.20.190.10 2 128 4.8E-37 T 23-10-2018 IPR035937 MutM-like, N-terminal DLM_3415 b82db480e2c2d2540625141092b33248 271 Gene3D G3DSA:1.10.8.50 140 269 2.0E-45 T 23-10-2018 DLM_3415 b82db480e2c2d2540625141092b33248 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 8.0E-88 T 23-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DLM_3415 b82db480e2c2d2540625141092b33248 271 SUPERFAMILY SSF81624 2 139 1.57E-38 T 23-10-2018 IPR035937 MutM-like, N-terminal DLM_3415 b82db480e2c2d2540625141092b33248 271 SUPERFAMILY SSF57716 218 270 4.85E-16 T 23-10-2018 DLM_3415 b82db480e2c2d2540625141092b33248 271 SUPERFAMILY SSF46946 131 223 9.68E-30 T 23-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DLM_3415 b82db480e2c2d2540625141092b33248 271 SMART SM01232 130 222 3.9E-48 T 23-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DLM_3415 b82db480e2c2d2540625141092b33248 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 41.883 T 23-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DLM_1749 53f1f33436c03adc60e82faaec3e7bfe 271 Gene3D G3DSA:3.40.720.10 3 268 8.0E-30 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DLM_1749 53f1f33436c03adc60e82faaec3e7bfe 271 SUPERFAMILY SSF53649 1 255 1.55E-45 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DLM_1749 53f1f33436c03adc60e82faaec3e7bfe 271 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 210 8.8E-15 T 23-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 SMART SM00382 59 230 1.3E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2592 883d519118934c0ca2f91f9695b9df86 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 326 4.3E-171 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 ProSitePatterns PS00321 recA signature. 215 223 - T 23-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 PRINTS PR00142 RecA protein signature 129 158 4.9E-84 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 PRINTS PR00142 RecA protein signature 167 196 4.9E-84 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 PRINTS PR00142 RecA protein signature 245 274 4.9E-84 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 PRINTS PR00142 RecA protein signature 95 124 4.9E-84 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 PRINTS PR00142 RecA protein signature 299 316 4.9E-84 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 PRINTS PR00142 RecA protein signature 212 240 4.9E-84 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 SUPERFAMILY SSF52540 6 269 6.38E-68 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2592 883d519118934c0ca2f91f9695b9df86 349 Gene3D G3DSA:3.30.250.10 271 348 4.7E-29 T 23-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DLM_2592 883d519118934c0ca2f91f9695b9df86 349 Hamap MF_00268 Protein RecA [recA]. 6 331 51.596 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 Pfam PF00154 recA bacterial DNA recombination protein 8 270 1.0E-142 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DLM_2592 883d519118934c0ca2f91f9695b9df86 349 SUPERFAMILY SSF54752 270 328 1.26E-21 T 23-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DLM_2592 883d519118934c0ca2f91f9695b9df86 349 Gene3D G3DSA:3.40.50.300 27 270 1.1E-85 T 23-10-2018 DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 Gene3D G3DSA:3.30.1390.10 53 123 1.3E-30 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 25.063 T 23-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 SUPERFAMILY SSF54736 52 123 6.28E-25 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 2.1E-30 T 23-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 123 3.0E-17 T 23-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 9.6E-19 T 23-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.1E-49 T 23-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 SUPERFAMILY SSF48300 3 59 4.32E-18 T 23-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4383 c25d93a8a9f86427063f6b8c9ad32650 123 Gene3D G3DSA:1.20.5.710 2 52 4.4E-22 T 23-10-2018 DLM_2483 6b64d41b4027ab9459e96776d13ea2a2 202 SUPERFAMILY SSF159594 26 192 3.14E-26 T 23-10-2018 DLM_2483 6b64d41b4027ab9459e96776d13ea2a2 202 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 38 186 4.2E-28 T 23-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component DLM_2483 6b64d41b4027ab9459e96776d13ea2a2 202 Gene3D G3DSA:3.40.50.10610 17 196 4.6E-10 T 23-10-2018 DLM_1155 374c284425a82761364a93094a9d00e1 403 Pfam PF01546 Peptidase family M20/M25/M40 77 394 1.1E-33 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 DLM_1155 374c284425a82761364a93094a9d00e1 403 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 23-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DLM_1155 374c284425a82761364a93094a9d00e1 403 Gene3D G3DSA:3.30.70.360 190 306 1.1E-103 T 23-10-2018 DLM_1155 374c284425a82761364a93094a9d00e1 403 Pfam PF07687 Peptidase dimerisation domain 186 297 1.3E-26 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain DLM_1155 374c284425a82761364a93094a9d00e1 403 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 18 392 2.9E-115 T 23-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DLM_1155 374c284425a82761364a93094a9d00e1 403 Gene3D G3DSA:3.40.630.10 22 382 1.1E-103 T 23-10-2018 DLM_1155 374c284425a82761364a93094a9d00e1 403 SUPERFAMILY SSF53187 13 397 5.5E-58 T 23-10-2018 DLM_1155 374c284425a82761364a93094a9d00e1 403 SUPERFAMILY SSF55031 190 299 3.44E-22 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DLM_2874 ec34e82d47ca704666b5c35029bade12 672 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 403 1.1E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_2874 ec34e82d47ca704666b5c35029bade12 672 SMART SM00267 236 408 4.2E-52 T 23-10-2018 IPR000160 GGDEF domain DLM_2874 ec34e82d47ca704666b5c35029bade12 672 Pfam PF00563 EAL domain 425 655 1.2E-70 T 23-10-2018 IPR001633 EAL domain DLM_2874 ec34e82d47ca704666b5c35029bade12 672 SUPERFAMILY SSF55073 252 410 4.47E-43 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2874 ec34e82d47ca704666b5c35029bade12 672 Gene3D G3DSA:3.30.70.270 241 420 2.4E-55 T 23-10-2018 DLM_2874 ec34e82d47ca704666b5c35029bade12 672 Gene3D G3DSA:3.20.20.450 421 669 4.5E-93 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2874 ec34e82d47ca704666b5c35029bade12 672 SMART SM00052 418 660 5.1E-101 T 23-10-2018 IPR001633 EAL domain DLM_2874 ec34e82d47ca704666b5c35029bade12 672 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 406 6.6E-35 T 23-10-2018 IPR000160 GGDEF domain DLM_2874 ec34e82d47ca704666b5c35029bade12 672 SUPERFAMILY SSF141868 425 665 1.31E-82 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2874 ec34e82d47ca704666b5c35029bade12 672 SUPERFAMILY SSF55785 139 239 2.28E-5 T 23-10-2018 IPR035965 PAS domain superfamily DLM_4536 763d6df4dbf3d55ae9b52724bf9264a8 289 Gene3D G3DSA:3.90.550.10 1 288 5.5E-90 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_4536 763d6df4dbf3d55ae9b52724bf9264a8 289 SUPERFAMILY SSF53448 2 269 2.38E-66 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_4536 763d6df4dbf3d55ae9b52724bf9264a8 289 Pfam PF00483 Nucleotidyl transferase 11 266 8.9E-32 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DLM_4536 763d6df4dbf3d55ae9b52724bf9264a8 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 4.6E-117 T 23-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DLM_0280 f31cfdb10272aa7eb313c65f2ee601f3 334 Gene3D G3DSA:3.40.50.300 1 238 1.4E-78 T 23-10-2018 DLM_0280 f31cfdb10272aa7eb313c65f2ee601f3 334 SMART SM00382 28 211 2.8E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0280 f31cfdb10272aa7eb313c65f2ee601f3 334 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0280 f31cfdb10272aa7eb313c65f2ee601f3 334 Pfam PF08402 TOBE domain 257 330 3.3E-10 T 23-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DLM_0280 f31cfdb10272aa7eb313c65f2ee601f3 334 Pfam PF00005 ABC transporter 20 161 2.7E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0280 f31cfdb10272aa7eb313c65f2ee601f3 334 SUPERFAMILY SSF50331 256 330 2.0E-7 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_0280 f31cfdb10272aa7eb313c65f2ee601f3 334 SUPERFAMILY SSF52540 4 240 5.74E-88 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3081 c99fec4765b75c1a87c6420c6fff3a51 140 SMART SM01034 2 94 1.4E-35 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 DLM_3081 c99fec4765b75c1a87c6420c6fff3a51 140 Gene3D G3DSA:3.30.70.3200 1 122 1.2E-36 T 23-10-2018 DLM_3081 c99fec4765b75c1a87c6420c6fff3a51 140 Pfam PF04940 Sensors of blue-light using FAD 2 93 8.8E-30 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 DLM_3081 c99fec4765b75c1a87c6420c6fff3a51 140 SUPERFAMILY SSF54975 1 136 5.89E-35 T 23-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 Gene3D G3DSA:3.30.1360.40 261 377 1.2E-182 T 23-10-2018 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 Gene3D G3DSA:3.90.199.10 56 529 1.2E-182 T 23-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 SUPERFAMILY SSF56719 55 529 1.57E-148 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 56 512 9.7E-128 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 35 775 6.0E-236 T 23-10-2018 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 SMART SM00434 35 507 3.8E-226 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 Gene3D G3DSA:2.120.10.90 542 781 1.7E-21 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 736 1.5E-4 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 681 2.6 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 Gene3D G3DSA:1.10.268.10 415 500 1.2E-182 T 23-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 SUPERFAMILY SSF101904 544 777 1.57E-42 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DLM_4041 ca7e4d40e40a7f18155d74bada3a7be9 791 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 28 784 33.42 T 23-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 SMART SM00478 45 198 8.8E-47 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 SUPERFAMILY SSF48150 10 232 3.61E-69 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 13 283 2.4E-105 T 23-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 Gene3D G3DSA:1.10.1670.10 16 217 3.7E-81 T 23-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 Pfam PF00633 Helix-hairpin-helix motif 106 134 8.7E-7 T 23-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 Gene3D G3DSA:1.10.340.30 28 138 3.7E-81 T 23-10-2018 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 173 1.9E-19 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 Gene3D G3DSA:3.90.79.10 232 353 2.4E-12 T 23-10-2018 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 SUPERFAMILY SSF55811 227 351 5.55E-23 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 Pfam PF14815 NUDIX domain 240 349 6.7E-22 T 23-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DLM_3339 8a624b839bd7f5cfa726f0e52b728322 353 ProSitePatterns PS01155 Endonuclease III family signature. 108 137 - T 23-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 Gene3D G3DSA:3.40.50.720 2 266 3.1E-82 T 23-10-2018 DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 4.4E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.4E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.4E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.4E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 4.4E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 4.4E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 4.7E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 4.7E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 4.7E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 260 1.5E-65 T 23-10-2018 DLM_3588 3108414da3e74937b39e87d2b6d2062f 267 SUPERFAMILY SSF51735 16 262 1.32E-80 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1718 116ad4e0be3329a9c796fa46c332aa32 133 Pfam PF03817 Malonate transporter MadL subunit 1 115 4.0E-49 T 23-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 DLM_1718 116ad4e0be3329a9c796fa46c332aa32 133 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 117 8.7E-51 T 23-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 DLM_2831 fec53c1be05fef4597cd31d02f205023 521 Pfam PF06812 ImpA, N-terminal, type VI secretion system 30 134 2.4E-20 T 23-10-2018 IPR010657 ImpA, N-terminal DLM_2831 fec53c1be05fef4597cd31d02f205023 521 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 214 476 4.7E-69 T 23-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 DLM_2831 fec53c1be05fef4597cd31d02f205023 521 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 27 476 1.0E-87 T 23-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 DLM_3328 a8ff54c2126fa47070a9428fc783a024 116 SUPERFAMILY SSF89360 10 105 4.51E-32 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DLM_3328 a8ff54c2126fa47070a9428fc783a024 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 11 116 9.1E-39 T 23-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DLM_3328 a8ff54c2126fa47070a9428fc783a024 116 Gene3D G3DSA:2.60.300.12 10 116 4.3E-34 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DLM_3328 a8ff54c2126fa47070a9428fc783a024 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 37.302 T 23-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 DLM_3328 a8ff54c2126fa47070a9428fc783a024 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 111 7.0E-20 T 23-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DLM_3328 a8ff54c2126fa47070a9428fc783a024 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 23-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 SUPERFAMILY SSF52172 4 183 2.13E-41 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 SUPERFAMILY SSF46689 386 440 6.72E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 Pfam PF00158 Sigma-54 interaction domain 142 305 9.3E-71 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 Pfam PF00072 Response regulator receiver domain 7 116 8.7E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 Gene3D G3DSA:3.40.50.300 138 309 3.4E-61 T 23-10-2018 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 Gene3D G3DSA:1.10.10.60 387 442 4.6E-10 T 23-10-2018 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 Gene3D G3DSA:1.10.8.60 310 386 6.8E-22 T 23-10-2018 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 SMART SM00448 5 116 1.7E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 Gene3D G3DSA:3.40.50.2300 1 137 1.0E-36 T 23-10-2018 DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 SUPERFAMILY SSF52540 139 382 9.18E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0596 4dafc597a197ac4fe9c84914f6e038d4 448 SMART SM00382 159 307 1.4E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1557 620de70f81a73d9d7e78d3c84365b4b1 420 SUPERFAMILY SSF51905 11 420 4.27E-47 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1557 620de70f81a73d9d7e78d3c84365b4b1 420 Pfam PF01266 FAD dependent oxidoreductase 11 402 2.5E-59 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_1557 620de70f81a73d9d7e78d3c84365b4b1 420 Gene3D G3DSA:3.50.50.60 126 403 5.2E-45 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1557 620de70f81a73d9d7e78d3c84365b4b1 420 SUPERFAMILY SSF54373 277 363 2.88E-8 T 23-10-2018 DLM_1557 620de70f81a73d9d7e78d3c84365b4b1 420 Gene3D G3DSA:3.30.9.10 141 362 5.2E-45 T 23-10-2018 DLM_1557 620de70f81a73d9d7e78d3c84365b4b1 420 Gene3D G3DSA:3.50.50.60 5 71 5.1E-10 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3999 35357ac481363b9d6ae336db10f69f92 482 Gene3D G3DSA:1.20.1720.10 30 243 1.3E-37 T 23-10-2018 DLM_3999 35357ac481363b9d6ae336db10f69f92 482 SUPERFAMILY SSF103473 18 474 8.24E-52 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3999 35357ac481363b9d6ae336db10f69f92 482 Gene3D G3DSA:1.20.1250.20 288 476 8.1E-15 T 23-10-2018 DLM_3999 35357ac481363b9d6ae336db10f69f92 482 Pfam PF07690 Major Facilitator Superfamily 33 432 3.1E-39 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1057 b54b991b7008ce810284ae02f604f47b 394 PIRSF PIRSF001434 1 394 1.5E-136 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_1057 b54b991b7008ce810284ae02f604f47b 394 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 13 393 2.1E-177 T 23-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 DLM_1057 b54b991b7008ce810284ae02f604f47b 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 393 2.4E-144 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_1057 b54b991b7008ce810284ae02f604f47b 394 Gene3D G3DSA:3.90.1150.10 262 394 1.0E-52 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1057 b54b991b7008ce810284ae02f604f47b 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_1057 b54b991b7008ce810284ae02f604f47b 394 Gene3D G3DSA:3.40.640.10 7 259 1.5E-88 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1057 b54b991b7008ce810284ae02f604f47b 394 SUPERFAMILY SSF53383 34 394 7.58E-125 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_1057 b54b991b7008ce810284ae02f604f47b 394 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 14 394 54.259 T 23-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 DLM_1054 b0d424d3d4fc78d0056e3e11927783fe 308 Pfam PF05036 Sporulation related domain 234 306 3.9E-18 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 DLM_1054 b0d424d3d4fc78d0056e3e11927783fe 308 SUPERFAMILY SSF110997 233 306 1.31E-15 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_1054 b0d424d3d4fc78d0056e3e11927783fe 308 Gene3D G3DSA:3.30.70.1070 237 308 1.6E-10 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_2607 887b64ff3696413101e4c9c6a200cd43 215 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 18 194 8.1E-53 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 DLM_2607 887b64ff3696413101e4c9c6a200cd43 215 Pfam PF03695 Uncharacterised protein family (UPF0149) 20 195 2.5E-33 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 DLM_2607 887b64ff3696413101e4c9c6a200cd43 215 SUPERFAMILY SSF101327 17 195 4.71E-29 T 23-10-2018 IPR036255 YgfB-like superfamily DLM_3261 5a073a3bed685cc0a4e0c71160a703b5 281 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 270 9.5E-66 T 23-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DLM_3261 5a073a3bed685cc0a4e0c71160a703b5 281 Gene3D G3DSA:3.40.190.100 110 216 1.0E-91 T 23-10-2018 DLM_3261 5a073a3bed685cc0a4e0c71160a703b5 281 Gene3D G3DSA:3.40.190.10 28 279 1.0E-91 T 23-10-2018 DLM_3261 5a073a3bed685cc0a4e0c71160a703b5 281 SUPERFAMILY SSF53850 19 280 1.75E-76 T 23-10-2018 DLM_0034 1e3d3600ab29cd47564799edc2da3c11 317 Gene3D G3DSA:1.20.120.1460 238 309 2.7E-22 T 23-10-2018 DLM_0034 1e3d3600ab29cd47564799edc2da3c11 317 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_0034 1e3d3600ab29cd47564799edc2da3c11 317 PIRSF PIRSF006621 1 311 6.4E-75 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_0034 1e3d3600ab29cd47564799edc2da3c11 317 Pfam PF01207 Dihydrouridine synthase (Dus) 1 301 9.4E-85 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_0034 1e3d3600ab29cd47564799edc2da3c11 317 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 3.5E-140 T 23-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DLM_0034 1e3d3600ab29cd47564799edc2da3c11 317 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 49.162 T 23-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DLM_0034 1e3d3600ab29cd47564799edc2da3c11 317 SUPERFAMILY SSF51395 1 292 6.0E-73 T 23-10-2018 DLM_0034 1e3d3600ab29cd47564799edc2da3c11 317 Gene3D G3DSA:3.20.20.70 1 234 1.0E-71 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1810 70d18ef061d3584570e59b56ce659847 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.88 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DLM_1810 70d18ef061d3584570e59b56ce659847 276 Gene3D G3DSA:3.10.310.10 5 272 6.5E-100 T 23-10-2018 DLM_1810 70d18ef061d3584570e59b56ce659847 276 Gene3D G3DSA:3.10.310.10 117 263 6.5E-100 T 23-10-2018 DLM_1810 70d18ef061d3584570e59b56ce659847 276 Pfam PF01678 Diaminopimelate epimerase 5 124 1.7E-31 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DLM_1810 70d18ef061d3584570e59b56ce659847 276 Pfam PF01678 Diaminopimelate epimerase 154 267 1.9E-31 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DLM_1810 70d18ef061d3584570e59b56ce659847 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 3.3E-95 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DLM_1810 70d18ef061d3584570e59b56ce659847 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 23-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DLM_1810 70d18ef061d3584570e59b56ce659847 276 SUPERFAMILY SSF54506 2 275 1.73E-54 T 23-10-2018 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 1.8E-115 T 23-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 6.2E-77 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 23-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 SUPERFAMILY SSF51905 2 313 3.28E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 302 3.6E-49 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 Gene3D G3DSA:3.50.50.60 118 243 1.2E-118 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 Gene3D G3DSA:3.50.50.60 9 312 1.2E-118 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.0E-38 T 23-10-2018 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.0E-38 T 23-10-2018 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.0E-38 T 23-10-2018 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.0E-38 T 23-10-2018 DLM_2287 8d7f4410920599d3b97201a308f79b7b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.0E-38 T 23-10-2018 DLM_1742 b5e04837dded0e0ffe54c7fde3736628 195 Gene3D G3DSA:3.40.50.850 7 193 2.3E-52 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_1742 b5e04837dded0e0ffe54c7fde3736628 195 SUPERFAMILY SSF52499 8 189 3.92E-44 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_1742 b5e04837dded0e0ffe54c7fde3736628 195 Pfam PF00857 Isochorismatase family 13 183 1.2E-26 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 DLM_1993 35995947607753182b057db77abf1c10 305 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 300 5.0E-22 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DLM_1993 35995947607753182b057db77abf1c10 305 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 271 1.3E-46 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DLM_1993 35995947607753182b057db77abf1c10 305 Gene3D G3DSA:3.40.50.720 91 274 3.7E-108 T 23-10-2018 DLM_1993 35995947607753182b057db77abf1c10 305 SUPERFAMILY SSF51735 91 272 2.01E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1993 35995947607753182b057db77abf1c10 305 Gene3D G3DSA:3.40.50.720 5 297 3.7E-108 T 23-10-2018 DLM_1993 35995947607753182b057db77abf1c10 305 SUPERFAMILY SSF52283 4 126 5.86E-26 T 23-10-2018 DLM_3832 6b3259909ace65da1b1f2b8f8fce39f3 136 Gene3D G3DSA:3.30.420.270 63 131 1.9E-12 T 23-10-2018 DLM_3832 6b3259909ace65da1b1f2b8f8fce39f3 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 134 2.8E-30 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DLM_0153 87658a9a55f2fe4e188a69f7c5acdf01 173 Pfam PF02417 Chromate transporter 6 168 5.0E-35 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 Pfam PF00005 ABC transporter 18 184 8.2E-19 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 Gene3D G3DSA:3.40.50.300 3 280 9.6E-57 T 23-10-2018 DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 Gene3D G3DSA:3.40.50.300 282 543 1.9E-52 T 23-10-2018 DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 SUPERFAMILY SSF52540 3 239 6.03E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 Pfam PF12848 ABC transporter 224 310 4.6E-20 T 23-10-2018 IPR032781 ABC-transporter extension domain DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 Pfam PF00005 ABC transporter 340 479 4.2E-19 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 SUPERFAMILY SSF52540 327 524 2.74E-42 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 SMART SM00382 348 525 6.2E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3068 3e3bf919c18c6d096d94aa77d8c22679 543 SMART SM00382 26 228 3.6E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 285 402 4.5E-25 T 23-10-2018 IPR000014 PAS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Gene3D G3DSA:3.30.450.20 268 402 4.4E-38 T 23-10-2018 DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SUPERFAMILY SSF55785 292 402 3.87E-31 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SMART SM00116 81 128 1.1E-5 T 23-10-2018 IPR000644 CBS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SMART SM00116 145 192 15.0 T 23-10-2018 IPR000644 CBS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SMART SM00116 16 64 0.0023 T 23-10-2018 IPR000644 CBS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SMART SM00116 207 255 1.3 T 23-10-2018 IPR000644 CBS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Pfam PF00571 CBS domain 10 62 6.0E-6 T 23-10-2018 IPR000644 CBS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Pfam PF00571 CBS domain 74 124 5.4E-10 T 23-10-2018 IPR000644 CBS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Pfam PF00571 CBS domain 201 254 3.6E-5 T 23-10-2018 IPR000644 CBS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Pfam PF00990 Diguanylate cyclase, GGDEF domain 406 563 7.0E-48 T 23-10-2018 IPR000160 GGDEF domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Gene3D G3DSA:3.10.580.10 134 262 6.6E-18 T 23-10-2018 DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Pfam PF00563 EAL domain 584 818 2.2E-76 T 23-10-2018 IPR001633 EAL domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 403 565 1.3E-40 T 23-10-2018 IPR000160 GGDEF domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 PIRSF PIRSF005925 394 833 9.8E-143 T 23-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 PIRSF PIRSF005925 270 403 1.9E-11 T 23-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SUPERFAMILY SSF141868 584 830 1.44E-89 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SUPERFAMILY SSF54631 7 124 3.79E-23 T 23-10-2018 DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SMART SM00086 353 395 8.2E-8 T 23-10-2018 IPR001610 PAC motif DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Gene3D G3DSA:3.20.20.450 581 832 5.6E-102 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SMART SM00267 395 567 4.6E-62 T 23-10-2018 IPR000160 GGDEF domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SMART SM00052 577 823 2.5E-115 T 23-10-2018 IPR001633 EAL domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SMART SM00091 281 347 1.3E-8 T 23-10-2018 IPR000014 PAS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Gene3D G3DSA:3.10.580.10 3 130 2.6E-27 T 23-10-2018 DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Pfam PF13426 PAS domain 292 394 1.4E-17 T 23-10-2018 IPR000014 PAS domain DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SUPERFAMILY SSF54631 139 259 1.77E-16 T 23-10-2018 DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 Gene3D G3DSA:3.30.70.270 403 580 3.3E-61 T 23-10-2018 DLM_2319 b3f5dfdf1f04feb67e97556a4f2c8722 833 SUPERFAMILY SSF55073 411 568 6.2E-48 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 SUPERFAMILY SSF51735 6 240 2.42E-47 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 0.0084 T 23-10-2018 DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.3E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.3E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.3E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.3E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 238 1.0E-33 T 23-10-2018 DLM_1328 43cf83c0568accb2d667d69dc54eb01a 242 Gene3D G3DSA:3.40.50.720 1 241 1.6E-47 T 23-10-2018 DLM_2344 95fda8cdfd827b1a86a970d73cf5dd55 372 Pfam PF01924 Hydrogenase formation hypA family 13 364 2.0E-153 T 23-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DLM_2344 95fda8cdfd827b1a86a970d73cf5dd55 372 Gene3D G3DSA:3.40.50.11740 61 301 9.3E-106 T 23-10-2018 DLM_2344 95fda8cdfd827b1a86a970d73cf5dd55 372 Gene3D G3DSA:1.10.10.2140 315 367 1.8E-24 T 23-10-2018 DLM_2344 95fda8cdfd827b1a86a970d73cf5dd55 372 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 15 366 6.8E-143 T 23-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DLM_2344 95fda8cdfd827b1a86a970d73cf5dd55 372 PIRSF PIRSF005622 1 368 1.7E-156 T 23-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DLM_2344 95fda8cdfd827b1a86a970d73cf5dd55 372 Gene3D G3DSA:3.40.50.11750 27 260 9.3E-106 T 23-10-2018 DLM_2820 b6c6a60bee13a4a32ef5a2c174c1f0e3 571 SUPERFAMILY SSF52794 108 208 4.88E-35 T 23-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DLM_2820 b6c6a60bee13a4a32ef5a2c174c1f0e3 571 SUPERFAMILY SSF52794 3 98 3.31E-18 T 23-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DLM_2820 b6c6a60bee13a4a32ef5a2c174c1f0e3 571 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 110 193 8.4E-34 T 23-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DLM_2820 b6c6a60bee13a4a32ef5a2c174c1f0e3 571 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 227 566 1.5E-140 T 23-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DLM_2820 b6c6a60bee13a4a32ef5a2c174c1f0e3 571 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 112 199 7.0E-16 T 23-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DLM_2820 b6c6a60bee13a4a32ef5a2c174c1f0e3 571 Gene3D G3DSA:3.40.50.2300 101 207 9.7E-38 T 23-10-2018 DLM_2820 b6c6a60bee13a4a32ef5a2c174c1f0e3 571 Gene3D G3DSA:3.40.50.2300 1 100 3.5E-14 T 23-10-2018 DLM_0807 d3c39f162bd742bad6384692e1fbffa7 281 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 276 5.0E-119 T 23-10-2018 IPR017828 Squalene synthase HpnD-like GO:0016117|GO:0016767 DLM_0807 d3c39f162bd742bad6384692e1fbffa7 281 Gene3D G3DSA:1.10.600.10 2 276 4.5E-90 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily DLM_0807 d3c39f162bd742bad6384692e1fbffa7 281 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 23-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DLM_0807 d3c39f162bd742bad6384692e1fbffa7 281 SUPERFAMILY SSF48576 3 278 4.08E-92 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily DLM_0807 d3c39f162bd742bad6384692e1fbffa7 281 Pfam PF00494 Squalene/phytoene synthase 13 265 5.8E-83 T 23-10-2018 DLM_2348 7342ae046bc3b838a95a7ea167d1d3e6 479 Pfam PF00374 Nickel-dependent hydrogenase 38 115 6.3E-19 T 23-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 DLM_2348 7342ae046bc3b838a95a7ea167d1d3e6 479 Pfam PF00374 Nickel-dependent hydrogenase 144 479 9.0E-44 T 23-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 DLM_2348 7342ae046bc3b838a95a7ea167d1d3e6 479 Gene3D G3DSA:1.10.645.10 3 479 3.7E-114 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2348 7342ae046bc3b838a95a7ea167d1d3e6 479 SUPERFAMILY SSF56762 6 479 3.4E-119 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2348 7342ae046bc3b838a95a7ea167d1d3e6 479 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 38 63 - T 23-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 SMART SM00283 280 541 5.6E-63 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 Pfam PF08447 PAS fold 31 114 3.9E-16 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 SUPERFAMILY SSF55785 22 114 3.49E-27 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 Gene3D G3DSA:3.30.450.20 10 144 8.7E-27 T 23-10-2018 DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 SMART SM00086 80 121 0.0034 T 23-10-2018 IPR001610 PAC motif DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 112 1.3E-16 T 23-10-2018 IPR000014 PAS domain DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 SUPERFAMILY SSF58104 264 541 1.96E-61 T 23-10-2018 DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 SMART SM00091 8 75 0.0018 T 23-10-2018 IPR000014 PAS domain DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 Gene3D G3DSA:1.10.287.950 215 542 4.5E-63 T 23-10-2018 DLM_2384 853495f37c7ae676e12c3ffa0e9789b8 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 508 8.4E-44 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3955 ffd858ce36bd0d36f0832466298c0744 269 Gene3D G3DSA:2.30.30.60 120 169 3.5E-17 T 23-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DLM_3955 ffd858ce36bd0d36f0832466298c0744 269 SUPERFAMILY SSF82689 172 266 4.18E-15 T 23-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DLM_3955 ffd858ce36bd0d36f0832466298c0744 269 SUPERFAMILY SSF50182 105 170 2.42E-16 T 23-10-2018 IPR010920 LSM domain superfamily DLM_3955 ffd858ce36bd0d36f0832466298c0744 269 Gene3D G3DSA:3.30.70.100 171 261 2.5E-5 T 23-10-2018 DLM_3955 ffd858ce36bd0d36f0832466298c0744 269 SUPERFAMILY SSF82861 20 102 3.79E-16 T 23-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DLM_3955 ffd858ce36bd0d36f0832466298c0744 269 Pfam PF00924 Mechanosensitive ion channel 64 254 8.2E-40 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 Gene3D G3DSA:3.30.565.10 292 448 9.5E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 Pfam PF00072 Response regulator receiver domain 471 581 9.0E-13 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 SMART SM00448 469 581 3.6E-12 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 444 1.5E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 Gene3D G3DSA:1.10.287.130 192 290 3.0E-18 T 23-10-2018 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 2.2E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 2.2E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 2.2E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 2.2E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 SUPERFAMILY SSF55874 282 446 9.04E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 292 7.4E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 SUPERFAMILY SSF52172 467 588 3.98E-23 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 SMART SM00388 227 292 4.1E-14 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 Gene3D G3DSA:3.40.50.2300 465 590 2.0E-21 T 23-10-2018 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 SUPERFAMILY SSF47384 214 292 1.1E-14 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1947 9492eb6c204864bd9bfb6242eaa9d203 597 SMART SM00387 336 447 7.4E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0165 9409c60d5d3942f41a1c106c11c8388d 298 Gene3D G3DSA:3.40.50.150 106 297 4.0E-58 T 23-10-2018 DLM_0165 9409c60d5d3942f41a1c106c11c8388d 298 SUPERFAMILY SSF53335 78 280 1.02E-41 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0165 9409c60d5d3942f41a1c106c11c8388d 298 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 6.7E-73 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DLM_0165 9409c60d5d3942f41a1c106c11c8388d 298 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 294 6.3E-93 T 23-10-2018 DLM_0165 9409c60d5d3942f41a1c106c11c8388d 298 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 294 31.859 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DLM_0165 9409c60d5d3942f41a1c106c11c8388d 298 PIRSF PIRSF000401 1 296 3.1E-95 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DLM_0822 8602423120470d473c7386e04fe22d8c 211 SUPERFAMILY SSF46894 136 193 1.19E-17 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_0822 8602423120470d473c7386e04fe22d8c 211 SMART SM00421 139 196 1.1E-21 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0822 8602423120470d473c7386e04fe22d8c 211 SMART SM00448 4 115 6.6E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0822 8602423120470d473c7386e04fe22d8c 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 1.4E-21 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0822 8602423120470d473c7386e04fe22d8c 211 Gene3D G3DSA:1.10.10.10 137 198 1.7E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0822 8602423120470d473c7386e04fe22d8c 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0822 8602423120470d473c7386e04fe22d8c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.0E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0822 8602423120470d473c7386e04fe22d8c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.0E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0822 8602423120470d473c7386e04fe22d8c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.0E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0822 8602423120470d473c7386e04fe22d8c 211 Pfam PF00072 Response regulator receiver domain 7 115 3.5E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0822 8602423120470d473c7386e04fe22d8c 211 Gene3D G3DSA:3.40.50.2300 3 131 1.5E-38 T 23-10-2018 DLM_0822 8602423120470d473c7386e04fe22d8c 211 SUPERFAMILY SSF52172 1 152 7.83E-32 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1954 c0ad3de155f33c9e7cc6a5371929d94a 516 SMART SM00257 28 75 4.4E-7 T 23-10-2018 IPR018392 LysM domain DLM_1954 c0ad3de155f33c9e7cc6a5371929d94a 516 SUPERFAMILY SSF54106 27 75 2.35E-5 T 23-10-2018 DLM_1954 c0ad3de155f33c9e7cc6a5371929d94a 516 Gene3D G3DSA:2.60.120.1440 108 248 7.8E-9 T 23-10-2018 DLM_1954 c0ad3de155f33c9e7cc6a5371929d94a 516 Gene3D G3DSA:3.10.350.10 27 75 1.4E-8 T 23-10-2018 IPR036779 LysM domain superfamily DLM_1954 c0ad3de155f33c9e7cc6a5371929d94a 516 PIRSF PIRSF029644 3 515 1.5E-123 T 23-10-2018 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 DLM_1954 c0ad3de155f33c9e7cc6a5371929d94a 516 Pfam PF04773 FecR protein 119 219 1.2E-15 T 23-10-2018 IPR006860 FecR protein DLM_1954 c0ad3de155f33c9e7cc6a5371929d94a 516 Gene3D G3DSA:2.60.40.10 342 437 4.7E-6 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_1954 c0ad3de155f33c9e7cc6a5371929d94a 516 Pfam PF01476 LysM domain 29 75 1.1E-7 T 23-10-2018 IPR018392 LysM domain DLM_4340 facba71e5c8d0e243e6490144dd20418 136 Gene3D G3DSA:3.30.428.10 10 135 6.8E-40 T 23-10-2018 IPR036265 HIT-like superfamily DLM_4340 facba71e5c8d0e243e6490144dd20418 136 PIRSF PIRSF000714 1 136 9.4E-40 T 23-10-2018 IPR026026 Histidine triad hydrolase, Hint-type DLM_4340 facba71e5c8d0e243e6490144dd20418 136 SUPERFAMILY SSF54197 1 131 4.49E-38 T 23-10-2018 IPR036265 HIT-like superfamily DLM_4340 facba71e5c8d0e243e6490144dd20418 136 Pfam PF01230 HIT domain 13 96 6.7E-16 T 23-10-2018 IPR001310 Histidine triad (HIT) protein DLM_2223 4f00e281cc13a28e612dde360965ce2f 254 Pfam PF11760 Cobalamin synthesis G N-terminal 43 122 1.6E-30 T 23-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 DLM_2223 4f00e281cc13a28e612dde360965ce2f 254 Gene3D G3DSA:3.40.50.11220 2 117 1.2E-26 T 23-10-2018 DLM_2223 4f00e281cc13a28e612dde360965ce2f 254 SUPERFAMILY SSF159672 3 237 1.7E-40 T 23-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 DLM_2223 4f00e281cc13a28e612dde360965ce2f 254 Gene3D G3DSA:3.30.420.180 118 245 1.6E-37 T 23-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 DLM_2223 4f00e281cc13a28e612dde360965ce2f 254 Pfam PF01890 Cobalamin synthesis G C-terminus 127 242 1.1E-33 T 23-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 Gene3D G3DSA:1.10.3730.10 158 265 5.1E-34 T 23-10-2018 DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 SUPERFAMILY SSF51735 1 153 4.03E-39 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 SUPERFAMILY SSF48179 156 263 3.23E-29 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 260 24.541 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 259 3.1E-72 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 PIRSF PIRSF000193 1 263 5.4E-69 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 93 3.6E-18 T 23-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 156 260 1.9E-28 T 23-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DLM_4024 5fc1f303b970e9fd2751bc7c0e8f9aa8 267 Gene3D G3DSA:3.40.50.720 1 157 1.8E-47 T 23-10-2018 DLM_1734 ef49dfffbac886e894496ba1a65cbbec 207 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 23 194 1.3E-57 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DLM_1734 ef49dfffbac886e894496ba1a65cbbec 207 Hamap MF_00013 Octanoyltransferase [lipB]. 2 203 37.407 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DLM_1734 ef49dfffbac886e894496ba1a65cbbec 207 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 68 83 - T 23-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DLM_1734 ef49dfffbac886e894496ba1a65cbbec 207 PIRSF PIRSF016262 2 207 1.1E-58 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DLM_1734 ef49dfffbac886e894496ba1a65cbbec 207 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 156 4.6E-8 T 23-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DLM_1734 ef49dfffbac886e894496ba1a65cbbec 207 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 72 125 2.0E-21 T 23-10-2018 DLM_1734 ef49dfffbac886e894496ba1a65cbbec 207 SUPERFAMILY SSF55681 4 201 1.57E-68 T 23-10-2018 DLM_1734 ef49dfffbac886e894496ba1a65cbbec 207 Gene3D G3DSA:3.30.930.10 2 201 8.9E-62 T 23-10-2018 DLM_2062 535dcd2b63c5841a9fc8ce95573dc09c 333 Pfam PF00296 Luciferase-like monooxygenase 16 298 7.0E-30 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DLM_2062 535dcd2b63c5841a9fc8ce95573dc09c 333 Gene3D G3DSA:3.20.20.30 2 330 3.8E-84 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_2062 535dcd2b63c5841a9fc8ce95573dc09c 333 SUPERFAMILY SSF51679 5 326 7.17E-64 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_2062 535dcd2b63c5841a9fc8ce95573dc09c 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 327 1.2E-106 T 23-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 DLM_2586 c63d842e0b6d7ec3804d8cfe7af8c993 209 Gene3D G3DSA:1.10.8.420 1 52 2.6E-20 T 23-10-2018 DLM_2586 c63d842e0b6d7ec3804d8cfe7af8c993 209 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 7.6E-67 T 23-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DLM_2586 c63d842e0b6d7ec3804d8cfe7af8c993 209 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 94.167 T 23-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DLM_2586 c63d842e0b6d7ec3804d8cfe7af8c993 209 Pfam PF13662 Toprim domain 80 171 1.3E-21 T 23-10-2018 IPR006171 TOPRIM domain DLM_2586 c63d842e0b6d7ec3804d8cfe7af8c993 209 Gene3D G3DSA:3.40.1360.10 77 198 1.1E-39 T 23-10-2018 DLM_2586 c63d842e0b6d7ec3804d8cfe7af8c993 209 Pfam PF02132 RecR protein 40 77 6.9E-14 T 23-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DLM_2586 c63d842e0b6d7ec3804d8cfe7af8c993 209 SMART SM00493 80 165 2.3E-12 T 23-10-2018 IPR006171 TOPRIM domain DLM_2586 c63d842e0b6d7ec3804d8cfe7af8c993 209 SUPERFAMILY SSF111304 2 198 4.97E-72 T 23-10-2018 IPR023627 Recombination protein RecR DLM_4310 00db84d825c80f880d796497e8ee9510 167 PIRSF PIRSF004749 1 167 6.4E-56 T 23-10-2018 IPR023635 Peptide deformylase DLM_4310 00db84d825c80f880d796497e8ee9510 167 SUPERFAMILY SSF56420 3 164 4.58E-61 T 23-10-2018 IPR036821 Peptide deformylase superfamily DLM_4310 00db84d825c80f880d796497e8ee9510 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 4.4E-58 T 23-10-2018 IPR023635 Peptide deformylase DLM_4310 00db84d825c80f880d796497e8ee9510 167 Gene3D G3DSA:3.90.45.10 1 167 1.7E-62 T 23-10-2018 IPR036821 Peptide deformylase superfamily DLM_4310 00db84d825c80f880d796497e8ee9510 167 PRINTS PR01576 Peptide deformylase signature 101 119 2.2E-37 T 23-10-2018 IPR023635 Peptide deformylase DLM_4310 00db84d825c80f880d796497e8ee9510 167 PRINTS PR01576 Peptide deformylase signature 120 149 2.2E-37 T 23-10-2018 IPR023635 Peptide deformylase DLM_4310 00db84d825c80f880d796497e8ee9510 167 PRINTS PR01576 Peptide deformylase signature 89 100 2.2E-37 T 23-10-2018 IPR023635 Peptide deformylase DLM_4310 00db84d825c80f880d796497e8ee9510 167 PRINTS PR01576 Peptide deformylase signature 33 62 2.2E-37 T 23-10-2018 IPR023635 Peptide deformylase DLM_4310 00db84d825c80f880d796497e8ee9510 167 Pfam PF01327 Polypeptide deformylase 4 151 5.4E-52 T 23-10-2018 IPR023635 Peptide deformylase DLM_4310 00db84d825c80f880d796497e8ee9510 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.3 T 23-10-2018 IPR023635 Peptide deformylase DLM_2938 b78487663744a832bed7584bb549d8e4 382 SUPERFAMILY SSF111352 2 356 5.1E-92 T 23-10-2018 DLM_2938 b78487663744a832bed7584bb549d8e4 382 Pfam PF00909 Ammonium Transporter Family 2 373 2.2E-86 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DLM_2938 b78487663744a832bed7584bb549d8e4 382 Gene3D G3DSA:1.10.3430.10 1 381 1.6E-97 T 23-10-2018 IPR029020 Ammonium/urea transporter DLM_1551 2ced7f695d9c1569887c3fece02b09e8 444 Gene3D G3DSA:3.40.50.2300 153 294 5.4E-69 T 23-10-2018 DLM_1551 2ced7f695d9c1569887c3fece02b09e8 444 Pfam PF13458 Periplasmic binding protein 31 402 3.5E-79 T 23-10-2018 IPR028081 Leucine-binding protein domain DLM_1551 2ced7f695d9c1569887c3fece02b09e8 444 Gene3D G3DSA:3.40.50.2300 41 363 5.4E-69 T 23-10-2018 DLM_1551 2ced7f695d9c1569887c3fece02b09e8 444 SUPERFAMILY SSF53822 41 408 1.18E-45 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 SMART SM00052 417 665 6.1E-50 T 23-10-2018 IPR001633 EAL domain DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 Gene3D G3DSA:3.30.450.40 300 405 3.6E-7 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 SUPERFAMILY SSF55073 9 77 6.51E-9 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 Gene3D G3DSA:1.10.490.10 94 243 8.7E-8 T 23-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 SUPERFAMILY SSF55781 313 395 4.77E-9 T 23-10-2018 DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 Pfam PF00563 EAL domain 428 660 1.4E-50 T 23-10-2018 IPR001633 EAL domain DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 Gene3D G3DSA:3.30.70.270 4 78 3.4E-12 T 23-10-2018 DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 Gene3D G3DSA:3.20.20.450 426 674 2.4E-63 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 Pfam PF00990 Diguanylate cyclase, GGDEF domain 12 73 5.3E-7 T 23-10-2018 IPR000160 GGDEF domain DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 Pfam PF13185 GAF domain 312 397 1.2E-7 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_2946 c4726a5fa013e7c3a5b417adf37c6c24 758 SUPERFAMILY SSF141868 429 674 4.97E-57 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3367 34f7317ed1a11a8e80c82da3dbaff54e 171 Pfam PF00355 Rieske [2Fe-2S] domain 86 156 1.9E-10 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DLM_3367 34f7317ed1a11a8e80c82da3dbaff54e 171 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 1 168 1.6E-62 T 23-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 DLM_3367 34f7317ed1a11a8e80c82da3dbaff54e 171 SUPERFAMILY SSF50022 8 167 4.48E-40 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_3367 34f7317ed1a11a8e80c82da3dbaff54e 171 PRINTS PR00162 Rieske 2Fe-2S subunit signature 140 152 1.4E-7 T 23-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DLM_3367 34f7317ed1a11a8e80c82da3dbaff54e 171 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 139 1.4E-7 T 23-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DLM_3367 34f7317ed1a11a8e80c82da3dbaff54e 171 PRINTS PR00162 Rieske 2Fe-2S subunit signature 96 107 1.4E-7 T 23-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DLM_3367 34f7317ed1a11a8e80c82da3dbaff54e 171 Gene3D G3DSA:2.102.10.10 20 168 2.2E-47 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 SUPERFAMILY SSF55120 10 241 8.63E-81 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 Gene3D G3DSA:3.30.2350.10 1 242 1.1E-89 T 23-10-2018 DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 4.8E-57 T 23-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 300 18.574 T 23-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 Gene3D G3DSA:2.30.130.10 243 304 2.7E-6 T 23-10-2018 IPR036974 PUA domain superfamily GO:0003723 DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 SUPERFAMILY SSF88697 241 300 7.95E-9 T 23-10-2018 IPR015947 PUA-like superfamily DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 238 6.9E-12 T 23-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 242 300 3.2E-14 T 23-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2569 d91bf6d04fd5c3104a37d4b6606a7517 307 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 216 7.0E-76 T 23-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 SMART SM00304 272 325 23.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 SMART SM00304 211 265 2.0E-12 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 SUPERFAMILY SSF58104 233 542 8.76E-64 T 23-10-2018 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 Gene3D G3DSA:1.10.287.950 211 542 1.6E-65 T 23-10-2018 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 Pfam PF00672 HAMP domain 211 260 9.5E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 Gene3D G3DSA:3.30.450.290 40 185 2.1E-5 T 23-10-2018 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 508 1.3E-31 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 2.7E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 2.7E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 2.7E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1423 5ce7ebde240af8fa60bc27423f10e1af 542 SMART SM00283 280 541 8.1E-53 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 SUPERFAMILY SSF53067 19 195 1.07E-52 T 23-10-2018 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 Gene3D G3DSA:3.30.420.40 193 364 1.2E-112 T 23-10-2018 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 Gene3D G3DSA:1.20.1270.10 523 618 5.7E-23 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 PRINTS PR00301 70kDa heat shock protein signature 363 383 5.3E-54 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 PRINTS PR00301 70kDa heat shock protein signature 388 407 5.3E-54 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 PRINTS PR00301 70kDa heat shock protein signature 332 348 5.3E-54 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 PRINTS PR00301 70kDa heat shock protein signature 469 485 5.3E-54 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 PRINTS PR00301 70kDa heat shock protein signature 151 171 5.3E-54 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 PRINTS PR00301 70kDa heat shock protein signature 210 220 5.3E-54 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 5.3E-54 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 5.3E-54 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 Pfam PF00012 Hsp70 protein 21 602 5.1E-180 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 617 8.4E-274 T 23-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 619 43.386 T 23-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 SUPERFAMILY SSF53067 199 380 1.57E-48 T 23-10-2018 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 Gene3D G3DSA:3.90.640.10 237 314 1.2E-112 T 23-10-2018 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 Gene3D G3DSA:3.30.420.40 22 377 1.2E-112 T 23-10-2018 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 SUPERFAMILY SSF100920 386 538 6.67E-48 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 Gene3D G3DSA:2.60.34.10 382 522 2.5E-47 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DLM_3224 34ef242d3f996e212ccc8898624bc98c 619 SUPERFAMILY SSF100934 507 617 3.3E-28 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 ProSitePatterns PS01071 grpE protein signature. 134 176 - T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 Gene3D G3DSA:3.90.20.20 20 121 4.1E-21 T 23-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 PRINTS PR00773 GrpE protein signature 78 93 1.7E-22 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 PRINTS PR00773 GrpE protein signature 50 66 1.7E-22 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 PRINTS PR00773 GrpE protein signature 157 176 1.7E-22 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 PRINTS PR00773 GrpE protein signature 131 146 1.7E-22 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 Gene3D G3DSA:2.30.22.10 123 178 5.6E-20 T 23-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 Hamap MF_01151 Protein GrpE [grpE]. 2 178 18.459 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 SUPERFAMILY SSF51064 126 179 2.48E-15 T 23-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 Pfam PF01025 GrpE 18 178 5.1E-43 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DLM_3026 96c883a9a7ea92097b6e792a16ea2ec8 181 SUPERFAMILY SSF58014 30 120 1.96E-20 T 23-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 Pfam PF05231 MASE1 13 297 2.1E-13 T 23-10-2018 IPR007895 MASE1 DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 Gene3D G3DSA:3.30.70.270 462 632 1.3E-56 T 23-10-2018 DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 Pfam PF13426 PAS domain 338 434 6.5E-7 T 23-10-2018 IPR000014 PAS domain DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 SUPERFAMILY SSF55073 472 628 4.32E-50 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 Gene3D G3DSA:3.30.450.20 323 451 8.5E-14 T 23-10-2018 DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 469 624 2.1E-45 T 23-10-2018 IPR000160 GGDEF domain DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 SMART SM00267 456 628 1.6E-60 T 23-10-2018 IPR000160 GGDEF domain DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 442 1.5E-8 T 23-10-2018 IPR000014 PAS domain DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 465 627 1.2E-48 T 23-10-2018 IPR000160 GGDEF domain DLM_3841 4a1134db280ac8a59452ed27fdad709f 636 SUPERFAMILY SSF55785 316 433 1.15E-11 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Gene3D G3DSA:3.20.20.60 506 837 7.2E-115 T 23-10-2018 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 714 732 - T 23-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 SUPERFAMILY SSF51621 525 816 2.62E-99 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Pfam PF00391 PEP-utilising enzyme, mobile domain 424 497 5.4E-24 T 23-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Gene3D G3DSA:1.10.274.10 301 419 8.6E-66 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Gene3D G3DSA:3.50.30.10 284 505 8.6E-66 T 23-10-2018 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 PRINTS PR00107 Phosphocarrier protein signature 208 223 8.6E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 PRINTS PR00107 Phosphocarrier protein signature 183 199 8.6E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 PRINTS PR00107 Phosphocarrier protein signature 223 240 8.6E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 72 84 - T 23-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 SUPERFAMILY SSF51261 8 153 2.09E-46 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 SUPERFAMILY SSF55594 175 257 9.29E-23 T 23-10-2018 IPR035895 HPr-like superfamily DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 524 806 9.0E-101 T 23-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 767 779 2.1E-19 T 23-10-2018 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 731 746 2.1E-19 T 23-10-2018 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 565 584 2.1E-19 T 23-10-2018 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 714 729 2.1E-19 T 23-10-2018 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Pfam PF00381 PTS HPr component phosphorylation site 174 251 2.7E-23 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Gene3D G3DSA:2.70.70.10 3 155 7.3E-48 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 173 251 1.8E-22 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Pfam PF05524 PEP-utilising enzyme, N-terminal 284 399 1.7E-21 T 23-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 9 132 4.3E-42 T 23-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 282 831 3.4E-154 T 23-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 183 190 - T 23-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 SUPERFAMILY SSF52009 398 518 1.19E-32 T 23-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 209 224 - T 23-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 SUPERFAMILY SSF47831 316 416 9.29E-23 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 10 130 7.9E-39 T 23-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DLM_3347 1e10921c7008f1532f9b3018ca08d895 837 Gene3D G3DSA:3.30.1340.10 173 255 4.5E-25 T 23-10-2018 IPR035895 HPr-like superfamily DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 1.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 1.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 1.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 173 8.7E-4 T 23-10-2018 DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 1 234 6.9E-109 T 23-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 Gene3D G3DSA:3.40.50.720 1 234 4.0E-76 T 23-10-2018 DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 9.7E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 9.7E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 9.7E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 9.7E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 9.7E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 SUPERFAMILY SSF51735 2 235 8.56E-78 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1989 9a0b8b8e6f2cd92e13709d2744618745 235 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 3 233 3.8E-63 T 23-10-2018 DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 SUPERFAMILY SSF52540 55 292 8.04E-70 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 SUPERFAMILY SSF46689 264 382 4.44E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 SMART SM00382 71 214 2.6E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 Pfam PF02954 Bacterial regulatory protein, Fis family 343 379 8.6E-7 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 75 88 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 Gene3D G3DSA:1.10.10.60 301 384 1.0E-10 T 23-10-2018 DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 264 273 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 Pfam PF00158 Sigma-54 interaction domain 58 217 1.1E-67 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 Gene3D G3DSA:3.40.50.300 38 222 2.8E-64 T 23-10-2018 DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 Gene3D G3DSA:1.10.8.60 224 300 1.1E-21 T 23-10-2018 DLM_1523 f27dbe54b4d8a0671f95bf7aa21145ed 389 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 137 152 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 Gene3D G3DSA:1.10.150.240 19 88 2.2E-52 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 Gene3D G3DSA:3.40.50.1000 8 209 2.2E-52 T 23-10-2018 IPR023214 HAD superfamily DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 6.3E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 6.3E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 6.3E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 6.3E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 188 1.6E-33 T 23-10-2018 DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 67 188 5.6E-16 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0418 3c609460f4ab0fe4ab1b8eb91b0c063d 224 SUPERFAMILY SSF56784 5 217 1.48E-51 T 23-10-2018 IPR036412 HAD-like superfamily DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 387 3.6E-21 T 23-10-2018 IPR000160 GGDEF domain DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 SUPERFAMILY SSF141868 408 643 1.24E-74 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 SUPERFAMILY SSF55073 233 392 6.83E-28 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 Gene3D G3DSA:3.20.20.450 406 648 2.7E-80 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 Pfam PF00990 Diguanylate cyclase, GGDEF domain 228 387 2.0E-25 T 23-10-2018 IPR000160 GGDEF domain DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 SMART SM00267 218 392 5.8E-27 T 23-10-2018 IPR000160 GGDEF domain DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 SMART SM00052 402 647 9.5E-94 T 23-10-2018 IPR001633 EAL domain DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 Pfam PF00563 EAL domain 408 642 2.6E-64 T 23-10-2018 IPR001633 EAL domain DLM_2068 bd7c53f90a803ccf0b4cc1bdf86a8027 649 Gene3D G3DSA:3.30.70.270 223 405 3.0E-35 T 23-10-2018 DLM_3621 54a3b59c2cc02c03d2535fdf517ce3aa 232 Gene3D G3DSA:3.40.50.1820 3 230 5.8E-57 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3621 54a3b59c2cc02c03d2535fdf517ce3aa 232 SUPERFAMILY SSF53474 4 232 1.61E-44 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3621 54a3b59c2cc02c03d2535fdf517ce3aa 232 Pfam PF01738 Dienelactone hydrolase family 16 231 1.6E-49 T 23-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 DLM_1536 51f055b8c6fe85f7f7f2d0184a711b23 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 31 293 3.8E-32 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 415 575 2.3E-45 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 Pfam PF00672 HAMP domain 280 329 5.0E-11 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 Pfam PF02743 Cache domain 22 242 1.3E-23 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 SMART SM00304 279 333 2.7E-11 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 SMART SM00283 348 609 7.3E-68 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 SUPERFAMILY SSF58104 301 610 5.49E-71 T 23-10-2018 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 Gene3D G3DSA:3.30.450.20 40 252 2.4E-48 T 23-10-2018 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 Gene3D G3DSA:3.30.450.20 50 155 2.4E-48 T 23-10-2018 DLM_1838 7c1982a5aac4bf7636766a349731a265 610 SUPERFAMILY SSF103190 99 149 3.37E-8 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_1838 7c1982a5aac4bf7636766a349731a265 610 Gene3D G3DSA:1.10.287.950 279 610 2.9E-72 T 23-10-2018 DLM_3408 d5299ac111c6145bfbb60eaf2f046374 193 SUPERFAMILY SSF53178 4 189 6.41E-70 T 23-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DLM_3408 d5299ac111c6145bfbb60eaf2f046374 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 23-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DLM_3408 d5299ac111c6145bfbb60eaf2f046374 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 5.5E-65 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DLM_3408 d5299ac111c6145bfbb60eaf2f046374 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 4.4E-56 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DLM_3408 d5299ac111c6145bfbb60eaf2f046374 193 Gene3D G3DSA:3.40.50.1470 1 193 2.2E-72 T 23-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DLM_3408 d5299ac111c6145bfbb60eaf2f046374 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 36.274 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DLM_3408 d5299ac111c6145bfbb60eaf2f046374 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 23-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DLM_1960 bce8e7aa0cf1fa177f6c3336f3987635 376 Gene3D G3DSA:3.40.630.10 1 284 7.8E-71 T 23-10-2018 DLM_1960 bce8e7aa0cf1fa177f6c3336f3987635 376 SUPERFAMILY SSF53187 11 367 8.8E-38 T 23-10-2018 DLM_1960 bce8e7aa0cf1fa177f6c3336f3987635 376 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 35 363 4.2E-24 T 23-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DLM_3349 6c2d3ac61837bbaad1168bd701f3e835 264 Gene3D G3DSA:3.30.1240.10 82 185 1.7E-60 T 23-10-2018 DLM_3349 6c2d3ac61837bbaad1168bd701f3e835 264 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 228 1.6E-26 T 23-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DLM_3349 6c2d3ac61837bbaad1168bd701f3e835 264 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 256 1.7E-48 T 23-10-2018 IPR000150 Cof family GO:0016787 DLM_3349 6c2d3ac61837bbaad1168bd701f3e835 264 SUPERFAMILY SSF56784 2 262 5.89E-64 T 23-10-2018 IPR036412 HAD-like superfamily DLM_3349 6c2d3ac61837bbaad1168bd701f3e835 264 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 23-10-2018 DLM_3349 6c2d3ac61837bbaad1168bd701f3e835 264 Gene3D G3DSA:3.40.50.1000 5 254 1.7E-60 T 23-10-2018 IPR023214 HAD superfamily DLM_3349 6c2d3ac61837bbaad1168bd701f3e835 264 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 255 1.8E-54 T 23-10-2018 DLM_1950 51213cb735de9756946a68dfbf0a377f 368 Gene3D G3DSA:2.40.50.140 247 288 1.9E-6 T 23-10-2018 DLM_1950 51213cb735de9756946a68dfbf0a377f 368 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1950 51213cb735de9756946a68dfbf0a377f 368 Pfam PF00005 ABC transporter 28 169 3.2E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1950 51213cb735de9756946a68dfbf0a377f 368 SUPERFAMILY SSF52540 10 251 9.28E-88 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1950 51213cb735de9756946a68dfbf0a377f 368 Gene3D G3DSA:3.40.50.300 4 246 3.7E-78 T 23-10-2018 DLM_1950 51213cb735de9756946a68dfbf0a377f 368 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 359 1.4E-118 T 23-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DLM_1950 51213cb735de9756946a68dfbf0a377f 368 SUPERFAMILY SSF50331 244 361 1.87E-19 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_1950 51213cb735de9756946a68dfbf0a377f 368 Pfam PF08402 TOBE domain 286 361 2.9E-15 T 23-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DLM_1950 51213cb735de9756946a68dfbf0a377f 368 SMART SM00382 36 219 4.0E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1950 51213cb735de9756946a68dfbf0a377f 368 Gene3D G3DSA:2.40.50.100 289 326 1.9E-6 T 23-10-2018 DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 SMART SM00448 183 308 4.0E-10 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 Pfam PF01584 CheW-like domain 25 164 2.7E-37 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 SMART SM00260 21 162 2.6E-30 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 SUPERFAMILY SSF50341 21 164 6.67E-32 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 Gene3D G3DSA:2.30.30.40 28 156 8.7E-31 T 23-10-2018 DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 SUPERFAMILY SSF52172 185 313 4.41E-21 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 Gene3D G3DSA:3.40.50.2300 181 314 3.7E-22 T 23-10-2018 DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 Pfam PF00072 Response regulator receiver domain 186 302 1.6E-13 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 PIRSF PIRSF002867 5 314 1.7E-101 T 23-10-2018 IPR024181 Chemotaxis response regulator CheV DLM_2896 88f39bcf03ef7e2ab5d922beaad7382c 314 Gene3D G3DSA:2.40.50.180 43 162 8.7E-31 T 23-10-2018 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 Pfam PF00375 Sodium:dicarboxylate symporter family 11 404 9.6E-107 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 23-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 7.3E-26 T 23-10-2018 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 7.3E-26 T 23-10-2018 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 7.3E-26 T 23-10-2018 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 7.3E-26 T 23-10-2018 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 7.3E-26 T 23-10-2018 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 4 431 37.064 T 23-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 Gene3D G3DSA:1.10.3860.10 2 420 1.8E-121 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 SUPERFAMILY SSF118215 11 405 3.53E-118 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DLM_3344 61cfa98d75125faed3e968c1c163f5da 436 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 23-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DLM_1395 4169dbcfb1eb774187d931d857b8b4a7 233 SMART SM00382 35 223 3.6E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1395 4169dbcfb1eb774187d931d857b8b4a7 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1395 4169dbcfb1eb774187d931d857b8b4a7 233 SUPERFAMILY SSF52540 6 226 1.49E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1395 4169dbcfb1eb774187d931d857b8b4a7 233 Gene3D G3DSA:3.40.50.300 4 232 2.2E-69 T 23-10-2018 DLM_1395 4169dbcfb1eb774187d931d857b8b4a7 233 Pfam PF00005 ABC transporter 27 174 6.7E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0147 13066ca5100ed93915178f8a3d2f5295 442 Gene3D G3DSA:2.40.40.10 59 436 6.1E-157 T 23-10-2018 IPR036908 RlpA-like domain superfamily DLM_0147 13066ca5100ed93915178f8a3d2f5295 442 Pfam PF06725 3D domain 357 429 1.1E-25 T 23-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DLM_0147 13066ca5100ed93915178f8a3d2f5295 442 PIRSF PIRSF019422 22 204 1.4E-20 T 23-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A DLM_0147 13066ca5100ed93915178f8a3d2f5295 442 PIRSF PIRSF019422 198 441 2.8E-98 T 23-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A DLM_0147 13066ca5100ed93915178f8a3d2f5295 442 SUPERFAMILY SSF50685 36 437 1.46E-130 T 23-10-2018 IPR036908 RlpA-like domain superfamily DLM_0147 13066ca5100ed93915178f8a3d2f5295 442 SMART SM00925 140 335 1.3E-80 T 23-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DLM_0147 13066ca5100ed93915178f8a3d2f5295 442 Pfam PF03562 MltA specific insert domain 67 335 6.6E-80 T 23-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DLM_0147 13066ca5100ed93915178f8a3d2f5295 442 Gene3D G3DSA:2.40.240.50 139 337 6.1E-157 T 23-10-2018 DLM_1360 a302b373d55367c66f3e9a36037d1203 342 Hamap MF_00813 Probable allantoicase [alc]. 6 341 45.925 T 23-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_1360 a302b373d55367c66f3e9a36037d1203 342 Gene3D G3DSA:2.60.120.260 179 342 3.5E-55 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily DLM_1360 a302b373d55367c66f3e9a36037d1203 342 Gene3D G3DSA:2.60.120.260 12 178 1.5E-57 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily DLM_1360 a302b373d55367c66f3e9a36037d1203 342 SUPERFAMILY SSF49785 186 340 1.15E-52 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily DLM_1360 a302b373d55367c66f3e9a36037d1203 342 SUPERFAMILY SSF49785 18 177 5.95E-57 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily DLM_1360 a302b373d55367c66f3e9a36037d1203 342 Pfam PF03561 Allantoicase repeat 29 175 1.2E-45 T 23-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_1360 a302b373d55367c66f3e9a36037d1203 342 Pfam PF03561 Allantoicase repeat 198 338 2.0E-44 T 23-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_1360 a302b373d55367c66f3e9a36037d1203 342 TIGRFAM TIGR02961 allantoicase: allantoicase 19 339 1.5E-135 T 23-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_1360 a302b373d55367c66f3e9a36037d1203 342 PIRSF PIRSF016516 5 342 2.7E-137 T 23-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DLM_4109 c7f4ba473c2447bf35597c31f2d3b0b1 405 SUPERFAMILY SSF56349 100 383 7.65E-64 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DLM_4109 c7f4ba473c2447bf35597c31f2d3b0b1 405 Gene3D G3DSA:1.10.443.10 206 392 1.7E-19 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DLM_4109 c7f4ba473c2447bf35597c31f2d3b0b1 405 Pfam PF13356 Arm DNA-binding domain 8 93 5.0E-20 T 23-10-2018 IPR025166 Integrase, DNA-binding domain DLM_4109 c7f4ba473c2447bf35597c31f2d3b0b1 405 Gene3D G3DSA:1.10.150.130 95 205 1.8E-28 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal DLM_4109 c7f4ba473c2447bf35597c31f2d3b0b1 405 Gene3D G3DSA:3.30.160.390 6 93 2.6E-27 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DLM_4109 c7f4ba473c2447bf35597c31f2d3b0b1 405 Pfam PF00589 Phage integrase family 208 372 8.0E-21 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DLM_0051 fb7ea443df8ebd96b7c1b6747f36b271 198 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 9 169 35.021 T 23-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0051 fb7ea443df8ebd96b7c1b6747f36b271 198 Gene3D G3DSA:3.30.460.80 1 141 3.6E-43 T 23-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0051 fb7ea443df8ebd96b7c1b6747f36b271 198 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 122 143 - T 23-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0051 fb7ea443df8ebd96b7c1b6747f36b271 198 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 162 1.1E-45 T 23-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0051 fb7ea443df8ebd96b7c1b6747f36b271 198 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 88 149 3.0E-22 T 23-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0051 fb7ea443df8ebd96b7c1b6747f36b271 198 SUPERFAMILY SSF143243 12 182 8.37E-57 T 23-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0051 fb7ea443df8ebd96b7c1b6747f36b271 198 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 160 5.9E-43 T 23-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0987 146ea344f2628b3c596a0d7177c96b6a 431 SMART SM01011 2 131 2.0E-62 T 23-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 DLM_0987 146ea344f2628b3c596a0d7177c96b6a 431 Pfam PF05195 Aminopeptidase P, N-terminal domain 5 120 6.5E-37 T 23-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 DLM_0987 146ea344f2628b3c596a0d7177c96b6a 431 SUPERFAMILY SSF55920 171 428 3.79E-84 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like DLM_0987 146ea344f2628b3c596a0d7177c96b6a 431 Gene3D G3DSA:3.90.230.10 167 430 2.9E-95 T 23-10-2018 DLM_0987 146ea344f2628b3c596a0d7177c96b6a 431 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 343 355 - T 23-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DLM_0987 146ea344f2628b3c596a0d7177c96b6a 431 Pfam PF00557 Metallopeptidase family M24 177 407 4.6E-64 T 23-10-2018 IPR000994 Peptidase M24 DLM_0987 146ea344f2628b3c596a0d7177c96b6a 431 Gene3D G3DSA:3.40.350.10 2 166 1.8E-50 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DLM_0987 146ea344f2628b3c596a0d7177c96b6a 431 SUPERFAMILY SSF53092 3 169 2.2E-53 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DLM_2562 3f068f8762c643f46607cc5f0200199c 448 Pfam PF04996 Succinylarginine dihydrolase 3 446 4.6E-221 T 23-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 DLM_2562 3f068f8762c643f46607cc5f0200199c 448 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 59.615 T 23-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 DLM_2562 3f068f8762c643f46607cc5f0200199c 448 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 446 6.3E-245 T 23-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 DLM_2562 3f068f8762c643f46607cc5f0200199c 448 SUPERFAMILY SSF55909 3 446 2.16E-204 T 23-10-2018 DLM_2562 3f068f8762c643f46607cc5f0200199c 448 Gene3D G3DSA:3.75.10.20 1 448 1.1E-206 T 23-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 DLM_1896 88d8fd7b5b98d82088da0c867acc7bb7 89 SUPERFAMILY SSF47413 20 88 6.22E-21 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_1896 88d8fd7b5b98d82088da0c867acc7bb7 89 Pfam PF13744 Helix-turn-helix domain 17 89 3.5E-25 T 23-10-2018 IPR039554 HigA2-like, helix-turn-helix domain DLM_1896 88d8fd7b5b98d82088da0c867acc7bb7 89 Gene3D G3DSA:1.10.260.40 13 89 3.7E-27 T 23-10-2018 DLM_1896 88d8fd7b5b98d82088da0c867acc7bb7 89 SMART SM00530 25 89 3.1E-9 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2290 ba0d8876842cc89e60e51a0d5521a831 467 Gene3D G3DSA:3.40.50.1010 7 161 2.9E-24 T 23-10-2018 DLM_2290 ba0d8876842cc89e60e51a0d5521a831 467 SMART SM00670 11 146 1.9E-12 T 23-10-2018 IPR002716 PIN domain DLM_2290 ba0d8876842cc89e60e51a0d5521a831 467 Pfam PF02562 PhoH-like protein 254 458 1.5E-53 T 23-10-2018 IPR003714 PhoH-like protein GO:0005524 DLM_2290 ba0d8876842cc89e60e51a0d5521a831 467 Pfam PF13638 PIN domain 13 158 1.6E-39 T 23-10-2018 IPR002716 PIN domain DLM_2290 ba0d8876842cc89e60e51a0d5521a831 467 SUPERFAMILY SSF52540 125 447 9.41E-30 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2290 ba0d8876842cc89e60e51a0d5521a831 467 Gene3D G3DSA:3.40.50.300 252 466 4.6E-66 T 23-10-2018 DLM_2290 ba0d8876842cc89e60e51a0d5521a831 467 SUPERFAMILY SSF88723 12 163 2.11E-12 T 23-10-2018 IPR029060 PIN-like domain superfamily DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 Pfam PF01706 FliG C-terminal domain 216 321 1.1E-43 T 23-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 PIRSF PIRSF003161 2 331 3.2E-115 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 SUPERFAMILY SSF48029 3 112 8.11E-20 T 23-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 5 328 2.2E-107 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 Pfam PF14842 FliG N-terminal domain 5 101 6.4E-25 T 23-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 SUPERFAMILY SSF48029 111 322 1.18E-67 T 23-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 Gene3D G3DSA:1.10.220.30 192 331 1.6E-47 T 23-10-2018 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 Gene3D G3DSA:1.10.220.30 85 187 7.3E-27 T 23-10-2018 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 111 134 4.5E-62 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 4.5E-62 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 4.5E-62 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 269 295 4.5E-62 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 4.5E-62 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 192 217 4.5E-62 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 223 243 4.5E-62 T 23-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 Gene3D G3DSA:1.10.220.30 3 81 1.9E-15 T 23-10-2018 DLM_0970 68c50fd37999a27eb3ab0a61df8af2ee 332 Pfam PF14841 FliG middle domain 113 183 7.4E-24 T 23-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain DLM_1845 7d96a1fb0bea34130acbe70a29247aff 384 SMART SM00897 28 220 0.005 T 23-10-2018 IPR013702 FIST domain, N-terminal DLM_1845 7d96a1fb0bea34130acbe70a29247aff 384 Pfam PF08495 FIST N domain 45 219 6.8E-14 T 23-10-2018 IPR013702 FIST domain, N-terminal DLM_1845 7d96a1fb0bea34130acbe70a29247aff 384 SMART SM01204 221 363 3.4E-20 T 23-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DLM_1845 7d96a1fb0bea34130acbe70a29247aff 384 Pfam PF10442 FIST C domain 221 361 2.8E-16 T 23-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DLM_0343 ad4e276ccf15a5a2eb74f6e29ce7dfdf 654 SUPERFAMILY SSF53098 259 455 2.66E-23 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0343 ad4e276ccf15a5a2eb74f6e29ce7dfdf 654 Pfam PF00665 Integrase core domain 263 397 4.2E-18 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_0343 ad4e276ccf15a5a2eb74f6e29ce7dfdf 654 Pfam PF09299 Mu transposase, C-terminal 475 534 1.4E-5 T 23-10-2018 IPR015378 Transposase-like, Mu, C-terminal DLM_0343 ad4e276ccf15a5a2eb74f6e29ce7dfdf 654 Gene3D G3DSA:3.30.420.10 258 469 8.3E-31 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 Gene3D G3DSA:1.20.120.530 87 226 6.6E-24 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 SUPERFAMILY SSF48008 88 220 3.4E-24 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.6E-8 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.6E-8 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 SUPERFAMILY SSF46785 4 75 4.86E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 SMART SM00895 91 215 1.5E-16 T 23-10-2018 IPR011711 GntR, C-terminal DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 Gene3D G3DSA:1.10.10.10 8 79 2.7E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 Pfam PF07729 FCD domain 93 211 5.4E-22 T 23-10-2018 IPR011711 GntR, C-terminal DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 71 6.2E-16 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3173 0261c7da9a4dd04137c9bd90134509e9 241 SMART SM00345 12 71 3.5E-16 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0100 8d554a1dbf2feab38e67fa0e8e2c651f 110 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 98 9.0E-36 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DLM_0100 8d554a1dbf2feab38e67fa0e8e2c651f 110 SUPERFAMILY SSF75471 4 97 1.28E-26 T 23-10-2018 IPR035920 YhbY-like superfamily DLM_0100 8d554a1dbf2feab38e67fa0e8e2c651f 110 Gene3D G3DSA:3.30.110.60 3 105 1.2E-31 T 23-10-2018 IPR035920 YhbY-like superfamily DLM_0100 8d554a1dbf2feab38e67fa0e8e2c651f 110 SMART SM01103 5 88 1.9E-36 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DLM_0100 8d554a1dbf2feab38e67fa0e8e2c651f 110 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 2.3E-17 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 90 5.0E-35 T 23-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 Gene3D G3DSA:1.20.5.440 91 133 1.3E-10 T 23-10-2018 DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 8.9E-9 T 23-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 132 7.3E-41 T 23-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 Gene3D G3DSA:2.60.15.10 3 90 3.1E-28 T 23-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 131 21.635 T 23-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 SUPERFAMILY SSF46604 88 137 4.97E-11 T 23-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 84 5.2E-27 T 23-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3659 df93a9e3188548b3bd1e842fa48521cc 140 SUPERFAMILY SSF51344 3 86 6.67E-23 T 23-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3357 2faebf4c8160fe54e4593be35ca94d0a 106 Pfam PF01037 Lrp/AsnC ligand binding domain 18 91 4.4E-23 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_3357 2faebf4c8160fe54e4593be35ca94d0a 106 SUPERFAMILY SSF54909 11 100 1.34E-22 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_3357 2faebf4c8160fe54e4593be35ca94d0a 106 Gene3D G3DSA:3.30.70.920 4 88 4.1E-29 T 23-10-2018 DLM_1686 e409e19501b002021fc000fddcc17067 393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 390 8.5E-40 T 23-10-2018 IPR000160 GGDEF domain DLM_1686 e409e19501b002021fc000fddcc17067 393 SUPERFAMILY SSF55073 239 393 5.81E-41 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_1686 e409e19501b002021fc000fddcc17067 393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 391 3.8E-44 T 23-10-2018 IPR000160 GGDEF domain DLM_1686 e409e19501b002021fc000fddcc17067 393 SMART SM00267 223 393 3.4E-46 T 23-10-2018 IPR000160 GGDEF domain DLM_1686 e409e19501b002021fc000fddcc17067 393 Gene3D G3DSA:3.30.70.270 220 393 2.9E-46 T 23-10-2018 DLM_4534 272a8bb136fde0704a76cf4a23975d72 487 Gene3D G3DSA:3.90.1300.10 7 481 1.1E-124 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_4534 272a8bb136fde0704a76cf4a23975d72 487 Pfam PF01425 Amidase 32 461 2.8E-80 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_4534 272a8bb136fde0704a76cf4a23975d72 487 SUPERFAMILY SSF75304 10 476 7.33E-120 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_2309 b3a7a7c8f02a2229280db78a2833ba0c 88 PIRSF PIRSF003113 3 88 2.8E-26 T 23-10-2018 IPR002634 BolA protein DLM_2309 b3a7a7c8f02a2229280db78a2833ba0c 88 Gene3D G3DSA:3.30.300.90 4 88 5.1E-27 T 23-10-2018 DLM_2309 b3a7a7c8f02a2229280db78a2833ba0c 88 Pfam PF01722 BolA-like protein 13 87 3.4E-29 T 23-10-2018 IPR002634 BolA protein DLM_2309 b3a7a7c8f02a2229280db78a2833ba0c 88 SUPERFAMILY SSF82657 9 87 8.37E-25 T 23-10-2018 IPR036065 BolA-like superfamily DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 SUPERFAMILY SSF54913 1 112 1.21E-45 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 Gene3D G3DSA:3.30.70.120 1 112 1.0E-46 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.9E-43 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 PRINTS PR00340 P-II protein signature 2 17 5.1E-45 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 PRINTS PR00340 P-II protein signature 52 75 5.1E-45 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 PRINTS PR00340 P-II protein signature 83 103 5.1E-45 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 PRINTS PR00340 P-II protein signature 23 41 5.1E-45 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 PIRSF PIRSF039144 1 112 4.2E-56 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_1878 3ac49601800bfed9f70e909a7bfb025d 112 SMART SM00938 4 105 1.3E-66 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_4280 4819f3f14023019ebef8208284f5d679 376 SUPERFAMILY SSF51246 306 374 3.45E-17 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DLM_4280 4819f3f14023019ebef8208284f5d679 376 Gene3D G3DSA:3.30.470.20 183 376 6.6E-73 T 23-10-2018 DLM_4280 4819f3f14023019ebef8208284f5d679 376 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 365 2.0E-118 T 23-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DLM_4280 4819f3f14023019ebef8208284f5d679 376 Gene3D G3DSA:3.40.50.20 2 114 3.9E-40 T 23-10-2018 DLM_4280 4819f3f14023019ebef8208284f5d679 376 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 362 40.823 T 23-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DLM_4280 4819f3f14023019ebef8208284f5d679 376 Pfam PF02222 ATP-grasp domain 114 282 1.8E-49 T 23-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DLM_4280 4819f3f14023019ebef8208284f5d679 376 SUPERFAMILY SSF52440 9 102 9.21E-27 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_4280 4819f3f14023019ebef8208284f5d679 376 Gene3D G3DSA:3.30.1490.20 115 182 5.6E-21 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_4280 4819f3f14023019ebef8208284f5d679 376 SUPERFAMILY SSF56059 105 300 2.05E-55 T 23-10-2018 DLM_0988 3c453aadd3ca0053861c3add68c9ff41 398 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 21 394 1.1E-92 T 23-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DLM_0988 3c453aadd3ca0053861c3add68c9ff41 398 Gene3D G3DSA:3.30.9.50 90 279 1.3E-78 T 23-10-2018 DLM_0988 3c453aadd3ca0053861c3add68c9ff41 398 SUPERFAMILY SSF51905 19 395 3.3E-47 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0988 3c453aadd3ca0053861c3add68c9ff41 398 Gene3D G3DSA:3.50.50.60 21 344 1.3E-78 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0988 3c453aadd3ca0053861c3add68c9ff41 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 1.8E-14 T 23-10-2018 DLM_0988 3c453aadd3ca0053861c3add68c9ff41 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 21 43 1.8E-14 T 23-10-2018 DLM_0988 3c453aadd3ca0053861c3add68c9ff41 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 1.8E-14 T 23-10-2018 DLM_0988 3c453aadd3ca0053861c3add68c9ff41 398 Pfam PF01494 FAD binding domain 20 354 5.6E-29 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 DLM_0929 92d45341f9071dda1539da702c34e23c 337 SUPERFAMILY SSF53474 36 307 7.21E-28 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0929 92d45341f9071dda1539da702c34e23c 337 Pfam PF12146 Serine aminopeptidase, S33 75 289 1.9E-8 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 DLM_0929 92d45341f9071dda1539da702c34e23c 337 Gene3D G3DSA:3.40.50.1820 30 296 8.5E-31 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1661 f960e890eacd0193c5cfd4058b3ee795 339 Gene3D G3DSA:1.20.58.340 152 277 2.3E-19 T 23-10-2018 DLM_1661 f960e890eacd0193c5cfd4058b3ee795 339 Pfam PF01544 CorA-like Mg2+ transporter protein 48 331 2.5E-52 T 23-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DLM_1661 f960e890eacd0193c5cfd4058b3ee795 339 Gene3D G3DSA:3.30.460.20 8 148 7.1E-26 T 23-10-2018 DLM_1661 f960e890eacd0193c5cfd4058b3ee795 339 Gene3D G3DSA:1.20.58.340 281 337 5.2E-14 T 23-10-2018 DLM_1661 f960e890eacd0193c5cfd4058b3ee795 339 SUPERFAMILY SSF143865 16 271 4.05E-35 T 23-10-2018 DLM_1661 f960e890eacd0193c5cfd4058b3ee795 339 SUPERFAMILY SSF144083 273 333 2.48E-15 T 23-10-2018 DLM_1822 812ff96ad1335f9184140b2befd84b34 155 SUPERFAMILY SSF54637 17 142 4.11E-25 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_1822 812ff96ad1335f9184140b2befd84b34 155 Gene3D G3DSA:3.10.129.10 6 148 5.6E-51 T 23-10-2018 DLM_1822 812ff96ad1335f9184140b2befd84b34 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 118 5.5E-13 T 23-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DLM_1822 812ff96ad1335f9184140b2befd84b34 155 Pfam PF03061 Thioesterase superfamily 56 129 5.4E-10 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 127 163 5.2E-5 T 23-10-2018 IPR006530 YD repeat DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 24 45 5.5E-4 T 23-10-2018 IPR006530 YD repeat DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 107 144 0.0022 T 23-10-2018 IPR006530 YD repeat DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 30 68 2.0E-6 T 23-10-2018 IPR006530 YD repeat DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 Gene3D G3DSA:2.180.10.10 61 345 3.9E-44 T 23-10-2018 DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 Pfam PF03527 RHS protein 237 272 1.3E-13 T 23-10-2018 IPR001826 RHS protein DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 Pfam PF05593 RHS Repeat 7 41 2.3E-6 T 23-10-2018 IPR031325 RHS repeat DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 Pfam PF05593 RHS Repeat 127 156 3.8E-5 T 23-10-2018 IPR031325 RHS repeat DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 PRINTS PR00394 RHS protein signature 231 251 5.8E-8 T 23-10-2018 IPR001826 RHS protein DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 PRINTS PR00394 RHS protein signature 313 332 5.8E-8 T 23-10-2018 IPR001826 RHS protein DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 264 345 9.7E-29 T 23-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 Pfam PF14414 A nuclease of the HNH/ENDO VII superfamily with conserved WHH 394 441 1.6E-11 T 23-10-2018 IPR032869 WHH domain-containing protein DLM_2639 15fa1da47cc7b422cb0404e7bfc757b1 465 SUPERFAMILY SSF69304 26 182 2.09E-5 T 23-10-2018 DLM_1808 97b53f621a7a0a3e159042336f87b846 166 Pfam PF14539 Domain of unknown function (DUF4442) 24 160 2.0E-36 T 23-10-2018 IPR027961 Protein of unknown function DUF4442 DLM_1808 97b53f621a7a0a3e159042336f87b846 166 Gene3D G3DSA:3.10.129.10 11 162 1.4E-39 T 23-10-2018 DLM_1808 97b53f621a7a0a3e159042336f87b846 166 SUPERFAMILY SSF54637 25 163 4.11E-22 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_4058 16151d9788e9fda53c3f793d05aed159 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 84 3.0E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4058 16151d9788e9fda53c3f793d05aed159 317 SUPERFAMILY SSF53850 112 312 1.01E-28 T 23-10-2018 DLM_4058 16151d9788e9fda53c3f793d05aed159 317 SUPERFAMILY SSF46785 23 125 5.45E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4058 16151d9788e9fda53c3f793d05aed159 317 Gene3D G3DSA:3.40.190.10 190 287 6.8E-19 T 23-10-2018 DLM_4058 16151d9788e9fda53c3f793d05aed159 317 Pfam PF03466 LysR substrate binding domain 112 312 8.3E-29 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_4058 16151d9788e9fda53c3f793d05aed159 317 Gene3D G3DSA:3.40.190.10 114 299 6.8E-19 T 23-10-2018 DLM_4058 16151d9788e9fda53c3f793d05aed159 317 Gene3D G3DSA:1.10.10.10 23 113 7.7E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 Gene3D G3DSA:3.40.190.10 83 276 5.6E-54 T 23-10-2018 DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 SUPERFAMILY SSF53850 83 276 3.26E-38 T 23-10-2018 DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 SUPERFAMILY SSF46785 1 82 6.9E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 9.6E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 9.6E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 9.6E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 Gene3D G3DSA:3.40.190.10 157 262 5.6E-54 T 23-10-2018 DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 Gene3D G3DSA:1.10.10.10 1 79 5.4E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 Pfam PF03466 LysR substrate binding domain 82 273 4.1E-40 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3568 6a377649ce67ade4c41127cd0cb52900 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 3.4E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 SUPERFAMILY SSF54909 73 158 9.52E-20 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 Gene3D G3DSA:1.10.10.10 2 62 7.3E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 SMART SM00344 11 120 1.8E-49 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 1.9E-19 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 1.9E-19 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 1.9E-19 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 4.8E-20 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 1.0E-19 T 23-10-2018 DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 SUPERFAMILY SSF46785 10 70 4.66E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 Gene3D G3DSA:3.30.70.920 63 157 2.9E-23 T 23-10-2018 DLM_2652 7e29ec0989d9502a545fb9b36a9c9148 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 23-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DLM_1763 03fecf0a9bb8b1230acbfa3fc605a986 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 376 3.3E-91 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_1763 03fecf0a9bb8b1230acbfa3fc605a986 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 294 9.1E-13 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_1763 03fecf0a9bb8b1230acbfa3fc605a986 387 Gene3D G3DSA:2.40.50.100 65 209 3.7E-110 T 23-10-2018 DLM_1763 03fecf0a9bb8b1230acbfa3fc605a986 387 Pfam PF00529 HlyD membrane-fusion protein of T1SS 295 361 5.0E-7 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_1763 03fecf0a9bb8b1230acbfa3fc605a986 387 SUPERFAMILY SSF111369 54 301 2.09E-82 T 23-10-2018 DLM_1763 03fecf0a9bb8b1230acbfa3fc605a986 387 Gene3D G3DSA:2.40.30.170 54 304 3.7E-110 T 23-10-2018 DLM_1763 03fecf0a9bb8b1230acbfa3fc605a986 387 Gene3D G3DSA:1.10.287.470 100 173 3.7E-110 T 23-10-2018 DLM_1763 03fecf0a9bb8b1230acbfa3fc605a986 387 Gene3D G3DSA:2.40.420.20 305 374 3.7E-110 T 23-10-2018 DLM_4078 79764f08f4bb9aab71ca565c1da93b5d 252 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 199 1.2E-45 T 23-10-2018 IPR001303 Class II aldolase/adducin N-terminal DLM_4078 79764f08f4bb9aab71ca565c1da93b5d 252 Gene3D G3DSA:3.40.225.10 4 252 2.7E-73 T 23-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DLM_4078 79764f08f4bb9aab71ca565c1da93b5d 252 SUPERFAMILY SSF53639 11 218 2.16E-60 T 23-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DLM_4078 79764f08f4bb9aab71ca565c1da93b5d 252 SMART SM01007 16 199 3.9E-61 T 23-10-2018 IPR001303 Class II aldolase/adducin N-terminal DLM_2441 2973c5f6d7dd75d4eb64b2b0fdb5c9a2 226 PRINTS PR01008 Flagellar L-ring protein signature 187 201 8.1E-18 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_2441 2973c5f6d7dd75d4eb64b2b0fdb5c9a2 226 PRINTS PR01008 Flagellar L-ring protein signature 166 182 8.1E-18 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_2441 2973c5f6d7dd75d4eb64b2b0fdb5c9a2 226 PRINTS PR01008 Flagellar L-ring protein signature 140 155 8.1E-18 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_2441 2973c5f6d7dd75d4eb64b2b0fdb5c9a2 226 PRINTS PR01008 Flagellar L-ring protein signature 64 76 8.1E-18 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_2441 2973c5f6d7dd75d4eb64b2b0fdb5c9a2 226 Hamap MF_00415 Flagellar L-ring protein [flgH]. 3 224 22.937 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_2441 2973c5f6d7dd75d4eb64b2b0fdb5c9a2 226 Pfam PF02107 Flagellar L-ring protein 42 225 1.2E-51 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_3402 133ee1fc4cd4985815b5d3c063ba7a70 1014 Gene3D G3DSA:3.40.50.300 281 455 8.6E-25 T 23-10-2018 DLM_3402 133ee1fc4cd4985815b5d3c063ba7a70 1014 Gene3D G3DSA:3.40.50.300 518 752 9.3E-21 T 23-10-2018 DLM_3402 133ee1fc4cd4985815b5d3c063ba7a70 1014 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 112 203 1.9E-10 T 23-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 DLM_3402 133ee1fc4cd4985815b5d3c063ba7a70 1014 SUPERFAMILY SSF52540 280 541 2.71E-21 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3402 133ee1fc4cd4985815b5d3c063ba7a70 1014 Gene3D G3DSA:3.90.1570.50 103 263 1.7E-6 T 23-10-2018 DLM_3402 133ee1fc4cd4985815b5d3c063ba7a70 1014 SMART SM00487 277 518 9.8E-10 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_3402 133ee1fc4cd4985815b5d3c063ba7a70 1014 Pfam PF04851 Type III restriction enzyme, res subunit 281 447 4.8E-11 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DLM_0190 2e1b9f0f7caab579e2ad4153b5ed5ff4 330 Pfam PF03186 CobD/Cbib protein 32 308 1.4E-32 T 23-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DLM_0190 2e1b9f0f7caab579e2ad4153b5ed5ff4 330 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 330 56.243 T 23-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DLM_1512 09b664739749d97b3e7e7fab6e1c9912 325 Gene3D G3DSA:1.10.10.60 222 325 8.9E-30 T 23-10-2018 DLM_1512 09b664739749d97b3e7e7fab6e1c9912 325 SUPERFAMILY SSF46689 273 323 1.57E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1512 09b664739749d97b3e7e7fab6e1c9912 325 Gene3D G3DSA:3.40.50.880 2 208 1.4E-43 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1512 09b664739749d97b3e7e7fab6e1c9912 325 SMART SM00342 237 320 2.5E-26 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1512 09b664739749d97b3e7e7fab6e1c9912 325 Pfam PF12833 Helix-turn-helix domain 243 322 2.1E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1512 09b664739749d97b3e7e7fab6e1c9912 325 SUPERFAMILY SSF52317 1 202 9.16E-32 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1512 09b664739749d97b3e7e7fab6e1c9912 325 SUPERFAMILY SSF46689 220 272 2.6E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2625 438b7587de74550e18a4951bb0ca996e 174 Pfam PF05593 RHS Repeat 93 121 7.5E-5 T 23-10-2018 IPR031325 RHS repeat DLM_2625 438b7587de74550e18a4951bb0ca996e 174 Pfam PF05593 RHS Repeat 73 107 1.1E-4 T 23-10-2018 IPR031325 RHS repeat DLM_2625 438b7587de74550e18a4951bb0ca996e 174 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 73 112 9.5E-5 T 23-10-2018 IPR006530 YD repeat DLM_2625 438b7587de74550e18a4951bb0ca996e 174 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 93 129 5.2E-5 T 23-10-2018 IPR006530 YD repeat DLM_2625 438b7587de74550e18a4951bb0ca996e 174 Gene3D G3DSA:2.180.10.10 12 139 7.9E-9 T 23-10-2018 DLM_1869 6e7c0b0f53fff4cfdd8686916dee8620 322 Pfam PF03466 LysR substrate binding domain 100 309 1.1E-38 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1869 6e7c0b0f53fff4cfdd8686916dee8620 322 Gene3D G3DSA:1.10.10.10 15 103 1.1E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1869 6e7c0b0f53fff4cfdd8686916dee8620 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 9.5E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1869 6e7c0b0f53fff4cfdd8686916dee8620 322 Gene3D G3DSA:3.40.190.10 104 305 2.8E-49 T 23-10-2018 DLM_1869 6e7c0b0f53fff4cfdd8686916dee8620 322 Gene3D G3DSA:3.40.190.10 178 280 2.8E-49 T 23-10-2018 DLM_1869 6e7c0b0f53fff4cfdd8686916dee8620 322 SUPERFAMILY SSF53850 101 312 7.42E-40 T 23-10-2018 DLM_1869 6e7c0b0f53fff4cfdd8686916dee8620 322 SUPERFAMILY SSF46785 15 101 7.18E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2360 2f3ef0de4a17d7c37995462da078c6e5 497 SUPERFAMILY SSF53720 3 483 3.27E-148 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_2360 2f3ef0de4a17d7c37995462da078c6e5 497 Gene3D G3DSA:3.40.309.10 248 450 6.8E-155 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_2360 2f3ef0de4a17d7c37995462da078c6e5 497 Pfam PF00171 Aldehyde dehydrogenase family 16 477 2.4E-138 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_2360 2f3ef0de4a17d7c37995462da078c6e5 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_2360 2f3ef0de4a17d7c37995462da078c6e5 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 1.5E-209 T 23-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DLM_2360 2f3ef0de4a17d7c37995462da078c6e5 497 Gene3D G3DSA:3.40.605.10 22 458 6.8E-155 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0843 539980482236e73f257e617af83791c1 761 PIRSF PIRSF036684 1 759 0.0 T 23-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 DLM_0843 539980482236e73f257e617af83791c1 761 SUPERFAMILY SSF53659 430 754 2.51E-86 T 23-10-2018 DLM_0843 539980482236e73f257e617af83791c1 761 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 23-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DLM_0843 539980482236e73f257e617af83791c1 761 SUPERFAMILY SSF53223 10 161 3.31E-53 T 23-10-2018 DLM_0843 539980482236e73f257e617af83791c1 761 SMART SM01274 18 151 2.6E-79 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DLM_0843 539980482236e73f257e617af83791c1 761 Gene3D G3DSA:3.40.50.10950 447 751 3.2E-90 T 23-10-2018 DLM_0843 539980482236e73f257e617af83791c1 761 Gene3D G3DSA:3.40.50.10380 1 160 9.4E-69 T 23-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DLM_0843 539980482236e73f257e617af83791c1 761 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.2E-18 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DLM_0843 539980482236e73f257e617af83791c1 761 Gene3D G3DSA:3.40.50.720 161 446 1.1E-80 T 23-10-2018 DLM_0843 539980482236e73f257e617af83791c1 761 SMART SM00919 163 401 1.1E-139 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DLM_0843 539980482236e73f257e617af83791c1 761 Pfam PF00390 Malic enzyme, N-terminal domain 19 150 8.5E-28 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DLM_0843 539980482236e73f257e617af83791c1 761 Gene3D G3DSA:3.40.50.10750 573 727 3.2E-90 T 23-10-2018 DLM_0843 539980482236e73f257e617af83791c1 761 SUPERFAMILY SSF51735 163 453 2.59E-86 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0843 539980482236e73f257e617af83791c1 761 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 7.1E-95 T 23-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 Pfam PF00271 Helicase conserved C-terminal domain 287 404 5.2E-12 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 SMART SM00490 305 405 1.1E-14 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 SUPERFAMILY SSF52540 81 563 3.33E-100 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 Pfam PF11898 Domain of unknown function (DUF3418) 731 1308 1.0E-208 T 23-10-2018 IPR024590 RNA helicase HrpA, C-terminal DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 SMART SM00847 465 555 1.1E-33 T 23-10-2018 IPR007502 Helicase-associated domain GO:0004386 DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 Gene3D G3DSA:3.40.50.300 25 252 4.8E-75 T 23-10-2018 DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 Pfam PF04408 Helicase associated domain (HA2) 468 552 2.1E-16 T 23-10-2018 IPR007502 Helicase-associated domain GO:0004386 DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 640 717 3.0E-18 T 23-10-2018 IPR011709 Domain of unknown function DUF1605 DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 SMART SM00487 79 259 1.7E-26 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 Gene3D G3DSA:3.40.50.300 253 422 6.1E-58 T 23-10-2018 DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 SMART SM00382 92 371 1.6E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 Gene3D G3DSA:1.20.120.1080 450 553 7.6E-18 T 23-10-2018 DLM_1454 f40c675e10927113a567f66a0bfaa7d3 1313 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 12 1308 0.0 T 23-10-2018 IPR010222 RNA helicase HrpA GO:0004004 DLM_1103 4c70c4cf4b2db33a104a7e889f4dff72 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 51 126 2.2E-17 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DLM_1103 4c70c4cf4b2db33a104a7e889f4dff72 136 SUPERFAMILY SSF54534 50 127 7.46E-17 T 23-10-2018 DLM_1103 4c70c4cf4b2db33a104a7e889f4dff72 136 Pfam PF14760 Rnk N-terminus 5 45 3.2E-12 T 23-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain DLM_1103 4c70c4cf4b2db33a104a7e889f4dff72 136 Gene3D G3DSA:1.10.286.20 1 45 6.0E-9 T 23-10-2018 DLM_1103 4c70c4cf4b2db33a104a7e889f4dff72 136 Gene3D G3DSA:3.10.50.30 46 136 2.8E-28 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DLM_1103 4c70c4cf4b2db33a104a7e889f4dff72 136 PIRSF PIRSF006092 12 128 2.4E-25 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DLM_1683 de47efc3638d17d9c5cb227e95677289 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 1.2E-16 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1683 de47efc3638d17d9c5cb227e95677289 206 SUPERFAMILY SSF46689 14 81 5.2E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1683 de47efc3638d17d9c5cb227e95677289 206 Gene3D G3DSA:1.10.10.60 9 62 8.4E-16 T 23-10-2018 DLM_1683 de47efc3638d17d9c5cb227e95677289 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.0E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1683 de47efc3638d17d9c5cb227e95677289 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.0E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1683 de47efc3638d17d9c5cb227e95677289 206 SUPERFAMILY SSF48498 92 201 4.05E-6 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_1683 de47efc3638d17d9c5cb227e95677289 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DLM_1683 de47efc3638d17d9c5cb227e95677289 206 Gene3D G3DSA:1.10.357.10 63 201 1.6E-11 T 23-10-2018 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 7.3E-21 T 23-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 3.5E-254 T 23-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 SUPERFAMILY SSF52540 75 352 2.66E-89 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 SUPERFAMILY SSF50615 1 73 7.32E-26 T 23-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 Gene3D G3DSA:2.40.10.170 1 73 1.1E-30 T 23-10-2018 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 Gene3D G3DSA:1.10.1140.10 349 464 2.5E-59 T 23-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.5E-61 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 57.174 T 23-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 23-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 SUPERFAMILY SSF47917 349 463 4.71E-54 T 23-10-2018 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 Gene3D G3DSA:3.40.50.300 74 348 1.8E-110 T 23-10-2018 DLM_3660 2bbc9d27e8ab00b49d977ab44b6aa43c 464 SMART SM00382 140 331 6.5E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 SUPERFAMILY SSF101801 248 322 5.89E-14 T 23-10-2018 IPR036429 SpoA-like superfamily DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 Pfam PF02154 Flagellar motor switch protein FliM 37 229 3.6E-73 T 23-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 318 1.5E-108 T 23-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 Gene3D G3DSA:3.40.1550.10 43 231 7.5E-58 T 23-10-2018 IPR028976 CheC-like superfamily DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 PIRSF PIRSF002888 2 324 8.4E-97 T 23-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.1E-26 T 23-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.1E-26 T 23-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 1.1E-26 T 23-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 1.1E-26 T 23-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 319 7.7E-19 T 23-10-2018 IPR001543 Surface presentation of antigen (SpoA) DLM_0979 51908f87dfcf52dd89d24ff95b33c633 334 SUPERFAMILY SSF103039 6 229 6.02E-20 T 23-10-2018 IPR028976 CheC-like superfamily DLM_0442 f44f8872660372104c7dc7028cba85b8 234 Pfam PF01895 PhoU domain 125 210 1.7E-13 T 23-10-2018 IPR026022 PhoU domain DLM_0442 f44f8872660372104c7dc7028cba85b8 234 Pfam PF01895 PhoU domain 21 106 4.4E-18 T 23-10-2018 IPR026022 PhoU domain DLM_0442 f44f8872660372104c7dc7028cba85b8 234 Gene3D G3DSA:1.20.58.220 1 116 5.2E-38 T 23-10-2018 IPR038078 PhoU-like domain superfamily DLM_0442 f44f8872660372104c7dc7028cba85b8 234 PIRSF PIRSF003107 2 224 3.1E-62 T 23-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DLM_0442 f44f8872660372104c7dc7028cba85b8 234 Gene3D G3DSA:1.20.58.220 117 232 9.6E-32 T 23-10-2018 IPR038078 PhoU-like domain superfamily DLM_0442 f44f8872660372104c7dc7028cba85b8 234 SUPERFAMILY SSF109755 7 228 3.98E-66 T 23-10-2018 DLM_0442 f44f8872660372104c7dc7028cba85b8 234 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 219 2.1E-64 T 23-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.657 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 PRINTS PR00073 Coprogen oxidase signature 31 47 8.4E-87 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 PRINTS PR00073 Coprogen oxidase signature 48 69 8.4E-87 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 PRINTS PR00073 Coprogen oxidase signature 262 288 8.4E-87 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 PRINTS PR00073 Coprogen oxidase signature 90 114 8.4E-87 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 PRINTS PR00073 Coprogen oxidase signature 162 191 8.4E-87 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 PRINTS PR00073 Coprogen oxidase signature 125 147 8.4E-87 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 PRINTS PR00073 Coprogen oxidase signature 234 261 8.4E-87 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 2.2E-133 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 SUPERFAMILY SSF102886 3 302 1.44E-140 T 23-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 23-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 Gene3D G3DSA:3.40.1500.10 1 302 2.2E-139 T 23-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_3616 3ea816257308d653614ac5f50ad46afc 302 PIRSF PIRSF000166 1 302 1.7E-129 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DLM_1636 15c2edde022598b84d5c8cf719262dc0 291 Gene3D G3DSA:2.60.200.30 128 263 6.9E-92 T 23-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DLM_1636 15c2edde022598b84d5c8cf719262dc0 291 Gene3D G3DSA:3.40.50.10330 24 286 6.9E-92 T 23-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DLM_1636 15c2edde022598b84d5c8cf719262dc0 291 Pfam PF01513 ATP-NAD kinase 60 268 1.0E-58 T 23-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DLM_1636 15c2edde022598b84d5c8cf719262dc0 291 Hamap MF_00361 NAD kinase [nadK]. 6 286 33.294 T 23-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DLM_1636 15c2edde022598b84d5c8cf719262dc0 291 SUPERFAMILY SSF111331 7 289 3.01E-88 T 23-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DLM_4127 28704d0203bad0589aea6ef6f97506ad 338 Pfam PF06580 Histidine kinase 139 217 4.3E-20 T 23-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DLM_4127 28704d0203bad0589aea6ef6f97506ad 338 SUPERFAMILY SSF55874 196 274 1.67E-7 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4127 28704d0203bad0589aea6ef6f97506ad 338 Gene3D G3DSA:3.30.565.10 192 325 5.9E-10 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1561 5903d4e402f91eea5486cc2c2dc8f8f9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.1E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1561 5903d4e402f91eea5486cc2c2dc8f8f9 301 SUPERFAMILY SSF46785 6 88 1.06E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1561 5903d4e402f91eea5486cc2c2dc8f8f9 301 Gene3D G3DSA:3.40.190.10 95 292 1.1E-56 T 23-10-2018 DLM_1561 5903d4e402f91eea5486cc2c2dc8f8f9 301 SUPERFAMILY SSF53850 93 298 3.44E-36 T 23-10-2018 DLM_1561 5903d4e402f91eea5486cc2c2dc8f8f9 301 Pfam PF03466 LysR substrate binding domain 92 295 3.8E-35 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1561 5903d4e402f91eea5486cc2c2dc8f8f9 301 Gene3D G3DSA:3.40.190.10 166 266 1.1E-56 T 23-10-2018 DLM_1561 5903d4e402f91eea5486cc2c2dc8f8f9 301 Gene3D G3DSA:1.10.10.10 6 93 5.3E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1715 292dec93493e981ac2fbdf203a85f324 312 PIRSF PIRSF000446 1 303 5.3E-57 T 23-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DLM_1715 292dec93493e981ac2fbdf203a85f324 312 SUPERFAMILY SSF52151 3 284 5.93E-47 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DLM_1715 292dec93493e981ac2fbdf203a85f324 312 Gene3D G3DSA:3.40.366.10 5 279 3.6E-64 T 23-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 DLM_1715 292dec93493e981ac2fbdf203a85f324 312 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 299 2.0E-98 T 23-10-2018 IPR017554 Malonate decarboxylase, McdH subunit DLM_1715 292dec93493e981ac2fbdf203a85f324 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 295 7.4E-18 T 23-10-2018 IPR020801 Polyketide synthase, acyl transferase domain DLM_1715 292dec93493e981ac2fbdf203a85f324 312 SUPERFAMILY SSF55048 122 191 1.7E-10 T 23-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DLM_1715 292dec93493e981ac2fbdf203a85f324 312 Gene3D G3DSA:3.30.70.250 119 191 3.6E-64 T 23-10-2018 DLM_1715 292dec93493e981ac2fbdf203a85f324 312 Pfam PF00698 Acyl transferase domain 5 284 4.3E-26 T 23-10-2018 IPR014043 Acyl transferase DLM_0397 af0395392d500d9f6846dd6a239498a8 226 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 2 188 2.4E-40 T 23-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 DLM_0397 af0395392d500d9f6846dd6a239498a8 226 Pfam PF02361 Cobalt transport protein 3 192 2.2E-38 T 23-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DLM_4060 b614f19520cac4efe21c0fff4e3fb89f 455 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 390 410 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site DLM_4060 b614f19520cac4efe21c0fff4e3fb89f 455 Gene3D G3DSA:1.20.1730.10 19 455 1.7E-71 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily DLM_4060 b614f19520cac4efe21c0fff4e3fb89f 455 Pfam PF00474 Sodium:solute symporter family 32 408 5.6E-36 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DLM_2238 060d6b068430a5b98f85e864aaac7971 327 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 299 2.3E-85 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DLM_2238 060d6b068430a5b98f85e864aaac7971 327 SUPERFAMILY SSF50891 181 306 5.69E-11 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily DLM_2238 060d6b068430a5b98f85e864aaac7971 327 Gene3D G3DSA:2.40.100.10 179 326 3.8E-43 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily DLM_2238 060d6b068430a5b98f85e864aaac7971 327 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 324 9.0E-85 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DLM_2238 060d6b068430a5b98f85e864aaac7971 327 SMART SM00797 24 316 2.4E-126 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DLM_1314 9b762ffdd4e0a427fbf63fddb60abeac 376 SUPERFAMILY SSF51905 7 351 1.22E-59 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1314 9b762ffdd4e0a427fbf63fddb60abeac 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 3.5E-18 T 23-10-2018 DLM_1314 9b762ffdd4e0a427fbf63fddb60abeac 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.5E-18 T 23-10-2018 DLM_1314 9b762ffdd4e0a427fbf63fddb60abeac 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 3.5E-18 T 23-10-2018 DLM_1314 9b762ffdd4e0a427fbf63fddb60abeac 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 3.5E-18 T 23-10-2018 DLM_1314 9b762ffdd4e0a427fbf63fddb60abeac 376 Pfam PF01494 FAD binding domain 8 344 2.9E-27 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 DLM_1314 9b762ffdd4e0a427fbf63fddb60abeac 376 Gene3D G3DSA:3.50.50.60 9 345 7.4E-79 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1314 9b762ffdd4e0a427fbf63fddb60abeac 376 Gene3D G3DSA:3.30.9.30 40 274 7.4E-79 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:2.40.50.100 1024 1128 1.3E-29 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 5.2E-29 T 23-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.4E-86 T 23-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 485 3.8E-35 T 23-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.3E-19 T 23-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1383 18.928 T 23-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 SMART SM00663 235 514 1.1E-179 T 23-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:2.40.50.100 1153 1216 4.6E-67 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:3.90.105.10 835 884 9.7E-8 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:2.40.50.100 948 1023 7.6E-27 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 SUPERFAMILY SSF64484 16 1366 0.0 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1019 0.0 T 23-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:1.10.150.390 1317 1375 2.6E-28 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:1.10.1790.20 1137 1315 4.6E-67 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1317 2.3E-77 T 23-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:1.10.40.90 374 416 8.7E-21 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:1.10.274.100 490 640 9.0E-40 T 23-10-2018 DLM_4385 0ea7da4668de0f081d13b102a3bfb4be 1396 Gene3D G3DSA:1.10.132.30 641 790 7.7E-66 T 23-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_3805 82d96c5918c67db415861a3e4f41292d 344 Gene3D G3DSA:3.40.50.10210 51 323 2.2E-125 T 23-10-2018 DLM_3805 82d96c5918c67db415861a3e4f41292d 344 Gene3D G3DSA:1.10.1610.10 19 340 2.2E-125 T 23-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DLM_3805 82d96c5918c67db415861a3e4f41292d 344 Pfam PF02277 Phosphoribosyltransferase 10 340 1.4E-127 T 23-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DLM_3805 82d96c5918c67db415861a3e4f41292d 344 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 7 342 35.546 T 23-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DLM_3805 82d96c5918c67db415861a3e4f41292d 344 SUPERFAMILY SSF52733 7 341 1.44E-110 T 23-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DLM_3805 82d96c5918c67db415861a3e4f41292d 344 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 12 340 7.7E-129 T 23-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DLM_4251 57637265886c71ac46c46e46b5ff3b5c 333 Gene3D G3DSA:2.60.40.1090 192 333 2.8E-31 T 23-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 DLM_4251 57637265886c71ac46c46e46b5ff3b5c 333 SUPERFAMILY SSF49401 194 333 2.73E-24 T 23-10-2018 IPR008966 Adhesion domain superfamily DLM_4251 57637265886c71ac46c46e46b5ff3b5c 333 Pfam PF00419 Fimbrial protein 183 333 3.2E-17 T 23-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 DLM_4022 96ae1d5f483eae075beda6fcebfffd2b 345 Gene3D G3DSA:3.40.50.300 101 345 1.3E-101 T 23-10-2018 DLM_4022 96ae1d5f483eae075beda6fcebfffd2b 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-10-2018 IPR001482 Type II/IV secretion system protein DLM_4022 96ae1d5f483eae075beda6fcebfffd2b 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.8E-155 T 23-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 DLM_4022 96ae1d5f483eae075beda6fcebfffd2b 345 Pfam PF00437 Type II/IV secretion system protein 12 268 5.8E-46 T 23-10-2018 IPR001482 Type II/IV secretion system protein DLM_4022 96ae1d5f483eae075beda6fcebfffd2b 345 SUPERFAMILY SSF52540 5 336 8.21E-76 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4022 96ae1d5f483eae075beda6fcebfffd2b 345 Gene3D G3DSA:3.30.450.90 1 100 2.9E-37 T 23-10-2018 DLM_4022 96ae1d5f483eae075beda6fcebfffd2b 345 SMART SM00382 122 256 0.0018 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 282 303 1.4E-6 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 83 103 1.4E-6 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 Gene3D G3DSA:2.40.30.170 60 291 4.4E-63 T 23-10-2018 DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 365 3.3E-61 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 Gene3D G3DSA:2.40.420.20 50 350 4.4E-63 T 23-10-2018 DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 285 3.4E-30 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 SUPERFAMILY SSF111369 61 286 6.54E-23 T 23-10-2018 DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 Gene3D G3DSA:1.10.287.470 106 178 4.4E-63 T 23-10-2018 DLM_0148 6d598502fd9c570592b1f198a4fcce3e 371 Gene3D G3DSA:2.40.50.100 72 212 4.4E-63 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 107 146 3.9E-17 T 23-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Gene3D G3DSA:3.10.20.740 25 147 1.4E-38 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 244 295 4.2E-15 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3239 7689a8251354e40fd46970f11eacffad 956 SUPERFAMILY SSF54292 26 98 5.29E-18 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Gene3D G3DSA:2.20.25.90 244 296 2.4E-16 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 SUPERFAMILY SSF50692 783 925 3.84E-40 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DLM_3239 7689a8251354e40fd46970f11eacffad 956 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 173 184 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_3239 7689a8251354e40fd46970f11eacffad 956 SMART SM00926 243 297 1.1E-15 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3239 7689a8251354e40fd46970f11eacffad 956 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 216 227 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_3239 7689a8251354e40fd46970f11eacffad 956 SUPERFAMILY SSF54862 99 237 3.89E-37 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 24 100 1.5E-22 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Gene3D G3DSA:3.40.50.740 305 774 1.1E-176 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 853 880 - T 23-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Gene3D G3DSA:2.40.40.20 812 926 4.3E-34 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 SMART SM00929 107 147 4.4E-19 T 23-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Gene3D G3DSA:3.30.70.20 152 234 2.9E-23 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 SUPERFAMILY SSF53706 243 778 2.09E-194 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 PIRSF PIRSF036643 22 956 0.0 T 23-10-2018 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Pfam PF01568 Molydopterin dinucleotide binding domain 815 919 3.8E-28 T 23-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DLM_3239 7689a8251354e40fd46970f11eacffad 956 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 248 923 2.4E-280 T 23-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Pfam PF00384 Molybdopterin oxidoreductase 300 731 5.2E-78 T 23-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3239 7689a8251354e40fd46970f11eacffad 956 Gene3D G3DSA:3.40.228.10 380 587 1.1E-176 T 23-10-2018 DLM_3308 0f0e84976fe6349814051b0d5d276bec 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 112.587 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DLM_3308 0f0e84976fe6349814051b0d5d276bec 255 Gene3D G3DSA:3.40.1280.10 1 165 1.4E-63 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DLM_3308 0f0e84976fe6349814051b0d5d276bec 255 SUPERFAMILY SSF75217 1 251 7.19E-100 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases DLM_3308 0f0e84976fe6349814051b0d5d276bec 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 3.8E-64 T 23-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DLM_3308 0f0e84976fe6349814051b0d5d276bec 255 Gene3D G3DSA:1.10.1270.20 166 254 4.3E-34 T 23-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DLM_3308 0f0e84976fe6349814051b0d5d276bec 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 1.3E-94 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DLM_3308 0f0e84976fe6349814051b0d5d276bec 255 PIRSF PIRSF000386 1 255 3.7E-96 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DLM_3512 3761522abd0abeb15b51ab066aebb968 294 Pfam PF01926 50S ribosome-binding GTPase 48 164 1.8E-15 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3512 3761522abd0abeb15b51ab066aebb968 294 SUPERFAMILY SSF52540 30 244 4.15E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3512 3761522abd0abeb15b51ab066aebb968 294 Gene3D G3DSA:3.40.50.300 42 242 2.1E-34 T 23-10-2018 DLM_1359 c80559e50d0a1017f1d2cdef5b0a997e 165 Pfam PF04115 Ureidoglycolate lyase 5 162 1.1E-52 T 23-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DLM_1359 c80559e50d0a1017f1d2cdef5b0a997e 165 PIRSF PIRSF017306 5 163 1.4E-38 T 23-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DLM_1359 c80559e50d0a1017f1d2cdef5b0a997e 165 Gene3D G3DSA:2.60.120.480 5 165 6.6E-57 T 23-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DLM_1359 c80559e50d0a1017f1d2cdef5b0a997e 165 SUPERFAMILY SSF51182 6 162 5.21E-57 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_4190 bf87f31304bbf30e3f4d8422baa51901 583 Gene3D G3DSA:3.40.710.10 295 475 2.7E-103 T 23-10-2018 DLM_4190 bf87f31304bbf30e3f4d8422baa51901 583 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 22 569 41.913 T 23-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_4190 bf87f31304bbf30e3f4d8422baa51901 583 Gene3D G3DSA:3.30.450.330 236 555 2.7E-103 T 23-10-2018 DLM_4190 bf87f31304bbf30e3f4d8422baa51901 583 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 218 1.8E-18 T 23-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DLM_4190 bf87f31304bbf30e3f4d8422baa51901 583 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 552 7.0E-70 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DLM_4190 bf87f31304bbf30e3f4d8422baa51901 583 SUPERFAMILY SSF56601 236 562 4.1E-83 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DLM_4190 bf87f31304bbf30e3f4d8422baa51901 583 SUPERFAMILY SSF56519 66 233 4.45E-44 T 23-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DLM_4190 bf87f31304bbf30e3f4d8422baa51901 583 Gene3D G3DSA:3.90.1310.30 63 233 1.2E-46 T 23-10-2018 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 Gene3D G3DSA:3.30.413.10 119 317 3.0E-78 T 23-10-2018 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 SUPERFAMILY SSF55124 1 125 2.78E-29 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 273 1.5E-41 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 SUPERFAMILY SSF55124 252 421 6.54E-24 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 SUPERFAMILY SSF56014 120 285 1.05E-47 T 23-10-2018 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 SUPERFAMILY SSF56014 409 549 8.11E-41 T 23-10-2018 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 Gene3D G3DSA:3.90.480.10 53 391 3.0E-78 T 23-10-2018 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 Gene3D G3DSA:3.30.413.10 408 552 5.3E-33 T 23-10-2018 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 453 547 8.3E-13 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 111 3.3E-16 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_3064 3f972c1bee3d3d22ab0e3fe1f2f24fcd 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 328 397 8.8E-16 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 SUPERFAMILY SSF47203 225 378 9.02E-59 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.8E-29 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 Gene3D G3DSA:1.10.540.10 1 118 5.2E-36 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 Gene3D G3DSA:2.40.110.10 121 231 2.1E-43 T 23-10-2018 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.9E-47 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.1E-26 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 Gene3D G3DSA:1.20.140.10 232 382 4.8E-54 T 23-10-2018 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 SUPERFAMILY SSF56645 1 240 2.23E-82 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 PIRSF PIRSF016578 208 384 1.1E-14 T 23-10-2018 DLM_2550 f4f65340fabf0ee56a4164c97530b731 386 PIRSF PIRSF016578 5 192 8.7E-11 T 23-10-2018 DLM_2526 e85119cc8d20757cda4f4adce5a179f6 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 604 1.4E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2526 e85119cc8d20757cda4f4adce5a179f6 638 Gene3D G3DSA:1.10.287.950 318 638 4.7E-68 T 23-10-2018 DLM_2526 e85119cc8d20757cda4f4adce5a179f6 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 501 1.1E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2526 e85119cc8d20757cda4f4adce5a179f6 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 1.1E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2526 e85119cc8d20757cda4f4adce5a179f6 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 1.1E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2526 e85119cc8d20757cda4f4adce5a179f6 638 SMART SM00283 376 637 1.1E-61 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2526 e85119cc8d20757cda4f4adce5a179f6 638 SUPERFAMILY SSF58104 342 638 1.31E-65 T 23-10-2018 DLM_3100 1700b5993b41b7c89562bf625284643c 345 Gene3D G3DSA:3.90.650.10 171 345 1.2E-68 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_3100 1700b5993b41b7c89562bf625284643c 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 334 2.6E-141 T 23-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3100 1700b5993b41b7c89562bf625284643c 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 6 344 47.064 T 23-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3100 1700b5993b41b7c89562bf625284643c 345 Gene3D G3DSA:3.30.1330.10 5 169 9.8E-70 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_3100 1700b5993b41b7c89562bf625284643c 345 SUPERFAMILY SSF56042 171 340 1.18E-60 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_3100 1700b5993b41b7c89562bf625284643c 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 338 5.5E-35 T 23-10-2018 IPR010918 PurM-like, C-terminal domain DLM_3100 1700b5993b41b7c89562bf625284643c 345 SUPERFAMILY SSF55326 6 169 1.17E-53 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_3100 1700b5993b41b7c89562bf625284643c 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 56 163 2.5E-16 T 23-10-2018 IPR016188 PurM-like, N-terminal domain DLM_4449 b71eb6894240afd98f35ea561399fe72 365 Gene3D G3DSA:3.90.1150.10 247 364 2.3E-37 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_4449 b71eb6894240afd98f35ea561399fe72 365 Gene3D G3DSA:3.40.640.10 1 243 5.8E-94 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_4449 b71eb6894240afd98f35ea561399fe72 365 SUPERFAMILY SSF53383 11 364 1.32E-113 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4449 b71eb6894240afd98f35ea561399fe72 365 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 360 3.1E-122 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_4449 b71eb6894240afd98f35ea561399fe72 365 PIRSF PIRSF000390 1 365 3.2E-105 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 PIRSF PIRSF000535 4 317 9.5E-83 T 23-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 6 315 1.3E-92 T 23-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 6 315 6.0E-93 T 23-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 Pfam PF00294 pfkB family carbohydrate kinase 19 299 2.8E-43 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 Gene3D G3DSA:3.40.1190.20 3 317 2.3E-91 T 23-10-2018 IPR029056 Ribokinase-like DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 SUPERFAMILY SSF53613 6 309 4.13E-61 T 23-10-2018 IPR029056 Ribokinase-like DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 PRINTS PR00990 Ribokinase signature 225 236 2.4E-5 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 PRINTS PR00990 Ribokinase signature 34 53 2.4E-5 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DLM_2819 56d4aa493b10ab6671987bb19032a29b 318 PRINTS PR00990 Ribokinase signature 181 196 2.4E-5 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 Gene3D G3DSA:3.30.450.20 204 327 3.2E-22 T 23-10-2018 DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 SMART SM00304 352 404 8.7E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 SMART SM00304 439 506 21.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 SMART SM00283 419 680 4.8E-73 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 SUPERFAMILY SSF58104 372 681 2.09E-74 T 23-10-2018 DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 Pfam PF17201 Cache 3/Cache 2 fusion domain 44 328 7.4E-80 T 23-10-2018 IPR033462 Cache 3/Cache 2 fusion domain DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 Pfam PF00672 HAMP domain 353 400 7.3E-8 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 SUPERFAMILY SSF103190 120 213 2.12E-8 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 646 1.8E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1752 a76dcd061e5ace74750e1ca7dcb85a77 681 Gene3D G3DSA:1.10.287.950 352 681 1.8E-73 T 23-10-2018 DLM_1034 d681992d3925d1d56f350f00f81dcc2c 38 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 19 36 3.4E-7 T 23-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 DLM_1034 d681992d3925d1d56f350f00f81dcc2c 38 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 16 38 5.3E-9 T 23-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 DLM_4532 6c10d915c3a3bb951f0dd88f94262a4a 312 Gene3D G3DSA:1.10.1580.10 175 266 3.3E-24 T 23-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily DLM_4532 6c10d915c3a3bb951f0dd88f94262a4a 312 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 273 9.4E-100 T 23-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis DLM_4532 6c10d915c3a3bb951f0dd88f94262a4a 312 Gene3D G3DSA:3.40.50.300 3 171 7.0E-41 T 23-10-2018 DLM_4532 6c10d915c3a3bb951f0dd88f94262a4a 312 Pfam PF01926 50S ribosome-binding GTPase 116 175 3.4E-15 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_4532 6c10d915c3a3bb951f0dd88f94262a4a 312 PIRSF PIRSF006230 1 278 1.5E-95 T 23-10-2018 IPR016478 GTPase, MTG1 DLM_4532 6c10d915c3a3bb951f0dd88f94262a4a 312 SUPERFAMILY SSF52540 9 247 1.24E-40 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1318 ae14a63161c53e433793e8ffc1a65121 327 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 84 323 2.6E-36 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DLM_1318 ae14a63161c53e433793e8ffc1a65121 327 Gene3D G3DSA:3.90.850.10 1 326 7.9E-117 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_1318 ae14a63161c53e433793e8ffc1a65121 327 SUPERFAMILY SSF56529 78 326 2.49E-57 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_3866 631d16553ab9760bcadf5598b8568fc9 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 8.3E-9 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_3866 631d16553ab9760bcadf5598b8568fc9 324 SUPERFAMILY SSF50129 3 144 1.04E-36 T 23-10-2018 IPR011032 GroES-like superfamily DLM_3866 631d16553ab9760bcadf5598b8568fc9 324 Pfam PF00107 Zinc-binding dehydrogenase 151 256 6.2E-31 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_3866 631d16553ab9760bcadf5598b8568fc9 324 Gene3D G3DSA:3.90.180.10 12 318 3.9E-116 T 23-10-2018 DLM_3866 631d16553ab9760bcadf5598b8568fc9 324 Gene3D G3DSA:3.40.50.720 123 268 3.9E-116 T 23-10-2018 DLM_3866 631d16553ab9760bcadf5598b8568fc9 324 SMART SM00829 11 322 7.8E-36 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DLM_3866 631d16553ab9760bcadf5598b8568fc9 324 SUPERFAMILY SSF51735 112 265 4.5E-48 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 5.0E-31 T 23-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 5.0E-31 T 23-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 5.0E-31 T 23-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 5.0E-31 T 23-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 5.0E-31 T 23-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 346 2.0E-115 T 23-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 Gene3D G3DSA:3.40.1690.10 217 356 5.5E-52 T 23-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 351 4.3E-118 T 23-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 DLM_0326 c40d016ed06adf188108e46407fa2cf9 388 SUPERFAMILY SSF160544 244 350 1.44E-34 T 23-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 Pfam PF10135 Rod binding protein 58 103 5.4E-12 T 23-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 PRINTS PR01002 Flagellar protein FlgJ signature 209 230 1.3E-37 T 23-10-2018 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 PRINTS PR01002 Flagellar protein FlgJ signature 36 59 1.3E-37 T 23-10-2018 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 PRINTS PR01002 Flagellar protein FlgJ signature 253 274 1.3E-37 T 23-10-2018 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 PRINTS PR01002 Flagellar protein FlgJ signature 165 188 1.3E-37 T 23-10-2018 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 PRINTS PR01002 Flagellar protein FlgJ signature 231 252 1.3E-37 T 23-10-2018 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 PRINTS PR01002 Flagellar protein FlgJ signature 189 207 1.3E-37 T 23-10-2018 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 PRINTS PR01002 Flagellar protein FlgJ signature 296 314 1.3E-37 T 23-10-2018 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 SMART SM00047 160 314 6.1E-33 T 23-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 Gene3D G3DSA:1.10.530.10 170 309 1.6E-45 T 23-10-2018 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 SUPERFAMILY SSF53955 105 207 5.25E-5 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 20 313 9.6E-108 T 23-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 176 313 2.5E-20 T 23-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DLM_2439 8c84c3fd0f6c3f14dd21fd1d860544bf 320 Gene3D G3DSA:2.10.70.40 204 256 1.6E-45 T 23-10-2018 DLM_4079 48fddeac6a4fb46b80261af4aaf54c62 96 Pfam PF12773 Double zinc ribbon 48 92 3.1E-11 T 23-10-2018 IPR025874 Double zinc ribbon DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 SUPERFAMILY SSF55874 217 393 8.38E-30 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 Pfam PF00512 His Kinase A (phospho-acceptor) domain 163 227 2.7E-15 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 Gene3D G3DSA:1.20.120.160 518 620 3.0E-6 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 SMART SM00387 275 390 4.1E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 Gene3D G3DSA:3.30.565.10 233 396 5.2E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 SMART SM00388 163 228 4.1E-19 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 1.5E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 1.5E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 387 1.5E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 SUPERFAMILY SSF47226 510 597 3.01E-7 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 276 389 1.8E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 Gene3D G3DSA:1.10.287.130 142 226 4.6E-25 T 23-10-2018 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 SUPERFAMILY SSF47384 148 227 7.46E-19 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 Gene3D G3DSA:3.30.450.20 33 141 2.0E-8 T 23-10-2018 DLM_1243 99ab932c4466ecf5983113c5e0043d47 625 SUPERFAMILY SSF55785 19 140 9.95E-10 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2785 694b0f32a989feaa5ef7ae791dfe68bd 412 Pfam PF13378 Enolase C-terminal domain-like 151 363 4.8E-45 T 23-10-2018 IPR029065 Enolase C-terminal domain-like DLM_2785 694b0f32a989feaa5ef7ae791dfe68bd 412 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 6 121 3.1E-8 T 23-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DLM_2785 694b0f32a989feaa5ef7ae791dfe68bd 412 Gene3D G3DSA:3.30.390.10 3 373 2.1E-109 T 23-10-2018 IPR029017 Enolase-like, N-terminal DLM_2785 694b0f32a989feaa5ef7ae791dfe68bd 412 SMART SM00922 149 244 2.7E-16 T 23-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DLM_2785 694b0f32a989feaa5ef7ae791dfe68bd 412 Gene3D G3DSA:3.20.20.120 122 360 2.1E-109 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_2785 694b0f32a989feaa5ef7ae791dfe68bd 412 SUPERFAMILY SSF51604 121 374 3.67E-61 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_2785 694b0f32a989feaa5ef7ae791dfe68bd 412 SUPERFAMILY SSF54826 1 121 1.03E-20 T 23-10-2018 DLM_2662 747d644e0361af35370976b660fb5984 222 Pfam PF02498 BRO family, N-terminal domain 32 104 9.9E-6 T 23-10-2018 IPR003497 BRO N-terminal domain DLM_0371 6b50a896dad35b0a46c6393efc4dd0e1 336 SUPERFAMILY SSF53448 23 200 3.03E-37 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_0371 6b50a896dad35b0a46c6393efc4dd0e1 336 Gene3D G3DSA:3.90.550.10 14 225 8.6E-39 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_0371 6b50a896dad35b0a46c6393efc4dd0e1 336 Pfam PF00535 Glycosyl transferase family 2 29 189 2.0E-26 T 23-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DLM_2227 bb72a31d83e7a56e2f5fcb7be439d68d 430 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 172 3.6E-10 T 23-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DLM_2227 bb72a31d83e7a56e2f5fcb7be439d68d 430 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 239 420 6.8E-33 T 23-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DLM_2227 bb72a31d83e7a56e2f5fcb7be439d68d 430 SUPERFAMILY SSF52540 8 194 4.68E-38 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2227 bb72a31d83e7a56e2f5fcb7be439d68d 430 SUPERFAMILY SSF52317 236 428 2.14E-31 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2227 bb72a31d83e7a56e2f5fcb7be439d68d 430 Gene3D G3DSA:3.40.50.880 246 413 2.0E-11 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2227 bb72a31d83e7a56e2f5fcb7be439d68d 430 Gene3D G3DSA:3.40.50.300 8 185 2.6E-17 T 23-10-2018 DLM_2227 bb72a31d83e7a56e2f5fcb7be439d68d 430 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 11 426 5.2E-79 T 23-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.7E-129 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 Pfam PF00108 Thiolase, N-terminal domain 5 268 3.3E-67 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 Pfam PF02803 Thiolase, C-terminal domain 277 400 6.6E-44 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 Gene3D G3DSA:3.40.47.10 6 282 2.4E-148 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 SUPERFAMILY SSF53901 3 276 1.54E-74 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 SUPERFAMILY SSF53901 278 400 3.04E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 PIRSF PIRSF000429 1 402 8.3E-126 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 3.8E-205 T 23-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 Gene3D G3DSA:3.40.47.10 141 398 2.4E-148 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3562 1f768d21eceacd0c95466f3f5cddc238 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 DLM_2157 1da022ec7c754b5866eefefa93b9e9a9 310 SUPERFAMILY SSF51556 29 305 5.32E-77 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_2157 1da022ec7c754b5866eefefa93b9e9a9 310 Gene3D G3DSA:3.20.20.140 14 309 4.0E-84 T 23-10-2018 DLM_2157 1da022ec7c754b5866eefefa93b9e9a9 310 Pfam PF04909 Amidohydrolase 34 305 1.8E-50 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 Pfam PF01926 50S ribosome-binding GTPase 222 334 3.3E-25 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 Gene3D G3DSA:1.20.120.430 125 450 1.3E-101 T 23-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 Pfam PF10396 GTP-binding protein TrmE N-terminus 9 123 3.8E-38 T 23-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 358 1.1E-23 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 450 1.2E-107 T 23-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 SUPERFAMILY SSF52540 76 371 4.04E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 Gene3D G3DSA:3.40.50.300 220 381 1.3E-101 T 23-10-2018 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 Gene3D G3DSA:3.30.1360.120 4 124 4.3E-43 T 23-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 Pfam PF12631 MnmE helical domain 126 447 2.4E-56 T 23-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DLM_4108 d959d9bc966a229fd8e0b4615c02d76a 450 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 8 450 32.352 T 23-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DLM_3891 84d626e113ef58a2ec3445059852b13d 462 SUPERFAMILY SSF53092 1 167 2.41E-27 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DLM_3891 84d626e113ef58a2ec3445059852b13d 462 Pfam PF00557 Metallopeptidase family M24 174 439 8.8E-53 T 23-10-2018 IPR000994 Peptidase M24 DLM_3891 84d626e113ef58a2ec3445059852b13d 462 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 116 1.2E-19 T 23-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 DLM_3891 84d626e113ef58a2ec3445059852b13d 462 SMART SM01011 2 134 1.1E-24 T 23-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 DLM_3891 84d626e113ef58a2ec3445059852b13d 462 Gene3D G3DSA:3.40.350.10 2 143 6.3E-15 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DLM_3891 84d626e113ef58a2ec3445059852b13d 462 Gene3D G3DSA:3.90.230.10 167 462 4.1E-91 T 23-10-2018 DLM_3891 84d626e113ef58a2ec3445059852b13d 462 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 339 351 - T 23-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DLM_3891 84d626e113ef58a2ec3445059852b13d 462 SUPERFAMILY SSF55920 168 460 3.4E-68 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like DLM_4421 b36c04dfc383912a88eab9069dd7e19b 506 Pfam PF00795 Carbon-nitrogen hydrolase 217 463 4.3E-30 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DLM_4421 b36c04dfc383912a88eab9069dd7e19b 506 SUPERFAMILY SSF56317 213 470 4.06E-37 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_4421 b36c04dfc383912a88eab9069dd7e19b 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 55 441 1.4E-89 T 23-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DLM_4421 b36c04dfc383912a88eab9069dd7e19b 506 Gene3D G3DSA:3.60.110.10 212 471 1.4E-14 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_4421 b36c04dfc383912a88eab9069dd7e19b 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 3 478 22.01 T 23-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DLM_2332 abba76c596dc89d85ebbe6238a68cd26 565 PIRSF PIRSF029745 6 565 1.4E-157 T 23-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 DLM_2332 abba76c596dc89d85ebbe6238a68cd26 565 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 213 529 5.0E-97 T 23-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal DLM_2332 abba76c596dc89d85ebbe6238a68cd26 565 Pfam PF17287 POTRA domain 155 208 4.0E-18 T 23-10-2018 IPR035251 ShlB, POTRA domain DLM_2332 abba76c596dc89d85ebbe6238a68cd26 565 Pfam PF08479 POTRA domain, ShlB-type 79 154 4.1E-20 T 23-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type DLM_2332 abba76c596dc89d85ebbe6238a68cd26 565 Gene3D G3DSA:3.10.20.310 66 154 2.1E-11 T 23-10-2018 DLM_2332 abba76c596dc89d85ebbe6238a68cd26 565 Gene3D G3DSA:2.40.160.50 186 564 1.6E-89 T 23-10-2018 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 Gene3D G3DSA:3.30.750.44 49 357 1.2E-93 T 23-10-2018 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 387 1.4E-103 T 23-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 SMART SM00245 174 382 2.9E-71 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 Pfam PF13180 PDZ domain 101 176 1.1E-14 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 Gene3D G3DSA:2.30.42.10 101 188 1.2E-93 T 23-10-2018 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 SUPERFAMILY SSF52096 38 386 3.64E-77 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 SUPERFAMILY SSF50156 95 184 8.78E-20 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 Gene3D G3DSA:3.90.226.10 189 379 1.2E-93 T 23-10-2018 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 SMART SM00228 101 172 2.1E-17 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_0234 0ea1d102ffeb9c2605adce1350d1b1ad 475 Pfam PF03572 Peptidase family S41 200 381 4.4E-55 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 Gene3D G3DSA:3.40.50.300 478 630 1.1E-10 T 23-10-2018 DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 Gene3D G3DSA:1.10.3210.30 1 227 2.0E-42 T 23-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 Pfam PF00271 Helicase conserved C-terminal domain 506 613 1.2E-5 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 Pfam PF00270 DEAD/DEAH box helicase 265 443 2.3E-6 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 266 618 6.1E-64 T 23-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 Gene3D G3DSA:3.40.50.300 246 453 1.3E-12 T 23-10-2018 DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 1 181 1.2E-23 T 23-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 SUPERFAMILY SSF52540 263 616 5.24E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2395 d5c5a1f3ca60554676c98184f27ecd32 861 SMART SM00490 525 614 0.0013 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_2221 26bfc79af69515c7f7edf02e980f0d63 243 PIRSF PIRSF036427 3 242 6.1E-65 T 23-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 DLM_2221 26bfc79af69515c7f7edf02e980f0d63 243 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 6 235 8.0E-72 T 23-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 DLM_2221 26bfc79af69515c7f7edf02e980f0d63 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 212 3.0E-42 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_2221 26bfc79af69515c7f7edf02e980f0d63 243 SUPERFAMILY SSF53790 4 237 1.44E-36 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_2221 26bfc79af69515c7f7edf02e980f0d63 243 Gene3D G3DSA:3.40.1010.10 2 132 8.2E-25 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_2221 26bfc79af69515c7f7edf02e980f0d63 243 Gene3D G3DSA:3.30.950.10 133 243 9.1E-19 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 SMART SM00316 620 692 1.2E-21 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 695 30.009 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 SUPERFAMILY SSF55666 145 235 4.49E-28 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 SUPERFAMILY SSF54791 555 635 1.18E-20 T 23-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 693 0.0 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Gene3D G3DSA:3.30.1370.10 551 621 2.7E-19 T 23-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 SUPERFAMILY SSF54211 2 144 1.27E-51 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 SUPERFAMILY SSF54211 294 489 7.09E-44 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 SUPERFAMILY SSF55666 451 545 4.63E-27 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 8.8E-19 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 4.9E-20 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 PIRSF PIRSF005499 1 714 1.2E-294 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Pfam PF03725 3' exoribonuclease family, domain 2 462 530 2.2E-4 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 4.4E-12 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 SMART SM00322 552 617 1.1E-11 T 23-10-2018 IPR004087 K Homology domain GO:0003676 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Gene3D G3DSA:2.40.50.140 622 695 1.3E-25 T 23-10-2018 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 SUPERFAMILY SSF50249 608 697 6.59E-21 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Gene3D G3DSA:3.30.230.70 233 550 3.1E-110 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Gene3D G3DSA:3.30.230.70 1 228 6.2E-82 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Pfam PF00575 S1 RNA binding domain 619 692 4.6E-14 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Pfam PF00013 KH domain 557 614 5.2E-11 T 23-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 DLM_2567 a1e798312bba9872a43ec93c90fe5d68 715 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.2E-19 T 23-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DLM_0960 a8c0ab8ba6827b632f0464c907cc768e 115 Pfam PF03692 Putative zinc- or iron-chelating domain 12 90 4.4E-7 T 23-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DLM_2211 9ec639aac1204fb1ae67d1eaad052c33 487 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 482 4.8E-145 T 23-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DLM_2211 9ec639aac1204fb1ae67d1eaad052c33 487 SUPERFAMILY SSF52540 1 240 9.91E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2211 9ec639aac1204fb1ae67d1eaad052c33 487 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 231 1.5E-24 T 23-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DLM_2211 9ec639aac1204fb1ae67d1eaad052c33 487 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 255 438 1.4E-56 T 23-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DLM_2211 9ec639aac1204fb1ae67d1eaad052c33 487 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 487 210.256 T 23-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DLM_2211 9ec639aac1204fb1ae67d1eaad052c33 487 Gene3D G3DSA:3.40.50.880 257 401 1.1E-15 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2211 9ec639aac1204fb1ae67d1eaad052c33 487 Gene3D G3DSA:3.40.50.300 1 243 2.5E-58 T 23-10-2018 DLM_2211 9ec639aac1204fb1ae67d1eaad052c33 487 SUPERFAMILY SSF52317 256 448 5.47E-39 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2316 3e03177b58c40ea34248a00b15a4c73d 442 Gene3D G3DSA:3.90.190.10 289 433 1.0E-15 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like DLM_2316 3e03177b58c40ea34248a00b15a4c73d 442 Pfam PF00782 Dual specificity phosphatase, catalytic domain 360 430 1.6E-11 T 23-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 DLM_2316 3e03177b58c40ea34248a00b15a4c73d 442 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 380 390 - T 23-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 DLM_2316 3e03177b58c40ea34248a00b15a4c73d 442 SUPERFAMILY SSF52799 301 432 1.41E-21 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like DLM_2316 3e03177b58c40ea34248a00b15a4c73d 442 SMART SM00195 303 433 6.7E-4 T 23-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 DLM_2316 3e03177b58c40ea34248a00b15a4c73d 442 SUPERFAMILY SSF48317 5 202 2.62E-5 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DLM_2316 3e03177b58c40ea34248a00b15a4c73d 442 Pfam PF14378 PAP2 superfamily 71 199 2.5E-7 T 23-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 DLM_1436 38aea7da7ef9259a6018d3a90e14f350 293 Pfam PF13714 Phosphoenolpyruvate phosphomutase 9 247 3.1E-51 T 23-10-2018 DLM_1436 38aea7da7ef9259a6018d3a90e14f350 293 SUPERFAMILY SSF51621 4 284 5.38E-100 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_1436 38aea7da7ef9259a6018d3a90e14f350 293 ProSitePatterns PS00161 Isocitrate lyase signature. 118 123 - T 23-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 DLM_1436 38aea7da7ef9259a6018d3a90e14f350 293 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 2 289 50.269 T 23-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 DLM_1436 38aea7da7ef9259a6018d3a90e14f350 293 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 5 288 1.2E-130 T 23-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 DLM_1436 38aea7da7ef9259a6018d3a90e14f350 293 Gene3D G3DSA:3.20.20.60 2 293 7.9E-104 T 23-10-2018 DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 SUPERFAMILY SSF52922 531 660 3.27E-44 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 Gene3D G3DSA:3.40.50.970 2 325 1.3E-133 T 23-10-2018 DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 SUPERFAMILY SSF52518 5 329 1.85E-123 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 23-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 Gene3D G3DSA:3.40.50.970 326 536 1.2E-80 T 23-10-2018 DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 SUPERFAMILY SSF52518 335 525 1.23E-64 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 1.2E-163 T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 Pfam PF02780 Transketolase, C-terminal domain 539 652 3.6E-16 T 23-10-2018 IPR033248 Transketolase, C-terminal domain DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 SMART SM00861 354 524 1.4E-64 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 6.1E-44 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 Gene3D G3DSA:3.40.50.920 538 661 1.3E-42 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DLM_4038 44f7699a45fc0dccbc027f408bf754ae 661 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 660 9.8E-299 T 23-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 Pfam PF03449 Transcription elongation factor, N-terminal 28 98 7.1E-23 T 23-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 Gene3D G3DSA:3.10.50.30 103 183 1.4E-22 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 Hamap MF_00105 Transcription elongation factor GreA [greA]. 26 179 26.772 T 23-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 PIRSF PIRSF006092 24 182 1.6E-38 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 SUPERFAMILY SSF54534 106 180 1.1E-17 T 23-10-2018 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 27 182 1.0E-70 T 23-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 Hamap MF_00930 Transcription elongation factor GreB [greB]. 25 181 49.809 T 23-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 Gene3D G3DSA:1.10.287.180 26 100 7.7E-26 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 SUPERFAMILY SSF46557 27 101 1.44E-25 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 41 72 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DLM_0302 3c72f1503d73ec11c104f11c6febdf4e 184 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 107 180 5.0E-20 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DLM_0913 b41b884226ad0028a05a0cd0a0117387 457 Gene3D G3DSA:1.20.140.10 302 444 7.7E-36 T 23-10-2018 DLM_0913 b41b884226ad0028a05a0cd0a0117387 457 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 299 440 1.4E-31 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_0913 b41b884226ad0028a05a0cd0a0117387 457 Gene3D G3DSA:1.10.540.10 50 175 9.5E-16 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_0913 b41b884226ad0028a05a0cd0a0117387 457 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 55 160 1.6E-8 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_0913 b41b884226ad0028a05a0cd0a0117387 457 SUPERFAMILY SSF56645 51 296 1.83E-40 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_0913 b41b884226ad0028a05a0cd0a0117387 457 SUPERFAMILY SSF47203 298 450 9.72E-36 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_0913 b41b884226ad0028a05a0cd0a0117387 457 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 184 286 2.4E-17 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_0913 b41b884226ad0028a05a0cd0a0117387 457 Gene3D G3DSA:2.40.110.10 183 301 2.5E-26 T 23-10-2018 DLM_2780 6ac57930d839777c491db8aa294c0deb 288 Gene3D G3DSA:3.40.190.10 161 254 6.1E-50 T 23-10-2018 DLM_2780 6ac57930d839777c491db8aa294c0deb 288 Gene3D G3DSA:3.40.190.10 96 261 6.1E-50 T 23-10-2018 DLM_2780 6ac57930d839777c491db8aa294c0deb 288 Pfam PF03466 LysR substrate binding domain 88 281 1.6E-27 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2780 6ac57930d839777c491db8aa294c0deb 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.2E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2780 6ac57930d839777c491db8aa294c0deb 288 SUPERFAMILY SSF46785 5 112 1.44E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2780 6ac57930d839777c491db8aa294c0deb 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2780 6ac57930d839777c491db8aa294c0deb 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2780 6ac57930d839777c491db8aa294c0deb 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2780 6ac57930d839777c491db8aa294c0deb 288 SUPERFAMILY SSF53850 89 285 9.77E-29 T 23-10-2018 DLM_2780 6ac57930d839777c491db8aa294c0deb 288 Gene3D G3DSA:1.10.10.10 4 95 3.9E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 SUPERFAMILY SSF55785 508 612 1.24E-12 T 23-10-2018 IPR035965 PAS domain superfamily DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Gene3D G3DSA:3.30.450.20 490 605 4.1E-17 T 23-10-2018 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Pfam PF03924 CHASE domain 88 178 3.1E-9 T 23-10-2018 IPR006189 CHASE domain DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 SMART SM00387 737 853 8.8E-35 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 SUPERFAMILY SSF47384 607 693 1.88E-21 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Gene3D G3DSA:1.10.287.130 606 694 4.8E-25 T 23-10-2018 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 SMART SM00091 355 421 8.8E-7 T 23-10-2018 IPR000014 PAS domain DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 SMART SM00091 490 556 0.041 T 23-10-2018 IPR000014 PAS domain DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 SUPERFAMILY SSF55785 340 465 2.79E-21 T 23-10-2018 IPR035965 PAS domain superfamily DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Gene3D G3DSA:3.30.565.10 699 857 5.5E-38 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 SMART SM00388 623 691 1.5E-23 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 489 609 1.8E-7 T 23-10-2018 IPR000014 PAS domain DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 351 474 3.4E-16 T 23-10-2018 IPR000014 PAS domain DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 779 793 6.0E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 797 807 6.0E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 837 850 6.0E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 831 6.0E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Pfam PF00512 His Kinase A (phospho-acceptor) domain 623 689 1.0E-20 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Gene3D G3DSA:3.30.450.20 341 464 1.4E-21 T 23-10-2018 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Pfam PF00989 PAS fold 358 464 5.8E-9 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 SUPERFAMILY SSF55874 680 853 3.93E-43 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 738 851 7.8E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4500 2a93175806a42f9c4feca1f7edbf694d 870 Pfam PF13426 PAS domain 510 584 1.2E-5 T 23-10-2018 IPR000014 PAS domain DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Gene3D G3DSA:3.30.70.1430 562 656 0.0 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Gene3D G3DSA:3.30.2090.10 707 800 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 SUPERFAMILY SSF82693 135 323 2.62E-20 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Gene3D G3DSA:1.20.1640.10 508 1014 0.0 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Gene3D G3DSA:3.30.70.1440 657 857 0.0 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 SUPERFAMILY SSF82866 798 1020 1.96E-51 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 SUPERFAMILY SSF82714 182 263 1.27E-17 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 SUPERFAMILY SSF82866 289 488 2.75E-49 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Gene3D G3DSA:3.30.70.1430 40 808 0.0 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.9E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.9E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.9E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.9E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.9E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.9E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.9E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 4.9E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 SUPERFAMILY SSF82693 560 652 7.32E-9 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 SUPERFAMILY SSF82714 708 797 5.75E-7 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Pfam PF00873 AcrB/AcrD/AcrF family 5 1017 3.3E-274 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 Gene3D G3DSA:1.20.1640.10 10 507 0.0 T 23-10-2018 DLM_0149 7a0bbdf001dce5cdc8cffefb188519c3 1050 SUPERFAMILY SSF82693 40 134 4.87E-25 T 23-10-2018 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 SUPERFAMILY SSF52540 1 216 1.6E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 TIGRFAM TIGR01351 adk: adenylate kinase 2 216 5.1E-72 T 23-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 PRINTS PR00094 Adenylate kinase signature 4 17 1.4E-33 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 PRINTS PR00094 Adenylate kinase signature 173 187 1.4E-33 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 PRINTS PR00094 Adenylate kinase signature 156 171 1.4E-33 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 PRINTS PR00094 Adenylate kinase signature 81 97 1.4E-33 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 PRINTS PR00094 Adenylate kinase signature 32 46 1.4E-33 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 Pfam PF00406 Adenylate kinase 5 185 1.8E-54 T 23-10-2018 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 Gene3D G3DSA:3.40.50.300 1 218 4.0E-75 T 23-10-2018 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 Hamap MF_00235 Adenylate kinase [adk]. 1 217 51.463 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DLM_0244 64073c8006bb9a959ce6aeb500abac0c 218 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.0E-16 T 23-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 Gene3D G3DSA:3.30.450.20 32 158 6.2E-15 T 23-10-2018 DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 Gene3D G3DSA:3.30.450.20 159 270 1.2E-23 T 23-10-2018 DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 SUPERFAMILY SSF55785 144 270 8.2E-20 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 SMART SM00086 230 272 1.6E-7 T 23-10-2018 IPR001610 PAC motif DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 SMART SM00086 105 147 520.0 T 23-10-2018 IPR001610 PAC motif DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 Pfam PF08447 PAS fold 187 266 1.3E-14 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 SUPERFAMILY SSF55785 48 156 7.33E-11 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 Pfam PF08448 PAS fold 45 148 1.5E-6 T 23-10-2018 IPR013656 PAS fold-4 DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 SMART SM00091 159 224 39.0 T 23-10-2018 IPR000014 PAS domain DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 SMART SM00091 36 102 0.02 T 23-10-2018 IPR000014 PAS domain DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 34 154 1.1E-6 T 23-10-2018 IPR000014 PAS domain DLM_0925 f87d5c0a0147b5bfc232eb52ef1221e8 295 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 207 274 1.6E-6 T 23-10-2018 IPR000014 PAS domain DLM_3154 03402b0e90bb7db70d299b97b32f6cc1 294 SUPERFAMILY SSF103481 37 138 9.42E-18 T 23-10-2018 DLM_3154 03402b0e90bb7db70d299b97b32f6cc1 294 Pfam PF00892 EamA-like transporter family 150 281 2.1E-24 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3154 03402b0e90bb7db70d299b97b32f6cc1 294 Pfam PF00892 EamA-like transporter family 5 135 9.4E-26 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3154 03402b0e90bb7db70d299b97b32f6cc1 294 SUPERFAMILY SSF103481 191 282 3.14E-19 T 23-10-2018 DLM_0251 a3d9b891441e454cfa59e060fa6c160f 276 PIRSF PIRSF005052 1 276 4.4E-102 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 DLM_0251 a3d9b891441e454cfa59e060fa6c160f 276 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 274 37.666 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 DLM_0251 a3d9b891441e454cfa59e060fa6c160f 276 Gene3D G3DSA:3.40.50.300 60 155 5.7E-6 T 23-10-2018 DLM_0251 a3d9b891441e454cfa59e060fa6c160f 276 Pfam PF03668 P-loop ATPase protein family 1 274 4.8E-88 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 DLM_0251 a3d9b891441e454cfa59e060fa6c160f 276 SUPERFAMILY SSF52540 1 150 3.49E-9 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1801 64ec5478f7a421b82168becfcd848304 404 Pfam PF13458 Periplasmic binding protein 44 386 4.7E-63 T 23-10-2018 IPR028081 Leucine-binding protein domain DLM_1801 64ec5478f7a421b82168becfcd848304 404 SUPERFAMILY SSF53822 44 391 1.14E-102 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1801 64ec5478f7a421b82168becfcd848304 404 Gene3D G3DSA:3.40.50.2300 46 368 6.1E-110 T 23-10-2018 DLM_1801 64ec5478f7a421b82168becfcd848304 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 45 61 1.9E-9 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_1801 64ec5478f7a421b82168becfcd848304 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 83 1.9E-9 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_1801 64ec5478f7a421b82168becfcd848304 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 276 294 1.9E-9 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_1801 64ec5478f7a421b82168becfcd848304 404 Gene3D G3DSA:3.40.50.2300 166 295 6.1E-110 T 23-10-2018 DLM_1333 52145affe1a82608e2b6be699a2fa972 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 2.0E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1333 52145affe1a82608e2b6be699a2fa972 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 4.6E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1333 52145affe1a82608e2b6be699a2fa972 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 4.6E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1333 52145affe1a82608e2b6be699a2fa972 211 Gene3D G3DSA:1.10.357.10 81 210 2.0E-27 T 23-10-2018 DLM_1333 52145affe1a82608e2b6be699a2fa972 211 Gene3D G3DSA:1.10.10.60 14 65 7.5E-16 T 23-10-2018 DLM_1333 52145affe1a82608e2b6be699a2fa972 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DLM_1333 52145affe1a82608e2b6be699a2fa972 211 SUPERFAMILY SSF46689 19 89 1.23E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3775 6f99018df84c5081dad8c689717c58e0 568 Gene3D G3DSA:3.30.750.24 428 561 1.2E-26 T 23-10-2018 IPR036513 STAS domain superfamily DLM_3775 6f99018df84c5081dad8c689717c58e0 568 SUPERFAMILY SSF52091 448 560 1.35E-19 T 23-10-2018 IPR036513 STAS domain superfamily DLM_3775 6f99018df84c5081dad8c689717c58e0 568 TIGRFAM TIGR00815 sulP: sulfate permease 11 543 6.0E-118 T 23-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 DLM_3775 6f99018df84c5081dad8c689717c58e0 568 Pfam PF01740 STAS domain 451 546 4.9E-18 T 23-10-2018 IPR002645 STAS domain DLM_3775 6f99018df84c5081dad8c689717c58e0 568 Pfam PF00916 Sulfate permease family 20 398 5.4E-85 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DLM_3364 c76dc105d5fbb29df0646f63639ca1c7 200 Gene3D G3DSA:3.40.30.10 2 192 1.4E-75 T 23-10-2018 DLM_3364 c76dc105d5fbb29df0646f63639ca1c7 200 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 5.7E-18 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_3364 c76dc105d5fbb29df0646f63639ca1c7 200 Gene3D G3DSA:1.20.1050.10 80 184 1.4E-75 T 23-10-2018 DLM_3364 c76dc105d5fbb29df0646f63639ca1c7 200 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 184 1.7E-5 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal DLM_3364 c76dc105d5fbb29df0646f63639ca1c7 200 SUPERFAMILY SSF52833 1 101 2.36E-27 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3364 c76dc105d5fbb29df0646f63639ca1c7 200 SUPERFAMILY SSF47616 73 198 1.71E-23 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_4143 95af82e29a0287aebdb0cc3676998bd3 231 Gene3D G3DSA:3.40.50.2300 1 121 9.5E-35 T 23-10-2018 DLM_4143 95af82e29a0287aebdb0cc3676998bd3 231 SMART SM00862 152 225 2.5E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_4143 95af82e29a0287aebdb0cc3676998bd3 231 Pfam PF00072 Response regulator receiver domain 4 113 1.3E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4143 95af82e29a0287aebdb0cc3676998bd3 231 SMART SM00448 1 112 4.6E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4143 95af82e29a0287aebdb0cc3676998bd3 231 Gene3D G3DSA:1.10.10.10 128 230 7.6E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4143 95af82e29a0287aebdb0cc3676998bd3 231 SUPERFAMILY SSF46894 128 225 5.1E-22 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_4143 95af82e29a0287aebdb0cc3676998bd3 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 5.0E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_4143 95af82e29a0287aebdb0cc3676998bd3 231 SUPERFAMILY SSF52172 1 130 1.99E-37 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2298 1fa40f8337691d484c29c608001b3696 856 SUPERFAMILY SSF55021 784 836 2.9E-10 T 23-10-2018 DLM_2298 1fa40f8337691d484c29c608001b3696 856 Pfam PF01966 HD domain 439 556 3.1E-12 T 23-10-2018 IPR006674 HD domain DLM_2298 1fa40f8337691d484c29c608001b3696 856 SUPERFAMILY SSF109604 404 530 1.1E-13 T 23-10-2018 DLM_2298 1fa40f8337691d484c29c608001b3696 856 SMART SM00471 435 582 6.7E-8 T 23-10-2018 IPR003607 HD/PDEase domain DLM_2298 1fa40f8337691d484c29c608001b3696 856 Gene3D G3DSA:1.10.3210.10 427 555 2.8E-7 T 23-10-2018 DLM_2298 1fa40f8337691d484c29c608001b3696 856 Gene3D G3DSA:3.30.70.260 784 855 6.2E-8 T 23-10-2018 DLM_2298 1fa40f8337691d484c29c608001b3696 856 Pfam PF01909 Nucleotidyltransferase domain 49 93 2.3E-6 T 23-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DLM_2298 1fa40f8337691d484c29c608001b3696 856 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 20 853 1.1E-240 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DLM_2298 1fa40f8337691d484c29c608001b3696 856 SUPERFAMILY SSF81593 183 289 2.04E-7 T 23-10-2018 DLM_2298 1fa40f8337691d484c29c608001b3696 856 SUPERFAMILY SSF55021 676 741 3.41E-10 T 23-10-2018 DLM_2298 1fa40f8337691d484c29c608001b3696 856 Pfam PF01842 ACT domain 787 845 1.0E-7 T 23-10-2018 IPR002912 ACT domain DLM_2298 1fa40f8337691d484c29c608001b3696 856 Pfam PF08335 GlnD PII-uridylyltransferase 165 303 1.6E-31 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DLM_2298 1fa40f8337691d484c29c608001b3696 856 SUPERFAMILY SSF81301 38 156 2.29E-18 T 23-10-2018 DLM_2298 1fa40f8337691d484c29c608001b3696 856 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 856 298.972 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DLM_2298 1fa40f8337691d484c29c608001b3696 856 PIRSF PIRSF006288 3 856 0.0 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 Pfam PF10502 Signal peptidase, peptidase S26 268 306 1.4E-4 T 23-10-2018 IPR019533 Peptidase S26 DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 111 127 2.0E-21 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 175 187 2.0E-21 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 269 288 2.0E-21 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 Gene3D G3DSA:2.170.230.10 186 268 3.4E-65 T 23-10-2018 DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 ProSitePatterns PS00761 Signal peptidases I signature 3. 274 287 - T 23-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 Gene3D G3DSA:2.10.109.10 109 309 3.4E-65 T 23-10-2018 DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 Pfam PF00717 Peptidase S24-like 117 199 9.8E-19 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 SUPERFAMILY SSF51306 109 315 1.36E-62 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DLM_1443 72c0a39ca4c1e40b2cb81e57d9862c97 320 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 98 309 3.8E-46 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DLM_4501 461505ba6b8a2233fa12c892be2917d8 276 SUPERFAMILY SSF52540 24 275 1.4E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4501 461505ba6b8a2233fa12c892be2917d8 276 Pfam PF13614 AAA domain 27 204 1.7E-41 T 23-10-2018 IPR025669 AAA domain DLM_4501 461505ba6b8a2233fa12c892be2917d8 276 Gene3D G3DSA:3.40.50.300 24 276 3.4E-59 T 23-10-2018 DLM_0946 68088b60aaba74d6637134d5e55118a0 324 Gene3D G3DSA:1.10.10.60 217 323 1.1E-28 T 23-10-2018 DLM_0946 68088b60aaba74d6637134d5e55118a0 324 Pfam PF12833 Helix-turn-helix domain 239 321 8.0E-27 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0946 68088b60aaba74d6637134d5e55118a0 324 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 315 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_0946 68088b60aaba74d6637134d5e55118a0 324 SUPERFAMILY SSF46689 269 322 4.3E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0946 68088b60aaba74d6637134d5e55118a0 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 303 1.5E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0946 68088b60aaba74d6637134d5e55118a0 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 319 1.5E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0946 68088b60aaba74d6637134d5e55118a0 324 SMART SM00342 232 319 4.0E-27 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0323 a5a76d324bba959d43bf1d012348d367 293 Gene3D G3DSA:3.40.50.300 28 257 2.0E-26 T 23-10-2018 DLM_0323 a5a76d324bba959d43bf1d012348d367 293 SUPERFAMILY SSF52540 27 257 1.72E-20 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0937 6f7a7693cfa39a5581b503cb0f07fef9 248 SUPERFAMILY SSF75708 48 247 5.49E-59 T 23-10-2018 DLM_0937 6f7a7693cfa39a5581b503cb0f07fef9 248 Gene3D G3DSA:1.10.287.500 70 203 1.1E-46 T 23-10-2018 DLM_0937 6f7a7693cfa39a5581b503cb0f07fef9 248 Pfam PF04344 Chemotaxis phosphatase, CheZ 51 248 2.4E-74 T 23-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DLM_0937 6f7a7693cfa39a5581b503cb0f07fef9 248 PIRSF PIRSF002884 27 248 8.1E-74 T 23-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Pfam PF00679 Elongation factor G C-terminus 606 691 2.6E-33 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 SUPERFAMILY SSF50447 271 408 3.06E-35 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Gene3D G3DSA:2.40.30.10 293 404 7.0E-44 T 23-10-2018 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 SUPERFAMILY SSF54211 483 604 1.69E-41 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Gene3D G3DSA:3.30.230.10 488 693 8.3E-89 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Gene3D G3DSA:3.30.70.240 609 680 8.3E-89 T 23-10-2018 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Gene3D G3DSA:3.40.50.300 1 292 1.5E-110 T 23-10-2018 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 SMART SM00838 605 693 8.4E-58 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Pfam PF03144 Elongation factor Tu domain 2 328 395 1.3E-16 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 23-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.6E-16 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.6E-16 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.6E-16 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.6E-16 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-16 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 SUPERFAMILY SSF54980 406 484 9.71E-26 T 23-10-2018 IPR035647 EF-G domain III/V-like DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.047 T 23-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Pfam PF03764 Elongation factor G, domain IV 483 602 2.1E-45 T 23-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Pfam PF14492 Elongation Factor G, domain II 408 481 7.6E-35 T 23-10-2018 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Gene3D G3DSA:3.30.70.870 409 487 7.1E-34 T 23-10-2018 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 SMART SM00889 484 603 6.7E-68 T 23-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.2E-65 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 186 1.1E-31 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 SUPERFAMILY SSF52540 6 288 2.03E-106 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4388 c2b5661e64fc27c553b6a1309c3f26b7 698 SUPERFAMILY SSF54980 608 694 2.49E-31 T 23-10-2018 IPR035647 EF-G domain III/V-like DLM_4252 d2c7664db84011b15c5b7d2c10711e34 438 SUPERFAMILY SSF52540 14 253 4.17E-66 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4252 d2c7664db84011b15c5b7d2c10711e34 438 Pfam PF09821 C-terminal AAA-associated domain 305 423 1.9E-42 T 23-10-2018 IPR018632 C-terminal AAA-associated domain DLM_4252 d2c7664db84011b15c5b7d2c10711e34 438 SMART SM00382 42 224 4.2E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4252 d2c7664db84011b15c5b7d2c10711e34 438 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_4252 d2c7664db84011b15c5b7d2c10711e34 438 Gene3D G3DSA:3.40.50.300 10 284 7.6E-63 T 23-10-2018 DLM_4252 d2c7664db84011b15c5b7d2c10711e34 438 Pfam PF00005 ABC transporter 33 172 4.8E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1405 fa3e9e306606aa1c8dad32ee5de2d658 370 Pfam PF00850 Histone deacetylase domain 42 327 6.2E-76 T 23-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1405 fa3e9e306606aa1c8dad32ee5de2d658 370 PRINTS PR01270 Histone deacetylase superfamily signature 174 189 5.3E-16 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1405 fa3e9e306606aa1c8dad32ee5de2d658 370 PRINTS PR01270 Histone deacetylase superfamily signature 259 269 5.3E-16 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1405 fa3e9e306606aa1c8dad32ee5de2d658 370 PRINTS PR01270 Histone deacetylase superfamily signature 140 163 5.3E-16 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1405 fa3e9e306606aa1c8dad32ee5de2d658 370 Gene3D G3DSA:3.40.800.20 2 370 1.5E-140 T 23-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1405 fa3e9e306606aa1c8dad32ee5de2d658 370 SUPERFAMILY SSF52768 4 357 8.63E-100 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily DLM_2739 1241b20a370e351175813b454fd4812f 324 Pfam PF13353 4Fe-4S single cluster domain 18 101 9.4E-6 T 23-10-2018 DLM_2739 1241b20a370e351175813b454fd4812f 324 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 2 324 37.4 T 23-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_2739 1241b20a370e351175813b454fd4812f 324 Pfam PF04055 Radical SAM superfamily 15 175 1.2E-23 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_2739 1241b20a370e351175813b454fd4812f 324 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 308 2.8E-34 T 23-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_2739 1241b20a370e351175813b454fd4812f 324 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 23-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_2739 1241b20a370e351175813b454fd4812f 324 SMART SM00729 11 213 3.0E-4 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_2739 1241b20a370e351175813b454fd4812f 324 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 324 8.4E-109 T 23-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_2739 1241b20a370e351175813b454fd4812f 324 Gene3D G3DSA:3.20.20.70 1 324 2.7E-82 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2739 1241b20a370e351175813b454fd4812f 324 SUPERFAMILY SSF102114 3 276 1.31E-67 T 23-10-2018 DLM_2528 14348cb5bb53d4f0d68e1fe5fabecff1 96 Gene3D G3DSA:3.30.460.10 5 96 1.7E-18 T 23-10-2018 DLM_2528 14348cb5bb53d4f0d68e1fe5fabecff1 96 SUPERFAMILY SSF81301 3 95 6.91E-19 T 23-10-2018 DLM_2528 14348cb5bb53d4f0d68e1fe5fabecff1 96 Pfam PF01909 Nucleotidyltransferase domain 27 88 3.2E-8 T 23-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 Gene3D G3DSA:2.160.10.10 104 316 7.0E-59 T 23-10-2018 DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 27 96 1.0E-23 T 23-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 SUPERFAMILY SSF51161 37 323 1.73E-75 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 Gene3D G3DSA:3.40.1390.10 5 103 1.2E-24 T 23-10-2018 DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 15 333 36.202 T 23-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 153 186 3.2E-6 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 229 264 3.4E-6 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 112 149 0.05 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_1966 80c987adc3791b69d25f92fc8fe84731 356 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 15 336 3.2E-115 T 23-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 Gene3D G3DSA:1.10.8.80 247 336 3.3E-25 T 23-10-2018 DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 Gene3D G3DSA:3.40.50.300 2 202 3.0E-63 T 23-10-2018 DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 Pfam PF13519 von Willebrand factor type A domain 467 571 1.1E-16 T 23-10-2018 IPR002035 von Willebrand factor, type A DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 SUPERFAMILY SSF53300 467 597 5.15E-22 T 23-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 Pfam PF01078 Magnesium chelatase, subunit ChlI 117 182 2.6E-6 T 23-10-2018 IPR000523 Magnesium chelatase ChlI domain DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 SMART SM00327 464 643 9.6E-19 T 23-10-2018 IPR002035 von Willebrand factor, type A DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 SMART SM00382 28 205 1.5E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 TIGRFAM TIGR02442 Cob-chelat-sub: cobaltochelatase subunit 5 632 2.8E-246 T 23-10-2018 IPR012804 Cobaltochelatase subunit, putative DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 Gene3D G3DSA:3.40.50.410 457 643 1.0E-21 T 23-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DLM_2217 4eabcc9b0b8741e1ae2e256fd3482d3a 648 SUPERFAMILY SSF52540 5 327 7.78E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1205 0e0578410de5ea8dc575f0403f3142c3 280 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 146 265 7.1E-20 T 23-10-2018 DLM_1205 0e0578410de5ea8dc575f0403f3142c3 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 1.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1205 0e0578410de5ea8dc575f0403f3142c3 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 1.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1205 0e0578410de5ea8dc575f0403f3142c3 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1205 0e0578410de5ea8dc575f0403f3142c3 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1205 0e0578410de5ea8dc575f0403f3142c3 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1205 0e0578410de5ea8dc575f0403f3142c3 280 Pfam PF00106 short chain dehydrogenase 5 131 2.0E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1205 0e0578410de5ea8dc575f0403f3142c3 280 SUPERFAMILY SSF51735 2 266 2.5E-36 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3751 8a290944dbc972cf9626df2e212499b4 584 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 10 477 3.3E-187 T 23-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 SUPERFAMILY SSF55604 407 478 7.19E-17 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 Pfam PF02378 Phosphotransferase system, EIIC 15 324 1.2E-76 T 23-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 381 466 2.8E-16 T 23-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 Gene3D G3DSA:3.30.1360.60 513 580 5.0E-8 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 Pfam PF00367 phosphotransferase system, EIIB 515 547 4.1E-6 T 23-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 Pfam PF00367 phosphotransferase system, EIIB 411 441 6.1E-12 T 23-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 Gene3D G3DSA:3.30.1360.60 401 482 1.5E-22 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 419 436 - T 23-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DLM_3751 8a290944dbc972cf9626df2e212499b4 584 SUPERFAMILY SSF55604 514 565 2.62E-7 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_4547 cfc0d3f80218a5154b06e41f8f08f1c8 186 SUPERFAMILY SSF143456 5 186 2.35E-65 T 23-10-2018 DLM_4547 cfc0d3f80218a5154b06e41f8f08f1c8 186 Pfam PF02622 Uncharacterized ACR, COG1678 15 173 3.6E-48 T 23-10-2018 IPR003774 Protein of unknown function UPF0301 DLM_4547 cfc0d3f80218a5154b06e41f8f08f1c8 186 Gene3D G3DSA:3.40.1740.10 2 186 1.5E-69 T 23-10-2018 DLM_4547 cfc0d3f80218a5154b06e41f8f08f1c8 186 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 186 37.946 T 23-10-2018 IPR003774 Protein of unknown function UPF0301 DLM_4148 04020a51af823ed99c2628314366ae68 325 SUPERFAMILY SSF53067 14 322 1.16E-62 T 23-10-2018 DLM_4148 04020a51af823ed99c2628314366ae68 325 Pfam PF02685 Glucokinase 12 320 4.1E-115 T 23-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DLM_4148 04020a51af823ed99c2628314366ae68 325 Gene3D G3DSA:3.40.367.20 106 305 1.4E-107 T 23-10-2018 DLM_4148 04020a51af823ed99c2628314366ae68 325 Gene3D G3DSA:3.30.420.40 12 314 1.4E-107 T 23-10-2018 DLM_4148 04020a51af823ed99c2628314366ae68 325 Hamap MF_00524 Glucokinase [glk]. 10 322 36.019 T 23-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DLM_4148 04020a51af823ed99c2628314366ae68 325 TIGRFAM TIGR00749 glk: glucokinase 12 315 7.6E-110 T 23-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 162 29.32 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 159 2.8E-55 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 Gene3D G3DSA:3.40.50.620 1 163 3.9E-53 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 6.4E-36 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 6.4E-36 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 6.4E-36 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 6.4E-36 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 6.4E-36 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 SUPERFAMILY SSF52374 2 157 5.9E-38 T 23-10-2018 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 Pfam PF01467 Cytidylyltransferase-like 5 133 6.8E-17 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DLM_3211 642cd62c4da5cb51e45611f1ce207014 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 60 2.7E-18 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DLM_3118 7b48827b30cdc97279e5b2a568b88314 280 Gene3D G3DSA:3.40.50.1240 19 259 1.1E-57 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_3118 7b48827b30cdc97279e5b2a568b88314 280 SUPERFAMILY SSF53254 29 255 8.12E-50 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_3118 7b48827b30cdc97279e5b2a568b88314 280 SMART SM00855 29 213 2.4E-19 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_3118 7b48827b30cdc97279e5b2a568b88314 280 PIRSF PIRSF000709 25 139 4.5E-7 T 23-10-2018 DLM_3118 7b48827b30cdc97279e5b2a568b88314 280 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 160 250 1.8E-11 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_3118 7b48827b30cdc97279e5b2a568b88314 280 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 30 144 2.8E-25 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_1337 1cb540d81bacb86dda8a7ce0b0484fd9 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 201 30.555 T 23-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DLM_1337 1cb540d81bacb86dda8a7ce0b0484fd9 201 SUPERFAMILY SSF52218 1 201 3.55E-50 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_1337 1cb540d81bacb86dda8a7ce0b0484fd9 201 Gene3D G3DSA:3.40.50.360 2 201 6.4E-59 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_1337 1cb540d81bacb86dda8a7ce0b0484fd9 201 Pfam PF02525 Flavodoxin-like fold 1 197 8.2E-46 T 23-10-2018 IPR003680 Flavodoxin-like fold DLM_0951 b7d533b2d8e46e1cdee366e2853e01e7 307 SUPERFAMILY SSF46689 215 264 3.14E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0951 b7d533b2d8e46e1cdee366e2853e01e7 307 Pfam PF12833 Helix-turn-helix domain 237 295 3.1E-10 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0951 b7d533b2d8e46e1cdee366e2853e01e7 307 Gene3D G3DSA:1.10.10.60 215 304 6.1E-15 T 23-10-2018 DLM_0951 b7d533b2d8e46e1cdee366e2853e01e7 307 Pfam PF01965 DJ-1/PfpI family 5 175 7.5E-14 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DLM_0951 b7d533b2d8e46e1cdee366e2853e01e7 307 Gene3D G3DSA:3.40.50.880 2 214 5.1E-46 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_0951 b7d533b2d8e46e1cdee366e2853e01e7 307 SMART SM00342 231 298 2.6E-4 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0951 b7d533b2d8e46e1cdee366e2853e01e7 307 SUPERFAMILY SSF52317 4 196 8.02E-31 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_0637 68e68c28a8b54309664abebdb14c2119 108 Gene3D G3DSA:3.40.30.10 4 108 7.2E-35 T 23-10-2018 DLM_0637 68e68c28a8b54309664abebdb14c2119 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.2E-38 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DLM_0637 68e68c28a8b54309664abebdb14c2119 108 Pfam PF00085 Thioredoxin 6 107 6.6E-34 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 DLM_0637 68e68c28a8b54309664abebdb14c2119 108 SUPERFAMILY SSF52833 5 108 2.79E-39 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_0637 68e68c28a8b54309664abebdb14c2119 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DLM_0637 68e68c28a8b54309664abebdb14c2119 108 PIRSF PIRSF000077 2 108 2.2E-44 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DLM_0637 68e68c28a8b54309664abebdb14c2119 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.3E-10 T 23-10-2018 DLM_0637 68e68c28a8b54309664abebdb14c2119 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.3E-10 T 23-10-2018 DLM_0637 68e68c28a8b54309664abebdb14c2119 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.3E-10 T 23-10-2018 DLM_3059 dca74b997d1a45d9e2c2f74eee733e3c 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 5.0E-17 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DLM_3059 dca74b997d1a45d9e2c2f74eee733e3c 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 105 120 5.0E-17 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DLM_3059 dca74b997d1a45d9e2c2f74eee733e3c 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 5.0E-17 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DLM_3059 dca74b997d1a45d9e2c2f74eee733e3c 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 11 167 16.722 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DLM_3059 dca74b997d1a45d9e2c2f74eee733e3c 167 ProSitePatterns PS00855 Signal peptidases II signature. 108 120 - T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DLM_3059 dca74b997d1a45d9e2c2f74eee733e3c 167 Pfam PF01252 Signal peptidase (SPase) II 20 160 1.0E-36 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DLM_3059 dca74b997d1a45d9e2c2f74eee733e3c 167 TIGRFAM TIGR00077 lspA: signal peptidase II 14 164 4.0E-35 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DLM_2294 181d1612eb185bde60e428dc92147d1c 140 Gene3D G3DSA:3.40.50.10110 1 137 4.4E-35 T 23-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DLM_2294 181d1612eb185bde60e428dc92147d1c 140 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 133 2.5E-35 T 23-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 DLM_2294 181d1612eb185bde60e428dc92147d1c 140 SUPERFAMILY SSF102400 1 137 5.36E-36 T 23-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DLM_0574 d2ad4a2a486aecb17ba09609830f64a1 85 Pfam PF17209 Hfq protein 8 70 2.7E-31 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DLM_0574 d2ad4a2a486aecb17ba09609830f64a1 85 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.32 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DLM_0574 d2ad4a2a486aecb17ba09609830f64a1 85 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 7 65 2.8E-28 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DLM_0574 d2ad4a2a486aecb17ba09609830f64a1 85 SUPERFAMILY SSF50182 8 70 4.5E-24 T 23-10-2018 IPR010920 LSM domain superfamily DLM_0574 d2ad4a2a486aecb17ba09609830f64a1 85 Gene3D G3DSA:2.30.30.100 1 79 1.8E-32 T 23-10-2018 DLM_0150 04b230414f53ca1cfe677cbbcc1a73ba 284 Gene3D G3DSA:3.40.190.10 45 246 5.2E-6 T 23-10-2018 DLM_0150 04b230414f53ca1cfe677cbbcc1a73ba 284 Gene3D G3DSA:3.40.190.10 111 208 5.2E-6 T 23-10-2018 DLM_0150 04b230414f53ca1cfe677cbbcc1a73ba 284 SUPERFAMILY SSF53850 43 249 1.63E-16 T 23-10-2018 DLM_4010 2e41d256b832378b3592826be886e768 366 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 23-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DLM_4010 2e41d256b832378b3592826be886e768 366 Pfam PF00155 Aminotransferase class I and II 53 360 4.3E-45 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_4010 2e41d256b832378b3592826be886e768 366 SUPERFAMILY SSF53383 35 362 2.23E-61 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4010 2e41d256b832378b3592826be886e768 366 Gene3D G3DSA:3.90.1150.10 23 354 4.7E-91 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_4010 2e41d256b832378b3592826be886e768 366 Gene3D G3DSA:3.40.640.10 45 271 4.7E-91 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3233 1bec07b1bf0ba7a611e574437642c049 128 SUPERFAMILY SSF55298 11 126 3.46E-34 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_3233 1bec07b1bf0ba7a611e574437642c049 128 Gene3D G3DSA:3.30.1330.40 14 128 1.0E-33 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_3233 1bec07b1bf0ba7a611e574437642c049 128 Pfam PF01042 Endoribonuclease L-PSP 18 125 5.1E-25 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DLM_2588 4fa5588a4686f8cbec0f7270a2d6a124 112 Gene3D G3DSA:3.30.1310.10 1 112 2.5E-43 T 23-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DLM_2588 4fa5588a4686f8cbec0f7270a2d6a124 112 SUPERFAMILY SSF82607 11 106 7.46E-35 T 23-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DLM_2588 4fa5588a4686f8cbec0f7270a2d6a124 112 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 101 22.715 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DLM_2588 4fa5588a4686f8cbec0f7270a2d6a124 112 Pfam PF02575 YbaB/EbfC DNA-binding family 11 103 3.3E-35 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DLM_2588 4fa5588a4686f8cbec0f7270a2d6a124 112 PIRSF PIRSF004555 4 112 1.9E-36 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DLM_2588 4fa5588a4686f8cbec0f7270a2d6a124 112 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 108 4.1E-34 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DLM_0092 ab9fefdee08b608d8a4168bc81a04ecf 231 SUPERFAMILY SSF52402 2 224 1.19E-75 T 23-10-2018 DLM_0092 ab9fefdee08b608d8a4168bc81a04ecf 231 PIRSF PIRSF000090 1 231 5.5E-77 T 23-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DLM_0092 ab9fefdee08b608d8a4168bc81a04ecf 231 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 137 157 - T 23-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DLM_0092 ab9fefdee08b608d8a4168bc81a04ecf 231 SMART SM00893 5 193 1.8E-63 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_0092 ab9fefdee08b608d8a4168bc81a04ecf 231 Pfam PF01012 Electron transfer flavoprotein domain 12 188 6.0E-46 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_0092 ab9fefdee08b608d8a4168bc81a04ecf 231 Gene3D G3DSA:3.40.50.620 1 229 1.3E-77 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0270 00c1c963cc816361fdef2fbc317f5775 127 SUPERFAMILY SSF55331 2 125 1.32E-40 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily DLM_0270 00c1c963cc816361fdef2fbc317f5775 127 Gene3D G3DSA:3.30.429.10 2 127 7.5E-49 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily DLM_0270 00c1c963cc816361fdef2fbc317f5775 127 Pfam PF14552 Tautomerase enzyme 38 119 2.2E-34 T 23-10-2018 IPR037479 Tautomerase, MSAD family DLM_1419 4e92654ffc86a95b100024a964dd12da 263 Pfam PF00005 ABC transporter 21 160 1.6E-26 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1419 4e92654ffc86a95b100024a964dd12da 263 Gene3D G3DSA:3.40.50.300 1 249 2.4E-61 T 23-10-2018 DLM_1419 4e92654ffc86a95b100024a964dd12da 263 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1419 4e92654ffc86a95b100024a964dd12da 263 SUPERFAMILY SSF52540 4 220 1.17E-63 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1419 4e92654ffc86a95b100024a964dd12da 263 SMART SM00382 30 211 1.4E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 34.549 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 Pfam PF02556 Preprotein translocase subunit SecB 5 144 6.0E-58 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 142 1.4E-59 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 SUPERFAMILY SSF54611 2 141 2.83E-54 T 23-10-2018 IPR035958 SecB-like superfamily DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 Gene3D G3DSA:3.10.420.10 1 150 2.4E-59 T 23-10-2018 IPR035958 SecB-like superfamily DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 6.3E-38 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 6.3E-38 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 6.3E-38 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DLM_0159 d943f8cdad459b72647e0f34b078d1db 150 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 6.3E-38 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 140 152 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 Gene3D G3DSA:1.10.540.10 9 135 1.8E-38 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 229 4.9E-21 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 SUPERFAMILY SSF47203 245 392 1.77E-40 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 134 1.6E-29 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 SUPERFAMILY SSF56645 10 241 1.03E-73 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 Gene3D G3DSA:1.20.140.10 243 395 2.5E-39 T 23-10-2018 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 387 8.4E-27 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_4526 4751abbc6244862eb91368413da7e9a5 395 Gene3D G3DSA:2.40.110.10 137 241 2.8E-38 T 23-10-2018 DLM_2473 9dc7331fe707552a54f89769dbed6710 640 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 143 309 1.3E-74 T 23-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 DLM_2473 9dc7331fe707552a54f89769dbed6710 640 Gene3D G3DSA:3.40.50.1820 267 428 4.8E-8 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2473 9dc7331fe707552a54f89769dbed6710 640 SUPERFAMILY SSF53474 261 557 1.88E-32 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2473 9dc7331fe707552a54f89769dbed6710 640 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 104 628 2.4E-208 T 23-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 251 383 1.3E-21 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 PIRSF PIRSF016578 150 404 1.4E-20 T 23-10-2018 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 PIRSF PIRSF016578 6 100 1.6E-12 T 23-10-2018 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 SUPERFAMILY SSF56645 30 227 2.09E-48 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 224 2.3E-12 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 29 130 3.4E-10 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 Gene3D G3DSA:1.20.140.10 232 406 3.7E-53 T 23-10-2018 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 SUPERFAMILY SSF47203 247 405 1.59E-21 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 Gene3D G3DSA:1.10.540.10 25 133 3.8E-24 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 Gene3D G3DSA:2.40.110.10 134 231 4.2E-29 T 23-10-2018 DLM_1529 cb483ae32a105d4f8f234840edf2b84d 408 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 20 408 1.5E-196 T 23-10-2018 IPR023922 Sulphate-starvation-induced SfnB DLM_3784 a46851a507487d34002d15c2b242d2c6 123 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.708 T 23-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DLM_3784 a46851a507487d34002d15c2b242d2c6 123 SUPERFAMILY SSF81301 1 108 8.17E-36 T 23-10-2018 DLM_3784 a46851a507487d34002d15c2b242d2c6 123 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 2.7E-34 T 23-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DLM_3784 a46851a507487d34002d15c2b242d2c6 123 Gene3D G3DSA:3.30.460.10 1 105 3.9E-34 T 23-10-2018 DLM_3784 a46851a507487d34002d15c2b242d2c6 123 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 8.6E-24 T 23-10-2018 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 1.5E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 SUPERFAMILY SSF47384 206 284 4.71E-14 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.7E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.7E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 1.7E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.7E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 SMART SM00304 165 220 1.1E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 437 9.6E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 Pfam PF00672 HAMP domain 165 216 1.4E-8 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 SMART SM00388 221 284 2.5E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 SMART SM00387 329 438 2.2E-26 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 SUPERFAMILY SSF55874 274 437 4.19E-37 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 Gene3D G3DSA:1.10.287.130 169 286 3.6E-27 T 23-10-2018 DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 Gene3D G3DSA:3.30.565.10 290 438 9.1E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2272 4f0e9d9232bb6215e417c8587b652e21 438 SUPERFAMILY SSF158472 165 218 3.53E-6 T 23-10-2018 DLM_1961 cf3d659b215a7101db4f8bb877d27493 168 SMART SM00987 10 159 4.0E-9 T 23-10-2018 DLM_1961 cf3d659b215a7101db4f8bb877d27493 168 SUPERFAMILY SSF52141 8 164 2.48E-34 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_1961 cf3d659b215a7101db4f8bb877d27493 168 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 9 158 4.0E-43 T 23-10-2018 IPR026353 Hypoxanthine-DNA glycosylase DLM_1961 cf3d659b215a7101db4f8bb877d27493 168 Gene3D G3DSA:3.40.470.10 5 167 2.0E-48 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_1961 cf3d659b215a7101db4f8bb877d27493 168 SMART SM00986 10 159 4.0E-9 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_1961 cf3d659b215a7101db4f8bb877d27493 168 Pfam PF03167 Uracil DNA glycosylase superfamily 12 157 9.3E-12 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_2148 1b2d30b14e7e44f3f6e26bf1a3292874 264 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 1 133 4.9E-52 T 23-10-2018 DLM_2148 1b2d30b14e7e44f3f6e26bf1a3292874 264 SUPERFAMILY SSF54593 1 137 6.36E-39 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2148 1b2d30b14e7e44f3f6e26bf1a3292874 264 Gene3D G3DSA:3.10.180.10 1 144 1.3E-46 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2148 1b2d30b14e7e44f3f6e26bf1a3292874 264 SUPERFAMILY SSF54593 127 241 3.32E-7 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 609 626 - T 23-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 SUPERFAMILY SSF51246 336 453 1.05E-40 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 Pfam PF02785 Biotin carboxylase C-terminal domain 341 448 1.1E-39 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 Pfam PF00364 Biotin-requiring enzyme 586 650 1.1E-14 T 23-10-2018 IPR000089 Biotin/lipoyl attachment DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 SMART SM00878 341 448 1.7E-57 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 Gene3D G3DSA:2.40.50.100 576 653 5.6E-22 T 23-10-2018 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 327 2.9E-70 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 SUPERFAMILY SSF56059 83 353 1.24E-64 T 23-10-2018 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 Gene3D G3DSA:3.30.470.130 1 455 2.5E-199 T 23-10-2018 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.7E-45 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 SUPERFAMILY SSF52440 1 113 1.08E-48 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_0697 0bd748be94f217e4e613dcea9e3d5691 655 SUPERFAMILY SSF51230 573 651 1.15E-19 T 23-10-2018 IPR011053 Single hybrid motif DLM_2034 f01a7047e44ca42ccec582442b7365f7 72 Gene3D G3DSA:2.40.50.100 5 69 2.8E-20 T 23-10-2018 DLM_2034 f01a7047e44ca42ccec582442b7365f7 72 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 5 69 6.7E-18 T 23-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 DLM_2034 f01a7047e44ca42ccec582442b7365f7 72 Pfam PF03459 TOBE domain 8 67 1.1E-15 T 23-10-2018 IPR005116 Transport-associated OB, type 1 DLM_2034 f01a7047e44ca42ccec582442b7365f7 72 SUPERFAMILY SSF50331 6 70 2.43E-16 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_3972 4ce3158fb5e48f036cb9ba580c93950e 108 SUPERFAMILY SSF52821 3 104 3.8E-29 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_3972 4ce3158fb5e48f036cb9ba580c93950e 108 Gene3D G3DSA:3.40.250.10 3 106 1.8E-23 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_3972 4ce3158fb5e48f036cb9ba580c93950e 108 SMART SM00450 8 103 7.5E-18 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_3972 4ce3158fb5e48f036cb9ba580c93950e 108 Pfam PF00581 Rhodanese-like domain 11 99 2.4E-13 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_4554 7d6117af8ee2c588885e71c1c3ff0eff 257 Pfam PF00483 Nucleotidyl transferase 2 213 5.2E-15 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DLM_4554 7d6117af8ee2c588885e71c1c3ff0eff 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 1.4E-140 T 23-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 DLM_4554 7d6117af8ee2c588885e71c1c3ff0eff 257 Gene3D G3DSA:3.90.550.10 1 257 8.3E-68 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_4554 7d6117af8ee2c588885e71c1c3ff0eff 257 SUPERFAMILY SSF53448 1 256 1.49E-64 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_2765 8b4e4a61aab4242117c3b4a452a3e24d 123 SUPERFAMILY SSF46626 14 119 5.68E-19 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2765 8b4e4a61aab4242117c3b4a452a3e24d 123 Pfam PF00034 Cytochrome c 31 108 5.2E-10 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2765 8b4e4a61aab4242117c3b4a452a3e24d 123 Gene3D G3DSA:1.10.760.10 1 123 6.6E-35 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_3768 edaad8ebdd4bbf308c2846eddf9fce45 400 Gene3D G3DSA:3.30.70.360 184 298 1.7E-135 T 23-10-2018 DLM_3768 edaad8ebdd4bbf308c2846eddf9fce45 400 PIRSF PIRSF005962 4 392 2.1E-128 T 23-10-2018 IPR017439 Amidohydrolase GO:0016787 DLM_3768 edaad8ebdd4bbf308c2846eddf9fce45 400 Pfam PF01546 Peptidase family M20/M25/M40 74 386 1.9E-34 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 DLM_3768 edaad8ebdd4bbf308c2846eddf9fce45 400 SUPERFAMILY SSF53187 4 390 4.09E-87 T 23-10-2018 DLM_3768 edaad8ebdd4bbf308c2846eddf9fce45 400 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 377 1.1E-108 T 23-10-2018 IPR017439 Amidohydrolase GO:0016787 DLM_3768 edaad8ebdd4bbf308c2846eddf9fce45 400 Pfam PF07687 Peptidase dimerisation domain 189 286 1.3E-8 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain DLM_3768 edaad8ebdd4bbf308c2846eddf9fce45 400 SUPERFAMILY SSF55031 186 299 7.07E-30 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DLM_3768 edaad8ebdd4bbf308c2846eddf9fce45 400 Gene3D G3DSA:3.40.630.10 16 374 1.7E-135 T 23-10-2018 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 Gene3D G3DSA:3.50.50.60 5 366 7.5E-137 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 1.1E-28 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 315 321 1.1E-28 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 1.1E-28 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 1.1E-28 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 1.1E-28 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 1.1E-28 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 477 3.8E-10 T 23-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 Pfam PF01266 FAD dependent oxidoreductase 5 358 8.0E-54 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 Gene3D G3DSA:1.10.8.870 393 462 2.1E-22 T 23-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 Gene3D G3DSA:3.30.9.10 82 322 7.5E-137 T 23-10-2018 DLM_3904 60e12c5ebd932f3469e384c5a402d748 511 SUPERFAMILY SSF51905 4 324 1.42E-34 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4469 1c2b4f8e8518be42c77c7f3bd35badf4 491 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 435 4.6E-174 T 23-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DLM_4469 1c2b4f8e8518be42c77c7f3bd35badf4 491 SUPERFAMILY SSF50475 3 326 1.49E-122 T 23-10-2018 DLM_4469 1c2b4f8e8518be42c77c7f3bd35badf4 491 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 491 72.635 T 23-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DLM_4469 1c2b4f8e8518be42c77c7f3bd35badf4 491 SUPERFAMILY SSF143968 327 491 2.35E-67 T 23-10-2018 DLM_4469 1c2b4f8e8518be42c77c7f3bd35badf4 491 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 459 7.7E-171 T 23-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DLM_4469 1c2b4f8e8518be42c77c7f3bd35badf4 491 Gene3D G3DSA:1.20.5.570 459 491 1.8E-13 T 23-10-2018 DLM_4469 1c2b4f8e8518be42c77c7f3bd35badf4 491 Gene3D G3DSA:3.40.1670.10 341 458 1.3E-51 T 23-10-2018 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 SUPERFAMILY SSF53383 149 604 7.0E-114 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 585 1.5E-150 T 23-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 612 736 9.8E-47 T 23-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 Gene3D G3DSA:3.90.1150.10 461 631 1.7E-68 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 PIRSF PIRSF009393 1 751 1.0E-281 T 23-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 Gene3D G3DSA:3.40.640.10 149 459 1.2E-94 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 SUPERFAMILY SSF55904 607 750 7.45E-45 T 23-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 Gene3D G3DSA:3.90.100.10 632 751 4.8E-40 T 23-10-2018 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 143 5.8E-36 T 23-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 Gene3D G3DSA:3.40.50.2300 5 148 2.2E-20 T 23-10-2018 DLM_3389 43c3b3b246146b7f6072f805a49f7101 751 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 394 408 - T 23-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DLM_0963 fcba9e53ead3e781a28d774a16cc95a0 245 SUPERFAMILY SSF53850 20 240 4.81E-28 T 23-10-2018 DLM_0963 fcba9e53ead3e781a28d774a16cc95a0 245 SMART SM00062 19 240 1.5E-4 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_0963 fcba9e53ead3e781a28d774a16cc95a0 245 Gene3D G3DSA:3.40.190.10 99 200 3.5E-19 T 23-10-2018 DLM_0963 fcba9e53ead3e781a28d774a16cc95a0 245 Gene3D G3DSA:3.40.190.10 23 236 3.5E-19 T 23-10-2018 DLM_0963 fcba9e53ead3e781a28d774a16cc95a0 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 20 236 1.6E-18 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1200 e9851467dab7b341c05594da920b8d7d 45 Gene3D G3DSA:1.10.260.40 1 45 3.2E-7 T 23-10-2018 DLM_1200 e9851467dab7b341c05594da920b8d7d 45 SUPERFAMILY SSF47413 2 34 2.57E-5 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_1952 39a93ad698fe65cf52064c7009c5da78 422 Gene3D G3DSA:1.10.3720.10 172 420 1.6E-46 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1952 39a93ad698fe65cf52064c7009c5da78 422 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 224 413 2.2E-9 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1952 39a93ad698fe65cf52064c7009c5da78 422 SUPERFAMILY SSF161098 37 413 4.66E-45 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0276 363d429d65a62ce189019d09b8381acd 420 Pfam PF01566 Natural resistance-associated macrophage protein 44 383 6.1E-55 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_1018 9057b4956e74276dc9aa9f1967e8332f 340 Gene3D G3DSA:3.40.50.2300 55 296 1.5E-17 T 23-10-2018 DLM_1018 9057b4956e74276dc9aa9f1967e8332f 340 SUPERFAMILY SSF53822 38 311 1.92E-20 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1018 9057b4956e74276dc9aa9f1967e8332f 340 Pfam PF13407 Periplasmic binding protein domain 56 296 1.3E-12 T 23-10-2018 IPR025997 Periplasmic binding protein DLM_1018 9057b4956e74276dc9aa9f1967e8332f 340 Gene3D G3DSA:3.40.50.2300 139 280 1.5E-17 T 23-10-2018 DLM_0556 207763ee08adc2cc3f9d8337cd21ca3b 312 SUPERFAMILY SSF53822 27 308 3.93E-81 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_0556 207763ee08adc2cc3f9d8337cd21ca3b 312 Gene3D G3DSA:3.40.50.2300 132 305 4.0E-88 T 23-10-2018 DLM_0556 207763ee08adc2cc3f9d8337cd21ca3b 312 Pfam PF13407 Periplasmic binding protein domain 29 288 4.7E-57 T 23-10-2018 IPR025997 Periplasmic binding protein DLM_0556 207763ee08adc2cc3f9d8337cd21ca3b 312 Gene3D G3DSA:3.40.50.2300 29 298 4.0E-88 T 23-10-2018 DLM_1693 87011398575fc184a43db4c8b789fba9 311 Gene3D G3DSA:3.40.190.290 93 296 7.7E-49 T 23-10-2018 DLM_1693 87011398575fc184a43db4c8b789fba9 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.1E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1693 87011398575fc184a43db4c8b789fba9 311 Gene3D G3DSA:1.10.10.10 3 92 5.7E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1693 87011398575fc184a43db4c8b789fba9 311 SUPERFAMILY SSF53850 91 294 9.41E-40 T 23-10-2018 DLM_1693 87011398575fc184a43db4c8b789fba9 311 SUPERFAMILY SSF46785 4 90 5.72E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1693 87011398575fc184a43db4c8b789fba9 311 Pfam PF03466 LysR substrate binding domain 90 294 5.4E-37 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1693 87011398575fc184a43db4c8b789fba9 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1693 87011398575fc184a43db4c8b789fba9 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1693 87011398575fc184a43db4c8b789fba9 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1390 134f26ba76b59f550fa5b1b315fd379f 524 SUPERFAMILY SSF53850 24 515 7.24E-93 T 23-10-2018 DLM_1390 134f26ba76b59f550fa5b1b315fd379f 524 Gene3D G3DSA:3.90.76.10 39 204 1.6E-93 T 23-10-2018 DLM_1390 134f26ba76b59f550fa5b1b315fd379f 524 PIRSF PIRSF002741 5 522 1.6E-54 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DLM_1390 134f26ba76b59f550fa5b1b315fd379f 524 Gene3D G3DSA:3.40.190.10 205 508 1.6E-93 T 23-10-2018 DLM_1390 134f26ba76b59f550fa5b1b315fd379f 524 Gene3D G3DSA:3.10.105.10 284 500 1.6E-93 T 23-10-2018 DLM_1390 134f26ba76b59f550fa5b1b315fd379f 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 440 8.0E-61 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 238 6.3E-16 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 SUPERFAMILY SSF54534 133 248 3.54E-32 T 23-10-2018 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 Hamap MF_00303 Trigger factor [tig]. 1 421 20.461 T 23-10-2018 IPR005215 Trigger factor GO:0015031 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 Gene3D G3DSA:3.10.50.40 151 247 1.5E-93 T 23-10-2018 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 Gene3D G3DSA:1.10.3120.10 117 420 1.5E-93 T 23-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 TIGRFAM TIGR00115 tig: trigger factor 11 415 6.4E-133 T 23-10-2018 IPR005215 Trigger factor GO:0015031 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 Gene3D G3DSA:3.30.70.1050 1 116 1.5E-34 T 23-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 415 1.1E-33 T 23-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 PIRSF PIRSF003095 1 435 2.6E-120 T 23-10-2018 IPR005215 Trigger factor GO:0015031 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 SUPERFAMILY SSF109998 249 432 5.1E-48 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 2.4E-35 T 23-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DLM_1090 4d948feda1e51a0fe1c9de5cf484a58c 435 SUPERFAMILY SSF102735 1 130 1.29E-33 T 23-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DLM_4138 12091367388bf4284ed39fd754d75674 369 Pfam PF00005 ABC transporter 20 162 1.7E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4138 12091367388bf4284ed39fd754d75674 369 SUPERFAMILY SSF50331 237 368 1.68E-23 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_4138 12091367388bf4284ed39fd754d75674 369 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_4138 12091367388bf4284ed39fd754d75674 369 SMART SM00382 29 220 2.5E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4138 12091367388bf4284ed39fd754d75674 369 Gene3D G3DSA:3.40.50.300 1 239 1.2E-76 T 23-10-2018 DLM_4138 12091367388bf4284ed39fd754d75674 369 Gene3D G3DSA:2.40.50.140 289 353 2.9E-19 T 23-10-2018 DLM_4138 12091367388bf4284ed39fd754d75674 369 SUPERFAMILY SSF52540 4 243 1.77E-84 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4138 12091367388bf4284ed39fd754d75674 369 Gene3D G3DSA:2.40.50.100 240 366 2.9E-19 T 23-10-2018 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 SMART SM01210 328 421 2.6E-51 T 23-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 3.7E-28 T 23-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 SUPERFAMILY SSF52440 1 101 1.58E-34 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 23-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 421 43.173 T 23-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 Gene3D G3DSA:3.40.50.20 1 93 1.3E-36 T 23-10-2018 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.0E-35 T 23-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 SMART SM01209 101 294 2.1E-137 T 23-10-2018 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 SUPERFAMILY SSF56059 102 321 1.13E-62 T 23-10-2018 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 421 2.5E-169 T 23-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 Gene3D G3DSA:3.30.1490.20 119 188 1.9E-26 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 Gene3D G3DSA:3.30.470.20 189 327 1.3E-57 T 23-10-2018 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 Gene3D G3DSA:3.90.600.10 328 422 3.4E-31 T 23-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 9.7E-78 T 23-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DLM_3760 48f8ab5f845f3c20363c528f38461a98 425 SUPERFAMILY SSF51246 327 421 5.57E-30 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DLM_4151 639dbfcd784a529636b5e25720d4ae19 249 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 31 249 2.8E-43 T 23-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 DLM_4151 639dbfcd784a529636b5e25720d4ae19 249 SUPERFAMILY SSF111364 25 249 1.83E-25 T 23-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Pfam PF00563 EAL domain 821 1054 6.0E-75 T 23-10-2018 IPR001633 EAL domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Gene3D G3DSA:3.30.450.20 394 509 2.1E-18 T 23-10-2018 DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 638 802 3.5E-40 T 23-10-2018 IPR000160 GGDEF domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SMART SM00091 274 340 6.1E-7 T 23-10-2018 IPR000014 PAS domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SMART SM00091 399 464 1.8E-5 T 23-10-2018 IPR000014 PAS domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SMART SM00091 519 584 1.8E-8 T 23-10-2018 IPR000014 PAS domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SUPERFAMILY SSF55785 530 639 1.12E-26 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Gene3D G3DSA:3.30.450.20 517 640 1.7E-33 T 23-10-2018 DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Gene3D G3DSA:3.20.20.450 816 1067 7.7E-106 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SMART SM00267 631 803 1.6E-64 T 23-10-2018 IPR000160 GGDEF domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 275 392 9.8E-13 T 23-10-2018 IPR000014 PAS domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 524 638 4.0E-23 T 23-10-2018 IPR000014 PAS domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 395 516 9.9E-21 T 23-10-2018 IPR000014 PAS domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Gene3D G3DSA:3.30.450.20 260 393 9.3E-19 T 23-10-2018 DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SUPERFAMILY SSF55785 384 509 1.54E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SUPERFAMILY SSF55073 647 804 4.79E-47 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SMART SM00052 813 1059 3.2E-121 T 23-10-2018 IPR001633 EAL domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SMART SM00086 471 511 0.6 T 23-10-2018 IPR001610 PAC motif DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SMART SM00086 589 631 5.4E-10 T 23-10-2018 IPR001610 PAC motif DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SMART SM00086 344 387 430.0 T 23-10-2018 IPR001610 PAC motif DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Pfam PF13426 PAS domain 410 510 4.4E-8 T 23-10-2018 IPR000014 PAS domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Pfam PF13426 PAS domain 530 629 2.1E-15 T 23-10-2018 IPR000014 PAS domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SUPERFAMILY SSF55785 263 385 7.4E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Gene3D G3DSA:3.30.70.270 641 815 5.0E-60 T 23-10-2018 DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Pfam PF08448 PAS fold 280 388 1.4E-15 T 23-10-2018 IPR013656 PAS fold-4 DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 Pfam PF00990 Diguanylate cyclase, GGDEF domain 642 798 8.0E-48 T 23-10-2018 IPR000160 GGDEF domain DLM_3132 0d158d83a9a0899a845a0bd592cb8b03 1083 SUPERFAMILY SSF141868 818 1066 1.27E-90 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1641 1cb34803708683d8ae72d4400a84ff11 54 Pfam PF07866 Protein of unknown function (DUF1653) 1 49 2.7E-18 T 23-10-2018 IPR023387 DUF1653-like domain DLM_1641 1cb34803708683d8ae72d4400a84ff11 54 Gene3D G3DSA:2.30.30.320 1 54 5.3E-15 T 23-10-2018 IPR037135 DUF1653-like domain superfamily DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 Pfam PF00231 ATP synthase 1 264 1.4E-80 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 PRINTS PR00126 ATP synthase gamma subunit signature 243 264 1.1E-36 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 PRINTS PR00126 ATP synthase gamma subunit signature 144 161 1.1E-36 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 PRINTS PR00126 ATP synthase gamma subunit signature 212 231 1.1E-36 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 PRINTS PR00126 ATP synthase gamma subunit signature 51 70 1.1E-36 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 Gene3D G3DSA:3.40.1380.10 38 184 6.5E-91 T 23-10-2018 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 SUPERFAMILY SSF52943 1 265 3.27E-78 T 23-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 265 2.2E-88 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 251 264 - T 23-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 Gene3D G3DSA:1.10.287.80 1 261 6.5E-91 T 23-10-2018 DLM_3661 514927cbc9c6eb039021c7c7e5da0cec 265 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 265 27.923 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_0046 0474bcfcaded2f8648ca152e270a1e47 346 PIRSF PIRSF002756 3 339 7.2E-108 T 23-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 DLM_0046 0474bcfcaded2f8648ca152e270a1e47 346 SUPERFAMILY SSF53850 27 337 1.03E-101 T 23-10-2018 DLM_0046 0474bcfcaded2f8648ca152e270a1e47 346 Gene3D G3DSA:3.40.190.10 28 324 6.1E-123 T 23-10-2018 DLM_0046 0474bcfcaded2f8648ca152e270a1e47 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 27 336 4.6E-125 T 23-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 DLM_0046 0474bcfcaded2f8648ca152e270a1e47 346 Pfam PF12849 PBP superfamily domain 21 307 1.5E-60 T 23-10-2018 IPR024370 PBP domain DLM_0046 0474bcfcaded2f8648ca152e270a1e47 346 Gene3D G3DSA:3.40.190.10 101 277 6.1E-123 T 23-10-2018 DLM_1700 bc51331e0595d41eb405248150d98c16 381 Gene3D G3DSA:2.40.50.100 60 204 1.1E-66 T 23-10-2018 DLM_1700 bc51331e0595d41eb405248150d98c16 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 288 3.1E-15 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_1700 bc51331e0595d41eb405248150d98c16 381 SUPERFAMILY SSF111369 49 293 1.15E-68 T 23-10-2018 DLM_1700 bc51331e0595d41eb405248150d98c16 381 Gene3D G3DSA:2.40.30.170 54 278 1.1E-66 T 23-10-2018 DLM_1700 bc51331e0595d41eb405248150d98c16 381 Gene3D G3DSA:2.40.420.20 279 370 7.8E-21 T 23-10-2018 DLM_1700 bc51331e0595d41eb405248150d98c16 381 Gene3D G3DSA:1.10.287.470 95 168 1.1E-66 T 23-10-2018 DLM_1700 bc51331e0595d41eb405248150d98c16 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 368 2.4E-79 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_2715 a77c1ec596a7cd0d2e3bff14e307844f 332 SUPERFAMILY SSF56534 52 316 9.94E-103 T 23-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily DLM_2715 a77c1ec596a7cd0d2e3bff14e307844f 332 Gene3D G3DSA:1.10.800.10 31 332 2.5E-118 T 23-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 DLM_2715 a77c1ec596a7cd0d2e3bff14e307844f 332 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 169 180 - T 23-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 DLM_2715 a77c1ec596a7cd0d2e3bff14e307844f 332 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 61 302 2.5E-123 T 23-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 DLM_2715 a77c1ec596a7cd0d2e3bff14e307844f 332 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 58 285 4.0E-46 T 23-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DLM_2715 a77c1ec596a7cd0d2e3bff14e307844f 332 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 231 249 2.1E-11 T 23-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DLM_2715 a77c1ec596a7cd0d2e3bff14e307844f 332 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 126 148 2.1E-11 T 23-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DLM_2715 a77c1ec596a7cd0d2e3bff14e307844f 332 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 263 282 2.1E-11 T 23-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 SUPERFAMILY SSF51998 356 895 1.34E-180 T 23-10-2018 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 Pfam PF03477 ATP cone domain 30 124 2.7E-15 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 Pfam PF03477 ATP cone domain 139 223 5.3E-9 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 Gene3D G3DSA:3.20.70.20 211 903 7.7E-249 T 23-10-2018 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 736 758 - T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 Pfam PF02867 Ribonucleotide reductase, barrel domain 357 892 5.1E-181 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 SUPERFAMILY SSF48168 144 355 3.92E-63 T 23-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 283 895 1.7E-213 T 23-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 PRINTS PR01183 Ribonucleotide reductase large chain signature 567 578 1.4E-42 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 PRINTS PR01183 Ribonucleotide reductase large chain signature 605 628 1.4E-42 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 PRINTS PR01183 Ribonucleotide reductase large chain signature 747 774 1.4E-42 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 PRINTS PR01183 Ribonucleotide reductase large chain signature 432 451 1.4E-42 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 PRINTS PR01183 Ribonucleotide reductase large chain signature 671 694 1.4E-42 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 PRINTS PR01183 Ribonucleotide reductase large chain signature 643 665 1.4E-42 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1882 7721fd489a1034496c137b703e2ddce8 957 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 280 353 5.5E-21 T 23-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_2083 d46156ec18d1ec9b43d9ac3f22c83fbf 1258 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 471 544 5.1E-19 T 23-10-2018 IPR013491 Caudovirus, tape measure, N-terminal DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 205 272 4.2E-20 T 23-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 127 193 7.5E-23 T 23-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 SUPERFAMILY SSF50331 127 196 2.43E-21 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 PIRSF PIRSF005763 5 273 7.4E-90 T 23-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 SUPERFAMILY SSF50331 205 272 1.63E-20 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 SUPERFAMILY SSF46785 8 110 4.9E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 88 2.6E-14 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 Gene3D G3DSA:2.40.50.100 201 273 2.2E-26 T 23-10-2018 DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 Gene3D G3DSA:2.40.50.100 124 195 3.7E-27 T 23-10-2018 DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 Gene3D G3DSA:1.10.10.10 1 118 4.2E-33 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 24 111 7.7E-30 T 23-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 Pfam PF03459 TOBE domain 207 269 7.3E-17 T 23-10-2018 IPR005116 Transport-associated OB, type 1 DLM_1833 5fe8c657639900d69f5463cd5ece9672 273 Pfam PF03459 TOBE domain 129 192 8.9E-18 T 23-10-2018 IPR005116 Transport-associated OB, type 1 DLM_3045 5828c322ce24f811d944ffc5cd7f091c 169 Gene3D G3DSA:2.60.120.480 3 166 4.0E-50 T 23-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DLM_3045 5828c322ce24f811d944ffc5cd7f091c 169 PIRSF PIRSF017306 1 161 1.4E-38 T 23-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DLM_3045 5828c322ce24f811d944ffc5cd7f091c 169 Pfam PF04115 Ureidoglycolate lyase 4 163 2.0E-46 T 23-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DLM_3045 5828c322ce24f811d944ffc5cd7f091c 169 SUPERFAMILY SSF51182 1 164 6.23E-51 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_3607 5490187c8bfab414a4ad4757171e29b7 312 Pfam PF01636 Phosphotransferase enzyme family 27 250 2.7E-32 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase DLM_3607 5490187c8bfab414a4ad4757171e29b7 312 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 301 3.6E-121 T 23-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DLM_3607 5490187c8bfab414a4ad4757171e29b7 312 Hamap MF_00301 Homoserine kinase [thrB]. 1 312 136.866 T 23-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DLM_3607 5490187c8bfab414a4ad4757171e29b7 312 Gene3D G3DSA:3.30.200.20 1 103 5.9E-37 T 23-10-2018 DLM_3607 5490187c8bfab414a4ad4757171e29b7 312 Gene3D G3DSA:3.90.1200.10 105 310 2.9E-74 T 23-10-2018 DLM_3607 5490187c8bfab414a4ad4757171e29b7 312 SUPERFAMILY SSF56112 5 307 2.46E-78 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_3266 f2c0e92b03722dc9610c58f037d48e82 97 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 83 1.5E-32 T 23-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DLM_3266 f2c0e92b03722dc9610c58f037d48e82 97 Gene3D G3DSA:3.30.2270.10 1 96 1.4E-31 T 23-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DLM_3636 5dcf1dfb5362160966b5bd566dd07000 349 SUPERFAMILY SSF81901 60 240 1.57E-20 T 23-10-2018 DLM_3636 5dcf1dfb5362160966b5bd566dd07000 349 SMART SM00671 129 164 2.5E-7 T 23-10-2018 IPR006597 Sel1-like repeat DLM_3636 5dcf1dfb5362160966b5bd566dd07000 349 SMART SM00671 202 233 77.0 T 23-10-2018 IPR006597 Sel1-like repeat DLM_3636 5dcf1dfb5362160966b5bd566dd07000 349 Gene3D G3DSA:1.25.40.10 5 266 5.0E-20 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 419 573 4.0E-35 T 23-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 617 2.1E-267 T 23-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 200 6.2E-41 T 23-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 SUPERFAMILY SSF52467 182 383 6.7E-43 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 455 474 - T 23-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 Gene3D G3DSA:3.40.50.970 390 591 3.3E-43 T 23-10-2018 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 Gene3D G3DSA:3.40.50.1220 215 389 8.0E-39 T 23-10-2018 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 Gene3D G3DSA:3.40.50.970 4 202 5.8E-31 T 23-10-2018 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 SUPERFAMILY SSF52518 397 607 2.62E-48 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 221 347 6.8E-32 T 23-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DLM_0554 7a8903e25585c384f38ea9dde6b8c1d2 619 SUPERFAMILY SSF52518 3 205 7.25E-29 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 SUPERFAMILY SSF82282 38 432 2.09E-116 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Pfam PF02310 B12 binding domain 789 879 6.5E-20 T 23-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Pfam PF02607 B12 binding domain 695 769 1.7E-24 T 23-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Gene3D G3DSA:1.10.288.10 977 1134 1.3E-131 T 23-10-2018 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 TIGRFAM TIGR02082 metH: methionine synthase 43 1233 0.0 T 23-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 SUPERFAMILY SSF52242 784 935 7.33E-47 T 23-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 SMART SM01018 693 776 1.2E-44 T 23-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 PIRSF PIRSF000381 32 1236 0.0 T 23-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 SUPERFAMILY SSF47644 688 775 8.89E-29 T 23-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Pfam PF00809 Pterin binding enzyme 393 631 1.5E-60 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Gene3D G3DSA:3.20.20.330 34 373 5.5E-122 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Gene3D G3DSA:1.10.1240.10 685 773 3.7E-40 T 23-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 SUPERFAMILY SSF56507 942 1266 4.58E-127 T 23-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Gene3D G3DSA:3.40.50.280 786 936 1.4E-56 T 23-10-2018 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Pfam PF02574 Homocysteine S-methyltransferase 48 358 1.0E-78 T 23-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 SUPERFAMILY SSF51717 389 659 3.14E-89 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Gene3D G3DSA:3.20.20.20 374 680 1.0E-126 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Gene3D G3DSA:3.10.196.10 948 1264 1.3E-131 T 23-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_3861 16b0e83da9bda272e524d339eafdc9c8 1267 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 979 1249 2.7E-119 T 23-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DLM_4107 aabace55df775802f440736b807d1223 536 Pfam PF02096 60Kd inner membrane protein 346 524 7.3E-59 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 1 526 22.899 T 23-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR00701 60kDa inner membrane protein signature 490 513 4.8E-68 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR00701 60kDa inner membrane protein signature 407 430 4.8E-68 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR00701 60kDa inner membrane protein signature 316 336 4.8E-68 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR00701 60kDa inner membrane protein signature 58 79 4.8E-68 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR00701 60kDa inner membrane protein signature 146 166 4.8E-68 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR00701 60kDa inner membrane protein signature 200 218 4.8E-68 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR00701 60kDa inner membrane protein signature 454 476 4.8E-68 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR00701 60kDa inner membrane protein signature 235 250 4.8E-68 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR01900 YidC translocation/secretion protein signature 460 475 1.2E-22 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR01900 YidC translocation/secretion protein signature 479 503 1.2E-22 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 PRINTS PR01900 YidC translocation/secretion protein signature 331 347 1.2E-22 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DLM_4107 aabace55df775802f440736b807d1223 536 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 345 524 2.1E-69 T 23-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4107 aabace55df775802f440736b807d1223 536 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 343 1.9E-105 T 23-10-2018 IPR028053 Membrane insertase YidC, N-terminal DLM_4107 aabace55df775802f440736b807d1223 536 Pfam PF14849 YidC periplasmic domain 52 335 1.0E-84 T 23-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain DLM_4107 aabace55df775802f440736b807d1223 536 Gene3D G3DSA:2.70.98.90 48 326 3.1E-88 T 23-10-2018 IPR038221 YidC, periplasmic domain superfamily DLM_0415 0d9a13cedeffb636d3f80b1651cee3d4 581 Gene3D G3DSA:1.10.443.10 354 548 8.7E-13 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DLM_0415 0d9a13cedeffb636d3f80b1651cee3d4 581 SUPERFAMILY SSF56349 210 528 1.59E-15 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DLM_2245 e1b1a7b02effc6b2516da42065e40f87 135 Pfam PF13488 Glycine zipper 28 70 1.9E-7 T 23-10-2018 IPR039567 Glycine zipper domain DLM_2001 7e4fcf4dca941b1fd18bcbe33318171b 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 148 5.8E-36 T 23-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2001 7e4fcf4dca941b1fd18bcbe33318171b 155 Gene3D G3DSA:3.40.50.960 5 154 6.1E-49 T 23-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2001 7e4fcf4dca941b1fd18bcbe33318171b 155 SUPERFAMILY SSF52121 11 154 1.83E-50 T 23-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2001 7e4fcf4dca941b1fd18bcbe33318171b 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 12 153 26.433 T 23-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2001 7e4fcf4dca941b1fd18bcbe33318171b 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 150 6.5E-46 T 23-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_1671 a620c3c86039254dba3f91babecceb4a 335 Gene3D G3DSA:3.90.660.10 49 292 8.0E-108 T 23-10-2018 DLM_1671 a620c3c86039254dba3f91babecceb4a 335 PRINTS PR00419 Adrenodoxin reductase family signature 33 46 9.0E-5 T 23-10-2018 DLM_1671 a620c3c86039254dba3f91babecceb4a 335 PRINTS PR00419 Adrenodoxin reductase family signature 10 32 9.0E-5 T 23-10-2018 DLM_1671 a620c3c86039254dba3f91babecceb4a 335 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 72 1.3E-13 T 23-10-2018 DLM_1671 a620c3c86039254dba3f91babecceb4a 335 Pfam PF01593 Flavin containing amine oxidoreductase 114 330 1.1E-5 T 23-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DLM_1671 a620c3c86039254dba3f91babecceb4a 335 SUPERFAMILY SSF51905 6 330 6.48E-33 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1671 a620c3c86039254dba3f91babecceb4a 335 Gene3D G3DSA:3.50.50.60 11 327 8.0E-108 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 Gene3D G3DSA:1.10.10.10 25 88 5.6E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 Pfam PF13412 Winged helix-turn-helix DNA-binding 35 82 4.5E-17 T 23-10-2018 DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 Pfam PF01037 Lrp/AsnC ligand binding domain 110 174 1.5E-17 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 Gene3D G3DSA:3.30.70.920 89 183 6.0E-23 T 23-10-2018 DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 SMART SM00344 35 144 4.5E-32 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 SUPERFAMILY SSF54909 96 183 1.88E-18 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 SUPERFAMILY SSF46785 26 120 4.15E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 51 2.2E-11 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 62 81 2.2E-11 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_0544 4a0309fe93b44f4c311c49d3432de9e2 185 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 51 62 2.2E-11 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_1319 8a1ec7d3f6fb6f6cb47e85a5aa67b744 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 209 5.4E-19 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DLM_1319 8a1ec7d3f6fb6f6cb47e85a5aa67b744 331 Gene3D G3DSA:3.90.25.10 175 314 1.0E-85 T 23-10-2018 DLM_1319 8a1ec7d3f6fb6f6cb47e85a5aa67b744 331 Gene3D G3DSA:3.40.50.720 6 304 1.0E-85 T 23-10-2018 DLM_1319 8a1ec7d3f6fb6f6cb47e85a5aa67b744 331 SUPERFAMILY SSF51735 1 316 3.33E-38 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2916 04a3c67a1e68013c5240138a216da031 525 SUPERFAMILY SSF54810 398 525 8.76E-47 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 Gene3D G3DSA:3.30.300.10 399 525 9.7E-50 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 Pfam PF00117 Glutamine amidotransferase class-I 6 193 1.3E-38 T 23-10-2018 IPR017926 Glutamine amidotransferase DLM_2916 04a3c67a1e68013c5240138a216da031 525 PRINTS PR00097 Anthranilate synthase component II signature 48 57 3.3E-6 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.3E-6 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 PRINTS PR00097 Anthranilate synthase component II signature 170 183 3.3E-6 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 206 525 3.7E-146 T 23-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DLM_2916 04a3c67a1e68013c5240138a216da031 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 1 525 55.764 T 23-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DLM_2916 04a3c67a1e68013c5240138a216da031 525 Gene3D G3DSA:3.40.50.620 203 398 2.0E-76 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_2916 04a3c67a1e68013c5240138a216da031 525 SUPERFAMILY SSF52402 190 410 1.19E-57 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 170 183 9.0E-8 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 9.0E-8 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 9.0E-8 T 23-10-2018 DLM_2916 04a3c67a1e68013c5240138a216da031 525 Gene3D G3DSA:3.40.50.880 1 196 1.2E-52 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2916 04a3c67a1e68013c5240138a216da031 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 4 196 6.4E-74 T 23-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DLM_2916 04a3c67a1e68013c5240138a216da031 525 Pfam PF02540 NAD synthase 208 287 8.3E-9 T 23-10-2018 IPR022310 NAD/GMP synthase DLM_2916 04a3c67a1e68013c5240138a216da031 525 Pfam PF00958 GMP synthase C terminal domain 437 524 9.0E-41 T 23-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DLM_2916 04a3c67a1e68013c5240138a216da031 525 SUPERFAMILY SSF52317 1 230 1.62E-56 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2549 7fd9d470c2940a314850a749f10798a6 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_2549 7fd9d470c2940a314850a749f10798a6 500 Gene3D G3DSA:3.40.605.10 28 460 3.0E-145 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_2549 7fd9d470c2940a314850a749f10798a6 500 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 483 2.0E-227 T 23-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DLM_2549 7fd9d470c2940a314850a749f10798a6 500 Gene3D G3DSA:3.40.309.10 253 452 3.0E-145 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_2549 7fd9d470c2940a314850a749f10798a6 500 Pfam PF00171 Aldehyde dehydrogenase family 16 479 1.4E-140 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_2549 7fd9d470c2940a314850a749f10798a6 500 SUPERFAMILY SSF53720 5 485 4.84E-145 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 17 39 - T 23-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 PRINTS PR00070 Dihydrofolate reductase signature 95 109 1.2E-14 T 23-10-2018 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 PRINTS PR00070 Dihydrofolate reductase signature 17 27 1.2E-14 T 23-10-2018 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 PRINTS PR00070 Dihydrofolate reductase signature 31 39 1.2E-14 T 23-10-2018 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 PRINTS PR00070 Dihydrofolate reductase signature 44 55 1.2E-14 T 23-10-2018 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 PIRSF PIRSF000194 1 164 8.6E-65 T 23-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 Pfam PF00186 Dihydrofolate reductase 6 161 1.0E-59 T 23-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 Gene3D G3DSA:3.40.430.10 5 163 2.1E-58 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DLM_0328 abd66a8a39903cb2a4f1a6928951749d 164 SUPERFAMILY SSF53597 2 162 1.14E-56 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 398 3.4E-11 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 449 33.29 T 23-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 Gene3D G3DSA:3.40.1190.10 82 313 2.4E-77 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 Gene3D G3DSA:3.40.1390.10 1 79 9.1E-24 T 23-10-2018 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 Gene3D G3DSA:3.90.190.20 315 453 9.1E-42 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 SUPERFAMILY SSF53623 103 313 4.71E-54 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 Pfam PF01225 Mur ligase family, catalytic domain 25 95 5.4E-11 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 SUPERFAMILY SSF63418 1 97 1.96E-23 T 23-10-2018 IPR035911 MurE/MurF, N-terminal DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 Pfam PF08245 Mur ligase middle domain 106 296 5.8E-48 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 SUPERFAMILY SSF53244 317 448 5.49E-38 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4192 6bf911c8a40f2def1ac88ce3befab75e 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 1.7E-139 T 23-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_2171 015c8bfbe7985f9c8fa6ed3c716d5286 373 SUPERFAMILY SSF53807 32 342 1.45E-46 T 23-10-2018 DLM_2171 015c8bfbe7985f9c8fa6ed3c716d5286 373 Pfam PF01497 Periplasmic binding protein 85 317 1.4E-32 T 23-10-2018 IPR002491 ABC transporter periplasmic binding domain DLM_2171 015c8bfbe7985f9c8fa6ed3c716d5286 373 Gene3D G3DSA:3.40.50.1980 29 371 3.5E-92 T 23-10-2018 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Gene3D G3DSA:3.30.565.10 646 809 5.3E-52 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 446 565 1.7E-9 T 23-10-2018 IPR000014 PAS domain DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Pfam PF01627 Hpt domain 1133 1213 3.9E-13 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Gene3D G3DSA:3.30.450.20 224 307 6.8E-14 T 23-10-2018 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SMART SM00448 824 942 1.2E-21 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SMART SM00448 973 1086 2.2E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Pfam PF00072 Response regulator receiver domain 827 942 1.4E-17 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Pfam PF00072 Response regulator receiver domain 975 1081 6.1E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Pfam PF08448 PAS fold 450 559 1.4E-13 T 23-10-2018 IPR013656 PAS fold-4 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 732 746 6.5E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 791 804 6.5E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 750 760 6.5E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 767 785 6.5E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Gene3D G3DSA:1.10.287.130 569 645 2.6E-25 T 23-10-2018 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Pfam PF00512 His Kinase A (phospho-acceptor) domain 580 644 2.9E-18 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SUPERFAMILY SSF103190 161 233 6.28E-6 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Gene3D G3DSA:1.20.120.160 1112 1225 3.8E-20 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SUPERFAMILY SSF47384 569 645 5.89E-21 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SUPERFAMILY SSF52172 822 954 5.55E-26 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 691 805 2.0E-31 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SUPERFAMILY SSF55874 633 802 4.06E-45 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Gene3D G3DSA:3.30.450.20 429 568 5.6E-18 T 23-10-2018 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Gene3D G3DSA:3.30.450.20 161 223 6.8E-14 T 23-10-2018 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Gene3D G3DSA:3.40.50.2300 813 952 2.9E-25 T 23-10-2018 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SUPERFAMILY SSF47226 1069 1211 4.97E-21 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 Gene3D G3DSA:3.40.50.2300 973 1093 2.4E-38 T 23-10-2018 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SUPERFAMILY SSF55785 435 557 1.13E-17 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SMART SM00388 579 644 6.9E-24 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SMART SM00387 691 807 1.8E-39 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SMART SM00091 443 511 1.7E-5 T 23-10-2018 IPR000014 PAS domain DLM_1836 bf8bff72cfc9209d8c71c3089f9d1227 1304 SUPERFAMILY SSF52172 970 1091 4.27E-37 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4160 24776ecbd72ef43f53477b364b6c14eb 207 Gene3D G3DSA:3.40.50.300 1 203 9.3E-50 T 23-10-2018 DLM_4160 24776ecbd72ef43f53477b364b6c14eb 207 Pfam PF01926 50S ribosome-binding GTPase 25 143 2.9E-17 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_4160 24776ecbd72ef43f53477b364b6c14eb 207 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 193 26.921 T 23-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DLM_4160 24776ecbd72ef43f53477b364b6c14eb 207 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 1.0E-66 T 23-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DLM_4160 24776ecbd72ef43f53477b364b6c14eb 207 SUPERFAMILY SSF52540 3 192 6.27E-32 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4228 a650eb2f3302341bfb60bb279720ea3f 249 SUPERFAMILY SSF55174 3 52 7.36E-9 T 23-10-2018 DLM_4228 a650eb2f3302341bfb60bb279720ea3f 249 Pfam PF01728 FtsJ-like methyltransferase 59 244 2.4E-21 T 23-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DLM_4228 a650eb2f3302341bfb60bb279720ea3f 249 Gene3D G3DSA:3.40.50.150 62 248 3.3E-68 T 23-10-2018 DLM_4228 a650eb2f3302341bfb60bb279720ea3f 249 Pfam PF01479 S4 domain 3 43 5.4E-8 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4228 a650eb2f3302341bfb60bb279720ea3f 249 SUPERFAMILY SSF53335 59 246 8.31E-22 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4228 a650eb2f3302341bfb60bb279720ea3f 249 SMART SM00363 2 68 3.7E-8 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4228 a650eb2f3302341bfb60bb279720ea3f 249 PIRSF PIRSF005578 1 248 2.8E-93 T 23-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DLM_4228 a650eb2f3302341bfb60bb279720ea3f 249 Gene3D G3DSA:3.10.290.10 1 61 3.3E-17 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_3199 610a716a558897000eea950b8f562c6e 438 SUPERFAMILY SSF51905 40 404 2.85E-40 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3199 610a716a558897000eea950b8f562c6e 438 Gene3D G3DSA:3.30.9.10 133 355 1.7E-71 T 23-10-2018 DLM_3199 610a716a558897000eea950b8f562c6e 438 Gene3D G3DSA:3.50.50.60 41 394 1.7E-71 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3199 610a716a558897000eea950b8f562c6e 438 Pfam PF01266 FAD dependent oxidoreductase 41 392 2.3E-52 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 SUPERFAMILY SSF111326 9 559 4.19E-263 T 23-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 Gene3D G3DSA:3.40.50.10730 146 353 5.4E-262 T 23-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 ProSitePatterns PS01233 Urocanase signature. 446 461 - T 23-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 Pfam PF01175 Urocanase Rossmann-like domain 145 353 3.9E-87 T 23-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 PIRSF PIRSF001423 1 560 6.1E-297 T 23-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 Gene3D G3DSA:3.40.1770.10 21 546 5.4E-262 T 23-10-2018 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 Pfam PF17392 Urocanase C-terminal domain 356 550 1.5E-91 T 23-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 558 5.0E-295 T 23-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 Pfam PF17391 Urocanase N-terminal domain 16 142 3.4E-63 T 23-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3927 80c51c40bdc1899084056dd7a005269b 560 Hamap MF_00577 Urocanate hydratase [hutU]. 1 560 49.822 T 23-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_1175 dbe374aea87338de858cec82ce4e4d07 217 SUPERFAMILY SSF81342 3 184 9.42E-37 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DLM_1175 dbe374aea87338de858cec82ce4e4d07 217 Gene3D G3DSA:1.20.950.20 1 169 5.1E-18 T 23-10-2018 DLM_1175 dbe374aea87338de858cec82ce4e4d07 217 Pfam PF01292 Prokaryotic cytochrome b561 7 180 1.4E-24 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 SUPERFAMILY SSF53901 271 392 2.18E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 SUPERFAMILY SSF53901 4 270 9.77E-89 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 Gene3D G3DSA:3.40.47.10 6 276 8.1E-158 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 PIRSF PIRSF000429 1 393 8.6E-132 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 6.5E-147 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 1.1E-51 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 Gene3D G3DSA:3.40.47.10 126 389 8.1E-158 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_2474 8275a0dcdcc8368af8930c4112a29398 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.2E-107 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 SUPERFAMILY SSF53271 246 477 2.49E-68 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 Pfam PF00156 Phosphoribosyl transferase domain 288 389 1.4E-6 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 Gene3D G3DSA:3.60.20.10 2 461 5.0E-144 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 PIRSF PIRSF000485 1 476 4.1E-154 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 460 43.206 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 460 5.7E-156 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 Pfam PF13522 Glutamine amidotransferase domain 59 204 3.5E-17 T 23-10-2018 DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 SUPERFAMILY SSF56235 2 253 2.06E-64 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_1056 fc52a3bc1391c48fcf5d61123bd3f52d 504 Gene3D G3DSA:3.40.50.2020 271 440 5.0E-144 T 23-10-2018 DLM_1911 dc7ce14fcf9542baaeb86bc23bc878b5 254 Gene3D G3DSA:3.40.50.300 1 252 3.4E-80 T 23-10-2018 DLM_1911 dc7ce14fcf9542baaeb86bc23bc878b5 254 SUPERFAMILY SSF52540 1 240 1.65E-75 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1911 dc7ce14fcf9542baaeb86bc23bc878b5 254 Pfam PF00005 ABC transporter 17 172 1.5E-36 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1911 dc7ce14fcf9542baaeb86bc23bc878b5 254 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1911 dc7ce14fcf9542baaeb86bc23bc878b5 254 PIRSF PIRSF039085 1 248 1.0E-97 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DLM_1911 dc7ce14fcf9542baaeb86bc23bc878b5 254 SMART SM00382 26 220 2.8E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 5.1E-65 T 23-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 SUPERFAMILY SSF51735 1 179 1.44E-60 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 23-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 SUPERFAMILY SSF55347 155 317 1.9E-69 T 23-10-2018 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 SMART SM00846 3 155 2.8E-90 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 3.0E-131 T 23-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 4.1E-38 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 4.1E-38 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 4.1E-38 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 4.1E-38 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 4.1E-38 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 Gene3D G3DSA:3.40.50.720 4 327 1.9E-144 T 23-10-2018 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 PIRSF PIRSF000149 1 337 8.7E-136 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 106 5.3E-37 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4037 0680e1079afe65d83ddd48f2a42b7b50 337 Gene3D G3DSA:3.30.360.10 154 318 1.9E-144 T 23-10-2018 DLM_3322 8cb65255d040e2233744f4137387da48 119 Gene3D G3DSA:3.30.1130.10 1 117 2.5E-34 T 23-10-2018 DLM_3322 8cb65255d040e2233744f4137387da48 119 SMART SM00905 4 114 5.1E-39 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DLM_3322 8cb65255d040e2233744f4137387da48 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 5.7E-24 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DLM_3322 8cb65255d040e2233744f4137387da48 119 Pfam PF02152 Dihydroneopterin aldolase 4 112 1.3E-27 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DLM_3322 8cb65255d040e2233744f4137387da48 119 SUPERFAMILY SSF55620 1 115 6.12E-34 T 23-10-2018 DLM_2031 373d16498aaf73e2917f46169a1068b1 271 Gene3D G3DSA:3.40.190.10 36 268 1.2E-97 T 23-10-2018 DLM_2031 373d16498aaf73e2917f46169a1068b1 271 Gene3D G3DSA:3.40.190.10 118 222 1.2E-97 T 23-10-2018 DLM_2031 373d16498aaf73e2917f46169a1068b1 271 PIRSF PIRSF002854 6 271 5.7E-102 T 23-10-2018 IPR004872 Lipoprotein NlpA family DLM_2031 373d16498aaf73e2917f46169a1068b1 271 Pfam PF03180 NLPA lipoprotein 36 271 1.4E-94 T 23-10-2018 IPR004872 Lipoprotein NlpA family DLM_2031 373d16498aaf73e2917f46169a1068b1 271 SUPERFAMILY SSF53850 35 271 3.11E-80 T 23-10-2018 DLM_1829 4bf0105f1c53e7faf6e62b4abff21161 249 Gene3D G3DSA:3.40.190.10 103 209 1.2E-71 T 23-10-2018 DLM_1829 4bf0105f1c53e7faf6e62b4abff21161 249 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 245 2.9E-59 T 23-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DLM_1829 4bf0105f1c53e7faf6e62b4abff21161 249 SUPERFAMILY SSF53850 23 248 1.06E-62 T 23-10-2018 DLM_1829 4bf0105f1c53e7faf6e62b4abff21161 249 PIRSF PIRSF004846 2 249 4.0E-76 T 23-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DLM_1829 4bf0105f1c53e7faf6e62b4abff21161 249 Pfam PF13531 Bacterial extracellular solute-binding protein 24 246 2.4E-48 T 23-10-2018 DLM_1829 4bf0105f1c53e7faf6e62b4abff21161 249 Gene3D G3DSA:3.40.190.10 26 246 1.2E-71 T 23-10-2018 DLM_2261 00e7a32b1ee076a9fbfb98d9035d5788 752 Gene3D G3DSA:3.20.70.20 5 752 1.7E-289 T 23-10-2018 DLM_2261 00e7a32b1ee076a9fbfb98d9035d5788 752 Pfam PF02901 Pyruvate formate lyase-like 25 611 2.0E-205 T 23-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 DLM_2261 00e7a32b1ee076a9fbfb98d9035d5788 752 PIRSF PIRSF000379 10 752 0.0 T 23-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DLM_2261 00e7a32b1ee076a9fbfb98d9035d5788 752 Pfam PF01228 Glycine radical 627 733 9.8E-44 T 23-10-2018 IPR001150 Glycine radical domain GO:0003824 DLM_2261 00e7a32b1ee076a9fbfb98d9035d5788 752 SUPERFAMILY SSF51998 7 751 7.32E-275 T 23-10-2018 DLM_2261 00e7a32b1ee076a9fbfb98d9035d5788 752 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 14 752 0.0 T 23-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DLM_2261 00e7a32b1ee076a9fbfb98d9035d5788 752 ProSitePatterns PS00850 Glycine radical domain signature. 722 730 - T 23-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DLM_1662 42e9def9eeef35898b286f30c6221469 93 SUPERFAMILY SSF82057 21 93 3.07E-30 T 23-10-2018 DLM_1662 42e9def9eeef35898b286f30c6221469 93 Gene3D G3DSA:2.20.25.10 1 22 1.8E-6 T 23-10-2018 DLM_1662 42e9def9eeef35898b286f30c6221469 93 Pfam PF03831 PhnA domain 26 93 8.9E-35 T 23-10-2018 IPR013988 PhnA protein, C-terminal DLM_1662 42e9def9eeef35898b286f30c6221469 93 Gene3D G3DSA:2.30.30.40 23 93 5.1E-36 T 23-10-2018 DLM_1662 42e9def9eeef35898b286f30c6221469 93 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 1 93 1.1E-39 T 23-10-2018 IPR004624 PhnA protein DLM_0972 030526ea615f142c39393b17336a7241 463 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 373 382 - T 23-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_0972 030526ea615f142c39393b17336a7241 463 Gene3D G3DSA:3.40.50.12240 22 463 2.0E-157 T 23-10-2018 DLM_0972 030526ea615f142c39393b17336a7241 463 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 462 1.9E-174 T 23-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_0972 030526ea615f142c39393b17336a7241 463 SUPERFAMILY SSF52540 118 385 4.33E-97 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0972 030526ea615f142c39393b17336a7241 463 SMART SM00382 183 366 3.2E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0972 030526ea615f142c39393b17336a7241 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 171 382 2.0E-72 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_0972 030526ea615f142c39393b17336a7241 463 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 33 94 3.6E-6 T 23-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_0972 030526ea615f142c39393b17336a7241 463 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 460 1.8E-197 T 23-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_0133 632456a6f280927b0bae3ac758338707 148 SUPERFAMILY SSF89095 1 146 2.93E-41 T 23-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DLM_0133 632456a6f280927b0bae3ac758338707 148 Gene3D G3DSA:1.10.1510.10 1 90 4.7E-28 T 23-10-2018 DLM_0133 632456a6f280927b0bae3ac758338707 148 Gene3D G3DSA:1.10.10.410 91 147 2.3E-19 T 23-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DLM_0133 632456a6f280927b0bae3ac758338707 148 Pfam PF09424 Yqey-like protein 4 146 5.4E-55 T 23-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 DLM_3264 47aa1fa43e95b783c947f4b3a9bc059e 218 SUPERFAMILY SSF103025 17 200 3.14E-13 T 23-10-2018 DLM_3264 47aa1fa43e95b783c947f4b3a9bc059e 218 Gene3D G3DSA:3.30.1360.120 24 189 6.4E-30 T 23-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DLM_3264 47aa1fa43e95b783c947f4b3a9bc059e 218 Pfam PF04268 Sarcosine oxidase, gamma subunit family 37 187 9.8E-21 T 23-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DLM_3264 47aa1fa43e95b783c947f4b3a9bc059e 218 Gene3D G3DSA:3.30.70.1520 30 113 6.4E-30 T 23-10-2018 DLM_1556 bc091fbd3cf9378531780749fc664ef5 523 Pfam PF00171 Aldehyde dehydrogenase family 19 458 1.8E-50 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_1556 bc091fbd3cf9378531780749fc664ef5 523 Gene3D G3DSA:3.40.309.10 268 454 6.5E-207 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_1556 bc091fbd3cf9378531780749fc664ef5 523 Gene3D G3DSA:3.40.605.10 43 519 6.5E-207 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_1556 bc091fbd3cf9378531780749fc664ef5 523 SUPERFAMILY SSF53720 20 518 1.3E-104 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_3313 0a372aed0ed2ea54003eee5be9773049 247 SUPERFAMILY SSF64167 1 246 4.32E-83 T 23-10-2018 DLM_3313 0a372aed0ed2ea54003eee5be9773049 247 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 5.7E-68 T 23-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DLM_3313 0a372aed0ed2ea54003eee5be9773049 247 Pfam PF01975 Survival protein SurE 4 183 2.6E-58 T 23-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DLM_3313 0a372aed0ed2ea54003eee5be9773049 247 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 247 38.364 T 23-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DLM_3313 0a372aed0ed2ea54003eee5be9773049 247 Gene3D G3DSA:3.40.1210.10 1 247 1.4E-89 T 23-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DLM_2289 0a53cfe4a395577c6fc8941acd980828 150 Gene3D G3DSA:3.40.30.10 2 149 9.7E-43 T 23-10-2018 DLM_2289 0a53cfe4a395577c6fc8941acd980828 150 SUPERFAMILY SSF52833 3 150 7.02E-45 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_2289 0a53cfe4a395577c6fc8941acd980828 150 PIRSF PIRSF000239 1 150 1.1E-23 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_2289 0a53cfe4a395577c6fc8941acd980828 150 Pfam PF00578 AhpC/TSA family 3 128 6.6E-34 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 Gene3D G3DSA:2.40.50.140 51 115 1.9E-23 T 23-10-2018 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 Pfam PF01132 Elongation factor P (EF-P) OB domain 55 109 4.8E-16 T 23-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 Hamap MF_00141 Elongation factor P [efp]. 1 174 42.722 T 23-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 SUPERFAMILY SSF50104 1 50 3.49E-11 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily DLM_2795 ae77ab193d81063eaae7594ea535aead 174 Gene3D G3DSA:2.30.30.30 1 49 1.7E-12 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 TIGRFAM TIGR00038 efp: translation elongation factor P 2 174 2.5E-56 T 23-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 Gene3D G3DSA:2.40.50.140 116 174 9.9E-24 T 23-10-2018 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 SUPERFAMILY SSF50249 116 174 7.71E-14 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2795 ae77ab193d81063eaae7594ea535aead 174 Pfam PF09285 Elongation factor P, C-terminal 117 173 3.6E-21 T 23-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 1 47 1.4E-14 T 23-10-2018 IPR013185 Translation elongation factor, KOW-like DLM_2795 ae77ab193d81063eaae7594ea535aead 174 SMART SM00841 117 173 5.4E-24 T 23-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DLM_2795 ae77ab193d81063eaae7594ea535aead 174 PIRSF PIRSF005901 1 174 9.5E-50 T 23-10-2018 IPR020599 Translation elongation factor P/YeiP DLM_2795 ae77ab193d81063eaae7594ea535aead 174 SUPERFAMILY SSF50249 52 115 1.63E-14 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2795 ae77ab193d81063eaae7594ea535aead 174 SMART SM01185 54 109 1.3E-18 T 23-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DLM_2260 80c0edcf5ba9cca0aae89d4fa8a36bd5 257 ProSitePatterns PS01087 Radical activating enzymes signature. 31 52 - T 23-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DLM_2260 80c0edcf5ba9cca0aae89d4fa8a36bd5 257 Gene3D G3DSA:3.20.20.70 15 257 3.0E-79 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2260 80c0edcf5ba9cca0aae89d4fa8a36bd5 257 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 19 249 8.8E-89 T 23-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 DLM_2260 80c0edcf5ba9cca0aae89d4fa8a36bd5 257 Pfam PF04055 Radical SAM superfamily 38 191 1.4E-25 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_2260 80c0edcf5ba9cca0aae89d4fa8a36bd5 257 Pfam PF13353 4Fe-4S single cluster domain 29 136 4.6E-17 T 23-10-2018 DLM_2260 80c0edcf5ba9cca0aae89d4fa8a36bd5 257 SUPERFAMILY SSF102114 36 219 1.57E-29 T 23-10-2018 DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 SUPERFAMILY SSF53697 10 323 1.56E-67 T 23-10-2018 DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 316 1.9E-110 T 23-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 PIRSF PIRSF004692 1 326 1.1E-132 T 23-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 Gene3D G3DSA:3.40.50.10490 4 197 2.9E-67 T 23-10-2018 DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 Pfam PF00571 CBS domain 203 259 0.0013 T 23-10-2018 IPR000644 CBS domain DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 Pfam PF00571 CBS domain 272 323 1.6E-6 T 23-10-2018 IPR000644 CBS domain DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 SMART SM00116 277 325 0.041 T 23-10-2018 IPR000644 CBS domain DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 SMART SM00116 212 260 1.3 T 23-10-2018 IPR000644 CBS domain DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 Gene3D G3DSA:3.10.580.10 198 323 4.1E-42 T 23-10-2018 DLM_0260 c2f040a9e1bd5adf2c5db5fa11290ddb 326 Pfam PF01380 SIS domain 43 173 5.5E-32 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_0696 a38e2fcc9465a4bbd98c7c9067ab9da5 297 Gene3D G3DSA:3.20.20.70 1 296 3.1E-128 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0696 a38e2fcc9465a4bbd98c7c9067ab9da5 297 SUPERFAMILY SSF51569 2 289 1.28E-70 T 23-10-2018 DLM_0696 a38e2fcc9465a4bbd98c7c9067ab9da5 297 Pfam PF00682 HMGL-like 4 274 1.5E-54 T 23-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 SUPERFAMILY SSF46689 70 120 1.03E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 SMART SM00342 32 115 9.8E-23 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 99 115 7.6E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 84 99 7.6E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 Pfam PF06445 GyrI-like small molecule binding domain 132 287 3.0E-24 T 23-10-2018 IPR029442 GyrI-like small molecule binding domain DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 Gene3D G3DSA:3.20.80.10 132 289 1.1E-30 T 23-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 SMART SM00871 131 289 2.6E-23 T 23-10-2018 IPR010499 Bacterial transcription activator, effector binding DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 SUPERFAMILY SSF55136 133 280 1.57E-30 T 23-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 Gene3D G3DSA:1.10.10.60 14 67 2.4E-11 T 23-10-2018 DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 SUPERFAMILY SSF46689 15 66 1.97E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 Gene3D G3DSA:1.10.10.60 70 127 1.5E-10 T 23-10-2018 DLM_0467 31c9b1d212d954d5019517ba3e9a4fcb 290 Pfam PF12833 Helix-turn-helix domain 38 117 4.3E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 SUPERFAMILY SSF89550 6 264 8.44E-7 T 23-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 296 726 1.6E-168 T 23-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 Gene3D G3DSA:3.20.20.140 1 271 2.8E-80 T 23-10-2018 DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 SMART SM00481 7 74 4.3E-17 T 23-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 Pfam PF14579 Helix-hairpin-helix motif 802 890 3.9E-27 T 23-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 Pfam PF01336 OB-fold nucleic acid binding domain 984 1060 5.5E-7 T 23-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 Gene3D G3DSA:1.10.10.1600 435 513 9.6E-21 T 23-10-2018 DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1018 0.0 T 23-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_0838 356694fac6b76a0b9b785422c6f322ec 1144 Pfam PF02811 PHP domain 8 173 2.1E-40 T 23-10-2018 IPR004013 PHP domain GO:0003824 DLM_0605 ad201b4d923c9c646c5c5263277f2209 312 SUPERFAMILY SSF46785 185 309 3.01E-10 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0605 ad201b4d923c9c646c5c5263277f2209 312 SMART SM00903 19 162 1.4E-62 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DLM_0605 ad201b4d923c9c646c5c5263277f2209 312 Gene3D G3DSA:1.10.10.10 170 311 1.4E-11 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0605 ad201b4d923c9c646c5c5263277f2209 312 Gene3D G3DSA:2.30.110.10 2 169 5.3E-50 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DLM_0605 ad201b4d923c9c646c5c5263277f2209 312 SUPERFAMILY SSF50475 11 161 3.97E-48 T 23-10-2018 DLM_0605 ad201b4d923c9c646c5c5263277f2209 312 Pfam PF01613 Flavin reductase like domain 20 161 5.3E-34 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DLM_2041 18a14198e52394d6b2278288a600748d 268 Gene3D G3DSA:3.40.50.850 13 261 2.1E-40 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_2041 18a14198e52394d6b2278288a600748d 268 SUPERFAMILY SSF52499 11 259 5.36E-15 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_2041 18a14198e52394d6b2278288a600748d 268 Pfam PF00857 Isochorismatase family 15 260 3.8E-8 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 DLM_1588 8213d52fd83a529840459b3924ab663f 262 Pfam PF13503 Domain of unknown function (DUF4123) 33 152 4.2E-15 T 23-10-2018 IPR025391 Domain of unknown function DUF4123 DLM_1311 2effc2cc3ed391cb44116b2e7539ed71 386 Gene3D G3DSA:3.40.50.1820 123 384 8.8E-53 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1311 2effc2cc3ed391cb44116b2e7539ed71 386 Pfam PF00326 Prolyl oligopeptidase family 211 381 5.1E-11 T 23-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DLM_1311 2effc2cc3ed391cb44116b2e7539ed71 386 SUPERFAMILY SSF53474 8 384 3.44E-62 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1311 2effc2cc3ed391cb44116b2e7539ed71 386 Gene3D G3DSA:1.20.1440.110 7 121 6.1E-9 T 23-10-2018 DLM_2361 b1471e4a02e0c1f6d5fccde4d6bb9574 159 Pfam PF05233 PHB accumulation regulatory domain 42 81 5.6E-16 T 23-10-2018 IPR007897 PHB accumulation regulatory DLM_2361 b1471e4a02e0c1f6d5fccde4d6bb9574 159 Pfam PF05233 PHB accumulation regulatory domain 94 133 3.1E-14 T 23-10-2018 IPR007897 PHB accumulation regulatory DLM_2361 b1471e4a02e0c1f6d5fccde4d6bb9574 159 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 1 37 7.6E-12 T 23-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 Pfam PF00005 ABC transporter 20 168 7.0E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 Pfam PF00005 ABC transporter 271 425 4.5E-16 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 SUPERFAMILY SSF52540 265 484 8.98E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 SUPERFAMILY SSF52540 4 222 4.09E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 Gene3D G3DSA:3.40.50.300 1 242 6.0E-56 T 23-10-2018 DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 SMART SM00382 278 474 3.4E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 SMART SM00382 29 217 0.0019 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3585 961c9a2e953cf649f0d9b8802477f02c 497 Gene3D G3DSA:3.40.50.300 260 493 6.5E-43 T 23-10-2018 DLM_0825 0d5b9cc0142ae3442870d481feedad4b 200 Gene3D G3DSA:1.20.144.10 90 186 7.4E-15 T 23-10-2018 DLM_0825 0d5b9cc0142ae3442870d481feedad4b 200 Pfam PF01569 PAP2 superfamily 59 170 3.3E-17 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DLM_0825 0d5b9cc0142ae3442870d481feedad4b 200 SMART SM00014 59 167 6.0E-18 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DLM_0825 0d5b9cc0142ae3442870d481feedad4b 200 SUPERFAMILY SSF48317 24 175 1.7E-33 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DLM_1651 8f51b392e0f940886def8506bad25fde 649 Pfam PF04055 Radical SAM superfamily 381 542 9.7E-10 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_1651 8f51b392e0f940886def8506bad25fde 649 SUPERFAMILY SSF102114 356 546 3.92E-25 T 23-10-2018 DLM_1651 8f51b392e0f940886def8506bad25fde 649 Pfam PF02310 B12 binding domain 227 306 4.1E-7 T 23-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DLM_1651 8f51b392e0f940886def8506bad25fde 649 Gene3D G3DSA:3.80.30.20 376 559 1.6E-14 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DLM_1651 8f51b392e0f940886def8506bad25fde 649 SMART SM00729 378 591 1.1E-12 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_2836 d395a3ba371253044d8b0a92f14e9e47 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 5.9E-119 T 23-10-2018 IPR010263 Type VI secretion protein, VC_A0114 DLM_2836 d395a3ba371253044d8b0a92f14e9e47 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 447 4.3E-122 T 23-10-2018 IPR010263 Type VI secretion protein, VC_A0114 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 SUPERFAMILY SSF48150 3 208 2.36E-73 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 Gene3D G3DSA:1.10.1670.10 11 203 1.4E-78 T 23-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.3E-8 T 23-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 SMART SM00525 186 206 0.0011 T 23-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.589 T 23-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 SMART SM00478 38 185 5.4E-54 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 PIRSF PIRSF001435 1 209 5.9E-52 T 23-10-2018 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.6E-86 T 23-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 5.7E-19 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 6.6E-6 T 23-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DLM_0659 32e12258c2041a81fcb189dd13b3fa6e 210 Gene3D G3DSA:1.10.340.30 21 132 1.4E-78 T 23-10-2018 DLM_1965 1e501c489a83d548d1e62b92c24abae1 150 SUPERFAMILY SSF54637 11 146 3.56E-49 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_1965 1e501c489a83d548d1e62b92c24abae1 150 Pfam PF07977 FabA-like domain 17 142 2.2E-39 T 23-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DLM_1965 1e501c489a83d548d1e62b92c24abae1 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 35.859 T 23-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DLM_1965 1e501c489a83d548d1e62b92c24abae1 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 5.3E-62 T 23-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DLM_1965 1e501c489a83d548d1e62b92c24abae1 150 Gene3D G3DSA:3.10.129.10 2 150 4.1E-64 T 23-10-2018 DLM_3672 d067ef05ff1ac5e43c9eef629a14b124 249 Pfam PF13444 Acetyltransferase (GNAT) domain 32 132 8.4E-34 T 23-10-2018 DLM_3672 d067ef05ff1ac5e43c9eef629a14b124 249 SUPERFAMILY SSF55729 16 223 8.02E-44 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3672 d067ef05ff1ac5e43c9eef629a14b124 249 Gene3D G3DSA:3.40.630.30 14 170 6.8E-25 T 23-10-2018 DLM_4422 736514e42083bad368f3b86a6e9101e4 284 Pfam PF00571 CBS domain 62 118 6.0E-6 T 23-10-2018 IPR000644 CBS domain DLM_4422 736514e42083bad368f3b86a6e9101e4 284 Pfam PF00571 CBS domain 131 180 2.4E-6 T 23-10-2018 IPR000644 CBS domain DLM_4422 736514e42083bad368f3b86a6e9101e4 284 Pfam PF03471 Transporter associated domain 199 274 1.0E-19 T 23-10-2018 IPR005170 Transporter-associated domain DLM_4422 736514e42083bad368f3b86a6e9101e4 284 Gene3D G3DSA:3.10.580.10 41 188 1.0E-54 T 23-10-2018 DLM_4422 736514e42083bad368f3b86a6e9101e4 284 SUPERFAMILY SSF56176 195 281 1.96E-22 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_4422 736514e42083bad368f3b86a6e9101e4 284 Gene3D G3DSA:3.30.465.10 189 275 2.1E-29 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DLM_4422 736514e42083bad368f3b86a6e9101e4 284 SUPERFAMILY SSF54631 57 192 1.25E-31 T 23-10-2018 DLM_4422 736514e42083bad368f3b86a6e9101e4 284 SMART SM01091 197 275 3.3E-27 T 23-10-2018 IPR005170 Transporter-associated domain DLM_4422 736514e42083bad368f3b86a6e9101e4 284 SMART SM00116 70 119 0.15 T 23-10-2018 IPR000644 CBS domain DLM_4422 736514e42083bad368f3b86a6e9101e4 284 SMART SM00116 132 180 0.49 T 23-10-2018 IPR000644 CBS domain DLM_0680 39ac5c51dbcf6cd47a10622e47e695a3 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 204 2.9E-7 T 23-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DLM_0680 39ac5c51dbcf6cd47a10622e47e695a3 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 102.701 T 23-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 DLM_0680 39ac5c51dbcf6cd47a10622e47e695a3 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 233 4.5E-71 T 23-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 DLM_0680 39ac5c51dbcf6cd47a10622e47e695a3 240 SUPERFAMILY SSF56300 4 207 3.17E-26 T 23-10-2018 DLM_0680 39ac5c51dbcf6cd47a10622e47e695a3 240 Gene3D G3DSA:3.60.21.10 1 233 9.2E-13 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like DLM_0624 e0cd5f4053110d461097c2eeaccedbb5 234 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0624 e0cd5f4053110d461097c2eeaccedbb5 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 220 3.0E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0624 e0cd5f4053110d461097c2eeaccedbb5 234 SUPERFAMILY SSF46894 156 222 5.44E-16 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_0624 e0cd5f4053110d461097c2eeaccedbb5 234 SMART SM00421 165 222 3.4E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0624 e0cd5f4053110d461097c2eeaccedbb5 234 Gene3D G3DSA:1.10.10.10 44 233 1.0E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0624 e0cd5f4053110d461097c2eeaccedbb5 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 5.7E-9 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0624 e0cd5f4053110d461097c2eeaccedbb5 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 5.7E-9 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0624 e0cd5f4053110d461097c2eeaccedbb5 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 5.7E-9 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_0448 9568d2b4e6ef07f7802ec77f23f3ddab 255 Gene3D G3DSA:3.60.15.10 2 247 6.0E-31 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_0448 9568d2b4e6ef07f7802ec77f23f3ddab 255 SMART SM00849 17 198 1.3E-7 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_0448 9568d2b4e6ef07f7802ec77f23f3ddab 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 195 208 8.8E-9 T 23-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 DLM_0448 9568d2b4e6ef07f7802ec77f23f3ddab 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 81 102 8.8E-9 T 23-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 DLM_0448 9568d2b4e6ef07f7802ec77f23f3ddab 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 49 67 8.8E-9 T 23-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 DLM_0448 9568d2b4e6ef07f7802ec77f23f3ddab 255 Pfam PF12706 Beta-lactamase superfamily domain 26 213 7.5E-19 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_0448 9568d2b4e6ef07f7802ec77f23f3ddab 255 SUPERFAMILY SSF56281 1 234 2.99E-38 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3359 06cec916766d48ad193115327888ac4f 624 SMART SM00304 167 224 3.8E-4 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3359 06cec916766d48ad193115327888ac4f 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 445 605 2.2E-49 T 23-10-2018 IPR000160 GGDEF domain DLM_3359 06cec916766d48ad193115327888ac4f 624 SMART SM00267 434 609 5.5E-63 T 23-10-2018 IPR000160 GGDEF domain DLM_3359 06cec916766d48ad193115327888ac4f 624 SUPERFAMILY SSF55781 254 426 2.7E-14 T 23-10-2018 DLM_3359 06cec916766d48ad193115327888ac4f 624 SMART SM00065 275 428 0.0086 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_3359 06cec916766d48ad193115327888ac4f 624 Gene3D G3DSA:3.30.450.40 273 433 7.1E-16 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_3359 06cec916766d48ad193115327888ac4f 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 609 2.5E-51 T 23-10-2018 IPR000160 GGDEF domain DLM_3359 06cec916766d48ad193115327888ac4f 624 Gene3D G3DSA:3.30.70.270 434 611 3.0E-59 T 23-10-2018 DLM_3359 06cec916766d48ad193115327888ac4f 624 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 45 137 8.8E-8 T 23-10-2018 IPR033414 Periplasmic sensor domain DLM_3359 06cec916766d48ad193115327888ac4f 624 SUPERFAMILY SSF55073 450 609 8.63E-49 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3553 78ba4e03bf8a2c19c78968ec639253a6 409 SUPERFAMILY SSF103473 16 402 1.16E-55 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3553 78ba4e03bf8a2c19c78968ec639253a6 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 272 289 2.3E-5 T 23-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DLM_3553 78ba4e03bf8a2c19c78968ec639253a6 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 309 332 2.3E-5 T 23-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DLM_3553 78ba4e03bf8a2c19c78968ec639253a6 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 69 87 2.3E-5 T 23-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DLM_3553 78ba4e03bf8a2c19c78968ec639253a6 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 116 134 2.3E-5 T 23-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DLM_3553 78ba4e03bf8a2c19c78968ec639253a6 409 Pfam PF07690 Major Facilitator Superfamily 34 267 3.9E-23 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_3553 78ba4e03bf8a2c19c78968ec639253a6 409 Gene3D G3DSA:1.20.1250.20 22 208 3.5E-20 T 23-10-2018 DLM_3553 78ba4e03bf8a2c19c78968ec639253a6 409 Gene3D G3DSA:1.20.1250.20 228 408 2.1E-21 T 23-10-2018 DLM_2691 09c0886b327de90b520587980a937888 70 Gene3D G3DSA:1.20.120.910 2 69 1.8E-20 T 23-10-2018 DLM_2691 09c0886b327de90b520587980a937888 70 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 32 66 4.9E-14 T 23-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DLM_2691 09c0886b327de90b520587980a937888 70 SUPERFAMILY SSF57716 33 68 4.85E-8 T 23-10-2018 DLM_2691 09c0886b327de90b520587980a937888 70 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 36 60 - T 23-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DLM_2691 09c0886b327de90b520587980a937888 70 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 65 2.2E-23 T 23-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type DLM_2307 0f6a5db14768e5a07391ae74f28e58e0 177 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 17.483 T 23-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DLM_2307 0f6a5db14768e5a07391ae74f28e58e0 177 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 1.6E-50 T 23-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DLM_2307 0f6a5db14768e5a07391ae74f28e58e0 177 Pfam PF04279 Intracellular septation protein A 1 175 5.2E-58 T 23-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DLM_4516 27a6bdf0d9bc7880fa3278705c68ddc7 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_4516 27a6bdf0d9bc7880fa3278705c68ddc7 486 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 1.6E-222 T 23-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 DLM_4516 27a6bdf0d9bc7880fa3278705c68ddc7 486 SUPERFAMILY SSF53720 6 482 6.41E-174 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_4516 27a6bdf0d9bc7880fa3278705c68ddc7 486 Gene3D G3DSA:3.40.605.10 20 474 7.4E-185 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_4516 27a6bdf0d9bc7880fa3278705c68ddc7 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_4516 27a6bdf0d9bc7880fa3278705c68ddc7 486 Pfam PF00171 Aldehyde dehydrogenase family 20 479 4.4E-172 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_4516 27a6bdf0d9bc7880fa3278705c68ddc7 486 Gene3D G3DSA:3.40.309.10 262 451 7.4E-185 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_3752 f708928cb8688dd1274f6fda10a2ff55 336 SUPERFAMILY SSF53697 29 334 4.58E-68 T 23-10-2018 DLM_3752 f708928cb8688dd1274f6fda10a2ff55 336 Gene3D G3DSA:3.40.50.10490 190 321 1.4E-41 T 23-10-2018 DLM_3752 f708928cb8688dd1274f6fda10a2ff55 336 Pfam PF01380 SIS domain 39 158 1.3E-14 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_3752 f708928cb8688dd1274f6fda10a2ff55 336 Pfam PF01380 SIS domain 194 277 2.5E-14 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_3752 f708928cb8688dd1274f6fda10a2ff55 336 Gene3D G3DSA:3.40.50.10490 26 185 3.6E-37 T 23-10-2018 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 Gene3D G3DSA:1.20.120.350 3 139 2.0E-25 T 23-10-2018 IPR027359 Voltage-dependent channel domain superfamily DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 PRINTS PR00169 Potassium channel signature 127 153 7.6E-34 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 PRINTS PR00169 Potassium channel signature 156 179 7.6E-34 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 PRINTS PR00169 Potassium channel signature 185 207 7.6E-34 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 PRINTS PR00169 Potassium channel signature 23 51 7.6E-34 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 PRINTS PR00169 Potassium channel signature 214 240 7.6E-34 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 PRINTS PR00169 Potassium channel signature 65 88 7.6E-34 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 PRINTS PR00169 Potassium channel signature 91 111 7.6E-34 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 Gene3D G3DSA:1.10.287.70 140 248 1.0E-28 T 23-10-2018 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 Pfam PF00520 Ion transport protein 31 245 1.4E-29 T 23-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 DLM_0488 6b9f38ea3982df87b7abd75c8255036b 287 SUPERFAMILY SSF81324 29 241 1.28E-51 T 23-10-2018 DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 Gene3D G3DSA:3.40.50.720 2 250 5.0E-63 T 23-10-2018 DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 SUPERFAMILY SSF51735 4 232 2.9E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 9.1E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 9.1E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.1E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 9.1E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 9.1E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.9E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.9E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.9E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1216 f41da68f6af9392316f82d6a238d1f73 268 Pfam PF00106 short chain dehydrogenase 5 186 1.1E-51 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 73 91 - T 23-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 SUPERFAMILY SSF51419 41 312 1.0E-60 T 23-10-2018 IPR029066 PLP-binding barrel DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 Gene3D G3DSA:2.40.37.10 29 454 7.4E-114 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 Gene3D G3DSA:3.20.20.10 49 310 7.4E-114 T 23-10-2018 IPR029066 PLP-binding barrel DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 310 414 3.8E-10 T 23-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 SUPERFAMILY SSF50621 286 457 5.86E-29 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 300 319 1.0E-13 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 205 218 1.0E-13 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 73 91 1.0E-13 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 93 105 1.0E-13 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 414 427 1.0E-13 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 PRINTS PR01181 Diaminopimelate decarboxylase signature 91 108 4.0E-5 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 PRINTS PR01181 Diaminopimelate decarboxylase signature 424 446 4.0E-5 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 22 457 3.7E-91 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_1427 ebfce9c5f3622d703e3580e62b75961f 461 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 51 309 9.7E-44 T 23-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DLM_0608 9921de6df3d61042bd57a48c4134aac9 447 Pfam PF07690 Major Facilitator Superfamily 42 404 4.6E-47 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_0608 9921de6df3d61042bd57a48c4134aac9 447 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 30 431 4.1E-191 T 23-10-2018 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 DLM_0608 9921de6df3d61042bd57a48c4134aac9 447 Gene3D G3DSA:1.20.1250.20 12 447 5.8E-76 T 23-10-2018 DLM_0608 9921de6df3d61042bd57a48c4134aac9 447 SUPERFAMILY SSF103473 20 442 7.85E-82 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0517 f3bf42438fa93c937a20839ab1cc1b68 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-18 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0517 f3bf42438fa93c937a20839ab1cc1b68 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 1.0E-18 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0517 f3bf42438fa93c937a20839ab1cc1b68 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 1.0E-18 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0517 f3bf42438fa93c937a20839ab1cc1b68 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.0E-18 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0517 f3bf42438fa93c937a20839ab1cc1b68 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.0E-18 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0517 f3bf42438fa93c937a20839ab1cc1b68 277 SUPERFAMILY SSF51735 3 266 1.66E-40 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0517 f3bf42438fa93c937a20839ab1cc1b68 277 Pfam PF00106 short chain dehydrogenase 5 133 1.1E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0517 f3bf42438fa93c937a20839ab1cc1b68 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 158 264 1.3E-19 T 23-10-2018 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 78 91 - T 23-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR01959 SuhB family inositol monophosphatase signature 195 207 2.5E-28 T 23-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR01959 SuhB family inositol monophosphatase signature 101 120 2.5E-28 T 23-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR01959 SuhB family inositol monophosphatase signature 153 179 2.5E-28 T 23-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR01959 SuhB family inositol monophosphatase signature 14 36 2.5E-28 T 23-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 Pfam PF00459 Inositol monophosphatase family 1 254 1.3E-72 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 57 73 2.7E-55 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 2.7E-55 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 2.7E-55 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 2.7E-55 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 78 94 2.7E-55 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 127 150 2.7E-55 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 Gene3D G3DSA:3.40.190.80 138 259 9.2E-40 T 23-10-2018 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 SUPERFAMILY SSF56655 1 258 1.13E-87 T 23-10-2018 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 Gene3D G3DSA:3.30.540.10 1 137 1.5E-50 T 23-10-2018 DLM_3285 addd3f4a42fe8f6da108ff6aed9882f7 260 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 208 222 - T 23-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 3.8E-10 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 3.8E-10 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 375 3.8E-10 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 SUPERFAMILY SSF55874 289 435 4.06E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 SUPERFAMILY SSF158472 177 225 2.22E-7 T 23-10-2018 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 287 2.3E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 SUPERFAMILY SSF47384 213 287 2.16E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 SMART SM00388 230 288 2.0E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 Gene3D G3DSA:1.10.287.130 176 283 3.0E-21 T 23-10-2018 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 SMART SM00387 326 435 5.0E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 Gene3D G3DSA:3.30.565.10 289 439 1.0E-30 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 434 6.6E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 SMART SM00304 177 229 1.7E-10 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3872 1e053712a09f3a82326e3ff99edccca4 440 Pfam PF00672 HAMP domain 177 224 3.0E-10 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2564 dd6c5177bec80a119b46ff516bff8de5 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 3.9E-146 T 23-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 DLM_2564 dd6c5177bec80a119b46ff516bff8de5 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 2.0E-150 T 23-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 DLM_2564 dd6c5177bec80a119b46ff516bff8de5 344 Gene3D G3DSA:3.40.630.30 1 272 1.0E-122 T 23-10-2018 DLM_2564 dd6c5177bec80a119b46ff516bff8de5 344 SUPERFAMILY SSF55729 1 338 8.74E-135 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_2564 dd6c5177bec80a119b46ff516bff8de5 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 2.5E-162 T 23-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 DLM_2564 dd6c5177bec80a119b46ff516bff8de5 344 Gene3D G3DSA:2.40.40.20 273 339 1.7E-7 T 23-10-2018 DLM_0647 aa0597491ccdd82bec97e0c94f5876ac 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 431 4.4E-90 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DLM_0647 aa0597491ccdd82bec97e0c94f5876ac 465 Pfam PF01554 MatE 26 185 6.2E-29 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DLM_0647 aa0597491ccdd82bec97e0c94f5876ac 465 Pfam PF01554 MatE 253 412 9.1E-31 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DLM_0647 aa0597491ccdd82bec97e0c94f5876ac 465 PIRSF PIRSF006603 15 462 6.1E-64 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DLM_1981 8c6acd18b06d0dc052ab33ad250b0e25 373 SUPERFAMILY SSF55931 2 367 5.17E-108 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DLM_1981 8c6acd18b06d0dc052ab33ad250b0e25 373 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 373 87.454 T 23-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DLM_1981 8c6acd18b06d0dc052ab33ad250b0e25 373 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 12 270 1.7E-49 T 23-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DLM_1981 8c6acd18b06d0dc052ab33ad250b0e25 373 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 11 295 2.2E-86 T 23-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DLM_1981 8c6acd18b06d0dc052ab33ad250b0e25 373 Gene3D G3DSA:3.30.590.20 3 370 1.8E-98 T 23-10-2018 DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.9E-47 T 23-10-2018 IPR014036 DeoR C-terminal sensor domain DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.8E-19 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 SMART SM00420 6 58 1.2E-20 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.0E-11 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.0E-11 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 SMART SM01134 72 234 4.0E-61 T 23-10-2018 DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 Gene3D G3DSA:1.10.10.10 1 53 5.4E-8 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 Gene3D G3DSA:3.30.750.70 70 153 3.8E-5 T 23-10-2018 DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 SUPERFAMILY SSF46785 4 71 6.0E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4133 db22c4da77d6045fba3f56ddfce89ea7 256 SUPERFAMILY SSF100950 75 234 4.5E-23 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 427 510 1.6E-27 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 SUPERFAMILY SSF142019 96 334 5.62E-84 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 SMART SM00928 425 471 6.8E-14 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 Gene3D G3DSA:1.20.1440.230 424 519 2.5E-23 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 263 278 - T 23-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 Gene3D G3DSA:3.40.50.11540 149 327 1.5E-74 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 438 449 - T 23-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 SUPERFAMILY SSF140490 423 510 9.94E-25 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 145 315 2.0E-45 T 23-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 Gene3D G3DSA:3.10.20.600 328 422 1.0E-24 T 23-10-2018 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 SUPERFAMILY SSF142984 339 420 5.75E-21 T 23-10-2018 DLM_3240 a0ad053ef3575a3b963bd7628028017c 519 SUPERFAMILY SSF52833 4 78 7.6E-5 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_1802 456e5a3bbeb1974dbcc59402986ed0cc 398 SUPERFAMILY SSF53822 43 387 2.04E-95 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1802 456e5a3bbeb1974dbcc59402986ed0cc 398 Pfam PF13458 Periplasmic binding protein 43 384 1.0E-63 T 23-10-2018 IPR028081 Leucine-binding protein domain DLM_1802 456e5a3bbeb1974dbcc59402986ed0cc 398 Gene3D G3DSA:3.40.50.2300 44 365 1.6E-102 T 23-10-2018 DLM_1802 456e5a3bbeb1974dbcc59402986ed0cc 398 Gene3D G3DSA:3.40.50.2300 164 292 1.6E-102 T 23-10-2018 DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.8E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 23 1.8E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.8E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 SMART SM00304 209 262 2.6E-5 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 505 1.5E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 Gene3D G3DSA:1.10.287.950 209 539 7.9E-70 T 23-10-2018 DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 182 2.4E-24 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 SUPERFAMILY SSF58104 230 539 1.22E-71 T 23-10-2018 DLM_1841 ae8a3b30f9bfda8139150c7628563bcb 539 SMART SM00283 277 538 1.6E-58 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3503 c7d65166afb0a2653123dbef8a6f4691 322 Pfam PF00348 Polyprenyl synthetase 31 263 3.4E-74 T 23-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DLM_3503 c7d65166afb0a2653123dbef8a6f4691 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site DLM_3503 c7d65166afb0a2653123dbef8a6f4691 322 SUPERFAMILY SSF48576 7 321 1.2E-97 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily DLM_3503 c7d65166afb0a2653123dbef8a6f4691 322 Gene3D G3DSA:1.10.600.10 2 322 1.1E-111 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily DLM_3503 c7d65166afb0a2653123dbef8a6f4691 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site DLM_0640 d5d50b4ff93f25ee89813d9954b873a4 201 Gene3D G3DSA:3.90.79.10 31 197 4.7E-50 T 23-10-2018 DLM_0640 d5d50b4ff93f25ee89813d9954b873a4 201 SUPERFAMILY SSF55811 37 195 1.19E-35 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_0640 d5d50b4ff93f25ee89813d9954b873a4 201 Pfam PF00293 NUDIX domain 39 156 6.2E-14 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_4134 c90ea220fa018af726629a8a836db4a3 532 SUPERFAMILY SSF55073 373 528 9.42E-47 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4134 c90ea220fa018af726629a8a836db4a3 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 524 1.9E-45 T 23-10-2018 IPR000160 GGDEF domain DLM_4134 c90ea220fa018af726629a8a836db4a3 532 Pfam PF00072 Response regulator receiver domain 243 353 6.0E-20 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4134 c90ea220fa018af726629a8a836db4a3 532 Gene3D G3DSA:3.40.50.2300 234 362 1.2E-26 T 23-10-2018 DLM_4134 c90ea220fa018af726629a8a836db4a3 532 SMART SM00267 357 528 5.2E-55 T 23-10-2018 IPR000160 GGDEF domain DLM_4134 c90ea220fa018af726629a8a836db4a3 532 SUPERFAMILY SSF52172 125 230 4.55E-5 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4134 c90ea220fa018af726629a8a836db4a3 532 SMART SM00448 241 354 1.2E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4134 c90ea220fa018af726629a8a836db4a3 532 Gene3D G3DSA:3.30.70.270 363 531 1.4E-54 T 23-10-2018 DLM_4134 c90ea220fa018af726629a8a836db4a3 532 SUPERFAMILY SSF52172 239 373 1.85E-28 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4134 c90ea220fa018af726629a8a836db4a3 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 367 527 3.7E-53 T 23-10-2018 IPR000160 GGDEF domain DLM_2507 2571796938ed96ec2cc4c77614f37dc3 485 SMART SM00345 10 69 9.8E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2507 2571796938ed96ec2cc4c77614f37dc3 485 SUPERFAMILY SSF46785 2 77 1.92E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2507 2571796938ed96ec2cc4c77614f37dc3 485 Pfam PF00155 Aminotransferase class I and II 140 462 2.2E-29 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_2507 2571796938ed96ec2cc4c77614f37dc3 485 Gene3D G3DSA:1.10.10.10 1 70 5.2E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2507 2571796938ed96ec2cc4c77614f37dc3 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 8.3E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2507 2571796938ed96ec2cc4c77614f37dc3 485 Gene3D G3DSA:3.90.1150.10 96 466 2.7E-95 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2507 2571796938ed96ec2cc4c77614f37dc3 485 SUPERFAMILY SSF53383 95 468 8.7E-86 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2507 2571796938ed96ec2cc4c77614f37dc3 485 Gene3D G3DSA:3.40.640.10 144 362 2.7E-95 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2762 bc1ee726e6f852a08fe1e3eea9e44aa0 86 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 10 81 3.4E-10 T 23-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DLM_1215 67231000d080f458bbea7574aebcd846 484 Pfam PF07690 Major Facilitator Superfamily 38 433 1.1E-50 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1215 67231000d080f458bbea7574aebcd846 484 SUPERFAMILY SSF103473 22 475 1.7E-65 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1215 67231000d080f458bbea7574aebcd846 484 Gene3D G3DSA:1.20.1250.20 281 477 4.4E-16 T 23-10-2018 DLM_1215 67231000d080f458bbea7574aebcd846 484 Gene3D G3DSA:1.20.1720.10 34 269 3.8E-42 T 23-10-2018 DLM_1923 3bd04f705a61c4ecfcd68cf7c3461456 105 SUPERFAMILY SSF50022 6 105 1.23E-35 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_1923 3bd04f705a61c4ecfcd68cf7c3461456 105 Pfam PF13806 Rieske-like [2Fe-2S] domain 6 102 1.1E-16 T 23-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DLM_1923 3bd04f705a61c4ecfcd68cf7c3461456 105 Gene3D G3DSA:2.102.10.10 1 104 5.6E-29 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_1923 3bd04f705a61c4ecfcd68cf7c3461456 105 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 7 103 5.2E-30 T 23-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 SUPERFAMILY SSF52540 3 171 3.81E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 PIRSF PIRSF006485 1 438 6.9E-172 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 Gene3D G3DSA:3.40.50.300 170 347 9.6E-47 T 23-10-2018 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 SUPERFAMILY SSF52540 138 436 3.42E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 Gene3D G3DSA:3.30.300.20 350 432 1.7E-18 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 8.3E-10 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 8.3E-10 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 159 8.5E-18 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 340 3.6E-25 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 Pfam PF01926 50S ribosome-binding GTPase 5 120 4.5E-26 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 Pfam PF01926 50S ribosome-binding GTPase 177 294 8.0E-23 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 430 1.6E-170 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 351 430 2.0E-23 T 23-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 Hamap MF_00195 GTPase Der [der]. 2 433 37.565 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 SMART SM00382 173 321 1.2 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 SMART SM00382 1 142 0.0016 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0573 f021fb4f8c2ee2b484537ee80eeb5b62 470 Gene3D G3DSA:3.40.50.300 4 169 1.9E-41 T 23-10-2018 DLM_0168 5a88c8b9001fab54628aab8c16f7a64e 143 Pfam PF01220 Dehydroquinase class II 1 135 4.1E-58 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_0168 5a88c8b9001fab54628aab8c16f7a64e 143 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 143 69.565 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_0168 5a88c8b9001fab54628aab8c16f7a64e 143 Gene3D G3DSA:3.40.50.9100 1 143 1.1E-61 T 23-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_0168 5a88c8b9001fab54628aab8c16f7a64e 143 SUPERFAMILY SSF52304 1 140 6.02E-59 T 23-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_0168 5a88c8b9001fab54628aab8c16f7a64e 143 ProSitePatterns PS01029 Dehydroquinase class II signature. 2 19 - T 23-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_0168 5a88c8b9001fab54628aab8c16f7a64e 143 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 1 137 1.5E-57 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_0168 5a88c8b9001fab54628aab8c16f7a64e 143 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 1 132 2.0E-63 T 23-10-2018 DLM_0168 5a88c8b9001fab54628aab8c16f7a64e 143 PIRSF PIRSF001399 1 142 3.4E-55 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_4460 8b4999967d2e002afef78b6a5457c247 627 SUPERFAMILY SSF53335 110 328 1.83E-23 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4460 8b4999967d2e002afef78b6a5457c247 627 Gene3D G3DSA:3.40.50.720 143 265 2.3E-30 T 23-10-2018 DLM_4460 8b4999967d2e002afef78b6a5457c247 627 Gene3D G3DSA:3.40.50.720 279 614 1.1E-112 T 23-10-2018 DLM_4460 8b4999967d2e002afef78b6a5457c247 627 Pfam PF13727 CoA-binding domain 67 236 6.3E-8 T 23-10-2018 DLM_4460 8b4999967d2e002afef78b6a5457c247 627 Pfam PF02719 Polysaccharide biosynthesis protein 284 573 1.7E-123 T 23-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DLM_4460 8b4999967d2e002afef78b6a5457c247 627 SUPERFAMILY SSF51735 282 552 9.5E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0367 72f13cfad7600c97d7144daacd877c7d 199 SUPERFAMILY SSF54637 47 192 4.14E-43 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_0367 72f13cfad7600c97d7144daacd877c7d 199 Gene3D G3DSA:3.10.129.10 36 196 3.1E-59 T 23-10-2018 DLM_0367 72f13cfad7600c97d7144daacd877c7d 199 Pfam PF03061 Thioesterase superfamily 66 139 5.4E-17 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DLM_3433 133f7051fff563442f3afdef84350e04 144 Pfam PF02036 SCP-2 sterol transfer family 42 129 1.2E-14 T 23-10-2018 IPR003033 SCP2 sterol-binding domain DLM_3433 133f7051fff563442f3afdef84350e04 144 Gene3D G3DSA:3.30.1050.10 44 136 1.4E-5 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DLM_3433 133f7051fff563442f3afdef84350e04 144 SUPERFAMILY SSF55718 42 133 2.83E-18 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 SUPERFAMILY SSF55681 116 421 3.87E-101 T 23-10-2018 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.5E-33 T 23-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 Gene3D G3DSA:3.30.930.10 105 427 2.2E-116 T 23-10-2018 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 SUPERFAMILY SSF46589 1 112 1.41E-31 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 PIRSF PIRSF001529 1 427 6.0E-184 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 PRINTS PR00981 Seryl-tRNA synthetase signature 355 371 8.0E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 PRINTS PR00981 Seryl-tRNA synthetase signature 320 333 8.0E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 PRINTS PR00981 Seryl-tRNA synthetase signature 337 353 8.0E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 PRINTS PR00981 Seryl-tRNA synthetase signature 280 293 8.0E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 PRINTS PR00981 Seryl-tRNA synthetase signature 268 280 8.0E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 Gene3D G3DSA:1.10.287.40 1 104 6.1E-24 T 23-10-2018 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 403 3.0E-35 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 425 39.983 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DLM_1187 6c63717bde3bf75b1441aae78d6923c5 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 420 4.3E-169 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DLM_3148 b958dd3cbfc74929a7f4941d0eda5d4a 102 Pfam PF04341 Protein of unknown function, DUF485 11 97 8.5E-34 T 23-10-2018 IPR007436 Protein of unknown function DUF485 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 305 5.2E-33 T 23-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 SUPERFAMILY SSF56770 44 307 1.02E-89 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 Gene3D G3DSA:4.10.480.10 226 336 1.3E-48 T 23-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 Gene3D G3DSA:3.40.50.700 43 223 9.5E-71 T 23-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 9.9E-29 T 23-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 353 5.7E-174 T 23-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 281 294 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 1.6E-122 T 23-10-2018 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 PIRSF PIRSF000310 2 354 3.5E-144 T 23-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 DLM_2321 55a826d3fa0545c7bc3bdf5be6ed0bd1 374 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 40 8.7E-6 T 23-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DLM_1726 e2e703c1416b3dd8c8f1dbc38068a285 277 Gene3D G3DSA:3.20.20.450 23 273 7.5E-54 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1726 e2e703c1416b3dd8c8f1dbc38068a285 277 Pfam PF00563 EAL domain 39 263 1.0E-43 T 23-10-2018 IPR001633 EAL domain DLM_1726 e2e703c1416b3dd8c8f1dbc38068a285 277 SMART SM00052 18 268 1.8E-23 T 23-10-2018 IPR001633 EAL domain DLM_1726 e2e703c1416b3dd8c8f1dbc38068a285 277 SUPERFAMILY SSF141868 40 264 4.84E-53 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 SUPERFAMILY SSF54292 1 123 2.76E-33 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 122 3.7E-16 T 23-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 SUPERFAMILY SSF54862 143 203 9.63E-6 T 23-10-2018 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.0E-21 T 23-10-2018 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 SMART SM00929 83 123 1.3E-19 T 23-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 Gene3D G3DSA:3.10.20.740 1 123 2.0E-42 T 23-10-2018 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 Gene3D G3DSA:3.40.50.740 282 345 2.6E-19 T 23-10-2018 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 Gene3D G3DSA:3.40.50.740 443 670 2.8E-16 T 23-10-2018 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 638 1.9E-200 T 23-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 Gene3D G3DSA:3.30.70.20 125 205 6.4E-6 T 23-10-2018 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 Pfam PF00384 Molybdopterin oxidoreductase 273 639 5.3E-37 T 23-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 SUPERFAMILY SSF53706 214 663 1.08E-87 T 23-10-2018 DLM_0055 0ae0db3ae978bca37fffbb0f0ce8646e 784 Gene3D G3DSA:3.40.228.10 346 436 2.6E-19 T 23-10-2018 DLM_2442 48b341db7c377cb8bb90f936ba460a40 260 Pfam PF00460 Flagella basal body rod protein 5 35 1.9E-11 T 23-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DLM_2442 48b341db7c377cb8bb90f936ba460a40 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DLM_2442 48b341db7c377cb8bb90f936ba460a40 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 3.8E-28 T 23-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DLM_2442 48b341db7c377cb8bb90f936ba460a40 260 SUPERFAMILY SSF117143 92 222 3.14E-35 T 23-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DLM_2442 48b341db7c377cb8bb90f936ba460a40 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 8.0E-31 T 23-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DLM_2442 48b341db7c377cb8bb90f936ba460a40 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 137 8.2E-46 T 23-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DLM_2442 48b341db7c377cb8bb90f936ba460a40 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 1.8E-106 T 23-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 Pfam PF00581 Rhodanese-like domain 8 127 1.1E-16 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 Pfam PF00581 Rhodanese-like domain 156 270 4.9E-8 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 SMART SM00450 6 131 3.8E-20 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 SMART SM00450 154 274 2.4E-10 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 ProSitePatterns PS00380 Rhodanese signature 1. 38 49 - T 23-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 SUPERFAMILY SSF52821 2 146 2.49E-38 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 Gene3D G3DSA:3.40.250.10 158 278 7.5E-33 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 Gene3D G3DSA:3.40.250.10 1 148 9.0E-43 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_4339 80e191da52ec0c39a84fa6360aed402b 278 SUPERFAMILY SSF52821 158 277 2.1E-31 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_2029 a8dbdda198f38231b60f424e50b83c58 314 PIRSF PIRSF000441 135 305 1.7E-53 T 23-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DLM_2029 a8dbdda198f38231b60f424e50b83c58 314 Gene3D G3DSA:2.160.10.10 202 311 3.9E-28 T 23-10-2018 DLM_2029 a8dbdda198f38231b60f424e50b83c58 314 Gene3D G3DSA:1.10.3130.10 47 201 3.1E-45 T 23-10-2018 DLM_2029 a8dbdda198f38231b60f424e50b83c58 314 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 261 295 4.9E-6 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_2029 a8dbdda198f38231b60f424e50b83c58 314 SUPERFAMILY SSF51161 124 302 4.02E-44 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 Gene3D G3DSA:3.30.420.40 353 398 1.7E-16 T 23-10-2018 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 Gene3D G3DSA:3.30.420.40 178 221 2.0E-37 T 23-10-2018 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 PRINTS PR00301 70kDa heat shock protein signature 124 144 2.3E-6 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 PRINTS PR00301 70kDa heat shock protein signature 8 21 2.3E-6 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 PRINTS PR00301 70kDa heat shock protein signature 190 200 2.3E-6 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 PRINTS PR00301 70kDa heat shock protein signature 36 48 2.3E-6 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 Gene3D G3DSA:3.90.640.10 222 231 2.0E-37 T 23-10-2018 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 Gene3D G3DSA:3.90.640.10 299 352 1.7E-16 T 23-10-2018 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 184 197 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 Pfam PF00012 Hsp70 protein 92 233 2.4E-10 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 Pfam PF00012 Hsp70 protein 300 394 9.3E-12 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 SUPERFAMILY SSF53067 10 175 9.81E-30 T 23-10-2018 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 374 388 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 SUPERFAMILY SSF53067 179 416 6.79E-37 T 23-10-2018 DLM_1995 2d60f28d3c21a9c7a35183c68117afd3 421 Gene3D G3DSA:3.30.420.40 11 177 2.0E-37 T 23-10-2018 DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 PIRSF PIRSF000441 75 260 1.1E-64 T 23-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.1E-73 T 23-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.3E-40 T 23-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 Gene3D G3DSA:2.160.10.10 143 258 4.4E-39 T 23-10-2018 DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 SMART SM00971 9 113 1.8E-57 T 23-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 SUPERFAMILY SSF51161 7 244 1.39E-67 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 8.1E-8 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 184 0.0016 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_4258 2f19e26cd490c1817d8a9a3c5d42ade2 261 Gene3D G3DSA:1.10.3130.10 1 141 3.4E-56 T 23-10-2018 DLM_3668 e082abb2287d90d4b230c51446c7e2f6 266 Gene3D G3DSA:1.10.10.2830 84 197 4.4E-37 T 23-10-2018 DLM_3668 e082abb2287d90d4b230c51446c7e2f6 266 Gene3D G3DSA:3.90.1530.30 20 83 1.2E-26 T 23-10-2018 DLM_3668 e082abb2287d90d4b230c51446c7e2f6 266 SUPERFAMILY SSF109709 89 198 1.44E-33 T 23-10-2018 DLM_3668 e082abb2287d90d4b230c51446c7e2f6 266 Pfam PF02195 ParB-like nuclease domain 9 97 9.2E-27 T 23-10-2018 IPR003115 ParB/Sulfiredoxin DLM_3668 e082abb2287d90d4b230c51446c7e2f6 266 SUPERFAMILY SSF110849 7 99 5.75E-29 T 23-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DLM_3668 e082abb2287d90d4b230c51446c7e2f6 266 SMART SM00470 7 97 3.3E-35 T 23-10-2018 IPR003115 ParB/Sulfiredoxin DLM_3668 e082abb2287d90d4b230c51446c7e2f6 266 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 6 177 1.2E-56 T 23-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DLM_2978 72d06d53e5701895a0485e3ee2c53dbb 321 Pfam PF16074 Type IV Pilus-assembly protein W 215 309 1.4E-10 T 23-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 DLM_2978 72d06d53e5701895a0485e3ee2c53dbb 321 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 19 0.0014 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_2978 72d06d53e5701895a0485e3ee2c53dbb 321 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_2978 72d06d53e5701895a0485e3ee2c53dbb 321 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.3E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3812 e05863f622ea614b9f3cf0fe35e541cb 289 Gene3D G3DSA:3.30.70.1070 187 249 3.9E-6 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_3812 e05863f622ea614b9f3cf0fe35e541cb 289 SUPERFAMILY SSF110997 177 247 1.74E-6 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_3812 e05863f622ea614b9f3cf0fe35e541cb 289 Pfam PF05036 Sporulation related domain 177 247 5.0E-5 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 DLM_0753 6dc16ee5b8b3798011a6141b2343a028 359 SUPERFAMILY SSF52151 41 323 9.94E-14 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DLM_3155 22f8224567889495c8156305bf37d285 203 Gene3D G3DSA:3.40.50.720 1 198 8.0E-37 T 23-10-2018 DLM_3155 22f8224567889495c8156305bf37d285 203 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 36 180 1.0E-14 T 23-10-2018 DLM_3155 22f8224567889495c8156305bf37d285 203 SUPERFAMILY SSF51735 1 192 2.62E-26 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3155 22f8224567889495c8156305bf37d285 203 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 5.2E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3155 22f8224567889495c8156305bf37d285 203 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 5.2E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3155 22f8224567889495c8156305bf37d285 203 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 5.2E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2608 d7da76114a90bcf9a4dc2bb2ec0ba049 157 Pfam PF00293 NUDIX domain 19 114 5.7E-9 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_2608 d7da76114a90bcf9a4dc2bb2ec0ba049 157 Gene3D G3DSA:3.90.79.10 5 157 4.9E-42 T 23-10-2018 DLM_2608 d7da76114a90bcf9a4dc2bb2ec0ba049 157 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_2608 d7da76114a90bcf9a4dc2bb2ec0ba049 157 SUPERFAMILY SSF55811 20 131 2.03E-15 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_2608 d7da76114a90bcf9a4dc2bb2ec0ba049 157 PRINTS PR00502 NUDIX hydrolase family signature 41 55 6.2E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DLM_2608 d7da76114a90bcf9a4dc2bb2ec0ba049 157 PRINTS PR00502 NUDIX hydrolase family signature 55 70 6.2E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DLM_0947 59cea91219ac7becff76fdf61f0c1162 489 Gene3D G3DSA:1.10.10.10 13 81 2.1E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0947 59cea91219ac7becff76fdf61f0c1162 489 Gene3D G3DSA:3.90.1150.10 109 477 1.2E-91 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0947 59cea91219ac7becff76fdf61f0c1162 489 Gene3D G3DSA:3.40.640.10 156 374 1.2E-91 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0947 59cea91219ac7becff76fdf61f0c1162 489 SMART SM00345 20 79 8.5E-11 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0947 59cea91219ac7becff76fdf61f0c1162 489 SUPERFAMILY SSF53383 73 479 2.29E-81 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0947 59cea91219ac7becff76fdf61f0c1162 489 SUPERFAMILY SSF46785 12 82 8.95E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0947 59cea91219ac7becff76fdf61f0c1162 489 Pfam PF00155 Aminotransferase class I and II 151 461 6.4E-23 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_0947 59cea91219ac7becff76fdf61f0c1162 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 1.2E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2750 7d37b2d4ef970281aef23c716129557b 520 SUPERFAMILY SSF51004 109 512 6.15E-74 T 23-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DLM_2750 7d37b2d4ef970281aef23c716129557b 520 Gene3D G3DSA:1.10.760.10 13 106 9.0E-21 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2750 7d37b2d4ef970281aef23c716129557b 520 SUPERFAMILY SSF46626 4 109 9.03E-21 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2750 7d37b2d4ef970281aef23c716129557b 520 Gene3D G3DSA:2.140.10.20 107 515 1.9E-107 T 23-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily DLM_2750 7d37b2d4ef970281aef23c716129557b 520 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 29 99 6.6E-13 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2750 7d37b2d4ef970281aef23c716129557b 520 Pfam PF02239 Cytochrome D1 heme domain 136 511 3.1E-95 T 23-10-2018 DLM_2354 59f905bf560ef00a13e979ef304521c0 988 SUPERFAMILY SSF48452 336 478 3.8E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_2354 59f905bf560ef00a13e979ef304521c0 988 SUPERFAMILY SSF48452 460 606 8.22E-9 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_2354 59f905bf560ef00a13e979ef304521c0 988 Gene3D G3DSA:1.25.40.10 457 686 3.9E-11 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_1004 b9f62c756f5f6c51a4c7e9cd49d630a3 236 SUPERFAMILY SSF46785 3 71 1.77E-10 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1004 b9f62c756f5f6c51a4c7e9cd49d630a3 236 SUPERFAMILY SSF55781 57 236 2.49E-35 T 23-10-2018 DLM_1004 b9f62c756f5f6c51a4c7e9cd49d630a3 236 Gene3D G3DSA:3.30.450.40 72 236 1.1E-35 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_1004 b9f62c756f5f6c51a4c7e9cd49d630a3 236 Pfam PF09339 IclR helix-turn-helix domain 4 50 1.4E-6 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DLM_1004 b9f62c756f5f6c51a4c7e9cd49d630a3 236 Gene3D G3DSA:1.10.10.10 1 71 5.0E-12 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1004 b9f62c756f5f6c51a4c7e9cd49d630a3 236 Pfam PF01614 Bacterial transcriptional regulator 118 232 3.9E-22 T 23-10-2018 IPR014757 Transcription regulator IclR, C-terminal DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 327 464 6.5E-17 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 SUPERFAMILY SSF88697 1 177 2.73E-41 T 23-10-2018 IPR015947 PUA-like superfamily DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 652 660 - T 23-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Gene3D G3DSA:1.20.58.1480 97 221 4.1E-43 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Gene3D G3DSA:3.40.50.300 289 465 1.3E-61 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Gene3D G3DSA:1.10.8.60 466 560 6.4E-31 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Hamap MF_01973 Lon protease [lon]. 1 748 69.789 T 23-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 TIGRFAM TIGR00763 lon: endopeptidase La 1 746 7.1E-290 T 23-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 1 176 1.4E-32 T 23-10-2018 IPR003111 Lon, substrate-binding domain DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 SMART SM00464 1 178 1.1E-55 T 23-10-2018 IPR003111 Lon, substrate-binding domain DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Gene3D G3DSA:3.30.230.10 561 748 1.5E-82 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 PIRSF PIRSF001174 1 751 0.0 T 23-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Gene3D G3DSA:2.30.130.40 1 91 4.4E-24 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 SUPERFAMILY SSF54211 571 746 2.16E-59 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 720 1.1E-54 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 331 350 1.1E-54 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 571 587 1.1E-54 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 649 668 1.1E-54 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 679 698 1.1E-54 T 23-10-2018 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 SMART SM00382 323 467 9.1E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 546 748 1.6E-96 T 23-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DLM_1093 e1e3db25903730c5e79baf295fde17f1 778 SUPERFAMILY SSF52540 289 562 8.42E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3774 497bf96aa0a3d0f36757aeda7d421ebb 479 Pfam PF01435 Peptidase family M48 63 252 2.3E-37 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DLM_3774 497bf96aa0a3d0f36757aeda7d421ebb 479 SUPERFAMILY SSF48452 282 453 2.28E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3774 497bf96aa0a3d0f36757aeda7d421ebb 479 Gene3D G3DSA:1.25.40.10 241 471 1.6E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3774 497bf96aa0a3d0f36757aeda7d421ebb 479 Gene3D G3DSA:3.30.2010.10 58 143 2.4E-6 T 23-10-2018 DLM_2166 167593c83737de7e34980b1dd81e19f9 542 SMART SM00283 280 541 7.5E-63 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2166 167593c83737de7e34980b1dd81e19f9 542 SMART SM00304 300 367 89.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2166 167593c83737de7e34980b1dd81e19f9 542 SMART SM00304 212 265 1.2E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2166 167593c83737de7e34980b1dd81e19f9 542 SUPERFAMILY SSF58104 233 542 7.98E-71 T 23-10-2018 DLM_2166 167593c83737de7e34980b1dd81e19f9 542 Gene3D G3DSA:1.10.287.950 211 542 7.6E-71 T 23-10-2018 DLM_2166 167593c83737de7e34980b1dd81e19f9 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 508 1.5E-41 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2166 167593c83737de7e34980b1dd81e19f9 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 183 4.5E-22 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 SMART SM00388 247 314 2.6E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 307 9.2E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 Gene3D G3DSA:1.10.287.130 194 310 2.4E-14 T 23-10-2018 DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 SMART SM00387 359 466 3.6E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 1.1E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 1.1E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 1.1E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 SUPERFAMILY SSF55874 318 466 7.6E-29 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 SUPERFAMILY SSF47384 230 308 5.49E-13 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 464 3.9E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0594 e486bd4343c58e7d2d2aa00670be514a 466 Gene3D G3DSA:3.30.565.10 320 466 9.0E-28 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0126 6d6f7092fcd2ff9cb782d8d5719a4af2 432 Pfam PF00860 Permease family 20 392 7.3E-54 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DLM_0126 6d6f7092fcd2ff9cb782d8d5719a4af2 432 PIRSF PIRSF005353 1 432 2.9E-178 T 23-10-2018 IPR026033 Purine permease PbuG-like DLM_1695 43478509654b830102b841b27b158f28 306 Gene3D G3DSA:3.40.190.10 90 292 2.9E-61 T 23-10-2018 DLM_1695 43478509654b830102b841b27b158f28 306 SUPERFAMILY SSF53850 90 294 2.71E-41 T 23-10-2018 DLM_1695 43478509654b830102b841b27b158f28 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.2E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1695 43478509654b830102b841b27b158f28 306 SUPERFAMILY SSF46785 5 86 2.92E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1695 43478509654b830102b841b27b158f28 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.9E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1695 43478509654b830102b841b27b158f28 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.9E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1695 43478509654b830102b841b27b158f28 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.9E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1695 43478509654b830102b841b27b158f28 306 Gene3D G3DSA:3.40.190.10 171 268 2.9E-61 T 23-10-2018 DLM_1695 43478509654b830102b841b27b158f28 306 Gene3D G3DSA:1.10.10.10 1 87 9.2E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1695 43478509654b830102b841b27b158f28 306 Pfam PF03466 LysR substrate binding domain 98 295 4.3E-29 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_4149 0b5cfc73d2190bd070a72350553e0afa 283 SUPERFAMILY SSF53697 91 258 3.42E-39 T 23-10-2018 DLM_4149 0b5cfc73d2190bd070a72350553e0afa 283 SUPERFAMILY SSF46689 2 77 5.91E-18 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_4149 0b5cfc73d2190bd070a72350553e0afa 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 72 4.0E-22 T 23-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DLM_4149 0b5cfc73d2190bd070a72350553e0afa 283 Pfam PF01380 SIS domain 123 250 4.3E-20 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_4149 0b5cfc73d2190bd070a72350553e0afa 283 Gene3D G3DSA:1.10.10.10 1 76 2.2E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4149 0b5cfc73d2190bd070a72350553e0afa 283 ProSitePatterns PS00356 LacI-type HTH domain signature. 35 53 - T 23-10-2018 DLM_4149 0b5cfc73d2190bd070a72350553e0afa 283 Gene3D G3DSA:3.40.50.10490 89 275 2.7E-43 T 23-10-2018 DLM_1678 0eac80ba3a4a059446ebb0dbf5320a5a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 7.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1678 0eac80ba3a4a059446ebb0dbf5320a5a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 7.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1678 0eac80ba3a4a059446ebb0dbf5320a5a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 7.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1678 0eac80ba3a4a059446ebb0dbf5320a5a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 7.1E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1678 0eac80ba3a4a059446ebb0dbf5320a5a 260 Gene3D G3DSA:3.40.50.720 8 252 2.0E-53 T 23-10-2018 DLM_1678 0eac80ba3a4a059446ebb0dbf5320a5a 260 Pfam PF00106 short chain dehydrogenase 17 201 4.4E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1678 0eac80ba3a4a059446ebb0dbf5320a5a 260 SUPERFAMILY SSF51735 11 255 4.42E-55 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2330 77f933fdc27718e27eeb30016a4d0b7d 250 Gene3D G3DSA:3.40.1350.110 101 250 3.7E-56 T 23-10-2018 DLM_1974 50ae42b2e5fd30ed78978aa2fb08a961 239 Pfam PF00696 Amino acid kinase family 8 215 1.1E-28 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DLM_1974 50ae42b2e5fd30ed78978aa2fb08a961 239 Gene3D G3DSA:3.40.1160.10 1 239 1.6E-76 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_1974 50ae42b2e5fd30ed78978aa2fb08a961 239 SUPERFAMILY SSF53633 5 238 1.7E-70 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DLM_1974 50ae42b2e5fd30ed78978aa2fb08a961 239 PIRSF PIRSF005650 2 239 4.8E-92 T 23-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DLM_1974 50ae42b2e5fd30ed78978aa2fb08a961 239 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 238 44.671 T 23-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DLM_1974 50ae42b2e5fd30ed78978aa2fb08a961 239 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 7 238 4.0E-103 T 23-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 332 338 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 SUPERFAMILY SSF56784 318 584 3.57E-37 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 SUPERFAMILY SSF81665 47 324 2.09E-12 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 Pfam PF00122 E1-E2 ATPase 133 308 1.6E-33 T 23-10-2018 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 Gene3D G3DSA:3.40.1110.10 341 471 9.7E-54 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 Gene3D G3DSA:3.40.50.1000 472 592 3.7E-25 T 23-10-2018 IPR023214 HAD superfamily DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 4.3E-24 T 23-10-2018 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 173 187 4.3E-24 T 23-10-2018 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 488 498 4.3E-24 T 23-10-2018 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 560 4.3E-24 T 23-10-2018 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 576 4.3E-24 T 23-10-2018 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 Gene3D G3DSA:2.70.150.20 127 231 3.0E-26 T 23-10-2018 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 555 1.3E-33 T 23-10-2018 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 27 701 0.0 T 23-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 SUPERFAMILY SSF81653 133 226 1.28E-21 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 91 362 1.4E-32 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 394 629 9.6E-47 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1032 5570fff865d09cda414c2ac08faac4dd 707 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 27 705 41.352 T 23-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 DLM_3943 8bb82c746a0cacb223ca786ae50b88ca 1158 Gene3D G3DSA:3.40.920.10 722 930 2.1E-22 T 23-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DLM_3943 8bb82c746a0cacb223ca786ae50b88ca 1158 SUPERFAMILY SSF52518 19 208 3.06E-20 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3943 8bb82c746a0cacb223ca786ae50b88ca 1158 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 733 920 5.7E-26 T 23-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DLM_3943 8bb82c746a0cacb223ca786ae50b88ca 1158 SUPERFAMILY SSF52922 274 402 8.63E-8 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DLM_3943 8bb82c746a0cacb223ca786ae50b88ca 1158 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 459 609 4.8E-6 T 23-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DLM_3943 8bb82c746a0cacb223ca786ae50b88ca 1158 Gene3D G3DSA:3.40.50.970 5 220 1.3E-28 T 23-10-2018 DLM_3943 8bb82c746a0cacb223ca786ae50b88ca 1158 SUPERFAMILY SSF52518 439 626 1.32E-14 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3943 8bb82c746a0cacb223ca786ae50b88ca 1158 SUPERFAMILY SSF53323 724 967 7.19E-33 T 23-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DLM_2754 df4dd91d37ecb2ab7f58adee6ccd65fb 401 Pfam PF02239 Cytochrome D1 heme domain 35 395 1.4E-104 T 23-10-2018 DLM_2754 df4dd91d37ecb2ab7f58adee6ccd65fb 401 SUPERFAMILY SSF51004 12 398 1.05E-71 T 23-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DLM_2754 df4dd91d37ecb2ab7f58adee6ccd65fb 401 Gene3D G3DSA:2.140.10.20 29 399 1.4E-50 T 23-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily DLM_1828 1d4615785af0d8e4b0f0b799d561627c 253 Pfam PF02274 Amidinotransferase 55 250 1.8E-13 T 23-10-2018 DLM_1828 1d4615785af0d8e4b0f0b799d561627c 253 SUPERFAMILY SSF55909 3 252 3.05E-48 T 23-10-2018 DLM_1828 1d4615785af0d8e4b0f0b799d561627c 253 Gene3D G3DSA:3.75.10.10 1 253 4.8E-62 T 23-10-2018 DLM_1394 3b7598192babf2fd792f1b41872e605b 293 SUPERFAMILY SSF52540 25 257 7.59E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1394 3b7598192babf2fd792f1b41872e605b 293 Pfam PF00005 ABC transporter 41 197 9.7E-24 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1394 3b7598192babf2fd792f1b41872e605b 293 SMART SM00382 47 246 5.9E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1394 3b7598192babf2fd792f1b41872e605b 293 Gene3D G3DSA:3.40.50.300 18 287 3.4E-71 T 23-10-2018 DLM_0170 e9128e3255ca7a71d2b4606f3dab736f 343 Gene3D G3DSA:2.40.10.240 62 159 8.2E-115 T 23-10-2018 DLM_0170 e9128e3255ca7a71d2b4606f3dab736f 343 SUPERFAMILY SSF111337 1 336 1.7E-133 T 23-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DLM_0170 e9128e3255ca7a71d2b4606f3dab736f 343 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 336 2.4E-134 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DLM_0170 e9128e3255ca7a71d2b4606f3dab736f 343 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 337 46.25 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DLM_0170 e9128e3255ca7a71d2b4606f3dab736f 343 Gene3D G3DSA:3.40.1780.10 14 336 8.2E-115 T 23-10-2018 DLM_0170 e9128e3255ca7a71d2b4606f3dab736f 343 Pfam PF02547 Queuosine biosynthesis protein 3 336 3.2E-132 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DLM_2845 7212faf2491f810d2244bc0e59edc049 758 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 64 248 5.1E-12 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_2845 7212faf2491f810d2244bc0e59edc049 758 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 261 382 8.0E-16 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 Gene3D G3DSA:1.25.40.10 7 252 3.6E-45 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 Pfam PF13374 Tetratricopeptide repeat 221 246 9.7E-6 T 23-10-2018 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SUPERFAMILY SSF48452 18 246 1.67E-31 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SUPERFAMILY SSF53756 373 610 3.45E-12 T 23-10-2018 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 Gene3D G3DSA:3.40.50.2000 510 601 9.4E-6 T 23-10-2018 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SUPERFAMILY SSF48452 207 343 3.52E-21 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 80 113 0.52 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 114 147 0.023 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 46 79 0.33 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 287 320 14.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 185 218 200.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 12 45 45.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 219 252 0.14 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 253 286 0.29 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 SMART SM00028 151 184 140.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 Gene3D G3DSA:1.25.40.10 253 354 2.3E-14 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 Pfam PF13432 Tetratricopeptide repeat 18 66 0.0023 T 23-10-2018 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 Pfam PF13432 Tetratricopeptide repeat 84 144 8.0E-5 T 23-10-2018 DLM_3442 cfcdaf9cce4d6ca2eb8e13d3610dc287 628 Pfam PF13432 Tetratricopeptide repeat 257 320 1.9E-9 T 23-10-2018 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 Gene3D G3DSA:3.50.50.60 122 247 4.5E-35 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 SUPERFAMILY SSF51905 1 315 9.19E-30 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 2.3E-9 T 23-10-2018 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 2.3E-9 T 23-10-2018 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.3E-9 T 23-10-2018 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 2.3E-9 T 23-10-2018 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 298 3.4E-18 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 6.3E-10 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 111 119 6.3E-10 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 6.3E-10 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DLM_3468 c611c13ac4acabb155829f1d4cee00ed 408 Gene3D G3DSA:3.50.50.60 7 302 4.5E-35 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2742 c00123f938e4a79d6c0cf15052fe991e 255 SMART SM00382 26 215 7.0E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2742 c00123f938e4a79d6c0cf15052fe991e 255 Gene3D G3DSA:3.40.50.300 1 254 1.7E-62 T 23-10-2018 DLM_2742 c00123f938e4a79d6c0cf15052fe991e 255 SUPERFAMILY SSF52540 2 231 5.74E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2742 c00123f938e4a79d6c0cf15052fe991e 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2742 c00123f938e4a79d6c0cf15052fe991e 255 Pfam PF00005 ABC transporter 26 166 5.7E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0915 c2fa632f33210e27a46fc1e4ee605b57 487 SUPERFAMILY SSF53720 21 466 4.06E-108 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0915 c2fa632f33210e27a46fc1e4ee605b57 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_0915 c2fa632f33210e27a46fc1e4ee605b57 487 Gene3D G3DSA:3.40.309.10 228 430 1.8E-141 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0915 c2fa632f33210e27a46fc1e4ee605b57 487 Pfam PF00171 Aldehyde dehydrogenase family 27 450 2.8E-77 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0915 c2fa632f33210e27a46fc1e4ee605b57 487 Gene3D G3DSA:3.40.605.10 27 450 1.8E-141 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0915 c2fa632f33210e27a46fc1e4ee605b57 487 PIRSF PIRSF036492 3 483 6.5E-151 T 23-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 Pfam PF00764 Arginosuccinate synthase 8 400 4.1E-150 T 23-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 401 2.7E-139 T 23-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 SUPERFAMILY SSF52402 5 170 2.43E-46 T 23-10-2018 DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 23-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 Gene3D G3DSA:3.40.50.620 5 176 3.9E-65 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 405 50.575 T 23-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 Gene3D G3DSA:3.90.1260.10 180 407 1.2E-97 T 23-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 23-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_1111 4f77884e2b04bcb042fe3024f6a7b4af 408 SUPERFAMILY SSF69864 179 403 3.92E-93 T 23-10-2018 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 SMART SM00388 134 198 2.2E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 243 348 1.0E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 SUPERFAMILY SSF47384 117 199 1.49E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 SUPERFAMILY SSF158472 79 131 4.18E-5 T 23-10-2018 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 SMART SM00304 79 133 9.1E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 Gene3D G3DSA:3.30.565.10 193 348 2.1E-30 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 292 1.7E-10 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.7E-10 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.7E-10 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 198 1.8E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 SMART SM00387 242 350 6.5E-26 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 Gene3D G3DSA:1.10.287.130 77 192 1.6E-17 T 23-10-2018 DLM_1702 fddbc4494597043bcbdc272ee93a68de 355 SUPERFAMILY SSF55874 188 347 3.41E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3670 3a93fd7dd8d72df04c92ceb62d167727 208 Pfam PF02527 rRNA small subunit methyltransferase G 23 203 3.2E-58 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DLM_3670 3a93fd7dd8d72df04c92ceb62d167727 208 PIRSF PIRSF003078 2 208 3.3E-58 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DLM_3670 3a93fd7dd8d72df04c92ceb62d167727 208 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 204 6.8E-59 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DLM_3670 3a93fd7dd8d72df04c92ceb62d167727 208 SUPERFAMILY SSF53335 7 206 5.42E-42 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3670 3a93fd7dd8d72df04c92ceb62d167727 208 Gene3D G3DSA:3.40.50.150 1 208 2.9E-69 T 23-10-2018 DLM_3670 3a93fd7dd8d72df04c92ceb62d167727 208 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 204 28.428 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DLM_4140 2815ace0e99fba42b63dfa44e6258c73 300 SUPERFAMILY SSF161098 62 286 2.88E-49 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4140 2815ace0e99fba42b63dfa44e6258c73 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 287 3.3E-13 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4140 2815ace0e99fba42b63dfa44e6258c73 300 Gene3D G3DSA:1.10.3720.10 58 299 1.0E-55 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0653 4885e29fcb8434bc7d185229a203b736 263 PIRSF PIRSF000388 1 263 3.4E-104 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DLM_0653 4885e29fcb8434bc7d185229a203b736 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 263 43.047 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DLM_0653 4885e29fcb8434bc7d185229a203b736 263 Gene3D G3DSA:3.20.20.60 1 263 1.4E-110 T 23-10-2018 DLM_0653 4885e29fcb8434bc7d185229a203b736 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 1.8E-102 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DLM_0653 4885e29fcb8434bc7d185229a203b736 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 2 258 2.6E-111 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DLM_0653 4885e29fcb8434bc7d185229a203b736 263 SUPERFAMILY SSF51621 2 263 2.63E-105 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_4218 0ed4265cc39210a52aa845ec5de512b2 261 Pfam PF00899 ThiF family 18 258 3.2E-36 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DLM_4218 0ed4265cc39210a52aa845ec5de512b2 261 Gene3D G3DSA:3.40.50.720 2 260 1.8E-91 T 23-10-2018 DLM_4218 0ed4265cc39210a52aa845ec5de512b2 261 SUPERFAMILY SSF69572 9 258 1.7E-57 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DLM_2671 9dac632bf03278cfdc2ccd61a14b55c8 427 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 7 140 8.0E-48 T 23-10-2018 IPR009826 DNA circulation, N-terminal DLM_2671 9dac632bf03278cfdc2ccd61a14b55c8 427 Pfam PF07157 DNA circularisation protein N-terminus 7 92 2.2E-29 T 23-10-2018 IPR009826 DNA circulation, N-terminal DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SUPERFAMILY SSF49313 690 779 1.18E-14 T 23-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SUPERFAMILY SSF49313 592 684 6.59E-21 T 23-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SUPERFAMILY SSF54001 241 467 2.73E-29 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SUPERFAMILY SSF49313 882 974 3.92E-21 T 23-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Gene3D G3DSA:2.60.40.10 879 982 8.3E-19 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Gene3D G3DSA:2.60.40.10 589 688 1.1E-16 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Gene3D G3DSA:2.60.40.10 780 878 2.7E-16 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SMART SM00736 989 1082 5.8E-12 T 23-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SMART SM00736 884 983 1.4E-29 T 23-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SMART SM00736 594 690 2.2E-28 T 23-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SMART SM00736 691 786 1.0E-14 T 23-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SMART SM00736 787 883 1.5E-25 T 23-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SMART SM00736 498 593 1.3E-19 T 23-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Gene3D G3DSA:2.60.40.10 689 779 6.2E-14 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Gene3D G3DSA:2.60.40.10 494 588 5.9E-14 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Gene3D G3DSA:2.60.40.10 983 1075 8.4E-10 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Pfam PF00648 Calpain family cysteine protease 241 465 1.6E-17 T 23-10-2018 IPR001300 Peptidase C2, calpain, catalytic domain GO:0004198|GO:0005622|GO:0006508 Reactome: R-HSA-1474228 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Pfam PF05345 Putative Ig domain 724 770 7.5E-5 T 23-10-2018 IPR008009 Putative Ig DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Pfam PF05345 Putative Ig domain 628 673 1.1E-5 T 23-10-2018 IPR008009 Putative Ig DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Pfam PF05345 Putative Ig domain 918 962 5.2E-8 T 23-10-2018 IPR008009 Putative Ig DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 Pfam PF05345 Putative Ig domain 821 866 5.7E-6 T 23-10-2018 IPR008009 Putative Ig DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SUPERFAMILY SSF49313 496 587 1.69E-14 T 23-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SUPERFAMILY SSF49313 785 877 6.12E-19 T 23-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SUPERFAMILY SSF49313 995 1076 5.02E-12 T 23-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 DLM_0744 a5f438d90bc790a254fe1473df5ff388 1109 SMART SM00230 164 495 0.0038 T 23-10-2018 IPR001300 Peptidase C2, calpain, catalytic domain GO:0004198|GO:0005622|GO:0006508 Reactome: R-HSA-1474228 DLM_3401 76afb7f74078f478e23d7abbc6a532e3 734 Gene3D G3DSA:3.40.50.300 454 633 1.6E-25 T 23-10-2018 DLM_3401 76afb7f74078f478e23d7abbc6a532e3 734 SUPERFAMILY SSF52540 439 631 2.89E-21 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3401 76afb7f74078f478e23d7abbc6a532e3 734 Pfam PF07728 AAA domain (dynein-related subfamily) 469 626 3.2E-29 T 23-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 DLM_3401 76afb7f74078f478e23d7abbc6a532e3 734 SMART SM00382 466 632 3.4E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1156 daa105c18c0d86cfacae1c8e28261cd6 462 Pfam PF00209 Sodium:neurotransmitter symporter family 164 459 9.1E-31 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DLM_1156 daa105c18c0d86cfacae1c8e28261cd6 462 Pfam PF00209 Sodium:neurotransmitter symporter family 17 132 1.4E-20 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DLM_1156 daa105c18c0d86cfacae1c8e28261cd6 462 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 54 73 4.4E-13 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DLM_1156 daa105c18c0d86cfacae1c8e28261cd6 462 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 4.4E-13 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DLM_1156 daa105c18c0d86cfacae1c8e28261cd6 462 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 397 417 4.4E-13 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DLM_1156 daa105c18c0d86cfacae1c8e28261cd6 462 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 25 46 4.4E-13 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DLM_1156 daa105c18c0d86cfacae1c8e28261cd6 462 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 41 55 - T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DLM_1156 daa105c18c0d86cfacae1c8e28261cd6 462 SUPERFAMILY SSF161070 17 459 1.24E-123 T 23-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DLM_1533 1ba2d030a8cfaea51598a1371dee80ec 321 SUPERFAMILY SSF53822 33 315 3.44E-56 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1533 1ba2d030a8cfaea51598a1371dee80ec 321 Gene3D G3DSA:3.40.50.2300 58 303 2.1E-77 T 23-10-2018 DLM_1533 1ba2d030a8cfaea51598a1371dee80ec 321 Gene3D G3DSA:3.40.50.2300 135 277 2.1E-77 T 23-10-2018 DLM_1533 1ba2d030a8cfaea51598a1371dee80ec 321 Pfam PF13407 Periplasmic binding protein domain 37 295 3.8E-44 T 23-10-2018 IPR025997 Periplasmic binding protein DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 SMART SM00382 165 307 1.2E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 417 437 1.2E-6 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 400 417 1.2E-6 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 SUPERFAMILY SSF52172 1 190 2.99E-39 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 Gene3D G3DSA:1.10.10.60 383 439 1.1E-13 T 23-10-2018 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 Pfam PF02954 Bacterial regulatory protein, Fis family 394 434 1.3E-7 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 SMART SM00448 4 115 4.4E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 SUPERFAMILY SSF52540 145 373 9.94E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 Gene3D G3DSA:3.40.50.2300 2 136 1.3E-32 T 23-10-2018 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 Gene3D G3DSA:3.40.50.300 137 314 3.3E-58 T 23-10-2018 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 Pfam PF00158 Sigma-54 interaction domain 145 310 1.7E-62 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 Gene3D G3DSA:1.10.8.60 315 377 8.9E-19 T 23-10-2018 DLM_1932 961ee26f9f87e7dd49393d476db1a005 439 SUPERFAMILY SSF46689 385 437 1.61E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3892 55f767fecdde99bddfd260696b3ffe5e 372 SUPERFAMILY SSF49401 231 372 4.72E-22 T 23-10-2018 IPR008966 Adhesion domain superfamily DLM_3892 55f767fecdde99bddfd260696b3ffe5e 372 Pfam PF00419 Fimbrial protein 227 372 3.7E-12 T 23-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 DLM_3892 55f767fecdde99bddfd260696b3ffe5e 372 Gene3D G3DSA:2.60.40.1090 230 372 3.4E-26 T 23-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 DLM_1073 11a238da3c3d9d9d9411b377bf01b753 164 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 3 164 22.375 T 23-10-2018 IPR022920 Disulphide bond formation protein DsbB DLM_1073 11a238da3c3d9d9d9411b377bf01b753 164 SUPERFAMILY SSF158442 11 159 6.15E-41 T 23-10-2018 IPR023380 DsbB-like superfamily DLM_1073 11a238da3c3d9d9d9411b377bf01b753 164 Gene3D G3DSA:1.20.1550.10 3 164 7.1E-49 T 23-10-2018 IPR023380 DsbB-like superfamily DLM_1073 11a238da3c3d9d9d9411b377bf01b753 164 Pfam PF02600 Disulfide bond formation protein DsbB 8 158 1.6E-40 T 23-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DLM_3326 e612ca68eb26d0a2fe796ceb50ecf701 418 SUPERFAMILY SSF54373 275 365 6.8E-16 T 23-10-2018 DLM_3326 e612ca68eb26d0a2fe796ceb50ecf701 418 Gene3D G3DSA:3.50.50.60 1 74 1.6E-12 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3326 e612ca68eb26d0a2fe796ceb50ecf701 418 Gene3D G3DSA:3.30.9.10 134 367 1.0E-54 T 23-10-2018 DLM_3326 e612ca68eb26d0a2fe796ceb50ecf701 418 Pfam PF01266 FAD dependent oxidoreductase 2 403 1.1E-67 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_3326 e612ca68eb26d0a2fe796ceb50ecf701 418 SUPERFAMILY SSF51905 1 414 8.16E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3326 e612ca68eb26d0a2fe796ceb50ecf701 418 Gene3D G3DSA:3.50.50.60 100 410 1.0E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 SUPERFAMILY SSF103190 36 213 7.22E-31 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 Pfam PF00672 HAMP domain 344 391 3.2E-8 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 Gene3D G3DSA:3.30.450.20 80 213 2.5E-21 T 23-10-2018 DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 SUPERFAMILY SSF158472 344 393 7.06E-8 T 23-10-2018 DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 SMART SM00304 344 396 1.3E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 SMART SM00267 398 570 2.2E-58 T 23-10-2018 IPR000160 GGDEF domain DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 Gene3D G3DSA:1.20.1480.50 311 402 2.6E-12 T 23-10-2018 DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 Gene3D G3DSA:3.30.70.270 403 570 4.6E-56 T 23-10-2018 DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 Pfam PF00990 Diguanylate cyclase, GGDEF domain 409 564 1.3E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 SUPERFAMILY SSF55073 414 566 1.18E-48 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2935 c7b1acbd9566b7f592a27888b1cb5c4f 574 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 407 565 2.0E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_3591 c9690f04254b6fb0f6cbfaeaaf2e35ba 230 Pfam PF01263 Aldose 1-epimerase 4 223 8.1E-28 T 23-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DLM_3591 c9690f04254b6fb0f6cbfaeaaf2e35ba 230 Gene3D G3DSA:2.70.98.10 2 225 1.1E-53 T 23-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DLM_3591 c9690f04254b6fb0f6cbfaeaaf2e35ba 230 SUPERFAMILY SSF74650 3 225 4.08E-31 T 23-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DLM_1813 326b705c1064dc127fad8677f33a4a6c 339 Gene3D G3DSA:3.30.70.1140 1 75 9.1E-30 T 23-10-2018 DLM_1813 326b705c1064dc127fad8677f33a4a6c 339 Gene3D G3DSA:3.20.20.70 76 333 1.3E-91 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1813 326b705c1064dc127fad8677f33a4a6c 339 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 328 9.2E-105 T 23-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DLM_1813 326b705c1064dc127fad8677f33a4a6c 339 Pfam PF00793 DAHP synthetase I family 93 326 8.2E-61 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DLM_1813 326b705c1064dc127fad8677f33a4a6c 339 SUPERFAMILY SSF51569 1 336 1.37E-104 T 23-10-2018 DLM_3772 166d6bc6879062898b242c9771641af1 556 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 331 555 3.0E-81 T 23-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DLM_3772 166d6bc6879062898b242c9771641af1 556 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DLM_3772 166d6bc6879062898b242c9771641af1 556 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 105 556 5.9E-185 T 23-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 DLM_3772 166d6bc6879062898b242c9771641af1 556 Pfam PF02817 e3 binding domain 255 288 2.8E-13 T 23-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DLM_3772 166d6bc6879062898b242c9771641af1 556 Pfam PF00364 Biotin-requiring enzyme 6 77 1.4E-18 T 23-10-2018 IPR000089 Biotin/lipoyl attachment DLM_3772 166d6bc6879062898b242c9771641af1 556 Pfam PF00364 Biotin-requiring enzyme 126 196 1.1E-16 T 23-10-2018 IPR000089 Biotin/lipoyl attachment DLM_3772 166d6bc6879062898b242c9771641af1 556 SUPERFAMILY SSF51230 3 97 2.62E-22 T 23-10-2018 IPR011053 Single hybrid motif DLM_3772 166d6bc6879062898b242c9771641af1 556 SUPERFAMILY SSF52777 318 556 1.38E-84 T 23-10-2018 DLM_3772 166d6bc6879062898b242c9771641af1 556 SUPERFAMILY SSF47005 252 293 1.16E-11 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DLM_3772 166d6bc6879062898b242c9771641af1 556 Gene3D G3DSA:4.10.320.10 254 298 3.0E-18 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DLM_3772 166d6bc6879062898b242c9771641af1 556 SUPERFAMILY SSF51230 125 213 3.01E-20 T 23-10-2018 IPR011053 Single hybrid motif DLM_3772 166d6bc6879062898b242c9771641af1 556 Gene3D G3DSA:2.40.50.100 3 81 1.3E-19 T 23-10-2018 DLM_3772 166d6bc6879062898b242c9771641af1 556 Gene3D G3DSA:2.40.50.100 124 200 7.9E-18 T 23-10-2018 DLM_3772 166d6bc6879062898b242c9771641af1 556 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 148 177 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DLM_3772 166d6bc6879062898b242c9771641af1 556 Gene3D G3DSA:3.30.559.10 314 556 4.1E-94 T 23-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DLM_2904 8a080d02579ec37c427779558cfcb638 237 SUPERFAMILY SSF52317 4 192 1.06E-37 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2904 8a080d02579ec37c427779558cfcb638 237 Pfam PF00117 Glutamine amidotransferase class-I 45 181 1.4E-11 T 23-10-2018 IPR017926 Glutamine amidotransferase DLM_2904 8a080d02579ec37c427779558cfcb638 237 Gene3D G3DSA:3.40.50.880 1 236 6.1E-62 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1765 7a5e19f842ba03285495f569c5f7d688 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 471 2.7E-131 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_1765 7a5e19f842ba03285495f569c5f7d688 482 Gene3D G3DSA:2.20.200.10 107 360 7.2E-142 T 23-10-2018 DLM_1765 7a5e19f842ba03285495f569c5f7d688 482 Pfam PF02321 Outer membrane efflux protein 70 260 1.3E-28 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1765 7a5e19f842ba03285495f569c5f7d688 482 Pfam PF02321 Outer membrane efflux protein 287 469 7.4E-31 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1765 7a5e19f842ba03285495f569c5f7d688 482 SUPERFAMILY SSF56954 3 474 9.55E-116 T 23-10-2018 DLM_1765 7a5e19f842ba03285495f569c5f7d688 482 Gene3D G3DSA:1.20.1600.10 61 471 7.2E-142 T 23-10-2018 DLM_3609 7242826236ca8c8316f67fda8e66b936 343 Pfam PF03601 Conserved hypothetical protein 698 9 318 6.0E-103 T 23-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 DLM_3609 7242826236ca8c8316f67fda8e66b936 343 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 8 339 9.1E-114 T 23-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 DLM_1913 e3ea239dde4a7b6e3d2553889c1b1ffc 388 PRINTS PR00682 Isopenicillin N synthase signature 235 256 1.7E-7 T 23-10-2018 DLM_1913 e3ea239dde4a7b6e3d2553889c1b1ffc 388 PRINTS PR00682 Isopenicillin N synthase signature 64 81 1.7E-7 T 23-10-2018 DLM_1913 e3ea239dde4a7b6e3d2553889c1b1ffc 388 PRINTS PR00682 Isopenicillin N synthase signature 271 297 1.7E-7 T 23-10-2018 DLM_1913 e3ea239dde4a7b6e3d2553889c1b1ffc 388 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 217 312 1.4E-19 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DLM_1913 e3ea239dde4a7b6e3d2553889c1b1ffc 388 SUPERFAMILY SSF51197 35 321 3.71E-81 T 23-10-2018 DLM_1913 e3ea239dde4a7b6e3d2553889c1b1ffc 388 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 42 165 2.7E-37 T 23-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain DLM_1913 e3ea239dde4a7b6e3d2553889c1b1ffc 388 Gene3D G3DSA:2.60.120.330 33 357 9.1E-82 T 23-10-2018 IPR027443 Isopenicillin N synthase-like DLM_1228 b9660584faba413ba86b89aee6589f87 221 Pfam PF01965 DJ-1/PfpI family 21 214 6.9E-14 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DLM_1228 b9660584faba413ba86b89aee6589f87 221 Gene3D G3DSA:3.40.50.880 1 220 5.8E-77 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1228 b9660584faba413ba86b89aee6589f87 221 SUPERFAMILY SSF52317 1 220 2.57E-71 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2498 3b631fdfc92b99f7ef2c39142174981f 399 SUPERFAMILY SSF141868 147 390 1.15E-68 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2498 3b631fdfc92b99f7ef2c39142174981f 399 SMART SM00448 7 125 6.9E-11 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2498 3b631fdfc92b99f7ef2c39142174981f 399 Pfam PF00072 Response regulator receiver domain 9 123 1.5E-15 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2498 3b631fdfc92b99f7ef2c39142174981f 399 Gene3D G3DSA:3.20.20.450 146 390 3.3E-71 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2498 3b631fdfc92b99f7ef2c39142174981f 399 Pfam PF00563 EAL domain 150 379 2.8E-57 T 23-10-2018 IPR001633 EAL domain DLM_2498 3b631fdfc92b99f7ef2c39142174981f 399 SUPERFAMILY SSF52172 6 135 2.13E-22 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2498 3b631fdfc92b99f7ef2c39142174981f 399 SMART SM00052 139 384 1.3E-62 T 23-10-2018 IPR001633 EAL domain DLM_2498 3b631fdfc92b99f7ef2c39142174981f 399 Gene3D G3DSA:3.40.50.2300 7 135 1.5E-22 T 23-10-2018 DLM_2516 9340b67c59a59ceb495c6ee970f31f77 335 Gene3D G3DSA:3.30.70.270 142 311 2.7E-46 T 23-10-2018 DLM_2516 9340b67c59a59ceb495c6ee970f31f77 335 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 309 1.3E-35 T 23-10-2018 IPR000160 GGDEF domain DLM_2516 9340b67c59a59ceb495c6ee970f31f77 335 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 311 1.3E-34 T 23-10-2018 IPR000160 GGDEF domain DLM_2516 9340b67c59a59ceb495c6ee970f31f77 335 SMART SM00267 144 313 6.8E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_2516 9340b67c59a59ceb495c6ee970f31f77 335 SUPERFAMILY SSF55073 160 313 1.65E-39 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SMART SM00073 770 868 3.8E-4 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SUPERFAMILY SSF47384 221 304 2.94E-22 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SUPERFAMILY SSF55874 291 466 4.71E-46 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Gene3D G3DSA:1.20.120.160 761 870 1.2E-19 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 302 4.8E-21 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SUPERFAMILY SSF52172 480 597 6.97E-34 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SMART SM00388 237 302 1.4E-26 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SMART SM00387 349 465 5.8E-40 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Pfam PF00072 Response regulator receiver domain 483 592 2.2E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Pfam PF00072 Response regulator receiver domain 622 736 9.0E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Gene3D G3DSA:3.30.565.10 301 471 1.4E-52 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Gene3D G3DSA:3.40.50.12740 481 614 9.5E-35 T 23-10-2018 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SUPERFAMILY SSF47226 719 860 6.67E-22 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Gene3D G3DSA:1.10.287.130 203 300 3.2E-29 T 23-10-2018 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Gene3D G3DSA:3.40.50.2300 615 758 3.5E-44 T 23-10-2018 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SMART SM00448 481 592 8.1E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SMART SM00448 620 736 1.5E-37 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 SUPERFAMILY SSF52172 619 748 7.12E-41 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Pfam PF01627 Hpt domain 781 863 3.0E-9 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 464 2.4E-31 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 1.9E-15 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 1.9E-15 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.9E-15 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2210 5bdbde9db01b30a4c625a1307d453119 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 1.9E-15 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2834 b635b9a7c015907156990d48e0b0c5d3 211 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 16 160 1.9E-36 T 23-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN DLM_2834 b635b9a7c015907156990d48e0b0c5d3 211 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 155 1.1E-29 T 23-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN DLM_2834 b635b9a7c015907156990d48e0b0c5d3 211 Gene3D G3DSA:2.60.40.4150 41 172 2.4E-40 T 23-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 23-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 SUPERFAMILY SSF52833 3 157 1.41E-52 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 23-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 PRINTS PR01011 Glutathione peroxidase family signature 121 130 1.2E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.2E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.2E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 Gene3D G3DSA:3.40.30.10 1 163 3.2E-59 T 23-10-2018 DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 PIRSF PIRSF000303 1 161 6.3E-56 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DLM_0111 05d79c806e27398db4a6aacdb59dc860 164 Pfam PF00255 Glutathione peroxidase 4 110 1.1E-34 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DLM_0723 a113fc02737ddf558b1815e39cf6baab 243 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 4.5E-20 T 23-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 DLM_0723 a113fc02737ddf558b1815e39cf6baab 243 PIRSF PIRSF037208 4 243 1.4E-88 T 23-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 DLM_0723 a113fc02737ddf558b1815e39cf6baab 243 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 10 237 39.671 T 23-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 DLM_0723 a113fc02737ddf558b1815e39cf6baab 243 SUPERFAMILY SSF55729 85 239 4.59E-18 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_0723 a113fc02737ddf558b1815e39cf6baab 243 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 111 231 7.1E-38 T 23-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 DLM_0705 4524776312a83be58c7d47969c19ecbc 405 SMART SM00922 162 268 5.8E-14 T 23-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DLM_0705 4524776312a83be58c7d47969c19ecbc 405 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 67 156 1.4E-10 T 23-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DLM_0705 4524776312a83be58c7d47969c19ecbc 405 Gene3D G3DSA:3.20.20.120 156 393 2.7E-204 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_0705 4524776312a83be58c7d47969c19ecbc 405 SUPERFAMILY SSF54826 54 161 1.62E-27 T 23-10-2018 DLM_0705 4524776312a83be58c7d47969c19ecbc 405 Pfam PF13378 Enolase C-terminal domain-like 179 392 5.0E-46 T 23-10-2018 IPR029065 Enolase C-terminal domain-like DLM_0705 4524776312a83be58c7d47969c19ecbc 405 Hamap MF_01288 L-rhamnonate dehydratase [rhmD]. 8 401 76.244 T 23-10-2018 IPR023444 L-rhamnonate dehydratase GO:0050032 KEGG: 00051+4.2.1.90|MetaCyc: PWY-6713|MetaCyc: PWY-6714 DLM_0705 4524776312a83be58c7d47969c19ecbc 405 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 131 156 - T 23-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DLM_0705 4524776312a83be58c7d47969c19ecbc 405 SUPERFAMILY SSF51604 144 396 1.06E-63 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_0705 4524776312a83be58c7d47969c19ecbc 405 Gene3D G3DSA:3.30.390.10 10 155 2.7E-204 T 23-10-2018 IPR029017 Enolase-like, N-terminal DLM_0999 b08dd69978a9f4673aa54f63ad4e0568 427 PRINTS PR00762 Chloride channel signature 102 121 4.2E-7 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_0999 b08dd69978a9f4673aa54f63ad4e0568 427 PRINTS PR00762 Chloride channel signature 377 393 4.2E-7 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_0999 b08dd69978a9f4673aa54f63ad4e0568 427 PRINTS PR00762 Chloride channel signature 153 172 4.2E-7 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_0999 b08dd69978a9f4673aa54f63ad4e0568 427 SUPERFAMILY SSF81340 8 406 6.93E-86 T 23-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DLM_0999 b08dd69978a9f4673aa54f63ad4e0568 427 Pfam PF00654 Voltage gated chloride channel 61 392 4.1E-64 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_0999 b08dd69978a9f4673aa54f63ad4e0568 427 Gene3D G3DSA:1.10.3080.10 7 407 7.0E-56 T 23-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DLM_0652 0810e96ca2994649740fba63d867f0ea 213 Pfam PF01712 Deoxynucleoside kinase 9 199 2.1E-31 T 23-10-2018 IPR031314 Deoxynucleoside kinase domain DLM_0652 0810e96ca2994649740fba63d867f0ea 213 SUPERFAMILY SSF52540 5 208 2.67E-37 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0652 0810e96ca2994649740fba63d867f0ea 213 PIRSF PIRSF000705 1 208 2.7E-54 T 23-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 DLM_0652 0810e96ca2994649740fba63d867f0ea 213 Gene3D G3DSA:3.40.50.300 8 202 1.8E-37 T 23-10-2018 DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 95 107 - T 23-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 14 368 6.0E-33 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 SUPERFAMILY SSF53335 11 374 5.15E-63 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 Pfam PF00145 C-5 cytosine-specific DNA methylase 12 373 1.6E-45 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 Gene3D G3DSA:3.40.50.150 3 242 1.7E-39 T 23-10-2018 DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 Gene3D G3DSA:3.90.120.10 269 368 4.1E-23 T 23-10-2018 DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 13 29 2.5E-14 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 135 149 2.5E-14 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DLM_4092 9974019c850656b4f87bd6048c3ceeab 423 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 181 194 2.5E-14 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DLM_1540 198ee24d21a60e93c802d4266979b452 242 Gene3D G3DSA:1.10.10.10 9 75 4.4E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1540 198ee24d21a60e93c802d4266979b452 242 Gene3D G3DSA:3.40.1410.10 76 242 1.0E-44 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_1540 198ee24d21a60e93c802d4266979b452 242 Pfam PF07702 UTRA domain 95 234 2.5E-37 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_1540 198ee24d21a60e93c802d4266979b452 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 1.0E-20 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1540 198ee24d21a60e93c802d4266979b452 242 SMART SM00345 14 73 2.1E-17 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1540 198ee24d21a60e93c802d4266979b452 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 6.6E-11 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1540 198ee24d21a60e93c802d4266979b452 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 6.6E-11 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1540 198ee24d21a60e93c802d4266979b452 242 SUPERFAMILY SSF46785 1 84 1.11E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1540 198ee24d21a60e93c802d4266979b452 242 SMART SM00866 94 234 4.9E-32 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_1540 198ee24d21a60e93c802d4266979b452 242 SUPERFAMILY SSF64288 61 241 1.3E-46 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 Pfam PF00367 phosphotransferase system, EIIB 410 442 7.6E-11 T 23-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 Pfam PF00367 phosphotransferase system, EIIB 523 553 2.3E-7 T 23-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 466 2.4E-21 T 23-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 SUPERFAMILY SSF55604 521 592 1.11E-9 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 480 7.3E-202 T 23-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 Pfam PF02378 Phosphotransferase system, EIIC 13 321 3.5E-82 T 23-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 420 437 - T 23-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 Gene3D G3DSA:3.30.1360.60 402 483 1.5E-27 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 Gene3D G3DSA:3.30.1360.60 516 593 1.6E-12 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_3348 f0d94362ac07bcc4faaab5d066523527 593 SUPERFAMILY SSF55604 407 477 2.88E-18 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_4106 d9ec0fcce2712875ea3e59b576a890cb 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.928 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DLM_4106 d9ec0fcce2712875ea3e59b576a890cb 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 69 3.8E-25 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DLM_4106 d9ec0fcce2712875ea3e59b576a890cb 69 SMART SM01234 1 68 9.6E-45 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DLM_4106 d9ec0fcce2712875ea3e59b576a890cb 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 3.0E-19 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DLM_4106 d9ec0fcce2712875ea3e59b576a890cb 69 Pfam PF01809 Haemolytic domain 3 68 9.6E-31 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DLM_0846 77371b4bc7ea3d936fc49a8b79aafc57 334 SUPERFAMILY SSF53850 35 262 1.36E-5 T 23-10-2018 DLM_0846 77371b4bc7ea3d936fc49a8b79aafc57 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 284 5.7E-99 T 23-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DLM_0846 77371b4bc7ea3d936fc49a8b79aafc57 334 Gene3D G3DSA:3.40.190.170 24 326 1.2E-109 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DLM_0846 77371b4bc7ea3d936fc49a8b79aafc57 334 PIRSF PIRSF006470 1 330 3.8E-138 T 23-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DLM_0846 77371b4bc7ea3d936fc49a8b79aafc57 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 313 4.5E-106 T 23-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DLM_3320 948ecfc815c9e267a3eafc0392dd64b9 319 PRINTS PR01270 Histone deacetylase superfamily signature 246 256 2.8E-17 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_3320 948ecfc815c9e267a3eafc0392dd64b9 319 PRINTS PR01270 Histone deacetylase superfamily signature 168 183 2.8E-17 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_3320 948ecfc815c9e267a3eafc0392dd64b9 319 PRINTS PR01270 Histone deacetylase superfamily signature 134 157 2.8E-17 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_3320 948ecfc815c9e267a3eafc0392dd64b9 319 Pfam PF00850 Histone deacetylase domain 32 316 1.1E-85 T 23-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_3320 948ecfc815c9e267a3eafc0392dd64b9 319 SUPERFAMILY SSF52768 15 318 5.28E-107 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily DLM_3320 948ecfc815c9e267a3eafc0392dd64b9 319 Gene3D G3DSA:3.40.800.20 7 318 2.8E-124 T 23-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_2279 d1b688dbd4c9677357a658ecaae91c96 1295 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 19 1280 5.2E-292 T 23-10-2018 IPR011836 Conserved hypothetical protein CHP02099 DLM_2279 d1b688dbd4c9677357a658ecaae91c96 1295 Pfam PF13116 Protein of unknown function 530 803 4.7E-65 T 23-10-2018 IPR025263 Domain of unknown function DUF3971 DLM_2279 d1b688dbd4c9677357a658ecaae91c96 1295 Pfam PF13502 AsmA-like C-terminal region 1035 1277 3.8E-57 T 23-10-2018 IPR032712 AsmA-like, C-terminal DLM_2279 d1b688dbd4c9677357a658ecaae91c96 1295 Pfam PF05170 AsmA family 27 195 1.0E-9 T 23-10-2018 IPR007844 AsmA DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 Gene3D G3DSA:3.40.50.1700 331 581 4.7E-67 T 23-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 345 580 9.8E-48 T 23-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 SUPERFAMILY SSF52279 345 583 1.31E-46 T 23-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 PRINTS PR00133 Glycosyl hydrolase family 3 signature 34 50 2.1E-7 T 23-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 PRINTS PR00133 Glycosyl hydrolase family 3 signature 247 265 2.1E-7 T 23-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 Pfam PF14310 Fibronectin type III-like domain 617 687 6.5E-20 T 23-10-2018 IPR026891 Fibronectin type III-like domain DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 Gene3D G3DSA:2.60.40.10 583 700 4.0E-30 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 SMART SM01217 617 687 7.5E-26 T 23-10-2018 IPR026891 Fibronectin type III-like domain DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 SUPERFAMILY SSF51445 7 344 4.74E-78 T 23-10-2018 IPR017853 Glycoside hydrolase superfamily DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 247 264 - T 23-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 DLM_2822 9dee51e5a61db433daf981aadc5fe2ea 786 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 88 313 2.1E-50 T 23-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DLM_3388 e64629fd19df9995d538bf40d2cac3f8 514 Gene3D G3DSA:3.30.870.10 37 220 3.5E-32 T 23-10-2018 DLM_3388 e64629fd19df9995d538bf40d2cac3f8 514 Gene3D G3DSA:3.30.870.10 228 375 1.8E-22 T 23-10-2018 DLM_3388 e64629fd19df9995d538bf40d2cac3f8 514 SMART SM00155 317 344 1.5 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_3388 e64629fd19df9995d538bf40d2cac3f8 514 SMART SM00155 141 168 4.9 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_3388 e64629fd19df9995d538bf40d2cac3f8 514 SUPERFAMILY SSF56024 35 235 1.48E-42 T 23-10-2018 DLM_3388 e64629fd19df9995d538bf40d2cac3f8 514 SUPERFAMILY SSF56024 250 387 2.47E-32 T 23-10-2018 DLM_3388 e64629fd19df9995d538bf40d2cac3f8 514 Pfam PF13091 PLD-like domain 59 161 7.5E-9 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_3388 e64629fd19df9995d538bf40d2cac3f8 514 Pfam PF13091 PLD-like domain 251 371 5.1E-20 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_1815 4889c37491d94cc32a084261b6116c70 193 Gene3D G3DSA:3.40.50.450 1 193 2.2E-76 T 23-10-2018 DLM_1815 4889c37491d94cc32a084261b6116c70 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 1.1E-61 T 23-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DLM_1815 4889c37491d94cc32a084261b6116c70 193 SUPERFAMILY SSF102405 1 179 1.07E-61 T 23-10-2018 DLM_1815 4889c37491d94cc32a084261b6116c70 193 Pfam PF03641 Possible lysine decarboxylase 46 174 2.7E-42 T 23-10-2018 IPR031100 LOG family DLM_0325 c60895f9fd9d80e872631bcda103643a 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 1.7E-55 T 23-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 1.7E-55 T 23-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 1.7E-55 T 23-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 1.7E-55 T 23-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 1.7E-55 T 23-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 1.7E-55 T 23-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 Gene3D G3DSA:1.10.8.540 503 591 3.3E-25 T 23-10-2018 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 23-10-2018 IPR025505 FHIPEP conserved site DLM_0325 c60895f9fd9d80e872631bcda103643a 694 PIRSF PIRSF005419 4 694 6.6E-252 T 23-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 Gene3D G3DSA:3.40.30.60 359 502 7.2E-55 T 23-10-2018 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 15 689 3.8E-276 T 23-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 Gene3D G3DSA:1.10.490.80 594 689 1.2E-12 T 23-10-2018 DLM_0325 c60895f9fd9d80e872631bcda103643a 694 Pfam PF00771 FHIPEP family 25 680 2.8E-274 T 23-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DLM_3875 cb7856e23f2d6e47c49c4f378e56929a 538 PIRSF PIRSF500060 11 531 7.3E-239 T 23-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria DLM_3875 cb7856e23f2d6e47c49c4f378e56929a 538 Pfam PF01645 Conserved region in glutamate synthase 157 474 2.3E-81 T 23-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DLM_3875 cb7856e23f2d6e47c49c4f378e56929a 538 SUPERFAMILY SSF51395 9 501 1.41E-139 T 23-10-2018 DLM_3875 cb7856e23f2d6e47c49c4f378e56929a 538 PIRSF PIRSF006429 7 538 8.8E-164 T 23-10-2018 IPR024188 Glutamate synthase large subunit-like protein DLM_3875 cb7856e23f2d6e47c49c4f378e56929a 538 Gene3D G3DSA:3.20.20.70 149 503 6.4E-110 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 33 277 6.8E-45 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 Gene3D G3DSA:3.40.50.620 32 315 9.2E-102 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 SUPERFAMILY SSF52374 32 314 6.44E-85 T 23-10-2018 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 32 321 43.473 T 23-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 64 77 5.6E-12 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 47 5.6E-12 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 203 213 5.6E-12 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 219 227 5.6E-12 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 49 60 5.6E-12 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 32 298 2.6E-115 T 23-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 DLM_2883 2aac680878f7eac9de679d1a82bf30ae 321 Gene3D G3DSA:3.40.50.620 107 251 9.2E-102 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1322 77eb7d234191eafc390132765d5a8e88 541 SUPERFAMILY SSF58104 240 541 3.27E-71 T 23-10-2018 DLM_1322 77eb7d234191eafc390132765d5a8e88 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 181 6.4E-18 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_1322 77eb7d234191eafc390132765d5a8e88 541 SMART SM00283 279 540 2.2E-72 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1322 77eb7d234191eafc390132765d5a8e88 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 507 1.6E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1322 77eb7d234191eafc390132765d5a8e88 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 2.6E-5 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1322 77eb7d234191eafc390132765d5a8e88 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 2.6E-5 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1322 77eb7d234191eafc390132765d5a8e88 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 2.6E-5 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1322 77eb7d234191eafc390132765d5a8e88 541 SMART SM00304 271 324 70.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1322 77eb7d234191eafc390132765d5a8e88 541 SMART SM00304 210 264 2.2E-4 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1322 77eb7d234191eafc390132765d5a8e88 541 Gene3D G3DSA:1.10.287.950 210 541 4.4E-76 T 23-10-2018 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 Gene3D G3DSA:1.10.10.60 393 438 7.7E-6 T 23-10-2018 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 SMART SM00382 153 296 1.6E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 SUPERFAMILY SSF52540 133 372 1.56E-70 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 Gene3D G3DSA:1.10.8.60 304 377 2.7E-18 T 23-10-2018 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 157 170 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 Gene3D G3DSA:3.30.450.20 5 116 4.3E-6 T 23-10-2018 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 Pfam PF08448 PAS fold 17 115 3.0E-6 T 23-10-2018 IPR013656 PAS fold-4 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 Gene3D G3DSA:3.40.50.300 120 303 9.4E-66 T 23-10-2018 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 SUPERFAMILY SSF55785 9 114 2.28E-5 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 Pfam PF00158 Sigma-54 interaction domain 133 299 1.9E-65 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_1497 b72d9fcd96cf3ad4a635719d4beef858 447 SUPERFAMILY SSF46689 344 438 3.18E-6 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0036 5ff8b735dd9c2d7b59a3f957dc62b997 413 SUPERFAMILY SSF102114 17 408 3.92E-106 T 23-10-2018 DLM_0036 5ff8b735dd9c2d7b59a3f957dc62b997 413 Pfam PF06969 HemN C-terminal domain 336 397 1.1E-12 T 23-10-2018 IPR010723 HemN, C-terminal DLM_0036 5ff8b735dd9c2d7b59a3f957dc62b997 413 Pfam PF04055 Radical SAM superfamily 23 204 3.6E-19 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_0036 5ff8b735dd9c2d7b59a3f957dc62b997 413 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 19 384 1.1E-103 T 23-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 DLM_0036 5ff8b735dd9c2d7b59a3f957dc62b997 413 Gene3D G3DSA:3.80.30.20 10 333 1.6E-98 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DLM_0036 5ff8b735dd9c2d7b59a3f957dc62b997 413 SMART SM00729 18 251 7.2E-52 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_1608 4322f3be9cc45cfafaca29f5daeeb444 440 SUPERFAMILY SSF48452 52 130 1.41E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_1608 4322f3be9cc45cfafaca29f5daeeb444 440 Gene3D G3DSA:1.25.40.10 20 137 1.2E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_2396 7fd6e163f0919018589ba9984ec60a5f 539 SMART SM00283 277 538 1.7E-77 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2396 7fd6e163f0919018589ba9984ec60a5f 539 Gene3D G3DSA:1.10.287.950 218 539 9.3E-69 T 23-10-2018 DLM_2396 7fd6e163f0919018589ba9984ec60a5f 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 505 2.0E-46 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2396 7fd6e163f0919018589ba9984ec60a5f 539 SUPERFAMILY SSF58104 232 539 1.7E-69 T 23-10-2018 DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 Pfam PF00196 Bacterial regulatory proteins, luxR family 196 249 1.4E-22 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 SUPERFAMILY SSF46894 183 257 3.4E-22 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 SMART SM00421 194 251 1.2E-24 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 Pfam PF03472 Autoinducer binding domain 36 179 2.2E-17 T 23-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 Gene3D G3DSA:1.10.10.10 187 261 1.8E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 SUPERFAMILY SSF75516 22 183 1.96E-20 T 23-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 227 1.7E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 227 239 1.7E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 211 1.7E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 Gene3D G3DSA:3.30.450.80 6 186 2.9E-57 T 23-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily DLM_3435 f65327a22603b2e643735eb52d22eb6a 263 ProSitePatterns PS00622 LuxR-type HTH domain signature. 211 238 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1362 f350613c4eb1e16442111f50baedf2da 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 107 7.4E-28 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_1362 f350613c4eb1e16442111f50baedf2da 216 Gene3D G3DSA:1.10.3720.10 5 214 4.1E-42 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1362 f350613c4eb1e16442111f50baedf2da 216 SUPERFAMILY SSF161098 13 204 7.06E-36 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1362 f350613c4eb1e16442111f50baedf2da 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 210 7.0E-13 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0181 aed37574ecd2b0e38b2d8619c030aa29 119 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 89 1.0E-11 T 23-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DLM_0181 aed37574ecd2b0e38b2d8619c030aa29 119 Gene3D G3DSA:1.20.1290.10 1 112 2.7E-33 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DLM_0181 aed37574ecd2b0e38b2d8619c030aa29 119 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 3.4E-19 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DLM_0181 aed37574ecd2b0e38b2d8619c030aa29 119 SUPERFAMILY SSF69118 13 112 7.33E-26 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 Gene3D G3DSA:1.10.1790.10 64 165 1.6E-28 T 23-10-2018 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 SMART SM01061 1 59 8.8E-25 T 23-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 SUPERFAMILY SSF63520 169 272 2.88E-22 T 23-10-2018 IPR036634 PRD domain superfamily GO:0006355 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 Gene3D G3DSA:2.30.24.10 1 53 1.9E-21 T 23-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 Pfam PF03123 CAT RNA binding domain 1 52 4.9E-21 T 23-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 SUPERFAMILY SSF50151 1 53 5.23E-16 T 23-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 Pfam PF00874 PRD domain 179 271 4.8E-15 T 23-10-2018 IPR011608 PRD domain GO:0006355 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 Pfam PF00874 PRD domain 89 162 3.1E-18 T 23-10-2018 IPR011608 PRD domain GO:0006355 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 SUPERFAMILY SSF63520 59 164 6.8E-23 T 23-10-2018 IPR036634 PRD domain superfamily GO:0006355 DLM_3114 cb4a1bbc63d9dc9cfb918f50f6e5c573 278 Gene3D G3DSA:1.10.1790.10 167 275 2.4E-29 T 23-10-2018 DLM_1503 6473f744c5de27e8d6323a2ff4f1c4b6 166 Pfam PF09626 Dihaem cytochrome c 44 157 3.0E-35 T 23-10-2018 IPR018588 Dihaem cytochrome c DLM_1503 6473f744c5de27e8d6323a2ff4f1c4b6 166 SUPERFAMILY SSF48695 2 157 1.85E-5 T 23-10-2018 IPR036280 Multiheme cytochrome superfamily DLM_1363 811836cc36e1f221dad8c5b9846e2dc6 222 Gene3D G3DSA:1.10.3720.10 3 216 7.6E-44 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1363 811836cc36e1f221dad8c5b9846e2dc6 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 205 1.3E-16 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1363 811836cc36e1f221dad8c5b9846e2dc6 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 2.8E-28 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_1363 811836cc36e1f221dad8c5b9846e2dc6 222 SUPERFAMILY SSF161098 15 202 3.53E-39 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1799 da3514353e54e86c01c719d1b30ad582 766 Pfam PF01580 FtsK/SpoIIIE family 384 593 1.9E-68 T 23-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DLM_1799 da3514353e54e86c01c719d1b30ad582 766 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 197 1.9E-44 T 23-10-2018 IPR025199 DNA translocase FtsK, 4TM region DLM_1799 da3514353e54e86c01c719d1b30ad582 766 Gene3D G3DSA:1.10.10.10 696 760 1.0E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1799 da3514353e54e86c01c719d1b30ad582 766 SMART SM00843 699 764 2.5E-39 T 23-10-2018 IPR018541 FtsK gamma domain DLM_1799 da3514353e54e86c01c719d1b30ad582 766 Gene3D G3DSA:3.40.50.300 381 679 8.1E-119 T 23-10-2018 DLM_1799 da3514353e54e86c01c719d1b30ad582 766 SUPERFAMILY SSF52540 357 665 1.27E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1799 da3514353e54e86c01c719d1b30ad582 766 SUPERFAMILY SSF46785 699 763 4.42E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1799 da3514353e54e86c01c719d1b30ad582 766 Pfam PF09397 Ftsk gamma domain 701 761 5.1E-27 T 23-10-2018 IPR018541 FtsK gamma domain DLM_1799 da3514353e54e86c01c719d1b30ad582 766 SMART SM00382 419 614 8.2E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1799 da3514353e54e86c01c719d1b30ad582 766 Gene3D G3DSA:3.30.980.40 276 380 1.2E-31 T 23-10-2018 DLM_4499 ba360b1b1f5c3050d5623d8e6bf58435 297 SMART SM00448 3 118 2.9E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4499 ba360b1b1f5c3050d5623d8e6bf58435 297 Gene3D G3DSA:3.30.565.10 146 296 9.5E-8 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4499 ba360b1b1f5c3050d5623d8e6bf58435 297 SUPERFAMILY SSF52172 3 143 4.13E-38 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4499 ba360b1b1f5c3050d5623d8e6bf58435 297 Pfam PF00072 Response regulator receiver domain 6 118 5.8E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4499 ba360b1b1f5c3050d5623d8e6bf58435 297 Gene3D G3DSA:3.40.50.2300 2 145 1.6E-35 T 23-10-2018 DLM_4499 ba360b1b1f5c3050d5623d8e6bf58435 297 Pfam PF13581 Histidine kinase-like ATPase domain 172 291 2.7E-12 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3606 2db983cf25f02e12b368befa6e90dbfc 107 Pfam PF11191 Protein of unknown function (DUF2782) 22 107 1.1E-32 T 23-10-2018 IPR021357 Protein of unknown function DUF2782 DLM_3606 2db983cf25f02e12b368befa6e90dbfc 107 Gene3D G3DSA:2.20.130.30 33 107 1.7E-27 T 23-10-2018 DLM_0441 22e7c199910fa532a11fccc18869d7cd 219 SUPERFAMILY SSF100950 3 147 2.26E-45 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_0441 22e7c199910fa532a11fccc18869d7cd 219 Gene3D G3DSA:3.40.50.1360 8 208 6.8E-76 T 23-10-2018 DLM_0441 22e7c199910fa532a11fccc18869d7cd 219 SUPERFAMILY SSF75445 128 199 1.09E-22 T 23-10-2018 DLM_0441 22e7c199910fa532a11fccc18869d7cd 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 4 218 33.099 T 23-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DLM_0441 22e7c199910fa532a11fccc18869d7cd 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 214 2.7E-59 T 23-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DLM_0441 22e7c199910fa532a11fccc18869d7cd 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 8 215 3.1E-69 T 23-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DLM_0441 22e7c199910fa532a11fccc18869d7cd 219 Gene3D G3DSA:3.30.70.260 126 197 6.8E-76 T 23-10-2018 DLM_1204 23731d21b17b86d93af979172a26a957 326 Pfam PF00248 Aldo/keto reductase family 16 305 6.8E-71 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain DLM_1204 23731d21b17b86d93af979172a26a957 326 Gene3D G3DSA:3.20.20.100 1 324 1.9E-108 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_1204 23731d21b17b86d93af979172a26a957 326 SUPERFAMILY SSF51430 1 311 2.23E-94 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_3464 dac2ee9ac33f0077fb8f058873b86b75 180 Gene3D G3DSA:2.160.10.10 4 179 8.2E-57 T 23-10-2018 DLM_3464 dac2ee9ac33f0077fb8f058873b86b75 180 SUPERFAMILY SSF51161 8 176 9.15E-45 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_3464 dac2ee9ac33f0077fb8f058873b86b75 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 3.2E-6 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_3464 dac2ee9ac33f0077fb8f058873b86b75 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 2.4E-6 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_1865 8141eaeb19f11137efed43f3d6443335 351 Gene3D G3DSA:3.40.1030.10 81 351 2.2E-108 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_1865 8141eaeb19f11137efed43f3d6443335 351 SUPERFAMILY SSF52418 85 348 8.77E-99 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_1865 8141eaeb19f11137efed43f3d6443335 351 Pfam PF00591 Glycosyl transferase family, a/b domain 85 335 2.8E-98 T 23-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_1865 8141eaeb19f11137efed43f3d6443335 351 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 15 345 37.835 T 23-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DLM_1865 8141eaeb19f11137efed43f3d6443335 351 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 17 344 9.6E-129 T 23-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DLM_1865 8141eaeb19f11137efed43f3d6443335 351 Pfam PF02885 Glycosyl transferase family, helical bundle domain 16 76 6.4E-16 T 23-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_1865 8141eaeb19f11137efed43f3d6443335 351 SUPERFAMILY SSF47648 13 80 4.58E-18 T 23-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DLM_1865 8141eaeb19f11137efed43f3d6443335 351 Gene3D G3DSA:1.20.970.10 9 80 8.4E-30 T 23-10-2018 DLM_1403 fa6a64ef52bca19b4e0c38b8b9702ed6 548 Pfam PF08031 Berberine and berberine like 485 542 2.0E-12 T 23-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 DLM_1403 fa6a64ef52bca19b4e0c38b8b9702ed6 548 Gene3D G3DSA:3.30.465.40 10 531 8.5E-124 T 23-10-2018 DLM_1403 fa6a64ef52bca19b4e0c38b8b9702ed6 548 SUPERFAMILY SSF56176 30 220 7.48E-23 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_1403 fa6a64ef52bca19b4e0c38b8b9702ed6 548 Gene3D G3DSA:3.40.462.20 227 515 8.5E-124 T 23-10-2018 DLM_1403 fa6a64ef52bca19b4e0c38b8b9702ed6 548 Pfam PF01565 FAD binding domain 31 180 1.1E-12 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DLM_0143 a3075b30693bba9c74e37d72bef98117 301 SUPERFAMILY SSF53850 92 297 1.71E-38 T 23-10-2018 DLM_0143 a3075b30693bba9c74e37d72bef98117 301 SUPERFAMILY SSF46785 2 111 2.15E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0143 a3075b30693bba9c74e37d72bef98117 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0143 a3075b30693bba9c74e37d72bef98117 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0143 a3075b30693bba9c74e37d72bef98117 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0143 a3075b30693bba9c74e37d72bef98117 301 Gene3D G3DSA:3.40.190.290 92 298 1.2E-37 T 23-10-2018 DLM_0143 a3075b30693bba9c74e37d72bef98117 301 Gene3D G3DSA:1.10.10.10 1 86 6.7E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0143 a3075b30693bba9c74e37d72bef98117 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.1E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0143 a3075b30693bba9c74e37d72bef98117 301 Pfam PF03466 LysR substrate binding domain 92 291 3.2E-38 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0235 8b1e6aab2b5f00bd74f708a00b6d91d7 465 SUPERFAMILY SSF51261 271 463 3.19E-36 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_0235 8b1e6aab2b5f00bd74f708a00b6d91d7 465 Pfam PF01551 Peptidase family M23 367 460 4.7E-23 T 23-10-2018 IPR016047 Peptidase M23 DLM_0235 8b1e6aab2b5f00bd74f708a00b6d91d7 465 Gene3D G3DSA:2.70.70.10 328 464 4.3E-30 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_4188 a77c76822129edd34a4cc0e9cf34d597 320 PIRSF PIRSF004486 3 312 5.3E-101 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DLM_4188 a77c76822129edd34a4cc0e9cf34d597 320 SUPERFAMILY SSF81799 116 215 6.54E-33 T 23-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DLM_4188 a77c76822129edd34a4cc0e9cf34d597 320 SUPERFAMILY SSF53335 8 310 1.88E-45 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4188 a77c76822129edd34a4cc0e9cf34d597 320 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 7 310 6.0E-113 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DLM_4188 a77c76822129edd34a4cc0e9cf34d597 320 Gene3D G3DSA:3.40.50.150 11 310 2.0E-103 T 23-10-2018 DLM_4188 a77c76822129edd34a4cc0e9cf34d597 320 Pfam PF01795 MraW methylase family 6 310 8.4E-110 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DLM_4188 a77c76822129edd34a4cc0e9cf34d597 320 Gene3D G3DSA:1.10.150.170 114 216 2.0E-103 T 23-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DLM_4188 a77c76822129edd34a4cc0e9cf34d597 320 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 311 37.689 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DLM_0945 8564f6ae878aeafe65e300931a93eea1 471 PIRSF PIRSF006060 1 454 2.7E-68 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_0945 8564f6ae878aeafe65e300931a93eea1 471 Pfam PF13520 Amino acid permease 12 421 1.3E-42 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_0945 8564f6ae878aeafe65e300931a93eea1 471 TIGRFAM TIGR00908 2A0305: ethanolamine permease 7 452 3.2E-189 T 23-10-2018 IPR004757 Ethanolamine permease DLM_0945 8564f6ae878aeafe65e300931a93eea1 471 Gene3D G3DSA:1.20.1740.10 8 458 1.4E-59 T 23-10-2018 DLM_1298 c7924583ba3722b5ca390d303ee9f643 286 SUPERFAMILY SSF53098 107 266 1.19E-38 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1298 c7924583ba3722b5ca390d303ee9f643 286 Pfam PF13276 HTH-like domain 45 98 5.5E-11 T 23-10-2018 IPR025948 HTH-like domain DLM_1298 c7924583ba3722b5ca390d303ee9f643 286 Gene3D G3DSA:3.30.420.10 107 254 2.9E-19 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1298 c7924583ba3722b5ca390d303ee9f643 286 Pfam PF13683 Integrase core domain 197 263 4.1E-30 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_2984 6cb3235d832a6f6d216d6ff4f438e06f 225 Pfam PF01965 DJ-1/PfpI family 27 223 4.2E-15 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DLM_2984 6cb3235d832a6f6d216d6ff4f438e06f 225 Gene3D G3DSA:3.40.50.880 1 225 7.4E-82 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2984 6cb3235d832a6f6d216d6ff4f438e06f 225 SUPERFAMILY SSF52317 1 225 2.58E-74 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2093 7a42ccbd8027874318f4753e8148cbc7 183 Pfam PF05069 Phage virion morphogenesis family 93 180 1.0E-6 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_2093 7a42ccbd8027874318f4753e8148cbc7 183 Pfam PF05069 Phage virion morphogenesis family 14 87 2.0E-6 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_0405 dd2c3abe9a67a4a1cd0d4287cf62e9a0 340 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 6 340 1.2E-141 T 23-10-2018 IPR013399 CRISPR-associated protein Csy3 DLM_0405 dd2c3abe9a67a4a1cd0d4287cf62e9a0 340 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 7 337 3.3E-151 T 23-10-2018 IPR013399 CRISPR-associated protein Csy3 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF00990 Diguanylate cyclase, GGDEF domain 959 1116 2.7E-48 T 23-10-2018 IPR000160 GGDEF domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SUPERFAMILY SSF55785 839 946 1.29E-25 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SUPERFAMILY SSF55785 713 827 5.8E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:3.30.450.20 831 957 5.2E-30 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SUPERFAMILY SSF55785 322 451 2.44E-16 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF13426 PAS domain 845 946 1.3E-12 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 214 332 1.0E-10 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 461 590 1.6E-10 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 385 456 5.5E-6 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 839 955 2.4E-13 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 591 701 5.3E-16 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 705 827 5.5E-10 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:3.20.20.450 1135 1392 1.1E-89 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF13493 Domain of unknown function (DUF4118) 104 206 2.1E-11 T 23-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 955 1119 1.3E-42 T 23-10-2018 IPR000160 GGDEF domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00091 708 776 0.022 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00091 465 533 5.4E-4 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00091 211 277 7.6E-5 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00091 834 900 1.1E-6 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00091 588 654 3.2E-12 T 23-10-2018 IPR000014 PAS domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:3.30.450.20 201 336 3.4E-22 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SUPERFAMILY SSF55073 964 1122 4.55E-51 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:2.10.70.100 408 454 3.2E-15 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:2.10.70.100 780 827 1.5E-10 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:2.10.70.100 537 585 2.7E-11 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:3.30.450.20 708 777 1.6E-19 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:3.30.450.20 337 404 1.6E-11 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:3.30.450.20 461 534 6.6E-15 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SUPERFAMILY SSF55785 599 704 5.83E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF08447 PAS fold 361 447 2.6E-11 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF08447 PAS fold 733 820 4.1E-18 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF08447 PAS fold 488 576 1.4E-14 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SUPERFAMILY SSF55785 208 323 2.39E-18 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:3.30.450.20 589 707 1.7E-20 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF00989 PAS fold 588 692 8.1E-13 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF08448 PAS fold 220 326 4.1E-18 T 23-10-2018 IPR013656 PAS fold-4 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00086 783 826 7.0E-7 T 23-10-2018 IPR001610 PAC motif DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00086 906 948 2.0E-7 T 23-10-2018 IPR001610 PAC motif DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00086 540 583 1.2E-9 T 23-10-2018 IPR001610 PAC motif DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00086 283 325 4.9 T 23-10-2018 IPR001610 PAC motif DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00086 659 696 170.0 T 23-10-2018 IPR001610 PAC motif DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00086 411 453 1.2E-7 T 23-10-2018 IPR001610 PAC motif DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SUPERFAMILY SSF141868 1136 1391 3.4E-84 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SUPERFAMILY SSF55785 470 585 5.32E-21 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00052 1130 1376 6.5E-94 T 23-10-2018 IPR001633 EAL domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Gene3D G3DSA:3.30.70.270 958 1134 1.1E-61 T 23-10-2018 DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 Pfam PF00563 EAL domain 1136 1371 1.4E-69 T 23-10-2018 IPR001633 EAL domain DLM_0962 f9c566278feab4dffb57d50253f8288d 1399 SMART SM00267 948 1120 6.9E-68 T 23-10-2018 IPR000160 GGDEF domain DLM_0200 5b804650189bd2a168040a8e348aa23c 312 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 300 3.3E-22 T 23-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain DLM_0200 5b804650189bd2a168040a8e348aa23c 312 SUPERFAMILY SSF161111 19 221 1.7E-52 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DLM_0200 5b804650189bd2a168040a8e348aa23c 312 Gene3D G3DSA:3.30.70.1350 221 303 5.8E-22 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DLM_0200 5b804650189bd2a168040a8e348aa23c 312 SUPERFAMILY SSF160240 223 302 5.75E-23 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DLM_0200 5b804650189bd2a168040a8e348aa23c 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 301 1.7E-61 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DLM_0200 5b804650189bd2a168040a8e348aa23c 312 Gene3D G3DSA:1.20.1510.10 22 220 5.9E-58 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DLM_0200 5b804650189bd2a168040a8e348aa23c 312 Pfam PF01545 Cation efflux family 27 220 6.9E-45 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DLM_1374 93602df57ea5cd783809d0466d3f649c 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 30.604 T 23-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1374 93602df57ea5cd783809d0466d3f649c 101 SUPERFAMILY SSF51278 1 101 6.41E-46 T 23-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1374 93602df57ea5cd783809d0466d3f649c 101 Gene3D G3DSA:2.10.150.10 1 101 5.6E-47 T 23-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1374 93602df57ea5cd783809d0466d3f649c 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 6.4E-42 T 23-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1374 93602df57ea5cd783809d0466d3f649c 101 Pfam PF00699 Urease beta subunit 3 99 3.5E-44 T 23-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_3939 316e2f6667713b67b9a9df75a68d26fd 217 Pfam PF01411 tRNA synthetases class II (A) 14 86 5.0E-6 T 23-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DLM_3939 316e2f6667713b67b9a9df75a68d26fd 217 SUPERFAMILY SSF50447 2 83 2.12E-13 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_3939 316e2f6667713b67b9a9df75a68d26fd 217 SUPERFAMILY SSF55186 84 210 9.16E-25 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DLM_3939 316e2f6667713b67b9a9df75a68d26fd 217 Gene3D G3DSA:2.40.30.130 1 83 7.3E-14 T 23-10-2018 DLM_3939 316e2f6667713b67b9a9df75a68d26fd 217 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 2.0E-6 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DLM_3939 316e2f6667713b67b9a9df75a68d26fd 217 Gene3D G3DSA:3.30.980.10 84 212 2.5E-26 T 23-10-2018 DLM_3939 316e2f6667713b67b9a9df75a68d26fd 217 SMART SM00863 166 208 2.9E-6 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 SUPERFAMILY SSF46689 207 254 1.34E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 SMART SM00342 170 252 1.8E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 Pfam PF12833 Helix-turn-helix domain 177 253 2.9E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 248 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 SUPERFAMILY SSF55785 40 139 4.89E-9 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 Gene3D G3DSA:3.30.450.20 28 145 1.0E-10 T 23-10-2018 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 Pfam PF08448 PAS fold 41 145 1.0E-17 T 23-10-2018 IPR013656 PAS fold-4 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 SUPERFAMILY SSF46689 154 203 1.25E-5 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 1.5E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 1.5E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_1553 c1fc73198dc27a524bfbf20c7f1ccb2e 258 Gene3D G3DSA:1.10.10.60 153 256 5.9E-29 T 23-10-2018 DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.8E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.8E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.8E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 SUPERFAMILY SSF46785 3 113 2.56E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 Pfam PF03466 LysR substrate binding domain 89 290 6.4E-42 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 Gene3D G3DSA:1.10.10.10 3 93 6.0E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 Gene3D G3DSA:3.40.190.290 94 295 4.5E-45 T 23-10-2018 DLM_0958 913a6d080916bfcca0595882d1d6e0be 312 SUPERFAMILY SSF53850 90 296 2.71E-42 T 23-10-2018 DLM_3304 34fe03102b854f6dd4eaf6d821982ded 80 SUPERFAMILY SSF54736 1 79 9.94E-32 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DLM_3304 34fe03102b854f6dd4eaf6d821982ded 80 Gene3D G3DSA:3.30.1390.10 1 80 6.0E-40 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DLM_3304 34fe03102b854f6dd4eaf6d821982ded 80 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 1 75 1.9E-34 T 23-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 DLM_3304 34fe03102b854f6dd4eaf6d821982ded 80 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 1 75 25.576 T 23-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DLM_0860 34e9473ee7bfacf0f53b5e29967fd16e 254 Gene3D G3DSA:3.40.190.10 25 246 1.8E-77 T 23-10-2018 DLM_0860 34e9473ee7bfacf0f53b5e29967fd16e 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 248 1.7E-63 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_0860 34e9473ee7bfacf0f53b5e29967fd16e 254 Gene3D G3DSA:3.40.190.10 109 207 1.8E-77 T 23-10-2018 DLM_0860 34e9473ee7bfacf0f53b5e29967fd16e 254 SUPERFAMILY SSF53850 1 251 1.63E-68 T 23-10-2018 DLM_0860 34e9473ee7bfacf0f53b5e29967fd16e 254 SMART SM00062 23 250 1.4E-69 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3631 0fe39c0da4b811d746f714a780b5a6c9 433 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_3631 0fe39c0da4b811d746f714a780b5a6c9 433 SUPERFAMILY SSF103473 4 428 3.53E-68 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3631 0fe39c0da4b811d746f714a780b5a6c9 433 Pfam PF00083 Sugar (and other) transporter 46 430 7.1E-53 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DLM_3631 0fe39c0da4b811d746f714a780b5a6c9 433 Gene3D G3DSA:1.10.286.90 196 222 1.5E-6 T 23-10-2018 DLM_3319 a0f2b3151b0e9b2a6e373cebcb9f4f69 299 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 34 164 1.2E-61 T 23-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 DLM_3319 a0f2b3151b0e9b2a6e373cebcb9f4f69 299 Gene3D G3DSA:1.10.8.300 196 297 2.5E-25 T 23-10-2018 DLM_3319 a0f2b3151b0e9b2a6e373cebcb9f4f69 299 SUPERFAMILY SSF52540 15 278 4.43E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3319 a0f2b3151b0e9b2a6e373cebcb9f4f69 299 PIRSF PIRSF002849 1 297 1.4E-118 T 23-10-2018 DLM_3319 a0f2b3151b0e9b2a6e373cebcb9f4f69 299 Gene3D G3DSA:3.40.50.300 2 193 2.2E-46 T 23-10-2018 DLM_0254 6faa49349e9e8ad6b1408669b86a4534 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 1.7E-26 T 23-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DLM_0254 6faa49349e9e8ad6b1408669b86a4534 107 Gene3D G3DSA:3.30.160.100 1 104 4.2E-35 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like DLM_0254 6faa49349e9e8ad6b1408669b86a4534 107 SUPERFAMILY SSF69754 1 99 6.02E-34 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like DLM_0254 6faa49349e9e8ad6b1408669b86a4534 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.1E-30 T 23-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DLM_3195 d3d01cddbc3cdace361ae8a9b7f47a23 236 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 188 231 3.3E-10 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DLM_3195 d3d01cddbc3cdace361ae8a9b7f47a23 236 SUPERFAMILY SSF55186 91 233 1.24E-29 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DLM_3195 d3d01cddbc3cdace361ae8a9b7f47a23 236 Gene3D G3DSA:2.40.30.130 1 89 2.0E-13 T 23-10-2018 DLM_3195 d3d01cddbc3cdace361ae8a9b7f47a23 236 Pfam PF01411 tRNA synthetases class II (A) 12 92 2.7E-6 T 23-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DLM_3195 d3d01cddbc3cdace361ae8a9b7f47a23 236 SUPERFAMILY SSF50447 4 89 5.3E-11 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_3195 d3d01cddbc3cdace361ae8a9b7f47a23 236 Gene3D G3DSA:3.30.980.10 91 236 3.8E-29 T 23-10-2018 DLM_3195 d3d01cddbc3cdace361ae8a9b7f47a23 236 SMART SM00863 188 231 1.1E-13 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DLM_3098 7d283950625eae1e9cb7d2d00b6bbf08 225 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 218 1.3E-75 T 23-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 DLM_3098 7d283950625eae1e9cb7d2d00b6bbf08 225 Gene3D G3DSA:3.40.50.300 24 150 2.7E-29 T 23-10-2018 DLM_3098 7d283950625eae1e9cb7d2d00b6bbf08 225 Gene3D G3DSA:1.10.8.60 153 219 1.6E-23 T 23-10-2018 DLM_3098 7d283950625eae1e9cb7d2d00b6bbf08 225 SMART SM00382 36 146 2.7E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3098 7d283950625eae1e9cb7d2d00b6bbf08 225 Pfam PF00308 Bacterial dnaA protein 39 198 3.8E-13 T 23-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DLM_3098 7d283950625eae1e9cb7d2d00b6bbf08 225 SUPERFAMILY SSF52540 27 198 5.67E-21 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0303 e17b4335ccd794cafb1e6a08f0c06cf4 151 SMART SM00347 30 130 1.8E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_0303 e17b4335ccd794cafb1e6a08f0c06cf4 151 SUPERFAMILY SSF46785 10 136 1.97E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0303 e17b4335ccd794cafb1e6a08f0c06cf4 151 Pfam PF12802 MarR family 36 93 4.5E-12 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_0303 e17b4335ccd794cafb1e6a08f0c06cf4 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 103 - T 23-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DLM_0303 e17b4335ccd794cafb1e6a08f0c06cf4 151 Gene3D G3DSA:1.10.10.10 2 141 1.8E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1767 922bd19bd19ba61f8fd4d8b2ea23fcba 467 Gene3D G3DSA:1.10.3210.10 256 446 2.2E-17 T 23-10-2018 DLM_1767 922bd19bd19ba61f8fd4d8b2ea23fcba 467 SUPERFAMILY SSF141868 50 227 6.41E-5 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1767 922bd19bd19ba61f8fd4d8b2ea23fcba 467 Pfam PF08668 HDOD domain 259 381 2.1E-9 T 23-10-2018 IPR013976 Metal-dependent hydrolase HDOD DLM_1767 922bd19bd19ba61f8fd4d8b2ea23fcba 467 SUPERFAMILY SSF109604 257 455 5.96E-28 T 23-10-2018 DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 Gene3D G3DSA:1.10.10.10 1 73 2.4E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 Pfam PF07729 FCD domain 90 211 3.1E-23 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 Gene3D G3DSA:1.20.120.530 87 218 1.1E-25 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 SMART SM00895 88 212 5.4E-20 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 SMART SM00345 7 66 9.7E-21 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 6.5E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 6.5E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 66 1.4E-20 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 SUPERFAMILY SSF48008 89 217 1.2E-25 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1365 a794b9e5c92707ffdb77a88752ff7fea 224 SUPERFAMILY SSF46785 2 70 3.35E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1104 4f3a63347da2c2aad4117b8e1c8f2ee3 284 SUPERFAMILY SSF64518 1 283 1.44E-52 T 23-10-2018 DLM_1104 4f3a63347da2c2aad4117b8e1c8f2ee3 284 PRINTS PR00207 Flagellin signature 75 94 5.9E-12 T 23-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DLM_1104 4f3a63347da2c2aad4117b8e1c8f2ee3 284 PRINTS PR00207 Flagellin signature 36 53 5.9E-12 T 23-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DLM_1104 4f3a63347da2c2aad4117b8e1c8f2ee3 284 PRINTS PR00207 Flagellin signature 110 133 5.9E-12 T 23-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DLM_1104 4f3a63347da2c2aad4117b8e1c8f2ee3 284 Gene3D G3DSA:1.20.1330.10 53 235 2.0E-35 T 23-10-2018 DLM_1104 4f3a63347da2c2aad4117b8e1c8f2ee3 284 Gene3D G3DSA:1.10.8.410 236 283 2.1E-12 T 23-10-2018 DLM_1104 4f3a63347da2c2aad4117b8e1c8f2ee3 284 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 5.9E-23 T 23-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DLM_1104 4f3a63347da2c2aad4117b8e1c8f2ee3 284 Pfam PF00700 Bacterial flagellin C-terminal helical region 199 283 4.5E-13 T 23-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 PRINTS PR00799 Aspartate aminotransferase signature 356 381 3.3E-39 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 PRINTS PR00799 Aspartate aminotransferase signature 289 301 3.3E-39 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 PRINTS PR00799 Aspartate aminotransferase signature 258 277 3.3E-39 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 PRINTS PR00799 Aspartate aminotransferase signature 424 442 3.3E-39 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 Pfam PF00155 Aminotransferase class I and II 111 475 6.3E-81 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 SUPERFAMILY SSF53383 81 480 1.27E-118 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 Gene3D G3DSA:3.90.1150.10 88 475 3.3E-165 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 Gene3D G3DSA:3.40.640.10 143 383 3.3E-165 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1047 4f2fdde14d46e859d0651f46be9392d0 481 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 326 339 - T 23-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 SMART SM00354 6 79 7.4E-30 T 23-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 SUPERFAMILY SSF47413 8 64 1.46E-14 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 23-10-2018 DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 3.4E-16 T 23-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 68 240 1.3E-12 T 23-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 Gene3D G3DSA:3.40.50.2300 160 334 2.1E-29 T 23-10-2018 DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 Gene3D G3DSA:3.40.50.2300 68 158 1.6E-20 T 23-10-2018 DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 SUPERFAMILY SSF53822 66 321 4.52E-49 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_4434 2363c61f86e7282c74532498c5e0c43f 334 Gene3D G3DSA:1.10.260.40 7 67 7.7E-24 T 23-10-2018 DLM_0552 1d6b38f33b337008f7a2b436211c37f5 328 SUPERFAMILY SSF51735 4 143 8.09E-42 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0552 1d6b38f33b337008f7a2b436211c37f5 328 SUPERFAMILY SSF55347 124 299 2.78E-28 T 23-10-2018 DLM_0552 1d6b38f33b337008f7a2b436211c37f5 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 131 234 7.6E-7 T 23-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DLM_0552 1d6b38f33b337008f7a2b436211c37f5 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 1.9E-23 T 23-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DLM_0552 1d6b38f33b337008f7a2b436211c37f5 328 Gene3D G3DSA:3.30.360.10 138 267 3.0E-104 T 23-10-2018 DLM_0552 1d6b38f33b337008f7a2b436211c37f5 328 Gene3D G3DSA:3.40.50.720 5 321 3.0E-104 T 23-10-2018 DLM_0552 1d6b38f33b337008f7a2b436211c37f5 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 2 325 3.7E-128 T 23-10-2018 IPR030827 Inositol 2-dehydrogenase DLM_1748 c55e701d7d7535854afc3a073604333e 509 PRINTS PR00067 Catalase signature 339 365 6.6E-67 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 PRINTS PR00067 Catalase signature 104 122 6.6E-67 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 PRINTS PR00067 Catalase signature 144 162 6.6E-67 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 PRINTS PR00067 Catalase signature 307 334 6.6E-67 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 PRINTS PR00067 Catalase signature 42 65 6.6E-67 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 PRINTS PR00067 Catalase signature 125 142 6.6E-67 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 SUPERFAMILY SSF56634 22 499 3.66E-193 T 23-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 Pfam PF06628 Catalase-related immune-responsive 433 493 3.9E-18 T 23-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 Pfam PF00199 Catalase 29 405 1.4E-168 T 23-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 Gene3D G3DSA:2.40.180.10 25 509 3.7E-212 T 23-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DLM_1748 c55e701d7d7535854afc3a073604333e 509 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 352 360 - T 23-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 ProSitePatterns PS00438 Catalase proximal active site signature. 65 81 - T 23-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 SMART SM01060 29 409 1.6E-246 T 23-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1748 c55e701d7d7535854afc3a073604333e 509 PIRSF PIRSF038928 20 499 2.1E-183 T 23-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DLM_1348 0ba493dcbcaf88c8bd43d8e2ce9c6e59 509 Pfam PF07690 Major Facilitator Superfamily 14 401 1.1E-46 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1348 0ba493dcbcaf88c8bd43d8e2ce9c6e59 509 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 4.7E-8 T 23-10-2018 DLM_1348 0ba493dcbcaf88c8bd43d8e2ce9c6e59 509 PRINTS PR01036 Tetracycline resistance protein TetB signature 399 418 4.7E-8 T 23-10-2018 DLM_1348 0ba493dcbcaf88c8bd43d8e2ce9c6e59 509 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 4.7E-8 T 23-10-2018 DLM_1348 0ba493dcbcaf88c8bd43d8e2ce9c6e59 509 SUPERFAMILY SSF103473 10 498 1.48E-48 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1348 0ba493dcbcaf88c8bd43d8e2ce9c6e59 509 Gene3D G3DSA:1.20.1720.10 10 217 1.3E-40 T 23-10-2018 DLM_1409 2e28d7bb0b456b05f8bb3db0b6ac37d3 422 SUPERFAMILY SSF103473 31 416 1.83E-61 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1409 2e28d7bb0b456b05f8bb3db0b6ac37d3 422 Gene3D G3DSA:1.20.1250.20 35 418 3.8E-51 T 23-10-2018 DLM_1409 2e28d7bb0b456b05f8bb3db0b6ac37d3 422 ProSitePatterns PS00216 Sugar transport proteins signature 1. 94 110 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_1409 2e28d7bb0b456b05f8bb3db0b6ac37d3 422 Pfam PF07690 Major Facilitator Superfamily 45 264 3.3E-28 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2237 1ce8ca81fffa83f91d870b635fab3143 291 SUPERFAMILY SSF160467 4 96 4.71E-16 T 23-10-2018 DLM_2237 1ce8ca81fffa83f91d870b635fab3143 291 Gene3D G3DSA:2.40.100.10 85 290 6.2E-53 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily DLM_2237 1ce8ca81fffa83f91d870b635fab3143 291 SMART SM00796 3 225 4.9E-66 T 23-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DLM_2237 1ce8ca81fffa83f91d870b635fab3143 291 SUPERFAMILY SSF50891 91 247 3.6E-29 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily DLM_2237 1ce8ca81fffa83f91d870b635fab3143 291 Gene3D G3DSA:3.30.1360.40 1 82 8.7E-13 T 23-10-2018 DLM_2237 1ce8ca81fffa83f91d870b635fab3143 291 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 4 223 4.7E-51 T 23-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DLM_3156 728ed3881786674fdc744171151ae2c4 328 Gene3D G3DSA:3.40.190.290 112 311 3.2E-55 T 23-10-2018 DLM_3156 728ed3881786674fdc744171151ae2c4 328 Pfam PF03466 LysR substrate binding domain 110 313 8.5E-42 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3156 728ed3881786674fdc744171151ae2c4 328 Gene3D G3DSA:1.10.10.10 19 101 2.2E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3156 728ed3881786674fdc744171151ae2c4 328 SUPERFAMILY SSF53850 111 316 9.77E-44 T 23-10-2018 DLM_3156 728ed3881786674fdc744171151ae2c4 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 84 8.8E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3156 728ed3881786674fdc744171151ae2c4 328 SUPERFAMILY SSF46785 19 133 1.07E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 SUPERFAMILY SSF53732 14 611 3.14E-199 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 SUPERFAMILY SSF52016 634 895 1.45E-72 T 23-10-2018 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 Pfam PF00330 Aconitase family (aconitate hydratase) 68 561 9.1E-166 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 Gene3D G3DSA:3.30.499.10 369 615 5.3E-89 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 ProSitePatterns PS01244 Aconitase family signature 2. 492 505 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 Gene3D G3DSA:3.30.499.20 5 368 4.0E-146 T 23-10-2018 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 Gene3D G3DSA:3.20.19.10 650 896 5.3E-97 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 895 0.0 T 23-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 Pfam PF00694 Aconitase C-terminal domain 690 822 8.1E-40 T 23-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 430 441 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 145 158 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 198 211 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 169 177 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 212 227 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 274 287 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 368 382 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 492 505 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2188 66ef7900a5639694567bc1cd838cb8b8 897 PRINTS PR00415 Aconitase family signature 288 301 1.4E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1750 a1465d66a7079ccf80b574759541dba5 360 SUPERFAMILY SSF46458 5 148 6.47E-24 T 23-10-2018 IPR009050 Globin-like superfamily DLM_1750 a1465d66a7079ccf80b574759541dba5 360 Pfam PF11563 Protoglobin 4 156 2.0E-31 T 23-10-2018 DLM_1750 a1465d66a7079ccf80b574759541dba5 360 Gene3D G3DSA:1.10.490.10 3 157 2.5E-34 T 23-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DLM_1750 a1465d66a7079ccf80b574759541dba5 360 SMART SM00471 178 315 2.4E-7 T 23-10-2018 IPR003607 HD/PDEase domain DLM_1750 a1465d66a7079ccf80b574759541dba5 360 Gene3D G3DSA:1.10.3210.10 158 358 1.1E-71 T 23-10-2018 DLM_1750 a1465d66a7079ccf80b574759541dba5 360 Pfam PF01966 HD domain 184 305 2.9E-15 T 23-10-2018 IPR006674 HD domain DLM_1750 a1465d66a7079ccf80b574759541dba5 360 SUPERFAMILY SSF109604 158 346 1.54E-38 T 23-10-2018 DLM_2142 5c117d9e78fd41264a57965f678d613a 712 SUPERFAMILY SSF53955 499 705 2.7E-6 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_2142 5c117d9e78fd41264a57965f678d613a 712 Pfam PF01551 Peptidase family M23 54 151 2.1E-9 T 23-10-2018 IPR016047 Peptidase M23 DLM_2142 5c117d9e78fd41264a57965f678d613a 712 Gene3D G3DSA:2.70.70.10 24 171 9.2E-14 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_2142 5c117d9e78fd41264a57965f678d613a 712 SUPERFAMILY SSF51261 34 149 2.51E-9 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_1991 33f71b138b853787105d774a26b28dbe 354 Pfam PF11740 Plasmid replication region DNA-binding N-term 7 118 1.2E-25 T 23-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain DLM_2711 e93c0b5ff7c6f33f3dcfb31831b85331 122 Pfam PF00072 Response regulator receiver domain 7 118 1.3E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2711 e93c0b5ff7c6f33f3dcfb31831b85331 122 SMART SM00448 5 118 2.1E-32 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2711 e93c0b5ff7c6f33f3dcfb31831b85331 122 Gene3D G3DSA:3.40.50.12740 5 121 3.7E-38 T 23-10-2018 DLM_2711 e93c0b5ff7c6f33f3dcfb31831b85331 122 SUPERFAMILY SSF52172 6 119 4.98E-35 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0932 5f96372bedf866141c244c782fd22338 717 SUPERFAMILY SSF56935 32 717 1.15E-109 T 23-10-2018 DLM_0932 5f96372bedf866141c244c782fd22338 717 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 717 8.0E-106 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DLM_0932 5f96372bedf866141c244c782fd22338 717 Pfam PF00593 TonB dependent receptor 343 714 3.1E-36 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DLM_0932 5f96372bedf866141c244c782fd22338 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 172 1.3E-17 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_0932 5f96372bedf866141c244c782fd22338 717 Gene3D G3DSA:2.40.170.20 186 717 1.7E-74 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_0932 5f96372bedf866141c244c782fd22338 717 Gene3D G3DSA:2.170.130.10 58 185 2.7E-27 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DLM_1045 a143f51e0dfe213598dd4cb4172978f7 124 Gene3D G3DSA:2.60.120.10 3 114 3.9E-28 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_1045 a143f51e0dfe213598dd4cb4172978f7 124 SUPERFAMILY SSF51182 18 114 1.45E-18 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_1045 a143f51e0dfe213598dd4cb4172978f7 124 Pfam PF05899 Protein of unknown function (DUF861) 39 112 5.9E-16 T 23-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 Pfam PF00672 HAMP domain 360 411 1.8E-11 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 Gene3D G3DSA:3.30.450.20 52 327 2.7E-47 T 23-10-2018 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 Gene3D G3DSA:1.10.287.950 360 691 6.3E-75 T 23-10-2018 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 656 4.2E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 SUPERFAMILY SSF58104 382 691 5.89E-73 T 23-10-2018 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 SMART SM00304 360 414 8.5E-14 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 Gene3D G3DSA:3.30.450.20 65 235 2.7E-47 T 23-10-2018 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 SMART SM00283 429 690 4.2E-68 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3952 8f4f970c067bf8b0420bbf6ca20c080f 691 Pfam PF02743 Cache domain 175 323 2.0E-16 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_4326 8b303d91d548ceb2d253165644b5cb1c 109 SUPERFAMILY SSF54913 1 99 1.41E-36 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DLM_4326 8b303d91d548ceb2d253165644b5cb1c 109 Pfam PF03091 CutA1 divalent ion tolerance protein 1 97 2.0E-36 T 23-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 DLM_4326 8b303d91d548ceb2d253165644b5cb1c 109 Gene3D G3DSA:3.30.70.120 1 108 1.0E-39 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DLM_4406 031686a3c56690c53daebc54b2629c30 131 SUPERFAMILY SSF56047 2 130 1.57E-47 T 23-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4406 031686a3c56690c53daebc54b2629c30 131 Gene3D G3DSA:3.30.1370.30 2 73 1.5E-27 T 23-10-2018 DLM_4406 031686a3c56690c53daebc54b2629c30 131 Pfam PF00410 Ribosomal protein S8 5 130 2.0E-48 T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4406 031686a3c56690c53daebc54b2629c30 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4406 031686a3c56690c53daebc54b2629c30 131 Gene3D G3DSA:3.30.1490.10 74 131 6.3E-25 T 23-10-2018 DLM_4406 031686a3c56690c53daebc54b2629c30 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.122 T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_3680 1b833813159975dd92bb7093d4da37a1 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 270 1.0E-73 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DLM_3680 1b833813159975dd92bb7093d4da37a1 278 PIRSF PIRSF005917 1 275 1.8E-94 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DLM_3680 1b833813159975dd92bb7093d4da37a1 278 Gene3D G3DSA:3.30.950.10 107 227 3.1E-41 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DLM_3680 1b833813159975dd92bb7093d4da37a1 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 199 3.3E-25 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_3680 1b833813159975dd92bb7093d4da37a1 278 Gene3D G3DSA:3.40.1010.10 1 106 2.1E-34 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_3680 1b833813159975dd92bb7093d4da37a1 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 220 32.837 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DLM_3680 1b833813159975dd92bb7093d4da37a1 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 77 88 - T 23-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 DLM_3680 1b833813159975dd92bb7093d4da37a1 278 SUPERFAMILY SSF53790 1 218 1.27E-73 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_2975 1c000a1cc439d038a0063f6386b4a7ca 132 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 105 1.9E-17 T 23-10-2018 IPR031982 Type IV minor pilin ComP DLM_2975 1c000a1cc439d038a0063f6386b4a7ca 132 SUPERFAMILY SSF54523 7 118 7.85E-19 T 23-10-2018 DLM_2975 1c000a1cc439d038a0063f6386b4a7ca 132 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 4.9E-11 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_2975 1c000a1cc439d038a0063f6386b4a7ca 132 Gene3D G3DSA:3.30.700.10 7 131 4.2E-21 T 23-10-2018 DLM_2975 1c000a1cc439d038a0063f6386b4a7ca 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.7E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_1847 332f279732369d3fd92372cfaa88507f 522 Gene3D G3DSA:3.30.450.20 5 132 4.1E-22 T 23-10-2018 DLM_1847 332f279732369d3fd92372cfaa88507f 522 SMART SM00065 155 310 0.0028 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_1847 332f279732369d3fd92372cfaa88507f 522 Pfam PF08448 PAS fold 20 128 5.1E-22 T 23-10-2018 IPR013656 PAS fold-4 DLM_1847 332f279732369d3fd92372cfaa88507f 522 Gene3D G3DSA:1.10.3210.10 320 511 7.8E-63 T 23-10-2018 DLM_1847 332f279732369d3fd92372cfaa88507f 522 Pfam PF13185 GAF domain 153 300 1.4E-12 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_1847 332f279732369d3fd92372cfaa88507f 522 Pfam PF13487 HD domain 397 458 1.0E-17 T 23-10-2018 DLM_1847 332f279732369d3fd92372cfaa88507f 522 SUPERFAMILY SSF55781 120 300 1.22E-18 T 23-10-2018 DLM_1847 332f279732369d3fd92372cfaa88507f 522 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 129 2.2E-11 T 23-10-2018 IPR000014 PAS domain DLM_1847 332f279732369d3fd92372cfaa88507f 522 Gene3D G3DSA:3.30.450.40 133 314 1.9E-20 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_1847 332f279732369d3fd92372cfaa88507f 522 SUPERFAMILY SSF109604 333 507 7.71E-35 T 23-10-2018 DLM_1847 332f279732369d3fd92372cfaa88507f 522 SUPERFAMILY SSF55785 20 128 4.89E-20 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1847 332f279732369d3fd92372cfaa88507f 522 SMART SM00471 341 476 1.3E-7 T 23-10-2018 IPR003607 HD/PDEase domain DLM_3758 0df08216108a40d6e92ef1e398bc3789 242 SMART SM00062 23 241 0.0011 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3758 0df08216108a40d6e92ef1e398bc3789 242 SUPERFAMILY SSF53850 24 240 4.15E-35 T 23-10-2018 DLM_3758 0df08216108a40d6e92ef1e398bc3789 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 239 2.9E-19 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3758 0df08216108a40d6e92ef1e398bc3789 242 Gene3D G3DSA:3.40.190.10 29 237 1.1E-27 T 23-10-2018 DLM_3758 0df08216108a40d6e92ef1e398bc3789 242 Gene3D G3DSA:3.40.190.10 107 198 1.1E-27 T 23-10-2018 DLM_4514 6fcabc94699347ed7aefddfa92b3704d 254 SUPERFAMILY SSF55729 37 209 7.54E-37 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_4514 6fcabc94699347ed7aefddfa92b3704d 254 Gene3D G3DSA:3.40.630.30 27 244 6.0E-63 T 23-10-2018 DLM_4514 6fcabc94699347ed7aefddfa92b3704d 254 Pfam PF13302 Acetyltransferase (GNAT) domain 47 184 1.6E-11 T 23-10-2018 IPR000182 GNAT domain DLM_1326 f16bc0b80c84d85fe01c12468b83d028 220 Pfam PF00072 Response regulator receiver domain 4 111 2.6E-19 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1326 f16bc0b80c84d85fe01c12468b83d028 220 Gene3D G3DSA:1.10.10.10 119 212 9.1E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1326 f16bc0b80c84d85fe01c12468b83d028 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 136 212 8.2E-8 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_1326 f16bc0b80c84d85fe01c12468b83d028 220 SUPERFAMILY SSF52172 3 117 1.38E-28 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1326 f16bc0b80c84d85fe01c12468b83d028 220 Gene3D G3DSA:3.40.50.2300 1 118 3.0E-26 T 23-10-2018 DLM_1326 f16bc0b80c84d85fe01c12468b83d028 220 SMART SM00448 2 111 2.3E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1326 f16bc0b80c84d85fe01c12468b83d028 220 SUPERFAMILY SSF46894 120 213 3.68E-12 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_1326 f16bc0b80c84d85fe01c12468b83d028 220 SMART SM00862 136 212 2.6E-5 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_1212 6ac8e245214d30819f1f72e4e212831b 478 Gene3D G3DSA:1.20.1720.10 13 221 1.1E-42 T 23-10-2018 DLM_1212 6ac8e245214d30819f1f72e4e212831b 478 Pfam PF07690 Major Facilitator Superfamily 18 409 6.2E-43 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1212 6ac8e245214d30819f1f72e4e212831b 478 Gene3D G3DSA:1.20.1250.20 269 465 2.3E-17 T 23-10-2018 DLM_1212 6ac8e245214d30819f1f72e4e212831b 478 SUPERFAMILY SSF103473 1 457 1.44E-56 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1958 652ccd237d46333fc02e1feb7136f4ed 181 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 15 170 1.4E-40 T 23-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DLM_1958 652ccd237d46333fc02e1feb7136f4ed 181 Gene3D G3DSA:3.40.50.300 16 169 1.1E-52 T 23-10-2018 DLM_1958 652ccd237d46333fc02e1feb7136f4ed 181 Gene3D G3DSA:2.20.25.120 59 91 1.1E-52 T 23-10-2018 DLM_1958 652ccd237d46333fc02e1feb7136f4ed 181 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 15 147 5.4E-45 T 23-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DLM_1958 652ccd237d46333fc02e1feb7136f4ed 181 SUPERFAMILY SSF52540 13 174 3.94E-24 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 22 245 1.4E-85 T 23-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 Gene3D G3DSA:1.10.1740.10 8 90 1.3E-28 T 23-10-2018 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 SUPERFAMILY SSF88659 167 246 1.1E-20 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 48 61 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 PIRSF PIRSF000770 5 248 7.4E-44 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 214 240 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 PRINTS PR00046 Major sigma-70 factor signature 48 61 2.8E-9 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 PRINTS PR00046 Major sigma-70 factor signature 214 229 2.8E-9 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 PRINTS PR00046 Major sigma-70 factor signature 229 240 2.8E-9 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 PRINTS PR00046 Major sigma-70 factor signature 197 209 2.8E-9 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 SUPERFAMILY SSF88659 94 161 3.62E-13 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 Gene3D G3DSA:1.20.140.160 92 247 2.4E-44 T 23-10-2018 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 Pfam PF04542 Sigma-70 region 2 22 93 1.8E-16 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 Pfam PF04539 Sigma-70 region 3 102 166 2.9E-9 T 23-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 244 5.4E-33 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 Pfam PF04545 Sigma-70, region 4 193 242 1.7E-15 T 23-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 10 247 60.695 T 23-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DLM_0322 3e9ae67327f4b3abce379a75cc20d20a 248 SUPERFAMILY SSF88946 18 93 2.2E-22 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 ProSitePatterns PS01244 Aconitase family signature 2. 763 776 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 Pfam PF11791 Aconitate B N-terminal domain 4 156 8.0E-63 T 23-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 SUPERFAMILY SSF74778 1 160 3.14E-66 T 23-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 Gene3D G3DSA:3.30.499.10 405 532 1.1E-147 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 PIRSF PIRSF036687 1 861 0.0 T 23-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 Gene3D G3DSA:3.20.19.10 162 361 3.4E-69 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 Gene3D G3DSA:1.25.40.310 1 161 2.7E-65 T 23-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 Gene3D G3DSA:3.40.1060.10 385 684 1.1E-147 T 23-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 Gene3D G3DSA:3.30.499.10 686 864 1.4E-61 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 SUPERFAMILY SSF52016 162 372 3.92E-64 T 23-10-2018 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.4E-96 T 23-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 Pfam PF00330 Aconitase family (aconitate hydratase) 473 816 4.9E-39 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 SUPERFAMILY SSF53732 379 856 1.15E-142 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DLM_2020 f32642215dfc380c5a86a21bfda3003e 864 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 856 0.0 T 23-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DLM_0351 fb1a643f4975d52a642afced93f1d4a2 236 SUPERFAMILY SSF54292 2 105 7.18E-27 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_0351 fb1a643f4975d52a642afced93f1d4a2 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 228 1.3E-82 T 23-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0351 fb1a643f4975d52a642afced93f1d4a2 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 1.0E-31 T 23-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0351 fb1a643f4975d52a642afced93f1d4a2 236 SUPERFAMILY SSF46548 106 234 6.45E-38 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_0351 fb1a643f4975d52a642afced93f1d4a2 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0351 fb1a643f4975d52a642afced93f1d4a2 236 Gene3D G3DSA:3.10.20.30 1 105 8.3E-35 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_0351 fb1a643f4975d52a642afced93f1d4a2 236 Gene3D G3DSA:1.10.1060.10 106 236 6.0E-56 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_0351 fb1a643f4975d52a642afced93f1d4a2 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 4.8E-10 T 23-10-2018 DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 230 9.6E-24 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 PIRSF PIRSF000398 1 253 1.2E-49 T 23-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 Gene3D G3DSA:1.10.1020.10 57 151 1.2E-45 T 23-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 171 183 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 SUPERFAMILY SSF53335 5 251 4.98E-63 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0870 8d221dcbb1cee6973622019638e1fd76 253 Gene3D G3DSA:3.40.50.150 7 223 1.2E-45 T 23-10-2018 DLM_3417 09735a42c7267e2440a9806deafca68b 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 4 663 39.569 T 23-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 DLM_3417 09735a42c7267e2440a9806deafca68b 671 Gene3D G3DSA:1.10.486.10 377 539 8.6E-116 T 23-10-2018 DLM_3417 09735a42c7267e2440a9806deafca68b 671 Gene3D G3DSA:3.40.50.300 7 266 7.5E-90 T 23-10-2018 DLM_3417 09735a42c7267e2440a9806deafca68b 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 421 1.9E-33 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DLM_3417 09735a42c7267e2440a9806deafca68b 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 265 1.7E-65 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DLM_3417 09735a42c7267e2440a9806deafca68b 671 Pfam PF13361 UvrD-like helicase C-terminal domain 498 608 1.4E-28 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DLM_3417 09735a42c7267e2440a9806deafca68b 671 SUPERFAMILY SSF52540 5 631 2.58E-162 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3417 09735a42c7267e2440a9806deafca68b 671 Gene3D G3DSA:3.40.50.300 274 628 8.6E-116 T 23-10-2018 DLM_3417 09735a42c7267e2440a9806deafca68b 671 Gene3D G3DSA:1.10.10.160 111 181 7.5E-90 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 2.2E-144 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.4E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 1.4E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.4E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 1.4E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.4E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.4E-20 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 SUPERFAMILY SSF82693 45 139 1.53E-15 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Gene3D G3DSA:3.30.70.1320 142 331 1.2E-225 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Gene3D G3DSA:3.30.70.1440 658 857 1.2E-225 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 SUPERFAMILY SSF82693 142 328 2.82E-13 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Gene3D G3DSA:1.20.1640.10 17 506 1.2E-225 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 SUPERFAMILY SSF82866 298 493 6.8E-34 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Gene3D G3DSA:3.30.2090.10 709 797 1.2E-225 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Gene3D G3DSA:3.30.70.1430 45 805 1.2E-225 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Gene3D G3DSA:3.30.2090.10 184 273 1.2E-225 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Gene3D G3DSA:3.30.70.1430 558 657 1.2E-225 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 Gene3D G3DSA:1.20.1640.10 507 1009 1.2E-225 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 SUPERFAMILY SSF82714 710 795 4.97E-13 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 SUPERFAMILY SSF82866 793 1016 3.4E-42 T 23-10-2018 DLM_1220 0d4fc93a204c68607574c86efe9282a8 1022 SUPERFAMILY SSF82714 190 271 4.84E-14 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_0257 bc975e611a3951e232a9b41ecdccd3eb 184 Gene3D G3DSA:2.60.450.10 28 171 2.5E-45 T 23-10-2018 DLM_0257 bc975e611a3951e232a9b41ecdccd3eb 184 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 9 168 25.861 T 23-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 DLM_0257 bc975e611a3951e232a9b41ecdccd3eb 184 Pfam PF03968 OstA-like protein 36 146 7.9E-30 T 23-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DLM_0257 bc975e611a3951e232a9b41ecdccd3eb 184 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 26 168 2.1E-48 T 23-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 SMART SM00919 275 526 4.6E-88 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 PRINTS PR00072 Malic enzyme signature 187 209 1.7E-62 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 PRINTS PR00072 Malic enzyme signature 403 419 1.7E-62 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 PRINTS PR00072 Malic enzyme signature 302 318 1.7E-62 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 PRINTS PR00072 Malic enzyme signature 271 287 1.7E-62 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 PRINTS PR00072 Malic enzyme signature 246 264 1.7E-62 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 PRINTS PR00072 Malic enzyme signature 151 180 1.7E-62 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 PRINTS PR00072 Malic enzyme signature 91 115 1.7E-62 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 SUPERFAMILY SSF51735 275 552 6.72E-84 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 SMART SM01274 85 265 7.9E-80 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 Pfam PF00390 Malic enzyme, N-terminal domain 86 265 5.1E-61 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 PIRSF PIRSF000106 1 552 3.7E-194 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 Gene3D G3DSA:3.40.50.720 273 552 2.5E-99 T 23-10-2018 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 SUPERFAMILY SSF53223 18 274 1.73E-86 T 23-10-2018 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 Gene3D G3DSA:3.40.50.10380 21 272 1.4E-96 T 23-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DLM_1936 d0814ce88ffa168eb86f04ddef57e1f3 552 Pfam PF03949 Malic enzyme, NAD binding domain 275 524 1.9E-83 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 SUPERFAMILY SSF81338 3 233 8.37E-67 T 23-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 231 2.9E-54 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 ProSitePatterns PS00221 MIP family signature. 62 70 - T 23-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 PRINTS PR00783 Major intrinsic protein family signature 44 68 1.2E-45 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.2E-45 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 PRINTS PR00783 Major intrinsic protein family signature 81 100 1.2E-45 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.2E-45 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 PRINTS PR00783 Major intrinsic protein family signature 167 189 1.2E-45 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 PRINTS PR00783 Major intrinsic protein family signature 214 234 1.2E-45 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 Pfam PF00230 Major intrinsic protein 5 231 4.1E-44 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DLM_3906 f495c85498ff7a0e7576814546ecf858 234 Gene3D G3DSA:1.20.1080.10 1 234 1.9E-74 T 23-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DLM_0018 a33751507d3b99093a2925870ee111af 297 SUPERFAMILY SSF81606 1 243 3.4E-50 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_0018 a33751507d3b99093a2925870ee111af 297 Pfam PF13672 Protein phosphatase 2C 8 205 4.7E-14 T 23-10-2018 DLM_0018 a33751507d3b99093a2925870ee111af 297 Gene3D G3DSA:3.60.40.10 1 245 2.7E-51 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_0018 a33751507d3b99093a2925870ee111af 297 SMART SM00331 8 244 9.7E-16 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_0018 a33751507d3b99093a2925870ee111af 297 SMART SM00332 1 242 1.8E-5 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_4437 831773ceaa19aba830fa61a91097820a 233 Pfam PF01479 S4 domain 6 52 3.0E-12 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4437 831773ceaa19aba830fa61a91097820a 233 Gene3D G3DSA:3.30.70.1560 137 210 1.3E-13 T 23-10-2018 DLM_4437 831773ceaa19aba830fa61a91097820a 233 Gene3D G3DSA:3.10.290.10 1 58 1.2E-17 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_4437 831773ceaa19aba830fa61a91097820a 233 SUPERFAMILY SSF55120 83 231 7.67E-9 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_4437 831773ceaa19aba830fa61a91097820a 233 SMART SM00363 6 65 1.3E-9 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4437 831773ceaa19aba830fa61a91097820a 233 SUPERFAMILY SSF55174 4 73 4.45E-15 T 23-10-2018 DLM_4437 831773ceaa19aba830fa61a91097820a 233 Gene3D G3DSA:3.30.70.580 103 231 1.3E-13 T 23-10-2018 DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 228 246 1.8E-33 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 144 164 1.8E-33 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 186 203 1.8E-33 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 79 100 1.8E-33 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 121 143 1.8E-33 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 2 19 1.8E-33 T 23-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 1 247 4.4E-72 T 23-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 SUPERFAMILY SSF63829 2 269 5.23E-58 T 23-10-2018 DLM_3587 c13202a8e5eb2c8188d0f42c04dea218 288 Gene3D G3DSA:2.120.10.30 1 281 8.5E-92 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DLM_2437 a311d5de4536cb47c21afdce49efa0ed 304 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.1E-14 T 23-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DLM_2437 a311d5de4536cb47c21afdce49efa0ed 304 Gene3D G3DSA:1.20.1330.10 40 250 9.1E-47 T 23-10-2018 DLM_2437 a311d5de4536cb47c21afdce49efa0ed 304 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 188 6.6E-58 T 23-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 DLM_2437 a311d5de4536cb47c21afdce49efa0ed 304 SUPERFAMILY SSF64518 1 303 2.09E-56 T 23-10-2018 DLM_4123 40ef6e52240e79a37582403213674384 309 PIRSF PIRSF001438 1 308 1.8E-118 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 SUPERFAMILY SSF53850 3 217 8.01E-86 T 23-10-2018 DLM_4123 40ef6e52240e79a37582403213674384 309 Gene3D G3DSA:3.30.160.40 219 304 1.9E-24 T 23-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 Gene3D G3DSA:3.40.190.10 4 207 2.1E-85 T 23-10-2018 DLM_4123 40ef6e52240e79a37582403213674384 309 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.2E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.2E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 2.2E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.2E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.2E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 23-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 Gene3D G3DSA:3.40.190.10 101 200 2.1E-85 T 23-10-2018 DLM_4123 40ef6e52240e79a37582403213674384 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 1.5E-79 T 23-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 4.8E-16 T 23-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.608 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 SUPERFAMILY SSF54782 218 306 1.14E-24 T 23-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4123 40ef6e52240e79a37582403213674384 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 7.6E-111 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4223 c536d6991b7b6ed1d9e381d098809aa2 236 Gene3D G3DSA:3.40.30.10 14 76 1.5E-5 T 23-10-2018 DLM_4223 c536d6991b7b6ed1d9e381d098809aa2 236 SUPERFAMILY SSF52833 4 101 6.54E-9 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_4223 c536d6991b7b6ed1d9e381d098809aa2 236 Pfam PF17171 Glutathione S-transferase, C-terminal domain 166 225 1.4E-17 T 23-10-2018 IPR033468 Metaxin, glutathione S-transferase domain DLM_4223 c536d6991b7b6ed1d9e381d098809aa2 236 SUPERFAMILY SSF47616 164 228 8.91E-9 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_4223 c536d6991b7b6ed1d9e381d098809aa2 236 Pfam PF17172 Glutathione S-transferase N-terminal domain 18 113 1.6E-23 T 23-10-2018 IPR012336 Thioredoxin-like fold DLM_4223 c536d6991b7b6ed1d9e381d098809aa2 236 Gene3D G3DSA:1.20.1050.10 104 227 2.7E-8 T 23-10-2018 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Pfam PF02743 Cache domain 19 253 3.0E-14 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SUPERFAMILY SSF158472 295 344 4.58E-6 T 23-10-2018 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SUPERFAMILY SSF55785 490 595 2.42E-29 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SMART SM00086 434 474 0.001 T 23-10-2018 IPR001610 PAC motif DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SMART SM00086 553 595 3.8E-7 T 23-10-2018 IPR001610 PAC motif DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Pfam PF00563 EAL domain 788 1022 2.0E-69 T 23-10-2018 IPR001633 EAL domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SUPERFAMILY SSF141868 788 1038 9.55E-86 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Gene3D G3DSA:3.30.450.20 481 602 3.7E-35 T 23-10-2018 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Gene3D G3DSA:1.20.1480.50 259 352 9.6E-7 T 23-10-2018 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Pfam PF00990 Diguanylate cyclase, GGDEF domain 606 768 1.8E-49 T 23-10-2018 IPR000160 GGDEF domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SUPERFAMILY SSF55073 611 774 2.12E-47 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Pfam PF08447 PAS fold 384 466 1.6E-13 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SMART SM00052 782 1028 6.4E-111 T 23-10-2018 IPR001633 EAL domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Gene3D G3DSA:3.20.20.450 786 1045 1.1E-94 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Gene3D G3DSA:3.30.70.270 603 785 4.1E-62 T 23-10-2018 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SMART SM00304 294 347 3.9E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SUPERFAMILY SSF55785 376 482 2.58E-17 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 603 771 1.5E-42 T 23-10-2018 IPR000160 GGDEF domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Gene3D G3DSA:3.30.450.20 18 164 6.8E-17 T 23-10-2018 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 491 601 2.1E-19 T 23-10-2018 IPR000014 PAS domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 376 481 6.1E-6 T 23-10-2018 IPR000014 PAS domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Pfam PF13426 PAS domain 492 594 1.7E-18 T 23-10-2018 IPR000014 PAS domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Pfam PF00672 HAMP domain 294 344 3.2E-8 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 Gene3D G3DSA:3.30.450.20 355 471 2.1E-19 T 23-10-2018 DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SMART SM00267 595 772 8.4E-57 T 23-10-2018 IPR000160 GGDEF domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SMART SM00091 481 547 1.5E-6 T 23-10-2018 IPR000014 PAS domain DLM_2939 422146a97b36e83b2c9ee9ba3c10bd63 1048 SMART SM00091 356 428 5.1 T 23-10-2018 IPR000014 PAS domain DLM_0050 5252b59067b2bb9411f778eab5313621 158 Gene3D G3DSA:3.40.50.12280 2 158 3.6E-78 T 23-10-2018 DLM_0050 5252b59067b2bb9411f778eab5313621 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 41.655 T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0050 5252b59067b2bb9411f778eab5313621 158 SUPERFAMILY SSF56770 9 153 8.5E-67 T 23-10-2018 DLM_0050 5252b59067b2bb9411f778eab5313621 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 5.4E-77 T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0050 5252b59067b2bb9411f778eab5313621 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 2.5E-22 T 23-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0050 5252b59067b2bb9411f778eab5313621 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 Hamap MF_00737 Formimidoylglutamase [hutG]. 3 306 42.201 T 23-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 PRINTS PR00116 Arginase signature 117 132 8.7E-8 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 PRINTS PR00116 Arginase signature 267 281 8.7E-8 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 PRINTS PR00116 Arginase signature 232 261 8.7E-8 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 SUPERFAMILY SSF52768 7 306 3.78E-81 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 Pfam PF00491 Arginase family 37 304 4.7E-63 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 ProSitePatterns PS01053 Arginase family signature. 235 256 - T 23-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 Gene3D G3DSA:3.40.800.10 2 311 4.7E-112 T 23-10-2018 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 TIGRFAM TIGR01227 hutG: formimidoylglutamase 8 304 2.7E-95 T 23-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 DLM_3928 cbd37b89a86c9ae42d4c1a2a573960eb 311 PIRSF PIRSF036979 36 310 1.8E-29 T 23-10-2018 IPR006035 Ureohydrolase GO:0046872 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 488 8.7E-126 T 23-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 4.5E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 4.5E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 4.5E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 4.5E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 4.5E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 23-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 Gene3D G3DSA:3.40.630.10 181 496 1.5E-140 T 23-10-2018 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.6E-31 T 23-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 39.321 T 23-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 SUPERFAMILY SSF53187 180 494 7.85E-127 T 23-10-2018 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 SUPERFAMILY SSF52949 1 184 1.77E-44 T 23-10-2018 DLM_2295 a764cc1d40fe89b614fd0e734268ffb8 521 Gene3D G3DSA:3.40.220.10 1 160 5.7E-47 T 23-10-2018 DLM_1188 d32b236ebafd76718aba17baf379855a 436 SUPERFAMILY SSF48019 244 426 1.02E-73 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DLM_1188 d32b236ebafd76718aba17baf379855a 436 Gene3D G3DSA:1.10.8.60 163 232 1.2E-5 T 23-10-2018 DLM_1188 d32b236ebafd76718aba17baf379855a 436 Gene3D G3DSA:1.20.272.10 234 337 7.8E-43 T 23-10-2018 DLM_1188 d32b236ebafd76718aba17baf379855a 436 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 158 2.6E-14 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_1188 d32b236ebafd76718aba17baf379855a 436 Pfam PF16193 AAA C-terminal domain 184 259 2.6E-22 T 23-10-2018 IPR032423 AAA C-terminal domain DLM_1188 d32b236ebafd76718aba17baf379855a 436 Pfam PF12002 MgsA AAA+ ATPase C terminal 260 426 4.4E-67 T 23-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal DLM_1188 d32b236ebafd76718aba17baf379855a 436 SMART SM00382 46 163 7.7E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1188 d32b236ebafd76718aba17baf379855a 436 Gene3D G3DSA:3.40.50.300 3 162 9.5E-44 T 23-10-2018 DLM_1188 d32b236ebafd76718aba17baf379855a 436 Gene3D G3DSA:1.10.3710.10 338 436 8.5E-35 T 23-10-2018 DLM_1188 d32b236ebafd76718aba17baf379855a 436 SUPERFAMILY SSF52540 10 228 1.34E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4103 e212753430d79272f907faff26b0ab04 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 465 32.531 T 23-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DLM_4103 e212753430d79272f907faff26b0ab04 466 Pfam PF11638 DnaA N-terminal domain 6 66 1.1E-17 T 23-10-2018 IPR024633 DnaA N-terminal domain DLM_4103 e212753430d79272f907faff26b0ab04 466 Gene3D G3DSA:1.10.1750.10 373 466 2.2E-35 T 23-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DLM_4103 e212753430d79272f907faff26b0ab04 466 Gene3D G3DSA:3.40.50.300 128 296 5.4E-48 T 23-10-2018 DLM_4103 e212753430d79272f907faff26b0ab04 466 SMART SM00382 163 292 6.8E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4103 e212753430d79272f907faff26b0ab04 466 SMART SM00760 374 443 4.8E-42 T 23-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DLM_4103 e212753430d79272f907faff26b0ab04 466 Gene3D G3DSA:1.10.8.60 297 368 4.1E-25 T 23-10-2018 DLM_4103 e212753430d79272f907faff26b0ab04 466 Pfam PF00308 Bacterial dnaA protein 130 348 1.5E-89 T 23-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DLM_4103 e212753430d79272f907faff26b0ab04 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 23-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DLM_4103 e212753430d79272f907faff26b0ab04 466 SUPERFAMILY SSF52540 129 343 1.08E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4103 e212753430d79272f907faff26b0ab04 466 SUPERFAMILY SSF48295 362 466 1.94E-36 T 23-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DLM_4103 e212753430d79272f907faff26b0ab04 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 464 9.7E-177 T 23-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DLM_4103 e212753430d79272f907faff26b0ab04 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 9.2E-49 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DLM_4103 e212753430d79272f907faff26b0ab04 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 228 242 9.2E-49 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DLM_4103 e212753430d79272f907faff26b0ab04 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 262 289 9.2E-49 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DLM_4103 e212753430d79272f907faff26b0ab04 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 9.2E-49 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DLM_4103 e212753430d79272f907faff26b0ab04 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 184 9.2E-49 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DLM_4103 e212753430d79272f907faff26b0ab04 466 Gene3D G3DSA:3.30.300.180 5 116 2.5E-25 T 23-10-2018 IPR038454 DnaA, N-terminal domain superfamily DLM_4103 e212753430d79272f907faff26b0ab04 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 2.0E-31 T 23-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DLM_3478 6acab990155f624b40bef01fb4cbd635 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 37.161 T 23-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 DLM_3478 6acab990155f624b40bef01fb4cbd635 165 SUPERFAMILY SSF52833 1 163 9.84E-42 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3478 6acab990155f624b40bef01fb4cbd635 165 Gene3D G3DSA:3.40.30.10 1 165 2.0E-45 T 23-10-2018 DLM_3478 6acab990155f624b40bef01fb4cbd635 165 Pfam PF08534 Redoxin 20 162 1.7E-29 T 23-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DLM_3478 6acab990155f624b40bef01fb4cbd635 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 23-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 140 1.9E-11 T 23-10-2018 IPR000014 PAS domain DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 263 7.6E-18 T 23-10-2018 IPR000014 PAS domain DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 Pfam PF08447 PAS fold 165 251 8.2E-17 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 Pfam PF13426 PAS domain 38 134 2.3E-13 T 23-10-2018 IPR000014 PAS domain DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 Gene3D G3DSA:3.30.450.20 4 133 1.5E-19 T 23-10-2018 DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 303 434 2.3E-36 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 Gene3D G3DSA:3.30.450.20 134 246 2.6E-20 T 23-10-2018 DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 SMART SM00091 141 214 7.5E-5 T 23-10-2018 IPR000014 PAS domain DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 SMART SM00091 20 88 2.4 T 23-10-2018 IPR000014 PAS domain DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 Gene3D G3DSA:1.10.287.950 247 445 2.9E-46 T 23-10-2018 DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 SUPERFAMILY SSF58104 249 436 1.31E-50 T 23-10-2018 DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 SUPERFAMILY SSF55785 30 133 6.81E-22 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 SUPERFAMILY SSF55785 154 255 1.39E-26 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 SMART SM00283 247 442 4.8E-15 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 SMART SM00086 216 258 9.0E-6 T 23-10-2018 IPR001610 PAC motif DLM_0195 3a4d52df5c7acae10d7117e639a4e3cd 445 SMART SM00086 94 136 0.002 T 23-10-2018 IPR001610 PAC motif DLM_2852 bf160efeab4f9224c28185208f3da5d0 291 SUPERFAMILY SSF141868 49 284 6.67E-53 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2852 bf160efeab4f9224c28185208f3da5d0 291 SMART SM00052 41 288 6.5E-29 T 23-10-2018 IPR001633 EAL domain DLM_2852 bf160efeab4f9224c28185208f3da5d0 291 Gene3D G3DSA:3.20.20.450 46 290 6.2E-51 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2852 bf160efeab4f9224c28185208f3da5d0 291 Pfam PF00563 EAL domain 55 283 4.3E-42 T 23-10-2018 IPR001633 EAL domain DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 Pfam PF00742 Homoserine dehydrogenase 137 315 6.6E-63 T 23-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 SUPERFAMILY SSF51735 1 158 1.58E-38 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 23-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 Gene3D G3DSA:3.30.70.260 349 422 1.0E-165 T 23-10-2018 DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 Pfam PF01842 ACT domain 354 420 1.8E-12 T 23-10-2018 IPR002912 ACT domain DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 SUPERFAMILY SSF55021 352 423 1.3E-12 T 23-10-2018 DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 Gene3D G3DSA:3.30.360.10 136 348 1.0E-165 T 23-10-2018 DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 1.6E-21 T 23-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 PIRSF PIRSF000098 1 434 1.2E-162 T 23-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 Gene3D G3DSA:3.40.50.720 4 340 1.0E-165 T 23-10-2018 DLM_0184 1062eb14aed8ff4b4c7903d8444e4824 436 SUPERFAMILY SSF55347 137 302 2.22E-52 T 23-10-2018 DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 Pfam PF04055 Radical SAM superfamily 400 605 1.6E-20 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 400 420 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 40 666 48.475 T 23-10-2018 IPR022946 Uncharacterised protein family UPF0313 DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 Gene3D G3DSA:3.80.30.20 396 653 2.7E-16 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 SMART SM00729 396 646 8.3E-9 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 SUPERFAMILY SSF102114 380 633 1.44E-14 T 23-10-2018 DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 40 664 9.1E-258 T 23-10-2018 IPR022946 Uncharacterised protein family UPF0313 DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 Pfam PF08497 Radical SAM N-terminal 40 399 2.4E-139 T 23-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal DLM_0686 90bdcf9acb100816a4ce9f827183ed9d 774 Pfam PF11842 Domain of unknown function (DUF3362) 614 740 1.2E-44 T 23-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal DLM_0363 84896d50798898ad1ec865e91bdb193c 296 Pfam PF03466 LysR substrate binding domain 88 292 1.2E-41 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0363 84896d50798898ad1ec865e91bdb193c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0363 84896d50798898ad1ec865e91bdb193c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0363 84896d50798898ad1ec865e91bdb193c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0363 84896d50798898ad1ec865e91bdb193c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.2E-21 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0363 84896d50798898ad1ec865e91bdb193c 296 SUPERFAMILY SSF53850 90 294 2.41E-39 T 23-10-2018 DLM_0363 84896d50798898ad1ec865e91bdb193c 296 Gene3D G3DSA:1.10.10.10 1 90 9.1E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0363 84896d50798898ad1ec865e91bdb193c 296 Gene3D G3DSA:3.40.190.290 91 293 9.0E-50 T 23-10-2018 DLM_0363 84896d50798898ad1ec865e91bdb193c 296 SUPERFAMILY SSF46785 1 85 1.68E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0821 c16f5211922a6ee728bd38b47776c417 435 Gene3D G3DSA:3.30.70.100 323 415 8.6E-21 T 23-10-2018 DLM_0821 c16f5211922a6ee728bd38b47776c417 435 Gene3D G3DSA:2.30.30.60 271 318 6.6E-6 T 23-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DLM_0821 c16f5211922a6ee728bd38b47776c417 435 SUPERFAMILY SSF82861 169 253 3.14E-11 T 23-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DLM_0821 c16f5211922a6ee728bd38b47776c417 435 SUPERFAMILY SSF82689 323 422 2.09E-26 T 23-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DLM_0821 c16f5211922a6ee728bd38b47776c417 435 Pfam PF00924 Mechanosensitive ion channel 212 411 9.6E-47 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DLM_0821 c16f5211922a6ee728bd38b47776c417 435 SUPERFAMILY SSF50182 255 320 2.65E-14 T 23-10-2018 IPR010920 LSM domain superfamily DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 Pfam PF00005 ABC transporter 19 187 8.3E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 SUPERFAMILY SSF52540 4 233 1.12E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 Gene3D G3DSA:1.10.287.380 557 639 3.9E-18 T 23-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 Gene3D G3DSA:3.40.50.300 283 550 1.5E-64 T 23-10-2018 DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 Pfam PF12848 ABC transporter 226 298 9.4E-8 T 23-10-2018 IPR032781 ABC-transporter extension domain DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 Pfam PF16326 ABC transporter C-terminal domain 567 635 3.4E-18 T 23-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 SUPERFAMILY SSF52540 313 522 8.46E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 SMART SM00382 346 516 1.5E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 SMART SM00382 28 233 3.0E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 Pfam PF00005 ABC transporter 338 471 8.0E-23 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1050 4b3b77a497a40e1282eb1b4178fbdf5e 639 Gene3D G3DSA:3.40.50.300 9 281 2.2E-72 T 23-10-2018 DLM_4105 3545f64f5635d463a74bd891357024c8 120 SUPERFAMILY SSF54211 3 113 2.53E-25 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_4105 3545f64f5635d463a74bd891357024c8 120 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 13 89 6.0E-30 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DLM_4105 3545f64f5635d463a74bd891357024c8 120 Pfam PF00825 Ribonuclease P 5 111 1.1E-26 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DLM_4105 3545f64f5635d463a74bd891357024c8 120 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 5 114 16.627 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DLM_4105 3545f64f5635d463a74bd891357024c8 120 Gene3D G3DSA:3.30.230.10 1 118 7.2E-32 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DLM_4105 3545f64f5635d463a74bd891357024c8 120 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 8 113 4.8E-17 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 Gene3D G3DSA:2.40.30.10 152 262 1.2E-35 T 23-10-2018 DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 Gene3D G3DSA:3.40.50.80 265 404 3.1E-34 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 SUPERFAMILY SSF46458 1 154 9.64E-37 T 23-10-2018 IPR009050 Globin-like superfamily DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 Pfam PF00970 Oxidoreductase FAD-binding domain 159 261 2.5E-5 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 Gene3D G3DSA:1.10.490.10 1 146 7.8E-52 T 23-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 SUPERFAMILY SSF52343 264 402 2.49E-34 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 Pfam PF00042 Globin 7 103 9.7E-10 T 23-10-2018 IPR000971 Globin GO:0020037 DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 Hamap MF_01252 Flavohemoprotein [hmp]. 1 405 54.823 T 23-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 Pfam PF00175 Oxidoreductase NAD-binding domain 273 377 6.7E-15 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DLM_3278 5fa4a2e9680752a38c607debcde6289b 407 SUPERFAMILY SSF63380 152 263 8.17E-28 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_0186 0be5c2ccdfd790239ee802bd1de2df32 469 Gene3D G3DSA:3.40.50.1100 109 448 6.7E-137 T 23-10-2018 DLM_0186 0be5c2ccdfd790239ee802bd1de2df32 469 Pfam PF14821 Threonine synthase N terminus 2 79 3.5E-30 T 23-10-2018 IPR029144 Threonine synthase, N-terminal DLM_0186 0be5c2ccdfd790239ee802bd1de2df32 469 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 103 117 - T 23-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DLM_0186 0be5c2ccdfd790239ee802bd1de2df32 469 Gene3D G3DSA:3.40.50.1100 98 435 6.7E-137 T 23-10-2018 DLM_0186 0be5c2ccdfd790239ee802bd1de2df32 469 Gene3D G3DSA:3.90.1380.10 1 91 7.5E-31 T 23-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily DLM_0186 0be5c2ccdfd790239ee802bd1de2df32 469 TIGRFAM TIGR00260 thrC: threonine synthase 67 426 5.6E-72 T 23-10-2018 IPR004450 Threonine synthase-like DLM_0186 0be5c2ccdfd790239ee802bd1de2df32 469 SUPERFAMILY SSF53686 1 466 1.66E-157 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 Pfam PF08447 PAS fold 31 113 3.7E-15 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 114 2.1E-16 T 23-10-2018 IPR000014 PAS domain DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 SMART SM00283 258 526 5.4E-56 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 311 494 6.5E-40 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 Gene3D G3DSA:3.30.450.20 17 150 7.5E-26 T 23-10-2018 DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 SMART SM00091 8 74 2.3E-4 T 23-10-2018 IPR000014 PAS domain DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 SUPERFAMILY SSF55785 21 114 7.15E-27 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 SUPERFAMILY SSF58104 219 527 9.02E-65 T 23-10-2018 DLM_0141 0b2926f3d521950ca226dc74f9c27e3f 529 Gene3D G3DSA:1.10.287.950 198 527 2.6E-64 T 23-10-2018 DLM_0629 4027b676f4843046cdabaed73e449801 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.1E-43 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 6.1E-43 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.1E-43 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.1E-43 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.1E-43 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.1E-43 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0629 4027b676f4843046cdabaed73e449801 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 194 6.5E-6 T 23-10-2018 DLM_0629 4027b676f4843046cdabaed73e449801 259 Gene3D G3DSA:3.40.50.720 2 255 5.7E-83 T 23-10-2018 DLM_0629 4027b676f4843046cdabaed73e449801 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 3.2E-67 T 23-10-2018 DLM_0629 4027b676f4843046cdabaed73e449801 259 SUPERFAMILY SSF51735 8 251 2.08E-81 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.8E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.8E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0629 4027b676f4843046cdabaed73e449801 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.8E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 Pfam PF03466 LysR substrate binding domain 109 310 1.1E-20 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 SUPERFAMILY SSF53850 103 311 1.16E-38 T 23-10-2018 DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 Gene3D G3DSA:3.40.190.10 186 284 7.1E-57 T 23-10-2018 DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 SUPERFAMILY SSF46785 16 97 1.47E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 1.5E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 Gene3D G3DSA:1.10.10.10 12 101 2.7E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 1.6E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 1.6E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 1.6E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0265 5587d9ce57412de25cd69b6892cac9d7 317 Gene3D G3DSA:3.40.190.10 103 304 7.1E-57 T 23-10-2018 DLM_3880 e4643f7c0f1b1141b2863911b9414b2b 262 Gene3D G3DSA:1.10.3720.10 12 262 2.2E-54 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3880 e4643f7c0f1b1141b2863911b9414b2b 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 258 2.7E-13 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3880 e4643f7c0f1b1141b2863911b9414b2b 262 SUPERFAMILY SSF161098 5 260 3.36E-57 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1172 f6fdf13c0c96e36e28cdc3680522bff5 262 SUPERFAMILY SSF51658 1 242 7.19E-61 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_1172 f6fdf13c0c96e36e28cdc3680522bff5 262 PIRSF PIRSF006241 1 255 1.3E-72 T 23-10-2018 IPR026040 Hydroxypyruvate isomerase-like DLM_1172 f6fdf13c0c96e36e28cdc3680522bff5 262 Gene3D G3DSA:3.20.20.150 1 252 1.2E-57 T 23-10-2018 DLM_1172 f6fdf13c0c96e36e28cdc3680522bff5 262 Pfam PF01261 Xylose isomerase-like TIM barrel 21 210 1.3E-21 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 SUPERFAMILY SSF53850 26 337 2.69E-56 T 23-10-2018 DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 Gene3D G3DSA:3.40.190.10 30 311 1.8E-56 T 23-10-2018 DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 256 275 8.1E-9 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 8.1E-9 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 8.1E-9 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 8.1E-9 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 8.1E-9 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 8.1E-9 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 Pfam PF13416 Bacterial extracellular solute-binding protein 41 295 3.2E-24 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_2936 eebafd6a38bdde5af9fac1aa676bc0a7 345 Gene3D G3DSA:3.40.190.10 136 263 1.8E-56 T 23-10-2018 DLM_0053 d9781a516fdd5d2c933b362b651127a3 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 165 3.4E-41 T 23-10-2018 DLM_0053 d9781a516fdd5d2c933b362b651127a3 166 Gene3D G3DSA:3.40.30.10 83 166 6.1E-22 T 23-10-2018 DLM_0053 d9781a516fdd5d2c933b362b651127a3 166 SUPERFAMILY SSF52833 3 165 1.11E-42 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_0053 d9781a516fdd5d2c933b362b651127a3 166 Gene3D G3DSA:1.10.10.1590 2 82 4.6E-14 T 23-10-2018 DLM_0053 d9781a516fdd5d2c933b362b651127a3 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 10 165 8.6E-51 T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0053 d9781a516fdd5d2c933b362b651127a3 166 PIRSF PIRSF000216 1 166 3.8E-45 T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1655 679b2998d1f1ac97c328752361fde443 347 Pfam PF13416 Bacterial extracellular solute-binding protein 47 295 2.9E-42 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_1655 679b2998d1f1ac97c328752361fde443 347 Gene3D G3DSA:3.40.190.10 29 325 1.1E-119 T 23-10-2018 DLM_1655 679b2998d1f1ac97c328752361fde443 347 SUPERFAMILY SSF53850 26 344 9.45E-64 T 23-10-2018 DLM_1655 679b2998d1f1ac97c328752361fde443 347 Gene3D G3DSA:3.40.190.10 129 331 1.1E-119 T 23-10-2018 DLM_0128 3e22b0bf5eac5ebd3151cf7fe58c71a8 68 Pfam PF01192 RNA polymerase Rpb6 8 58 5.2E-13 T 23-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DLM_0128 3e22b0bf5eac5ebd3151cf7fe58c71a8 68 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.165 T 23-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_0128 3e22b0bf5eac5ebd3151cf7fe58c71a8 68 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 1.2E-19 T 23-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_0128 3e22b0bf5eac5ebd3151cf7fe58c71a8 68 Gene3D G3DSA:3.90.940.10 1 68 2.1E-21 T 23-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DLM_0128 3e22b0bf5eac5ebd3151cf7fe58c71a8 68 SMART SM01409 8 60 2.0E-13 T 23-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DLM_0128 3e22b0bf5eac5ebd3151cf7fe58c71a8 68 SUPERFAMILY SSF63562 1 64 6.41E-21 T 23-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 Pfam PF03466 LysR substrate binding domain 135 328 2.2E-23 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 68 78 2.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 78 89 2.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 2.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 Gene3D G3DSA:3.40.190.10 202 302 1.4E-18 T 23-10-2018 DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 SUPERFAMILY SSF46785 39 120 2.72E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 SUPERFAMILY SSF53850 128 333 7.6E-27 T 23-10-2018 DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 44 100 1.3E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 Gene3D G3DSA:3.40.190.10 130 322 1.4E-18 T 23-10-2018 DLM_1225 7fcafee68c79ee11283586fd6fbfcaf0 339 Gene3D G3DSA:1.10.10.10 37 123 7.6E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3080 3b1683663052addd3d6099d1d96144a8 472 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 389 401 - T 23-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 23-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 SMART SM01230 105 382 9.4E-150 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 SUPERFAMILY SSF54368 4 102 1.44E-32 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 471 3.8E-200 T 23-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 Gene3D G3DSA:3.30.590.10 108 460 1.1E-146 T 23-10-2018 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 Gene3D G3DSA:3.10.20.70 2 107 1.9E-34 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 Pfam PF00120 Glutamine synthetase, catalytic domain 106 469 2.6E-138 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 SUPERFAMILY SSF55931 105 471 7.16E-137 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 98 6.7E-28 T 23-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DLM_3080 3b1683663052addd3d6099d1d96144a8 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 262 277 - T 23-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DLM_3638 94d536ed01fcbd280782263bd8311822 321 SMART SM00671 105 140 1.1E-7 T 23-10-2018 IPR006597 Sel1-like repeat DLM_3638 94d536ed01fcbd280782263bd8311822 321 SMART SM00671 141 177 220.0 T 23-10-2018 IPR006597 Sel1-like repeat DLM_3638 94d536ed01fcbd280782263bd8311822 321 SUPERFAMILY SSF81901 53 219 3.92E-22 T 23-10-2018 DLM_3638 94d536ed01fcbd280782263bd8311822 321 Gene3D G3DSA:1.25.40.10 5 246 1.7E-23 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 Gene3D G3DSA:3.30.1490.110 79 161 6.4E-130 T 23-10-2018 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 SUPERFAMILY SSF53067 2 189 9.88E-64 T 23-10-2018 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 Gene3D G3DSA:3.30.420.40 189 344 6.4E-130 T 23-10-2018 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 403 31.269 T 23-10-2018 IPR020823 Cell division protein FtsA DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 SUPERFAMILY SSF53067 191 370 1.02E-52 T 23-10-2018 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 Pfam PF02491 SHS2 domain inserted in FTSA 77 153 1.0E-33 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 SMART SM00842 2 188 9.9E-110 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 PIRSF PIRSF003101 1 403 1.4E-158 T 23-10-2018 IPR020823 Cell division protein FtsA DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 2 370 8.3E-156 T 23-10-2018 IPR020823 Cell division protein FtsA DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 Gene3D G3DSA:3.90.640.10 227 292 6.4E-130 T 23-10-2018 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 Gene3D G3DSA:3.30.420.40 5 363 6.4E-130 T 23-10-2018 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 Pfam PF14450 Cell division protein FtsA 199 366 4.3E-26 T 23-10-2018 DLM_4200 8748b670881c2ade4dd36d8db7e32564 403 Pfam PF14450 Cell division protein FtsA 3 187 1.3E-11 T 23-10-2018 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PIRSF PIRSF019574 1 363 9.7E-133 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 175 194 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 307 333 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 212 231 2.4E-65 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 Gene3D G3DSA:3.40.190.10 130 357 1.1E-128 T 23-10-2018 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 SUPERFAMILY SSF53850 24 362 5.93E-99 T 23-10-2018 DLM_2555 4222ba45efa12271790faf65d96de5d2 363 Pfam PF13416 Bacterial extracellular solute-binding protein 43 328 1.9E-36 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_2555 4222ba45efa12271790faf65d96de5d2 363 Gene3D G3DSA:3.40.190.10 26 331 1.1E-128 T 23-10-2018 DLM_3374 be7589ae60282ff5b05a28afde02b202 289 SUPERFAMILY SSF53448 1 288 2.48E-92 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_3374 be7589ae60282ff5b05a28afde02b202 289 Pfam PF00483 Nucleotidyl transferase 4 240 1.7E-71 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DLM_3374 be7589ae60282ff5b05a28afde02b202 289 Gene3D G3DSA:3.90.550.10 1 289 1.4E-87 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_3374 be7589ae60282ff5b05a28afde02b202 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 289 2.0E-159 T 23-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 SUPERFAMILY SSF55785 30 132 5.06E-23 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 Gene3D G3DSA:1.10.287.950 249 436 6.4E-52 T 23-10-2018 DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 Gene3D G3DSA:3.30.450.20 18 129 5.0E-21 T 23-10-2018 DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 Gene3D G3DSA:3.30.450.20 130 248 3.2E-25 T 23-10-2018 DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 140 1.2E-15 T 23-10-2018 IPR000014 PAS domain DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 261 9.0E-17 T 23-10-2018 IPR000014 PAS domain DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 432 7.8E-38 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 SMART SM00086 215 257 3.8E-6 T 23-10-2018 IPR001610 PAC motif DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 SMART SM00086 93 135 8.0E-5 T 23-10-2018 IPR001610 PAC motif DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 Pfam PF08447 PAS fold 46 128 1.3E-13 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 Pfam PF08447 PAS fold 166 250 1.6E-16 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 SUPERFAMILY SSF55785 154 254 4.36E-26 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 SUPERFAMILY SSF58104 253 432 2.09E-54 T 23-10-2018 DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 SMART SM00091 140 207 0.0073 T 23-10-2018 IPR000014 PAS domain DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 SMART SM00091 18 87 1.4 T 23-10-2018 IPR000014 PAS domain DLM_2201 793aa97c03962dfc2d1ecdd215e1c186 439 SMART SM00283 246 439 1.1E-21 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2865 2158f89d5aa6f3d9ade5ff9c8626c151 408 Gene3D G3DSA:3.20.140.10 2 405 6.0E-150 T 23-10-2018 DLM_2865 2158f89d5aa6f3d9ade5ff9c8626c151 408 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 4 400 45.783 T 23-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DLM_2865 2158f89d5aa6f3d9ade5ff9c8626c151 408 PIRSF PIRSF000484 1 398 2.2E-72 T 23-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DLM_2865 2158f89d5aa6f3d9ade5ff9c8626c151 408 SUPERFAMILY SSF51690 122 397 2.35E-87 T 23-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DLM_2865 2158f89d5aa6f3d9ade5ff9c8626c151 408 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 398 5.0E-157 T 23-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DLM_2865 2158f89d5aa6f3d9ade5ff9c8626c151 408 SUPERFAMILY SSF54675 4 139 6.48E-41 T 23-10-2018 DLM_2865 2158f89d5aa6f3d9ade5ff9c8626c151 408 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 175 398 6.8E-77 T 23-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DLM_4335 b302737d77a74f4bfc55140338b3772a 215 Gene3D G3DSA:3.40.50.2020 1 212 8.5E-71 T 23-10-2018 DLM_4335 b302737d77a74f4bfc55140338b3772a 215 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 215 33.474 T 23-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_4335 b302737d77a74f4bfc55140338b3772a 215 SUPERFAMILY SSF53271 2 211 6.82E-47 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like DLM_4335 b302737d77a74f4bfc55140338b3772a 215 Pfam PF00156 Phosphoribosyl transferase domain 47 159 4.8E-14 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DLM_4335 b302737d77a74f4bfc55140338b3772a 215 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 186 6.2E-56 T 23-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_0191 5995f06b6902207c150420d03b78f725 470 SUPERFAMILY SSF52540 3 212 1.67E-73 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0191 5995f06b6902207c150420d03b78f725 470 Gene3D G3DSA:3.40.50.300 216 398 2.2E-48 T 23-10-2018 DLM_0191 5995f06b6902207c150420d03b78f725 470 Gene3D G3DSA:3.40.50.300 1 213 2.7E-82 T 23-10-2018 DLM_0191 5995f06b6902207c150420d03b78f725 470 Pfam PF00270 DEAD/DEAH box helicase 25 198 8.0E-51 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_0191 5995f06b6902207c150420d03b78f725 470 SMART SM00490 261 342 8.6E-32 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_0191 5995f06b6902207c150420d03b78f725 470 Pfam PF00271 Helicase conserved C-terminal domain 236 342 3.1E-27 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_0191 5995f06b6902207c150420d03b78f725 470 SUPERFAMILY SSF52540 149 355 6.52E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0191 5995f06b6902207c150420d03b78f725 470 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DLM_0191 5995f06b6902207c150420d03b78f725 470 SMART SM00487 20 225 2.3E-62 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_3676 cae55d4bb41699ce06621a146cd41b04 195 SMART SM00749 48 112 110.0 T 23-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DLM_3676 cae55d4bb41699ce06621a146cd41b04 195 SMART SM00749 127 190 1.0E-6 T 23-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DLM_3676 cae55d4bb41699ce06621a146cd41b04 195 Pfam PF04972 BON domain 47 112 3.3E-12 T 23-10-2018 IPR007055 BON domain DLM_3676 cae55d4bb41699ce06621a146cd41b04 195 Pfam PF04972 BON domain 122 183 4.6E-12 T 23-10-2018 IPR007055 BON domain DLM_1053 41f7db07f9e3205fe4ece42c0a172188 422 Pfam PF08245 Mur ligase middle domain 47 261 6.5E-9 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DLM_1053 41f7db07f9e3205fe4ece42c0a172188 422 SUPERFAMILY SSF53623 5 285 2.86E-86 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_1053 41f7db07f9e3205fe4ece42c0a172188 422 PIRSF PIRSF001563 1 421 1.9E-109 T 23-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DLM_1053 41f7db07f9e3205fe4ece42c0a172188 422 Gene3D G3DSA:3.90.190.20 287 421 3.4E-31 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_1053 41f7db07f9e3205fe4ece42c0a172188 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 285 346 2.2E-6 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DLM_1053 41f7db07f9e3205fe4ece42c0a172188 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 416 2.2E-102 T 23-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DLM_1053 41f7db07f9e3205fe4ece42c0a172188 422 SUPERFAMILY SSF53244 285 418 8.06E-31 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_1053 41f7db07f9e3205fe4ece42c0a172188 422 Gene3D G3DSA:3.40.1190.10 1 286 4.3E-89 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_0817 f2746d95adfb8da90ecb1cdaaa4c0611 247 Gene3D G3DSA:3.90.1720.10 7 163 4.9E-43 T 23-10-2018 DLM_0817 f2746d95adfb8da90ecb1cdaaa4c0611 247 SUPERFAMILY SSF54001 36 163 3.6E-42 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DLM_0817 f2746d95adfb8da90ecb1cdaaa4c0611 247 Pfam PF00877 NlpC/P60 family 55 162 1.6E-29 T 23-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DLM_2374 fa90adb7529c53cce1a3b59564e360bb 202 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 8 178 8.9E-33 T 23-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 DLM_2374 fa90adb7529c53cce1a3b59564e360bb 202 SUPERFAMILY SSF53335 9 194 3.08E-46 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2374 fa90adb7529c53cce1a3b59564e360bb 202 Gene3D G3DSA:3.40.50.150 1 200 1.3E-46 T 23-10-2018 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 Pfam PF00347 Ribosomal protein L6 1 59 3.0E-10 T 23-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 Pfam PF00347 Ribosomal protein L6 67 141 3.0E-19 T 23-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 131 139 - T 23-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 SUPERFAMILY SSF56053 60 154 1.44E-36 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 1 153 6.6E-67 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 Gene3D G3DSA:3.90.930.12 60 154 3.8E-40 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 SUPERFAMILY SSF56053 1 59 9.46E-15 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 PIRSF PIRSF002162 1 154 2.3E-44 T 23-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 PRINTS PR00059 Ribosomal protein L6 signature 48 73 2.6E-34 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 PRINTS PR00059 Ribosomal protein L6 signature 118 139 2.6E-34 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 PRINTS PR00059 Ribosomal protein L6 signature 76 92 2.6E-34 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DLM_4407 de2c0f78349486dba503f5be1e114c8d 154 Gene3D G3DSA:3.90.930.12 1 59 2.8E-17 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_0568 bca6cbf4c4c4814d32c8a2d8475eb397 309 SUPERFAMILY SSF47413 13 81 1.51E-6 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_0568 bca6cbf4c4c4814d32c8a2d8475eb397 309 Pfam PF13464 Domain of unknown function (DUF4115) 236 308 5.2E-22 T 23-10-2018 IPR025194 Domain of unknown function DUF4115 DLM_0568 bca6cbf4c4c4814d32c8a2d8475eb397 309 Gene3D G3DSA:1.10.260.40 6 105 2.2E-27 T 23-10-2018 DLM_0568 bca6cbf4c4c4814d32c8a2d8475eb397 309 SMART SM00530 17 78 0.0011 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_0568 bca6cbf4c4c4814d32c8a2d8475eb397 309 Pfam PF13413 Helix-turn-helix domain 18 78 4.7E-25 T 23-10-2018 DLM_2106 c7719ac23d6c2dcb7f5d444daed5fdf2 134 Pfam PF06252 Protein of unknown function (DUF1018) 21 129 1.2E-23 T 23-10-2018 IPR009363 Bacteriophage Mu, Gp16 DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.7E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 Pfam PF03466 LysR substrate binding domain 100 288 1.4E-24 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 Gene3D G3DSA:3.40.190.10 163 263 1.2E-18 T 23-10-2018 DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 Gene3D G3DSA:3.40.190.10 91 283 1.2E-18 T 23-10-2018 DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 Gene3D G3DSA:1.10.10.10 1 84 7.1E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 SUPERFAMILY SSF46785 1 81 4.08E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1351 e0c09cd166ac83956e4cf1cd76cbb43a 304 SUPERFAMILY SSF53850 89 293 1.71E-27 T 23-10-2018 DLM_0627 4c2967e1701cce965176ad8953ba40f0 160 SMART SM00347 29 129 1.3E-17 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_0627 4c2967e1701cce965176ad8953ba40f0 160 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 12 139 5.0E-49 T 23-10-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 DLM_0627 4c2967e1701cce965176ad8953ba40f0 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 3.7E-5 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_0627 4c2967e1701cce965176ad8953ba40f0 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 3.7E-5 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_0627 4c2967e1701cce965176ad8953ba40f0 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 3.7E-5 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_0627 4c2967e1701cce965176ad8953ba40f0 160 SUPERFAMILY SSF46785 8 142 2.31E-29 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0627 4c2967e1701cce965176ad8953ba40f0 160 Pfam PF01047 MarR family 36 93 1.3E-13 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_0627 4c2967e1701cce965176ad8953ba40f0 160 Gene3D G3DSA:1.10.10.10 5 142 8.5E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0974 7edf3a6a6577b14a383e3c02d5dd9c05 346 Gene3D G3DSA:3.40.50.300 2 265 7.7E-76 T 23-10-2018 DLM_0974 7edf3a6a6577b14a383e3c02d5dd9c05 346 Pfam PF08402 TOBE domain 272 338 4.5E-6 T 23-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DLM_0974 7edf3a6a6577b14a383e3c02d5dd9c05 346 SUPERFAMILY SSF52540 4 240 6.46E-74 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0974 7edf3a6a6577b14a383e3c02d5dd9c05 346 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0974 7edf3a6a6577b14a383e3c02d5dd9c05 346 Pfam PF00005 ABC transporter 20 163 9.2E-37 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0974 7edf3a6a6577b14a383e3c02d5dd9c05 346 SMART SM00382 28 213 1.2E-21 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0974 7edf3a6a6577b14a383e3c02d5dd9c05 346 SUPERFAMILY SSF50331 241 339 8.5E-8 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_3779 c65428bf0d3356be8e25dfce8ecdd75d 296 SMART SM00849 24 214 1.3E-20 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3779 c65428bf0d3356be8e25dfce8ecdd75d 296 Pfam PF00753 Metallo-beta-lactamase superfamily 29 214 4.5E-19 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3779 c65428bf0d3356be8e25dfce8ecdd75d 296 Gene3D G3DSA:3.60.15.10 10 296 4.1E-105 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3779 c65428bf0d3356be8e25dfce8ecdd75d 296 SUPERFAMILY SSF56281 18 295 3.11E-49 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 2.1E-71 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 22 38 1.1E-23 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 73 92 1.1E-23 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.1E-23 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 151 172 1.1E-23 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 Pfam PF00579 tRNA synthetases class I (W and Y) 11 292 1.6E-49 T 23-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 SUPERFAMILY SSF52374 12 337 1.57E-77 T 23-10-2018 DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 Gene3D G3DSA:1.10.240.10 190 305 7.9E-101 T 23-10-2018 DLM_3161 a2800b3e251f745a160a02d7cf376ee1 340 Gene3D G3DSA:3.40.50.620 12 332 7.9E-101 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0059 2f66c927fcb0ec6ac5463a3ec49e8370 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 3.2E-22 T 23-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DLM_0059 2f66c927fcb0ec6ac5463a3ec49e8370 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.163 T 23-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 DLM_1070 52e0d1a6eb7d9320fdf0d8158c1f5922 188 Gene3D G3DSA:1.10.60.30 23 97 3.6E-28 T 23-10-2018 DLM_1070 52e0d1a6eb7d9320fdf0d8158c1f5922 188 Gene3D G3DSA:1.10.60.30 100 168 6.3E-24 T 23-10-2018 DLM_1070 52e0d1a6eb7d9320fdf0d8158c1f5922 188 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 167 22.56 T 23-10-2018 IPR006839 Ribosome-associated, YjgA DLM_1070 52e0d1a6eb7d9320fdf0d8158c1f5922 188 PIRSF PIRSF016183 1 171 7.4E-66 T 23-10-2018 IPR006839 Ribosome-associated, YjgA DLM_1070 52e0d1a6eb7d9320fdf0d8158c1f5922 188 SUPERFAMILY SSF158710 23 166 2.48E-52 T 23-10-2018 IPR023153 PSPTO4464-like domain superfamily DLM_1070 52e0d1a6eb7d9320fdf0d8158c1f5922 188 Pfam PF04751 Protein of unknown function (DUF615) 14 163 4.3E-55 T 23-10-2018 IPR006839 Ribosome-associated, YjgA DLM_3665 43e386afc1e678f781192eade3cf45ca 93 PRINTS PR00124 ATP synthase C subunit signature 15 34 2.0E-5 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3665 43e386afc1e678f781192eade3cf45ca 93 PRINTS PR00124 ATP synthase C subunit signature 53 78 2.0E-5 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3665 43e386afc1e678f781192eade3cf45ca 93 PRINTS PR00124 ATP synthase C subunit signature 36 51 2.0E-5 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3665 43e386afc1e678f781192eade3cf45ca 93 SUPERFAMILY SSF81333 7 81 7.72E-18 T 23-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily DLM_3665 43e386afc1e678f781192eade3cf45ca 93 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 23-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3665 43e386afc1e678f781192eade3cf45ca 93 Hamap MF_01396 ATP synthase subunit c [atpH]. 13 78 13.637 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3665 43e386afc1e678f781192eade3cf45ca 93 Pfam PF00137 ATP synthase subunit C 14 76 1.8E-9 T 23-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DLM_3665 43e386afc1e678f781192eade3cf45ca 93 Gene3D G3DSA:1.20.20.10 5 81 1.1E-25 T 23-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3665 43e386afc1e678f781192eade3cf45ca 93 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 79 6.7E-26 T 23-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DLM_2900 c12ea953f4359ba86c53543982dbbfd5 407 Gene3D G3DSA:3.20.20.450 7 201 3.3E-18 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2900 c12ea953f4359ba86c53543982dbbfd5 407 SUPERFAMILY SSF141868 10 198 1.12E-28 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2900 c12ea953f4359ba86c53543982dbbfd5 407 PIRSF PIRSF003180 3 407 3.4E-137 T 23-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing DLM_2900 c12ea953f4359ba86c53543982dbbfd5 407 SUPERFAMILY SSF109604 186 405 2.89E-41 T 23-10-2018 DLM_2900 c12ea953f4359ba86c53543982dbbfd5 407 SMART SM00052 4 199 7.3E-6 T 23-10-2018 IPR001633 EAL domain DLM_2900 c12ea953f4359ba86c53543982dbbfd5 407 Pfam PF00563 EAL domain 56 194 2.8E-13 T 23-10-2018 IPR001633 EAL domain DLM_2900 c12ea953f4359ba86c53543982dbbfd5 407 Pfam PF08668 HDOD domain 218 324 9.0E-13 T 23-10-2018 IPR013976 Metal-dependent hydrolase HDOD DLM_2900 c12ea953f4359ba86c53543982dbbfd5 407 Gene3D G3DSA:1.10.3210.10 202 334 3.1E-24 T 23-10-2018 DLM_1912 2f8ae7fed6e32e829952f65a4b91b9f4 259 SUPERFAMILY SSF53850 24 259 7.6E-81 T 23-10-2018 DLM_1912 2f8ae7fed6e32e829952f65a4b91b9f4 259 Gene3D G3DSA:3.40.190.10 24 256 9.1E-97 T 23-10-2018 DLM_1912 2f8ae7fed6e32e829952f65a4b91b9f4 259 Pfam PF03180 NLPA lipoprotein 24 259 2.2E-96 T 23-10-2018 IPR004872 Lipoprotein NlpA family DLM_1912 2f8ae7fed6e32e829952f65a4b91b9f4 259 Gene3D G3DSA:3.40.190.10 105 209 9.1E-97 T 23-10-2018 DLM_1912 2f8ae7fed6e32e829952f65a4b91b9f4 259 PIRSF PIRSF002854 3 259 1.3E-101 T 23-10-2018 IPR004872 Lipoprotein NlpA family DLM_3215 7fd188a982d75fed80529f50afa76ab1 342 SUPERFAMILY SSF161098 92 325 4.74E-21 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3215 7fd188a982d75fed80529f50afa76ab1 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 339 2.6E-45 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0968 80409146afee6a6c852b8f92f95c67bd 106 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 6 106 4.7E-24 T 23-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DLM_0968 80409146afee6a6c852b8f92f95c67bd 106 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 106 18.904 T 23-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DLM_0968 80409146afee6a6c852b8f92f95c67bd 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 91 104 1.1E-15 T 23-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DLM_0968 80409146afee6a6c852b8f92f95c67bd 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 70 86 1.1E-15 T 23-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DLM_0968 80409146afee6a6c852b8f92f95c67bd 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 35 51 1.1E-15 T 23-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DLM_0968 80409146afee6a6c852b8f92f95c67bd 106 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 106 1.1E-31 T 23-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 Gene3D G3DSA:1.10.287.470 208 308 2.9E-14 T 23-10-2018 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 448 468 8.7E-48 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 89 8.7E-48 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 335 356 8.7E-48 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 368 392 8.7E-48 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 433 448 8.7E-48 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 108 128 8.7E-48 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 392 415 8.7E-48 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 Gene3D G3DSA:2.40.50.100 309 353 2.9E-14 T 23-10-2018 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 Pfam PF13437 HlyD family secretion protein 323 422 1.5E-15 T 23-10-2018 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 58 469 7.2E-123 T 23-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 Gene3D G3DSA:2.40.30.170 354 445 2.9E-14 T 23-10-2018 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 Gene3D G3DSA:2.40.30.170 84 94 5.4E-9 T 23-10-2018 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 Pfam PF13533 Biotin-lipoyl like 103 142 4.0E-7 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 SUPERFAMILY SSF111369 105 158 2.48E-6 T 23-10-2018 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 Gene3D G3DSA:1.10.287.470 130 204 5.4E-9 T 23-10-2018 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 Gene3D G3DSA:2.40.50.100 96 129 5.4E-9 T 23-10-2018 DLM_3697 0b1121584a2d2f1b5989adf5efbc7d8c 469 ProSitePatterns PS00543 HlyD family secretion proteins signature. 433 455 - T 23-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 DLM_2315 d210efd3850231e0c7f3a2fc95b5e5be 596 SUPERFAMILY SSF53335 400 571 5.03E-14 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2315 d210efd3850231e0c7f3a2fc95b5e5be 596 Pfam PF12147 Putative methyltransferase 272 579 3.2E-144 T 23-10-2018 IPR022744 Methyltransferase domain, putative DLM_2315 d210efd3850231e0c7f3a2fc95b5e5be 596 SUPERFAMILY SSF53474 6 278 1.27E-35 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2315 d210efd3850231e0c7f3a2fc95b5e5be 596 Pfam PF12146 Serine aminopeptidase, S33 28 264 4.6E-65 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 DLM_2315 d210efd3850231e0c7f3a2fc95b5e5be 596 Gene3D G3DSA:3.40.50.150 340 580 2.6E-13 T 23-10-2018 DLM_2315 d210efd3850231e0c7f3a2fc95b5e5be 596 Gene3D G3DSA:3.40.50.1820 2 281 1.7E-48 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0995 33267768efb94fc08fdd0bbddfd0bd59 683 PIRSF PIRSF015380 3 678 1.0E-174 T 23-10-2018 IPR011385 Putative site-specific recombinase Gcr DLM_0995 33267768efb94fc08fdd0bbddfd0bd59 683 Pfam PF10136 Site-specific recombinase 23 663 1.3E-236 T 23-10-2018 IPR011385 Putative site-specific recombinase Gcr DLM_3427 2b9f9bd1384ec88fadbe1d8ce18def65 494 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 236 3.3E-52 T 23-10-2018 IPR022488 Polyphosphate kinase-2-related DLM_3427 2b9f9bd1384ec88fadbe1d8ce18def65 494 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 268 490 7.0E-85 T 23-10-2018 IPR022488 Polyphosphate kinase-2-related DLM_3427 2b9f9bd1384ec88fadbe1d8ce18def65 494 Gene3D G3DSA:3.40.50.300 1 238 1.1E-74 T 23-10-2018 DLM_3427 2b9f9bd1384ec88fadbe1d8ce18def65 494 Gene3D G3DSA:3.40.50.300 239 492 1.0E-100 T 23-10-2018 DLM_3427 2b9f9bd1384ec88fadbe1d8ce18def65 494 SUPERFAMILY SSF52540 41 236 4.89E-13 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3427 2b9f9bd1384ec88fadbe1d8ce18def65 494 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 492 7.1E-230 T 23-10-2018 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 DLM_3427 2b9f9bd1384ec88fadbe1d8ce18def65 494 SUPERFAMILY SSF52540 300 490 1.87E-23 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4552 31fcb464fe715434d02d42bbe06f158c 520 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 128 506 8.0E-103 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_4552 31fcb464fe715434d02d42bbe06f158c 520 Gene3D G3DSA:3.40.640.10 94 388 1.8E-98 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_4552 31fcb464fe715434d02d42bbe06f158c 520 SUPERFAMILY SSF53383 122 516 2.04E-94 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4552 31fcb464fe715434d02d42bbe06f158c 520 Gene3D G3DSA:3.90.1150.10 389 519 1.7E-42 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0953 e65800c93b635fa7f3046240bb34ec3f 418 Pfam PF16539 Flagellar assembly protein T, middle domain 123 291 1.4E-13 T 23-10-2018 IPR032386 Flagellar assembly protein T, middle domain DLM_0953 e65800c93b635fa7f3046240bb34ec3f 418 Gene3D G3DSA:3.40.50.10610 120 325 3.7E-20 T 23-10-2018 DLM_0953 e65800c93b635fa7f3046240bb34ec3f 418 Gene3D G3DSA:3.30.1660.40 16 101 1.3E-6 T 23-10-2018 IPR038180 FlgT, N-terminal domain superfamily DLM_0953 e65800c93b635fa7f3046240bb34ec3f 418 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 336 412 3.0E-6 T 23-10-2018 IPR032388 Flagellar assembly protein T, C-terminal DLM_0953 e65800c93b635fa7f3046240bb34ec3f 418 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 17 95 1.8E-8 T 23-10-2018 IPR032370 Flagellar assembly protein T, N-terminal DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 191 1.7E-93 T 23-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 SUPERFAMILY SSF88659 124 187 1.31E-17 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 Pfam PF08281 Sigma-70, region 4 135 182 1.5E-17 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 Gene3D G3DSA:1.10.1740.10 1 122 1.7E-37 T 23-10-2018 DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 23-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 Pfam PF04542 Sigma-70 region 2 25 92 2.3E-19 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 SUPERFAMILY SSF88946 2 104 4.08E-30 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 Gene3D G3DSA:1.10.10.10 123 192 6.1E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1437 954ccf7e11f4687c14dc4117d3e2c395 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 1.2E-32 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DLM_0668 9dde8f571effa68daa55215ab40bfd48 559 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 182 207 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site DLM_0668 9dde8f571effa68daa55215ab40bfd48 559 Pfam PF00474 Sodium:solute symporter family 67 478 2.9E-119 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DLM_0668 9dde8f571effa68daa55215ab40bfd48 559 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 478 2.5E-61 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DLM_0668 9dde8f571effa68daa55215ab40bfd48 559 Gene3D G3DSA:1.20.1730.10 56 556 4.1E-61 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily DLM_1858 28d1503cffe993b351313eef06b0bc7d 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 7.2E-5 T 23-10-2018 DLM_1858 28d1503cffe993b351313eef06b0bc7d 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 7.2E-5 T 23-10-2018 DLM_1858 28d1503cffe993b351313eef06b0bc7d 512 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 7.2E-5 T 23-10-2018 DLM_1858 28d1503cffe993b351313eef06b0bc7d 512 Pfam PF07690 Major Facilitator Superfamily 26 418 1.4E-55 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1858 28d1503cffe993b351313eef06b0bc7d 512 Gene3D G3DSA:1.20.1720.10 22 261 2.7E-42 T 23-10-2018 DLM_1858 28d1503cffe993b351313eef06b0bc7d 512 SUPERFAMILY SSF103473 7 505 2.09E-69 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1858 28d1503cffe993b351313eef06b0bc7d 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 497 7.9E-133 T 23-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 Gene3D G3DSA:3.30.70.920 56 139 5.0E-22 T 23-10-2018 DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.9E-13 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.9E-13 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.9E-13 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 SMART SM00344 3 112 2.4E-34 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.4E-16 T 23-10-2018 DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 Gene3D G3DSA:1.10.10.10 4 55 1.2E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 SUPERFAMILY SSF46785 3 90 8.47E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 SUPERFAMILY SSF54909 67 151 4.16E-20 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_3889 c32d3487a9109376f7e5b18a050dc770 159 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.9E-22 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_0093 82bd5cec74619a299db5d17f5ba41ee1 310 Pfam PF01012 Electron transfer flavoprotein domain 4 169 4.2E-39 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_0093 82bd5cec74619a299db5d17f5ba41ee1 310 SUPERFAMILY SSF52402 3 182 6.56E-55 T 23-10-2018 DLM_0093 82bd5cec74619a299db5d17f5ba41ee1 310 SMART SM00893 3 180 1.2E-56 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_0093 82bd5cec74619a299db5d17f5ba41ee1 310 PIRSF PIRSF000089 1 310 7.9E-108 T 23-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DLM_0093 82bd5cec74619a299db5d17f5ba41ee1 310 Gene3D G3DSA:3.40.50.620 2 181 3.6E-58 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0093 82bd5cec74619a299db5d17f5ba41ee1 310 SUPERFAMILY SSF52467 187 307 4.16E-46 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DLM_0093 82bd5cec74619a299db5d17f5ba41ee1 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 188 271 2.1E-34 T 23-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DLM_0093 82bd5cec74619a299db5d17f5ba41ee1 310 Gene3D G3DSA:3.40.50.1220 182 310 3.1E-57 T 23-10-2018 DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 Gene3D G3DSA:3.40.190.10 92 290 1.2E-77 T 23-10-2018 DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 Gene3D G3DSA:1.10.10.10 1 91 2.0E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 Pfam PF03466 LysR substrate binding domain 88 292 1.6E-40 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 SUPERFAMILY SSF53850 89 292 1.07E-38 T 23-10-2018 DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 Gene3D G3DSA:3.40.190.10 163 267 1.2E-77 T 23-10-2018 DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.3E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3085 83b9a4f036fd45906975c6054e4a7cc3 305 SUPERFAMILY SSF46785 1 112 3.15E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3314 0a71e24a2a4f7b37742b7fb8a34678c4 222 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 20 218 5.6E-57 T 23-10-2018 DLM_3314 0a71e24a2a4f7b37742b7fb8a34678c4 222 SUPERFAMILY SSF53335 18 220 4.3E-40 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3314 0a71e24a2a4f7b37742b7fb8a34678c4 222 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 16 219 4.5E-60 T 23-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DLM_3314 0a71e24a2a4f7b37742b7fb8a34678c4 222 Gene3D G3DSA:3.40.50.150 4 221 6.6E-71 T 23-10-2018 DLM_3314 0a71e24a2a4f7b37742b7fb8a34678c4 222 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 23-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DLM_3314 0a71e24a2a4f7b37742b7fb8a34678c4 222 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 15 221 32.614 T 23-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DLM_1412 a964829cbe45b8bb652607e92b83a7d0 466 Pfam PF03315 Serine dehydratase beta chain 4 156 2.4E-59 T 23-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DLM_1412 a964829cbe45b8bb652607e92b83a7d0 466 Gene3D G3DSA:3.30.1330.90 11 161 1.1E-55 T 23-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DLM_1412 a964829cbe45b8bb652607e92b83a7d0 466 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 456 1.1E-219 T 23-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DLM_1412 a964829cbe45b8bb652607e92b83a7d0 466 Pfam PF03313 Serine dehydratase alpha chain 187 453 2.1E-104 T 23-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DLM_1412 a964829cbe45b8bb652607e92b83a7d0 466 SUPERFAMILY SSF143548 17 158 1.8E-46 T 23-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 Gene3D G3DSA:3.40.50.300 6 594 1.3E-246 T 23-10-2018 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 938 22.533 T 23-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 SUPERFAMILY SSF52540 1 568 1.25E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 923 0.0 T 23-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 Gene3D G3DSA:3.40.50.300 615 934 1.9E-139 T 23-10-2018 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 Gene3D G3DSA:1.10.8.280 285 402 1.3E-246 T 23-10-2018 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 SUPERFAMILY SSF52540 613 911 1.41E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 Gene3D G3DSA:1.20.1580.10 690 828 1.9E-139 T 23-10-2018 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 Gene3D G3DSA:1.20.1580.10 90 491 1.3E-246 T 23-10-2018 DLM_1399 aea772a53912b7d1ce10827393c5c69c 942 Gene3D G3DSA:3.30.190.20 130 242 1.3E-246 T 23-10-2018 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 501 1.3E-44 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 Gene3D G3DSA:1.10.287.950 217 537 4.2E-66 T 23-10-2018 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 Pfam PF17200 Single Cache domain 2 34 183 2.0E-24 T 23-10-2018 IPR033480 Single Cache domain 2 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 Gene3D G3DSA:3.30.450.20 31 181 3.1E-29 T 23-10-2018 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 203 5.9E-23 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 16 5.9E-23 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 5.9E-23 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 373 400 5.9E-23 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 SMART SM00283 275 536 1.1E-60 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 SMART SM01049 30 123 1.9E-19 T 23-10-2018 IPR033480 Single Cache domain 2 DLM_2162 9dd5e01b6e1f6e6da883804d98bd082e 537 SUPERFAMILY SSF58104 238 537 2.75E-64 T 23-10-2018 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Gene3D G3DSA:2.40.270.10 1076 1291 7.4E-84 T 23-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 SUPERFAMILY SSF64484 12 1389 0.0 T 23-10-2018 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Gene3D G3DSA:3.90.1110.10 320 467 4.5E-25 T 23-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Gene3D G3DSA:3.90.1100.10 18 175 1.1E-50 T 23-10-2018 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Gene3D G3DSA:3.90.1100.10 669 739 5.3E-21 T 23-10-2018 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Gene3D G3DSA:3.90.1800.10 1301 1387 6.3E-11 T 23-10-2018 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 227 6.3E-7 T 23-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Pfam PF04561 RNA polymerase Rpb2, domain 2 446 480 1.5E-6 T 23-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Gene3D G3DSA:2.40.50.100 740 814 1.9E-29 T 23-10-2018 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1391 12.21 T 23-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Gene3D G3DSA:2.40.50.150 855 980 4.6E-43 T 23-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1387 0.0 T 23-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Pfam PF04563 RNA polymerase beta subunit 27 525 2.2E-37 T 23-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Pfam PF00562 RNA polymerase Rpb2, domain 6 743 1313 2.9E-159 T 23-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Pfam PF04565 RNA polymerase Rpb2, domain 3 539 606 4.5E-31 T 23-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Pfam PF04560 RNA polymerase Rpb2, domain 7 1315 1388 1.8E-26 T 23-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Pfam PF10385 RNA polymerase beta subunit external 1 domain 617 682 5.7E-25 T 23-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 Gene3D G3DSA:3.90.1100.10 468 649 6.2E-72 T 23-10-2018 DLM_4384 f9c93ea8a2e9bb0f118e46459b54df68 1391 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1103 1115 - T 23-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DLM_4275 b59bd186bde96358589dd139a047e639 420 Pfam PF07676 WD40-like Beta Propeller Repeat 318 345 1.3E-4 T 23-10-2018 IPR011659 WD40-like Beta Propeller DLM_4275 b59bd186bde96358589dd139a047e639 420 Pfam PF07676 WD40-like Beta Propeller Repeat 183 216 1.6E-7 T 23-10-2018 IPR011659 WD40-like Beta Propeller DLM_4275 b59bd186bde96358589dd139a047e639 420 Pfam PF07676 WD40-like Beta Propeller Repeat 358 390 2.6E-4 T 23-10-2018 IPR011659 WD40-like Beta Propeller DLM_4275 b59bd186bde96358589dd139a047e639 420 Pfam PF07676 WD40-like Beta Propeller Repeat 226 259 1.6E-7 T 23-10-2018 IPR011659 WD40-like Beta Propeller DLM_4275 b59bd186bde96358589dd139a047e639 420 Pfam PF07676 WD40-like Beta Propeller Repeat 269 304 1.4E-12 T 23-10-2018 IPR011659 WD40-like Beta Propeller DLM_4275 b59bd186bde96358589dd139a047e639 420 SUPERFAMILY SSF69304 143 416 4.05E-57 T 23-10-2018 DLM_4275 b59bd186bde96358589dd139a047e639 420 Gene3D G3DSA:2.120.10.30 153 419 2.7E-87 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DLM_4275 b59bd186bde96358589dd139a047e639 420 Gene3D G3DSA:3.40.50.10070 10 152 3.5E-38 T 23-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 DLM_4275 b59bd186bde96358589dd139a047e639 420 Pfam PF04052 TolB amino-terminal domain 14 117 1.3E-24 T 23-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 DLM_4275 b59bd186bde96358589dd139a047e639 420 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 1 414 44.013 T 23-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 DLM_4275 b59bd186bde96358589dd139a047e639 420 SUPERFAMILY SSF52964 20 149 1.57E-31 T 23-10-2018 DLM_4275 b59bd186bde96358589dd139a047e639 420 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 6 415 6.9E-152 T 23-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 DLM_2553 593684e9e31718475ec098b21cdf81c2 296 PIRSF PIRSF000103 1 294 1.3E-78 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DLM_2553 593684e9e31718475ec098b21cdf81c2 296 SUPERFAMILY SSF48179 164 292 3.85E-41 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_2553 593684e9e31718475ec098b21cdf81c2 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 3.7E-35 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DLM_2553 593684e9e31718475ec098b21cdf81c2 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 9.1E-126 T 23-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 DLM_2553 593684e9e31718475ec098b21cdf81c2 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 23-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DLM_2553 593684e9e31718475ec098b21cdf81c2 296 SUPERFAMILY SSF51735 1 162 2.06E-45 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2553 593684e9e31718475ec098b21cdf81c2 296 Gene3D G3DSA:1.10.1040.10 164 294 1.1E-45 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DLM_2553 593684e9e31718475ec098b21cdf81c2 296 Gene3D G3DSA:3.40.50.720 1 163 4.4E-56 T 23-10-2018 DLM_2553 593684e9e31718475ec098b21cdf81c2 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 1.7E-50 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DLM_3831 5e8e122a2774b1d93cba494e44856287 202 Pfam PF01618 MotA/TolQ/ExbB proton channel family 49 181 1.1E-38 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DLM_0417 3508451442c723bf9dbf751dfe26c91c 385 Gene3D G3DSA:3.40.640.10 3 385 6.1E-124 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0417 3508451442c723bf9dbf751dfe26c91c 385 SUPERFAMILY SSF53383 4 383 3.46E-104 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0417 3508451442c723bf9dbf751dfe26c91c 385 Pfam PF00155 Aminotransferase class I and II 33 381 3.9E-62 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 SUPERFAMILY SSF53732 8 478 6.15E-165 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 299 313 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 208 221 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 222 235 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 132 145 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 146 161 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 413 426 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 121 129 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 94 107 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 PRINTS PR00415 Aconitase family signature 356 367 8.4E-47 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 Gene3D G3DSA:3.30.499.10 341 479 6.3E-47 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 Gene3D G3DSA:3.30.499.20 16 299 7.5E-98 T 23-10-2018 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 14 478 1.5E-235 T 23-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 ProSitePatterns PS00450 Aconitase family signature 1. 352 368 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 Pfam PF00330 Aconitase family (aconitate hydratase) 19 471 8.1E-156 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 ProSitePatterns PS01244 Aconitase family signature 2. 413 426 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DLM_2467 171abbd49cdb5422fb28c60a38e6f523 479 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 13 479 59.254 T 23-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DLM_1733 ac1c300952946a8a234a87180b506b3b 92 SUPERFAMILY SSF117991 6 92 3.66E-26 T 23-10-2018 IPR027471 YbeD-like domain superfamily DLM_1733 ac1c300952946a8a234a87180b506b3b 92 Gene3D G3DSA:3.30.70.260 4 92 1.5E-30 T 23-10-2018 DLM_1733 ac1c300952946a8a234a87180b506b3b 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 22.31 T 23-10-2018 IPR007454 Uncharacterised protein family UPF0250 DLM_1733 ac1c300952946a8a234a87180b506b3b 92 Pfam PF04359 Protein of unknown function (DUF493) 10 92 4.7E-29 T 23-10-2018 IPR007454 Uncharacterised protein family UPF0250 DLM_4548 f60155f2d9571f0c74b335c9ad11b764 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 24.043 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DLM_4548 f60155f2d9571f0c74b335c9ad11b764 142 SMART SM00732 4 104 4.3E-31 T 23-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DLM_4548 f60155f2d9571f0c74b335c9ad11b764 142 SUPERFAMILY SSF53098 4 138 2.28E-40 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_4548 f60155f2d9571f0c74b335c9ad11b764 142 Gene3D G3DSA:3.30.420.140 2 138 3.0E-43 T 23-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DLM_4548 f60155f2d9571f0c74b335c9ad11b764 142 Pfam PF03652 Holliday junction resolvase 5 137 8.1E-43 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DLM_4548 f60155f2d9571f0c74b335c9ad11b764 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 1.7E-36 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DLM_3567 51f71cf91f0efee0277dd488221e0cb7 582 SUPERFAMILY SSF56645 96 299 9.02E-37 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_3567 51f71cf91f0efee0277dd488221e0cb7 582 Gene3D G3DSA:2.40.110.20 133 290 1.6E-41 T 23-10-2018 DLM_3567 51f71cf91f0efee0277dd488221e0cb7 582 Gene3D G3DSA:1.20.140.10 291 448 1.1E-37 T 23-10-2018 DLM_3567 51f71cf91f0efee0277dd488221e0cb7 582 SUPERFAMILY SSF47203 289 447 2.42E-38 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_3567 51f71cf91f0efee0277dd488221e0cb7 582 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 405 424 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_3567 51f71cf91f0efee0277dd488221e0cb7 582 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 446 4.5E-34 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_3567 51f71cf91f0efee0277dd488221e0cb7 582 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 176 279 4.4E-15 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_0936 7eab137e60609651ed0fcc9f35efc0cc 525 Pfam PF03929 PepSY-associated TM region 13 373 1.8E-54 T 23-10-2018 IPR005625 PepSY-associated TM protein DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 41 709 1.6E-229 T 23-10-2018 IPR004811 RelA/SpoT family GO:0015969 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 3.0E-34 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 SUPERFAMILY SSF109604 25 206 3.3E-70 T 23-10-2018 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 SUPERFAMILY SSF55021 639 714 2.44E-7 T 23-10-2018 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 SUPERFAMILY SSF81271 390 462 2.83E-24 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 Pfam PF13291 ACT domain 639 717 5.2E-16 T 23-10-2018 IPR002912 ACT domain DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 Gene3D G3DSA:3.30.70.260 640 718 9.3E-12 T 23-10-2018 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 Gene3D G3DSA:3.30.460.10 208 340 7.2E-47 T 23-10-2018 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 SMART SM00954 250 360 3.0E-63 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 Pfam PF02824 TGS domain 403 462 4.9E-21 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 SMART SM00471 56 168 1.1E-7 T 23-10-2018 IPR003607 HD/PDEase domain DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 Gene3D G3DSA:1.10.3210.10 15 206 1.3E-76 T 23-10-2018 DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 Gene3D G3DSA:3.10.20.30 396 470 3.4E-32 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 Pfam PF13328 HD domain 41 190 3.7E-48 T 23-10-2018 IPR003607 HD/PDEase domain DLM_0129 0e94601a496e21d86a98d8e42aa117cf 718 SUPERFAMILY SSF81301 196 407 2.45E-64 T 23-10-2018 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 Gene3D G3DSA:3.50.7.10 173 379 1.6E-238 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily DLM_3369 63fa044c9a4174592cfe19549ab10804 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 Gene3D G3DSA:3.30.260.10 138 410 1.6E-238 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DLM_3369 63fa044c9a4174592cfe19549ab10804 547 SUPERFAMILY SSF54849 137 203 2.75E-24 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DLM_3369 63fa044c9a4174592cfe19549ab10804 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.7E-98 T 23-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 9.0E-259 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.948 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DLM_3369 63fa044c9a4174592cfe19549ab10804 547 SUPERFAMILY SSF52029 185 376 4.93E-84 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily DLM_3369 63fa044c9a4174592cfe19549ab10804 547 Gene3D G3DSA:1.10.560.10 8 521 1.6E-238 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily DLM_3369 63fa044c9a4174592cfe19549ab10804 547 SUPERFAMILY SSF48592 7 521 4.5E-78 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily DLM_2907 a302790bf10558d4f3cb63ee6c5fcd5d 546 Hamap MF_01227 CTP synthase [pyrG]. 2 540 51.753 T 23-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DLM_2907 a302790bf10558d4f3cb63ee6c5fcd5d 546 Pfam PF00117 Glutamine amidotransferase class-I 300 534 8.9E-58 T 23-10-2018 IPR017926 Glutamine amidotransferase DLM_2907 a302790bf10558d4f3cb63ee6c5fcd5d 546 Gene3D G3DSA:3.40.50.880 285 545 1.0E-102 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2907 a302790bf10558d4f3cb63ee6c5fcd5d 546 SUPERFAMILY SSF52317 288 542 7.1E-84 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2907 a302790bf10558d4f3cb63ee6c5fcd5d 546 TIGRFAM TIGR00337 PyrG: CTP synthase 1 535 1.2E-251 T 23-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DLM_2907 a302790bf10558d4f3cb63ee6c5fcd5d 546 Gene3D G3DSA:3.40.50.300 1 283 3.7E-133 T 23-10-2018 DLM_2907 a302790bf10558d4f3cb63ee6c5fcd5d 546 Pfam PF06418 CTP synthase N-terminus 3 265 2.2E-129 T 23-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DLM_2907 a302790bf10558d4f3cb63ee6c5fcd5d 546 SUPERFAMILY SSF52540 1 268 1.95E-124 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0283 77660f990cd67b1598e4f2bb5de9b0a7 365 Gene3D G3DSA:3.40.190.10 144 266 1.7E-44 T 23-10-2018 DLM_0283 77660f990cd67b1598e4f2bb5de9b0a7 365 Pfam PF13343 Bacterial extracellular solute-binding protein 93 312 8.0E-39 T 23-10-2018 DLM_0283 77660f990cd67b1598e4f2bb5de9b0a7 365 SUPERFAMILY SSF53850 37 358 2.22E-53 T 23-10-2018 DLM_0283 77660f990cd67b1598e4f2bb5de9b0a7 365 Gene3D G3DSA:3.40.190.10 54 314 1.7E-44 T 23-10-2018 DLM_3040 87cc006439e8bff53dccb9b8bb43d2d0 87 Pfam PF11142 Protein of unknown function (DUF2917) 8 56 3.9E-8 T 23-10-2018 IPR021317 Protein of unknown function DUF2917 DLM_3630 709a4add329c20197d9ac3425afc6214 299 Gene3D G3DSA:3.40.190.10 101 283 5.7E-33 T 23-10-2018 DLM_3630 709a4add329c20197d9ac3425afc6214 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.8E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3630 709a4add329c20197d9ac3425afc6214 299 Pfam PF03466 LysR substrate binding domain 92 287 1.3E-18 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3630 709a4add329c20197d9ac3425afc6214 299 Gene3D G3DSA:1.10.10.10 6 97 1.5E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3630 709a4add329c20197d9ac3425afc6214 299 SUPERFAMILY SSF53850 94 290 1.65E-22 T 23-10-2018 DLM_3630 709a4add329c20197d9ac3425afc6214 299 Gene3D G3DSA:3.40.190.10 158 258 5.7E-33 T 23-10-2018 DLM_3630 709a4add329c20197d9ac3425afc6214 299 SUPERFAMILY SSF46785 2 84 4.14E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1719 51f7d37f56d588db2bd0aa708f06328f 275 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 12 270 1.6E-86 T 23-10-2018 DLM_1719 51f7d37f56d588db2bd0aa708f06328f 275 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 9 270 1.3E-97 T 23-10-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 DLM_1719 51f7d37f56d588db2bd0aa708f06328f 275 SUPERFAMILY SSF52096 25 249 8.29E-19 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_1719 51f7d37f56d588db2bd0aa708f06328f 275 Gene3D G3DSA:3.90.226.10 9 260 8.7E-25 T 23-10-2018 DLM_1555 6bf8fd3d62ae5638f74c5e9a497ff82a 315 SUPERFAMILY SSF51569 5 273 2.2E-50 T 23-10-2018 DLM_1555 6bf8fd3d62ae5638f74c5e9a497ff82a 315 SMART SM01130 5 299 3.6E-42 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_1555 6bf8fd3d62ae5638f74c5e9a497ff82a 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.0E-8 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_1555 6bf8fd3d62ae5638f74c5e9a497ff82a 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.0E-8 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_1555 6bf8fd3d62ae5638f74c5e9a497ff82a 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 1.0E-8 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_1555 6bf8fd3d62ae5638f74c5e9a497ff82a 315 Gene3D G3DSA:3.20.20.70 1 314 2.2E-114 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1555 6bf8fd3d62ae5638f74c5e9a497ff82a 315 PIRSF PIRSF001365 1 313 4.9E-61 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_1555 6bf8fd3d62ae5638f74c5e9a497ff82a 315 Pfam PF00701 Dihydrodipicolinate synthetase family 6 233 1.1E-27 T 23-10-2018 IPR002220 DapA-like GO:0016829 DLM_2882 abc32dcded0109b9d7663d87612b00b3 442 Gene3D G3DSA:1.20.1740.10 5 442 1.2E-96 T 23-10-2018 DLM_2882 abc32dcded0109b9d7663d87612b00b3 442 PIRSF PIRSF006060 1 441 2.2E-77 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_2882 abc32dcded0109b9d7663d87612b00b3 442 Pfam PF13520 Amino acid permease 11 421 6.4E-62 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_2224 bcd287e698f4f986235d2019596864fb 512 Gene3D G3DSA:3.40.1010.10 1 112 6.3E-28 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_2224 bcd287e698f4f986235d2019596864fb 512 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 241 2.0E-96 T 23-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 DLM_2224 bcd287e698f4f986235d2019596864fb 512 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 261 501 2.9E-58 T 23-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 DLM_2224 bcd287e698f4f986235d2019596864fb 512 SUPERFAMILY SSF53790 1 244 1.96E-52 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_2224 bcd287e698f4f986235d2019596864fb 512 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 262 506 2.8E-73 T 23-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 DLM_2224 bcd287e698f4f986235d2019596864fb 512 Gene3D G3DSA:3.30.950.10 113 243 1.5E-46 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DLM_2224 bcd287e698f4f986235d2019596864fb 512 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 3.5E-38 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 Pfam PF00989 PAS fold 242 283 1.6E-6 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 368 525 8.1E-49 T 23-10-2018 IPR000160 GGDEF domain DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 527 3.4E-51 T 23-10-2018 IPR000160 GGDEF domain DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 Pfam PF16927 N-terminal 7TM region of histidine kinase 14 235 5.6E-56 T 23-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 SUPERFAMILY SSF55785 247 345 2.58E-12 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 SMART SM00091 236 304 2.1E-6 T 23-10-2018 IPR000014 PAS domain DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 Gene3D G3DSA:3.30.450.20 239 341 9.1E-12 T 23-10-2018 DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 SMART SM00267 357 529 2.5E-65 T 23-10-2018 IPR000160 GGDEF domain DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 SUPERFAMILY SSF55073 373 529 3.53E-51 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3362 bd1b5855d7ffe45d5bfc528a62ab9db2 558 Gene3D G3DSA:3.30.70.270 361 531 1.5E-59 T 23-10-2018 DLM_1758 a6c91d83f10edd8303aa16530de75cad 329 Gene3D G3DSA:3.40.50.720 120 260 4.9E-97 T 23-10-2018 DLM_1758 a6c91d83f10edd8303aa16530de75cad 329 SUPERFAMILY SSF51735 112 285 3.13E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1758 a6c91d83f10edd8303aa16530de75cad 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 86 1.1E-5 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_1758 a6c91d83f10edd8303aa16530de75cad 329 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 2 322 8.0E-115 T 23-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 DLM_1758 a6c91d83f10edd8303aa16530de75cad 329 SMART SM00829 11 321 8.4E-39 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DLM_1758 a6c91d83f10edd8303aa16530de75cad 329 Pfam PF00107 Zinc-binding dehydrogenase 151 263 1.1E-25 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_1758 a6c91d83f10edd8303aa16530de75cad 329 Gene3D G3DSA:3.90.180.10 14 321 4.9E-97 T 23-10-2018 DLM_1758 a6c91d83f10edd8303aa16530de75cad 329 SUPERFAMILY SSF50129 2 140 7.61E-36 T 23-10-2018 IPR011032 GroES-like superfamily DLM_2912 d8dd4a23343e6ad8d612e56224267eef 102 Gene3D G3DSA:3.10.20.280 1 89 2.1E-32 T 23-10-2018 IPR037021 RnfH superfamily DLM_2912 d8dd4a23343e6ad8d612e56224267eef 102 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 23.626 T 23-10-2018 IPR005346 RnfH protein DLM_2912 d8dd4a23343e6ad8d612e56224267eef 102 SUPERFAMILY SSF54285 4 78 9.16E-24 T 23-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DLM_2912 d8dd4a23343e6ad8d612e56224267eef 102 Pfam PF03658 RnfH family Ubiquitin 5 87 6.7E-32 T 23-10-2018 IPR005346 RnfH protein DLM_3675 f46e2b68d39cff044bda872bc11cb953 402 SUPERFAMILY SSF141868 13 243 1.96E-52 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3675 f46e2b68d39cff044bda872bc11cb953 402 SUPERFAMILY SSF103190 298 394 6.83E-10 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_3675 f46e2b68d39cff044bda872bc11cb953 402 Gene3D G3DSA:3.20.20.450 2 243 2.8E-55 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3675 f46e2b68d39cff044bda872bc11cb953 402 Gene3D G3DSA:3.30.450.20 292 400 1.4E-6 T 23-10-2018 DLM_3675 f46e2b68d39cff044bda872bc11cb953 402 SMART SM00052 1 236 2.7E-17 T 23-10-2018 IPR001633 EAL domain DLM_3675 f46e2b68d39cff044bda872bc11cb953 402 Pfam PF00563 EAL domain 11 231 7.2E-49 T 23-10-2018 IPR001633 EAL domain DLM_3550 8a99cf9828b7b50e43e9dc20f9a5af5a 204 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 194 8.0E-46 T 23-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 DLM_3550 8a99cf9828b7b50e43e9dc20f9a5af5a 204 Gene3D G3DSA:3.40.50.360 2 196 3.2E-63 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_3550 8a99cf9828b7b50e43e9dc20f9a5af5a 204 SUPERFAMILY SSF52218 3 195 1.31E-57 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_3550 8a99cf9828b7b50e43e9dc20f9a5af5a 204 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DLM_3550 8a99cf9828b7b50e43e9dc20f9a5af5a 204 Pfam PF03358 NADPH-dependent FMN reductase 12 140 1.9E-6 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DLM_0207 c3813c4240e64e847af52e1cf7544f13 190 SUPERFAMILY SSF64438 24 174 3.02E-39 T 23-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DLM_0207 c3813c4240e64e847af52e1cf7544f13 190 Gene3D G3DSA:3.30.1330.200 22 181 6.8E-42 T 23-10-2018 IPR038592 CheD-like superfamily DLM_0207 c3813c4240e64e847af52e1cf7544f13 190 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 19 176 24.395 T 23-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 DLM_0207 c3813c4240e64e847af52e1cf7544f13 190 Pfam PF03975 CheD chemotactic sensory transduction 72 171 5.7E-24 T 23-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 DLM_3395 a181826bbc9af14516ada4d14a3c8d82 584 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 23-10-2018 IPR020845 AMP-binding, conserved site DLM_3395 a181826bbc9af14516ada4d14a3c8d82 584 Pfam PF00501 AMP-binding enzyme 13 452 9.5E-93 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_3395 a181826bbc9af14516ada4d14a3c8d82 584 Gene3D G3DSA:3.40.50.12780 5 301 1.5E-51 T 23-10-2018 DLM_3395 a181826bbc9af14516ada4d14a3c8d82 584 SUPERFAMILY SSF56801 6 582 9.55E-107 T 23-10-2018 DLM_3395 a181826bbc9af14516ada4d14a3c8d82 584 Gene3D G3DSA:3.40.50.12780 306 445 4.5E-37 T 23-10-2018 DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 4.4E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 4.4E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 4.4E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 Gene3D G3DSA:3.40.50.720 8 255 7.5E-66 T 23-10-2018 DLM_4442 664acfaaec15559dacb882a3965bb19a 257 SUPERFAMILY SSF51735 14 253 2.57E-68 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.7E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.7E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.7E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.7E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.7E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_4442 664acfaaec15559dacb882a3965bb19a 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 252 2.3E-49 T 23-10-2018 DLM_4448 a4807535db6af0704fafb27720b25809 189 SUPERFAMILY SSF51161 4 160 8.73E-44 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_4448 a4807535db6af0704fafb27720b25809 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 50 3.2E-7 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_4448 a4807535db6af0704fafb27720b25809 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 1.8E-4 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_4448 a4807535db6af0704fafb27720b25809 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 51 76 2.8E-4 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_4448 a4807535db6af0704fafb27720b25809 189 Gene3D G3DSA:2.160.10.10 2 152 8.9E-48 T 23-10-2018 DLM_3225 dcc853060fbd9368bb1bda69e4483fbb 113 Gene3D G3DSA:3.10.20.30 1 113 1.6E-31 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_3225 dcc853060fbd9368bb1bda69e4483fbb 113 PRINTS PR00355 Adrenodoxin signature 61 75 1.9E-9 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DLM_3225 dcc853060fbd9368bb1bda69e4483fbb 113 PRINTS PR00355 Adrenodoxin signature 84 92 1.9E-9 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DLM_3225 dcc853060fbd9368bb1bda69e4483fbb 113 PRINTS PR00355 Adrenodoxin signature 43 53 1.9E-9 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DLM_3225 dcc853060fbd9368bb1bda69e4483fbb 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 91 2.7E-10 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DLM_3225 dcc853060fbd9368bb1bda69e4483fbb 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 112 5.5E-59 T 23-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 DLM_3225 dcc853060fbd9368bb1bda69e4483fbb 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 43 53 - T 23-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DLM_3225 dcc853060fbd9368bb1bda69e4483fbb 113 SUPERFAMILY SSF54292 7 110 1.35E-27 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_0537 273047a0a16840237bb69999b7235de4 135 Gene3D G3DSA:2.30.30.240 13 105 2.0E-22 T 23-10-2018 DLM_0537 273047a0a16840237bb69999b7235de4 135 Pfam PF05239 PRC-barrel domain 26 100 1.3E-15 T 23-10-2018 IPR027275 PRC-barrel domain DLM_0537 273047a0a16840237bb69999b7235de4 135 SUPERFAMILY SSF50346 21 133 8.83E-21 T 23-10-2018 IPR011033 PRC-barrel-like superfamily DLM_4238 64863d19381441f098585f6d88070581 419 Gene3D G3DSA:3.40.309.10 227 376 2.5E-167 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_4238 64863d19381441f098585f6d88070581 419 PIRSF PIRSF000151 1 419 4.5E-180 T 23-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DLM_4238 64863d19381441f098585f6d88070581 419 Pfam PF00171 Aldehyde dehydrogenase family 312 375 8.9E-8 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_4238 64863d19381441f098585f6d88070581 419 Pfam PF00171 Aldehyde dehydrogenase family 8 282 1.3E-17 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_4238 64863d19381441f098585f6d88070581 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 418 41.933 T 23-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DLM_4238 64863d19381441f098585f6d88070581 419 SUPERFAMILY SSF53720 6 418 4.32E-122 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_4238 64863d19381441f098585f6d88070581 419 Gene3D G3DSA:3.40.605.10 14 415 2.5E-167 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_4238 64863d19381441f098585f6d88070581 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 23-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DLM_4238 64863d19381441f098585f6d88070581 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 408 2.9E-150 T 23-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DLM_0404 74d0c009b163bbda947cd376f18bd4dc 194 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 194 7.1E-58 T 23-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 DLM_0404 74d0c009b163bbda947cd376f18bd4dc 194 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 194 2.6E-59 T 23-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 DLM_0404 74d0c009b163bbda947cd376f18bd4dc 194 Gene3D G3DSA:3.30.70.2540 1 194 8.6E-60 T 23-10-2018 DLM_1027 c4e965acf8691279ee7d997b0b0c34db 526 SUPERFAMILY SSF56059 145 385 6.48E-22 T 23-10-2018 DLM_1027 c4e965acf8691279ee7d997b0b0c34db 526 Gene3D G3DSA:3.30.470.130 99 447 2.5E-17 T 23-10-2018 DLM_4241 763923a7dea5c498888274b522aba2f5 399 SMART SM00331 164 398 7.5E-10 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_4241 763923a7dea5c498888274b522aba2f5 399 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 188 396 1.6E-24 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_4241 763923a7dea5c498888274b522aba2f5 399 Gene3D G3DSA:3.10.580.10 5 107 4.8E-5 T 23-10-2018 DLM_4241 763923a7dea5c498888274b522aba2f5 399 SUPERFAMILY SSF54631 2 92 1.18E-5 T 23-10-2018 DLM_4241 763923a7dea5c498888274b522aba2f5 399 Gene3D G3DSA:3.60.40.10 127 398 3.0E-57 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_4241 763923a7dea5c498888274b522aba2f5 399 SUPERFAMILY SSF81606 174 394 3.66E-5 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Gene3D G3DSA:1.10.8.60 787 882 1.5E-8 T 23-10-2018 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 788 859 8.8E-10 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Gene3D G3DSA:1.10.1780.10 1 158 2.6E-35 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 72 5.6E-6 T 23-10-2018 IPR004176 Clp, N-terminal DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Gene3D G3DSA:3.40.50.300 562 786 6.2E-69 T 23-10-2018 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Gene3D G3DSA:3.40.50.300 179 374 3.2E-64 T 23-10-2018 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 SUPERFAMILY SSF52540 558 850 2.07E-61 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 SUPERFAMILY SSF81923 10 126 9.42E-19 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 871 0.0 T 23-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 SUPERFAMILY SSF52540 191 555 3.25E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 1.1E-32 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 1.1E-32 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 1.1E-32 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 1.1E-32 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 235 347 5.9E-11 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 SMART SM00382 609 766 2.1E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 SMART SM00382 230 375 4.0E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Pfam PF07724 AAA domain (Cdc48 subfamily) 608 782 1.1E-40 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 Gene3D G3DSA:3.40.50.300 376 556 5.4E-43 T 23-10-2018 DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 SMART SM01086 787 879 2.2E-7 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_1578 0831c4c8ff881d8cbc24e7e26d510c2c 882 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 326 338 - T 23-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 Gene3D G3DSA:3.30.572.10 2 268 6.6E-137 T 23-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 6 89 7.5E-44 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 88 268 8.8E-100 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 PRINTS PR00108 Thymidylate synthase family signature 145 160 3.9E-51 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 PRINTS PR00108 Thymidylate synthase family signature 163 189 3.9E-51 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 PRINTS PR00108 Thymidylate synthase family signature 46 67 3.9E-51 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 PRINTS PR00108 Thymidylate synthase family signature 201 218 3.9E-51 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 PRINTS PR00108 Thymidylate synthase family signature 119 138 3.9E-51 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 SUPERFAMILY SSF55831 4 268 1.57E-135 T 23-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 Hamap MF_00008 Thymidylate synthase [thyA]. 5 268 41.86 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 ProSitePatterns PS00091 Thymidylate synthase active site. 130 158 - T 23-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0327 dd73f454f1fc5ddc63311fa9a6545d71 268 Pfam PF00303 Thymidylate synthase 6 268 1.2E-129 T 23-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DLM_0202 9e00a18e67c57b568bbd61835df4e6b6 472 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 8 459 2.0E-184 T 23-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DLM_0202 9e00a18e67c57b568bbd61835df4e6b6 472 Pfam PF03841 L-seryl-tRNA selenium transferase 84 452 4.3E-170 T 23-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DLM_0202 9e00a18e67c57b568bbd61835df4e6b6 472 Gene3D G3DSA:3.90.1150.110 10 454 2.8E-157 T 23-10-2018 DLM_0202 9e00a18e67c57b568bbd61835df4e6b6 472 Gene3D G3DSA:3.40.640.10 96 360 2.8E-157 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0202 9e00a18e67c57b568bbd61835df4e6b6 472 Pfam PF12390 Selenocysteine synthase N terminal 7 46 5.3E-9 T 23-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DLM_0202 9e00a18e67c57b568bbd61835df4e6b6 472 SUPERFAMILY SSF53383 78 359 9.64E-46 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0202 9e00a18e67c57b568bbd61835df4e6b6 472 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 468 236.876 T 23-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 SUPERFAMILY SSF64288 85 261 1.73E-41 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 71 2.8E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 71 87 2.8E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 Pfam PF07702 UTRA domain 119 256 3.9E-37 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 Gene3D G3DSA:3.40.1410.10 104 263 8.4E-37 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 SMART SM00866 118 257 6.3E-30 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 SMART SM00345 38 97 7.9E-14 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 SUPERFAMILY SSF46785 25 101 7.26E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 Gene3D G3DSA:1.10.10.10 21 100 1.4E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0284 f1aab4a4c3c17cc936666e9e20c1ffbd 266 Pfam PF00392 Bacterial regulatory proteins, gntR family 36 97 5.6E-15 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1168 8a5999bff0bf6bd2ec93f3e11b03475f 366 Pfam PF12706 Beta-lactamase superfamily domain 122 324 1.5E-39 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_1168 8a5999bff0bf6bd2ec93f3e11b03475f 366 Gene3D G3DSA:3.60.15.10 83 366 5.0E-80 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_1168 8a5999bff0bf6bd2ec93f3e11b03475f 366 SUPERFAMILY SSF56281 106 354 7.74E-32 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 SUPERFAMILY SSF48008 110 244 1.78E-21 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 Gene3D G3DSA:1.20.120.530 105 246 3.8E-25 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 2.4E-21 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 SMART SM00895 109 239 7.6E-14 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 4.6E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 4.6E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 Gene3D G3DSA:1.10.10.10 11 84 3.6E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 SUPERFAMILY SSF46785 14 84 3.63E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 SMART SM00345 21 80 1.8E-20 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1510 f5d6ed57d89d8121171b5993d83feeaa 247 Pfam PF07729 FCD domain 111 238 2.8E-20 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1820 277843161242732a4277ffdc3404eddb 361 Gene3D G3DSA:3.40.640.10 17 256 1.1E-92 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1820 277843161242732a4277ffdc3404eddb 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 359 1.0E-161 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DLM_1820 277843161242732a4277ffdc3404eddb 361 Pfam PF00266 Aminotransferase class-V 4 349 1.0E-56 T 23-10-2018 IPR000192 Aminotransferase class V domain DLM_1820 277843161242732a4277ffdc3404eddb 361 PIRSF PIRSF000525 1 361 1.6E-156 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DLM_1820 277843161242732a4277ffdc3404eddb 361 Gene3D G3DSA:3.90.1150.10 258 361 6.5E-40 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1820 277843161242732a4277ffdc3404eddb 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 52.118 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DLM_1820 277843161242732a4277ffdc3404eddb 361 SUPERFAMILY SSF53383 2 358 4.35E-119 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3925 98250b1706ace946cc2404a2f49f559e 374 Pfam PF03600 Citrate transporter 27 313 4.8E-18 T 23-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DLM_1145 98717cff3eec3e2b7c94794928c38bc1 598 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1145 98717cff3eec3e2b7c94794928c38bc1 598 Pfam PF00664 ABC transporter transmembrane region 34 306 5.4E-36 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DLM_1145 98717cff3eec3e2b7c94794928c38bc1 598 Gene3D G3DSA:1.20.1560.10 25 340 4.0E-114 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_1145 98717cff3eec3e2b7c94794928c38bc1 598 SUPERFAMILY SSF52540 345 587 1.22E-92 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1145 98717cff3eec3e2b7c94794928c38bc1 598 Pfam PF00005 ABC transporter 368 517 9.2E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1145 98717cff3eec3e2b7c94794928c38bc1 598 SUPERFAMILY SSF90123 20 331 3.53E-58 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_1145 98717cff3eec3e2b7c94794928c38bc1 598 Gene3D G3DSA:3.40.50.300 342 596 2.1E-94 T 23-10-2018 DLM_1145 98717cff3eec3e2b7c94794928c38bc1 598 SMART SM00382 377 563 1.1E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0910 2cc7761fb3584557a670861a57621ec5 249 PIRSF PIRSF000090 1 249 9.5E-85 T 23-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DLM_0910 2cc7761fb3584557a670861a57621ec5 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 23-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DLM_0910 2cc7761fb3584557a670861a57621ec5 249 SMART SM00893 23 211 1.8E-63 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_0910 2cc7761fb3584557a670861a57621ec5 249 Gene3D G3DSA:3.40.50.620 1 247 2.1E-84 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0910 2cc7761fb3584557a670861a57621ec5 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 7.6E-46 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_0910 2cc7761fb3584557a670861a57621ec5 249 SUPERFAMILY SSF52402 2 242 3.14E-83 T 23-10-2018 DLM_1690 a9cf7dcb73fbd41ef60f19bc9a3d6efd 491 Pfam PF00361 Proton-conducting membrane transporter 101 321 2.0E-33 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1690 a9cf7dcb73fbd41ef60f19bc9a3d6efd 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 50 75 1.2E-16 T 23-10-2018 DLM_1690 a9cf7dcb73fbd41ef60f19bc9a3d6efd 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 280 292 1.2E-16 T 23-10-2018 DLM_1690 a9cf7dcb73fbd41ef60f19bc9a3d6efd 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 213 239 1.2E-16 T 23-10-2018 DLM_1690 a9cf7dcb73fbd41ef60f19bc9a3d6efd 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 125 146 1.2E-16 T 23-10-2018 DLM_1690 a9cf7dcb73fbd41ef60f19bc9a3d6efd 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 191 212 1.2E-16 T 23-10-2018 DLM_1972 bd602b8f6ca40cbe5737f3a369bb74c1 249 SUPERFAMILY SSF64005 14 232 3.01E-85 T 23-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DLM_1972 bd602b8f6ca40cbe5737f3a369bb74c1 249 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 236 1.8E-79 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DLM_1972 bd602b8f6ca40cbe5737f3a369bb74c1 249 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 237 40.797 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DLM_1972 bd602b8f6ca40cbe5737f3a369bb74c1 249 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 236 3.3E-85 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DLM_1972 bd602b8f6ca40cbe5737f3a369bb74c1 249 Gene3D G3DSA:3.40.1180.10 4 237 3.2E-90 T 23-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DLM_1972 bd602b8f6ca40cbe5737f3a369bb74c1 249 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 182 199 - T 23-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 SUPERFAMILY SSF53383 13 399 2.29E-126 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 Gene3D G3DSA:3.90.1150.10 23 390 2.0E-151 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 401 1.2E-213 T 23-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 Pfam PF00202 Aminotransferase class-III 18 396 2.3E-125 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 Gene3D G3DSA:3.40.640.10 57 302 2.0E-151 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 14 397 7.2E-154 T 23-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 PIRSF PIRSF000521 164 400 8.1E-38 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 PIRSF PIRSF000521 25 155 5.8E-5 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2566 cfe47a2d1b921a631f18eaa12aafdd24 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 70.214 T 23-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DLM_0619 d5681f04d0caabef810a607d579e69ee 296 Gene3D G3DSA:2.60.120.10 35 105 1.4E-8 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_0619 d5681f04d0caabef810a607d579e69ee 296 Pfam PF02311 AraC-like ligand binding domain 31 165 8.4E-16 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DLM_0619 d5681f04d0caabef810a607d579e69ee 296 SUPERFAMILY SSF46689 246 294 1.39E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0619 d5681f04d0caabef810a607d579e69ee 296 SMART SM00342 208 291 3.2E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0619 d5681f04d0caabef810a607d579e69ee 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 2.5E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0619 d5681f04d0caabef810a607d579e69ee 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 2.5E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0619 d5681f04d0caabef810a607d579e69ee 296 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 9 293 2.9E-116 T 23-10-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA DLM_0619 d5681f04d0caabef810a607d579e69ee 296 Pfam PF12833 Helix-turn-helix domain 216 293 6.5E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0619 d5681f04d0caabef810a607d579e69ee 296 SUPERFAMILY SSF51182 42 110 1.16E-10 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_0619 d5681f04d0caabef810a607d579e69ee 296 Gene3D G3DSA:1.10.10.60 189 295 1.8E-22 T 23-10-2018 DLM_3079 7f89fafbf59f99fdb171596d94ed8d4a 150 Gene3D G3DSA:3.40.250.10 20 150 2.7E-33 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_3079 7f89fafbf59f99fdb171596d94ed8d4a 150 SUPERFAMILY SSF52821 21 149 5.76E-22 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_3079 7f89fafbf59f99fdb171596d94ed8d4a 150 Pfam PF00581 Rhodanese-like domain 32 126 3.1E-9 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_3079 7f89fafbf59f99fdb171596d94ed8d4a 150 SMART SM00450 27 133 3.1E-13 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_3954 00c511a9bf363145c4f01f56bfa60098 404 Pfam PF11871 Domain of unknown function (DUF3391) 2 129 1.6E-34 T 23-10-2018 IPR021812 Protein of unknown function DUF3391 DLM_3954 00c511a9bf363145c4f01f56bfa60098 404 SMART SM00471 158 294 5.0E-8 T 23-10-2018 IPR003607 HD/PDEase domain DLM_3954 00c511a9bf363145c4f01f56bfa60098 404 TIGRFAM TIGR00277 HDIG: HDIG domain 161 253 9.8E-8 T 23-10-2018 IPR006675 HDIG domain DLM_3954 00c511a9bf363145c4f01f56bfa60098 404 Pfam PF13487 HD domain 213 275 3.4E-15 T 23-10-2018 DLM_3954 00c511a9bf363145c4f01f56bfa60098 404 Gene3D G3DSA:1.10.3210.10 5 326 9.2E-77 T 23-10-2018 DLM_3954 00c511a9bf363145c4f01f56bfa60098 404 SUPERFAMILY SSF109604 154 324 1.26E-34 T 23-10-2018 DLM_1127 9d1649639858cb475f9c0791a1a0836b 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1127 9d1649639858cb475f9c0791a1a0836b 459 Gene3D G3DSA:3.40.640.10 68 342 3.8E-172 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1127 9d1649639858cb475f9c0791a1a0836b 459 SUPERFAMILY SSF53383 8 446 2.02E-121 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_1127 9d1649639858cb475f9c0791a1a0836b 459 Gene3D G3DSA:3.90.1150.10 14 445 3.8E-172 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1127 9d1649639858cb475f9c0791a1a0836b 459 PIRSF PIRSF000521 11 146 2.4E-7 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1127 9d1649639858cb475f9c0791a1a0836b 459 PIRSF PIRSF000521 151 449 1.9E-23 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1127 9d1649639858cb475f9c0791a1a0836b 459 Pfam PF00202 Aminotransferase class-III 34 445 7.1E-90 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_4197 4984af43c078d93905fb6bde7296add3 464 SUPERFAMILY SSF51984 6 92 2.09E-28 T 23-10-2018 DLM_4197 4984af43c078d93905fb6bde7296add3 464 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 455 6.9E-170 T 23-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4197 4984af43c078d93905fb6bde7296add3 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 403 8.7E-19 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DLM_4197 4984af43c078d93905fb6bde7296add3 464 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 464 42.85 T 23-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4197 4984af43c078d93905fb6bde7296add3 464 SUPERFAMILY SSF53244 311 459 4.58E-45 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4197 4984af43c078d93905fb6bde7296add3 464 Gene3D G3DSA:3.40.50.720 6 92 1.2E-30 T 23-10-2018 DLM_4197 4984af43c078d93905fb6bde7296add3 464 SUPERFAMILY SSF53623 91 309 2.22E-72 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_4197 4984af43c078d93905fb6bde7296add3 464 Pfam PF08245 Mur ligase middle domain 110 291 8.0E-29 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DLM_4197 4984af43c078d93905fb6bde7296add3 464 Gene3D G3DSA:3.90.190.20 310 463 1.2E-44 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4197 4984af43c078d93905fb6bde7296add3 464 Pfam PF01225 Mur ligase family, catalytic domain 7 105 2.3E-25 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DLM_4197 4984af43c078d93905fb6bde7296add3 464 Gene3D G3DSA:3.40.1190.10 94 309 1.3E-80 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_1541 95fe80a98d842b6873d1aa9f94edb65c 383 SUPERFAMILY SSF51679 3 350 8.9E-100 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_1541 95fe80a98d842b6873d1aa9f94edb65c 383 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 2.9E-183 T 23-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DLM_1541 95fe80a98d842b6873d1aa9f94edb65c 383 Gene3D G3DSA:3.20.20.30 1 354 2.2E-144 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_1541 95fe80a98d842b6873d1aa9f94edb65c 383 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 3 376 74.752 T 23-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DLM_1541 95fe80a98d842b6873d1aa9f94edb65c 383 Pfam PF00296 Luciferase-like monooxygenase 4 326 2.1E-91 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DLM_1072 0fe6bd3aa9baf0d6f476dadc3c34e79d 379 Pfam PF01734 Patatin-like phospholipase 9 221 6.5E-24 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DLM_1072 0fe6bd3aa9baf0d6f476dadc3c34e79d 379 Gene3D G3DSA:3.40.1090.10 129 257 2.2E-7 T 23-10-2018 DLM_1072 0fe6bd3aa9baf0d6f476dadc3c34e79d 379 Gene3D G3DSA:3.40.1090.10 2 106 2.4E-19 T 23-10-2018 DLM_1072 0fe6bd3aa9baf0d6f476dadc3c34e79d 379 SUPERFAMILY SSF52151 6 270 2.88E-48 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DLM_0764 d0b36697e27682035e02e4fb6435ab27 104 Gene3D G3DSA:1.10.260.40 1 56 4.0E-5 T 23-10-2018 DLM_0764 d0b36697e27682035e02e4fb6435ab27 104 SUPERFAMILY SSF47413 4 54 8.04E-5 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_0216 259b861e324393d1e9ab3f57b7965e21 209 Pfam PF01292 Prokaryotic cytochrome b561 9 184 2.7E-22 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DLM_0216 259b861e324393d1e9ab3f57b7965e21 209 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 202 5.0E-64 T 23-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 DLM_0216 259b861e324393d1e9ab3f57b7965e21 209 Gene3D G3DSA:1.20.950.20 1 209 4.2E-70 T 23-10-2018 DLM_0216 259b861e324393d1e9ab3f57b7965e21 209 SUPERFAMILY SSF81342 4 207 1.33E-53 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DLM_3087 544389fec4565d29c2e39586c861752d 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 71 2.9E-8 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_3087 544389fec4565d29c2e39586c861752d 154 SMART SM00855 2 106 1.8E-5 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_3087 544389fec4565d29c2e39586c861752d 154 Gene3D G3DSA:3.40.50.1240 1 153 1.1E-28 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_3087 544389fec4565d29c2e39586c861752d 154 SUPERFAMILY SSF53254 3 134 1.83E-21 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_3858 a78aa6e7be37624fd842f6ad6461324c 621 SUPERFAMILY SSF52540 352 600 1.81E-88 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3858 a78aa6e7be37624fd842f6ad6461324c 621 Pfam PF00005 ABC transporter 377 530 2.0E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3858 a78aa6e7be37624fd842f6ad6461324c 621 Gene3D G3DSA:3.40.50.300 350 603 1.6E-92 T 23-10-2018 DLM_3858 a78aa6e7be37624fd842f6ad6461324c 621 Gene3D G3DSA:1.20.1560.10 7 349 2.9E-23 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_3858 a78aa6e7be37624fd842f6ad6461324c 621 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3858 a78aa6e7be37624fd842f6ad6461324c 621 SMART SM00382 385 576 2.1E-20 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3858 a78aa6e7be37624fd842f6ad6461324c 621 Pfam PF00664 ABC transporter transmembrane region 42 298 3.6E-11 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DLM_3858 a78aa6e7be37624fd842f6ad6461324c 621 SUPERFAMILY SSF90123 28 341 2.62E-43 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_1449 89c4257a5ed5f89f2ea68077950d75a4 242 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 128.071 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DLM_1449 89c4257a5ed5f89f2ea68077950d75a4 242 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 237 6.7E-97 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DLM_1449 89c4257a5ed5f89f2ea68077950d75a4 242 SUPERFAMILY SSF63892 1 240 7.32E-98 T 23-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DLM_1449 89c4257a5ed5f89f2ea68077950d75a4 242 Gene3D G3DSA:3.20.20.70 1 242 1.8E-104 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1449 89c4257a5ed5f89f2ea68077950d75a4 242 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 236 2.2E-101 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 15 494 3.0E-83 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 SUPERFAMILY SSF55486 5 495 1.95E-118 T 23-10-2018 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 Gene3D G3DSA:1.10.1370.30 3 496 2.9E-195 T 23-10-2018 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 PIRSF PIRSF006615 2 496 9.5E-188 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 244 263 8.4E-41 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 446 464 8.4E-41 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 401 422 8.4E-41 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 331 350 8.4E-41 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 168 8.4E-41 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 264 283 8.4E-41 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0464 7ceb9b6069d2159dbe5202af604de0f1 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 291 307 8.4E-41 T 23-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DLM_0158 c717cd86b9fe5dbad213ddb3154ee812 80 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 1 78 4.9E-35 T 23-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 DLM_0158 c717cd86b9fe5dbad213ddb3154ee812 80 PRINTS PR00160 Glutaredoxin signature 56 69 6.6E-9 T 23-10-2018 IPR014025 Glutaredoxin subgroup DLM_0158 c717cd86b9fe5dbad213ddb3154ee812 80 PRINTS PR00160 Glutaredoxin signature 42 55 6.6E-9 T 23-10-2018 IPR014025 Glutaredoxin subgroup DLM_0158 c717cd86b9fe5dbad213ddb3154ee812 80 SUPERFAMILY SSF52833 1 79 6.46E-27 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_0158 c717cd86b9fe5dbad213ddb3154ee812 80 Gene3D G3DSA:3.40.30.10 1 80 1.3E-25 T 23-10-2018 DLM_0158 c717cd86b9fe5dbad213ddb3154ee812 80 ProSitePatterns PS00195 Glutaredoxin active site. 1 17 - T 23-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DLM_0158 c717cd86b9fe5dbad213ddb3154ee812 80 Pfam PF00462 Glutaredoxin 1 59 9.9E-20 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DLM_0714 bf00c1a287ede2c1d7c9fbb9070fec36 185 Pfam PF00293 NUDIX domain 42 152 4.8E-16 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_0714 bf00c1a287ede2c1d7c9fbb9070fec36 185 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_0714 bf00c1a287ede2c1d7c9fbb9070fec36 185 Gene3D G3DSA:3.90.79.10 2 180 1.2E-54 T 23-10-2018 DLM_0714 bf00c1a287ede2c1d7c9fbb9070fec36 185 SUPERFAMILY SSF55811 7 176 2.03E-51 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_0010 72417788e12d9551e83d603e8501cc2c 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 3.0E-48 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DLM_0010 72417788e12d9551e83d603e8501cc2c 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 284 1.4E-31 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DLM_0010 72417788e12d9551e83d603e8501cc2c 288 SUPERFAMILY SSF51735 1 162 6.34E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0010 72417788e12d9551e83d603e8501cc2c 288 PIRSF PIRSF000103 1 288 1.7E-70 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DLM_0010 72417788e12d9551e83d603e8501cc2c 288 Gene3D G3DSA:1.10.1040.10 162 288 2.5E-35 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DLM_0010 72417788e12d9551e83d603e8501cc2c 288 Gene3D G3DSA:3.40.50.720 1 161 1.8E-53 T 23-10-2018 DLM_0010 72417788e12d9551e83d603e8501cc2c 288 SUPERFAMILY SSF48179 162 286 2.38E-34 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 Gene3D G3DSA:3.40.190.10 100 294 1.8E-33 T 23-10-2018 DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.2E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 Gene3D G3DSA:1.10.10.10 6 93 3.9E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 SUPERFAMILY SSF53850 91 303 3.62E-25 T 23-10-2018 DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 Pfam PF03466 LysR substrate binding domain 89 298 3.8E-22 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.6E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.6E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.6E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 SUPERFAMILY SSF46785 8 86 9.33E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4071 84696ab014d1ddcc79ca5fce3ee1ab70 311 Gene3D G3DSA:3.40.190.10 163 269 1.8E-33 T 23-10-2018 DLM_1697 2655f460da46d98f6e3ecc6f3b1c508b 458 Gene3D G3DSA:2.20.200.10 97 346 3.7E-129 T 23-10-2018 DLM_1697 2655f460da46d98f6e3ecc6f3b1c508b 458 Pfam PF02321 Outer membrane efflux protein 60 247 4.7E-13 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1697 2655f460da46d98f6e3ecc6f3b1c508b 458 Pfam PF02321 Outer membrane efflux protein 274 455 1.3E-30 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1697 2655f460da46d98f6e3ecc6f3b1c508b 458 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 457 4.8E-112 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_1697 2655f460da46d98f6e3ecc6f3b1c508b 458 Gene3D G3DSA:1.20.1600.10 51 457 3.7E-129 T 23-10-2018 DLM_1697 2655f460da46d98f6e3ecc6f3b1c508b 458 SUPERFAMILY SSF56954 2 457 9.02E-104 T 23-10-2018 DLM_4211 177335a42eb0c0635c16467854da6b82 76 Pfam PF01206 Sulfurtransferase TusA 7 75 2.8E-21 T 23-10-2018 IPR001455 TusA-like domain DLM_4211 177335a42eb0c0635c16467854da6b82 76 SUPERFAMILY SSF64307 2 75 3.4E-22 T 23-10-2018 IPR036868 TusA-like domain superfamily DLM_4211 177335a42eb0c0635c16467854da6b82 76 Gene3D G3DSA:3.30.110.40 1 76 5.2E-28 T 23-10-2018 IPR036868 TusA-like domain superfamily DLM_4211 177335a42eb0c0635c16467854da6b82 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 23-10-2018 IPR001455 TusA-like domain DLM_3942 39f41401856177304d4f11b6b976a279 303 SUPERFAMILY SSF103481 72 149 8.89E-9 T 23-10-2018 DLM_3942 39f41401856177304d4f11b6b976a279 303 SUPERFAMILY SSF103481 188 291 1.57E-10 T 23-10-2018 DLM_3942 39f41401856177304d4f11b6b976a279 303 TIGRFAM TIGR00688 rarD: protein RarD 12 264 3.3E-70 T 23-10-2018 IPR004626 RarD protein GO:0005887 DLM_3942 39f41401856177304d4f11b6b976a279 303 Pfam PF00892 EamA-like transporter family 12 148 5.6E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3942 39f41401856177304d4f11b6b976a279 303 Pfam PF00892 EamA-like transporter family 156 287 5.2E-9 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3358 dfcd653387c0393661316c014a500f8c 318 Gene3D G3DSA:3.40.50.2300 1 312 9.9E-104 T 23-10-2018 DLM_3358 dfcd653387c0393661316c014a500f8c 318 Pfam PF13407 Periplasmic binding protein domain 1 256 4.3E-23 T 23-10-2018 IPR025997 Periplasmic binding protein DLM_3358 dfcd653387c0393661316c014a500f8c 318 Gene3D G3DSA:3.40.50.2300 97 236 9.9E-104 T 23-10-2018 DLM_3358 dfcd653387c0393661316c014a500f8c 318 SUPERFAMILY SSF53822 1 270 1.03E-34 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_0297 584873a703550e7da4628de3505889f0 298 Gene3D G3DSA:3.40.190.290 93 291 6.8E-43 T 23-10-2018 DLM_0297 584873a703550e7da4628de3505889f0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.7E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0297 584873a703550e7da4628de3505889f0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.7E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0297 584873a703550e7da4628de3505889f0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.7E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0297 584873a703550e7da4628de3505889f0 298 SUPERFAMILY SSF53850 93 290 4.01E-41 T 23-10-2018 DLM_0297 584873a703550e7da4628de3505889f0 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.3E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0297 584873a703550e7da4628de3505889f0 298 Pfam PF03466 LysR substrate binding domain 92 290 1.3E-41 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0297 584873a703550e7da4628de3505889f0 298 SUPERFAMILY SSF46785 4 88 1.33E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0297 584873a703550e7da4628de3505889f0 298 Gene3D G3DSA:1.10.10.10 3 90 7.7E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0239 6d56e971b891abcf3fe8afc49b837e73 451 Pfam PF02601 Exonuclease VII, large subunit 127 436 1.9E-103 T 23-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DLM_0239 6d56e971b891abcf3fe8afc49b837e73 451 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 353 1.8E-134 T 23-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DLM_0239 6d56e971b891abcf3fe8afc49b837e73 451 Pfam PF13742 OB-fold nucleic acid binding domain 11 103 5.9E-28 T 23-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DLM_0239 6d56e971b891abcf3fe8afc49b837e73 451 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 440 29.515 T 23-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DLM_3379 d5696a87f33e4c7272b9fb083fa5fbc5 341 Gene3D G3DSA:3.20.20.70 2 268 2.9E-95 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3379 d5696a87f33e4c7272b9fb083fa5fbc5 341 SUPERFAMILY SSF51569 4 293 8.58E-90 T 23-10-2018 DLM_3379 d5696a87f33e4c7272b9fb083fa5fbc5 341 SMART SM00858 283 341 6.3E-11 T 23-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DLM_3379 d5696a87f33e4c7272b9fb083fa5fbc5 341 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 9 335 1.6E-153 T 23-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 DLM_3379 d5696a87f33e4c7272b9fb083fa5fbc5 341 Pfam PF03102 NeuB family 30 268 1.2E-97 T 23-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 DLM_3379 d5696a87f33e4c7272b9fb083fa5fbc5 341 Pfam PF08666 SAF domain 285 340 1.4E-12 T 23-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DLM_3379 d5696a87f33e4c7272b9fb083fa5fbc5 341 SUPERFAMILY SSF51269 278 341 1.01E-18 T 23-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 DLM_3379 d5696a87f33e4c7272b9fb083fa5fbc5 341 Gene3D G3DSA:3.90.1210.10 284 341 2.4E-22 T 23-10-2018 DLM_4030 136a11849af81341901bae6eccb254a1 343 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 42 99 2.5E-21 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4030 136a11849af81341901bae6eccb254a1 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 2.6E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4030 136a11849af81341901bae6eccb254a1 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 67 77 2.6E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4030 136a11849af81341901bae6eccb254a1 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 77 88 2.6E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4030 136a11849af81341901bae6eccb254a1 343 SUPERFAMILY SSF53850 126 330 7.91E-33 T 23-10-2018 DLM_4030 136a11849af81341901bae6eccb254a1 343 Gene3D G3DSA:3.40.190.10 136 323 2.7E-40 T 23-10-2018 DLM_4030 136a11849af81341901bae6eccb254a1 343 SUPERFAMILY SSF46785 38 113 6.81E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4030 136a11849af81341901bae6eccb254a1 343 Gene3D G3DSA:1.10.10.10 40 129 6.1E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4030 136a11849af81341901bae6eccb254a1 343 Gene3D G3DSA:3.40.190.10 196 296 2.7E-40 T 23-10-2018 DLM_4030 136a11849af81341901bae6eccb254a1 343 Pfam PF03466 LysR substrate binding domain 123 326 1.7E-29 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 183 4.4E-83 T 23-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 SUPERFAMILY SSF52317 2 183 8.25E-56 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 Gene3D G3DSA:3.40.50.880 1 184 2.4E-61 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 PRINTS PR00096 Glutamine amidotransferase superfamily signature 44 53 2.1E-13 T 23-10-2018 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 PRINTS PR00096 Glutamine amidotransferase superfamily signature 161 174 2.1E-13 T 23-10-2018 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 PRINTS PR00096 Glutamine amidotransferase superfamily signature 71 82 2.1E-13 T 23-10-2018 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 PRINTS PR00097 Anthranilate synthase component II signature 44 53 4.4E-27 T 23-10-2018 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 PRINTS PR00097 Anthranilate synthase component II signature 71 82 4.4E-27 T 23-10-2018 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 PRINTS PR00097 Anthranilate synthase component II signature 161 174 4.4E-27 T 23-10-2018 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 PRINTS PR00097 Anthranilate synthase component II signature 96 104 4.4E-27 T 23-10-2018 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 PRINTS PR00097 Anthranilate synthase component II signature 116 128 4.4E-27 T 23-10-2018 DLM_1864 ed6d9811e3be14090d6d9590ebbbd78f 186 Pfam PF00117 Glutamine amidotransferase class-I 1 183 1.8E-56 T 23-10-2018 IPR017926 Glutamine amidotransferase DLM_4193 6bf04d8baf63af1dfbd02ed2e3740be3 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 23.979 T 23-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4193 6bf04d8baf63af1dfbd02ed2e3740be3 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4193 6bf04d8baf63af1dfbd02ed2e3740be3 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 23-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4193 6bf04d8baf63af1dfbd02ed2e3740be3 361 Pfam PF00953 Glycosyl transferase family 4 99 285 4.9E-36 T 23-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DLM_4193 6bf04d8baf63af1dfbd02ed2e3740be3 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 1.7E-127 T 23-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_1001 219a81fc7598a41e51296dd8fedcbcfd 428 Gene3D G3DSA:1.20.1250.20 227 424 5.3E-16 T 23-10-2018 DLM_1001 219a81fc7598a41e51296dd8fedcbcfd 428 Pfam PF07690 Major Facilitator Superfamily 30 377 1.2E-18 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1001 219a81fc7598a41e51296dd8fedcbcfd 428 SUPERFAMILY SSF103473 13 419 3.27E-36 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1001 219a81fc7598a41e51296dd8fedcbcfd 428 Gene3D G3DSA:1.20.1250.20 14 213 1.4E-15 T 23-10-2018 DLM_0702 72e78e0180e99c6c4af98302e2050bb0 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 465 540 7.7E-17 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DLM_0702 72e78e0180e99c6c4af98302e2050bb0 562 Gene3D G3DSA:3.40.50.12780 17 452 7.1E-122 T 23-10-2018 DLM_0702 72e78e0180e99c6c4af98302e2050bb0 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 23-10-2018 IPR020845 AMP-binding, conserved site DLM_0702 72e78e0180e99c6c4af98302e2050bb0 562 Gene3D G3DSA:3.30.300.310 453 556 5.1E-32 T 23-10-2018 DLM_0702 72e78e0180e99c6c4af98302e2050bb0 562 Pfam PF00501 AMP-binding enzyme 24 456 2.1E-110 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_0702 72e78e0180e99c6c4af98302e2050bb0 562 SUPERFAMILY SSF56801 15 551 1.44E-159 T 23-10-2018 DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 SUPERFAMILY SSF50715 1 182 4.88E-51 T 23-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 94 22.166 T 23-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 Pfam PF01386 Ribosomal L25p family 7 91 1.1E-22 T 23-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 94 1.0E-27 T 23-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 Gene3D G3DSA:2.40.240.10 1 94 3.3E-29 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 171 1.9E-40 T 23-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 181 3.9E-25 T 23-10-2018 IPR020057 Ribosomal protein L25, beta domain DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 Gene3D G3DSA:2.170.120.20 97 185 5.4E-23 T 23-10-2018 IPR037121 Ribosomal protein L25, C-terminal DLM_3409 00b44b1fb69eef6e9a1f5aad2a4bed5c 186 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 185 29.417 T 23-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DLM_2655 cd88ad1976a6f883da0817e86936f534 323 SUPERFAMILY SSF52540 1 238 5.33E-74 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2655 cd88ad1976a6f883da0817e86936f534 323 SMART SM00382 26 209 8.8E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2655 cd88ad1976a6f883da0817e86936f534 323 Gene3D G3DSA:3.40.50.300 1 235 6.0E-71 T 23-10-2018 DLM_2655 cd88ad1976a6f883da0817e86936f534 323 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2655 cd88ad1976a6f883da0817e86936f534 323 Pfam PF00005 ABC transporter 18 159 9.4E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1481 0a8c6598a1fbf281cee8f8049cea5910 303 Gene3D G3DSA:1.10.10.10 2 89 4.8E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1481 0a8c6598a1fbf281cee8f8049cea5910 303 SUPERFAMILY SSF46785 4 112 1.18E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1481 0a8c6598a1fbf281cee8f8049cea5910 303 Gene3D G3DSA:3.40.190.290 92 293 4.5E-49 T 23-10-2018 DLM_1481 0a8c6598a1fbf281cee8f8049cea5910 303 Pfam PF03466 LysR substrate binding domain 89 291 2.0E-33 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1481 0a8c6598a1fbf281cee8f8049cea5910 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.5E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1481 0a8c6598a1fbf281cee8f8049cea5910 303 SUPERFAMILY SSF53850 90 295 3.62E-37 T 23-10-2018 DLM_1456 5d8b9e5f8ddc5ab3f4d945533ff3178d 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 249 278 3.3E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1456 5d8b9e5f8ddc5ab3f4d945533ff3178d 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 326 353 3.3E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1456 5d8b9e5f8ddc5ab3f4d945533ff3178d 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 355 384 3.3E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1456 5d8b9e5f8ddc5ab3f4d945533ff3178d 491 SMART SM00283 228 489 4.9E-51 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1456 5d8b9e5f8ddc5ab3f4d945533ff3178d 491 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 274 453 1.3E-41 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1456 5d8b9e5f8ddc5ab3f4d945533ff3178d 491 SUPERFAMILY SSF58104 207 486 6.8E-58 T 23-10-2018 DLM_1456 5d8b9e5f8ddc5ab3f4d945533ff3178d 491 Gene3D G3DSA:1.10.287.950 190 489 7.5E-57 T 23-10-2018 DLM_4544 0350b43bcc91fcd97abee129150494f1 190 Gene3D G3DSA:2.40.128.110 23 189 4.1E-50 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DLM_4544 0350b43bcc91fcd97abee129150494f1 190 SMART SM00867 24 187 5.4E-59 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DLM_4544 0350b43bcc91fcd97abee129150494f1 190 SUPERFAMILY SSF101874 24 189 2.09E-53 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DLM_4544 0350b43bcc91fcd97abee129150494f1 190 Pfam PF04264 YceI-like domain 25 186 1.0E-41 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 296 27.962 T 23-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 SUPERFAMILY SSF82866 73 293 3.14E-36 T 23-10-2018 DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 Pfam PF07549 SecD/SecF GG Motif 32 59 1.2E-10 T 23-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 114 282 1.3E-50 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 285 5.4E-71 T 23-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 Gene3D G3DSA:1.20.1640.10 97 302 1.5E-10 T 23-10-2018 DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 Pfam PF02355 Protein export membrane protein 109 293 1.7E-60 T 23-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.2E-28 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 1.2E-28 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 1.2E-28 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DLM_2411 5fee3cc14e74116a7bfc6f8a1830e00e 311 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 1.2E-28 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DLM_3922 d885f570ac26698987f4cf3ed96acf9f 297 SUPERFAMILY SSF103481 218 295 5.36E-11 T 23-10-2018 DLM_3922 d885f570ac26698987f4cf3ed96acf9f 297 Pfam PF00892 EamA-like transporter family 18 147 2.6E-16 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3922 d885f570ac26698987f4cf3ed96acf9f 297 Pfam PF00892 EamA-like transporter family 159 288 4.6E-11 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3922 d885f570ac26698987f4cf3ed96acf9f 297 SUPERFAMILY SSF103481 51 150 3.27E-13 T 23-10-2018 DLM_0382 12907d768a18a3331c29db6c1cf85e11 475 SUPERFAMILY SSF81442 5 464 3.01E-126 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0382 12907d768a18a3331c29db6c1cf85e11 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 200 255 - T 23-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0382 12907d768a18a3331c29db6c1cf85e11 475 Gene3D G3DSA:1.20.210.10 1 470 7.1E-205 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0382 12907d768a18a3331c29db6c1cf85e11 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 6 471 9.9E-243 T 23-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DLM_0382 12907d768a18a3331c29db6c1cf85e11 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 10 440 8.1E-115 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2888 f25450a52b9565efc272029f59790818 923 Pfam PF13188 PAS domain 401 450 0.0066 T 23-10-2018 IPR000014 PAS domain DLM_2888 f25450a52b9565efc272029f59790818 923 Pfam PF13188 PAS domain 264 312 0.028 T 23-10-2018 IPR000014 PAS domain DLM_2888 f25450a52b9565efc272029f59790818 923 Gene3D G3DSA:3.30.450.20 397 517 2.9E-42 T 23-10-2018 DLM_2888 f25450a52b9565efc272029f59790818 923 Gene3D G3DSA:3.30.450.20 259 379 3.3E-37 T 23-10-2018 DLM_2888 f25450a52b9565efc272029f59790818 923 SMART SM00283 614 861 2.3E-91 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2888 f25450a52b9565efc272029f59790818 923 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 176 3.2E-15 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_2888 f25450a52b9565efc272029f59790818 923 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 674 827 3.1E-55 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2888 f25450a52b9565efc272029f59790818 923 SUPERFAMILY SSF58104 581 864 1.44E-72 T 23-10-2018 DLM_2888 f25450a52b9565efc272029f59790818 923 Gene3D G3DSA:1.10.287.950 562 863 2.9E-86 T 23-10-2018 DLM_2888 f25450a52b9565efc272029f59790818 923 SMART SM00091 263 328 2.1 T 23-10-2018 IPR000014 PAS domain DLM_2888 f25450a52b9565efc272029f59790818 923 SMART SM00091 401 470 1.0 T 23-10-2018 IPR000014 PAS domain DLM_2888 f25450a52b9565efc272029f59790818 923 SUPERFAMILY SSF55785 388 508 5.58E-7 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 613 721 4.3E-21 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 667 4.5E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 681 4.5E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 700 4.5E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 706 719 4.5E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 Pfam PF00512 His Kinase A (phospho-acceptor) domain 501 567 1.5E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 Pfam PF13426 PAS domain 362 467 4.6E-11 T 23-10-2018 IPR000014 PAS domain DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 Gene3D G3DSA:3.30.450.20 348 488 5.9E-16 T 23-10-2018 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 Gene3D G3DSA:1.10.287.130 505 567 6.9E-20 T 23-10-2018 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 SMART SM00387 612 722 7.6E-33 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 SMART SM00388 500 570 3.7E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 SUPERFAMILY SSF55874 557 720 1.01E-38 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 SMART SM01079 71 265 7.6E-22 T 23-10-2018 IPR006189 CHASE domain DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 SUPERFAMILY SSF47384 496 564 2.55E-8 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 SMART SM00091 351 420 7.9E-8 T 23-10-2018 IPR000014 PAS domain DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 Gene3D G3DSA:3.30.450.350 76 270 1.8E-10 T 23-10-2018 DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 SUPERFAMILY SSF55785 340 466 1.92E-16 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 Pfam PF03924 CHASE domain 82 258 6.1E-23 T 23-10-2018 IPR006189 CHASE domain DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 Gene3D G3DSA:3.30.565.10 570 727 2.2E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0855 e4baf9a21b1ddef511a1f50f66911f0d 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 357 468 7.5E-9 T 23-10-2018 IPR000014 PAS domain DLM_1852 e887dc89cd93169d262c8a7e2f09de15 452 SUPERFAMILY SSF53383 45 449 1.32E-85 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_1852 e887dc89cd93169d262c8a7e2f09de15 452 Gene3D G3DSA:3.90.1150.10 26 442 1.8E-123 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1852 e887dc89cd93169d262c8a7e2f09de15 452 Pfam PF00202 Aminotransferase class-III 51 448 1.4E-46 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1852 e887dc89cd93169d262c8a7e2f09de15 452 Gene3D G3DSA:3.40.640.10 93 346 1.8E-123 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2476 5be3ec682bcd153b7309253a49f8ef3b 405 Gene3D G3DSA:3.40.720.10 49 404 5.7E-33 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DLM_2476 5be3ec682bcd153b7309253a49f8ef3b 405 SUPERFAMILY SSF53649 54 400 1.45E-40 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DLM_2476 5be3ec682bcd153b7309253a49f8ef3b 405 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 57 372 1.1E-21 T 23-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 DLM_0563 c60fd45afc75ec7b968f4e13a2400881 497 Gene3D G3DSA:3.40.605.10 23 458 1.9E-154 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0563 c60fd45afc75ec7b968f4e13a2400881 497 Gene3D G3DSA:3.40.309.10 249 450 1.9E-154 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0563 c60fd45afc75ec7b968f4e13a2400881 497 Pfam PF00171 Aldehyde dehydrogenase family 21 477 1.6E-144 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0563 c60fd45afc75ec7b968f4e13a2400881 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_0563 c60fd45afc75ec7b968f4e13a2400881 497 SUPERFAMILY SSF53720 2 481 3.01E-151 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0563 c60fd45afc75ec7b968f4e13a2400881 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 2.2E-220 T 23-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DLM_3651 8328bb4f35e34acf4c5de5e1c3d37f46 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 167 3.4E-16 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DLM_3651 8328bb4f35e34acf4c5de5e1c3d37f46 175 Gene3D G3DSA:1.10.1740.10 6 81 1.0E-6 T 23-10-2018 DLM_3651 8328bb4f35e34acf4c5de5e1c3d37f46 175 SUPERFAMILY SSF88659 95 167 3.71E-12 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_3651 8328bb4f35e34acf4c5de5e1c3d37f46 175 Pfam PF08281 Sigma-70, region 4 115 167 4.7E-14 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_3651 8328bb4f35e34acf4c5de5e1c3d37f46 175 Gene3D G3DSA:1.10.10.10 94 172 4.1E-10 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3651 8328bb4f35e34acf4c5de5e1c3d37f46 175 Pfam PF04542 Sigma-70 region 2 18 84 1.5E-8 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DLM_3651 8328bb4f35e34acf4c5de5e1c3d37f46 175 SUPERFAMILY SSF88946 13 103 2.47E-10 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 240 262 - T 23-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 Pfam PF01817 Chorismate mutase type II 10 85 1.9E-23 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 TIGRFAM TIGR01807 CM_P2: chorismate mutase 6 77 4.2E-31 T 23-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 Gene3D G3DSA:3.30.70.260 269 356 2.8E-29 T 23-10-2018 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 PIRSF PIRSF001500 1 357 9.1E-140 T 23-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 Gene3D G3DSA:1.20.59.10 6 87 1.5E-27 T 23-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 302 309 - T 23-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 Pfam PF00800 Prephenate dehydratase 89 266 2.0E-59 T 23-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 Gene3D G3DSA:3.40.190.10 169 254 5.2E-57 T 23-10-2018 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 Gene3D G3DSA:3.40.190.10 91 262 5.2E-57 T 23-10-2018 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 SMART SM00830 10 87 1.6E-30 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 SUPERFAMILY SSF48600 6 90 1.83E-19 T 23-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 SUPERFAMILY SSF53850 88 272 2.17E-58 T 23-10-2018 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 SUPERFAMILY SSF55021 259 354 1.42E-26 T 23-10-2018 DLM_1816 017cd6a55c7da755ac6bf727f041dbdb 357 Pfam PF01842 ACT domain 275 338 2.1E-10 T 23-10-2018 IPR002912 ACT domain DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 4.1E-53 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 SUPERFAMILY SSF75615 114 205 7.06E-25 T 23-10-2018 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Gene3D G3DSA:3.30.160.110 113 148 6.7E-16 T 23-10-2018 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Gene3D G3DSA:3.40.50.720 1 112 8.9E-35 T 23-10-2018 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 4.4E-72 T 23-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 450 3.0E-94 T 23-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Gene3D G3DSA:3.40.1010.10 215 331 2.6E-46 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Gene3D G3DSA:1.10.8.210 150 211 1.4E-8 T 23-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 SUPERFAMILY SSF51735 1 111 8.66E-26 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 PIRSF PIRSF036426 1 467 2.4E-204 T 23-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 460 52.623 T 23-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Gene3D G3DSA:3.30.950.10 332 471 7.7E-51 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Pfam PF10414 Sirohaem synthase dimerisation region 151 207 1.1E-19 T 23-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 SUPERFAMILY SSF53790 212 458 2.36E-83 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Pfam PF13241 Putative NAD(P)-binding 6 115 2.7E-27 T 23-10-2018 DLM_3546 0c1ae307eec6d2eb62ed97fee72ae218 473 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 5.0E-6 T 23-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_1421 8d8ffc097c28d6da19750b89751da154 277 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 6 270 3.3E-66 T 23-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 DLM_1421 8d8ffc097c28d6da19750b89751da154 277 SUPERFAMILY SSF51197 3 277 1.24E-94 T 23-10-2018 DLM_1421 8d8ffc097c28d6da19750b89751da154 277 Gene3D G3DSA:3.60.130.10 1 277 1.6E-96 T 23-10-2018 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 697 2.1E-18 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 SUPERFAMILY SSF55186 553 711 1.96E-51 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Gene3D G3DSA:3.30.54.20 625 678 2.2E-50 T 23-10-2018 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.7E-32 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 4.7E-32 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.7E-32 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 4.7E-32 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 4.7E-32 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Pfam PF01411 tRNA synthetases class II (A) 5 555 1.3E-222 T 23-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 877 199.898 T 23-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 856 0.0 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Gene3D G3DSA:3.10.310.40 765 875 6.4E-32 T 23-10-2018 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Gene3D G3DSA:3.30.930.10 1 250 2.3E-122 T 23-10-2018 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 SUPERFAMILY SSF101353 254 443 8.11E-61 T 23-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Pfam PF02272 DHHA1 domain 733 872 5.9E-28 T 23-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 SUPERFAMILY SSF50447 452 553 2.72E-18 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Gene3D G3DSA:2.40.30.130 456 553 2.3E-10 T 23-10-2018 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 SMART SM00863 654 697 2.3E-22 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 SUPERFAMILY SSF55681 2 253 3.73E-106 T 23-10-2018 DLM_2595 0b511a317e4f64f85485bfb1cc9661c1 877 Gene3D G3DSA:3.30.980.10 563 698 2.2E-50 T 23-10-2018 DLM_3333 5ec5b535f0f7bddb6f24630d6ee19329 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 3.6E-102 T 23-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DLM_3333 5ec5b535f0f7bddb6f24630d6ee19329 236 Pfam PF01048 Phosphorylase superfamily 17 236 1.6E-38 T 23-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DLM_3333 5ec5b535f0f7bddb6f24630d6ee19329 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 48.881 T 23-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DLM_3333 5ec5b535f0f7bddb6f24630d6ee19329 236 SUPERFAMILY SSF53167 3 233 4.45E-85 T 23-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DLM_3333 5ec5b535f0f7bddb6f24630d6ee19329 236 Gene3D G3DSA:3.40.50.1580 1 236 1.0E-69 T 23-10-2018 DLM_0616 5c54b47412a9415acb8feb59fd234b9e 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_0616 5c54b47412a9415acb8feb59fd234b9e 486 Gene3D G3DSA:3.40.605.10 17 472 6.0E-180 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0616 5c54b47412a9415acb8feb59fd234b9e 486 Gene3D G3DSA:3.40.309.10 247 443 6.0E-180 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0616 5c54b47412a9415acb8feb59fd234b9e 486 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 2 485 5.4E-225 T 23-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 DLM_0616 5c54b47412a9415acb8feb59fd234b9e 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_0616 5c54b47412a9415acb8feb59fd234b9e 486 Pfam PF00171 Aldehyde dehydrogenase family 12 472 1.7E-173 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0616 5c54b47412a9415acb8feb59fd234b9e 486 SUPERFAMILY SSF53720 2 478 2.09E-170 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0600 9c4efb30484cd652735b592e2ccf3882 409 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 69 85 6.7E-6 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_0600 9c4efb30484cd652735b592e2ccf3882 409 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 6.7E-6 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_0600 9c4efb30484cd652735b592e2ccf3882 409 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 301 314 6.7E-6 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_0600 9c4efb30484cd652735b592e2ccf3882 409 Pfam PF13458 Periplasmic binding protein 46 388 4.1E-60 T 23-10-2018 IPR028081 Leucine-binding protein domain DLM_0600 9c4efb30484cd652735b592e2ccf3882 409 Gene3D G3DSA:3.40.50.2300 48 362 9.0E-101 T 23-10-2018 DLM_0600 9c4efb30484cd652735b592e2ccf3882 409 Gene3D G3DSA:3.40.50.2300 167 295 9.0E-101 T 23-10-2018 DLM_0600 9c4efb30484cd652735b592e2ccf3882 409 SUPERFAMILY SSF53822 45 391 4.86E-95 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_2816 69c493d7f19e305d6079303fd6eda964 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 19 37 - T 23-10-2018 DLM_2816 69c493d7f19e305d6079303fd6eda964 344 Gene3D G3DSA:3.40.50.2300 76 330 6.8E-76 T 23-10-2018 DLM_2816 69c493d7f19e305d6079303fd6eda964 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 62 2.3E-15 T 23-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DLM_2816 69c493d7f19e305d6079303fd6eda964 344 Gene3D G3DSA:1.10.260.40 10 73 5.1E-20 T 23-10-2018 DLM_2816 69c493d7f19e305d6079303fd6eda964 344 SUPERFAMILY SSF47413 16 73 3.94E-15 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_2816 69c493d7f19e305d6079303fd6eda964 344 SUPERFAMILY SSF53822 73 332 9.42E-67 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_2816 69c493d7f19e305d6079303fd6eda964 344 Pfam PF13377 Periplasmic binding protein-like domain 181 338 2.2E-35 T 23-10-2018 DLM_2816 69c493d7f19e305d6079303fd6eda964 344 Gene3D G3DSA:3.40.50.2300 173 335 6.8E-76 T 23-10-2018 DLM_2816 69c493d7f19e305d6079303fd6eda964 344 SMART SM00354 16 85 6.6E-30 T 23-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Gene3D G3DSA:3.40.50.2300 669 795 1.3E-42 T 23-10-2018 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Pfam PF00989 PAS fold 149 262 1.4E-11 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Gene3D G3DSA:1.10.287.130 261 348 1.9E-29 T 23-10-2018 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SUPERFAMILY SSF52172 531 643 6.15E-5 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SUPERFAMILY SSF55874 339 513 1.31E-47 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Pfam PF08448 PAS fold 34 142 3.3E-9 T 23-10-2018 IPR013656 PAS fold-4 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SMART SM00387 397 513 6.0E-43 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 512 1.0E-29 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 2.3E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 2.3E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 2.3E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 2.3E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Gene3D G3DSA:3.30.450.20 28 139 9.4E-12 T 23-10-2018 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Pfam PF00072 Response regulator receiver domain 677 791 3.7E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SMART SM00448 674 791 1.1E-35 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SUPERFAMILY SSF55785 34 143 1.8E-12 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SUPERFAMILY SSF47384 271 351 1.45E-21 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SMART SM00388 285 350 1.3E-23 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Gene3D G3DSA:1.20.120.160 815 922 1.3E-15 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Gene3D G3DSA:3.30.565.10 351 516 1.8E-51 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SUPERFAMILY SSF55785 142 263 4.49E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Gene3D G3DSA:3.30.450.20 140 260 7.3E-22 T 23-10-2018 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Gene3D G3DSA:3.40.50.2300 521 646 8.0E-6 T 23-10-2018 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 349 1.8E-19 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 271 9.5E-17 T 23-10-2018 IPR000014 PAS domain DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 39 145 1.9E-9 T 23-10-2018 IPR000014 PAS domain DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SUPERFAMILY SSF52172 674 798 1.71E-37 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SMART SM00091 28 94 4.1E-7 T 23-10-2018 IPR000014 PAS domain DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SMART SM00091 146 212 5.4E-8 T 23-10-2018 IPR000014 PAS domain DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 Pfam PF01627 Hpt domain 834 914 5.4E-7 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2712 eed414705ebe61dd5b93f26bbfcc8174 923 SUPERFAMILY SSF47226 774 913 3.01E-17 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_4013 1b0a53ce0cd1c5b4afdfac08e5fad669 136 Pfam PF09335 SNARE associated Golgi protein 26 129 6.9E-8 T 23-10-2018 IPR032816 SNARE associated Golgi protein DLM_2794 9e817af29cb9b096ffa7efff5e517177 408 PIRSF PIRSF015557 27 408 3.2E-163 T 23-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 DLM_2794 9e817af29cb9b096ffa7efff5e517177 408 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 32 404 7.4E-156 T 23-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 DLM_2794 9e817af29cb9b096ffa7efff5e517177 408 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 32 403 6.1E-156 T 23-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 DLM_0547 1362c4d36d944f266449678a868a737d 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 358 1.5E-72 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_0547 1362c4d36d944f266449678a868a737d 375 Gene3D G3DSA:2.40.50.100 66 194 1.4E-73 T 23-10-2018 DLM_0547 1362c4d36d944f266449678a868a737d 375 Gene3D G3DSA:2.40.420.20 278 356 1.4E-73 T 23-10-2018 DLM_0547 1362c4d36d944f266449678a868a737d 375 Gene3D G3DSA:1.10.287.470 101 160 1.4E-73 T 23-10-2018 DLM_0547 1362c4d36d944f266449678a868a737d 375 Gene3D G3DSA:2.40.30.170 55 277 1.4E-73 T 23-10-2018 DLM_0547 1362c4d36d944f266449678a868a737d 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 267 6.1E-31 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_0547 1362c4d36d944f266449678a868a737d 375 SUPERFAMILY SSF111369 57 274 1.12E-45 T 23-10-2018 DLM_2386 bb835d84d6ce004c192c516ab742c4e5 262 Gene3D G3DSA:3.40.190.10 29 253 1.6E-28 T 23-10-2018 DLM_2386 bb835d84d6ce004c192c516ab742c4e5 262 SUPERFAMILY SSF53850 27 257 5.83E-40 T 23-10-2018 DLM_2386 bb835d84d6ce004c192c516ab742c4e5 262 Gene3D G3DSA:3.40.190.10 110 217 1.6E-28 T 23-10-2018 DLM_2386 bb835d84d6ce004c192c516ab742c4e5 262 Pfam PF13531 Bacterial extracellular solute-binding protein 28 254 1.7E-35 T 23-10-2018 DLM_3050 c8e5b313ceacb402b1d124744ac64306 256 SUPERFAMILY SSF46785 38 103 4.6E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3050 c8e5b313ceacb402b1d124744ac64306 256 Gene3D G3DSA:1.20.120.530 102 243 9.8E-27 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_3050 c8e5b313ceacb402b1d124744ac64306 256 SMART SM00345 41 99 3.2E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3050 c8e5b313ceacb402b1d124744ac64306 256 Gene3D G3DSA:1.10.10.10 31 100 1.4E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3050 c8e5b313ceacb402b1d124744ac64306 256 SUPERFAMILY SSF48008 105 238 1.54E-27 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_3050 c8e5b313ceacb402b1d124744ac64306 256 Pfam PF07729 FCD domain 109 232 2.9E-21 T 23-10-2018 IPR011711 GntR, C-terminal DLM_3050 c8e5b313ceacb402b1d124744ac64306 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 39 99 8.1E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3050 c8e5b313ceacb402b1d124744ac64306 256 SMART SM00895 109 233 6.0E-16 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1876 c79887fba1f2ab8eefdf246bf13a6e3f 144 SUPERFAMILY SSF53927 10 138 2.34E-40 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DLM_1876 c79887fba1f2ab8eefdf246bf13a6e3f 144 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 110 1.6E-15 T 23-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DLM_1876 c79887fba1f2ab8eefdf246bf13a6e3f 144 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 13 138 5.6E-36 T 23-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 DLM_1876 c79887fba1f2ab8eefdf246bf13a6e3f 144 Gene3D G3DSA:3.40.140.10 2 141 2.2E-43 T 23-10-2018 DLM_1876 c79887fba1f2ab8eefdf246bf13a6e3f 144 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 102 - T 23-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DLM_1126 dfdf18624f87c6725106d01f0e816736 449 SMART SM01230 112 368 2.4E-108 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1126 dfdf18624f87c6725106d01f0e816736 449 Pfam PF00120 Glutamine synthetase, catalytic domain 113 443 7.6E-104 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1126 dfdf18624f87c6725106d01f0e816736 449 SUPERFAMILY SSF55931 113 446 7.46E-108 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DLM_1126 dfdf18624f87c6725106d01f0e816736 449 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 248 263 - T 23-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DLM_1126 dfdf18624f87c6725106d01f0e816736 449 SUPERFAMILY SSF54368 7 109 5.23E-21 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1126 dfdf18624f87c6725106d01f0e816736 449 Gene3D G3DSA:3.10.20.70 4 113 7.3E-6 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1126 dfdf18624f87c6725106d01f0e816736 449 Gene3D G3DSA:3.30.590.10 115 447 3.4E-100 T 23-10-2018 DLM_0633 d81ec723220138f5453fa9d2d5cfbc54 577 SUPERFAMILY SSF53850 28 576 1.81E-113 T 23-10-2018 DLM_0633 d81ec723220138f5453fa9d2d5cfbc54 577 Gene3D G3DSA:3.10.105.10 292 550 1.2E-224 T 23-10-2018 DLM_0633 d81ec723220138f5453fa9d2d5cfbc54 577 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 481 9.7E-78 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain DLM_0633 d81ec723220138f5453fa9d2d5cfbc54 577 Gene3D G3DSA:3.40.190.10 12 574 1.2E-224 T 23-10-2018 DLM_0633 d81ec723220138f5453fa9d2d5cfbc54 577 PIRSF PIRSF002741 6 575 5.5E-94 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 SUPERFAMILY SSF56235 21 437 8.49E-137 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 Gene3D G3DSA:3.60.20.10 21 551 0.0 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 Pfam PF01645 Conserved region in glutamate synthase 799 1163 2.5E-151 T 23-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 Pfam PF01493 GXGXG motif 1243 1427 3.7E-76 T 23-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 Pfam PF00310 Glutamine amidotransferases class-II 21 434 1.1E-155 T 23-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 Pfam PF04898 Glutamate synthase central domain 463 743 9.4E-104 T 23-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 SUPERFAMILY SSF69336 1220 1473 6.54E-86 T 23-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 Gene3D G3DSA:3.20.20.70 439 798 0.0 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 Gene3D G3DSA:2.160.20.60 1216 1481 9.8E-100 T 23-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 Gene3D G3DSA:3.20.20.70 489 1176 0.0 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3387 cb5fcef5c8934e6de06899e2fad2f1ee 1482 SUPERFAMILY SSF51395 454 1195 1.1E-252 T 23-10-2018 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 Gene3D G3DSA:1.10.579.10 198 378 1.4E-76 T 23-10-2018 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 249 268 - T 23-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 PRINTS PR00147 DNA photolyase signature 249 267 9.2E-31 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 PRINTS PR00147 DNA photolyase signature 229 245 9.2E-31 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 PRINTS PR00147 DNA photolyase signature 56 72 9.2E-31 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 PRINTS PR00147 DNA photolyase signature 288 302 9.2E-31 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 SUPERFAMILY SSF52425 2 92 1.31E-20 T 23-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 Gene3D G3DSA:3.40.50.620 1 43 1.5E-5 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 Pfam PF00875 DNA photolyase 2 76 1.6E-20 T 23-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 229 241 - T 23-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 SUPERFAMILY SSF48173 113 375 1.13E-101 T 23-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DLM_0079 98f498c9b44dcefe4d0223c91673cf87 378 Pfam PF03441 FAD binding domain of DNA photolyase 180 375 2.6E-84 T 23-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 36 299 4.5E-99 T 23-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 SUPERFAMILY SSF46626 61 213 5.53E-35 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 PIRSF PIRSF000006 5 301 4.1E-107 T 23-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 Gene3D G3DSA:1.10.760.10 108 297 2.7E-82 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 Gene3D G3DSA:1.20.58.1490 5 99 2.2E-31 T 23-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 134 206 2.2E-15 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 218 294 1.2E-12 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 PRINTS PR00605 Class IC cytochrome C signature 142 153 1.5E-6 T 23-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 PRINTS PR00605 Class IC cytochrome C signature 184 206 1.5E-6 T 23-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 SUPERFAMILY SSF46626 215 300 2.96E-26 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 Gene3D G3DSA:1.10.760.10 187 274 2.7E-82 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0379 7b0990f10155209886e4afcd8cbc2215 304 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 89 7.1E-23 T 23-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 SUPERFAMILY SSF140990 409 607 3.01E-78 T 23-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 SMART SM00382 191 330 3.7E-25 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 Pfam PF06480 FtsH Extracellular 9 100 1.7E-10 T 23-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 195 327 1.2E-45 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 Gene3D G3DSA:1.10.8.60 330 406 2.5E-28 T 23-10-2018 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 Gene3D G3DSA:1.20.58.760 409 605 5.8E-76 T 23-10-2018 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 Gene3D G3DSA:3.40.50.300 143 329 6.0E-70 T 23-10-2018 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 ProSitePatterns PS00674 AAA-protein family signature. 298 316 - T 23-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 Gene3D G3DSA:2.40.50.920 28 108 6.6E-12 T 23-10-2018 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 619 37.422 T 23-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 106 598 7.8E-241 T 23-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 Pfam PF01434 Peptidase family M41 389 597 3.7E-82 T 23-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DLM_0102 e1762aa9275d6b76fdaeec4d38db8c58 636 SUPERFAMILY SSF52540 154 398 1.91E-71 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4248 ec87ddf8b6d5490cff7d4f0a91b08f8a 292 Gene3D G3DSA:1.10.3720.10 13 272 1.3E-65 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4248 ec87ddf8b6d5490cff7d4f0a91b08f8a 292 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 11 270 1.9E-124 T 23-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 DLM_4248 ec87ddf8b6d5490cff7d4f0a91b08f8a 292 SUPERFAMILY SSF161098 9 261 1.96E-55 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4248 ec87ddf8b6d5490cff7d4f0a91b08f8a 292 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 12 268 2.7E-101 T 23-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DLM_4248 ec87ddf8b6d5490cff7d4f0a91b08f8a 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 265 1.0E-14 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3913 51d3ce5d0dca26cb47d328427e0dff7d 221 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 11 213 3.9E-92 T 23-10-2018 IPR008517 Protein of unknown function DUF799 DLM_3913 51d3ce5d0dca26cb47d328427e0dff7d 221 Gene3D G3DSA:3.40.50.10610 27 194 2.2E-66 T 23-10-2018 DLM_3101 c886b0f25ca787390d1c436482878c8d 209 Pfam PF00551 Formyl transferase 2 179 2.5E-55 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_3101 c886b0f25ca787390d1c436482878c8d 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 188 1.2E-68 T 23-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DLM_3101 c886b0f25ca787390d1c436482878c8d 209 Gene3D G3DSA:3.40.50.170 1 200 1.5E-75 T 23-10-2018 DLM_3101 c886b0f25ca787390d1c436482878c8d 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 23-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_3101 c886b0f25ca787390d1c436482878c8d 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 185 31.756 T 23-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DLM_3101 c886b0f25ca787390d1c436482878c8d 209 SUPERFAMILY SSF53328 2 193 7.06E-63 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_1817 121c47af1654fc0d58c412ab24881f72 195 SUPERFAMILY SSF53335 29 194 1.51E-32 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1817 121c47af1654fc0d58c412ab24881f72 195 Gene3D G3DSA:3.40.50.150 8 195 5.7E-45 T 23-10-2018 DLM_1817 121c47af1654fc0d58c412ab24881f72 195 Pfam PF01596 O-methyltransferase 23 161 4.6E-26 T 23-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 Gene3D G3DSA:3.30.410.40 148 467 8.1E-168 T 23-10-2018 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 79 102 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 SUPERFAMILY SSF54373 288 470 4.12E-46 T 23-10-2018 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 Gene3D G3DSA:3.50.50.60 3 524 8.1E-168 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 Pfam PF05199 GMC oxidoreductase 383 520 2.6E-38 T 23-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 SUPERFAMILY SSF51905 2 526 2.02E-88 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 Pfam PF00732 GMC oxidoreductase 4 293 2.0E-86 T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 Gene3D G3DSA:4.10.450.10 36 193 8.1E-168 T 23-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 Gene3D G3DSA:1.10.1220.110 94 147 8.1E-168 T 23-10-2018 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 PIRSF PIRSF000137 1 527 1.6E-139 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_3391 4c09e647fbcfe0f0e23ef13e1e155bea 527 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 252 266 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_0770 0b30a0d5738160bc76cbea05b6958d2a 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-8 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0770 0b30a0d5738160bc76cbea05b6958d2a 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-8 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0770 0b30a0d5738160bc76cbea05b6958d2a 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-8 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0770 0b30a0d5738160bc76cbea05b6958d2a 91 SMART SM00411 1 90 4.8E-31 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0770 0b30a0d5738160bc76cbea05b6958d2a 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 5.4E-29 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0770 0b30a0d5738160bc76cbea05b6958d2a 91 Gene3D G3DSA:4.10.520.10 1 90 4.7E-30 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_0770 0b30a0d5738160bc76cbea05b6958d2a 91 SUPERFAMILY SSF47729 1 89 7.36E-27 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_1118 dc6a4fed80fa89d3f3a8ac349e649970 455 Pfam PF00120 Glutamine synthetase, catalytic domain 117 451 2.8E-99 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1118 dc6a4fed80fa89d3f3a8ac349e649970 455 Gene3D G3DSA:3.30.590.10 115 455 6.7E-107 T 23-10-2018 DLM_1118 dc6a4fed80fa89d3f3a8ac349e649970 455 SUPERFAMILY SSF55931 116 453 1.47E-103 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DLM_1118 dc6a4fed80fa89d3f3a8ac349e649970 455 SMART SM01230 115 370 2.1E-88 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_4555 2c5efdd17078db906a7696eda52bbbc6 353 Gene3D G3DSA:3.90.25.10 188 351 1.6E-55 T 23-10-2018 DLM_4555 2c5efdd17078db906a7696eda52bbbc6 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 320 1.2E-34 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_4555 2c5efdd17078db906a7696eda52bbbc6 353 SUPERFAMILY SSF51735 2 331 9.7E-59 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4555 2c5efdd17078db906a7696eda52bbbc6 353 Gene3D G3DSA:3.40.50.720 1 186 1.1E-44 T 23-10-2018 DLM_4555 2c5efdd17078db906a7696eda52bbbc6 353 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 5 348 2.6E-138 T 23-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 Gene3D G3DSA:1.10.40.30 408 459 2.0E-17 T 23-10-2018 DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 Pfam PF00206 Lyase 13 342 2.0E-100 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 463 1.3E-216 T 23-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 Pfam PF10415 Fumarase C C-terminus 408 460 1.3E-19 T 23-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 SUPERFAMILY SSF48557 3 459 1.73E-150 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.9E-29 T 23-10-2018 IPR000362 Fumarate lyase family DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 3.9E-29 T 23-10-2018 IPR000362 Fumarate lyase family DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.9E-29 T 23-10-2018 IPR000362 Fumarate lyase family DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.9E-29 T 23-10-2018 IPR000362 Fumarate lyase family DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 Gene3D G3DSA:1.10.275.10 1 139 9.5E-60 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal DLM_4464 75e2f38d2fb6657b473d396ef399567d 466 Gene3D G3DSA:1.20.200.10 140 407 1.2E-111 T 23-10-2018 DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 PIRSF PIRSF005900 1 154 1.0E-45 T 23-10-2018 IPR002177 DNA-binding protein Dps DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 ProSitePatterns PS00818 Dps protein family signature 1. 35 51 - T 23-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 Pfam PF00210 Ferritin-like domain 17 154 6.2E-28 T 23-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 SUPERFAMILY SSF47240 3 154 2.03E-48 T 23-10-2018 IPR009078 Ferritin-like superfamily DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 ProSitePatterns PS00819 Dps protein family signature 2. 61 75 - T 23-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 Gene3D G3DSA:1.20.1260.10 1 154 3.6E-59 T 23-10-2018 IPR012347 Ferritin-like DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 130 148 3.2E-11 T 23-10-2018 IPR002177 DNA-binding protein Dps DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 3.2E-11 T 23-10-2018 IPR002177 DNA-binding protein Dps DLM_4323 d3ff63a250227e48092ba41229a39fb6 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 35 51 3.2E-11 T 23-10-2018 IPR002177 DNA-binding protein Dps DLM_3829 f530effcde108bb300ade0e11c07ad7d 186 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 6.2E-85 T 23-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DLM_3829 f530effcde108bb300ade0e11c07ad7d 186 PIRSF PIRSF039093 1 180 4.1E-86 T 23-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DLM_3829 f530effcde108bb300ade0e11c07ad7d 186 Gene3D G3DSA:3.60.20.10 2 178 1.1E-66 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_3829 f530effcde108bb300ade0e11c07ad7d 186 SUPERFAMILY SSF56235 3 177 6.92E-58 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_3829 f530effcde108bb300ade0e11c07ad7d 186 Pfam PF00227 Proteasome subunit 6 174 2.5E-21 T 23-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DLM_3829 f530effcde108bb300ade0e11c07ad7d 186 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 41.131 T 23-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DLM_3453 1c81d4808d10095768cb48585e3c76d0 313 Gene3D G3DSA:3.60.21.10 11 248 1.1E-19 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like DLM_3453 1c81d4808d10095768cb48585e3c76d0 313 SUPERFAMILY SSF56300 10 236 3.19E-33 T 23-10-2018 DLM_3453 1c81d4808d10095768cb48585e3c76d0 313 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 15 229 7.3E-13 T 23-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 Gene3D G3DSA:3.30.1490.300 64 122 8.5E-76 T 23-10-2018 DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 SUPERFAMILY SSF53067 166 329 3.46E-21 T 23-10-2018 DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 SUPERFAMILY SSF53067 23 150 1.97E-11 T 23-10-2018 DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 1 331 5.1E-93 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 Gene3D G3DSA:3.30.420.40 161 295 8.5E-76 T 23-10-2018 DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 Pfam PF11104 Type IV pilus assembly protein PilM; 1 331 3.1E-121 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 Gene3D G3DSA:3.30.420.40 1 329 8.5E-76 T 23-10-2018 DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 SMART SM00842 1 154 0.0067 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DLM_3529 f52ad9c61ba723278505b79a1bd7e902 332 PIRSF PIRSF019169 1 332 7.0E-114 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM DLM_2587 41e15becd99cb07fe2e45eb1d80070cb 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 113 3.7E-15 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DLM_2587 41e15becd99cb07fe2e45eb1d80070cb 134 SUPERFAMILY SSF51316 2 133 4.18E-41 T 23-10-2018 IPR011057 Mss4-like superfamily DLM_2587 41e15becd99cb07fe2e45eb1d80070cb 134 Gene3D G3DSA:2.170.150.70 5 113 3.3E-11 T 23-10-2018 DLM_1646 846e66973a76ffdf1b3e0362f8c61e5f 270 Pfam PF00196 Bacterial regulatory proteins, luxR family 202 253 6.4E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1646 846e66973a76ffdf1b3e0362f8c61e5f 270 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 217 9.8E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1646 846e66973a76ffdf1b3e0362f8c61e5f 270 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 233 245 9.8E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1646 846e66973a76ffdf1b3e0362f8c61e5f 270 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 233 9.8E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1646 846e66973a76ffdf1b3e0362f8c61e5f 270 SMART SM00421 200 257 4.3E-18 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1646 846e66973a76ffdf1b3e0362f8c61e5f 270 SUPERFAMILY SSF46894 191 257 3.16E-17 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_1646 846e66973a76ffdf1b3e0362f8c61e5f 270 Gene3D G3DSA:1.10.10.10 177 259 8.5E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3168 2380fecd23b2c8ee64b591a5f189799e 333 SUPERFAMILY SSF52540 4 197 6.42E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3168 2380fecd23b2c8ee64b591a5f189799e 333 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 216 322 1.7E-4 T 23-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3168 2380fecd23b2c8ee64b591a5f189799e 333 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 15 206 4.7E-66 T 23-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3168 2380fecd23b2c8ee64b591a5f189799e 333 Pfam PF13177 DNA polymerase III, delta subunit 15 177 2.7E-44 T 23-10-2018 DLM_3168 2380fecd23b2c8ee64b591a5f189799e 333 Gene3D G3DSA:3.40.50.300 1 177 2.6E-54 T 23-10-2018 DLM_2720 4818ef6593b51bc56fd6928b3e0e3675 233 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 144 223 1.9E-33 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DLM_2720 4818ef6593b51bc56fd6928b3e0e3675 233 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 72 223 38.118 T 23-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DLM_2720 4818ef6593b51bc56fd6928b3e0e3675 233 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 143 222 7.5E-35 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DLM_2720 4818ef6593b51bc56fd6928b3e0e3675 233 Gene3D G3DSA:3.30.160.70 69 138 2.7E-9 T 23-10-2018 DLM_2720 4818ef6593b51bc56fd6928b3e0e3675 233 Gene3D G3DSA:1.10.10.10 142 227 8.8E-36 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2720 4818ef6593b51bc56fd6928b3e0e3675 233 SUPERFAMILY SSF46767 142 223 4.05E-32 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DLM_2720 4818ef6593b51bc56fd6928b3e0e3675 233 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 193 199 - T 23-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DLM_2720 4818ef6593b51bc56fd6928b3e0e3675 233 SUPERFAMILY SSF53155 101 148 4.32E-8 T 23-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DLM_2196 11c0a673ac864882b6b7cbd4c6634d83 138 Pfam PF00717 Peptidase S24-like 63 116 8.9E-6 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DLM_2196 11c0a673ac864882b6b7cbd4c6634d83 138 SUPERFAMILY SSF51306 14 135 3.66E-24 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DLM_2196 11c0a673ac864882b6b7cbd4c6634d83 138 Gene3D G3DSA:2.10.109.10 25 137 6.1E-30 T 23-10-2018 DLM_2049 38d2bf8eee0b379fb3a4796b1a716a56 341 SUPERFAMILY SSF51556 1 334 3.74E-94 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_2049 38d2bf8eee0b379fb3a4796b1a716a56 341 Gene3D G3DSA:3.20.20.140 1 340 7.5E-98 T 23-10-2018 DLM_2049 38d2bf8eee0b379fb3a4796b1a716a56 341 Pfam PF04909 Amidohydrolase 3 330 4.4E-58 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_0205 bc73a0843e476dc12258b28d685cd618 411 SUPERFAMILY SSF141868 154 399 1.03E-77 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0205 bc73a0843e476dc12258b28d685cd618 411 Gene3D G3DSA:3.40.50.2300 15 146 1.2E-24 T 23-10-2018 DLM_0205 bc73a0843e476dc12258b28d685cd618 411 Pfam PF00563 EAL domain 153 386 3.9E-70 T 23-10-2018 IPR001633 EAL domain DLM_0205 bc73a0843e476dc12258b28d685cd618 411 SMART SM00052 146 391 4.8E-87 T 23-10-2018 IPR001633 EAL domain DLM_0205 bc73a0843e476dc12258b28d685cd618 411 Pfam PF00072 Response regulator receiver domain 17 131 1.7E-18 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0205 bc73a0843e476dc12258b28d685cd618 411 Gene3D G3DSA:3.20.20.450 151 403 9.2E-84 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0205 bc73a0843e476dc12258b28d685cd618 411 SUPERFAMILY SSF52172 14 150 8.54E-26 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0205 bc73a0843e476dc12258b28d685cd618 411 SMART SM00448 15 132 1.7E-15 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4391 0800e4aa303a6295d996b83e4c1e651c 214 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 9.2E-86 T 23-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4391 0800e4aa303a6295d996b83e4c1e651c 214 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.42 T 23-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4391 0800e4aa303a6295d996b83e4c1e651c 214 SUPERFAMILY SSF50447 2 211 8.83E-77 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_4391 0800e4aa303a6295d996b83e4c1e651c 214 Pfam PF00297 Ribosomal protein L3 73 185 4.3E-14 T 23-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4391 0800e4aa303a6295d996b83e4c1e651c 214 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 23-10-2018 IPR019926 Ribosomal protein L3, conserved site DLM_4391 0800e4aa303a6295d996b83e4c1e651c 214 Gene3D G3DSA:2.40.30.10 133 213 2.4E-15 T 23-10-2018 DLM_4391 0800e4aa303a6295d996b83e4c1e651c 214 Gene3D G3DSA:2.40.50.620 33 99 9.9E-14 T 23-10-2018 DLM_0155 26cf2f9234d6b58a113afec175383c49 353 Gene3D G3DSA:3.20.20.210 1 353 6.7E-153 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DLM_0155 26cf2f9234d6b58a113afec175383c49 353 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 346 4.2E-136 T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DLM_0155 26cf2f9234d6b58a113afec175383c49 353 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 346 1.0E-127 T 23-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DLM_0155 26cf2f9234d6b58a113afec175383c49 353 SUPERFAMILY SSF51726 1 352 1.03E-120 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DLM_0155 26cf2f9234d6b58a113afec175383c49 353 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 141 157 - T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DLM_0155 26cf2f9234d6b58a113afec175383c49 353 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 348 48.592 T 23-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DLM_0155 26cf2f9234d6b58a113afec175383c49 353 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DLM_3302 ba1be9b8ac126eed46fb82e185ad70a7 402 Gene3D G3DSA:1.20.1250.20 8 387 1.0E-49 T 23-10-2018 DLM_3302 ba1be9b8ac126eed46fb82e185ad70a7 402 SUPERFAMILY SSF103473 12 386 2.49E-50 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3302 ba1be9b8ac126eed46fb82e185ad70a7 402 Pfam PF07690 Major Facilitator Superfamily 20 233 1.7E-26 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2556 0d39076729db8d8e757d655a1894e8a1 250 Gene3D G3DSA:3.40.980.10 2 161 3.8E-40 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily DLM_2556 0d39076729db8d8e757d655a1894e8a1 250 Pfam PF00994 Probable molybdopterin binding domain 4 158 1.3E-26 T 23-10-2018 IPR001453 MoaB/Mog domain DLM_2556 0d39076729db8d8e757d655a1894e8a1 250 SUPERFAMILY SSF53218 2 166 1.7E-30 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily DLM_2556 0d39076729db8d8e757d655a1894e8a1 250 SMART SM00852 4 164 1.1E-30 T 23-10-2018 IPR001453 MoaB/Mog domain DLM_4517 83b12e3a42be636ad2590687d9594fa7 421 Gene3D G3DSA:3.40.640.10 58 317 8.3E-155 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_4517 83b12e3a42be636ad2590687d9594fa7 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 420 6.8E-188 T 23-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 DLM_4517 83b12e3a42be636ad2590687d9594fa7 421 PIRSF PIRSF000521 13 129 0.0094 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_4517 83b12e3a42be636ad2590687d9594fa7 421 PIRSF PIRSF000521 121 421 3.5E-40 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_4517 83b12e3a42be636ad2590687d9594fa7 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_4517 83b12e3a42be636ad2590687d9594fa7 421 Pfam PF00202 Aminotransferase class-III 21 419 1.5E-125 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_4517 83b12e3a42be636ad2590687d9594fa7 421 Gene3D G3DSA:3.90.1150.10 7 413 8.3E-155 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_4517 83b12e3a42be636ad2590687d9594fa7 421 SUPERFAMILY SSF53383 23 420 6.05E-127 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0296 8165092742e431d5d02cde4088994192 330 PIRSF PIRSF028188 9 328 8.7E-108 T 23-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type DLM_0296 8165092742e431d5d02cde4088994192 330 Gene3D G3DSA:3.75.10.10 25 320 2.1E-39 T 23-10-2018 DLM_0296 8165092742e431d5d02cde4088994192 330 SUPERFAMILY SSF55909 24 322 1.26E-31 T 23-10-2018 DLM_0296 8165092742e431d5d02cde4088994192 330 Pfam PF02274 Amidinotransferase 28 325 1.9E-55 T 23-10-2018 DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 SUPERFAMILY SSF55874 307 470 1.44E-37 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 SUPERFAMILY SSF47384 231 316 2.75E-14 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 8.0E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 8.0E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 8.0E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 Gene3D G3DSA:3.30.565.10 324 475 3.2E-36 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 Gene3D G3DSA:1.10.287.130 199 319 1.6E-20 T 23-10-2018 DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 471 3.6E-21 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 Pfam PF08521 Two-component sensor kinase N-terminal 27 171 4.1E-37 T 23-10-2018 IPR013727 Two-component sensor kinase, N-terminal DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 SMART SM00387 363 473 7.0E-32 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 316 5.9E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4142 e40b32282601c36f2d4e9fa53702adde 476 SMART SM00388 248 318 2.4E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1971 78c877bb698136803ee4ce9933f4f7f8 268 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 23-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 DLM_1971 78c877bb698136803ee4ce9933f4f7f8 268 Pfam PF01148 Cytidylyltransferase family 3 262 1.7E-56 T 23-10-2018 DLM_4452 d408b491de0995229d1452229721d086 362 Pfam PF00534 Glycosyl transferases group 1 165 299 1.5E-15 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 DLM_4452 d408b491de0995229d1452229721d086 362 SUPERFAMILY SSF53756 42 353 5.23E-45 T 23-10-2018 DLM_4452 d408b491de0995229d1452229721d086 362 Pfam PF13477 Glycosyl transferase 4-like 2 135 1.0E-17 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DLM_4452 d408b491de0995229d1452229721d086 362 Gene3D G3DSA:3.40.50.2000 165 330 1.4E-23 T 23-10-2018 DLM_4452 d408b491de0995229d1452229721d086 362 Gene3D G3DSA:3.40.50.2000 34 164 7.3E-14 T 23-10-2018 DLM_2197 c50724541977a7f469e4b7feae47e8f3 420 Pfam PF00817 impB/mucB/samB family 7 149 1.9E-34 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DLM_2197 c50724541977a7f469e4b7feae47e8f3 420 Pfam PF13438 Domain of unknown function (DUF4113) 370 419 1.6E-21 T 23-10-2018 IPR025188 Domain of unknown function DUF4113 DLM_2197 c50724541977a7f469e4b7feae47e8f3 420 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 350 1.2E-10 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DLM_2197 c50724541977a7f469e4b7feae47e8f3 420 SUPERFAMILY SSF56672 4 237 1.25E-68 T 23-10-2018 DLM_2197 c50724541977a7f469e4b7feae47e8f3 420 Gene3D G3DSA:3.30.70.270 6 154 4.0E-39 T 23-10-2018 DLM_2197 c50724541977a7f469e4b7feae47e8f3 420 Gene3D G3DSA:2.30.40.20 12 75 4.0E-39 T 23-10-2018 DLM_2197 c50724541977a7f469e4b7feae47e8f3 420 Gene3D G3DSA:1.10.150.20 179 231 2.7E-7 T 23-10-2018 DLM_2433 9ef11e014334128160e520cee3b8dec3 605 SMART SM00267 401 588 7.9E-12 T 23-10-2018 IPR000160 GGDEF domain DLM_2433 9ef11e014334128160e520cee3b8dec3 605 SMART SM00052 11 253 5.6E-40 T 23-10-2018 IPR001633 EAL domain DLM_2433 9ef11e014334128160e520cee3b8dec3 605 Pfam PF00990 Diguanylate cyclase, GGDEF domain 417 512 2.4E-16 T 23-10-2018 IPR000160 GGDEF domain DLM_2433 9ef11e014334128160e520cee3b8dec3 605 SUPERFAMILY SSF54631 279 405 1.61E-6 T 23-10-2018 DLM_2433 9ef11e014334128160e520cee3b8dec3 605 SUPERFAMILY SSF55073 418 580 1.02E-22 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2433 9ef11e014334128160e520cee3b8dec3 605 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 416 510 1.8E-14 T 23-10-2018 IPR000160 GGDEF domain DLM_2433 9ef11e014334128160e520cee3b8dec3 605 Pfam PF00563 EAL domain 23 248 6.3E-50 T 23-10-2018 IPR001633 EAL domain DLM_2433 9ef11e014334128160e520cee3b8dec3 605 SUPERFAMILY SSF141868 17 254 1.7E-64 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2433 9ef11e014334128160e520cee3b8dec3 605 Gene3D G3DSA:3.10.580.10 283 404 7.1E-6 T 23-10-2018 DLM_2433 9ef11e014334128160e520cee3b8dec3 605 Gene3D G3DSA:3.30.70.270 405 585 6.1E-26 T 23-10-2018 DLM_2433 9ef11e014334128160e520cee3b8dec3 605 Gene3D G3DSA:3.20.20.450 14 257 1.8E-63 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4049 e6ab0d02173548be8e5289614d72e06b 425 Gene3D G3DSA:3.40.50.2300 5 135 2.4E-21 T 23-10-2018 DLM_4049 e6ab0d02173548be8e5289614d72e06b 425 SUPERFAMILY SSF141868 144 364 3.01E-12 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4049 e6ab0d02173548be8e5289614d72e06b 425 SMART SM00448 5 124 6.3E-15 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4049 e6ab0d02173548be8e5289614d72e06b 425 Pfam PF00072 Response regulator receiver domain 8 121 2.7E-13 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4049 e6ab0d02173548be8e5289614d72e06b 425 Gene3D G3DSA:3.20.20.450 142 392 5.5E-14 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4049 e6ab0d02173548be8e5289614d72e06b 425 Pfam PF00563 EAL domain 145 363 5.5E-15 T 23-10-2018 IPR001633 EAL domain DLM_4049 e6ab0d02173548be8e5289614d72e06b 425 SUPERFAMILY SSF52172 3 136 5.83E-20 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2016 50dc1c0ddcf6997e62d1fb391f747b74 399 Pfam PF05762 VWA domain containing CoxE-like protein 185 274 6.9E-9 T 23-10-2018 IPR008912 Uncharacterised protein family CoxE-like DLM_2801 7c75198402fd789e38409426bdaca1fa 295 Gene3D G3DSA:3.40.50.1100 9 289 2.8E-106 T 23-10-2018 DLM_2801 7c75198402fd789e38409426bdaca1fa 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 23-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DLM_2801 7c75198402fd789e38409426bdaca1fa 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 282 9.9E-66 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DLM_2801 7c75198402fd789e38409426bdaca1fa 295 Gene3D G3DSA:3.40.50.1100 36 141 2.8E-106 T 23-10-2018 DLM_2801 7c75198402fd789e38409426bdaca1fa 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 293 2.0E-136 T 23-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DLM_2801 7c75198402fd789e38409426bdaca1fa 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 293 8.6E-118 T 23-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DLM_2801 7c75198402fd789e38409426bdaca1fa 295 SUPERFAMILY SSF53686 2 290 4.98E-90 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DLM_0656 61cc9a95234caf49721d3275f6834334 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 114 7.9E-22 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DLM_0656 61cc9a95234caf49721d3275f6834334 137 Gene3D G3DSA:2.170.150.70 5 115 5.3E-16 T 23-10-2018 DLM_0656 61cc9a95234caf49721d3275f6834334 137 SUPERFAMILY SSF51316 2 126 3.14E-42 T 23-10-2018 IPR011057 Mss4-like superfamily DLM_1902 44724cdaa68e7b0411b4aa533989a385 537 SMART SM00283 275 533 1.4E-56 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1902 44724cdaa68e7b0411b4aa533989a385 537 Gene3D G3DSA:1.10.287.950 207 537 9.2E-64 T 23-10-2018 DLM_1902 44724cdaa68e7b0411b4aa533989a385 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 503 6.3E-41 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1902 44724cdaa68e7b0411b4aa533989a385 537 SUPERFAMILY SSF58104 228 536 6.02E-65 T 23-10-2018 DLM_1902 44724cdaa68e7b0411b4aa533989a385 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 1.4E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1902 44724cdaa68e7b0411b4aa533989a385 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 23 1.4E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1902 44724cdaa68e7b0411b4aa533989a385 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 373 400 1.4E-22 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1902 44724cdaa68e7b0411b4aa533989a385 537 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 180 3.2E-15 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_4014 2f147b68e19b08d590a420941b0ba3d3 276 SUPERFAMILY SSF53335 23 274 5.14E-77 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4014 2f147b68e19b08d590a420941b0ba3d3 276 SMART SM00650 39 208 8.5E-85 T 23-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DLM_4014 2f147b68e19b08d590a420941b0ba3d3 276 Pfam PF00398 Ribosomal RNA adenine dimethylase 26 274 2.5E-65 T 23-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DLM_4014 2f147b68e19b08d590a420941b0ba3d3 276 Gene3D G3DSA:3.40.50.150 10 208 2.5E-65 T 23-10-2018 DLM_4014 2f147b68e19b08d590a420941b0ba3d3 276 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 23 275 55.709 T 23-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DLM_4014 2f147b68e19b08d590a420941b0ba3d3 276 Gene3D G3DSA:1.10.8.100 211 275 5.0E-24 T 23-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DLM_4014 2f147b68e19b08d590a420941b0ba3d3 276 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 25 274 1.4E-85 T 23-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DLM_2960 61717285eed4c7fb409085172d284b82 306 Gene3D G3DSA:1.10.10.10 13 102 1.6E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2960 61717285eed4c7fb409085172d284b82 306 SUPERFAMILY SSF53850 95 302 7.96E-25 T 23-10-2018 DLM_2960 61717285eed4c7fb409085172d284b82 306 SUPERFAMILY SSF46785 13 113 3.94E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2960 61717285eed4c7fb409085172d284b82 306 Gene3D G3DSA:3.40.190.290 103 305 1.6E-16 T 23-10-2018 DLM_2960 61717285eed4c7fb409085172d284b82 306 Pfam PF03466 LysR substrate binding domain 99 302 2.1E-26 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2960 61717285eed4c7fb409085172d284b82 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 3.0E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0043 afb8eb1d4a1ba05b8ff93700fd536664 254 SUPERFAMILY SSF52540 7 241 1.54E-63 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0043 afb8eb1d4a1ba05b8ff93700fd536664 254 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 8 254 2.8E-121 T 23-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DLM_0043 afb8eb1d4a1ba05b8ff93700fd536664 254 Pfam PF00005 ABC transporter 23 179 1.1E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0043 afb8eb1d4a1ba05b8ff93700fd536664 254 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0043 afb8eb1d4a1ba05b8ff93700fd536664 254 Gene3D G3DSA:3.40.50.300 6 252 1.1E-69 T 23-10-2018 DLM_0043 afb8eb1d4a1ba05b8ff93700fd536664 254 SMART SM00382 32 226 4.1E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2115 e5644eb31870e9a313a8ef736119839b 700 SUPERFAMILY SSF53098 272 474 2.02E-50 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_2115 e5644eb31870e9a313a8ef736119839b 700 Pfam PF00665 Integrase core domain 275 393 1.7E-14 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_2115 e5644eb31870e9a313a8ef736119839b 700 Pfam PF09299 Mu transposase, C-terminal 488 547 1.3E-18 T 23-10-2018 IPR015378 Transposase-like, Mu, C-terminal DLM_2115 e5644eb31870e9a313a8ef736119839b 700 Gene3D G3DSA:1.10.10.10 6 75 1.5E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2115 e5644eb31870e9a313a8ef736119839b 700 Gene3D G3DSA:2.30.30.130 484 550 4.0E-10 T 23-10-2018 IPR009004 Transposase, Mu, C-terminal DLM_2115 e5644eb31870e9a313a8ef736119839b 700 Gene3D G3DSA:3.30.420.10 261 481 9.5E-57 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_2115 e5644eb31870e9a313a8ef736119839b 700 SUPERFAMILY SSF50610 475 551 1.57E-21 T 23-10-2018 IPR009004 Transposase, Mu, C-terminal DLM_2115 e5644eb31870e9a313a8ef736119839b 700 Pfam PF02316 Mu DNA-binding domain 19 137 3.1E-12 T 23-10-2018 IPR003314 Mu-type HTH domain GO:0003677 DLM_2115 e5644eb31870e9a313a8ef736119839b 700 SUPERFAMILY SSF46955 6 69 2.47E-13 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_4122 c9d41b0b529e0bcf84f629f822de6227 246 Gene3D G3DSA:3.40.50.10090 37 163 4.7E-59 T 23-10-2018 DLM_4122 c9d41b0b529e0bcf84f629f822de6227 246 SUPERFAMILY SSF69618 5 242 1.12E-42 T 23-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4122 c9d41b0b529e0bcf84f629f822de6227 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 236 1.0E-31 T 23-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DLM_4122 c9d41b0b529e0bcf84f629f822de6227 246 Gene3D G3DSA:3.40.50.10090 8 234 4.7E-59 T 23-10-2018 DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 SMART SM00072 5 187 3.8E-64 T 23-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 SUPERFAMILY SSF52540 6 188 5.3E-66 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 Gene3D G3DSA:3.40.50.300 1 39 2.9E-5 T 23-10-2018 DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 184 8.1E-74 T 23-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 23-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 Hamap MF_00328 Guanylate kinase [gmk]. 4 187 36.928 T 23-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 Gene3D G3DSA:3.30.63.10 40 87 1.3E-22 T 23-10-2018 DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 Gene3D G3DSA:3.40.50.300 88 205 3.5E-36 T 23-10-2018 DLM_0127 ce6d88670830d49d0c32626b5b816c96 209 Pfam PF00625 Guanylate kinase 7 184 4.9E-51 T 23-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DLM_1607 7ee5fc24ae5e8fcf57eed6df7e4fc8ca 204 Gene3D G3DSA:1.10.357.10 23 204 7.5E-31 T 23-10-2018 DLM_1607 7ee5fc24ae5e8fcf57eed6df7e4fc8ca 204 SUPERFAMILY SSF46689 14 90 7.98E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1607 7ee5fc24ae5e8fcf57eed6df7e4fc8ca 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 4.2E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1607 7ee5fc24ae5e8fcf57eed6df7e4fc8ca 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 4.2E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1607 7ee5fc24ae5e8fcf57eed6df7e4fc8ca 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 1.1E-12 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1859 4fa68e3dca7c45a473e5eef4b7266332 457 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 452 1.8E-85 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_1859 4fa68e3dca7c45a473e5eef4b7266332 457 Pfam PF02321 Outer membrane efflux protein 273 451 1.2E-18 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1859 4fa68e3dca7c45a473e5eef4b7266332 457 Pfam PF02321 Outer membrane efflux protein 61 244 2.5E-15 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1859 4fa68e3dca7c45a473e5eef4b7266332 457 Gene3D G3DSA:1.20.1600.10 52 452 2.4E-104 T 23-10-2018 DLM_1859 4fa68e3dca7c45a473e5eef4b7266332 457 Gene3D G3DSA:2.20.200.10 98 342 2.4E-104 T 23-10-2018 DLM_1859 4fa68e3dca7c45a473e5eef4b7266332 457 SUPERFAMILY SSF56954 4 452 1.44E-86 T 23-10-2018 DLM_4169 673c12f31d3453ba2662b02468b42f21 296 Gene3D G3DSA:3.40.1090.20 134 208 4.5E-6 T 23-10-2018 DLM_4169 673c12f31d3453ba2662b02468b42f21 296 Gene3D G3DSA:3.40.1090.10 24 133 3.1E-26 T 23-10-2018 DLM_4169 673c12f31d3453ba2662b02468b42f21 296 SUPERFAMILY SSF52151 32 285 1.88E-59 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DLM_4169 673c12f31d3453ba2662b02468b42f21 296 Pfam PF01734 Patatin-like phospholipase 41 198 3.2E-23 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DLM_0635 219853b9b4359ff9885585d59b1ac742 343 SUPERFAMILY SSF161098 138 325 1.7E-21 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0635 219853b9b4359ff9885585d59b1ac742 343 Gene3D G3DSA:1.10.3720.10 132 341 3.0E-19 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0635 219853b9b4359ff9885585d59b1ac742 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 1.4E-28 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0635 219853b9b4359ff9885585d59b1ac742 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 48 3.4E-8 T 23-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DLM_1059 e34db0719839b6e332213edffa7d3dbf 817 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 139 232 1.9E-16 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_1059 e34db0719839b6e332213edffa7d3dbf 817 SUPERFAMILY SSF47203 367 514 4.67E-24 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_1059 e34db0719839b6e332213edffa7d3dbf 817 SUPERFAMILY SSF56645 120 362 1.1E-43 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_1059 e34db0719839b6e332213edffa7d3dbf 817 Pfam PF09317 Domain of unknown function (DUF1974) 521 800 2.0E-109 T 23-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 DLM_1059 e34db0719839b6e332213edffa7d3dbf 817 Gene3D G3DSA:2.40.110.10 236 366 1.8E-96 T 23-10-2018 DLM_1059 e34db0719839b6e332213edffa7d3dbf 817 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 367 514 4.2E-13 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_1059 e34db0719839b6e332213edffa7d3dbf 817 Gene3D G3DSA:1.10.540.10 122 235 1.8E-96 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_1059 e34db0719839b6e332213edffa7d3dbf 817 Gene3D G3DSA:1.20.140.10 367 514 1.8E-96 T 23-10-2018 DLM_1982 f77884950f8a3f865b1660e48093c8ed 262 ProSitePatterns PS00893 Nudix box signature. 166 187 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_1982 f77884950f8a3f865b1660e48093c8ed 262 Gene3D G3DSA:3.90.79.10 133 260 7.8E-37 T 23-10-2018 DLM_1982 f77884950f8a3f865b1660e48093c8ed 262 SUPERFAMILY SSF55811 8 103 1.17E-11 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_1982 f77884950f8a3f865b1660e48093c8ed 262 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 131 2.7E-6 T 23-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 DLM_1982 f77884950f8a3f865b1660e48093c8ed 262 Gene3D G3DSA:3.90.79.20 8 132 3.0E-21 T 23-10-2018 DLM_1982 f77884950f8a3f865b1660e48093c8ed 262 SUPERFAMILY SSF55811 86 256 1.62E-41 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_1982 f77884950f8a3f865b1660e48093c8ed 262 Pfam PF00293 NUDIX domain 136 238 5.7E-18 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_2137 3fa0767996111d5c9470c61fc72771cb 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 2.9E-6 T 23-10-2018 DLM_2137 3fa0767996111d5c9470c61fc72771cb 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 529 544 2.9E-6 T 23-10-2018 DLM_2137 3fa0767996111d5c9470c61fc72771cb 583 Pfam PF00890 FAD binding domain 16 554 8.8E-92 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_2137 3fa0767996111d5c9470c61fc72771cb 583 SUPERFAMILY SSF56425 348 507 5.58E-31 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_2137 3fa0767996111d5c9470c61fc72771cb 583 Gene3D G3DSA:3.90.700.10 354 502 1.4E-134 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_2137 3fa0767996111d5c9470c61fc72771cb 583 Gene3D G3DSA:3.50.50.60 14 565 1.4E-134 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2137 3fa0767996111d5c9470c61fc72771cb 583 SUPERFAMILY SSF51905 14 573 1.27E-34 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 Gene3D G3DSA:3.40.50.2300 178 316 6.1E-21 T 23-10-2018 DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 PIRSF PIRSF002867 1 315 8.7E-104 T 23-10-2018 IPR024181 Chemotaxis response regulator CheV DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 Gene3D G3DSA:2.40.50.180 45 160 2.7E-28 T 23-10-2018 DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 Pfam PF01584 CheW-like domain 22 162 3.5E-34 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 SUPERFAMILY SSF52172 183 312 5.41E-20 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 SUPERFAMILY SSF50341 16 162 1.01E-28 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 SMART SM00260 17 160 3.8E-23 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 Pfam PF00072 Response regulator receiver domain 184 303 2.2E-12 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 SMART SM00448 182 311 1.2E-8 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2895 771f2f14b6c0e55c2bff8b0cdce73f4d 316 Gene3D G3DSA:2.30.30.40 36 154 2.7E-28 T 23-10-2018 DLM_0982 77668f0574f69377502f17cdb78a2466 241 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 167 182 - T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 215 227 - T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 Pfam PF00813 FliP family 43 234 9.3E-80 T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 59 79 1.9E-66 T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 79 98 1.9E-66 T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 40 59 1.9E-66 T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 212 237 1.9E-66 T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 167 187 1.9E-66 T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 188 209 1.9E-66 T 23-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 110 2.5E-25 T 23-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 38 47 2.5E-25 T 23-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 150 2.5E-25 T 23-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 172 2.5E-25 T 23-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 124 2.5E-25 T 23-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 228 238 2.5E-25 T 23-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DLM_0982 77668f0574f69377502f17cdb78a2466 241 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 42 238 7.6E-89 T 23-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 SMART SM00342 165 247 1.2E-28 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 Pfam PF12833 Helix-turn-helix domain 171 248 1.1E-21 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 SUPERFAMILY SSF46689 150 199 2.69E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 SUPERFAMILY SSF46689 202 248 2.24E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 Gene3D G3DSA:1.10.10.60 208 251 5.7E-12 T 23-10-2018 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 202 243 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 Pfam PF02311 AraC-like ligand binding domain 17 117 2.6E-12 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 216 231 1.0E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 247 1.0E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 Gene3D G3DSA:1.10.10.60 151 207 3.2E-14 T 23-10-2018 DLM_1747 23f72798f92703b3a4ea07e1df193780 251 SUPERFAMILY SSF51215 19 131 2.62E-12 T 23-10-2018 IPR037923 Transcription regulator HTH-like DLM_3618 abc11fd1d0c298b591894fccf7b9ded4 202 Pfam PF02525 Flavodoxin-like fold 1 199 3.6E-49 T 23-10-2018 IPR003680 Flavodoxin-like fold DLM_3618 abc11fd1d0c298b591894fccf7b9ded4 202 Gene3D G3DSA:3.40.50.360 1 201 2.4E-63 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_3618 abc11fd1d0c298b591894fccf7b9ded4 202 SUPERFAMILY SSF52218 1 200 3.71E-57 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_3618 abc11fd1d0c298b591894fccf7b9ded4 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 201 32.066 T 23-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DLM_1640 ad1b82808a688f3f1baa1186c91e0895 313 Gene3D G3DSA:3.40.800.20 3 298 7.4E-68 T 23-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1640 ad1b82808a688f3f1baa1186c91e0895 313 SUPERFAMILY SSF52768 7 281 1.92E-76 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily DLM_1640 ad1b82808a688f3f1baa1186c91e0895 313 Pfam PF00850 Histone deacetylase domain 40 278 9.5E-49 T 23-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1640 ad1b82808a688f3f1baa1186c91e0895 313 PRINTS PR01270 Histone deacetylase superfamily signature 112 135 1.3E-15 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1640 ad1b82808a688f3f1baa1186c91e0895 313 PRINTS PR01270 Histone deacetylase superfamily signature 220 230 1.3E-15 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1640 ad1b82808a688f3f1baa1186c91e0895 313 PRINTS PR01270 Histone deacetylase superfamily signature 146 161 1.3E-15 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_2198 6d3f19a229dfbc10f1e4f0286c536236 191 Pfam PF02525 Flavodoxin-like fold 1 185 4.8E-41 T 23-10-2018 IPR003680 Flavodoxin-like fold DLM_2198 6d3f19a229dfbc10f1e4f0286c536236 191 SUPERFAMILY SSF52218 1 189 5.99E-48 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_2198 6d3f19a229dfbc10f1e4f0286c536236 191 Gene3D G3DSA:3.40.50.360 1 190 7.8E-50 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_2244 f124f7956e085f1e5b1753319f545fc4 161 SMART SM00347 28 129 1.5E-11 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2244 f124f7956e085f1e5b1753319f545fc4 161 Pfam PF01047 MarR family 42 93 8.4E-10 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2244 f124f7956e085f1e5b1753319f545fc4 161 SUPERFAMILY SSF46785 3 143 1.77E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2244 f124f7956e085f1e5b1753319f545fc4 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.3E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2244 f124f7956e085f1e5b1753319f545fc4 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.3E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2244 f124f7956e085f1e5b1753319f545fc4 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.3E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2244 f124f7956e085f1e5b1753319f545fc4 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 23-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DLM_2244 f124f7956e085f1e5b1753319f545fc4 161 Gene3D G3DSA:1.10.10.10 10 145 1.6E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2832 aed94b8c82853d0d6f07528649e95218 587 Pfam PF05947 Type VI secretion system, TssF 6 585 2.9E-179 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like DLM_2832 aed94b8c82853d0d6f07528649e95218 587 PIRSF PIRSF028304 1 587 1.8E-158 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like DLM_2832 aed94b8c82853d0d6f07528649e95218 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 586 1.9E-170 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like DLM_0950 b1f3acd99400e256add90d496bf20d47 302 Pfam PF00892 EamA-like transporter family 7 130 2.1E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_0950 b1f3acd99400e256add90d496bf20d47 302 Pfam PF00892 EamA-like transporter family 142 284 1.9E-20 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_0950 b1f3acd99400e256add90d496bf20d47 302 SUPERFAMILY SSF103481 203 287 2.48E-11 T 23-10-2018 DLM_0950 b1f3acd99400e256add90d496bf20d47 302 SUPERFAMILY SSF103481 41 134 2.35E-11 T 23-10-2018 DLM_0611 4d3714bff58e8c69a751e30525fd71ab 267 Gene3D G3DSA:3.90.850.10 1 267 6.8E-81 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_0611 4d3714bff58e8c69a751e30525fd71ab 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 265 2.0E-6 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DLM_0611 4d3714bff58e8c69a751e30525fd71ab 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 1.3E-138 T 23-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 DLM_0611 4d3714bff58e8c69a751e30525fd71ab 267 SUPERFAMILY SSF56529 2 267 1.31E-79 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 Gene3D G3DSA:2.40.110.10 128 224 6.1E-25 T 23-10-2018 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 SUPERFAMILY SSF56645 24 225 1.09E-38 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 Gene3D G3DSA:1.20.140.10 228 402 2.3E-53 T 23-10-2018 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 PIRSF PIRSF016578 9 394 3.8E-23 T 23-10-2018 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 Gene3D G3DSA:1.10.540.10 20 126 3.2E-25 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 28 116 8.5E-12 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 150 213 3.9E-9 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 SUPERFAMILY SSF47203 239 378 5.93E-18 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_1524 a178ce23c5224dcbb10fffce3702d84a 402 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 377 2.9E-16 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DLM_2220 d015cdf4f429fcf9d299ba82c6f84248 384 SUPERFAMILY SSF111342 8 302 5.75E-72 T 23-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DLM_2220 d015cdf4f429fcf9d299ba82c6f84248 384 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 26 375 2.7E-65 T 23-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DLM_2220 d015cdf4f429fcf9d299ba82c6f84248 384 Pfam PF01888 CbiD 19 282 1.8E-78 T 23-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DLM_2220 d015cdf4f429fcf9d299ba82c6f84248 384 Gene3D G3DSA:3.30.2110.10 21 194 8.1E-44 T 23-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DLM_2220 d015cdf4f429fcf9d299ba82c6f84248 384 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 19 378 26.296 T 23-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DLM_2220 d015cdf4f429fcf9d299ba82c6f84248 384 PIRSF PIRSF026782 16 383 6.9E-107 T 23-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DLM_1371 66f79a1f174d178368f2745d382dc6ac 232 SMART SM00382 26 211 1.2E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1371 66f79a1f174d178368f2745d382dc6ac 232 Gene3D G3DSA:3.40.50.300 1 230 7.7E-60 T 23-10-2018 DLM_1371 66f79a1f174d178368f2745d382dc6ac 232 Pfam PF00005 ABC transporter 17 161 4.1E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1371 66f79a1f174d178368f2745d382dc6ac 232 SUPERFAMILY SSF52540 2 222 1.01E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1371 66f79a1f174d178368f2745d382dc6ac 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 7.6E-106 T 23-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE DLM_2924 37cc7cf467546e063d4bf67704926e9c 250 Pfam PF08241 Methyltransferase domain 43 130 1.8E-13 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DLM_2924 37cc7cf467546e063d4bf67704926e9c 250 SUPERFAMILY SSF53335 1 158 2.74E-28 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2924 37cc7cf467546e063d4bf67704926e9c 250 Gene3D G3DSA:3.40.50.150 20 243 1.9E-70 T 23-10-2018 DLM_2924 37cc7cf467546e063d4bf67704926e9c 250 Gene3D G3DSA:1.10.10.2560 136 234 1.9E-70 T 23-10-2018 DLM_4369 83c1b10b72aab250cf6d9720410304d3 437 Pfam PF05193 Peptidase M16 inactive domain 192 368 8.7E-34 T 23-10-2018 IPR007863 Peptidase M16, C-terminal DLM_4369 83c1b10b72aab250cf6d9720410304d3 437 Gene3D G3DSA:3.30.830.10 27 238 5.8E-44 T 23-10-2018 DLM_4369 83c1b10b72aab250cf6d9720410304d3 437 Gene3D G3DSA:3.30.830.10 251 436 2.0E-50 T 23-10-2018 DLM_4369 83c1b10b72aab250cf6d9720410304d3 437 SUPERFAMILY SSF63411 23 231 1.83E-39 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DLM_4369 83c1b10b72aab250cf6d9720410304d3 437 Pfam PF00675 Insulinase (Peptidase family M16) 36 182 2.5E-6 T 23-10-2018 IPR011765 Peptidase M16, N-terminal DLM_4369 83c1b10b72aab250cf6d9720410304d3 437 SUPERFAMILY SSF63411 258 435 7.5E-43 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 Gene3D G3DSA:3.40.50.970 56 471 3.0E-132 T 23-10-2018 DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 Gene3D G3DSA:3.40.50.920 706 886 9.4E-75 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 PIRSF PIRSF000156 1 887 0.0 T 23-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 SUPERFAMILY SSF52518 473 700 4.94E-99 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 SUPERFAMILY SSF52922 701 885 2.26E-60 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 SUPERFAMILY SSF52518 57 468 3.54E-143 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 883 0.0 T 23-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 136 293 4.5E-7 T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DLM_3773 43fcd1e7c3b45379421b0edadfac0eea 887 Gene3D G3DSA:3.40.50.970 472 705 6.2E-109 T 23-10-2018 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 Pfam PF00216 Bacterial DNA-binding protein 1 94 2.5E-27 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 SUPERFAMILY SSF47729 1 95 2.36E-27 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 95 2.2E-39 T 23-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 98 28.989 T 23-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 Gene3D G3DSA:4.10.520.10 1 97 4.2E-32 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 1.5E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 1.5E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 1.5E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2808 d66cbcb97e9a8a4987e64b2b23149cdd 104 SMART SM00411 1 95 2.2E-38 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PIRSF PIRSF016599 1 484 6.7E-193 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 SUPERFAMILY SSF53187 10 479 1.64E-60 T 23-10-2018 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 427 443 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 362 380 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 449 471 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 3.7E-70 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 Pfam PF01546 Peptidase family M20/M25/M40 73 478 2.6E-18 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 Gene3D G3DSA:3.40.630.10 1 227 5.2E-58 T 23-10-2018 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 Pfam PF07687 Peptidase dimerisation domain 209 289 1.1E-6 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 7 481 6.9E-166 T 23-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DLM_1148 a60949fdf057b6b4de282af02c86d8bc 485 Gene3D G3DSA:3.40.630.10 372 484 3.7E-23 T 23-10-2018 DLM_3753 15844005dca6ad0e7e959952065cdc50 373 Gene3D G3DSA:3.20.20.140 50 339 3.0E-105 T 23-10-2018 DLM_3753 15844005dca6ad0e7e959952065cdc50 373 PIRSF PIRSF038994 32 372 2.2E-99 T 23-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DLM_3753 15844005dca6ad0e7e959952065cdc50 373 Pfam PF01979 Amidohydrolase family 46 354 3.4E-15 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_3753 15844005dca6ad0e7e959952065cdc50 373 SUPERFAMILY SSF51556 50 338 1.79E-82 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_3753 15844005dca6ad0e7e959952065cdc50 373 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 45 362 8.2E-71 T 23-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DLM_3753 15844005dca6ad0e7e959952065cdc50 373 Gene3D G3DSA:2.30.40.10 42 366 3.0E-105 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_3753 15844005dca6ad0e7e959952065cdc50 373 SUPERFAMILY SSF51338 8 370 1.76E-5 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 Pfam PF02347 Glycine cleavage system P-protein 444 741 2.1E-13 T 23-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 Pfam PF02347 Glycine cleavage system P-protein 15 436 3.4E-169 T 23-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 SUPERFAMILY SSF53383 468 944 7.26E-100 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 6 949 25.095 T 23-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 15 943 0.0 T 23-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 SUPERFAMILY SSF53383 15 435 4.43E-93 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 Gene3D G3DSA:3.40.640.10 93 351 8.6E-98 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 Gene3D G3DSA:3.40.640.10 516 746 6.5E-64 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2875 def0a8ac4fcdc8443b67fdc876f200ce 950 Gene3D G3DSA:3.90.1150.10 758 895 3.5E-40 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1415 f2baa091429b0f294bc83ecd3f950dba 301 Gene3D G3DSA:1.10.10.10 3 89 3.2E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1415 f2baa091429b0f294bc83ecd3f950dba 301 Pfam PF03466 LysR substrate binding domain 88 293 1.3E-45 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1415 f2baa091429b0f294bc83ecd3f950dba 301 Gene3D G3DSA:3.40.190.290 91 293 1.1E-59 T 23-10-2018 DLM_1415 f2baa091429b0f294bc83ecd3f950dba 301 SUPERFAMILY SSF46785 5 88 1.82E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1415 f2baa091429b0f294bc83ecd3f950dba 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.7E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1415 f2baa091429b0f294bc83ecd3f950dba 301 SUPERFAMILY SSF53850 90 295 2.71E-45 T 23-10-2018 DLM_1663 c74d4e54e98d4dc172cfa6cea720194a 449 Pfam PF01554 MatE 246 388 3.8E-10 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DLM_1663 c74d4e54e98d4dc172cfa6cea720194a 449 Pfam PF01554 MatE 22 181 3.9E-17 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DLM_1663 c74d4e54e98d4dc172cfa6cea720194a 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 2.8E-70 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DLM_1107 444b4e657683019b8d3cbf974d61b05d 104 Pfam PF12112 Protein of unknown function (DUF3579) 5 89 3.2E-38 T 23-10-2018 IPR021969 Protein of unknown function DUF3579 DLM_1107 444b4e657683019b8d3cbf974d61b05d 104 Gene3D G3DSA:3.30.70.2340 3 98 5.8E-37 T 23-10-2018 DLM_3940 18a0e311b44651654064e39499feb62c 309 SUPERFAMILY SSF53335 44 172 3.19E-14 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3940 18a0e311b44651654064e39499feb62c 309 SMART SM00028 247 280 0.004 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3940 18a0e311b44651654064e39499feb62c 309 Gene3D G3DSA:1.25.40.10 221 304 2.1E-9 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3940 18a0e311b44651654064e39499feb62c 309 SUPERFAMILY SSF48452 223 285 7.59E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3940 18a0e311b44651654064e39499feb62c 309 Pfam PF08241 Methyltransferase domain 44 114 2.0E-9 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DLM_3940 18a0e311b44651654064e39499feb62c 309 Gene3D G3DSA:3.40.50.150 25 181 1.8E-13 T 23-10-2018 DLM_3815 0bdbd9722d35ba24ceb070380941750b 177 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 30 171 3.9E-56 T 23-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DLM_3815 0bdbd9722d35ba24ceb070380941750b 177 Pfam PF01467 Cytidylyltransferase-like 43 137 8.9E-14 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DLM_3815 0bdbd9722d35ba24ceb070380941750b 177 SUPERFAMILY SSF52374 39 169 4.22E-21 T 23-10-2018 DLM_3815 0bdbd9722d35ba24ceb070380941750b 177 Gene3D G3DSA:3.40.50.620 25 175 3.9E-33 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3815 0bdbd9722d35ba24ceb070380941750b 177 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 40 104 1.1E-12 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 SMART SM00116 229 276 5.6 T 23-10-2018 IPR000644 CBS domain DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 SMART SM00116 165 213 2.0E-5 T 23-10-2018 IPR000644 CBS domain DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 Gene3D G3DSA:2.60.120.10 9 143 8.5E-18 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 Gene3D G3DSA:3.10.580.10 149 286 1.2E-23 T 23-10-2018 DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 SUPERFAMILY SSF54631 159 273 2.32E-22 T 23-10-2018 DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 Pfam PF00571 CBS domain 222 273 2.1E-4 T 23-10-2018 IPR000644 CBS domain DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 Pfam PF00571 CBS domain 160 211 4.7E-7 T 23-10-2018 IPR000644 CBS domain DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 Pfam PF00027 Cyclic nucleotide-binding domain 35 120 1.8E-10 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 475 612 2.9E-33 T 23-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 SMART SM00100 17 136 1.4E-8 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 SUPERFAMILY SSF51206 15 141 1.96E-20 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like DLM_0664 82b981f88ad0d4c49c96f947fd21a6b9 614 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 436 1.5E-34 T 23-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 Pfam PF14520 Helix-hairpin-helix domain 72 129 2.1E-19 T 23-10-2018 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 Gene3D G3DSA:1.10.150.20 67 139 1.0E-28 T 23-10-2018 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 SMART SM00278 73 92 0.41 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 SMART SM00278 108 127 0.0074 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 Pfam PF01330 RuvA N terminal domain 1 62 7.7E-23 T 23-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 SUPERFAMILY SSF46929 153 196 1.57E-8 T 23-10-2018 IPR036267 RuvA, C-terminal domain superfamily DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 Pfam PF07499 RuvA, C-terminal domain 153 195 2.0E-12 T 23-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 SUPERFAMILY SSF47781 66 133 1.02E-22 T 23-10-2018 IPR010994 RuvA domain 2-like DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 Gene3D G3DSA:1.10.8.10 141 196 3.0E-5 T 23-10-2018 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 SUPERFAMILY SSF50249 1 63 9.71E-20 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 Gene3D G3DSA:2.40.50.140 1 66 3.5E-29 T 23-10-2018 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 195 2.6E-59 T 23-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DLM_4353 9e57fab337a258d7605c8356ae1c4318 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 32.314 T 23-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DLM_3564 771320dc2133b0d35a25db922b7ede85 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 261 1.2E-73 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_3564 771320dc2133b0d35a25db922b7ede85 262 SUPERFAMILY SSF52096 17 261 3.05E-82 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_3564 771320dc2133b0d35a25db922b7ede85 262 Gene3D G3DSA:3.90.226.10 12 204 3.7E-67 T 23-10-2018 DLM_3564 771320dc2133b0d35a25db922b7ede85 262 Gene3D G3DSA:1.10.12.10 205 261 4.9E-21 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 Gene3D G3DSA:1.20.58.410 6 96 1.5E-5 T 23-10-2018 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 Pfam PF00472 RF-1 domain 213 321 6.3E-40 T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 SMART SM00937 67 178 1.4E-65 T 23-10-2018 IPR005139 Peptide chain release factor GO:0006415 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.241 T 23-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 Gene3D G3DSA:3.30.160.20 210 297 2.6E-94 T 23-10-2018 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 Pfam PF03462 PCRF domain 13 203 5.0E-73 T 23-10-2018 IPR005139 Peptide chain release factor GO:0006415 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 SUPERFAMILY SSF75620 12 353 1.96E-134 T 23-10-2018 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 Gene3D G3DSA:3.30.70.1660 112 341 2.6E-94 T 23-10-2018 DLM_4053 d4fa6f7dca4e3794ec3d98dc5d0d7b5f 358 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 355 1.9E-158 T 23-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DLM_1270 3a369e72cb653d6e486d6fd76e8fd4fa 527 Pfam PF06074 Protein of unknown function (DUF935) 4 524 2.4E-195 T 23-10-2018 IPR009279 Protein of unknown function DUF935 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 Pfam PF00361 Proton-conducting membrane transporter 136 428 1.0E-82 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 277 299 2.1E-11 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 431 453 2.1E-11 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 2.1E-11 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 2.1E-11 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 1.9E-26 T 23-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 668 1.2E-251 T 23-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 432 451 5.3E-67 T 23-10-2018 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 5.3E-67 T 23-10-2018 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 327 339 5.3E-67 T 23-10-2018 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 5.3E-67 T 23-10-2018 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 258 5.3E-67 T 23-10-2018 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 5.3E-67 T 23-10-2018 DLM_0060 cb9fa84fe427b5ae032f5b19604e9a61 676 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 259 285 5.3E-67 T 23-10-2018 DLM_1973 6f39ed465d8fe3484847806df33e8be6 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.925 T 23-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DLM_1973 6f39ed465d8fe3484847806df33e8be6 185 Gene3D G3DSA:3.30.1360.40 31 105 5.9E-65 T 23-10-2018 DLM_1973 6f39ed465d8fe3484847806df33e8be6 185 Pfam PF01765 Ribosome recycling factor 20 183 3.9E-61 T 23-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DLM_1973 6f39ed465d8fe3484847806df33e8be6 185 Gene3D G3DSA:1.10.132.20 12 182 5.9E-65 T 23-10-2018 DLM_1973 6f39ed465d8fe3484847806df33e8be6 185 SUPERFAMILY SSF55194 1 185 3.01E-70 T 23-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 DLM_1973 6f39ed465d8fe3484847806df33e8be6 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 6.6E-68 T 23-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DLM_3698 ed48330993f60e98e9f18468c1eca139 699 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 1 694 3.1E-291 T 23-10-2018 IPR017750 ATPase, type I secretion system DLM_3698 ed48330993f60e98e9f18468c1eca139 699 SMART SM00382 490 676 6.5E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3698 ed48330993f60e98e9f18468c1eca139 699 Gene3D G3DSA:3.90.70.10 1 121 9.9E-32 T 23-10-2018 DLM_3698 ed48330993f60e98e9f18468c1eca139 699 Gene3D G3DSA:1.20.1560.10 148 448 2.0E-49 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_3698 ed48330993f60e98e9f18468c1eca139 699 SUPERFAMILY SSF52540 453 687 5.43E-77 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3698 ed48330993f60e98e9f18468c1eca139 699 Pfam PF00005 ABC transporter 481 630 2.2E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3698 ed48330993f60e98e9f18468c1eca139 699 ProSitePatterns PS00211 ABC transporters family signature. 602 616 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3698 ed48330993f60e98e9f18468c1eca139 699 SUPERFAMILY SSF90123 137 449 7.59E-50 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_3698 ed48330993f60e98e9f18468c1eca139 699 Gene3D G3DSA:3.40.50.300 454 696 1.2E-84 T 23-10-2018 DLM_3698 ed48330993f60e98e9f18468c1eca139 699 Pfam PF00664 ABC transporter transmembrane region 153 412 4.5E-23 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DLM_3733 31765cef3f903cee3821d53f43a446e0 588 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 1.7E-55 T 23-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DLM_3733 31765cef3f903cee3821d53f43a446e0 588 SUPERFAMILY SSF52518 370 565 1.12E-67 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3733 31765cef3f903cee3821d53f43a446e0 588 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 564 2.4E-251 T 23-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DLM_3733 31765cef3f903cee3821d53f43a446e0 588 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 541 8.0E-50 T 23-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DLM_3733 31765cef3f903cee3821d53f43a446e0 588 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 2.7E-44 T 23-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DLM_3733 31765cef3f903cee3821d53f43a446e0 588 SUPERFAMILY SSF52467 186 360 4.05E-63 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DLM_3733 31765cef3f903cee3821d53f43a446e0 588 Gene3D G3DSA:3.40.50.970 365 569 5.4E-65 T 23-10-2018 DLM_3733 31765cef3f903cee3821d53f43a446e0 588 SUPERFAMILY SSF52518 2 183 1.35E-64 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_3733 31765cef3f903cee3821d53f43a446e0 588 Gene3D G3DSA:3.40.50.1220 188 358 1.2E-59 T 23-10-2018 DLM_3733 31765cef3f903cee3821d53f43a446e0 588 Gene3D G3DSA:3.40.50.970 1 184 5.7E-72 T 23-10-2018 DLM_1768 a6fe9728922a70222129084fd8aeac9b 397 Pfam PF00589 Phage integrase family 204 374 1.3E-18 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DLM_1768 a6fe9728922a70222129084fd8aeac9b 397 Gene3D G3DSA:1.10.150.130 41 168 4.9E-11 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal DLM_1768 a6fe9728922a70222129084fd8aeac9b 397 SUPERFAMILY SSF56349 47 381 1.53E-41 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DLM_1768 a6fe9728922a70222129084fd8aeac9b 397 Gene3D G3DSA:1.10.443.10 178 381 6.7E-31 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DLM_3479 d3f84e7f21d6f13fe2ca152f850335e9 129 SUPERFAMILY SSF69118 4 122 6.96E-35 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DLM_3479 d3f84e7f21d6f13fe2ca152f850335e9 129 Gene3D G3DSA:1.20.1290.10 4 123 2.7E-37 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DLM_3479 d3f84e7f21d6f13fe2ca152f850335e9 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 2.0E-21 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 52 135 9.6E-12 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 SUPERFAMILY SSF47203 255 417 1.27E-23 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 29 418 3.7E-183 T 23-10-2018 IPR023922 Sulphate-starvation-induced SfnB DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 Gene3D G3DSA:1.20.140.10 244 416 5.1E-52 T 23-10-2018 DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 Gene3D G3DSA:1.10.540.10 36 142 2.0E-22 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 Gene3D G3DSA:2.40.110.10 144 243 3.7E-22 T 23-10-2018 DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 SUPERFAMILY SSF56645 42 243 1.16E-42 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 PIRSF PIRSF016578 22 407 3.8E-29 T 23-10-2018 DLM_1539 e90aa32f3f920763fd27d5d9d67c4718 418 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 261 393 9.8E-25 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DLM_2575 67c4294074b867120b2c98012a40c1b1 385 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 342 1.9E-124 T 23-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 DLM_2575 67c4294074b867120b2c98012a40c1b1 385 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-10-2018 IPR001482 Type II/IV secretion system protein DLM_2575 67c4294074b867120b2c98012a40c1b1 385 Pfam PF00437 Type II/IV secretion system protein 8 269 1.0E-36 T 23-10-2018 IPR001482 Type II/IV secretion system protein DLM_2575 67c4294074b867120b2c98012a40c1b1 385 Gene3D G3DSA:3.30.450.90 2 99 1.6E-25 T 23-10-2018 DLM_2575 67c4294074b867120b2c98012a40c1b1 385 SUPERFAMILY SSF52540 4 336 5.87E-60 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2575 67c4294074b867120b2c98012a40c1b1 385 Gene3D G3DSA:3.40.50.300 101 358 2.3E-88 T 23-10-2018 DLM_0438 74b2bf471f7fc48b426862cb13ee93a1 249 SMART SM00479 11 183 1.2E-47 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_0438 74b2bf471f7fc48b426862cb13ee93a1 249 SUPERFAMILY SSF53098 7 184 3.46E-52 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0438 74b2bf471f7fc48b426862cb13ee93a1 249 Pfam PF00929 Exonuclease 13 173 4.0E-35 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_0438 74b2bf471f7fc48b426862cb13ee93a1 249 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 14 194 2.0E-54 T 23-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_0438 74b2bf471f7fc48b426862cb13ee93a1 249 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 238 1.2E-89 T 23-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_0438 74b2bf471f7fc48b426862cb13ee93a1 249 Gene3D G3DSA:3.30.420.10 7 189 1.2E-53 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1694 0233aa5c1e4af874d630e1a59a70eaa9 140 Gene3D G3DSA:2.60.120.10 3 132 7.9E-49 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_1694 0233aa5c1e4af874d630e1a59a70eaa9 140 SUPERFAMILY SSF51182 9 132 4.89E-32 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_1694 0233aa5c1e4af874d630e1a59a70eaa9 140 Pfam PF07883 Cupin domain 44 101 8.5E-11 T 23-10-2018 IPR013096 Cupin 2, conserved barrel DLM_3467 cc1d4cfb6c8dd6a814514858dcb0eadb 470 SUPERFAMILY SSF53067 3 234 6.72E-61 T 23-10-2018 DLM_3467 cc1d4cfb6c8dd6a814514858dcb0eadb 470 PIRSF PIRSF000538 1 466 1.1E-97 T 23-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DLM_3467 cc1d4cfb6c8dd6a814514858dcb0eadb 470 Gene3D G3DSA:3.30.420.40 233 467 8.8E-48 T 23-10-2018 DLM_3467 cc1d4cfb6c8dd6a814514858dcb0eadb 470 SUPERFAMILY SSF53067 234 430 2.12E-36 T 23-10-2018 DLM_3467 cc1d4cfb6c8dd6a814514858dcb0eadb 470 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 214 5.6E-42 T 23-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DLM_3467 cc1d4cfb6c8dd6a814514858dcb0eadb 470 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 241 426 2.3E-29 T 23-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DLM_3467 cc1d4cfb6c8dd6a814514858dcb0eadb 470 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 123 135 - T 23-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DLM_3467 cc1d4cfb6c8dd6a814514858dcb0eadb 470 Gene3D G3DSA:3.30.420.40 2 232 5.8E-70 T 23-10-2018 DLM_0423 f2de7eebfdee0e5fbe8b7fd7d6135e1c 256 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 207 5.0E-31 T 23-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_0423 f2de7eebfdee0e5fbe8b7fd7d6135e1c 256 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 63 71 - T 23-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_0423 f2de7eebfdee0e5fbe8b7fd7d6135e1c 256 Gene3D G3DSA:3.40.50.1860 3 231 2.5E-73 T 23-10-2018 DLM_0423 f2de7eebfdee0e5fbe8b7fd7d6135e1c 256 SUPERFAMILY SSF53681 2 99 3.92E-30 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_0423 f2de7eebfdee0e5fbe8b7fd7d6135e1c 256 Hamap MF_00258 Glutamate racemase [murI]. 1 247 29.793 T 23-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_0423 f2de7eebfdee0e5fbe8b7fd7d6135e1c 256 TIGRFAM TIGR00067 glut_race: glutamate racemase 2 231 7.3E-55 T 23-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_0423 f2de7eebfdee0e5fbe8b7fd7d6135e1c 256 Gene3D G3DSA:3.40.50.1860 88 199 2.5E-73 T 23-10-2018 DLM_0423 f2de7eebfdee0e5fbe8b7fd7d6135e1c 256 SUPERFAMILY SSF53681 101 232 5.89E-32 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_2933 88a0026e5f03d48a95e2c3540204fcc0 508 PIRSF PIRSF001394 1 508 3.2E-222 T 23-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 DLM_2933 88a0026e5f03d48a95e2c3540204fcc0 508 SUPERFAMILY SSF117457 320 489 5.75E-63 T 23-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DLM_2933 88a0026e5f03d48a95e2c3540204fcc0 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 328 488 3.2E-48 T 23-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DLM_2933 88a0026e5f03d48a95e2c3540204fcc0 508 Gene3D G3DSA:3.20.130.10 310 490 5.7E-61 T 23-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DLM_2933 88a0026e5f03d48a95e2c3540204fcc0 508 Pfam PF05681 Fumarate hydratase (Fumerase) 11 288 1.4E-100 T 23-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DLM_2933 88a0026e5f03d48a95e2c3540204fcc0 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 286 1.8E-62 T 23-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DLM_2933 88a0026e5f03d48a95e2c3540204fcc0 508 Pfam PF05683 Fumarase C-terminus 292 491 1.8E-81 T 23-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DLM_3163 42cd57778209eb8382df097db58ccee3 157 PIRSF PIRSF003174 1 157 1.1E-66 T 23-10-2018 IPR010292 Uncharacterised protein family CreA DLM_3163 42cd57778209eb8382df097db58ccee3 157 Pfam PF05981 CreA protein 25 151 6.9E-55 T 23-10-2018 IPR010292 Uncharacterised protein family CreA DLM_0447 97080ca960100ade2b75f619ec909329 251 Gene3D G3DSA:3.40.190.10 34 242 2.0E-21 T 23-10-2018 DLM_0447 97080ca960100ade2b75f619ec909329 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 243 8.4E-16 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_0447 97080ca960100ade2b75f619ec909329 251 SUPERFAMILY SSF53850 20 244 5.1E-25 T 23-10-2018 DLM_0447 97080ca960100ade2b75f619ec909329 251 Gene3D G3DSA:3.40.190.10 108 207 2.0E-21 T 23-10-2018 DLM_4408 29b509c12fb355e85dbdd3e6c53d9784 95 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 2 95 1.4E-33 T 23-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4408 29b509c12fb355e85dbdd3e6c53d9784 95 Gene3D G3DSA:3.30.420.100 1 95 9.6E-38 T 23-10-2018 DLM_4408 29b509c12fb355e85dbdd3e6c53d9784 95 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 1 95 20.666 T 23-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4408 29b509c12fb355e85dbdd3e6c53d9784 95 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 95 2.0E-36 T 23-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4408 29b509c12fb355e85dbdd3e6c53d9784 95 SUPERFAMILY SSF53137 3 93 3.05E-44 T 23-10-2018 DLM_3110 87486d0a5b97812454ae5589f92c07a5 172 Pfam PF00583 Acetyltransferase (GNAT) family 58 138 9.1E-14 T 23-10-2018 IPR000182 GNAT domain DLM_3110 87486d0a5b97812454ae5589f92c07a5 172 SUPERFAMILY SSF55729 4 164 1.08E-35 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3110 87486d0a5b97812454ae5589f92c07a5 172 Gene3D G3DSA:3.40.630.30 2 165 6.4E-40 T 23-10-2018 DLM_1010 693df7c5448149c31663336e01e3fe77 392 ProSitePatterns PS00216 Sugar transport proteins signature 1. 265 282 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_1010 693df7c5448149c31663336e01e3fe77 392 Gene3D G3DSA:1.20.1250.20 2 189 1.3E-20 T 23-10-2018 DLM_1010 693df7c5448149c31663336e01e3fe77 392 Gene3D G3DSA:1.20.1250.20 210 389 5.0E-17 T 23-10-2018 DLM_1010 693df7c5448149c31663336e01e3fe77 392 Pfam PF07690 Major Facilitator Superfamily 14 252 7.2E-23 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1010 693df7c5448149c31663336e01e3fe77 392 Pfam PF07690 Major Facilitator Superfamily 257 380 3.2E-10 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1010 693df7c5448149c31663336e01e3fe77 392 SUPERFAMILY SSF103473 7 383 3.53E-44 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1898 fc241f89803ed67458d248763dcae077 434 Pfam PF07804 HipA-like C-terminal domain 201 374 2.6E-15 T 23-10-2018 IPR012893 HipA-like, C-terminal DLM_1898 fc241f89803ed67458d248763dcae077 434 Pfam PF01022 Bacterial regulatory protein, arsR family 11 42 9.7E-5 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_3075 3145b8ff05f12ef446ceb5273573766d 275 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 18 268 4.6E-90 T 23-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DLM_3075 3145b8ff05f12ef446ceb5273573766d 275 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 272 44.446 T 23-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DLM_3075 3145b8ff05f12ef446ceb5273573766d 275 SUPERFAMILY SSF53335 7 270 7.45E-58 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3075 3145b8ff05f12ef446ceb5273573766d 275 Gene3D G3DSA:1.10.8.10 2 80 1.4E-18 T 23-10-2018 DLM_3075 3145b8ff05f12ef446ceb5273573766d 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DLM_3075 3145b8ff05f12ef446ceb5273573766d 275 Gene3D G3DSA:3.40.50.150 81 273 2.8E-61 T 23-10-2018 DLM_3075 3145b8ff05f12ef446ceb5273573766d 275 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 272 4.6E-76 T 23-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DLM_3075 3145b8ff05f12ef446ceb5273573766d 275 Pfam PF05175 Methyltransferase small domain 106 190 6.2E-18 T 23-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DLM_0566 f523d3aa76e8201665355d9d6c4c6682 364 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 347 75.056 T 23-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DLM_0566 f523d3aa76e8201665355d9d6c4c6682 364 PIRSF PIRSF006004 1 361 2.6E-155 T 23-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DLM_0566 f523d3aa76e8201665355d9d6c4c6682 364 Gene3D G3DSA:3.20.20.70 64 332 8.4E-111 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0566 f523d3aa76e8201665355d9d6c4c6682 364 Pfam PF04055 Radical SAM superfamily 106 277 2.7E-19 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_0566 f523d3aa76e8201665355d9d6c4c6682 364 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 1 351 2.1E-146 T 23-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DLM_0566 f523d3aa76e8201665355d9d6c4c6682 364 Gene3D G3DSA:1.10.150.530 2 63 1.5E-25 T 23-10-2018 DLM_0566 f523d3aa76e8201665355d9d6c4c6682 364 SUPERFAMILY SSF102114 102 324 1.57E-17 T 23-10-2018 DLM_0540 5e459ef24dd02057766fe32d87d763ef 130 Gene3D G3DSA:3.30.429.10 1 129 5.1E-40 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily DLM_0540 5e459ef24dd02057766fe32d87d763ef 130 Pfam PF14552 Tautomerase enzyme 38 119 1.3E-27 T 23-10-2018 IPR037479 Tautomerase, MSAD family DLM_0540 5e459ef24dd02057766fe32d87d763ef 130 SUPERFAMILY SSF55331 2 122 2.27E-32 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily DLM_3678 1d320e7aa7e34d643f8b0ccc751d3fb0 111 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 1 110 1.3E-29 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 DLM_3678 1d320e7aa7e34d643f8b0ccc751d3fb0 111 Gene3D G3DSA:3.40.1350.10 7 111 2.4E-31 T 23-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DLM_3678 1d320e7aa7e34d643f8b0ccc751d3fb0 111 Pfam PF02021 Uncharacterised protein family UPF0102 8 95 4.0E-26 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 DLM_3678 1d320e7aa7e34d643f8b0ccc751d3fb0 111 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 110 22.036 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 DLM_3678 1d320e7aa7e34d643f8b0ccc751d3fb0 111 SUPERFAMILY SSF52980 1 110 1.93E-21 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DLM_3877 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Pfam PF00665 Integrase core domain 103 217 5.4E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_3877 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Pfam PF13276 HTH-like domain 23 75 7.0E-15 T 23-10-2018 IPR025948 HTH-like domain DLM_3877 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Gene3D G3DSA:3.30.420.10 101 263 7.8E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_3877 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 SUPERFAMILY SSF53098 96 261 2.28E-41 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0868 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Pfam PF00665 Integrase core domain 103 217 5.4E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_0868 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Pfam PF13276 HTH-like domain 23 75 7.0E-15 T 23-10-2018 IPR025948 HTH-like domain DLM_0868 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Gene3D G3DSA:3.30.420.10 101 263 7.8E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0868 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 SUPERFAMILY SSF53098 96 261 2.28E-41 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_2637 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Pfam PF00665 Integrase core domain 103 217 5.4E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_2637 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Pfam PF13276 HTH-like domain 23 75 7.0E-15 T 23-10-2018 IPR025948 HTH-like domain DLM_2637 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Gene3D G3DSA:3.30.420.10 101 263 7.8E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_2637 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 SUPERFAMILY SSF53098 96 261 2.28E-41 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1615 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Pfam PF00665 Integrase core domain 103 217 5.4E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_1615 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Pfam PF13276 HTH-like domain 23 75 7.0E-15 T 23-10-2018 IPR025948 HTH-like domain DLM_1615 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 Gene3D G3DSA:3.30.420.10 101 263 7.8E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1615 a7d5d43b685273f77f2f2fbe7f6f0dd1 270 SUPERFAMILY SSF53098 96 261 2.28E-41 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_3579 6d365e9c4ab267e5aea18818b94be308 381 Gene3D G3DSA:2.40.30.170 221 344 2.1E-36 T 23-10-2018 DLM_3579 6d365e9c4ab267e5aea18818b94be308 381 Gene3D G3DSA:2.40.50.100 51 85 2.8E-10 T 23-10-2018 DLM_3579 6d365e9c4ab267e5aea18818b94be308 381 SUPERFAMILY SSF111369 49 173 1.83E-5 T 23-10-2018 DLM_3579 6d365e9c4ab267e5aea18818b94be308 381 Gene3D G3DSA:1.10.287.470 86 177 2.8E-10 T 23-10-2018 DLM_3579 6d365e9c4ab267e5aea18818b94be308 381 Pfam PF13437 HlyD family secretion protein 209 329 1.3E-16 T 23-10-2018 DLM_3579 6d365e9c4ab267e5aea18818b94be308 381 SUPERFAMILY SSF111369 173 260 6.67E-10 T 23-10-2018 DLM_3436 203faaa5dc1a7123ad92551aadb5bfcf 451 SUPERFAMILY SSF53720 3 450 2.49E-136 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_3436 203faaa5dc1a7123ad92551aadb5bfcf 451 Gene3D G3DSA:3.40.605.10 4 442 1.9E-141 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_3436 203faaa5dc1a7123ad92551aadb5bfcf 451 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 252 263 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_3436 203faaa5dc1a7123ad92551aadb5bfcf 451 Pfam PF00171 Aldehyde dehydrogenase family 4 447 4.3E-129 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_3436 203faaa5dc1a7123ad92551aadb5bfcf 451 Gene3D G3DSA:3.40.309.10 230 419 1.9E-141 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_2825 76f7373b62bb6652ed05ee74b60b0f12 119 Gene3D G3DSA:3.30.780.10 39 119 3.0E-29 T 23-10-2018 DLM_2825 76f7373b62bb6652ed05ee74b60b0f12 119 PIRSF PIRSF037511 1 119 1.8E-38 T 23-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 DLM_2825 76f7373b62bb6652ed05ee74b60b0f12 119 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 10 119 1.1E-35 T 23-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 DLM_2825 76f7373b62bb6652ed05ee74b60b0f12 119 SUPERFAMILY SSF55159 9 116 3.01E-28 T 23-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 DLM_2825 76f7373b62bb6652ed05ee74b60b0f12 119 Pfam PF01253 Translation initiation factor SUI1 43 112 1.4E-14 T 23-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 DLM_1101 3eef21a964401a75f09d16e16ab93b5f 102 SUPERFAMILY SSF52833 5 101 2.01E-26 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_1101 3eef21a964401a75f09d16e16ab93b5f 102 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 89 8.5E-8 T 23-10-2018 DLM_1101 3eef21a964401a75f09d16e16ab93b5f 102 Gene3D G3DSA:3.40.30.10 5 102 1.2E-30 T 23-10-2018 DLM_0837 43fe00dee331e35b07e97ff026e19e17 594 Pfam PF06472 ABC transporter transmembrane region 2 36 323 8.5E-75 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DLM_0837 43fe00dee331e35b07e97ff026e19e17 594 SUPERFAMILY SSF90123 62 371 6.93E-19 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_0837 43fe00dee331e35b07e97ff026e19e17 594 Gene3D G3DSA:3.40.50.300 385 594 9.1E-38 T 23-10-2018 DLM_0837 43fe00dee331e35b07e97ff026e19e17 594 Gene3D G3DSA:1.20.1560.10 50 376 2.1E-10 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_0837 43fe00dee331e35b07e97ff026e19e17 594 SMART SM00382 416 588 8.7E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0837 43fe00dee331e35b07e97ff026e19e17 594 SUPERFAMILY SSF52540 386 589 2.17E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0837 43fe00dee331e35b07e97ff026e19e17 594 ProSitePatterns PS00211 ABC transporters family signature. 513 527 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0837 43fe00dee331e35b07e97ff026e19e17 594 Pfam PF00005 ABC transporter 407 540 5.6E-18 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3994 90bd1029ec4153dbabed94cbec0219be 272 Pfam PF01435 Peptidase family M48 75 257 2.2E-35 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DLM_3994 90bd1029ec4153dbabed94cbec0219be 272 Gene3D G3DSA:3.30.2010.10 65 161 3.3E-6 T 23-10-2018 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 SMART SM00938 4 105 1.4E-65 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 Gene3D G3DSA:3.30.70.120 1 112 5.0E-45 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 PRINTS PR00340 P-II protein signature 52 75 2.2E-43 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 PRINTS PR00340 P-II protein signature 23 41 2.2E-43 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 PRINTS PR00340 P-II protein signature 83 103 2.2E-43 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 PRINTS PR00340 P-II protein signature 2 17 2.2E-43 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 PIRSF PIRSF039144 1 112 4.5E-54 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 SUPERFAMILY SSF54913 1 112 6.67E-45 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DLM_0068 7d0bc1e57c8596fedfb617e1404b4735 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.7E-43 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DLM_1109 180109dc8b2c6c14dc6b83c33b2d3788 652 Gene3D G3DSA:3.40.640.10 141 423 2.0E-100 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1109 180109dc8b2c6c14dc6b83c33b2d3788 652 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 619 1.9E-8 T 23-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DLM_1109 180109dc8b2c6c14dc6b83c33b2d3788 652 Gene3D G3DSA:3.90.100.10 533 642 4.5E-14 T 23-10-2018 DLM_1109 180109dc8b2c6c14dc6b83c33b2d3788 652 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 141 516 7.9E-104 T 23-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DLM_1109 180109dc8b2c6c14dc6b83c33b2d3788 652 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 23-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DLM_1109 180109dc8b2c6c14dc6b83c33b2d3788 652 SUPERFAMILY SSF53383 141 530 1.61E-92 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 Gene3D G3DSA:3.90.700.10 240 350 2.9E-157 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 Pfam PF02910 Fumarate reductase flavoprotein C-term 431 511 9.8E-15 T 23-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 Gene3D G3DSA:3.50.50.60 5 396 2.9E-157 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 510 5.0E-195 T 23-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 SUPERFAMILY SSF51905 2 438 5.48E-72 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 SUPERFAMILY SSF56425 230 345 7.63E-44 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 Gene3D G3DSA:1.20.58.100 415 526 4.1E-43 T 23-10-2018 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 SUPERFAMILY SSF46977 416 517 3.53E-32 T 23-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 PIRSF PIRSF000171 1 250 3.9E-20 T 23-10-2018 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 PIRSF PIRSF000171 329 524 8.2E-13 T 23-10-2018 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.9E-7 T 23-10-2018 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 2.9E-7 T 23-10-2018 DLM_0848 33fa9df4d038c29908c47bb71c398ffa 526 Pfam PF00890 FAD binding domain 5 384 1.7E-99 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_2631 3a861749df114dec049cfe81df809944 286 SUPERFAMILY SSF53098 107 266 4.17E-39 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_2631 3a861749df114dec049cfe81df809944 286 Pfam PF13683 Integrase core domain 197 263 1.2E-29 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_2631 3a861749df114dec049cfe81df809944 286 Pfam PF13276 HTH-like domain 45 98 5.5E-11 T 23-10-2018 IPR025948 HTH-like domain DLM_2631 3a861749df114dec049cfe81df809944 286 Gene3D G3DSA:3.30.420.10 107 254 2.8E-19 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0348 615bf76e2beb5c81d3d2129eaa7a1b97 59 Gene3D G3DSA:1.20.1300.10 1 59 7.6E-16 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0348 615bf76e2beb5c81d3d2129eaa7a1b97 59 SUPERFAMILY SSF81343 1 59 1.68E-13 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0348 615bf76e2beb5c81d3d2129eaa7a1b97 59 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 1 56 3.8E-17 T 23-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0348 615bf76e2beb5c81d3d2129eaa7a1b97 59 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 54 4.5E-12 T 23-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_3783 0ddc48f006c6010942d11d7503b0f422 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 9 213 3.4E-49 T 23-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DLM_3783 0ddc48f006c6010942d11d7503b0f422 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 5 214 29.743 T 23-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DLM_3783 0ddc48f006c6010942d11d7503b0f422 214 Gene3D G3DSA:3.40.50.620 4 213 3.7E-61 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3783 0ddc48f006c6010942d11d7503b0f422 214 SUPERFAMILY SSF52374 7 213 6.57E-48 T 23-10-2018 DLM_3783 0ddc48f006c6010942d11d7503b0f422 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 70 4.1E-8 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DLM_3783 0ddc48f006c6010942d11d7503b0f422 214 Pfam PF01467 Cytidylyltransferase-like 9 188 2.8E-29 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DLM_2403 259fb7fc836e6891d288140c3306d316 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.8E-15 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DLM_2403 259fb7fc836e6891d288140c3306d316 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.8E-15 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DLM_2403 259fb7fc836e6891d288140c3306d316 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.8E-15 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DLM_2403 259fb7fc836e6891d288140c3306d316 65 SUPERFAMILY SSF143034 2 64 1.31E-22 T 23-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2403 259fb7fc836e6891d288140c3306d316 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.447 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DLM_2403 259fb7fc836e6891d288140c3306d316 65 Gene3D G3DSA:2.40.50.530 1 65 1.9E-20 T 23-10-2018 DLM_2403 259fb7fc836e6891d288140c3306d316 65 Pfam PF01632 Ribosomal protein L35 2 62 1.5E-23 T 23-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2403 259fb7fc836e6891d288140c3306d316 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.7E-25 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DLM_3424 305ed961eb136ef5b4ee52c6b7a66e4b 293 Gene3D G3DSA:3.90.79.10 116 270 2.7E-61 T 23-10-2018 DLM_3424 305ed961eb136ef5b4ee52c6b7a66e4b 293 ProSitePatterns PS00893 Nudix box signature. 158 179 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_3424 305ed961eb136ef5b4ee52c6b7a66e4b 293 Pfam PF00293 NUDIX domain 133 240 5.9E-11 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_3424 305ed961eb136ef5b4ee52c6b7a66e4b 293 Gene3D G3DSA:3.30.750.160 23 204 2.7E-61 T 23-10-2018 DLM_3424 305ed961eb136ef5b4ee52c6b7a66e4b 293 SUPERFAMILY SSF55811 98 256 2.84E-21 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_3424 305ed961eb136ef5b4ee52c6b7a66e4b 293 Pfam PF15916 Domain of unknown function (DUF4743) 12 117 4.3E-9 T 23-10-2018 IPR031804 Domain of unknown function DUF4743 DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 Pfam PF01938 TRAM domain 377 439 2.5E-13 T 23-10-2018 IPR002792 TRAM domain DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 Pfam PF04055 Radical SAM superfamily 150 324 5.7E-27 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 Gene3D G3DSA:3.80.30.20 144 376 2.2E-82 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 SUPERFAMILY SSF102114 127 374 1.44E-59 T 23-10-2018 DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 440 72.489 T 23-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 2.5E-29 T 23-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 Gene3D G3DSA:3.40.50.12160 2 135 3.0E-33 T 23-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 436 1.4E-145 T 23-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 438 1.9E-172 T 23-10-2018 DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DLM_4427 87fcb7ca355042641a19066dcec4cce2 444 SMART SM00729 146 364 1.2E-55 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_1461 f76785355a3856abfe8707d011cd73a5 369 Gene3D G3DSA:3.90.380.10 17 359 7.4E-42 T 23-10-2018 DLM_1461 f76785355a3856abfe8707d011cd73a5 369 SUPERFAMILY SSF55961 159 365 8.63E-41 T 23-10-2018 DLM_1461 f76785355a3856abfe8707d011cd73a5 369 Gene3D G3DSA:2.102.10.10 37 150 7.4E-42 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_1461 f76785355a3856abfe8707d011cd73a5 369 SUPERFAMILY SSF50022 6 140 4.71E-32 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_1461 f76785355a3856abfe8707d011cd73a5 369 Pfam PF00355 Rieske [2Fe-2S] domain 46 121 6.7E-13 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DLM_1461 f76785355a3856abfe8707d011cd73a5 369 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 163 363 1.4E-37 T 23-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 DLM_4104 a9c487de556b71a12a9ae491c4b84473 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 9.1E-24 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4104 a9c487de556b71a12a9ae491c4b84473 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4104 a9c487de556b71a12a9ae491c4b84473 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 24 1.0E-6 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4104 a9c487de556b71a12a9ae491c4b84473 44 Pfam PF00468 Ribosomal protein L34 1 44 1.3E-23 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4104 a9c487de556b71a12a9ae491c4b84473 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.232 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 SUPERFAMILY SSF81923 1 141 8.24E-59 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 SMART SM01086 657 745 2.0E-32 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Gene3D G3DSA:1.10.1780.10 1 142 1.3E-42 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 23-10-2018 IPR028299 ClpA/B, conserved site 2 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Gene3D G3DSA:3.40.50.300 443 655 1.5E-79 T 23-10-2018 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Gene3D G3DSA:3.40.50.300 171 359 1.2E-68 T 23-10-2018 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 650 1.3E-47 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 62 2.9E-14 T 23-10-2018 IPR004176 Clp, N-terminal DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 346 3.9E-13 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 23-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 1.6E-22 T 23-10-2018 IPR019489 Clp ATPase, C-terminal DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 23-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 SUPERFAMILY SSF52540 441 745 5.62E-78 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Gene3D G3DSA:1.10.8.60 657 757 2.0E-27 T 23-10-2018 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 8.1E-39 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 8.1E-39 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 8.1E-39 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 8.1E-39 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 SUPERFAMILY SSF52540 172 422 6.0E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 SMART SM00382 210 354 7.7E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 SMART SM00382 491 640 2.4E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3305 8b8ebd94746dd56e39b1184c8615e66d 759 Gene3D G3DSA:1.10.8.60 360 442 3.8E-34 T 23-10-2018 DLM_4187 31072e8dfd0adb4fdafceb0cf2d82965 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 45.333 T 23-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DLM_4187 31072e8dfd0adb4fdafceb0cf2d82965 148 SUPERFAMILY SSF89447 1 133 5.23E-40 T 23-10-2018 IPR037914 SpoVT-AbrB domain superfamily DLM_4187 31072e8dfd0adb4fdafceb0cf2d82965 148 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 147 1.7E-36 T 23-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DLM_4187 31072e8dfd0adb4fdafceb0cf2d82965 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 128 1.0E-63 T 23-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DLM_4187 31072e8dfd0adb4fdafceb0cf2d82965 148 Pfam PF02381 MraZ protein, putative antitoxin-like 1 74 2.2E-11 T 23-10-2018 IPR020603 MraZ domain DLM_4187 31072e8dfd0adb4fdafceb0cf2d82965 148 Pfam PF02381 MraZ protein, putative antitoxin-like 77 135 1.6E-15 T 23-10-2018 IPR020603 MraZ domain DLM_4187 31072e8dfd0adb4fdafceb0cf2d82965 148 Gene3D G3DSA:2.40.330.20 1 145 3.3E-38 T 23-10-2018 IPR038619 MraZ superfamily DLM_3701 42a9a3edcde81e8a1732471b2d46a9f1 169 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 70 4.4E-18 T 23-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DLM_3701 42a9a3edcde81e8a1732471b2d46a9f1 169 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 149 15.032 T 23-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DLM_3701 42a9a3edcde81e8a1732471b2d46a9f1 169 Pfam PF02416 mttA/Hcf106 family 4 34 2.6E-8 T 23-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DLM_3701 42a9a3edcde81e8a1732471b2d46a9f1 169 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.6E-14 T 23-10-2018 DLM_3701 42a9a3edcde81e8a1732471b2d46a9f1 169 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.6E-14 T 23-10-2018 DLM_3701 42a9a3edcde81e8a1732471b2d46a9f1 169 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.6E-14 T 23-10-2018 DLM_3701 42a9a3edcde81e8a1732471b2d46a9f1 169 Gene3D G3DSA:1.20.120.20 26 128 2.0E-5 T 23-10-2018 DLM_4167 2f1a5f20cc6cb50bcecf4daf14b825b8 254 SUPERFAMILY SSF53474 2 251 2.43E-50 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4167 2f1a5f20cc6cb50bcecf4daf14b825b8 254 Pfam PF12697 Alpha/beta hydrolase family 14 244 1.8E-19 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_4167 2f1a5f20cc6cb50bcecf4daf14b825b8 254 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 248 2.4E-71 T 23-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 DLM_4167 2f1a5f20cc6cb50bcecf4daf14b825b8 254 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 251 38.126 T 23-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 DLM_4167 2f1a5f20cc6cb50bcecf4daf14b825b8 254 Gene3D G3DSA:3.40.50.1820 1 249 2.6E-60 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 Gene3D G3DSA:3.40.50.720 6 207 7.0E-56 T 23-10-2018 DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 SUPERFAMILY SSF51735 18 205 3.26E-41 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 SUPERFAMILY SSF52096 495 799 2.61E-41 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 21 204 6.6E-42 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 207 306 1.4E-9 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 Gene3D G3DSA:3.90.226.10 491 712 4.1E-32 T 23-10-2018 DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 Pfam PF00378 Enoyl-CoA hydratase/isomerase 501 634 9.2E-18 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 Gene3D G3DSA:1.10.1040.10 208 320 3.0E-15 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 SUPERFAMILY SSF48179 357 471 5.02E-16 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_1063 6e2a494545b3da9a3cb7d5e06bace20e 802 SUPERFAMILY SSF48179 205 323 2.38E-19 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_1899 5fba0f39985d4b555866afcc9525787f 258 Pfam PF00557 Metallopeptidase family M24 52 207 6.1E-15 T 23-10-2018 IPR000994 Peptidase M24 DLM_1899 5fba0f39985d4b555866afcc9525787f 258 SUPERFAMILY SSF55920 50 253 2.75E-24 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like DLM_1899 5fba0f39985d4b555866afcc9525787f 258 Gene3D G3DSA:3.90.230.10 48 220 3.9E-15 T 23-10-2018 DLM_2235 63b04ae26d867da032d3d01b9709d4b4 80 Pfam PF00364 Biotin-requiring enzyme 6 77 1.3E-14 T 23-10-2018 IPR000089 Biotin/lipoyl attachment DLM_2235 63b04ae26d867da032d3d01b9709d4b4 80 SUPERFAMILY SSF51230 4 77 1.7E-18 T 23-10-2018 IPR011053 Single hybrid motif DLM_2235 63b04ae26d867da032d3d01b9709d4b4 80 Gene3D G3DSA:2.40.50.100 1 78 4.3E-20 T 23-10-2018 DLM_2235 63b04ae26d867da032d3d01b9709d4b4 80 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 25 39 4.1E-8 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DLM_2235 63b04ae26d867da032d3d01b9709d4b4 80 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 40 53 4.1E-8 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DLM_2235 63b04ae26d867da032d3d01b9709d4b4 80 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 8 21 4.1E-8 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DLM_1167 794cd31661658611685fcc33f7fccaef 494 Pfam PF11336 Protein of unknown function (DUF3138) 1 494 2.5E-212 T 23-10-2018 IPR021485 Protein of unknown function DUF3138 DLM_2838 801ce39b3a80bc1b270d3969782ab18f 512 Gene3D G3DSA:3.30.1330.60 379 508 6.6E-33 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_2838 801ce39b3a80bc1b270d3969782ab18f 512 PRINTS PR01021 OMPA domain signature 449 465 3.1E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_2838 801ce39b3a80bc1b270d3969782ab18f 512 PRINTS PR01021 OMPA domain signature 434 449 3.1E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_2838 801ce39b3a80bc1b270d3969782ab18f 512 PRINTS PR01021 OMPA domain signature 404 426 3.1E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_2838 801ce39b3a80bc1b270d3969782ab18f 512 SUPERFAMILY SSF103088 390 505 1.31E-31 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_2838 801ce39b3a80bc1b270d3969782ab18f 512 Pfam PF00691 OmpA family 403 499 2.5E-17 T 23-10-2018 IPR006665 OmpA-like domain DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Pfam PF00679 Elongation factor G C-terminus 399 484 3.7E-21 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 309.23 T 23-10-2018 IPR006297 Elongation factor 4 GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.4E-9 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.3E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.3E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.3E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.3E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.3E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 SUPERFAMILY SSF54980 294 370 6.83E-18 T 23-10-2018 IPR035647 EF-G domain III/V-like DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 5.1E-51 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Gene3D G3DSA:3.30.70.3380 368 478 9.6E-43 T 23-10-2018 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 7.0E-18 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 SUPERFAMILY SSF54980 399 493 1.53E-25 T 23-10-2018 IPR035647 EF-G domain III/V-like DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Gene3D G3DSA:3.30.70.870 286 367 1.1E-35 T 23-10-2018 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 SUPERFAMILY SSF50447 166 288 5.3E-30 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Gene3D G3DSA:2.40.30.10 186 285 1.2E-35 T 23-10-2018 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Gene3D G3DSA:3.40.50.300 1 185 6.0E-69 T 23-10-2018 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 3.1E-301 T 23-10-2018 IPR006297 Elongation factor 4 GO:0005525 DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Gene3D G3DSA:3.30.70.2570 479 553 2.4E-33 T 23-10-2018 IPR038363 LepA, C-terminal domain superfamily DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 2.6E-49 T 23-10-2018 IPR013842 GTP-binding protein LepA, C-terminal DLM_1442 f31fefb6c1dedaa7d37621e2c1cb1b0b 597 SUPERFAMILY SSF52540 2 205 3.73E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1574 e9f24ce94cccc19746faf7c7562f707e 273 Gene3D G3DSA:1.10.10.10 87 271 4.3E-12 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1574 e9f24ce94cccc19746faf7c7562f707e 273 ProSitePatterns PS00622 LuxR-type HTH domain signature. 219 246 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1574 e9f24ce94cccc19746faf7c7562f707e 273 Pfam PF00196 Bacterial regulatory proteins, luxR family 204 257 9.6E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1574 e9f24ce94cccc19746faf7c7562f707e 273 SUPERFAMILY SSF46894 189 261 2.21E-13 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_1574 e9f24ce94cccc19746faf7c7562f707e 273 SMART SM00421 202 259 2.0E-9 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 SUPERFAMILY SSF103025 5 278 4.4E-90 T 23-10-2018 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 254 1.3E-81 T 23-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DLM_2877 ded364f7c9743b307193aaee48740e8a 362 SUPERFAMILY SSF101790 270 358 1.13E-25 T 23-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DLM_2877 ded364f7c9743b307193aaee48740e8a 362 Gene3D G3DSA:3.30.70.1400 53 139 4.8E-78 T 23-10-2018 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 Gene3D G3DSA:2.40.30.110 279 362 9.2E-29 T 23-10-2018 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 356 42.75 T 23-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 Gene3D G3DSA:3.30.1360.120 8 231 4.8E-78 T 23-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 356 2.5E-127 T 23-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 PIRSF PIRSF006487 1 361 1.5E-82 T 23-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 351 1.6E-20 T 23-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DLM_2877 ded364f7c9743b307193aaee48740e8a 362 Gene3D G3DSA:4.10.1250.10 232 275 4.7E-27 T 23-10-2018 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 250 266 4.8E-55 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 275 290 4.8E-55 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 196 215 4.8E-55 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 127 141 4.8E-55 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 305 324 4.8E-55 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 158 177 4.8E-55 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 Gene3D G3DSA:3.20.20.70 1 334 5.5E-138 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 SMART SM01004 8 331 1.4E-230 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 250 262 - T 23-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 PIRSF PIRSF001415 1 334 2.2E-146 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 SUPERFAMILY SSF51569 5 332 4.69E-139 T 23-10-2018 DLM_3021 3301137cf78df25482b27a9c40e6247a 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 329 2.5E-135 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DLM_0193 eb8d92e43dbc4d3105e90d14af8169a7 466 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 355 366 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0193 eb8d92e43dbc4d3105e90d14af8169a7 466 SUPERFAMILY SSF54862 284 389 3.39E-16 T 23-10-2018 DLM_0193 eb8d92e43dbc4d3105e90d14af8169a7 466 Pfam PF13183 4Fe-4S dicluster domain 304 369 2.5E-11 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_0193 eb8d92e43dbc4d3105e90d14af8169a7 466 SUPERFAMILY SSF100950 63 288 1.38E-32 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_0193 eb8d92e43dbc4d3105e90d14af8169a7 466 Gene3D G3DSA:3.40.50.10420 133 271 1.9E-9 T 23-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DLM_0193 eb8d92e43dbc4d3105e90d14af8169a7 466 Pfam PF02589 LUD domain 68 274 1.8E-45 T 23-10-2018 IPR003741 LUD domain DLM_0193 eb8d92e43dbc4d3105e90d14af8169a7 466 Gene3D G3DSA:1.10.1060.10 282 388 7.8E-10 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_0193 eb8d92e43dbc4d3105e90d14af8169a7 466 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 306 317 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_1384 52f8e24f1a520f4d3a9a7756966a4b59 488 SUPERFAMILY SSF51905 33 364 1.3E-27 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1384 52f8e24f1a520f4d3a9a7756966a4b59 488 Pfam PF13450 NAD(P)-binding Rossmann-like domain 47 75 9.4E-5 T 23-10-2018 DLM_1384 52f8e24f1a520f4d3a9a7756966a4b59 488 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 124 284 5.9E-15 T 23-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase DLM_1384 52f8e24f1a520f4d3a9a7756966a4b59 488 Gene3D G3DSA:3.50.50.60 33 388 2.2E-41 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1384 52f8e24f1a520f4d3a9a7756966a4b59 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 194 1.4E-7 T 23-10-2018 DLM_1384 52f8e24f1a520f4d3a9a7756966a4b59 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 227 252 1.4E-7 T 23-10-2018 DLM_1384 52f8e24f1a520f4d3a9a7756966a4b59 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 66 1.4E-7 T 23-10-2018 DLM_2007 a79673f13534f276635df518dac9ea33 365 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 147 1.7E-21 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_2007 a79673f13534f276635df518dac9ea33 365 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DLM_2007 a79673f13534f276635df518dac9ea33 365 Pfam PF00107 Zinc-binding dehydrogenase 194 294 1.4E-24 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_2007 a79673f13534f276635df518dac9ea33 365 SUPERFAMILY SSF50129 3 354 9.43E-40 T 23-10-2018 IPR011032 GroES-like superfamily DLM_2007 a79673f13534f276635df518dac9ea33 365 SUPERFAMILY SSF51735 157 329 1.2E-38 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2007 a79673f13534f276635df518dac9ea33 365 Gene3D G3DSA:3.90.180.10 24 348 1.0E-101 T 23-10-2018 DLM_2007 a79673f13534f276635df518dac9ea33 365 SMART SM00829 14 359 1.2E-5 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DLM_2007 a79673f13534f276635df518dac9ea33 365 Gene3D G3DSA:3.40.50.720 172 307 1.0E-101 T 23-10-2018 DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 453 2.7E-184 T 23-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 Pfam PF12804 MobA-like NTP transferase domain 7 169 2.3E-22 T 23-10-2018 IPR025877 MobA-like NTP transferase DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 450 40.984 T 23-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 Gene3D G3DSA:2.160.10.10 226 454 9.3E-65 T 23-10-2018 DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 SUPERFAMILY SSF51161 253 437 4.02E-47 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 Gene3D G3DSA:3.90.550.10 2 225 1.9E-59 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 SUPERFAMILY SSF53448 4 250 1.52E-60 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 298 3.6E-5 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 426 1.1E-4 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_3658 649cbe8573c4d1b51f6f69b66064fb28 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 315 350 3.7E-5 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_1485 792c221c8e31699fa1ebca7b3031f1e4 248 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_1485 792c221c8e31699fa1ebca7b3031f1e4 248 Pfam PF00849 RNA pseudouridylate synthase 11 170 2.2E-33 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_1485 792c221c8e31699fa1ebca7b3031f1e4 248 SUPERFAMILY SSF55120 2 238 1.5E-59 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_1485 792c221c8e31699fa1ebca7b3031f1e4 248 Gene3D G3DSA:3.30.2350.10 3 236 1.1E-57 T 23-10-2018 DLM_2061 f555fd4fee11a5e7853bd00b294f423c 450 SUPERFAMILY SSF51679 5 432 6.8E-125 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_2061 f555fd4fee11a5e7853bd00b294f423c 450 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 11 427 9.6E-150 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DLM_2061 f555fd4fee11a5e7853bd00b294f423c 450 Pfam PF00296 Luciferase-like monooxygenase 20 383 8.3E-57 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DLM_2061 f555fd4fee11a5e7853bd00b294f423c 450 Gene3D G3DSA:3.20.20.30 3 446 1.3E-152 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_2061 f555fd4fee11a5e7853bd00b294f423c 450 PIRSF PIRSF000337 4 442 3.4E-130 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 SUPERFAMILY SSF48179 172 279 5.1E-29 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 SUPERFAMILY SSF51735 1 172 3.49E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 1 169 1.4E-53 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 Gene3D G3DSA:3.40.50.720 1 175 1.8E-57 T 23-10-2018 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 173 270 7.9E-25 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 405 479 1.3E-12 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 Gene3D G3DSA:3.30.750.190 276 398 2.8E-84 T 23-10-2018 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 SUPERFAMILY SSF48179 404 481 2.04E-15 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 Gene3D G3DSA:1.10.1040.50 176 481 2.8E-84 T 23-10-2018 DLM_3563 fe056764f4bafecf34a9c9fbb6d63cad 492 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 170 194 - T 23-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 SMART SM00493 3 103 1.9E-28 T 23-10-2018 IPR006171 TOPRIM domain DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Gene3D G3DSA:2.70.20.10 188 464 1.5E-170 T 23-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 SMART SM00437 249 517 5.1E-118 T 23-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Gene3D G3DSA:3.40.50.140 1 138 3.1E-47 T 23-10-2018 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 583 617 2.6E-13 T 23-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 637 673 2.6E-15 T 23-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 679 717 4.9E-13 T 23-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 SMART SM00436 108 196 3.0E-50 T 23-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Pfam PF01751 Toprim domain 5 117 1.3E-24 T 23-10-2018 IPR006171 TOPRIM domain DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Gene3D G3DSA:1.10.290.10 257 392 1.5E-170 T 23-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Pfam PF01131 DNA topoisomerase 133 555 2.2E-133 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 617 1.1E-242 T 23-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 299 308 1.4E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 377 393 1.4E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.4E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 480 494 1.4E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 1.4E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Gene3D G3DSA:3.30.65.10 623 677 1.4E-7 T 23-10-2018 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Gene3D G3DSA:3.30.65.10 570 622 1.5E-6 T 23-10-2018 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 286 308 - T 23-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Gene3D G3DSA:1.10.460.10 139 557 1.5E-170 T 23-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 704 55.434 T 23-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 SUPERFAMILY SSF56712 4 594 5.23E-196 T 23-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 SUPERFAMILY SSF57783 581 620 5.1E-11 T 23-10-2018 DLM_4306 14c762e3be9ad0bceb61a059313661c1 765 SUPERFAMILY SSF57783 623 672 1.87E-12 T 23-10-2018 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 PRINTS PR01466 Bacterial arginine deiminase signature 365 379 3.4E-47 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 3.4E-47 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 PRINTS PR01466 Bacterial arginine deiminase signature 345 362 3.4E-47 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 PRINTS PR01466 Bacterial arginine deiminase signature 150 168 3.4E-47 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 PRINTS PR01466 Bacterial arginine deiminase signature 388 406 3.4E-47 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 PRINTS PR01466 Bacterial arginine deiminase signature 178 193 3.4E-47 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 Gene3D G3DSA:1.10.3930.10 69 149 2.6E-148 T 23-10-2018 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 PIRSF PIRSF006356 1 409 8.8E-132 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 Pfam PF02274 Amidinotransferase 19 406 2.4E-105 T 23-10-2018 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 SUPERFAMILY SSF55909 4 409 2.68E-134 T 23-10-2018 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 Gene3D G3DSA:3.75.10.10 7 406 2.6E-148 T 23-10-2018 DLM_2881 27a32a6c7e6d3ae3a0da51f2db475a32 411 Hamap MF_00242 Arginine deiminase [arcA]. 2 409 47.462 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0310 92bd8a5c053855b4b039c86bc6758ca5 189 TIGRFAM TIGR01841 phasin: phasin family protein 27 109 6.5E-16 T 23-10-2018 IPR010127 Phasin, subfamily 1 DLM_0310 92bd8a5c053855b4b039c86bc6758ca5 189 Pfam PF09361 Phasin protein 6 104 2.2E-24 T 23-10-2018 IPR018968 Phasin DLM_3263 bab6906c14f356a73bbd0f8e3c804317 429 Gene3D G3DSA:1.20.1250.20 10 429 7.5E-70 T 23-10-2018 DLM_3263 bab6906c14f356a73bbd0f8e3c804317 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 293 308 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_3263 bab6906c14f356a73bbd0f8e3c804317 429 SUPERFAMILY SSF103473 10 426 1.7E-70 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3263 bab6906c14f356a73bbd0f8e3c804317 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_3263 bab6906c14f356a73bbd0f8e3c804317 429 Pfam PF07690 Major Facilitator Superfamily 19 350 9.7E-34 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 SUPERFAMILY SSF50249 1 66 2.36E-25 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 Gene3D G3DSA:2.40.50.140 1 65 2.1E-30 T 23-10-2018 DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 PIRSF PIRSF002599 1 67 6.7E-24 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 PRINTS PR00050 Cold shock protein signature 40 58 4.5E-17 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 PRINTS PR00050 Cold shock protein signature 4 19 4.5E-17 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 PRINTS PR00050 Cold shock protein signature 25 34 4.5E-17 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-10-2018 IPR019844 Cold-shock conserved site DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 SMART SM00357 3 67 5.3E-31 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 DLM_2255 f9a1bbcb36b1fc9feadeac98ebe6a73f 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.4E-30 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_1797 0077f8cb741e04ff357291cd59f24ee6 443 Gene3D G3DSA:3.10.450.350 182 418 3.0E-77 T 23-10-2018 DLM_1797 0077f8cb741e04ff357291cd59f24ee6 443 Pfam PF01551 Peptidase family M23 303 399 6.7E-32 T 23-10-2018 IPR016047 Peptidase M23 DLM_1797 0077f8cb741e04ff357291cd59f24ee6 443 Gene3D G3DSA:3.10.450.350 64 162 3.2E-26 T 23-10-2018 DLM_1797 0077f8cb741e04ff357291cd59f24ee6 443 Gene3D G3DSA:2.70.70.10 275 405 3.0E-77 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_1797 0077f8cb741e04ff357291cd59f24ee6 443 SUPERFAMILY SSF51261 183 401 5.75E-59 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 Pfam PF00210 Ferritin-like domain 8 143 2.4E-32 T 23-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 SUPERFAMILY SSF47240 1 156 1.4E-42 T 23-10-2018 IPR009078 Ferritin-like superfamily DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 PRINTS PR00601 Bacterioferritin signature 108 128 3.9E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 PRINTS PR00601 Bacterioferritin signature 129 150 3.9E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 PRINTS PR00601 Bacterioferritin signature 65 85 3.9E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 PRINTS PR00601 Bacterioferritin signature 23 43 3.9E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 PRINTS PR00601 Bacterioferritin signature 3 22 3.9E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 PRINTS PR00601 Bacterioferritin signature 44 64 3.9E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 PIRSF PIRSF002560 1 157 1.2E-61 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 1.7E-67 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3420 885f9ee6f4f1be15e4b1d0d688396dcf 157 Gene3D G3DSA:1.20.1260.10 1 157 2.6E-58 T 23-10-2018 IPR012347 Ferritin-like DLM_1224 ca2868be647d942fef6aa184477162d0 317 SUPERFAMILY SSF46785 8 115 5.95E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1224 ca2868be647d942fef6aa184477162d0 317 Gene3D G3DSA:1.10.10.10 6 92 3.2E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1224 ca2868be647d942fef6aa184477162d0 317 Pfam PF03466 LysR substrate binding domain 92 299 5.5E-37 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1224 ca2868be647d942fef6aa184477162d0 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 65 1.2E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1224 ca2868be647d942fef6aa184477162d0 317 Gene3D G3DSA:3.40.190.290 94 298 2.3E-50 T 23-10-2018 DLM_1224 ca2868be647d942fef6aa184477162d0 317 SUPERFAMILY SSF53850 93 303 1.72E-37 T 23-10-2018 DLM_1224 ca2868be647d942fef6aa184477162d0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.3E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1224 ca2868be647d942fef6aa184477162d0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.3E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1224 ca2868be647d942fef6aa184477162d0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.3E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2798 a0fcb7a151957549078776301db2e001 246 Gene3D G3DSA:2.40.400.10 14 246 3.2E-88 T 23-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 DLM_2798 a0fcb7a151957549078776301db2e001 246 Pfam PF06314 Acetoacetate decarboxylase (ADC) 13 245 9.2E-77 T 23-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 DLM_2798 a0fcb7a151957549078776301db2e001 246 SUPERFAMILY SSF160104 1 245 1.19E-85 T 23-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 DLM_2798 a0fcb7a151957549078776301db2e001 246 Hamap MF_00597 Probable acetoacetate decarboxylase [adc]. 7 246 57.096 T 23-10-2018 IPR023653 Acetoacetate decarboxylase, bacterial GO:0016831 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 DLM_0964 f1c73d5b6d5bf7b425b328896ac5751d 332 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 13 315 51.113 T 23-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 DLM_0964 f1c73d5b6d5bf7b425b328896ac5751d 332 PIRSF PIRSF029038 3 325 3.5E-136 T 23-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 DLM_0964 f1c73d5b6d5bf7b425b328896ac5751d 332 Pfam PF05971 Protein of unknown function (DUF890) 15 313 7.1E-117 T 23-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 DLM_0964 f1c73d5b6d5bf7b425b328896ac5751d 332 Gene3D G3DSA:3.40.50.150 46 313 9.2E-74 T 23-10-2018 DLM_0964 f1c73d5b6d5bf7b425b328896ac5751d 332 SUPERFAMILY SSF53335 51 312 9.29E-28 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1297 d10372a7802d7c1d12264df6ac11e08c 202 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 1 180 2.3E-10 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_1297 d10372a7802d7c1d12264df6ac11e08c 202 Gene3D G3DSA:1.10.1020.10 6 84 6.0E-6 T 23-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DLM_1297 d10372a7802d7c1d12264df6ac11e08c 202 SUPERFAMILY SSF53335 1 201 2.85E-41 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1297 d10372a7802d7c1d12264df6ac11e08c 202 Gene3D G3DSA:3.40.50.150 85 202 7.8E-10 T 23-10-2018 DLM_2136 88017daed236f154c03181935f681a51 279 Pfam PF01261 Xylose isomerase-like TIM barrel 25 221 4.7E-12 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DLM_2136 88017daed236f154c03181935f681a51 279 SUPERFAMILY SSF51658 3 269 1.04E-54 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_2136 88017daed236f154c03181935f681a51 279 Gene3D G3DSA:3.20.20.150 2 272 5.4E-47 T 23-10-2018 DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 Pfam PF12840 Helix-turn-helix domain 17 76 1.9E-9 T 23-10-2018 DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 SMART SM00450 122 209 8.4E-19 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 ProSitePatterns PS00380 Rhodanese signature 1. 147 158 - T 23-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 SUPERFAMILY SSF52821 112 209 1.44E-27 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 2.6E-7 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 2.6E-7 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 2.6E-7 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 Pfam PF00581 Rhodanese-like domain 124 209 6.7E-15 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 SMART SM00418 18 96 3.6E-19 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 Gene3D G3DSA:3.40.250.10 109 209 1.8E-25 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 SUPERFAMILY SSF46785 13 151 1.53E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4286 9686d66bfc758d0a5a4e814f792bd817 209 Gene3D G3DSA:1.10.10.10 7 107 5.6E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1451 74d0d64f105744e28d8710d17eb99922 360 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 10 346 51.422 T 23-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 DLM_1451 74d0d64f105744e28d8710d17eb99922 360 Gene3D G3DSA:3.20.20.300 2 346 3.2E-119 T 23-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DLM_1451 74d0d64f105744e28d8710d17eb99922 360 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 297 2.7E-75 T 23-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DLM_1451 74d0d64f105744e28d8710d17eb99922 360 SUPERFAMILY SSF51445 10 297 5.58E-87 T 23-10-2018 IPR017853 Glycoside hydrolase superfamily DLM_1451 74d0d64f105744e28d8710d17eb99922 360 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 243 260 - T 23-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 DLM_4531 a5b10896ff0a4463619dc86b79f3f2aa 70 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 67 1.5E-30 T 23-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor DLM_4531 a5b10896ff0a4463619dc86b79f3f2aa 70 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 70 1.0E-25 T 23-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Gene3D G3DSA:1.10.268.10 354 477 5.6E-229 T 23-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 SUPERFAMILY SSF101904 517 857 6.28E-105 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 SMART SM00434 1 483 5.9E-289 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 1 845 0.0 T 23-10-2018 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Gene3D G3DSA:2.120.10.90 515 845 4.1E-119 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 16 490 8.2E-156 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Gene3D G3DSA:3.90.199.10 17 505 5.6E-229 T 23-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 522 569 2.5E-11 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 747 783 3.7E-10 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 695 742 5.8E-13 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 692 2.8E-8 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 572 621 3.2E-11 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 798 844 2.3E-15 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 SUPERFAMILY SSF56719 14 505 3.27E-180 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Gene3D G3DSA:3.30.1360.40 220 317 5.6E-229 T 23-10-2018 DLM_1823 a2ddea3d72bdb1c5ab889b95426089f8 881 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 846 24.066 T 23-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Pfam PF00990 Diguanylate cyclase, GGDEF domain 511 676 4.8E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SUPERFAMILY SSF141868 695 938 9.02E-90 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SMART SM00267 500 680 2.5E-55 T 23-10-2018 IPR000160 GGDEF domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SMART SM00091 381 449 0.011 T 23-10-2018 IPR000014 PAS domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SMART SM00091 255 321 8.8E-7 T 23-10-2018 IPR000014 PAS domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Gene3D G3DSA:3.30.70.270 506 692 1.5E-57 T 23-10-2018 DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Pfam PF00563 EAL domain 696 931 2.9E-76 T 23-10-2018 IPR001633 EAL domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SMART SM00052 690 936 3.3E-117 T 23-10-2018 IPR001633 EAL domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SUPERFAMILY SSF55785 366 498 6.46E-21 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SMART SM00086 458 500 3.4E-6 T 23-10-2018 IPR001610 PAC motif DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SMART SM00086 327 369 3.4E-7 T 23-10-2018 IPR001610 PAC motif DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 36 116 4.6E-13 T 23-10-2018 IPR029095 NarX-like, N-terminal DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Gene3D G3DSA:3.30.450.20 249 390 5.8E-41 T 23-10-2018 DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SUPERFAMILY SSF55785 263 366 2.79E-28 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 377 506 8.2E-13 T 23-10-2018 IPR000014 PAS domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 375 2.4E-23 T 23-10-2018 IPR000014 PAS domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 679 1.8E-40 T 23-10-2018 IPR000160 GGDEF domain DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Pfam PF08447 PAS fold 405 486 1.1E-9 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Gene3D G3DSA:3.20.20.450 693 944 1.9E-98 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Gene3D G3DSA:3.30.450.20 391 505 2.1E-18 T 23-10-2018 DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 SUPERFAMILY SSF55073 516 682 1.41E-43 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_1687 0b806085ecfeed2299d401d98cd99e65 945 Pfam PF13426 PAS domain 265 368 1.5E-16 T 23-10-2018 IPR000014 PAS domain DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 SUPERFAMILY SSF51735 9 257 8.08E-67 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 2.0E-84 T 23-10-2018 DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 Gene3D G3DSA:3.40.50.720 5 258 2.9E-56 T 23-10-2018 DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 PIRSF PIRSF000094 5 258 2.3E-95 T 23-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 7.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 7.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 7.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 7.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3185 dabcc5249b704c70eff4a15dca3f286f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 7.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3443 ee390017271b00f0c062a1091c375ebe 621 SUPERFAMILY SSF103190 86 170 1.41E-11 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_3443 ee390017271b00f0c062a1091c375ebe 621 SUPERFAMILY SSF58104 312 621 5.23E-69 T 23-10-2018 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 Pfam PF02743 Cache domain 61 250 1.5E-27 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 Gene3D G3DSA:1.10.287.950 292 621 4.8E-69 T 23-10-2018 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 Gene3D G3DSA:3.30.450.20 50 264 1.1E-47 T 23-10-2018 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 Gene3D G3DSA:3.30.450.20 60 163 1.1E-47 T 23-10-2018 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 SMART SM00283 352 620 1.1E-62 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 586 2.3E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 Pfam PF00672 HAMP domain 291 339 2.2E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 SMART SM00304 379 439 64.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3443 ee390017271b00f0c062a1091c375ebe 621 SMART SM00304 290 344 2.1E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 Gene3D G3DSA:3.40.50.720 2 248 2.6E-64 T 23-10-2018 DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 Pfam PF00106 short chain dehydrogenase 5 186 4.1E-52 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 SUPERFAMILY SSF51735 4 232 2.6E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 176 0.0045 T 23-10-2018 DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.0E-26 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.0E-26 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.0E-26 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.0E-26 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0523 25866ac8fdfc3bc6f941c24f2d0253fb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.0E-26 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2111 7441eeb3ab4f35d3651c898c3f1d0874 133 SUPERFAMILY SSF47413 11 80 2.88E-7 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_2111 7441eeb3ab4f35d3651c898c3f1d0874 133 Gene3D G3DSA:1.10.260.40 1 76 1.6E-7 T 23-10-2018 DLM_2111 7441eeb3ab4f35d3651c898c3f1d0874 133 Pfam PF13560 Helix-turn-helix domain 15 67 2.5E-6 T 23-10-2018 DLM_0766 7441eeb3ab4f35d3651c898c3f1d0874 133 SUPERFAMILY SSF47413 11 80 2.88E-7 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_0766 7441eeb3ab4f35d3651c898c3f1d0874 133 Gene3D G3DSA:1.10.260.40 1 76 1.6E-7 T 23-10-2018 DLM_0766 7441eeb3ab4f35d3651c898c3f1d0874 133 Pfam PF13560 Helix-turn-helix domain 15 67 2.5E-6 T 23-10-2018 DLM_3692 28c28568f8d5bfacbb1544ef89177d0a 505 Gene3D G3DSA:1.20.1600.10 29 433 4.1E-82 T 23-10-2018 DLM_3692 28c28568f8d5bfacbb1544ef89177d0a 505 Pfam PF02321 Outer membrane efflux protein 31 218 2.3E-25 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_3692 28c28568f8d5bfacbb1544ef89177d0a 505 Pfam PF02321 Outer membrane efflux protein 240 416 2.1E-27 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_3692 28c28568f8d5bfacbb1544ef89177d0a 505 SUPERFAMILY SSF56954 30 427 3.66E-81 T 23-10-2018 DLM_3692 28c28568f8d5bfacbb1544ef89177d0a 505 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 29 428 1.3E-87 T 23-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 DLM_3237 91cc1270f922318943b93ef93bad7b9d 297 SUPERFAMILY SSF53850 28 258 7.72E-13 T 23-10-2018 DLM_3237 91cc1270f922318943b93ef93bad7b9d 297 Gene3D G3DSA:3.40.190.10 85 254 1.1E-5 T 23-10-2018 DLM_3237 91cc1270f922318943b93ef93bad7b9d 297 Gene3D G3DSA:3.40.190.10 121 220 1.1E-5 T 23-10-2018 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 Hamap MF_00109 Shikimate kinase [aroK]. 8 174 30.108 T 23-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 Pfam PF01202 Shikimate kinase 17 173 5.2E-54 T 23-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 PRINTS PR01100 Shikimate kinase family signature 102 119 1.3E-25 T 23-10-2018 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 PRINTS PR01100 Shikimate kinase family signature 81 90 1.3E-25 T 23-10-2018 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 PRINTS PR01100 Shikimate kinase family signature 11 26 1.3E-25 T 23-10-2018 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 PRINTS PR01100 Shikimate kinase family signature 63 71 1.3E-25 T 23-10-2018 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 PRINTS PR01100 Shikimate kinase family signature 35 48 1.3E-25 T 23-10-2018 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 ProSitePatterns PS01128 Shikimate kinase signature. 64 89 - T 23-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 SUPERFAMILY SSF52540 11 172 1.26E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3534 a4887685bca0d7f2d5c2d183e9d34e5f 180 Gene3D G3DSA:3.40.50.300 4 176 2.9E-55 T 23-10-2018 DLM_3496 7e85bea6ebb3bec298233aecc802d634 255 Gene3D G3DSA:3.40.50.300 1 254 4.2E-80 T 23-10-2018 DLM_3496 7e85bea6ebb3bec298233aecc802d634 255 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3496 7e85bea6ebb3bec298233aecc802d634 255 Pfam PF00005 ABC transporter 19 179 7.7E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3496 7e85bea6ebb3bec298233aecc802d634 255 SUPERFAMILY SSF52540 4 249 1.5E-73 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3496 7e85bea6ebb3bec298233aecc802d634 255 PIRSF PIRSF039085 1 255 2.5E-120 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DLM_3496 7e85bea6ebb3bec298233aecc802d634 255 SMART SM00382 28 227 7.4E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4279 ad3da0bc6c678be9405b29c0990cc0c7 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 154 1.1E-64 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DLM_4279 ad3da0bc6c678be9405b29c0990cc0c7 162 Gene3D G3DSA:3.40.50.7700 1 162 4.8E-72 T 23-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DLM_4279 ad3da0bc6c678be9405b29c0990cc0c7 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 32.259 T 23-10-2018 IPR033747 Class I PurE DLM_4279 ad3da0bc6c678be9405b29c0990cc0c7 162 Pfam PF00731 AIR carboxylase 3 151 5.4E-64 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DLM_4279 ad3da0bc6c678be9405b29c0990cc0c7 162 SUPERFAMILY SSF52255 4 157 1.57E-65 T 23-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DLM_4279 ad3da0bc6c678be9405b29c0990cc0c7 162 PIRSF PIRSF001338 1 158 2.3E-65 T 23-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 DLM_4279 ad3da0bc6c678be9405b29c0990cc0c7 162 SMART SM01001 2 153 4.9E-101 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Gene3D G3DSA:3.30.565.10 372 556 1.3E-55 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0211 2a968ab700914e754a0261b686edb8a2 722 SUPERFAMILY SSF50341 556 684 2.75E-29 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Pfam PF01584 CheW-like domain 562 687 9.5E-27 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 SUPERFAMILY SSF47226 4 126 1.26E-28 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 SMART SM00260 549 685 1.7E-34 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Gene3D G3DSA:2.40.50.180 580 640 4.6E-33 T 23-10-2018 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Pfam PF01627 Hpt domain 6 105 2.1E-15 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Gene3D G3DSA:2.30.30.40 557 681 4.6E-33 T 23-10-2018 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 556 6.0E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 312 346 1.9E-6 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 SUPERFAMILY SSF55874 373 555 5.63E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Gene3D G3DSA:1.20.120.160 1 139 4.1E-34 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 SMART SM00387 416 557 1.2E-26 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0211 2a968ab700914e754a0261b686edb8a2 722 SMART SM01231 311 371 6.3E-12 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 SMART SM00073 3 100 6.1E-23 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 Gene3D G3DSA:1.10.287.560 311 371 3.0E-7 T 23-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 SUPERFAMILY SSF47384 312 372 2.82E-10 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 2.7E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 2.7E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 2.7E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_0211 2a968ab700914e754a0261b686edb8a2 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 2.7E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3035 c136d0c114e3431fb4292c4614a75c46 264 SUPERFAMILY SSF52540 3 229 1.28E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3035 c136d0c114e3431fb4292c4614a75c46 264 SMART SM00382 31 226 9.4E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3035 c136d0c114e3431fb4292c4614a75c46 264 Pfam PF00005 ABC transporter 22 177 2.3E-26 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3035 c136d0c114e3431fb4292c4614a75c46 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3035 c136d0c114e3431fb4292c4614a75c46 264 Gene3D G3DSA:3.40.50.300 1 255 1.7E-56 T 23-10-2018 DLM_2191 077af3517f4635656dc3287a88dc7db9 86 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.8E-24 T 23-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DLM_2191 077af3517f4635656dc3287a88dc7db9 86 Gene3D G3DSA:2.40.50.140 1 71 9.2E-33 T 23-10-2018 DLM_2191 077af3517f4635656dc3287a88dc7db9 86 SUPERFAMILY SSF50249 1 71 2.45E-25 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2191 077af3517f4635656dc3287a88dc7db9 86 SMART SM00316 4 72 0.0034 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2191 077af3517f4635656dc3287a88dc7db9 86 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 75 25.789 T 23-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DLM_2191 077af3517f4635656dc3287a88dc7db9 86 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.1E-31 T 23-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DLM_3802 749f1d2b53ff65f0cfd799d89e6270a0 103 SUPERFAMILY SSF102829 6 96 8.37E-19 T 23-10-2018 IPR036192 Cell division protein ZapA-like superfamily DLM_3802 749f1d2b53ff65f0cfd799d89e6270a0 103 Gene3D G3DSA:1.20.5.50 49 101 1.4E-10 T 23-10-2018 DLM_3802 749f1d2b53ff65f0cfd799d89e6270a0 103 Pfam PF05164 Cell division protein ZapA 7 89 1.2E-16 T 23-10-2018 IPR007838 Cell division protein ZapA-like DLM_3802 749f1d2b53ff65f0cfd799d89e6270a0 103 Gene3D G3DSA:1.10.20.30 1 48 1.0E-9 T 23-10-2018 DLM_4070 bc6ce42299cb04a73c9a5739cd2430b1 436 Gene3D G3DSA:3.40.50.1100 104 226 3.6E-163 T 23-10-2018 DLM_4070 bc6ce42299cb04a73c9a5739cd2430b1 436 SUPERFAMILY SSF53686 80 422 9.88E-48 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DLM_4070 bc6ce42299cb04a73c9a5739cd2430b1 436 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 82 382 7.4E-45 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DLM_4070 bc6ce42299cb04a73c9a5739cd2430b1 436 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 9 427 3.9E-151 T 23-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 DLM_4070 bc6ce42299cb04a73c9a5739cd2430b1 436 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 436 194.674 T 23-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 DLM_4070 bc6ce42299cb04a73c9a5739cd2430b1 436 Gene3D G3DSA:3.40.50.1100 20 427 3.6E-163 T 23-10-2018 DLM_1029 1658515c4a2183eada4d664cd7bdc22f 231 SUPERFAMILY SSF46894 132 229 2.3E-25 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_1029 1658515c4a2183eada4d664cd7bdc22f 231 Pfam PF00072 Response regulator receiver domain 9 116 3.8E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1029 1658515c4a2183eada4d664cd7bdc22f 231 Gene3D G3DSA:1.10.10.10 128 231 1.1E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1029 1658515c4a2183eada4d664cd7bdc22f 231 SUPERFAMILY SSF52172 5 125 2.85E-35 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1029 1658515c4a2183eada4d664cd7bdc22f 231 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-32 T 23-10-2018 DLM_1029 1658515c4a2183eada4d664cd7bdc22f 231 SMART SM00862 152 228 5.9E-22 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_1029 1658515c4a2183eada4d664cd7bdc22f 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 9.6E-22 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_1029 1658515c4a2183eada4d664cd7bdc22f 231 SMART SM00448 6 116 4.1E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3016 6efffc9f3cc9e634ffa9b2fb0405d774 321 SUPERFAMILY SSF53474 35 313 6.76E-64 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3016 6efffc9f3cc9e634ffa9b2fb0405d774 321 Pfam PF07859 alpha/beta hydrolase fold 87 293 4.3E-68 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DLM_3016 6efffc9f3cc9e634ffa9b2fb0405d774 321 Gene3D G3DSA:3.40.50.1820 3 318 3.8E-80 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3016 6efffc9f3cc9e634ffa9b2fb0405d774 321 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 23-10-2018 IPR033140 Lipase, GDXG, putative serine active site DLM_0864 6e0595bbad33fa048fbb88b30e917b89 304 SUPERFAMILY SSF103481 209 300 2.88E-10 T 23-10-2018 DLM_0864 6e0595bbad33fa048fbb88b30e917b89 304 Pfam PF00892 EamA-like transporter family 28 155 5.9E-18 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_0864 6e0595bbad33fa048fbb88b30e917b89 304 Pfam PF00892 EamA-like transporter family 174 301 6.7E-16 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_0864 6e0595bbad33fa048fbb88b30e917b89 304 SUPERFAMILY SSF103481 56 158 1.06E-13 T 23-10-2018 DLM_1745 e91fa384d63e3b9fcd862a28410816e0 1142 Gene3D G3DSA:3.40.50.300 875 1137 1.8E-24 T 23-10-2018 DLM_1745 e91fa384d63e3b9fcd862a28410816e0 1142 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1025 1098 1.2E-14 T 23-10-2018 DLM_1745 e91fa384d63e3b9fcd862a28410816e0 1142 SUPERFAMILY SSF52540 1 1127 3.72E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1745 e91fa384d63e3b9fcd862a28410816e0 1142 Gene3D G3DSA:3.40.50.300 1 285 9.5E-50 T 23-10-2018 DLM_1745 e91fa384d63e3b9fcd862a28410816e0 1142 Pfam PF13476 AAA domain 5 279 2.6E-26 T 23-10-2018 IPR038729 Rad50/SbcC-type AAA domain DLM_1517 aa2c1ad645f5fc41c78f2aa92d9be55e 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 216 3.5E-21 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1517 aa2c1ad645f5fc41c78f2aa92d9be55e 217 SUPERFAMILY SSF161098 7 201 4.58E-44 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1517 aa2c1ad645f5fc41c78f2aa92d9be55e 217 Gene3D G3DSA:1.10.3720.10 3 216 5.2E-52 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2174 578558c9ca9ef03de4b6c26f71ff3dfd 121 Pfam PF04234 CopC domain 25 119 3.7E-21 T 23-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 DLM_2174 578558c9ca9ef03de4b6c26f71ff3dfd 121 Gene3D G3DSA:2.60.40.1220 24 120 1.4E-27 T 23-10-2018 DLM_2174 578558c9ca9ef03de4b6c26f71ff3dfd 121 SUPERFAMILY SSF81296 24 119 1.89E-25 T 23-10-2018 IPR014756 Immunoglobulin E-set DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 230 8.2E-25 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 Gene3D G3DSA:1.10.1020.10 57 151 4.0E-45 T 23-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 SUPERFAMILY SSF53335 5 253 1.2E-62 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 Gene3D G3DSA:3.40.50.150 7 224 4.0E-45 T 23-10-2018 DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 PIRSF PIRSF000398 1 253 4.6E-49 T 23-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 171 183 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2089 b7ab5298dcb1167d94b08a4369518616 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_2926 5dfa9bb6bb9eddced82f7a24992e911f 382 SUPERFAMILY SSF52172 5 142 1.29E-39 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2926 5dfa9bb6bb9eddced82f7a24992e911f 382 SMART SM00448 5 118 1.0E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2926 5dfa9bb6bb9eddced82f7a24992e911f 382 Gene3D G3DSA:3.40.50.2300 2 149 2.5E-36 T 23-10-2018 DLM_2926 5dfa9bb6bb9eddced82f7a24992e911f 382 SUPERFAMILY SSF81606 181 380 2.09E-7 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_2926 5dfa9bb6bb9eddced82f7a24992e911f 382 Gene3D G3DSA:3.60.40.10 158 382 2.2E-33 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_2926 5dfa9bb6bb9eddced82f7a24992e911f 382 SMART SM00331 165 381 4.1E-12 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_2926 5dfa9bb6bb9eddced82f7a24992e911f 382 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 196 381 2.0E-31 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_2926 5dfa9bb6bb9eddced82f7a24992e911f 382 Pfam PF00072 Response regulator receiver domain 7 118 1.3E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3807 946518c1b49b0f5e00433128e16066f1 253 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 253 42.668 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DLM_3807 946518c1b49b0f5e00433128e16066f1 253 Pfam PF02654 Cobalamin-5-phosphate synthase 19 244 1.1E-51 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DLM_3807 946518c1b49b0f5e00433128e16066f1 253 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 19 244 6.0E-34 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DLM_0052 673735314180734293e7dd4d38e52918 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 23-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0052 673735314180734293e7dd4d38e52918 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.589 T 23-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0052 673735314180734293e7dd4d38e52918 417 Gene3D G3DSA:1.10.645.20 4 417 1.4E-178 T 23-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0052 673735314180734293e7dd4d38e52918 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 1.5E-126 T 23-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0052 673735314180734293e7dd4d38e52918 417 SUPERFAMILY SSF56762 16 417 1.03E-140 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0052 673735314180734293e7dd4d38e52918 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 1.6E-190 T 23-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3255 5729bdf793c6b5ffa4e1e8c5aadfe416 368 SUPERFAMILY SSF52402 60 187 1.47E-17 T 23-10-2018 DLM_3255 5729bdf793c6b5ffa4e1e8c5aadfe416 368 Pfam PF01012 Electron transfer flavoprotein domain 61 180 5.7E-18 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_3255 5729bdf793c6b5ffa4e1e8c5aadfe416 368 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 243 321 1.9E-25 T 23-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DLM_3255 5729bdf793c6b5ffa4e1e8c5aadfe416 368 SMART SM00893 60 236 9.5E-4 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_3255 5729bdf793c6b5ffa4e1e8c5aadfe416 368 PIRSF PIRSF000089 57 364 7.6E-72 T 23-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DLM_3255 5729bdf793c6b5ffa4e1e8c5aadfe416 368 Gene3D G3DSA:3.40.50.1220 237 368 2.0E-38 T 23-10-2018 DLM_3255 5729bdf793c6b5ffa4e1e8c5aadfe416 368 Gene3D G3DSA:3.40.50.620 55 216 1.4E-17 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3255 5729bdf793c6b5ffa4e1e8c5aadfe416 368 SUPERFAMILY SSF52467 243 356 4.36E-33 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DLM_2490 dd27b86de47f9affc1158ebec64be2e1 335 Gene3D G3DSA:1.10.10.10 29 113 9.3E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2490 dd27b86de47f9affc1158ebec64be2e1 335 SUPERFAMILY SSF53850 116 325 2.53E-34 T 23-10-2018 DLM_2490 dd27b86de47f9affc1158ebec64be2e1 335 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 32 89 7.3E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2490 dd27b86de47f9affc1158ebec64be2e1 335 SUPERFAMILY SSF46785 30 138 4.32E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2490 dd27b86de47f9affc1158ebec64be2e1 335 Pfam PF03466 LysR substrate binding domain 115 322 3.6E-33 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2490 dd27b86de47f9affc1158ebec64be2e1 335 Gene3D G3DSA:3.40.190.290 118 321 4.5E-46 T 23-10-2018 DLM_4178 0c8fe1f9b17a5da0b47e38b801f4cb6c 366 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 364 2.5E-124 T 23-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4178 0c8fe1f9b17a5da0b47e38b801f4cb6c 366 Pfam PF01098 Cell cycle protein 23 363 2.0E-102 T 23-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4178 0c8fe1f9b17a5da0b47e38b801f4cb6c 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 323 347 - T 23-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4178 0c8fe1f9b17a5da0b47e38b801f4cb6c 366 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 366 26.205 T 23-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_3623 ac95bdfd3945ede4b7d476fc5a017f56 529 SMART SM00304 328 380 0.0029 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3623 ac95bdfd3945ede4b7d476fc5a017f56 529 Pfam PF08447 PAS fold 31 112 7.0E-14 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_3623 ac95bdfd3945ede4b7d476fc5a017f56 529 SUPERFAMILY SSF158472 328 376 3.01E-6 T 23-10-2018 DLM_3623 ac95bdfd3945ede4b7d476fc5a017f56 529 SUPERFAMILY SSF55785 18 114 9.42E-27 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3623 ac95bdfd3945ede4b7d476fc5a017f56 529 SMART SM00086 80 121 0.0028 T 23-10-2018 IPR001610 PAC motif DLM_3623 ac95bdfd3945ede4b7d476fc5a017f56 529 Gene3D G3DSA:1.20.1480.50 284 384 6.4E-9 T 23-10-2018 DLM_3623 ac95bdfd3945ede4b7d476fc5a017f56 529 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 115 6.9E-16 T 23-10-2018 IPR000014 PAS domain DLM_3623 ac95bdfd3945ede4b7d476fc5a017f56 529 Gene3D G3DSA:3.30.450.20 9 145 8.4E-26 T 23-10-2018 DLM_3376 00e0487002b3efedb8ed559c170daeb5 383 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 3 381 1.0E-149 T 23-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase DLM_3376 00e0487002b3efedb8ed559c170daeb5 383 Gene3D G3DSA:3.40.640.10 1 255 4.0E-95 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3376 00e0487002b3efedb8ed559c170daeb5 383 Gene3D G3DSA:3.90.1150.10 256 383 1.2E-37 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3376 00e0487002b3efedb8ed559c170daeb5 383 SUPERFAMILY SSF53383 3 382 3.7E-114 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3376 00e0487002b3efedb8ed559c170daeb5 383 PIRSF PIRSF000390 1 383 1.7E-112 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_3376 00e0487002b3efedb8ed559c170daeb5 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 378 7.8E-118 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DLM_2178 e2e84802ffc86af50081fac19422f829 200 Pfam PF01965 DJ-1/PfpI family 2 160 2.2E-11 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DLM_2178 e2e84802ffc86af50081fac19422f829 200 Gene3D G3DSA:3.40.50.880 2 198 3.3E-36 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2178 e2e84802ffc86af50081fac19422f829 200 SUPERFAMILY SSF52317 1 175 1.03E-27 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2636 7c8eecb5fd458b668c0aa0ad512b84ca 68 Pfam PF05593 RHS Repeat 35 67 2.4E-7 T 23-10-2018 IPR031325 RHS repeat DLM_2636 7c8eecb5fd458b668c0aa0ad512b84ca 68 Pfam PF05593 RHS Repeat 12 46 3.2E-7 T 23-10-2018 IPR031325 RHS repeat DLM_2636 7c8eecb5fd458b668c0aa0ad512b84ca 68 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 35 66 2.5E-5 T 23-10-2018 IPR006530 YD repeat DLM_2636 7c8eecb5fd458b668c0aa0ad512b84ca 68 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 28 50 2.7E-4 T 23-10-2018 IPR006530 YD repeat DLM_2636 7c8eecb5fd458b668c0aa0ad512b84ca 68 Gene3D G3DSA:3.90.930.1 2 67 3.0E-5 T 23-10-2018 DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.5E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 Gene3D G3DSA:3.40.190.10 91 282 2.5E-14 T 23-10-2018 DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 Gene3D G3DSA:3.40.190.10 170 275 2.5E-14 T 23-10-2018 DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 SUPERFAMILY SSF46785 1 86 8.89E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 SUPERFAMILY SSF53850 89 301 7.06E-24 T 23-10-2018 DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 Pfam PF03466 LysR substrate binding domain 89 299 2.0E-25 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_4462 ce60124ca8f853d165f56cd4ff714629 303 Gene3D G3DSA:1.10.10.10 1 88 4.6E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0023 1b3dc156fe1cf5adcf7a845c54244750 238 Pfam PF00072 Response regulator receiver domain 5 113 1.3E-21 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0023 1b3dc156fe1cf5adcf7a845c54244750 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.8E-21 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_0023 1b3dc156fe1cf5adcf7a845c54244750 238 SUPERFAMILY SSF52172 3 189 1.93E-32 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0023 1b3dc156fe1cf5adcf7a845c54244750 238 Gene3D G3DSA:1.10.10.10 124 237 1.3E-35 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0023 1b3dc156fe1cf5adcf7a845c54244750 238 SMART SM00448 3 113 1.7E-32 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0023 1b3dc156fe1cf5adcf7a845c54244750 238 SMART SM00862 156 232 6.6E-20 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_0023 1b3dc156fe1cf5adcf7a845c54244750 238 Gene3D G3DSA:3.40.50.2300 1 120 2.6E-29 T 23-10-2018 DLM_2275 6d83e328a7d985d21dde74f7c356ecee 308 SUPERFAMILY SSF53850 90 298 5.12E-40 T 23-10-2018 DLM_2275 6d83e328a7d985d21dde74f7c356ecee 308 Gene3D G3DSA:1.10.10.10 2 89 4.5E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2275 6d83e328a7d985d21dde74f7c356ecee 308 Gene3D G3DSA:3.40.190.290 91 293 3.2E-56 T 23-10-2018 DLM_2275 6d83e328a7d985d21dde74f7c356ecee 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.2E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2275 6d83e328a7d985d21dde74f7c356ecee 308 Pfam PF03466 LysR substrate binding domain 88 291 1.8E-37 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2275 6d83e328a7d985d21dde74f7c356ecee 308 SUPERFAMILY SSF46785 2 112 1.06E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2990 1495556b81f6afb037701d41885e2902 88 Pfam PF10048 Predicted integral membrane protein (DUF2282) 32 80 6.0E-21 T 23-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 Pfam PF03466 LysR substrate binding domain 97 301 1.4E-42 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 70 1.5E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.3E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.3E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.3E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 Gene3D G3DSA:3.40.190.10 171 272 5.1E-66 T 23-10-2018 DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 SUPERFAMILY SSF53850 97 303 4.34E-44 T 23-10-2018 DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 Gene3D G3DSA:1.10.10.10 8 92 4.2E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 SUPERFAMILY SSF46785 14 119 1.66E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1918 25cca3ad9e3202e5e61bb8d0f2d516e1 305 Gene3D G3DSA:3.40.190.10 98 298 5.1E-66 T 23-10-2018 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 21 367 9.6E-27 T 23-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 409 9.9E-127 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 SUPERFAMILY SSF50621 242 409 2.03E-55 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 268 1.4E-56 T 23-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01181 Diaminopimelate decarboxylase signature 61 78 4.2E-24 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01181 Diaminopimelate decarboxylase signature 377 399 4.2E-24 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01181 Diaminopimelate decarboxylase signature 150 159 4.2E-24 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01181 Diaminopimelate decarboxylase signature 286 304 4.2E-24 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 75 4.2E-22 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 367 380 4.2E-22 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 4.2E-22 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 258 277 4.2E-22 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 43 61 4.2E-22 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 206 222 - T 23-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 Gene3D G3DSA:2.40.37.10 14 406 1.1E-139 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 43 61 - T 23-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 SUPERFAMILY SSF51419 18 270 1.83E-58 T 23-10-2018 IPR029066 PLP-binding barrel DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 Gene3D G3DSA:3.20.20.10 25 272 1.1E-139 T 23-10-2018 IPR029066 PLP-binding barrel DLM_0144 25c236495957e068ebe3d6a1b7c063bf 411 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 6 410 38.25 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DLM_1825 384cf5226a6855ef9a3c0f7ab20df8cf 542 SUPERFAMILY SSF58104 233 542 2.09E-67 T 23-10-2018 DLM_1825 384cf5226a6855ef9a3c0f7ab20df8cf 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 506 6.7E-42 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1825 384cf5226a6855ef9a3c0f7ab20df8cf 542 SMART SM00283 280 541 1.4E-69 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1825 384cf5226a6855ef9a3c0f7ab20df8cf 542 Pfam PF00672 HAMP domain 213 262 2.3E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1825 384cf5226a6855ef9a3c0f7ab20df8cf 542 SMART SM00304 213 265 6.5E-10 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1825 384cf5226a6855ef9a3c0f7ab20df8cf 542 Gene3D G3DSA:1.10.287.950 213 542 2.5E-70 T 23-10-2018 DLM_1825 384cf5226a6855ef9a3c0f7ab20df8cf 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 1.0E-24 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_1743 1b6184c83b1c467b728bd8bee53631c4 155 SMART SM00155 85 112 3.5E-4 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_1743 1b6184c83b1c467b728bd8bee53631c4 155 Pfam PF13091 PLD-like domain 20 141 2.8E-24 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_1743 1b6184c83b1c467b728bd8bee53631c4 155 SUPERFAMILY SSF56024 10 145 1.5E-32 T 23-10-2018 DLM_1743 1b6184c83b1c467b728bd8bee53631c4 155 Gene3D G3DSA:3.30.870.10 5 153 7.5E-41 T 23-10-2018 DLM_1963 39d6f46f05a5b471286dc1dc535c542e 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 12 384 3.2E-109 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DLM_1963 39d6f46f05a5b471286dc1dc535c542e 394 SUPERFAMILY SSF53756 13 362 3.59E-31 T 23-10-2018 DLM_1963 39d6f46f05a5b471286dc1dc535c542e 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 11 388 38.261 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DLM_1963 39d6f46f05a5b471286dc1dc535c542e 394 Pfam PF02684 Lipid-A-disaccharide synthetase 14 370 7.3E-105 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 SUPERFAMILY SSF47928 3 107 1.57E-26 T 23-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 Gene3D G3DSA:1.10.520.20 2 107 3.5E-31 T 23-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 2.5E-53 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 1.4E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.4E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.4E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.4E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.4E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.564 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3663 1f902f37dcb988fdc483967b9fa6a35b 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 2.9E-44 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3764 33a7816d8ae9eda3331cb22f5e339286 340 Pfam PF01207 Dihydrouridine synthase (Dus) 13 313 4.7E-109 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_3764 33a7816d8ae9eda3331cb22f5e339286 340 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 3.5E-126 T 23-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DLM_3764 33a7816d8ae9eda3331cb22f5e339286 340 SUPERFAMILY SSF51395 10 317 2.2E-90 T 23-10-2018 DLM_3764 33a7816d8ae9eda3331cb22f5e339286 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_3764 33a7816d8ae9eda3331cb22f5e339286 340 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 51.04 T 23-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 DLM_3764 33a7816d8ae9eda3331cb22f5e339286 340 Gene3D G3DSA:3.20.20.70 6 248 2.6E-80 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3764 33a7816d8ae9eda3331cb22f5e339286 340 Gene3D G3DSA:1.10.1200.80 252 329 5.0E-13 T 23-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DLM_3764 33a7816d8ae9eda3331cb22f5e339286 340 PIRSF PIRSF006621 1 328 5.4E-107 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_3463 5188cb2e4fde4c5a3f35cb0894dc7463 678 Pfam PF01432 Peptidase family M3 223 672 3.1E-141 T 23-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DLM_3463 5188cb2e4fde4c5a3f35cb0894dc7463 678 Gene3D G3DSA:1.10.1370.10 141 605 2.1E-253 T 23-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DLM_3463 5188cb2e4fde4c5a3f35cb0894dc7463 678 SUPERFAMILY SSF55486 1 672 3.91E-195 T 23-10-2018 DLM_3463 5188cb2e4fde4c5a3f35cb0894dc7463 678 Gene3D G3DSA:1.10.1370.40 14 670 2.1E-253 T 23-10-2018 DLM_0495 08ccbd321a53b1bc614abd08f10992be 589 Pfam PF07664 Ferrous iron transport protein B C terminus 387 434 4.4E-12 T 23-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 DLM_0495 08ccbd321a53b1bc614abd08f10992be 589 Pfam PF07670 Nucleoside recognition 445 559 4.3E-22 T 23-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DLM_0495 08ccbd321a53b1bc614abd08f10992be 589 Pfam PF07670 Nucleoside recognition 282 375 1.4E-9 T 23-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DLM_0495 08ccbd321a53b1bc614abd08f10992be 589 SUPERFAMILY SSF52540 4 162 2.04E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0495 08ccbd321a53b1bc614abd08f10992be 589 Pfam PF02421 Ferrous iron transport protein B 3 156 1.2E-46 T 23-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 DLM_0495 08ccbd321a53b1bc614abd08f10992be 589 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 211 556 2.3E-101 T 23-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 DLM_0495 08ccbd321a53b1bc614abd08f10992be 589 Gene3D G3DSA:3.40.50.300 1 189 3.7E-41 T 23-10-2018 DLM_0368 84f08f08df5fa33458190e56b674b4b5 225 Pfam PF00849 RNA pseudouridylate synthase 11 153 4.2E-22 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_0368 84f08f08df5fa33458190e56b674b4b5 225 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 211 8.0E-79 T 23-10-2018 IPR006508 Pseudouridine synthase, RluA-like DLM_0368 84f08f08df5fa33458190e56b674b4b5 225 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_0368 84f08f08df5fa33458190e56b674b4b5 225 Gene3D G3DSA:3.30.2350.10 1 196 3.5E-43 T 23-10-2018 DLM_0368 84f08f08df5fa33458190e56b674b4b5 225 SUPERFAMILY SSF55120 3 197 1.3E-44 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_3979 67fbb612ae82f18f3fcd414bb2fcb009 325 Gene3D G3DSA:3.90.25.10 181 318 2.2E-101 T 23-10-2018 DLM_3979 67fbb612ae82f18f3fcd414bb2fcb009 325 SUPERFAMILY SSF51735 1 323 1.96E-99 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3979 67fbb612ae82f18f3fcd414bb2fcb009 325 Gene3D G3DSA:3.40.50.720 4 306 2.2E-101 T 23-10-2018 DLM_3979 67fbb612ae82f18f3fcd414bb2fcb009 325 PRINTS PR01713 Nucleotide sugar epimerase signature 285 302 5.2E-29 T 23-10-2018 DLM_3979 67fbb612ae82f18f3fcd414bb2fcb009 325 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 5.2E-29 T 23-10-2018 DLM_3979 67fbb612ae82f18f3fcd414bb2fcb009 325 PRINTS PR01713 Nucleotide sugar epimerase signature 246 261 5.2E-29 T 23-10-2018 DLM_3979 67fbb612ae82f18f3fcd414bb2fcb009 325 PRINTS PR01713 Nucleotide sugar epimerase signature 30 46 5.2E-29 T 23-10-2018 DLM_3979 67fbb612ae82f18f3fcd414bb2fcb009 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 2.0E-64 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DLM_0424 ad20e0487b1189b4f9c6036522cfe543 435 SUPERFAMILY SSF117916 73 155 5.56E-7 T 23-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DLM_0424 ad20e0487b1189b4f9c6036522cfe543 435 SUPERFAMILY SSF52540 164 397 6.18E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0424 ad20e0487b1189b4f9c6036522cfe543 435 Hamap MF_02040 Iron-sulfur cluster carrier protein. 164 413 37.334 T 23-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein DLM_0424 ad20e0487b1189b4f9c6036522cfe543 435 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 169 412 1.5E-101 T 23-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DLM_0424 ad20e0487b1189b4f9c6036522cfe543 435 Pfam PF01883 Iron-sulfur cluster assembly protein 78 142 1.2E-11 T 23-10-2018 IPR002744 MIP18 family-like DLM_0424 ad20e0487b1189b4f9c6036522cfe543 435 ProSitePatterns PS01215 Mrp family signature. 276 292 - T 23-10-2018 IPR000808 Mrp, conserved site GO:0005524 DLM_0424 ad20e0487b1189b4f9c6036522cfe543 435 Gene3D G3DSA:3.40.50.300 158 411 5.9E-85 T 23-10-2018 DLM_2164 8f96763f115b5de97962e267300f3132 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 63.737 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_2164 8f96763f115b5de97962e267300f3132 147 Pfam PF01220 Dehydroquinase class II 3 140 2.6E-53 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_2164 8f96763f115b5de97962e267300f3132 147 Gene3D G3DSA:3.40.50.9100 1 147 2.7E-59 T 23-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_2164 8f96763f115b5de97962e267300f3132 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 138 2.0E-63 T 23-10-2018 DLM_2164 8f96763f115b5de97962e267300f3132 147 SUPERFAMILY SSF52304 3 142 1.24E-54 T 23-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_2164 8f96763f115b5de97962e267300f3132 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 142 1.8E-53 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_2164 8f96763f115b5de97962e267300f3132 147 PIRSF PIRSF001399 1 147 2.8E-54 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DLM_2139 d8078ca98c835ccca8443c57efc14a73 574 Gene3D G3DSA:3.90.700.10 346 499 1.5E-131 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_2139 d8078ca98c835ccca8443c57efc14a73 574 SUPERFAMILY SSF56425 343 510 1.15E-32 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_2139 d8078ca98c835ccca8443c57efc14a73 574 SUPERFAMILY SSF51905 9 567 6.92E-41 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2139 d8078ca98c835ccca8443c57efc14a73 574 Gene3D G3DSA:3.50.50.60 12 562 1.5E-131 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2139 d8078ca98c835ccca8443c57efc14a73 574 Pfam PF00890 FAD binding domain 13 551 1.2E-103 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_2139 d8078ca98c835ccca8443c57efc14a73 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 4.5E-9 T 23-10-2018 DLM_2139 d8078ca98c835ccca8443c57efc14a73 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 4.5E-9 T 23-10-2018 DLM_0704 983d2ede3979f7d12e25b224fc72c8f3 322 SUPERFAMILY SSF46785 18 129 1.36E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0704 983d2ede3979f7d12e25b224fc72c8f3 322 Pfam PF03466 LysR substrate binding domain 109 315 5.2E-30 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0704 983d2ede3979f7d12e25b224fc72c8f3 322 Gene3D G3DSA:3.40.190.10 184 287 2.1E-33 T 23-10-2018 DLM_0704 983d2ede3979f7d12e25b224fc72c8f3 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 79 5.9E-12 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0704 983d2ede3979f7d12e25b224fc72c8f3 322 Gene3D G3DSA:1.10.10.10 18 106 2.6E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0704 983d2ede3979f7d12e25b224fc72c8f3 322 Gene3D G3DSA:3.40.190.10 111 301 2.1E-33 T 23-10-2018 DLM_0704 983d2ede3979f7d12e25b224fc72c8f3 322 SUPERFAMILY SSF53850 109 314 2.53E-32 T 23-10-2018 DLM_2695 b994b89a73426b7999ea179eedeaef06 143 SUPERFAMILY SSF46689 10 132 6.09E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2695 b994b89a73426b7999ea179eedeaef06 143 Pfam PF08765 Mor transcription activator family 31 138 2.2E-21 T 23-10-2018 IPR014875 Mor transcription activator DLM_0518 95158f6270517b145cd3e959815d73e0 194 SUPERFAMILY SSF51735 1 181 1.67E-29 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0518 95158f6270517b145cd3e959815d73e0 194 Gene3D G3DSA:3.40.50.720 1 194 1.6E-46 T 23-10-2018 DLM_0518 95158f6270517b145cd3e959815d73e0 194 Pfam PF13460 NAD(P)H-binding 8 178 1.1E-38 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_1244 b4ed15fb224e9eaea20e2414dbd1346b 477 Pfam PF14082 Domain of unknown function (DUF4263) 298 458 1.8E-22 T 23-10-2018 IPR025359 Protein of unknown function DUF4263 DLM_1396 93d55e9bade1c6992b77e3d755cf3530 151 SUPERFAMILY SSF50249 1 151 5.14E-38 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_1396 93d55e9bade1c6992b77e3d755cf3530 151 Hamap MF_00984 Single-stranded DNA-binding protein. 1 103 25.043 T 23-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DLM_1396 93d55e9bade1c6992b77e3d755cf3530 151 Gene3D G3DSA:2.40.50.140 1 130 3.4E-30 T 23-10-2018 DLM_1396 93d55e9bade1c6992b77e3d755cf3530 151 PIRSF PIRSF002070 1 146 1.9E-29 T 23-10-2018 DLM_1396 93d55e9bade1c6992b77e3d755cf3530 151 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 151 1.0E-28 T 23-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DLM_1396 93d55e9bade1c6992b77e3d755cf3530 151 Pfam PF00436 Single-strand binding protein family 1 97 5.7E-24 T 23-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DLM_3756 c5e5d9d747cb21d11f1bb1016faa9b54 222 TIGRFAM TIGR02796 tolQ: protein TolQ 5 218 4.2E-87 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DLM_3756 c5e5d9d747cb21d11f1bb1016faa9b54 222 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 206 2.3E-42 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DLM_3756 c5e5d9d747cb21d11f1bb1016faa9b54 222 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 222 41.344 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DLM_1438 16f5e84135ab1534cecae48a0ae45173 157 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 2 74 2.0E-18 T 23-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 DLM_1438 16f5e84135ab1534cecae48a0ae45173 157 SUPERFAMILY SSF89069 1 64 1.83E-12 T 23-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 DLM_1438 16f5e84135ab1534cecae48a0ae45173 157 Gene3D G3DSA:1.10.10.880 1 66 1.6E-17 T 23-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 Gene3D G3DSA:1.10.1040.10 161 290 1.8E-39 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 SUPERFAMILY SSF51735 1 161 2.96E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 SUPERFAMILY SSF48179 162 290 1.81E-37 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 5.2E-45 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 PIRSF PIRSF000103 1 291 8.5E-72 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 23-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 288 1.6E-116 T 23-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 283 4.0E-38 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DLM_3054 6ef3b2abfe7446cf110e3f117f5c0cd5 294 Gene3D G3DSA:3.40.50.720 1 160 1.7E-49 T 23-10-2018 DLM_2766 8e44741175e0c58eb4942d1c5f8f2061 278 Gene3D G3DSA:3.30.950.10 146 275 8.9E-41 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DLM_2766 8e44741175e0c58eb4942d1c5f8f2061 278 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 35 49 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_2766 8e44741175e0c58eb4942d1c5f8f2061 278 SUPERFAMILY SSF53790 27 268 1.7E-76 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_2766 8e44741175e0c58eb4942d1c5f8f2061 278 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 110 143 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_2766 8e44741175e0c58eb4942d1c5f8f2061 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 32 241 6.9E-48 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_2766 8e44741175e0c58eb4942d1c5f8f2061 278 Gene3D G3DSA:3.40.1010.10 29 145 2.6E-44 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_2766 8e44741175e0c58eb4942d1c5f8f2061 278 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 30 265 1.7E-90 T 23-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_3655 9758df16fbbb79a1b7ec33301e5f93cf 553 Gene3D G3DSA:3.40.50.300 345 553 1.3E-38 T 23-10-2018 DLM_3655 9758df16fbbb79a1b7ec33301e5f93cf 553 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3655 9758df16fbbb79a1b7ec33301e5f93cf 553 Pfam PF00005 ABC transporter 377 509 1.1E-16 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3655 9758df16fbbb79a1b7ec33301e5f93cf 553 SUPERFAMILY SSF52540 355 551 2.22E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3655 9758df16fbbb79a1b7ec33301e5f93cf 553 SUPERFAMILY SSF90123 18 337 2.35E-22 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_3655 9758df16fbbb79a1b7ec33301e5f93cf 553 Gene3D G3DSA:1.20.1560.10 1 340 9.3E-11 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_3655 9758df16fbbb79a1b7ec33301e5f93cf 553 Pfam PF06472 ABC transporter transmembrane region 2 3 290 4.5E-59 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 Gene3D G3DSA:1.10.287.130 385 499 7.2E-13 T 23-10-2018 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 655 1.1E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1325 881a05c438edb0546e37eb1d690d9271 666 SMART SM00387 548 658 4.9E-26 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1325 881a05c438edb0546e37eb1d690d9271 666 Pfam PF07696 7TMR-DISM extracellular 2 39 165 8.5E-24 T 23-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 Pfam PF07695 7TM diverse intracellular signalling 179 378 4.3E-23 T 23-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 Pfam PF00512 His Kinase A (phospho-acceptor) domain 438 497 1.1E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 SUPERFAMILY SSF55874 507 657 1.44E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1325 881a05c438edb0546e37eb1d690d9271 666 Gene3D G3DSA:2.60.40.2380 33 171 2.7E-23 T 23-10-2018 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 599 8.8E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 655 8.8E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 636 8.8E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 613 8.8E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 Gene3D G3DSA:3.30.565.10 510 663 7.0E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1325 881a05c438edb0546e37eb1d690d9271 666 SUPERFAMILY SSF47384 428 496 6.67E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1325 881a05c438edb0546e37eb1d690d9271 666 SMART SM00388 437 507 1.1E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0923 8f042d4bb3abbe2a4abd9e797ab96fd0 187 SMART SM00342 101 183 9.9E-28 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0923 8f042d4bb3abbe2a4abd9e797ab96fd0 187 Gene3D G3DSA:1.10.10.60 82 186 5.8E-26 T 23-10-2018 DLM_0923 8f042d4bb3abbe2a4abd9e797ab96fd0 187 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_0923 8f042d4bb3abbe2a4abd9e797ab96fd0 187 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 152 167 4.2E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0923 8f042d4bb3abbe2a4abd9e797ab96fd0 187 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 167 183 4.2E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0923 8f042d4bb3abbe2a4abd9e797ab96fd0 187 Pfam PF12833 Helix-turn-helix domain 107 184 3.9E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0923 8f042d4bb3abbe2a4abd9e797ab96fd0 187 SUPERFAMILY SSF46689 136 185 4.12E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1967 aed64bdf5848a5887b2568766dd688db 162 SMART SM00935 11 161 1.6E-44 T 23-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DLM_1967 aed64bdf5848a5887b2568766dd688db 162 SUPERFAMILY SSF111384 22 160 2.35E-32 T 23-10-2018 DLM_1967 aed64bdf5848a5887b2568766dd688db 162 PIRSF PIRSF002094 1 162 1.7E-48 T 23-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DLM_1967 aed64bdf5848a5887b2568766dd688db 162 Pfam PF03938 Outer membrane protein (OmpH-like) 8 160 1.4E-29 T 23-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DLM_1967 aed64bdf5848a5887b2568766dd688db 162 Gene3D G3DSA:3.30.910.20 22 161 1.4E-34 T 23-10-2018 IPR024930 Skp domain superfamily DLM_1837 86e18e35ea94ab061350f22f21351fc9 352 Gene3D G3DSA:3.40.50.2300 2 141 4.7E-35 T 23-10-2018 DLM_1837 86e18e35ea94ab061350f22f21351fc9 352 Pfam PF01966 HD domain 168 290 1.1E-17 T 23-10-2018 IPR006674 HD domain DLM_1837 86e18e35ea94ab061350f22f21351fc9 352 SMART SM00471 163 300 8.7E-12 T 23-10-2018 IPR003607 HD/PDEase domain DLM_1837 86e18e35ea94ab061350f22f21351fc9 352 SUPERFAMILY SSF52172 7 141 3.56E-37 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1837 86e18e35ea94ab061350f22f21351fc9 352 SUPERFAMILY SSF109604 149 331 1.07E-42 T 23-10-2018 DLM_1837 86e18e35ea94ab061350f22f21351fc9 352 SMART SM00448 8 121 2.1E-37 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1837 86e18e35ea94ab061350f22f21351fc9 352 Pfam PF00072 Response regulator receiver domain 10 121 1.5E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1837 86e18e35ea94ab061350f22f21351fc9 352 Gene3D G3DSA:1.10.3210.10 142 344 3.5E-73 T 23-10-2018 DLM_0812 8c15dc80ee98089afa1f15edc8540174 186 Pfam PF04542 Sigma-70 region 2 11 73 7.4E-12 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DLM_0812 8c15dc80ee98089afa1f15edc8540174 186 Gene3D G3DSA:1.10.1740.10 3 75 1.0E-13 T 23-10-2018 DLM_0812 8c15dc80ee98089afa1f15edc8540174 186 Pfam PF08281 Sigma-70, region 4 122 172 2.6E-8 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DLM_0812 8c15dc80ee98089afa1f15edc8540174 186 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 4 184 1.1E-74 T 23-10-2018 IPR014289 RNA polymerase sigma-24-related DLM_0812 8c15dc80ee98089afa1f15edc8540174 186 SUPERFAMILY SSF88946 8 88 6.67E-16 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DLM_0812 8c15dc80ee98089afa1f15edc8540174 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 175 1.3E-20 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DLM_0812 8c15dc80ee98089afa1f15edc8540174 186 Gene3D G3DSA:1.10.10.10 114 177 5.3E-8 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0812 8c15dc80ee98089afa1f15edc8540174 186 SUPERFAMILY SSF88659 112 176 1.05E-11 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_2744 80904fd5e1e9df9d6a7077911b40b096 603 Pfam PF06276 Ferric iron reductase FhuF-like transporter 421 578 3.3E-42 T 23-10-2018 IPR022770 Ferric iron reductase FhuF domain DLM_2744 80904fd5e1e9df9d6a7077911b40b096 603 Gene3D G3DSA:1.10.274.90 2 138 2.5E-50 T 23-10-2018 DLM_2744 80904fd5e1e9df9d6a7077911b40b096 603 Gene3D G3DSA:1.10.510.40 388 595 6.2E-76 T 23-10-2018 DLM_2744 80904fd5e1e9df9d6a7077911b40b096 603 Pfam PF04183 IucA / IucC family 149 399 1.5E-75 T 23-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 DLM_1666 3e12849d34c6a50f6b2f857735070dfc 142 Pfam PF00892 EamA-like transporter family 4 138 5.4E-24 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_1666 3e12849d34c6a50f6b2f857735070dfc 142 SUPERFAMILY SSF103481 40 141 7.59E-19 T 23-10-2018 DLM_4404 3307cac4b98381bc3b47edce3a6f4efc 179 PIRSF PIRSF002161 1 179 1.4E-65 T 23-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4404 3307cac4b98381bc3b47edce3a6f4efc 179 Pfam PF00281 Ribosomal protein L5 25 80 3.2E-27 T 23-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4404 3307cac4b98381bc3b47edce3a6f4efc 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4404 3307cac4b98381bc3b47edce3a6f4efc 179 Gene3D G3DSA:3.30.1440.10 2 178 2.5E-80 T 23-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4404 3307cac4b98381bc3b47edce3a6f4efc 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.5E-43 T 23-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4404 3307cac4b98381bc3b47edce3a6f4efc 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.115 T 23-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4404 3307cac4b98381bc3b47edce3a6f4efc 179 SUPERFAMILY SSF55282 3 178 1.22E-79 T 23-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_0122 c964664f96ada4e00217c2b20b6c44d8 345 Gene3D G3DSA:3.40.1090.10 1 103 4.3E-9 T 23-10-2018 DLM_0122 c964664f96ada4e00217c2b20b6c44d8 345 Pfam PF01734 Patatin-like phospholipase 10 226 1.1E-11 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DLM_0122 c964664f96ada4e00217c2b20b6c44d8 345 SUPERFAMILY SSF52151 5 331 1.28E-22 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 299 1.3E-48 T 23-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 6 301 4.1E-114 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 145 4.3E-50 T 23-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 SUPERFAMILY SSF53671 4 301 6.02E-103 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 Gene3D G3DSA:3.40.50.1370 135 288 1.4E-112 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 3.2E-28 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 3.2E-28 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 3.2E-28 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 3.2E-28 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 Gene3D G3DSA:3.40.50.1370 13 297 1.4E-112 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 302 76.887 T 23-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 3.1E-29 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 3.1E-29 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 218 228 3.1E-29 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 3.1E-29 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_1110 5116d63508f09f0d12ab08fc3a6a4c8e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 3.1E-29 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DLM_1688 a0c361f8cee6d8321ad9fffe2a2b2f7c 331 PIRSF PIRSF004930 1 325 4.5E-94 T 23-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 DLM_1688 a0c361f8cee6d8321ad9fffe2a2b2f7c 331 Pfam PF01300 Telomere recombination 17 192 2.1E-54 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 DLM_1688 a0c361f8cee6d8321ad9fffe2a2b2f7c 331 Pfam PF03481 Putative GTP-binding controlling metal-binding 194 320 3.0E-16 T 23-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain DLM_1688 a0c361f8cee6d8321ad9fffe2a2b2f7c 331 SUPERFAMILY SSF55821 4 203 1.56E-61 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DLM_1688 a0c361f8cee6d8321ad9fffe2a2b2f7c 331 Gene3D G3DSA:3.90.870.10 1 205 1.1E-77 T 23-10-2018 DLM_1688 a0c361f8cee6d8321ad9fffe2a2b2f7c 331 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 203 4.1E-54 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 DLM_1688 a0c361f8cee6d8321ad9fffe2a2b2f7c 331 Gene3D G3DSA:3.40.50.11030 206 328 2.1E-6 T 23-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily DLM_0177 0a41685017a9d6f398a4fa8497b27c86 237 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 3.1E-80 T 23-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 DLM_0177 0a41685017a9d6f398a4fa8497b27c86 237 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 23-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 DLM_0177 0a41685017a9d6f398a4fa8497b27c86 237 Pfam PF01144 Coenzyme A transferase 8 216 3.8E-78 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DLM_0177 0a41685017a9d6f398a4fa8497b27c86 237 SUPERFAMILY SSF100950 8 231 3.4E-86 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_0177 0a41685017a9d6f398a4fa8497b27c86 237 Gene3D G3DSA:3.40.1080.10 1 227 1.1E-93 T 23-10-2018 DLM_0177 0a41685017a9d6f398a4fa8497b27c86 237 SMART SM00882 5 217 4.2E-89 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DLM_3299 999c096df91a5f6d357bc6e922de430c 745 SUPERFAMILY SSF53659 5 742 0.0 T 23-10-2018 DLM_3299 999c096df91a5f6d357bc6e922de430c 745 Gene3D G3DSA:3.40.718.10 408 665 7.0E-7 T 23-10-2018 DLM_3299 999c096df91a5f6d357bc6e922de430c 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 742 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DLM_3299 999c096df91a5f6d357bc6e922de430c 745 PIRSF PIRSF009407 1 744 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DLM_3299 999c096df91a5f6d357bc6e922de430c 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 SMART SM00100 13 134 2.1E-14 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 Gene3D G3DSA:1.10.10.10 148 228 2.7E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 SUPERFAMILY SSF51206 6 145 2.36E-31 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 7.7E-10 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 7.7E-10 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 Pfam PF00027 Cyclic nucleotide-binding domain 33 115 1.4E-14 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 SUPERFAMILY SSF46785 149 229 4.26E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 Pfam PF13545 Crp-like helix-turn-helix domain 151 225 1.6E-17 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 SMART SM00419 170 218 2.0E-12 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_3281 8b7f03b7f6f6864a0dcf736d2b7097ed 235 Gene3D G3DSA:2.60.120.10 26 147 1.3E-42 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2132 34fd9b59c28790bea81438de6cd12710 200 SUPERFAMILY SSF46689 2 75 2.15E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2132 34fd9b59c28790bea81438de6cd12710 200 Gene3D G3DSA:1.10.357.10 1 200 7.1E-62 T 23-10-2018 DLM_2132 34fd9b59c28790bea81438de6cd12710 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 51 2.3E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2132 34fd9b59c28790bea81438de6cd12710 200 SUPERFAMILY SSF48498 71 196 1.04E-33 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_2132 34fd9b59c28790bea81438de6cd12710 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 5.4E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2132 34fd9b59c28790bea81438de6cd12710 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 5.4E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_0924 540e8e0683fb9d2bf6c6b7c43726eb38 141 SUPERFAMILY SSF49777 3 140 3.01E-47 T 23-10-2018 IPR036610 PEBP-like superfamily DLM_0924 540e8e0683fb9d2bf6c6b7c43726eb38 141 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 7 138 1.3E-43 T 23-10-2018 IPR005247 YbhB/YbcL DLM_0924 540e8e0683fb9d2bf6c6b7c43726eb38 141 Gene3D G3DSA:3.90.280.10 1 141 1.0E-49 T 23-10-2018 IPR036610 PEBP-like superfamily DLM_0924 540e8e0683fb9d2bf6c6b7c43726eb38 141 Pfam PF01161 Phosphatidylethanolamine-binding protein 10 138 5.2E-39 T 23-10-2018 IPR008914 Phosphatidylethanolamine-binding protein DLM_1353 cfe17c76749bc78617eb8c7cfe298ce7 143 Pfam PF02566 OsmC-like protein 40 140 8.7E-15 T 23-10-2018 IPR003718 OsmC/Ohr family DLM_1353 cfe17c76749bc78617eb8c7cfe298ce7 143 Gene3D G3DSA:3.30.300.20 46 143 3.0E-29 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_1353 cfe17c76749bc78617eb8c7cfe298ce7 143 SUPERFAMILY SSF82784 4 142 5.63E-37 T 23-10-2018 IPR036102 OsmC/Ohr superfamily DLM_1353 cfe17c76749bc78617eb8c7cfe298ce7 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 6 142 1.7E-50 T 23-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DLM_1353 cfe17c76749bc78617eb8c7cfe298ce7 143 Gene3D G3DSA:2.20.25.10 2 44 2.1E-14 T 23-10-2018 DLM_0266 7495543bd2e450521d7764dff74cec24 568 Pfam PF01425 Amidase 461 544 6.0E-6 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_0266 7495543bd2e450521d7764dff74cec24 568 Pfam PF01425 Amidase 25 247 2.6E-42 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_0266 7495543bd2e450521d7764dff74cec24 568 SUPERFAMILY SSF75304 1 561 1.7E-84 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_0266 7495543bd2e450521d7764dff74cec24 568 Gene3D G3DSA:3.90.1300.10 1 564 7.1E-99 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.7E-93 T 23-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 Gene3D G3DSA:3.30.300.20 17 107 5.7E-29 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 Gene3D G3DSA:3.30.1140.32 108 208 4.8E-43 T 23-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 Pfam PF07650 KH domain 38 111 7.9E-20 T 23-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 SMART SM00322 60 125 3.6E-9 T 23-10-2018 IPR004087 K Homology domain GO:0003676 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.1E-40 T 23-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 SUPERFAMILY SSF54814 2 106 2.41E-37 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 SUPERFAMILY SSF54821 108 206 4.71E-39 T 23-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4397 530cdb93f8cc8c2728da345f68cc99f3 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.618 T 23-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DLM_1509 e91197aaa4e4e6940ace95610ebb26fc 312 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 14 301 1.2E-31 T 23-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DLM_1509 e91197aaa4e4e6940ace95610ebb26fc 312 Gene3D G3DSA:3.30.1780.10 10 302 1.1E-64 T 23-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 DLM_1509 e91197aaa4e4e6940ace95610ebb26fc 312 SUPERFAMILY SSF51735 7 304 1.24E-67 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1509 e91197aaa4e4e6940ace95610ebb26fc 312 Gene3D G3DSA:3.40.50.720 127 288 1.1E-64 T 23-10-2018 DLM_1509 e91197aaa4e4e6940ace95610ebb26fc 312 PIRSF PIRSF001439 3 310 2.1E-52 T 23-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DLM_1855 a37122b8c1a71267528e1610f734742a 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 8.4E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1855 a37122b8c1a71267528e1610f734742a 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 45 8.4E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1855 a37122b8c1a71267528e1610f734742a 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 46 1.5E-17 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1855 a37122b8c1a71267528e1610f734742a 188 Gene3D G3DSA:1.10.10.60 1 47 2.2E-18 T 23-10-2018 DLM_1855 a37122b8c1a71267528e1610f734742a 188 Gene3D G3DSA:1.10.357.10 51 188 1.5E-24 T 23-10-2018 DLM_1855 a37122b8c1a71267528e1610f734742a 188 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 132 186 2.6E-7 T 23-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type DLM_1855 a37122b8c1a71267528e1610f734742a 188 SUPERFAMILY SSF46689 2 68 9.48E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3790 84e7051757b8f59f267a7354e8671ced 189 PIRSF PIRSF000239 1 189 2.4E-55 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_3790 84e7051757b8f59f267a7354e8671ced 189 SUPERFAMILY SSF52833 4 188 3.45E-60 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3790 84e7051757b8f59f267a7354e8671ced 189 Gene3D G3DSA:3.40.30.10 1 188 4.5E-66 T 23-10-2018 DLM_3790 84e7051757b8f59f267a7354e8671ced 189 Pfam PF00578 AhpC/TSA family 7 134 3.3E-36 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_3790 84e7051757b8f59f267a7354e8671ced 189 TIGRFAM TIGR03137 AhpC: peroxiredoxin 4 189 6.6E-106 T 23-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DLM_3790 84e7051757b8f59f267a7354e8671ced 189 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 183 1.8E-6 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 Pfam PF00574 Clp protease 22 204 2.5E-83 T 23-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 23-10-2018 IPR018215 ClpP, Ser active site DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 Gene3D G3DSA:3.90.226.10 1 209 8.5E-81 T 23-10-2018 DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 203 1.2E-101 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 205 43.533 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 SUPERFAMILY SSF52096 20 206 1.05E-69 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 3.7E-50 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 3.7E-50 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 3.7E-50 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 3.7E-50 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_1091 0e5f4b5981f89c3e35142fab537496fe 210 PRINTS PR00127 Clp protease catalytic subunit P signature 180 199 3.7E-50 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_0047 16e906211558857e446cb63ec65904b1 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 243 51.397 T 23-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_0047 16e906211558857e446cb63ec65904b1 248 Gene3D G3DSA:3.20.20.70 1 246 3.5E-86 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0047 16e906211558857e446cb63ec65904b1 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 234 2.3E-54 T 23-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_0047 16e906211558857e446cb63ec65904b1 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 161 171 - T 23-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_0047 16e906211558857e446cb63ec65904b1 248 Pfam PF00121 Triosephosphate isomerase 4 240 5.5E-79 T 23-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_0047 16e906211558857e446cb63ec65904b1 248 SUPERFAMILY SSF51351 4 244 1.3E-76 T 23-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 SMART SM00421 152 209 1.8E-23 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 1.6E-20 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 SUPERFAMILY SSF46894 150 214 2.96E-21 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 Pfam PF00072 Response regulator receiver domain 6 117 5.7E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 Gene3D G3DSA:3.40.50.12740 4 214 8.2E-71 T 23-10-2018 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 SUPERFAMILY SSF52172 4 135 5.12E-35 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.5E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.5E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.5E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2737 0c2ee87b87fb41a3cde2dba2a3299ae3 218 SMART SM00448 4 117 2.0E-30 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4021 f553f24c61876ae031b370e2b13e0e03 381 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 13 353 6.7E-139 T 23-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 DLM_4021 f553f24c61876ae031b370e2b13e0e03 381 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 203 217 - T 23-10-2018 IPR001482 Type II/IV secretion system protein DLM_4021 f553f24c61876ae031b370e2b13e0e03 381 SUPERFAMILY SSF52540 10 347 6.35E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4021 f553f24c61876ae031b370e2b13e0e03 381 Gene3D G3DSA:3.30.450.90 3 110 2.0E-29 T 23-10-2018 DLM_4021 f553f24c61876ae031b370e2b13e0e03 381 Gene3D G3DSA:3.40.50.300 111 366 4.9E-88 T 23-10-2018 DLM_4021 f553f24c61876ae031b370e2b13e0e03 381 Pfam PF00437 Type II/IV secretion system protein 23 263 6.6E-40 T 23-10-2018 IPR001482 Type II/IV secretion system protein DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 29 71 4.0E-18 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 Gene3D G3DSA:2.40.50.100 21 89 3.7E-28 T 23-10-2018 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 Pfam PF01016 Ribosomal L27 protein 2 82 8.0E-37 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.8E-36 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.8E-36 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.8E-36 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 9.0E-39 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 SUPERFAMILY SSF110324 2 82 3.84E-33 T 23-10-2018 DLM_3501 e2c7bf00d22812a4a0fe45afa5630e8c 91 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.055 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3248 e7b36dbf55e04ce147a3f6a4271241ad 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 268 1.1E-26 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3248 e7b36dbf55e04ce147a3f6a4271241ad 288 SUPERFAMILY SSF161098 88 272 2.09E-41 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3248 e7b36dbf55e04ce147a3f6a4271241ad 288 Gene3D G3DSA:1.10.3720.10 86 275 2.1E-35 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 505 671 9.6E-39 T 23-10-2018 IPR000160 GGDEF domain DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 Pfam PF00990 Diguanylate cyclase, GGDEF domain 510 667 3.0E-46 T 23-10-2018 IPR000160 GGDEF domain DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 SMART SM00065 316 481 1.5E-13 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 SMART SM00065 136 291 0.0083 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 Gene3D G3DSA:3.30.70.270 503 684 5.7E-52 T 23-10-2018 DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 SUPERFAMILY SSF55781 321 496 2.12E-23 T 23-10-2018 DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 Pfam PF13185 GAF domain 336 471 8.8E-12 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 Pfam PF13185 GAF domain 135 282 1.7E-9 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 SUPERFAMILY SSF55073 514 674 1.33E-44 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 SUPERFAMILY SSF141868 688 931 8.5E-85 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 Pfam PF00563 EAL domain 688 926 1.1E-77 T 23-10-2018 IPR001633 EAL domain DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 Gene3D G3DSA:3.20.20.450 685 941 3.3E-94 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 SMART SM00267 498 672 3.8E-60 T 23-10-2018 IPR000160 GGDEF domain DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 SMART SM00052 682 931 2.3E-109 T 23-10-2018 IPR001633 EAL domain DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 Gene3D G3DSA:3.30.450.40 311 485 7.1E-22 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 Gene3D G3DSA:3.30.450.40 110 294 1.5E-12 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_4166 07a5bcb0fa3ccae79eba7aad735412ff 948 SUPERFAMILY SSF55781 121 294 2.84E-16 T 23-10-2018 DLM_2359 9ec9020a09bcd613bdad468959dba642 446 Pfam PF00202 Aminotransferase class-III 33 438 3.9E-80 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2359 9ec9020a09bcd613bdad468959dba642 446 Gene3D G3DSA:3.40.640.10 67 349 1.2E-152 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2359 9ec9020a09bcd613bdad468959dba642 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2359 9ec9020a09bcd613bdad468959dba642 446 PIRSF PIRSF000521 34 146 1.9E-4 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2359 9ec9020a09bcd613bdad468959dba642 446 PIRSF PIRSF000521 191 445 1.2E-15 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2359 9ec9020a09bcd613bdad468959dba642 446 SUPERFAMILY SSF53383 27 444 6.63E-112 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2359 9ec9020a09bcd613bdad468959dba642 446 Gene3D G3DSA:3.90.1150.10 31 438 1.2E-152 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 SUPERFAMILY SSF51206 7 131 3.67E-16 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 SMART SM00116 214 261 2.9E-6 T 23-10-2018 IPR000644 CBS domain DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 SMART SM00116 152 198 0.11 T 23-10-2018 IPR000644 CBS domain DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 Pfam PF00571 CBS domain 145 196 2.6E-4 T 23-10-2018 IPR000644 CBS domain DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 Pfam PF00571 CBS domain 210 260 4.6E-7 T 23-10-2018 IPR000644 CBS domain DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 SUPERFAMILY SSF54631 139 262 8.9E-25 T 23-10-2018 DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 454 596 9.5E-49 T 23-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 Gene3D G3DSA:2.60.120.10 4 133 1.4E-12 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 Pfam PF03445 Putative nucleotidyltransferase DUF294 286 415 5.5E-40 T 23-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 Gene3D G3DSA:3.10.580.10 134 276 1.4E-24 T 23-10-2018 DLM_2509 eb6f7a97bea55e552445e90cac129c10 601 SMART SM00100 10 125 0.0096 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_1122 beb24a92e0a75a29ead9d0a568b2def2 532 Gene3D G3DSA:1.10.287.950 202 532 1.5E-61 T 23-10-2018 DLM_1122 beb24a92e0a75a29ead9d0a568b2def2 532 SUPERFAMILY SSF58104 223 531 1.13E-63 T 23-10-2018 DLM_1122 beb24a92e0a75a29ead9d0a568b2def2 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 315 497 5.1E-40 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1122 beb24a92e0a75a29ead9d0a568b2def2 532 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 171 9.8E-10 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_1122 beb24a92e0a75a29ead9d0a568b2def2 532 SMART SM00283 270 531 3.4E-54 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1122 beb24a92e0a75a29ead9d0a568b2def2 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 6.6E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1122 beb24a92e0a75a29ead9d0a568b2def2 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 6.6E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1122 beb24a92e0a75a29ead9d0a568b2def2 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 6.6E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 Gene3D G3DSA:3.50.50.60 32 287 3.9E-24 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 PIRSF PIRSF000137 14 171 1.0E-11 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 PIRSF PIRSF000137 203 290 7.2E-7 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 PIRSF PIRSF000137 356 530 1.4E-12 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 Pfam PF05199 GMC oxidoreductase 381 520 2.6E-21 T 23-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 SUPERFAMILY SSF51905 27 527 8.03E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 Gene3D G3DSA:3.30.410.40 155 200 3.9E-24 T 23-10-2018 DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 270 284 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 Pfam PF00732 GMC oxidoreductase 32 295 1.6E-45 T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_2013 7f3a627b224c65bc5bb79f7ae9a52741 530 Gene3D G3DSA:3.50.50.60 387 530 2.4E-17 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Gene3D G3DSA:3.40.50.300 6 442 3.0E-123 T 23-10-2018 DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Gene3D G3DSA:1.10.3170.10 153 355 3.0E-123 T 23-10-2018 DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Gene3D G3DSA:3.40.50.300 453 845 1.1E-114 T 23-10-2018 DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 SUPERFAMILY SSF52980 912 1186 5.9E-64 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Pfam PF13361 UvrD-like helicase C-terminal domain 738 827 3.4E-10 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 6 1185 3.6E-280 T 23-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 SUPERFAMILY SSF52540 7 829 7.67E-101 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Pfam PF12705 PD-(D/E)XK nuclease superfamily 963 1157 8.1E-8 T 23-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Gene3D G3DSA:1.10.486.10 591 734 1.1E-114 T 23-10-2018 DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1187 20.478 T 23-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Gene3D G3DSA:3.90.320.10 902 1187 3.9E-82 T 23-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DLM_3428 402b67c8583a9be150832a462c8a4bc8 1187 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 443 4.8E-52 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DLM_2266 01723ea79081486991cf5d924283c503 211 SUPERFAMILY SSF53254 1 206 5.8E-62 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_2266 01723ea79081486991cf5d924283c503 211 Gene3D G3DSA:3.40.50.1240 3 210 2.0E-61 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_2266 01723ea79081486991cf5d924283c503 211 PIRSF PIRSF000709 2 163 2.8E-15 T 23-10-2018 DLM_2266 01723ea79081486991cf5d924283c503 211 SMART SM00855 5 161 8.9E-20 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_2266 01723ea79081486991cf5d924283c503 211 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 200 7.2E-63 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_2266 01723ea79081486991cf5d924283c503 211 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 23-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DLM_3475 a2df82a177c3442b604677c4b847d031 773 SUPERFAMILY SSF51261 38 161 2.56E-5 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3475 a2df82a177c3442b604677c4b847d031 773 Gene3D G3DSA:2.70.70.10 28 168 4.0E-10 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3475 a2df82a177c3442b604677c4b847d031 773 SUPERFAMILY SSF53955 537 616 2.7E-9 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_3475 a2df82a177c3442b604677c4b847d031 773 Pfam PF01551 Peptidase family M23 58 159 3.4E-5 T 23-10-2018 IPR016047 Peptidase M23 DLM_4307 aed781e4c2d17a5f5a4ee153d05b2515 152 Hamap MF_00598 Protein Smg [smg]. 1 152 25.864 T 23-10-2018 IPR007456 Smg DLM_4307 aed781e4c2d17a5f5a4ee153d05b2515 152 Pfam PF04361 Protein of unknown function (DUF494) 1 144 2.1E-46 T 23-10-2018 IPR007456 Smg DLM_0331 229107066ec655ffcd3e7aa8b0cabc11 439 SUPERFAMILY SSF51556 64 363 2.92E-95 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_0331 229107066ec655ffcd3e7aa8b0cabc11 439 Gene3D G3DSA:3.20.20.140 65 355 2.7E-163 T 23-10-2018 DLM_0331 229107066ec655ffcd3e7aa8b0cabc11 439 Gene3D G3DSA:2.30.40.10 14 425 2.7E-163 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_0331 229107066ec655ffcd3e7aa8b0cabc11 439 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 7 437 40.776 T 23-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 DLM_0331 229107066ec655ffcd3e7aa8b0cabc11 439 SUPERFAMILY SSF51338 6 436 1.3E-29 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_0331 229107066ec655ffcd3e7aa8b0cabc11 439 Pfam PF01979 Amidohydrolase family 61 410 1.7E-74 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_3864 1d799630b83ab91748a64acadf087062 461 Gene3D G3DSA:1.10.287.130 47 142 2.2E-26 T 23-10-2018 DLM_3864 1d799630b83ab91748a64acadf087062 461 SMART SM00387 190 308 2.1E-38 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3864 1d799630b83ab91748a64acadf087062 461 SMART SM00388 79 144 3.4E-22 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3864 1d799630b83ab91748a64acadf087062 461 SUPERFAMILY SSF55874 133 304 7.99E-48 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3864 1d799630b83ab91748a64acadf087062 461 Gene3D G3DSA:3.30.565.10 143 308 5.3E-51 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3864 1d799630b83ab91748a64acadf087062 461 Gene3D G3DSA:3.40.50.2300 321 454 4.9E-41 T 23-10-2018 DLM_3864 1d799630b83ab91748a64acadf087062 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 79 144 6.7E-20 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3864 1d799630b83ab91748a64acadf087062 461 SUPERFAMILY SSF52172 332 452 1.31E-37 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3864 1d799630b83ab91748a64acadf087062 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 190 304 7.7E-31 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3864 1d799630b83ab91748a64acadf087062 461 Pfam PF00072 Response regulator receiver domain 335 447 4.6E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3864 1d799630b83ab91748a64acadf087062 461 SMART SM00448 333 447 2.9E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3864 1d799630b83ab91748a64acadf087062 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 305 4.4E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3864 1d799630b83ab91748a64acadf087062 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 286 4.4E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3864 1d799630b83ab91748a64acadf087062 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 233 247 4.4E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3864 1d799630b83ab91748a64acadf087062 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 251 261 4.4E-14 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3864 1d799630b83ab91748a64acadf087062 461 SUPERFAMILY SSF47384 65 145 2.16E-19 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 Gene3D G3DSA:3.40.50.300 31 194 3.0E-41 T 23-10-2018 DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 266 339 2.4E-32 T 23-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 SUPERFAMILY SSF52540 33 264 1.81E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 344 182.432 T 23-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 SMART SM00382 64 191 9.5E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 Gene3D G3DSA:1.10.10.10 270 344 7.1E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 SUPERFAMILY SSF46785 270 341 4.08E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 19 248 2.2E-119 T 23-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 270 340 3.0E-31 T 23-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 Gene3D G3DSA:1.10.8.60 195 268 6.4E-31 T 23-10-2018 DLM_4355 408b9f58ac4f556e07940c0a2e48700b 344 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 37 339 1.7E-146 T 23-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DLM_1705 aea3ffc1a21f05b7f9680e5c895a4b42 163 Pfam PF04073 Aminoacyl-tRNA editing domain 40 150 3.1E-21 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DLM_1705 aea3ffc1a21f05b7f9680e5c895a4b42 163 Gene3D G3DSA:3.90.960.10 3 162 2.3E-44 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_1705 aea3ffc1a21f05b7f9680e5c895a4b42 163 PIRSF PIRSF006181 5 163 4.9E-41 T 23-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DLM_1705 aea3ffc1a21f05b7f9680e5c895a4b42 163 SUPERFAMILY SSF55826 9 159 4.45E-36 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_3352 5c23b95f77824ba2a53e49c188b9e4a3 216 Gene3D G3DSA:1.20.1050.10 87 216 6.5E-48 T 23-10-2018 DLM_3352 5c23b95f77824ba2a53e49c188b9e4a3 216 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 213 6.9E-84 T 23-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 DLM_3352 5c23b95f77824ba2a53e49c188b9e4a3 216 SUPERFAMILY SSF47616 85 214 4.04E-31 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_3352 5c23b95f77824ba2a53e49c188b9e4a3 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 83 7.5E-21 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_3352 5c23b95f77824ba2a53e49c188b9e4a3 216 SUPERFAMILY SSF52833 5 87 1.38E-26 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3352 5c23b95f77824ba2a53e49c188b9e4a3 216 Pfam PF13410 Glutathione S-transferase, C-terminal domain 140 189 7.0E-6 T 23-10-2018 DLM_3352 5c23b95f77824ba2a53e49c188b9e4a3 216 Gene3D G3DSA:3.40.30.10 6 82 9.3E-30 T 23-10-2018 DLM_2308 755162d5b917eb941bc5df38055ca195 100 Gene3D G3DSA:3.30.70.1060 1 98 4.7E-37 T 23-10-2018 DLM_2308 755162d5b917eb941bc5df38055ca195 100 SUPERFAMILY SSF54909 1 98 6.97E-32 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_2308 755162d5b917eb941bc5df38055ca195 100 Pfam PF03795 YCII-related domain 1 95 2.1E-27 T 23-10-2018 IPR005545 YCII-related DLM_0208 501573fe34486d8b456a156860e23dde 173 Gene3D G3DSA:2.30.30.40 15 142 1.5E-36 T 23-10-2018 DLM_0208 501573fe34486d8b456a156860e23dde 173 Gene3D G3DSA:2.40.50.180 30 143 1.5E-36 T 23-10-2018 DLM_0208 501573fe34486d8b456a156860e23dde 173 SUPERFAMILY SSF50341 5 152 6.28E-37 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_0208 501573fe34486d8b456a156860e23dde 173 Pfam PF01584 CheW-like domain 11 150 6.6E-34 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0208 501573fe34486d8b456a156860e23dde 173 SMART SM00260 7 148 2.4E-31 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_3527 07ff9c46bef107630bec13f101833fa9 417 Gene3D G3DSA:2.40.50.100 75 219 5.8E-90 T 23-10-2018 DLM_3527 07ff9c46bef107630bec13f101833fa9 417 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 380 3.2E-73 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_3527 07ff9c46bef107630bec13f101833fa9 417 Gene3D G3DSA:1.10.287.470 110 183 5.8E-90 T 23-10-2018 DLM_3527 07ff9c46bef107630bec13f101833fa9 417 Gene3D G3DSA:2.40.420.20 310 378 5.8E-90 T 23-10-2018 DLM_3527 07ff9c46bef107630bec13f101833fa9 417 Pfam PF13533 Biotin-lipoyl like 76 123 4.6E-14 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DLM_3527 07ff9c46bef107630bec13f101833fa9 417 Gene3D G3DSA:2.40.30.170 62 309 5.8E-90 T 23-10-2018 DLM_3527 07ff9c46bef107630bec13f101833fa9 417 SUPERFAMILY SSF111369 65 306 9.81E-55 T 23-10-2018 DLM_0835 f3662ce85dd9b09b1af6ed1a4f0641e2 367 SUPERFAMILY SSF53613 60 355 1.71E-61 T 23-10-2018 IPR029056 Ribokinase-like DLM_0835 f3662ce85dd9b09b1af6ed1a4f0641e2 367 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 302 315 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_0835 f3662ce85dd9b09b1af6ed1a4f0641e2 367 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 45 9.0E-11 T 23-10-2018 DLM_0835 f3662ce85dd9b09b1af6ed1a4f0641e2 367 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_0835 f3662ce85dd9b09b1af6ed1a4f0641e2 367 Gene3D G3DSA:3.40.1190.20 55 366 1.1E-82 T 23-10-2018 IPR029056 Ribokinase-like DLM_0835 f3662ce85dd9b09b1af6ed1a4f0641e2 367 Pfam PF00294 pfkB family carbohydrate kinase 59 347 5.3E-57 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB DLM_0835 f3662ce85dd9b09b1af6ed1a4f0641e2 367 Gene3D G3DSA:1.10.10.10 2 54 2.7E-9 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0835 f3662ce85dd9b09b1af6ed1a4f0641e2 367 SUPERFAMILY SSF46785 1 54 6.67E-10 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2713 a9c03256134935fc4dc34545b64acd39 361 SMART SM00448 2 116 7.5E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2713 a9c03256134935fc4dc34545b64acd39 361 Pfam PF00072 Response regulator receiver domain 4 116 9.7E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2713 a9c03256134935fc4dc34545b64acd39 361 SUPERFAMILY SSF52172 2 151 5.69E-38 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2713 a9c03256134935fc4dc34545b64acd39 361 SUPERFAMILY SSF109604 155 333 1.54E-41 T 23-10-2018 DLM_2713 a9c03256134935fc4dc34545b64acd39 361 Gene3D G3DSA:3.40.50.2300 1 135 2.6E-37 T 23-10-2018 DLM_2713 a9c03256134935fc4dc34545b64acd39 361 SMART SM00471 165 302 2.7E-7 T 23-10-2018 IPR003607 HD/PDEase domain DLM_2713 a9c03256134935fc4dc34545b64acd39 361 Gene3D G3DSA:1.10.3210.10 143 346 3.7E-73 T 23-10-2018 DLM_2713 a9c03256134935fc4dc34545b64acd39 361 Pfam PF13487 HD domain 220 283 8.2E-15 T 23-10-2018 DLM_1916 d9078807d17b9f62ef27b0091cf21ce5 500 Gene3D G3DSA:1.10.10.10 28 97 2.5E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1916 d9078807d17b9f62ef27b0091cf21ce5 500 SMART SM00345 37 96 8.5E-17 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1916 d9078807d17b9f62ef27b0091cf21ce5 500 SUPERFAMILY SSF53383 135 496 3.81E-87 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_1916 d9078807d17b9f62ef27b0091cf21ce5 500 SUPERFAMILY SSF46785 28 109 2.1E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1916 d9078807d17b9f62ef27b0091cf21ce5 500 Pfam PF00392 Bacterial regulatory proteins, gntR family 33 96 4.6E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1916 d9078807d17b9f62ef27b0091cf21ce5 500 Gene3D G3DSA:3.40.640.10 170 388 1.0E-93 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1916 d9078807d17b9f62ef27b0091cf21ce5 500 Gene3D G3DSA:3.90.1150.10 133 491 1.0E-93 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1916 d9078807d17b9f62ef27b0091cf21ce5 500 Pfam PF00155 Aminotransferase class I and II 169 476 3.1E-31 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_0694 7ef2aecda65160f90040f766b230e15d 134 Pfam PF01814 Hemerythrin HHE cation binding domain 12 122 4.0E-9 T 23-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DLM_0694 7ef2aecda65160f90040f766b230e15d 134 Gene3D G3DSA:1.20.120.520 2 134 9.8E-11 T 23-10-2018 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 SUPERFAMILY SSF54631 94 201 1.16E-27 T 23-10-2018 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 Pfam PF00571 CBS domain 94 138 1.8E-9 T 23-10-2018 IPR000644 CBS domain DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 Pfam PF00571 CBS domain 147 201 1.7E-8 T 23-10-2018 IPR000644 CBS domain DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 Gene3D G3DSA:3.20.20.70 1 485 1.2E-215 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 SMART SM00116 95 142 5.8E-10 T 23-10-2018 IPR000644 CBS domain DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 SMART SM00116 156 204 9.1E-6 T 23-10-2018 IPR000644 CBS domain DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 6.9E-167 T 23-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 23-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 SMART SM01240 6 472 0.0 T 23-10-2018 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 86.356 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 PIRSF PIRSF000130 1 487 4.4E-206 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 1.3E-197 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DLM_0469 5a6f2f5f0e8c40b2db98fcc9e400e5c3 487 SUPERFAMILY SSF51412 2 476 2.22E-126 T 23-10-2018 DLM_2600 88f30faf5e13854e0d4fc6382dd277ad 180 PRINTS PR00449 Transforming protein P21 ras signature 56 78 3.9E-8 T 23-10-2018 DLM_2600 88f30faf5e13854e0d4fc6382dd277ad 180 PRINTS PR00449 Transforming protein P21 ras signature 152 174 3.9E-8 T 23-10-2018 DLM_2600 88f30faf5e13854e0d4fc6382dd277ad 180 PRINTS PR00449 Transforming protein P21 ras signature 117 130 3.9E-8 T 23-10-2018 DLM_2600 88f30faf5e13854e0d4fc6382dd277ad 180 PRINTS PR00449 Transforming protein P21 ras signature 6 27 3.9E-8 T 23-10-2018 DLM_2600 88f30faf5e13854e0d4fc6382dd277ad 180 SUPERFAMILY SSF52540 5 171 3.7E-23 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2600 88f30faf5e13854e0d4fc6382dd277ad 180 Gene3D G3DSA:3.40.50.300 2 175 1.6E-25 T 23-10-2018 DLM_2600 88f30faf5e13854e0d4fc6382dd277ad 180 Pfam PF03029 Conserved hypothetical ATP binding protein 31 136 8.2E-11 T 23-10-2018 IPR004130 GPN-loop GTPase DLM_4541 133553f71c2730944ebb54ed9b6c6061 155 Gene3D G3DSA:1.10.10.10 1 155 1.9E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4541 133553f71c2730944ebb54ed9b6c6061 155 SUPERFAMILY SSF46785 8 147 2.1E-33 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4541 133553f71c2730944ebb54ed9b6c6061 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.1E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_4541 133553f71c2730944ebb54ed9b6c6061 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.1E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_4541 133553f71c2730944ebb54ed9b6c6061 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 1.1E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_4541 133553f71c2730944ebb54ed9b6c6061 155 Pfam PF01047 MarR family 36 94 1.6E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_4541 133553f71c2730944ebb54ed9b6c6061 155 SMART SM00347 29 129 7.5E-24 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3594 7199f886227eb0febdec56c6242cce36 503 Gene3D G3DSA:3.40.50.300 243 495 1.4E-45 T 23-10-2018 DLM_3594 7199f886227eb0febdec56c6242cce36 503 SMART SM00382 282 475 0.0019 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3594 7199f886227eb0febdec56c6242cce36 503 SMART SM00382 31 230 1.1E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3594 7199f886227eb0febdec56c6242cce36 503 Gene3D G3DSA:3.40.50.300 2 241 7.1E-52 T 23-10-2018 DLM_3594 7199f886227eb0febdec56c6242cce36 503 Pfam PF00005 ABC transporter 273 427 1.4E-23 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3594 7199f886227eb0febdec56c6242cce36 503 SUPERFAMILY SSF52540 261 480 1.46E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3594 7199f886227eb0febdec56c6242cce36 503 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3594 7199f886227eb0febdec56c6242cce36 503 SUPERFAMILY SSF52540 11 231 5.79E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3594 7199f886227eb0febdec56c6242cce36 503 Pfam PF00005 ABC transporter 22 174 1.2E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0583 8fd3749833411931293e35942582dac8 538 Pfam PF04185 Phosphoesterase family 37 505 3.5E-99 T 23-10-2018 IPR007312 Phosphoesterase GO:0016788 DLM_0583 8fd3749833411931293e35942582dac8 538 SUPERFAMILY SSF53649 309 490 5.49E-18 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DLM_0583 8fd3749833411931293e35942582dac8 538 TIGRFAM TIGR03397 acid_phos_Burk: acid phosphatase, Burkholderia-type 37 535 6.3E-231 T 23-10-2018 IPR017768 Acid phosphatase, AcpA GO:0003993 DLM_0583 8fd3749833411931293e35942582dac8 538 Gene3D G3DSA:3.40.720.10 275 536 1.4E-38 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DLM_0583 8fd3749833411931293e35942582dac8 538 Gene3D G3DSA:3.40.720.10 26 211 7.8E-28 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DLM_3871 e0607edfd3d6c59b3fb494172eb81ecb 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.6E-20 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_3871 e0607edfd3d6c59b3fb494172eb81ecb 241 SUPERFAMILY SSF52172 3 131 4.7E-42 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3871 e0607edfd3d6c59b3fb494172eb81ecb 241 SMART SM00448 4 115 9.3E-44 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3871 e0607edfd3d6c59b3fb494172eb81ecb 241 SUPERFAMILY SSF46894 133 235 1.53E-25 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_3871 e0607edfd3d6c59b3fb494172eb81ecb 241 Pfam PF00072 Response regulator receiver domain 6 116 1.9E-31 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3871 e0607edfd3d6c59b3fb494172eb81ecb 241 SMART SM00862 156 233 1.6E-21 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_3871 e0607edfd3d6c59b3fb494172eb81ecb 241 Gene3D G3DSA:3.40.50.2300 1 134 2.1E-39 T 23-10-2018 DLM_3871 e0607edfd3d6c59b3fb494172eb81ecb 241 Gene3D G3DSA:1.10.10.10 135 240 8.2E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3018 84339b8950234aa2f00b83486f3e8297 367 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 358 1.0E-162 T 23-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 DLM_3018 84339b8950234aa2f00b83486f3e8297 367 SUPERFAMILY SSF53659 2 358 1.23E-111 T 23-10-2018 DLM_3018 84339b8950234aa2f00b83486f3e8297 367 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 354 2.1E-82 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_3018 84339b8950234aa2f00b83486f3e8297 367 SMART SM01329 5 354 1.9E-171 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_3018 84339b8950234aa2f00b83486f3e8297 367 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DLM_3018 84339b8950234aa2f00b83486f3e8297 367 Gene3D G3DSA:3.40.718.10 1 361 4.8E-139 T 23-10-2018 DLM_2271 95143d0698ceaf4a9b04788befdf6430 141 SMART SM01034 2 94 2.8E-41 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 DLM_2271 95143d0698ceaf4a9b04788befdf6430 141 SUPERFAMILY SSF54975 1 130 1.44E-38 T 23-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DLM_2271 95143d0698ceaf4a9b04788befdf6430 141 Pfam PF04940 Sensors of blue-light using FAD 2 93 2.2E-30 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 DLM_2271 95143d0698ceaf4a9b04788befdf6430 141 Gene3D G3DSA:3.30.70.100 1 128 1.3E-35 T 23-10-2018 DLM_1804 4b33575215c3448ee5b9737f91dea93a 419 SUPERFAMILY SSF103473 2 411 1.83E-81 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1804 4b33575215c3448ee5b9737f91dea93a 419 Pfam PF07690 Major Facilitator Superfamily 12 375 5.5E-54 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1804 4b33575215c3448ee5b9737f91dea93a 419 Gene3D G3DSA:1.20.1250.20 215 414 2.6E-30 T 23-10-2018 DLM_1804 4b33575215c3448ee5b9737f91dea93a 419 Gene3D G3DSA:1.20.1250.20 1 195 1.0E-47 T 23-10-2018 DLM_1804 4b33575215c3448ee5b9737f91dea93a 419 PIRSF PIRSF002808 1 337 2.3E-32 T 23-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DLM_1804 4b33575215c3448ee5b9737f91dea93a 419 PIRSF PIRSF002808 298 413 0.037 T 23-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DLM_3451 b4acac695c60813c48467752e4210cdc 191 SUPERFAMILY SSF81342 4 176 3.53E-35 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DLM_3451 b4acac695c60813c48467752e4210cdc 191 Gene3D G3DSA:1.20.950.20 1 159 1.8E-15 T 23-10-2018 DLM_3451 b4acac695c60813c48467752e4210cdc 191 Pfam PF01292 Prokaryotic cytochrome b561 10 171 3.9E-20 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 136 4.2E-18 T 23-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 Gene3D G3DSA:3.40.350.10 3 151 1.6E-41 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 Pfam PF00557 Metallopeptidase family M24 313 527 2.1E-45 T 23-10-2018 IPR000994 Peptidase M24 DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 SUPERFAMILY SSF53092 164 300 6.63E-6 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 SUPERFAMILY SSF55920 308 564 2.75E-53 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 Gene3D G3DSA:3.90.230.10 305 598 1.4E-96 T 23-10-2018 DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 Pfam PF16188 C-terminal region of peptidase_M24 539 598 5.3E-24 T 23-10-2018 IPR032416 Peptidase M24, C-terminal domain DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 2.3E-40 T 23-10-2018 DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 SUPERFAMILY SSF53092 9 137 6.8E-14 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DLM_1170 5328ec578bc7629d37a7b30a6d6c9617 598 Gene3D G3DSA:3.40.350.10 152 299 3.5E-36 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DLM_2427 22b383fb3753950ebd24c57d18c46f7e 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 236 248 4.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2427 22b383fb3753950ebd24c57d18c46f7e 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 220 236 4.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2427 22b383fb3753950ebd24c57d18c46f7e 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 220 4.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2427 22b383fb3753950ebd24c57d18c46f7e 266 Pfam PF00196 Bacterial regulatory proteins, luxR family 206 258 1.4E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2427 22b383fb3753950ebd24c57d18c46f7e 266 ProSitePatterns PS00622 LuxR-type HTH domain signature. 220 247 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2427 22b383fb3753950ebd24c57d18c46f7e 266 SUPERFAMILY SSF46894 199 262 1.19E-16 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_2427 22b383fb3753950ebd24c57d18c46f7e 266 SMART SM00421 203 260 4.5E-17 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_2427 22b383fb3753950ebd24c57d18c46f7e 266 Gene3D G3DSA:1.10.10.10 153 266 2.4E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 SMART SM01403 7 101 6.4E-55 T 23-10-2018 IPR027486 Ribosomal protein S10 domain DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 5.5E-35 T 23-10-2018 IPR027486 Ribosomal protein S10 domain DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.205 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 9.6E-17 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 9.6E-17 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 9.6E-17 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 Gene3D G3DSA:3.30.70.600 1 103 1.5E-36 T 23-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 SUPERFAMILY SSF54999 5 102 2.35E-37 T 23-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DLM_4390 1d85b54d86a95ffbbf6ef751970141e3 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.5E-45 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_3072 6e206c503f4bc3db9227da75cd272aaf 377 Gene3D G3DSA:1.10.10.2510 210 371 1.1E-23 T 23-10-2018 DLM_3072 6e206c503f4bc3db9227da75cd272aaf 377 Pfam PF08007 Cupin superfamily protein 12 311 4.0E-91 T 23-10-2018 IPR003347 JmjC domain DLM_3072 6e206c503f4bc3db9227da75cd272aaf 377 Gene3D G3DSA:2.60.120.650 1 208 4.4E-79 T 23-10-2018 DLM_3072 6e206c503f4bc3db9227da75cd272aaf 377 SMART SM00558 90 219 7.2E-4 T 23-10-2018 IPR003347 JmjC domain DLM_3072 6e206c503f4bc3db9227da75cd272aaf 377 SUPERFAMILY SSF51197 5 293 6.45E-72 T 23-10-2018 DLM_0515 5eeb0079e9a0d0e86d6dd59640bf47c3 322 Gene3D G3DSA:3.40.190.10 93 292 9.7E-51 T 23-10-2018 DLM_0515 5eeb0079e9a0d0e86d6dd59640bf47c3 322 SUPERFAMILY SSF53850 90 298 7.6E-38 T 23-10-2018 DLM_0515 5eeb0079e9a0d0e86d6dd59640bf47c3 322 Gene3D G3DSA:1.10.10.10 4 92 3.6E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0515 5eeb0079e9a0d0e86d6dd59640bf47c3 322 Pfam PF03466 LysR substrate binding domain 90 296 1.4E-32 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0515 5eeb0079e9a0d0e86d6dd59640bf47c3 322 Gene3D G3DSA:3.40.190.10 165 267 9.7E-51 T 23-10-2018 DLM_0515 5eeb0079e9a0d0e86d6dd59640bf47c3 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.0E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0515 5eeb0079e9a0d0e86d6dd59640bf47c3 322 SUPERFAMILY SSF46785 5 114 2.33E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1017 aa96d1aa833351a227df6c08f29e4ae9 425 Pfam PF12710 haloacid dehalogenase-like hydrolase 218 358 1.1E-9 T 23-10-2018 DLM_1017 aa96d1aa833351a227df6c08f29e4ae9 425 Gene3D G3DSA:1.20.1440.320 94 251 1.4E-129 T 23-10-2018 DLM_1017 aa96d1aa833351a227df6c08f29e4ae9 425 SUPERFAMILY SSF56784 67 359 2.22E-21 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1017 aa96d1aa833351a227df6c08f29e4ae9 425 Gene3D G3DSA:3.40.50.1000 41 401 1.4E-129 T 23-10-2018 IPR023214 HAD superfamily DLM_4165 063a9f71b9b28ddda11ab5d6c27ddb44 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 19 376 1.1E-144 T 23-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 DLM_4165 063a9f71b9b28ddda11ab5d6c27ddb44 384 SUPERFAMILY SSF53383 6 381 5.92E-109 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4165 063a9f71b9b28ddda11ab5d6c27ddb44 384 Gene3D G3DSA:3.40.640.10 56 284 1.5E-135 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_4165 063a9f71b9b28ddda11ab5d6c27ddb44 384 Gene3D G3DSA:3.90.1150.10 40 375 1.5E-135 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_4165 063a9f71b9b28ddda11ab5d6c27ddb44 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 2 382 47.382 T 23-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 DLM_4165 063a9f71b9b28ddda11ab5d6c27ddb44 384 Pfam PF00155 Aminotransferase class I and II 41 376 1.2E-59 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 SUPERFAMILY SSF55785 11 124 6.81E-25 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 Gene3D G3DSA:3.30.70.270 133 299 2.0E-51 T 23-10-2018 DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 SUPERFAMILY SSF55073 142 297 1.88E-46 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 297 5.3E-51 T 23-10-2018 IPR000160 GGDEF domain DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 SMART SM00091 6 79 7.6E-4 T 23-10-2018 IPR000014 PAS domain DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 Gene3D G3DSA:3.30.450.20 4 132 5.8E-36 T 23-10-2018 DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 295 6.8E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 130 2.5E-18 T 23-10-2018 IPR000014 PAS domain DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 SMART SM00086 84 126 3.3E-4 T 23-10-2018 IPR001610 PAC motif DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 SMART SM00267 126 299 2.2E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_3842 94f897c0c64ce40fb9514f4e6d8220d1 300 Pfam PF13426 PAS domain 28 125 5.2E-19 T 23-10-2018 IPR000014 PAS domain DLM_0167 171562f0ec72def6d26007aeb171e80b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.3E-18 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DLM_0167 171562f0ec72def6d26007aeb171e80b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.3E-18 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DLM_0167 171562f0ec72def6d26007aeb171e80b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.3E-18 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DLM_0167 171562f0ec72def6d26007aeb171e80b 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 23-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_0167 171562f0ec72def6d26007aeb171e80b 154 Gene3D G3DSA:2.40.50.100 76 154 9.9E-32 T 23-10-2018 DLM_0167 171562f0ec72def6d26007aeb171e80b 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 2.4E-58 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DLM_0167 171562f0ec72def6d26007aeb171e80b 154 SUPERFAMILY SSF51230 78 154 1.44E-25 T 23-10-2018 IPR011053 Single hybrid motif DLM_0167 171562f0ec72def6d26007aeb171e80b 154 Pfam PF00364 Biotin-requiring enzyme 80 153 4.5E-25 T 23-10-2018 IPR000089 Biotin/lipoyl attachment DLM_3392 384212cdfd4bf4d4acfbbc16122e3bc6 327 Pfam PF12833 Helix-turn-helix domain 237 317 4.0E-20 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3392 384212cdfd4bf4d4acfbbc16122e3bc6 327 Gene3D G3DSA:1.10.10.60 214 321 2.9E-27 T 23-10-2018 DLM_3392 384212cdfd4bf4d4acfbbc16122e3bc6 327 SMART SM00342 230 315 5.4E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3392 384212cdfd4bf4d4acfbbc16122e3bc6 327 Pfam PF14525 AraC-binding-like domain 25 197 5.0E-20 T 23-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like DLM_3392 384212cdfd4bf4d4acfbbc16122e3bc6 327 SUPERFAMILY SSF46689 265 318 6.27E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3392 384212cdfd4bf4d4acfbbc16122e3bc6 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 299 1.8E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_3392 384212cdfd4bf4d4acfbbc16122e3bc6 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 315 1.8E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_0256 5ae94073ceb2d73588d548b44bd76429 243 SUPERFAMILY SSF52540 6 239 1.5E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0256 5ae94073ceb2d73588d548b44bd76429 243 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 217 238 1.6E-7 T 23-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DLM_0256 5ae94073ceb2d73588d548b44bd76429 243 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0256 5ae94073ceb2d73588d548b44bd76429 243 Gene3D G3DSA:3.40.50.300 5 243 6.5E-70 T 23-10-2018 DLM_0256 5ae94073ceb2d73588d548b44bd76429 243 Pfam PF00005 ABC transporter 23 168 1.9E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0256 5ae94073ceb2d73588d548b44bd76429 243 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 7 243 9.9E-118 T 23-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 DLM_0256 5ae94073ceb2d73588d548b44bd76429 243 SMART SM00382 31 224 5.0E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1141 bc907f6fdf8b37f45b582e44bb42db21 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.8E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1141 bc907f6fdf8b37f45b582e44bb42db21 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.8E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1141 bc907f6fdf8b37f45b582e44bb42db21 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.8E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1141 bc907f6fdf8b37f45b582e44bb42db21 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.8E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1141 bc907f6fdf8b37f45b582e44bb42db21 254 Pfam PF00106 short chain dehydrogenase 3 198 4.4E-34 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1141 bc907f6fdf8b37f45b582e44bb42db21 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_1141 bc907f6fdf8b37f45b582e44bb42db21 254 SUPERFAMILY SSF51735 3 235 3.05E-39 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1141 bc907f6fdf8b37f45b582e44bb42db21 254 Gene3D G3DSA:3.40.50.720 1 244 1.3E-47 T 23-10-2018 DLM_0513 b1358e3d50d0afef69aaf469732091a9 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 9.2E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_0513 b1358e3d50d0afef69aaf469732091a9 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 9.2E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_0513 b1358e3d50d0afef69aaf469732091a9 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 2.2E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_0513 b1358e3d50d0afef69aaf469732091a9 195 SUPERFAMILY SSF46689 4 78 9.75E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0513 b1358e3d50d0afef69aaf469732091a9 195 Gene3D G3DSA:1.10.357.10 1 193 9.2E-42 T 23-10-2018 DLM_2753 fbbcc237b4880a2612db50fa40294a9b 335 Gene3D G3DSA:1.10.10.2890 19 75 2.2E-19 T 23-10-2018 DLM_2753 fbbcc237b4880a2612db50fa40294a9b 335 Gene3D G3DSA:3.30.70.3460 76 133 2.2E-19 T 23-10-2018 DLM_2753 fbbcc237b4880a2612db50fa40294a9b 335 Gene3D G3DSA:3.30.70.3460 198 335 1.2E-27 T 23-10-2018 DLM_3969 477c2feabe48ee78a001cb6676d5000b 150 Pfam PF00583 Acetyltransferase (GNAT) family 27 136 3.1E-15 T 23-10-2018 IPR000182 GNAT domain DLM_3969 477c2feabe48ee78a001cb6676d5000b 150 Gene3D G3DSA:3.40.630.30 2 149 2.5E-38 T 23-10-2018 DLM_3969 477c2feabe48ee78a001cb6676d5000b 150 SUPERFAMILY SSF55729 5 136 4.46E-32 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3780 549513d1f54773bc4a2729b239012e07 330 Pfam PF10974 Protein of unknown function (DUF2804) 26 329 1.1E-59 T 23-10-2018 IPR021243 Protein of unknown function DUF2804 DLM_0315 1219c515a3824ef5d5f5fefe6ba1a939 206 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 6 206 31.396 T 23-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 DLM_0315 1219c515a3824ef5d5f5fefe6ba1a939 206 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 47 201 3.4E-42 T 23-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 DLM_0315 1219c515a3824ef5d5f5fefe6ba1a939 206 Gene3D G3DSA:1.20.1260.10 37 196 3.5E-5 T 23-10-2018 IPR012347 Ferritin-like DLM_0315 1219c515a3824ef5d5f5fefe6ba1a939 206 SUPERFAMILY SSF47240 52 179 7.58E-17 T 23-10-2018 IPR009078 Ferritin-like superfamily DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 SUPERFAMILY SSF46785 5 114 3.52E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 Pfam PF03466 LysR substrate binding domain 90 297 1.6E-32 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 Gene3D G3DSA:3.40.190.10 94 293 8.0E-50 T 23-10-2018 DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.3E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 SUPERFAMILY SSF53850 91 297 1.05E-37 T 23-10-2018 DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.4E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.4E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.4E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 Gene3D G3DSA:3.40.190.10 166 269 8.0E-50 T 23-10-2018 DLM_0512 7391cd1097d152dd7dbcf5f9bdb62455 298 Gene3D G3DSA:1.10.10.10 4 93 8.5E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2393 05d2348bee55074f4e9531bfc2b953d9 173 Gene3D G3DSA:1.10.520.40 1 168 3.1E-45 T 23-10-2018 IPR038287 Cse2 superfamily DLM_2393 05d2348bee55074f4e9531bfc2b953d9 173 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 22 166 6.5E-36 T 23-10-2018 IPR013382 CRISPR-associated protein Cse2 DLM_2393 05d2348bee55074f4e9531bfc2b953d9 173 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 12 168 1.9E-23 T 23-10-2018 IPR013382 CRISPR-associated protein Cse2 DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 Pfam PF13899 Thioredoxin-like 490 570 1.7E-12 T 23-10-2018 DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 Gene3D G3DSA:2.60.40.1250 29 155 4.0E-37 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 12 592 32.836 T 23-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 SUPERFAMILY SSF52833 485 590 1.08E-20 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 188 394 5.3E-17 T 23-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 ProSitePatterns PS00194 Thioredoxin family active site. 506 524 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 Pfam PF11412 Disulphide bond corrector protein DsbC 33 146 4.6E-30 T 23-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 SUPERFAMILY SSF74863 32 147 1.7E-31 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DLM_2543 637512aa3aef31b7f8662104e4f4b442 592 Gene3D G3DSA:3.40.30.10 471 592 1.7E-28 T 23-10-2018 DLM_3027 2e5d9887a21a80096fca07551c95ff49 432 ProSitePatterns PS00161 Isocitrate lyase signature. 191 196 - T 23-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 DLM_3027 2e5d9887a21a80096fca07551c95ff49 432 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 254 431 6.8E-87 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DLM_3027 2e5d9887a21a80096fca07551c95ff49 432 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 253 1.0E-107 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DLM_3027 2e5d9887a21a80096fca07551c95ff49 432 Pfam PF00463 Isocitrate lyase family 9 253 2.0E-58 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DLM_3027 2e5d9887a21a80096fca07551c95ff49 432 Pfam PF00463 Isocitrate lyase family 254 431 2.1E-49 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DLM_3027 2e5d9887a21a80096fca07551c95ff49 432 SUPERFAMILY SSF51621 5 431 3.14E-157 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_3027 2e5d9887a21a80096fca07551c95ff49 432 Gene3D G3DSA:3.20.20.60 1 414 1.2E-176 T 23-10-2018 DLM_3027 2e5d9887a21a80096fca07551c95ff49 432 PIRSF PIRSF001362 1 432 1.6E-227 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DLM_1861 000f3f26c3ca9179e8a40395c5f0a6c2 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 385 4.2E-52 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_1861 000f3f26c3ca9179e8a40395c5f0a6c2 406 SUPERFAMILY SSF111369 52 243 6.41E-29 T 23-10-2018 DLM_1861 000f3f26c3ca9179e8a40395c5f0a6c2 406 Gene3D G3DSA:2.40.30.170 49 323 4.7E-96 T 23-10-2018 DLM_1861 000f3f26c3ca9179e8a40395c5f0a6c2 406 Gene3D G3DSA:2.40.50.100 60 222 4.7E-96 T 23-10-2018 DLM_1861 000f3f26c3ca9179e8a40395c5f0a6c2 406 Gene3D G3DSA:1.10.287.470 94 185 4.7E-96 T 23-10-2018 DLM_1861 000f3f26c3ca9179e8a40395c5f0a6c2 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 265 3.1E-17 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_1861 000f3f26c3ca9179e8a40395c5f0a6c2 406 Gene3D G3DSA:2.40.420.20 45 384 4.7E-96 T 23-10-2018 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 Gene3D G3DSA:3.40.50.720 18 227 3.4E-55 T 23-10-2018 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 SUPERFAMILY SSF48179 230 327 8.84E-31 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 36 210 6.1E-41 T 23-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 SUPERFAMILY SSF52413 340 444 7.46E-26 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 PIRSF PIRSF000124 34 451 1.1E-60 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 230 321 3.5E-29 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 SMART SM00984 348 446 7.4E-28 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 36 441 3.5E-128 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 348 441 1.8E-20 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 Gene3D G3DSA:3.40.50.720 229 450 1.3E-61 T 23-10-2018 DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 SUPERFAMILY SSF51735 36 224 2.18E-42 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4445 98b5cbb0c0bf1ba012fc34bcb259de77 454 PIRSF PIRSF500136 24 452 3.6E-137 T 23-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 DLM_4352 fad387afe533590366666b93e807a0b1 315 PIRSF PIRSF005355 11 315 6.8E-52 T 23-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 DLM_4352 fad387afe533590366666b93e807a0b1 315 Pfam PF01040 UbiA prenyltransferase family 38 287 9.2E-28 T 23-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DLM_3929 d25c426814d32db11018665b46b50713 416 SUPERFAMILY SSF51556 71 370 1.84E-83 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_3929 d25c426814d32db11018665b46b50713 416 Pfam PF01979 Amidohydrolase family 69 396 1.1E-15 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_3929 d25c426814d32db11018665b46b50713 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 9 410 41.025 T 23-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3929 d25c426814d32db11018665b46b50713 416 SUPERFAMILY SSF51338 8 408 5.76E-28 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_3929 d25c426814d32db11018665b46b50713 416 Gene3D G3DSA:3.20.20.140 72 370 7.1E-163 T 23-10-2018 DLM_3929 d25c426814d32db11018665b46b50713 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 33 408 1.1E-142 T 23-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DLM_3929 d25c426814d32db11018665b46b50713 416 Gene3D G3DSA:2.30.40.10 14 407 7.1E-163 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_3766 b6515116af86e0891199e5bcd26fa3fa 466 SUPERFAMILY SSF103473 11 450 3.4E-49 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3766 b6515116af86e0891199e5bcd26fa3fa 466 Gene3D G3DSA:1.20.1250.20 255 453 2.7E-10 T 23-10-2018 DLM_3766 b6515116af86e0891199e5bcd26fa3fa 466 Gene3D G3DSA:1.20.1720.10 9 249 1.2E-33 T 23-10-2018 DLM_3766 b6515116af86e0891199e5bcd26fa3fa 466 Pfam PF07690 Major Facilitator Superfamily 18 410 2.7E-34 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_4546 91f1a0e4863f58fc1e9a1ff2bb963743 1160 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1152 22.092 T 23-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DLM_4546 91f1a0e4863f58fc1e9a1ff2bb963743 1160 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1143 1.2E-65 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DLM_4546 91f1a0e4863f58fc1e9a1ff2bb963743 1160 SUPERFAMILY SSF52540 2 1147 2.66E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4546 91f1a0e4863f58fc1e9a1ff2bb963743 1160 PIRSF PIRSF005719 1 1159 2.0E-239 T 23-10-2018 IPR024704 Structural maintenance of chromosomes protein DLM_4546 91f1a0e4863f58fc1e9a1ff2bb963743 1160 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1150 4.5E-301 T 23-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DLM_4546 91f1a0e4863f58fc1e9a1ff2bb963743 1160 SUPERFAMILY SSF75553 476 637 3.53E-8 T 23-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 DLM_4546 91f1a0e4863f58fc1e9a1ff2bb963743 1160 Gene3D G3DSA:3.40.50.300 1 253 9.4E-52 T 23-10-2018 DLM_4546 91f1a0e4863f58fc1e9a1ff2bb963743 1160 Gene3D G3DSA:3.40.50.300 893 1160 1.9E-44 T 23-10-2018 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 Gene3D G3DSA:1.10.287.470 99 122 8.0E-12 T 23-10-2018 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 SUPERFAMILY SSF111369 60 145 4.05E-10 T 23-10-2018 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 Gene3D G3DSA:2.40.50.100 64 98 8.0E-12 T 23-10-2018 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 Gene3D G3DSA:1.10.287.470 132 217 5.3E-10 T 23-10-2018 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 Pfam PF13533 Biotin-lipoyl like 64 113 2.6E-12 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 293 317 1.1E-7 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 367 382 1.1E-7 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 261 282 1.1E-7 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 1.1E-7 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 Pfam PF13437 HlyD family secretion protein 249 360 1.4E-15 T 23-10-2018 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 Gene3D G3DSA:2.40.30.170 263 382 1.1E-30 T 23-10-2018 DLM_1857 3805e2a713ff4bda6e36e416e42589cb 382 SUPERFAMILY SSF111369 196 299 1.12E-9 T 23-10-2018 DLM_2722 e7ce700ddf1ae93213625b1e43bda5ca 353 Gene3D G3DSA:3.30.70.270 182 344 3.5E-45 T 23-10-2018 DLM_2722 e7ce700ddf1ae93213625b1e43bda5ca 353 SMART SM00267 180 343 2.8E-44 T 23-10-2018 IPR000160 GGDEF domain DLM_2722 e7ce700ddf1ae93213625b1e43bda5ca 353 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 338 1.8E-32 T 23-10-2018 IPR000160 GGDEF domain DLM_2722 e7ce700ddf1ae93213625b1e43bda5ca 353 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 342 2.2E-30 T 23-10-2018 IPR000160 GGDEF domain DLM_2722 e7ce700ddf1ae93213625b1e43bda5ca 353 SUPERFAMILY SSF55073 196 344 1.49E-37 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4085 e7b39f2e62860b3f09a45fee90117db2 315 Gene3D G3DSA:2.40.128.130 3 315 1.4E-61 T 23-10-2018 IPR036709 Autotransporter beta-domain superfamily DLM_4085 e7b39f2e62860b3f09a45fee90117db2 315 SMART SM00869 42 305 5.5E-37 T 23-10-2018 IPR005546 Autotransporter beta-domain DLM_4085 e7b39f2e62860b3f09a45fee90117db2 315 SUPERFAMILY SSF103515 13 315 2.22E-51 T 23-10-2018 IPR036709 Autotransporter beta-domain superfamily DLM_4085 e7b39f2e62860b3f09a45fee90117db2 315 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 9 313 5.3E-20 T 23-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 DLM_4085 e7b39f2e62860b3f09a45fee90117db2 315 Pfam PF03797 Autotransporter beta-domain 45 295 1.5E-47 T 23-10-2018 IPR005546 Autotransporter beta-domain DLM_3888 3ecc97417b61be205b2eeea94527d9ee 301 Pfam PF00892 EamA-like transporter family 164 299 2.2E-20 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3888 3ecc97417b61be205b2eeea94527d9ee 301 Pfam PF00892 EamA-like transporter family 23 153 4.2E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3888 3ecc97417b61be205b2eeea94527d9ee 301 SUPERFAMILY SSF103481 206 300 1.96E-11 T 23-10-2018 DLM_3888 3ecc97417b61be205b2eeea94527d9ee 301 SUPERFAMILY SSF103481 56 157 7.45E-8 T 23-10-2018 DLM_4392 1c0c0fba97a895665199086ed49ec4cc 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 2.9E-67 T 23-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4392 1c0c0fba97a895665199086ed49ec4cc 206 SUPERFAMILY SSF52166 1 205 2.35E-67 T 23-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4392 1c0c0fba97a895665199086ed49ec4cc 206 Gene3D G3DSA:3.40.1370.10 2 206 1.6E-63 T 23-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4392 1c0c0fba97a895665199086ed49ec4cc 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.449 T 23-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4392 1c0c0fba97a895665199086ed49ec4cc 206 Pfam PF00573 Ribosomal protein L4/L1 family 19 203 4.8E-59 T 23-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DLM_4455 b5fbbdc5933391be23aceee94a99836a 411 Pfam PF13692 Glycosyl transferases group 1 233 373 1.9E-15 T 23-10-2018 DLM_4455 b5fbbdc5933391be23aceee94a99836a 411 Pfam PF13579 Glycosyl transferase 4-like domain 16 201 8.2E-25 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DLM_4455 b5fbbdc5933391be23aceee94a99836a 411 Gene3D G3DSA:3.40.50.2000 6 213 1.3E-20 T 23-10-2018 DLM_4455 b5fbbdc5933391be23aceee94a99836a 411 Gene3D G3DSA:3.40.50.2000 214 390 4.7E-23 T 23-10-2018 DLM_4455 b5fbbdc5933391be23aceee94a99836a 411 SUPERFAMILY SSF53756 2 405 6.6E-54 T 23-10-2018 DLM_3602 a0074961030895496380371113965a00 387 SUPERFAMILY SSF103473 5 368 2.22E-30 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3602 a0074961030895496380371113965a00 387 Gene3D G3DSA:1.20.1250.20 208 371 6.9E-12 T 23-10-2018 DLM_3602 a0074961030895496380371113965a00 387 Gene3D G3DSA:1.20.1250.20 6 190 7.5E-11 T 23-10-2018 DLM_3602 a0074961030895496380371113965a00 387 Pfam PF07690 Major Facilitator Superfamily 19 186 7.6E-10 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_3602 a0074961030895496380371113965a00 387 Pfam PF07690 Major Facilitator Superfamily 214 360 6.2E-12 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2254 dad39454244b5e814b305486d8310c1e 199 SMART SM00471 35 153 8.8E-4 T 23-10-2018 IPR003607 HD/PDEase domain DLM_2254 dad39454244b5e814b305486d8310c1e 199 Pfam PF13023 HD domain 18 176 7.3E-47 T 23-10-2018 IPR006674 HD domain DLM_2254 dad39454244b5e814b305486d8310c1e 199 SUPERFAMILY SSF109604 8 179 1.22E-41 T 23-10-2018 DLM_2254 dad39454244b5e814b305486d8310c1e 199 Gene3D G3DSA:1.10.3210.10 6 198 3.8E-49 T 23-10-2018 DLM_1218 71dd44b9ce3ad36fbb62b0edb99b71a9 302 SUPERFAMILY SSF53474 29 299 6.7E-50 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1218 71dd44b9ce3ad36fbb62b0edb99b71a9 302 Gene3D G3DSA:3.40.50.1820 17 299 2.8E-56 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1218 71dd44b9ce3ad36fbb62b0edb99b71a9 302 Pfam PF00561 alpha/beta hydrolase fold 49 152 1.2E-16 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_4004 149fdb3ac2e915810e4cafa3e28ee5d9 273 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 52 251 1.6E-75 T 23-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 DLM_4004 149fdb3ac2e915810e4cafa3e28ee5d9 273 PIRSF PIRSF028477 2 270 1.0E-69 T 23-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 DLM_1552 3cd3c4ee564896623f078f2ee5a2e574 251 Gene3D G3DSA:3.40.50.300 1 247 5.5E-52 T 23-10-2018 DLM_1552 3cd3c4ee564896623f078f2ee5a2e574 251 Pfam PF00005 ABC transporter 24 173 2.6E-25 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1552 3cd3c4ee564896623f078f2ee5a2e574 251 SMART SM00382 31 247 1.2E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1552 3cd3c4ee564896623f078f2ee5a2e574 251 SUPERFAMILY SSF52540 4 245 7.57E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0861 b84e34fa2432598c94235c71f6baa1f2 254 Gene3D G3DSA:3.40.190.10 25 246 1.9E-75 T 23-10-2018 DLM_0861 b84e34fa2432598c94235c71f6baa1f2 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 247 4.0E-63 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_0861 b84e34fa2432598c94235c71f6baa1f2 254 SMART SM00062 23 250 1.3E-65 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_0861 b84e34fa2432598c94235c71f6baa1f2 254 Gene3D G3DSA:3.40.190.10 109 207 1.9E-75 T 23-10-2018 DLM_0861 b84e34fa2432598c94235c71f6baa1f2 254 SUPERFAMILY SSF53850 1 251 1.32E-68 T 23-10-2018 DLM_3277 610ff483970976b80c8275d0afc4a9b0 644 Gene3D G3DSA:1.10.287.950 324 644 7.2E-68 T 23-10-2018 DLM_3277 610ff483970976b80c8275d0afc4a9b0 644 SMART SM00283 382 643 1.1E-68 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3277 610ff483970976b80c8275d0afc4a9b0 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 610 1.4E-44 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3277 610ff483970976b80c8275d0afc4a9b0 644 SUPERFAMILY SSF58104 350 644 2.88E-67 T 23-10-2018 DLM_3590 7be738d6023e7876651dd19e8debc086 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 71.881 T 23-10-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 DLM_3590 7be738d6023e7876651dd19e8debc086 382 Pfam PF13378 Enolase C-terminal domain-like 136 355 8.7E-57 T 23-10-2018 IPR029065 Enolase C-terminal domain-like DLM_3590 7be738d6023e7876651dd19e8debc086 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 1.6E-25 T 23-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DLM_3590 7be738d6023e7876651dd19e8debc086 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 23-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DLM_3590 7be738d6023e7876651dd19e8debc086 382 SUPERFAMILY SSF54826 1 112 7.55E-30 T 23-10-2018 DLM_3590 7be738d6023e7876651dd19e8debc086 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 23-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DLM_3590 7be738d6023e7876651dd19e8debc086 382 SUPERFAMILY SSF51604 95 357 2.36E-70 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_3590 7be738d6023e7876651dd19e8debc086 382 Gene3D G3DSA:3.20.20.120 102 344 1.9E-145 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_3590 7be738d6023e7876651dd19e8debc086 382 Gene3D G3DSA:3.30.390.10 11 374 1.9E-145 T 23-10-2018 IPR029017 Enolase-like, N-terminal DLM_3590 7be738d6023e7876651dd19e8debc086 382 SMART SM00922 125 230 1.6E-15 T 23-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DLM_4144 00c14c1b80ff07be3a49c8206699e20f 207 Pfam PF01081 KDPG and KHG aldolase 6 198 1.3E-71 T 23-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DLM_4144 00c14c1b80ff07be3a49c8206699e20f 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 23-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DLM_4144 00c14c1b80ff07be3a49c8206699e20f 207 SUPERFAMILY SSF51569 2 204 2.2E-68 T 23-10-2018 DLM_4144 00c14c1b80ff07be3a49c8206699e20f 207 Gene3D G3DSA:3.20.20.70 2 207 5.2E-75 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_4144 00c14c1b80ff07be3a49c8206699e20f 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 23-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DLM_4144 00c14c1b80ff07be3a49c8206699e20f 207 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 204 1.7E-77 T 23-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DLM_4398 34f2dfb3b8081d133290cae1bf1c0ebe 112 SUPERFAMILY SSF54686 2 109 1.02E-46 T 23-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4398 34f2dfb3b8081d133290cae1bf1c0ebe 112 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 33 44 - T 23-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4398 34f2dfb3b8081d133290cae1bf1c0ebe 112 Pfam PF00252 Ribosomal protein L16p/L10e 2 106 4.3E-42 T 23-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DLM_4398 34f2dfb3b8081d133290cae1bf1c0ebe 112 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 1 101 4.3E-48 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4398 34f2dfb3b8081d133290cae1bf1c0ebe 112 Gene3D G3DSA:3.90.1170.10 1 112 1.2E-47 T 23-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4398 34f2dfb3b8081d133290cae1bf1c0ebe 112 PRINTS PR00060 Ribosomal protein L16 signature 62 91 2.1E-32 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4398 34f2dfb3b8081d133290cae1bf1c0ebe 112 PRINTS PR00060 Ribosomal protein L16 signature 32 61 2.1E-32 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4398 34f2dfb3b8081d133290cae1bf1c0ebe 112 PRINTS PR00060 Ribosomal protein L16 signature 16 27 2.1E-32 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0661 fef56bcccf00d825df92c54759998710 775 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 132 235 5.2E-13 T 23-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0661 fef56bcccf00d825df92c54759998710 775 Gene3D G3DSA:1.10.1060.10 333 411 5.1E-10 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_0661 fef56bcccf00d825df92c54759998710 775 Pfam PF13375 RnfC Barrel sandwich hybrid domain 15 96 3.5E-10 T 23-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain DLM_0661 fef56bcccf00d825df92c54759998710 775 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 382 393 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0661 fef56bcccf00d825df92c54759998710 775 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 343 354 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0661 fef56bcccf00d825df92c54759998710 775 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 768 77.355 T 23-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 DLM_0661 fef56bcccf00d825df92c54759998710 775 SUPERFAMILY SSF46548 339 406 3.92E-12 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_0661 fef56bcccf00d825df92c54759998710 775 SUPERFAMILY SSF142019 138 271 6.54E-9 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1040 918b2a31096930991c60791a9802066f 346 Hamap MF_00625 Selenide, water dikinase [selD]. 3 346 42.855 T 23-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 DLM_1040 918b2a31096930991c60791a9802066f 346 TIGRFAM TIGR00476 selD: selenide, water dikinase 5 315 1.8E-130 T 23-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 DLM_1040 918b2a31096930991c60791a9802066f 346 SUPERFAMILY SSF56042 162 341 5.98E-46 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_1040 918b2a31096930991c60791a9802066f 346 Gene3D G3DSA:3.90.650.10 162 345 8.3E-51 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_1040 918b2a31096930991c60791a9802066f 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 341 1.9E-28 T 23-10-2018 IPR010918 PurM-like, C-terminal domain DLM_1040 918b2a31096930991c60791a9802066f 346 PIRSF PIRSF036407 1 345 5.2E-114 T 23-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 DLM_1040 918b2a31096930991c60791a9802066f 346 SUPERFAMILY SSF55326 5 159 1.7E-41 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_1040 918b2a31096930991c60791a9802066f 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 155 3.2E-19 T 23-10-2018 IPR016188 PurM-like, N-terminal domain DLM_1040 918b2a31096930991c60791a9802066f 346 Gene3D G3DSA:3.30.1330.10 1 160 1.3E-49 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_2584 5519dc854846d8be8cfe80ca556ebc6b 446 SUPERFAMILY SSF54862 82 325 3.85E-30 T 23-10-2018 DLM_2584 5519dc854846d8be8cfe80ca556ebc6b 446 Pfam PF12801 4Fe-4S binding domain 72 112 9.2E-9 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_2584 5519dc854846d8be8cfe80ca556ebc6b 446 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 243 254 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_2584 5519dc854846d8be8cfe80ca556ebc6b 446 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 329 445 1.3E-24 T 23-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain DLM_2584 5519dc854846d8be8cfe80ca556ebc6b 446 Pfam PF13746 4Fe-4S dicluster domain 196 296 1.1E-37 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_2584 5519dc854846d8be8cfe80ca556ebc6b 446 Gene3D G3DSA:3.30.70.20 194 266 3.0E-6 T 23-10-2018 DLM_2584 5519dc854846d8be8cfe80ca556ebc6b 446 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 18 444 7.8E-143 T 23-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 DLM_2584 5519dc854846d8be8cfe80ca556ebc6b 446 Gene3D G3DSA:2.60.40.10 329 446 1.9E-24 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_0761 f38d90b0b5d7f07b5f695b88c5cb1085 633 Pfam PF09299 Mu transposase, C-terminal 399 458 7.3E-16 T 23-10-2018 IPR015378 Transposase-like, Mu, C-terminal DLM_0761 f38d90b0b5d7f07b5f695b88c5cb1085 633 Gene3D G3DSA:3.30.420.10 193 393 2.6E-19 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0761 f38d90b0b5d7f07b5f695b88c5cb1085 633 SUPERFAMILY SSF53098 197 383 1.12E-19 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0761 f38d90b0b5d7f07b5f695b88c5cb1085 633 Pfam PF00665 Integrase core domain 198 308 7.4E-14 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_0761 f38d90b0b5d7f07b5f695b88c5cb1085 633 SUPERFAMILY SSF50610 402 462 3.92E-7 T 23-10-2018 IPR009004 Transposase, Mu, C-terminal DLM_3947 aaf36f94d486e295e48b04193bd15e42 173 SUPERFAMILY SSF55729 3 165 7.2E-36 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3947 aaf36f94d486e295e48b04193bd15e42 173 Gene3D G3DSA:3.40.630.30 1 168 1.4E-51 T 23-10-2018 DLM_3947 aaf36f94d486e295e48b04193bd15e42 173 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 3.4E-16 T 23-10-2018 DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 Gene3D G3DSA:3.40.190.10 103 288 1.9E-56 T 23-10-2018 DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 Pfam PF03466 LysR substrate binding domain 92 291 5.3E-38 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 Gene3D G3DSA:1.10.10.10 7 96 3.0E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 SUPERFAMILY SSF46785 2 85 2.51E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 SUPERFAMILY SSF53850 93 295 4.52E-38 T 23-10-2018 DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 8.7E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 Gene3D G3DSA:3.40.190.10 163 262 1.9E-56 T 23-10-2018 DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0151 f099476a5a997e00e7eea77d57dd262d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4558 d7aff6306a9dcf7d8ae6f3efd4e0650d 340 Pfam PF13186 Iron-sulfur cluster-binding domain 245 311 1.3E-12 T 23-10-2018 IPR023885 4Fe4S-binding SPASM domain DLM_4558 d7aff6306a9dcf7d8ae6f3efd4e0650d 340 SUPERFAMILY SSF102114 26 317 5.49E-45 T 23-10-2018 DLM_4558 d7aff6306a9dcf7d8ae6f3efd4e0650d 340 Pfam PF04055 Radical SAM superfamily 33 182 2.8E-15 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 406 437 8.9E-5 T 23-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 Pfam PF13432 Tetratricopeptide repeat 11 72 2.3E-7 T 23-10-2018 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 Pfam PF13432 Tetratricopeptide repeat 148 195 6.7E-5 T 23-10-2018 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 Pfam PF07719 Tetratricopeptide repeat 108 141 3.7E-5 T 23-10-2018 IPR013105 Tetratricopeptide repeat 2 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 Gene3D G3DSA:3.40.50.2000 359 464 6.1E-9 T 23-10-2018 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 SUPERFAMILY SSF53756 230 485 1.69E-21 T 23-10-2018 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 Gene3D G3DSA:1.25.40.10 1 105 2.0E-21 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 SMART SM00028 142 175 0.25 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 SMART SM00028 40 73 0.011 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 SMART SM00028 6 39 260.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 SMART SM00028 74 107 3.6E-4 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 SMART SM00028 108 141 5.1E-5 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 Gene3D G3DSA:1.25.40.10 106 257 6.5E-19 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_2777 eb76b094d46654ac2fd4b181de2a6da3 494 SUPERFAMILY SSF48452 37 200 1.18E-36 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 Gene3D G3DSA:3.40.50.300 946 1141 1.0E-29 T 23-10-2018 DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 Gene3D G3DSA:3.40.960.10 1169 1272 2.6E-16 T 23-10-2018 DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 Pfam PF13086 AAA domain 862 904 2.2E-9 T 23-10-2018 DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 Pfam PF13087 AAA domain 924 1124 2.2E-17 T 23-10-2018 DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 SUPERFAMILY SSF52980 1161 1277 9.12E-18 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 Pfam PF11784 Protein of unknown function (DUF3320) 1361 1408 4.4E-19 T 23-10-2018 IPR021754 Protein of unknown function DUF3320 DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 SUPERFAMILY SSF52540 20 1154 3.73E-38 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 Gene3D G3DSA:3.40.50.300 18 139 6.8E-12 T 23-10-2018 DLM_4097 0590fd3934129378c3a65f0557af76b2 1505 Gene3D G3DSA:3.40.50.300 734 927 3.2E-18 T 23-10-2018 DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 SUPERFAMILY SSF56770 6 276 1.7E-72 T 23-10-2018 DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 PIRSF PIRSF000310 1 324 1.3E-82 T 23-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 250 263 1.7E-9 T 23-10-2018 DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 223 249 1.7E-9 T 23-10-2018 DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 115 139 1.7E-9 T 23-10-2018 DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 1 23 1.7E-9 T 23-10-2018 DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 Gene3D G3DSA:3.40.50.700 1 197 3.8E-50 T 23-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 16 176 8.6E-29 T 23-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 Gene3D G3DSA:4.10.480.10 198 278 1.5E-17 T 23-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DLM_2347 b9223f56aad2fff6ad88a0531bcebdfe 333 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 200 273 1.5E-20 T 23-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DLM_2278 f78b5aa2901de319464b876d7057cc4d 268 SUPERFAMILY SSF56317 1 266 7.19E-77 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_2278 f78b5aa2901de319464b876d7057cc4d 268 Gene3D G3DSA:3.60.110.10 1 267 1.8E-85 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_2278 f78b5aa2901de319464b876d7057cc4d 268 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 23-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DLM_2278 f78b5aa2901de319464b876d7057cc4d 268 Pfam PF00795 Carbon-nitrogen hydrolase 7 257 3.8E-54 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DLM_1692 2a595ec80045a0b4e06c0f4ed30a62ee 343 PRINTS PR01270 Histone deacetylase superfamily signature 274 284 6.1E-14 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1692 2a595ec80045a0b4e06c0f4ed30a62ee 343 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 6.1E-14 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1692 2a595ec80045a0b4e06c0f4ed30a62ee 343 PRINTS PR01270 Histone deacetylase superfamily signature 188 203 6.1E-14 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1692 2a595ec80045a0b4e06c0f4ed30a62ee 343 Pfam PF00850 Histone deacetylase domain 27 336 1.5E-63 T 23-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_1692 2a595ec80045a0b4e06c0f4ed30a62ee 343 SUPERFAMILY SSF52768 3 341 1.29E-83 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily DLM_1692 2a595ec80045a0b4e06c0f4ed30a62ee 343 Gene3D G3DSA:3.40.800.20 1 341 4.9E-114 T 23-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_4269 0e7bba27b2174d7f405b9820f02f5e83 430 SMART SM00267 334 430 8.4E-7 T 23-10-2018 IPR000160 GGDEF domain DLM_4269 0e7bba27b2174d7f405b9820f02f5e83 430 SUPERFAMILY SSF55073 350 425 9.42E-25 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4269 0e7bba27b2174d7f405b9820f02f5e83 430 Gene3D G3DSA:3.30.450.350 75 222 3.8E-6 T 23-10-2018 DLM_4269 0e7bba27b2174d7f405b9820f02f5e83 430 Pfam PF03924 CHASE domain 78 206 1.5E-15 T 23-10-2018 IPR006189 CHASE domain DLM_4269 0e7bba27b2174d7f405b9820f02f5e83 430 Gene3D G3DSA:3.30.70.270 332 427 5.8E-32 T 23-10-2018 DLM_4269 0e7bba27b2174d7f405b9820f02f5e83 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 344 425 4.8E-25 T 23-10-2018 IPR000160 GGDEF domain DLM_4269 0e7bba27b2174d7f405b9820f02f5e83 430 SMART SM01079 72 258 4.5E-4 T 23-10-2018 IPR006189 CHASE domain DLM_4269 0e7bba27b2174d7f405b9820f02f5e83 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 345 425 1.0E-28 T 23-10-2018 IPR000160 GGDEF domain DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 449 2.4E-63 T 23-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 PIRSF PIRSF000538 3 498 2.0E-180 T 23-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 Hamap MF_00186 Glycerol kinase [glpK]. 3 496 58.422 T 23-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 251 1.0E-84 T 23-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 23-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 495 7.5E-224 T 23-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 Gene3D G3DSA:3.30.420.40 1 252 7.9E-111 T 23-10-2018 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 SUPERFAMILY SSF53067 254 495 3.02E-81 T 23-10-2018 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 Gene3D G3DSA:3.30.420.40 253 498 1.6E-86 T 23-10-2018 DLM_3908 3f314fbba50e4bbcfe433d9a25732bb6 498 SUPERFAMILY SSF53067 5 254 5.0E-98 T 23-10-2018 DLM_1197 283b0d0b7fe30528bd353fbe7908bd52 745 SUPERFAMILY SSF52540 43 386 1.37E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1197 283b0d0b7fe30528bd353fbe7908bd52 745 SMART SM00490 295 383 3.4E-8 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1197 283b0d0b7fe30528bd353fbe7908bd52 745 Pfam PF00271 Helicase conserved C-terminal domain 274 382 9.0E-14 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1197 283b0d0b7fe30528bd353fbe7908bd52 745 Pfam PF00270 DEAD/DEAH box helicase 30 198 2.3E-24 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_1197 283b0d0b7fe30528bd353fbe7908bd52 745 Gene3D G3DSA:3.40.50.300 7 217 1.1E-39 T 23-10-2018 DLM_1197 283b0d0b7fe30528bd353fbe7908bd52 745 Gene3D G3DSA:3.40.50.300 261 398 7.1E-17 T 23-10-2018 DLM_1197 283b0d0b7fe30528bd353fbe7908bd52 745 SMART SM00487 24 228 3.8E-27 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_2963 9cef4546d68dfb9981b43e7fdbce5657 331 Gene3D G3DSA:1.10.3470.10 21 327 4.8E-77 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_2963 9cef4546d68dfb9981b43e7fdbce5657 331 Pfam PF01032 FecCD transport family 47 323 3.0E-72 T 23-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DLM_2963 9cef4546d68dfb9981b43e7fdbce5657 331 SUPERFAMILY SSF81345 19 323 5.62E-66 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_1134 a5ecfb98009aa352aa09ba983c125685 124 Pfam PF07007 Lysozyme inhibitor LprI 32 103 2.2E-12 T 23-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal DLM_1134 a5ecfb98009aa352aa09ba983c125685 124 Gene3D G3DSA:1.20.1270.180 15 118 2.8E-10 T 23-10-2018 DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 SUPERFAMILY SSF53850 90 292 1.17E-28 T 23-10-2018 DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 Pfam PF03466 LysR substrate binding domain 90 292 3.3E-27 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 SUPERFAMILY SSF46785 1 110 9.29E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.3E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.3E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.3E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 Gene3D G3DSA:3.40.190.10 93 282 2.3E-42 T 23-10-2018 DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 Gene3D G3DSA:1.10.10.10 1 89 2.7E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.1E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2053 429f9eed15246adc230f12f7f7200e7c 304 Gene3D G3DSA:3.40.190.10 166 265 2.3E-42 T 23-10-2018 DLM_0625 59dfaebe439dc0bdbeb28f6a5a036fb6 503 Gene3D G3DSA:1.20.1740.10 11 481 2.9E-52 T 23-10-2018 DLM_0625 59dfaebe439dc0bdbeb28f6a5a036fb6 503 Pfam PF13520 Amino acid permease 21 429 2.7E-36 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_0625 59dfaebe439dc0bdbeb28f6a5a036fb6 503 PIRSF PIRSF006060 1 480 5.9E-68 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 Pfam PF02378 Phosphotransferase system, EIIC 105 386 9.2E-25 T 23-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 SUPERFAMILY SSF51261 461 611 3.49E-44 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 467 584 3.9E-36 T 23-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 Pfam PF00367 phosphotransferase system, EIIB 8 37 1.3E-13 T 23-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 SUPERFAMILY SSF55604 3 77 1.44E-20 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 Gene3D G3DSA:2.70.70.10 456 610 3.8E-44 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 466 587 1.6E-40 T 23-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 17 34 - T 23-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 529 541 - T 23-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 Gene3D G3DSA:3.30.1360.60 1 75 2.3E-25 T 23-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DLM_3115 c6572b3dd2bfd05717b8b8eff9e32a63 620 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 2 609 2.5E-203 T 23-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 DLM_2764 35d559552600b3313be4beb2396fb45b 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 271 - T 23-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2764 35d559552600b3313be4beb2396fb45b 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 27 453 1.0E-80 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2764 35d559552600b3313be4beb2396fb45b 475 SUPERFAMILY SSF81442 22 470 2.09E-84 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2764 35d559552600b3313be4beb2396fb45b 475 Gene3D G3DSA:1.20.210.10 2 475 6.8E-125 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3502 17e01428b6d161dea9f55333f3ac621f 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.4E-40 T 23-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3502 17e01428b6d161dea9f55333f3ac621f 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3502 17e01428b6d161dea9f55333f3ac621f 103 SUPERFAMILY SSF141091 1 101 9.42E-39 T 23-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3502 17e01428b6d161dea9f55333f3ac621f 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.1E-37 T 23-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3502 17e01428b6d161dea9f55333f3ac621f 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.171 T 23-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4379 0b12caef9505d87ec698e116a3046895 143 Gene3D G3DSA:1.10.10.2720 73 143 4.0E-28 T 23-10-2018 DLM_4379 0b12caef9505d87ec698e116a3046895 143 SMART SM00649 9 141 7.9E-87 T 23-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DLM_4379 0b12caef9505d87ec698e116a3046895 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 23-10-2018 IPR020784 Ribosomal protein L11, N-terminal DLM_4379 0b12caef9505d87ec698e116a3046895 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.874 T 23-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DLM_4379 0b12caef9505d87ec698e116a3046895 143 Gene3D G3DSA:3.30.1550.10 2 72 1.3E-35 T 23-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DLM_4379 0b12caef9505d87ec698e116a3046895 143 SUPERFAMILY SSF54747 3 73 1.44E-30 T 23-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DLM_4379 0b12caef9505d87ec698e116a3046895 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.1E-66 T 23-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4379 0b12caef9505d87ec698e116a3046895 143 SUPERFAMILY SSF46906 68 141 6.54E-27 T 23-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DLM_4379 0b12caef9505d87ec698e116a3046895 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-16 T 23-10-2018 DLM_4379 0b12caef9505d87ec698e116a3046895 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 23-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4379 0b12caef9505d87ec698e116a3046895 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.4E-25 T 23-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DLM_2431 5a7f730cfb9409ca5b6c303e62776081 447 Gene3D G3DSA:3.30.9.10 144 366 9.2E-76 T 23-10-2018 DLM_2431 5a7f730cfb9409ca5b6c303e62776081 447 SUPERFAMILY SSF51905 52 435 4.79E-44 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2431 5a7f730cfb9409ca5b6c303e62776081 447 Pfam PF01266 FAD dependent oxidoreductase 53 403 1.3E-59 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_2431 5a7f730cfb9409ca5b6c303e62776081 447 Gene3D G3DSA:3.50.50.60 53 405 9.2E-76 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 Pfam PF04073 Aminoacyl-tRNA editing domain 321 435 4.3E-27 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 Gene3D G3DSA:3.40.50.800 68 613 5.2E-237 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 Gene3D G3DSA:3.30.930.10 75 526 5.2E-237 T 23-10-2018 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 Gene3D G3DSA:3.90.960.10 304 450 5.2E-237 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 SUPERFAMILY SSF55681 74 539 6.57E-101 T 23-10-2018 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 Hamap MF_01569 Proline--tRNA ligase [proS]. 65 632 40.633 T 23-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 65 627 9.3E-231 T 23-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 Pfam PF03129 Anticodon binding domain 537 627 5.5E-16 T 23-10-2018 IPR004154 Anticodon-binding DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 SUPERFAMILY SSF52954 524 631 9.0E-28 T 23-10-2018 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 159 520 1.1E-44 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 PRINTS PR01046 Prolyl-tRNA synthetase signature 132 150 5.3E-18 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 PRINTS PR01046 Prolyl-tRNA synthetase signature 208 219 5.3E-18 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 PRINTS PR01046 Prolyl-tRNA synthetase signature 198 206 5.3E-18 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 PRINTS PR01046 Prolyl-tRNA synthetase signature 168 179 5.3E-18 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DLM_3741 2cf0e8d591ffab6855db6437480116ae 632 SUPERFAMILY SSF55826 282 451 3.53E-32 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_1294 0fb98b09394ea8bdabc33a6d4f7e070c 270 Gene3D G3DSA:3.30.420.10 101 263 6.7E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1294 0fb98b09394ea8bdabc33a6d4f7e070c 270 Pfam PF00665 Integrase core domain 103 217 8.1E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_1294 0fb98b09394ea8bdabc33a6d4f7e070c 270 SUPERFAMILY SSF53098 96 261 3.03E-41 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1294 0fb98b09394ea8bdabc33a6d4f7e070c 270 Pfam PF13276 HTH-like domain 22 75 1.0E-16 T 23-10-2018 IPR025948 HTH-like domain DLM_0335 0fb98b09394ea8bdabc33a6d4f7e070c 270 Gene3D G3DSA:3.30.420.10 101 263 6.7E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0335 0fb98b09394ea8bdabc33a6d4f7e070c 270 Pfam PF00665 Integrase core domain 103 217 8.1E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_0335 0fb98b09394ea8bdabc33a6d4f7e070c 270 SUPERFAMILY SSF53098 96 261 3.03E-41 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0335 0fb98b09394ea8bdabc33a6d4f7e070c 270 Pfam PF13276 HTH-like domain 22 75 1.0E-16 T 23-10-2018 IPR025948 HTH-like domain DLM_0820 2e3b5ed7f1c4aa728a75bebd2a2896f3 228 SMART SM00382 33 221 2.9E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0820 2e3b5ed7f1c4aa728a75bebd2a2896f3 228 Gene3D G3DSA:3.40.50.300 1 226 7.8E-66 T 23-10-2018 DLM_0820 2e3b5ed7f1c4aa728a75bebd2a2896f3 228 SUPERFAMILY SSF52540 4 224 2.47E-69 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0820 2e3b5ed7f1c4aa728a75bebd2a2896f3 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.3E-101 T 23-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 DLM_0820 2e3b5ed7f1c4aa728a75bebd2a2896f3 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0820 2e3b5ed7f1c4aa728a75bebd2a2896f3 228 Pfam PF00005 ABC transporter 24 172 4.2E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 PRINTS PR00471 Acetate kinase family signature 374 386 1.6E-42 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 PRINTS PR00471 Acetate kinase family signature 200 221 1.6E-42 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 PRINTS PR00471 Acetate kinase family signature 5 16 1.6E-42 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 PRINTS PR00471 Acetate kinase family signature 170 183 1.6E-42 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 PRINTS PR00471 Acetate kinase family signature 297 310 1.6E-42 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 PRINTS PR00471 Acetate kinase family signature 319 335 1.6E-42 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 200 217 - T 23-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 Gene3D G3DSA:3.30.420.40 193 395 2.4E-75 T 23-10-2018 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 392 1.1E-150 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 Gene3D G3DSA:3.30.420.40 3 192 2.5E-72 T 23-10-2018 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 PIRSF PIRSF000722 1 395 4.4E-145 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 Pfam PF00871 Acetokinase family 5 386 7.1E-147 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 SUPERFAMILY SSF53067 4 193 5.61E-68 T 23-10-2018 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 23-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 Hamap MF_00020 Acetate kinase [ackA]. 1 396 179.742 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_1459 ecfba4be98990a6eaf3048d6862353e8 397 SUPERFAMILY SSF53067 154 392 6.66E-85 T 23-10-2018 DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 SUPERFAMILY SSF64288 63 237 2.04E-41 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 1.1E-17 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 Gene3D G3DSA:3.40.1410.10 94 229 4.0E-34 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 SMART SM00866 96 233 9.7E-34 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 SMART SM00345 16 75 5.1E-17 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 Pfam PF07702 UTRA domain 96 233 1.1E-34 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 SUPERFAMILY SSF46785 8 79 3.74E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 Gene3D G3DSA:1.10.10.10 8 76 1.5E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 6.7E-8 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 6.7E-8 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_3931 1ae44b07d3fae1fbf485ce0bf24b08d9 242 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 11 237 6.2E-88 T 23-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 DLM_1835 a1d073b85ef043e1ebd1b8f9ed922dfb 418 Gene3D G3DSA:3.40.50.300 222 411 2.6E-47 T 23-10-2018 DLM_1835 a1d073b85ef043e1ebd1b8f9ed922dfb 418 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 159 167 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DLM_1835 a1d073b85ef043e1ebd1b8f9ed922dfb 418 SMART SM00490 264 345 1.4E-30 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1835 a1d073b85ef043e1ebd1b8f9ed922dfb 418 Gene3D G3DSA:3.40.50.300 2 216 5.8E-72 T 23-10-2018 DLM_1835 a1d073b85ef043e1ebd1b8f9ed922dfb 418 SUPERFAMILY SSF52540 81 367 3.23E-69 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1835 a1d073b85ef043e1ebd1b8f9ed922dfb 418 Pfam PF00271 Helicase conserved C-terminal domain 241 345 1.7E-27 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1835 a1d073b85ef043e1ebd1b8f9ed922dfb 418 Pfam PF00270 DEAD/DEAH box helicase 31 199 6.3E-45 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_1835 a1d073b85ef043e1ebd1b8f9ed922dfb 418 SMART SM00487 25 228 1.9E-52 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_3385 b050f504c8356653f18ab93cfd88c375 472 Gene3D G3DSA:1.10.1060.10 7 146 2.6E-33 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 148 458 6.5E-25 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 Gene3D G3DSA:3.40.50.720 147 255 2.1E-19 T 23-10-2018 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 Gene3D G3DSA:3.50.50.60 256 399 2.0E-40 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3385 b050f504c8356653f18ab93cfd88c375 472 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 3.1E-35 T 23-10-2018 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 PRINTS PR00419 Adrenodoxin reductase family signature 214 224 3.1E-35 T 23-10-2018 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 3.1E-35 T 23-10-2018 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 3.1E-35 T 23-10-2018 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 3.1E-35 T 23-10-2018 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 SUPERFAMILY SSF51971 147 400 1.82E-66 T 23-10-2018 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 SUPERFAMILY SSF46548 6 158 7.85E-39 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 135 4.2E-38 T 23-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DLM_3385 b050f504c8356653f18ab93cfd88c375 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 1.9E-227 T 23-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 DLM_2310 61b43edaa561d1e3bcd033f0121f17f9 262 Gene3D G3DSA:1.10.4030.30 24 82 2.1E-6 T 23-10-2018 DLM_2310 61b43edaa561d1e3bcd033f0121f17f9 262 Pfam PF13624 SurA N-terminal domain 21 124 2.7E-8 T 23-10-2018 DLM_2310 61b43edaa561d1e3bcd033f0121f17f9 262 SUPERFAMILY SSF54534 135 227 7.2E-22 T 23-10-2018 DLM_2310 61b43edaa561d1e3bcd033f0121f17f9 262 SUPERFAMILY SSF109998 24 162 5.49E-19 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily DLM_2310 61b43edaa561d1e3bcd033f0121f17f9 262 Pfam PF13145 PPIC-type PPIASE domain 113 237 1.8E-16 T 23-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DLM_2310 61b43edaa561d1e3bcd033f0121f17f9 262 Gene3D G3DSA:3.10.50.40 123 251 6.4E-25 T 23-10-2018 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 Pfam PF00072 Response regulator receiver domain 7 113 3.6E-16 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 179 7.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 167 7.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 151 7.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 Gene3D G3DSA:1.10.10.10 136 198 7.9E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 189 1.7E-16 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 SMART SM00421 134 191 2.0E-18 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 SUPERFAMILY SSF52172 4 125 2.85E-21 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 SMART SM00448 4 113 3.0E-11 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 Gene3D G3DSA:3.40.50.2300 2 135 1.8E-20 T 23-10-2018 DLM_1948 a67c4a8f0f1b4aa89c417a5166a8e1d5 201 SUPERFAMILY SSF46894 130 197 1.09E-18 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 Gene3D G3DSA:3.40.50.300 4 221 2.1E-63 T 23-10-2018 DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 SMART SM00382 28 211 1.4E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 Gene3D G3DSA:2.40.50.140 288 348 4.8E-27 T 23-10-2018 DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 SUPERFAMILY SSF52540 5 242 2.66E-83 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 Pfam PF08402 TOBE domain 282 356 7.9E-9 T 23-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 Pfam PF00005 ABC transporter 20 161 5.6E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 Gene3D G3DSA:2.40.50.940 222 357 4.8E-27 T 23-10-2018 DLM_2786 0e94f4ddbeaf97593fa923789f62111a 377 SUPERFAMILY SSF50331 236 364 8.5E-23 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_1907 513ee1d83f82ddbd660bf47e8a4593de 178 Pfam PF00005 ABC transporter 1 119 5.8E-18 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1907 513ee1d83f82ddbd660bf47e8a4593de 178 Gene3D G3DSA:3.40.50.300 1 175 1.9E-41 T 23-10-2018 DLM_1907 513ee1d83f82ddbd660bf47e8a4593de 178 SUPERFAMILY SSF52540 1 168 3.01E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 PIRSF PIRSF036483 2 404 4.9E-126 T 23-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 Gene3D G3DSA:3.40.50.450 6 395 1.7E-121 T 23-10-2018 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 394 37.473 T 23-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 Pfam PF00365 Phosphofructokinase 9 320 9.6E-50 T 23-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 SUPERFAMILY SSF53784 5 401 1.96E-97 T 23-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 33 46 4.7E-23 T 23-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 101 117 4.7E-23 T 23-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 232 244 4.7E-23 T 23-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 4.7E-23 T 23-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 4.7E-23 T 23-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 174 190 4.7E-23 T 23-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DLM_0690 eb68d23254240ef7bff1a599b76d9b39 405 Gene3D G3DSA:3.40.50.460 139 382 1.7E-121 T 23-10-2018 DLM_3274 45483cb325e9cbef2d931ec315b036b6 487 Pfam PF00171 Aldehyde dehydrogenase family 24 475 1.3E-168 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_3274 45483cb325e9cbef2d931ec315b036b6 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_3274 45483cb325e9cbef2d931ec315b036b6 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_3274 45483cb325e9cbef2d931ec315b036b6 487 SUPERFAMILY SSF53720 6 479 6.68E-160 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_3274 45483cb325e9cbef2d931ec315b036b6 487 Gene3D G3DSA:3.40.309.10 251 482 1.6E-77 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_3274 45483cb325e9cbef2d931ec315b036b6 487 Gene3D G3DSA:3.40.605.10 2 250 6.4E-90 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_2908 cadd090e116f39396f0c5adda20c85cc 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 51.56 T 23-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DLM_2908 cadd090e116f39396f0c5adda20c85cc 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 274 4.6E-121 T 23-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DLM_2908 cadd090e116f39396f0c5adda20c85cc 283 Pfam PF00793 DAHP synthetase I family 8 274 3.9E-66 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DLM_2908 cadd090e116f39396f0c5adda20c85cc 283 Gene3D G3DSA:3.20.20.70 2 280 6.7E-101 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2908 cadd090e116f39396f0c5adda20c85cc 283 SUPERFAMILY SSF51569 2 275 3.21E-101 T 23-10-2018 DLM_1657 366540d490ce417dea3cf4a15cb4c22b 455 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 106 4.9E-19 T 23-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DLM_1657 366540d490ce417dea3cf4a15cb4c22b 455 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 230 445 2.0E-39 T 23-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 DLM_1875 da7884f627405d84aedba723351e8111 300 Gene3D G3DSA:1.10.10.10 1 82 2.5E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1875 da7884f627405d84aedba723351e8111 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.2E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1875 da7884f627405d84aedba723351e8111 300 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 293 6.8E-114 T 23-10-2018 IPR017685 HTH-type transcriptional regulator ArgP DLM_1875 da7884f627405d84aedba723351e8111 300 Pfam PF03466 LysR substrate binding domain 92 290 3.0E-13 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1875 da7884f627405d84aedba723351e8111 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1875 da7884f627405d84aedba723351e8111 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1875 da7884f627405d84aedba723351e8111 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1875 da7884f627405d84aedba723351e8111 300 SUPERFAMILY SSF46785 2 111 5.99E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1875 da7884f627405d84aedba723351e8111 300 SUPERFAMILY SSF53850 92 291 1.09E-20 T 23-10-2018 DLM_1875 da7884f627405d84aedba723351e8111 300 Gene3D G3DSA:3.40.190.290 88 295 2.1E-72 T 23-10-2018 DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 Gene3D G3DSA:3.40.50.720 6 246 1.7E-73 T 23-10-2018 DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 SUPERFAMILY SSF51735 6 246 4.18E-67 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.2E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.2E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.2E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.1E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 6.1E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.1E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.1E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.1E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.1E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_1712 32a37e7849adaf424b5ddb55b790228f 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 5.4E-56 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 Pfam PF01814 Hemerythrin HHE cation binding domain 630 762 7.1E-16 T 23-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 Gene3D G3DSA:3.40.1110.10 320 442 5.1E-69 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 Pfam PF00122 E1-E2 ATPase 117 288 3.2E-38 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 Gene3D G3DSA:2.70.150.20 110 219 5.6E-25 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 Gene3D G3DSA:3.40.50.1000 290 563 5.1E-69 T 23-10-2018 IPR023214 HAD superfamily DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 SUPERFAMILY SSF81653 118 215 1.96E-19 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 SUPERFAMILY SSF81665 72 301 3.4E-9 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 446 9.0E-18 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 309 323 9.0E-18 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 165 179 9.0E-18 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 546 9.0E-18 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 529 9.0E-18 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 SUPERFAMILY SSF56784 307 611 6.79E-44 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 102 330 1.8E-29 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 420 589 7.3E-31 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 Gene3D G3DSA:1.20.120.520 617 765 5.5E-11 T 23-10-2018 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 65 612 2.9E-149 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 311 317 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DLM_1507 63a2a20e6800ce74d7da851d5219c748 765 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 524 6.6E-28 T 23-10-2018 DLM_3256 904d092acbfc48736446bdccd9c5a401 629 Pfam PF13183 4Fe-4S dicluster domain 241 329 7.6E-12 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_3256 904d092acbfc48736446bdccd9c5a401 629 Pfam PF11982 Domain of unknown function (DUF3483) 7 222 7.6E-71 T 23-10-2018 IPR021872 Protein of unknown function DUF3483 DLM_3256 904d092acbfc48736446bdccd9c5a401 629 Gene3D G3DSA:1.10.1060.10 227 348 2.4E-7 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_3256 904d092acbfc48736446bdccd9c5a401 629 SUPERFAMILY SSF46548 228 345 1.19E-18 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_3256 904d092acbfc48736446bdccd9c5a401 629 Pfam PF02754 Cysteine-rich domain 406 475 9.6E-7 T 23-10-2018 IPR004017 Cysteine-rich domain DLM_3256 904d092acbfc48736446bdccd9c5a401 629 Pfam PF02754 Cysteine-rich domain 522 607 3.3E-12 T 23-10-2018 IPR004017 Cysteine-rich domain DLM_3256 904d092acbfc48736446bdccd9c5a401 629 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 244 255 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_3256 904d092acbfc48736446bdccd9c5a401 629 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 317 328 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_2268 609efaff7b043d402efbb578f9f50126 433 Pfam PF00990 Diguanylate cyclase, GGDEF domain 264 420 2.0E-42 T 23-10-2018 IPR000160 GGDEF domain DLM_2268 609efaff7b043d402efbb578f9f50126 433 Gene3D G3DSA:3.30.70.270 258 425 2.6E-53 T 23-10-2018 DLM_2268 609efaff7b043d402efbb578f9f50126 433 SMART SM00267 253 424 1.6E-51 T 23-10-2018 IPR000160 GGDEF domain DLM_2268 609efaff7b043d402efbb578f9f50126 433 SUPERFAMILY SSF55073 269 423 2.98E-48 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2268 609efaff7b043d402efbb578f9f50126 433 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 423 6.5E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_4074 b1e5732c0fe8a1efa72cbfacfea9c3da 113 SUPERFAMILY SSF51182 20 113 1.75E-16 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_4074 b1e5732c0fe8a1efa72cbfacfea9c3da 113 Pfam PF05899 Protein of unknown function (DUF861) 41 109 2.1E-25 T 23-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 DLM_4074 b1e5732c0fe8a1efa72cbfacfea9c3da 113 Gene3D G3DSA:2.60.120.10 3 113 1.4E-26 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_4130 409890851abafa4c962f3fdb8a595813 460 Pfam PF00206 Lyase 9 303 5.0E-79 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00149 Fumarate lyase superfamily signature 278 294 6.9E-32 T 23-10-2018 IPR000362 Fumarate lyase family DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 6.9E-32 T 23-10-2018 IPR000362 Fumarate lyase family DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 6.9E-32 T 23-10-2018 IPR000362 Fumarate lyase family DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 6.9E-32 T 23-10-2018 IPR000362 Fumarate lyase family DLM_4130 409890851abafa4c962f3fdb8a595813 460 SUPERFAMILY SSF48557 7 458 5.97E-158 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 DLM_4130 409890851abafa4c962f3fdb8a595813 460 ProSitePatterns PS00163 Fumarate lyases signature. 278 287 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 2.0E-69 T 23-10-2018 DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 2.0E-69 T 23-10-2018 DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 2.0E-69 T 23-10-2018 DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 2.0E-69 T 23-10-2018 DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00145 Argininosuccinate lyase family signature 278 294 2.0E-69 T 23-10-2018 DLM_4130 409890851abafa4c962f3fdb8a595813 460 PRINTS PR00145 Argininosuccinate lyase family signature 234 258 2.0E-69 T 23-10-2018 DLM_4130 409890851abafa4c962f3fdb8a595813 460 Gene3D G3DSA:1.10.275.10 28 232 8.7E-193 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal DLM_4130 409890851abafa4c962f3fdb8a595813 460 Gene3D G3DSA:1.10.40.30 363 435 8.7E-193 T 23-10-2018 DLM_4130 409890851abafa4c962f3fdb8a595813 460 Pfam PF14698 Argininosuccinate lyase C-terminal 366 433 4.1E-25 T 23-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_4130 409890851abafa4c962f3fdb8a595813 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 5 456 44.524 T 23-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_4130 409890851abafa4c962f3fdb8a595813 460 Gene3D G3DSA:1.20.200.10 122 451 8.7E-193 T 23-10-2018 DLM_4130 409890851abafa4c962f3fdb8a595813 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 7 458 1.2E-193 T 23-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DLM_2954 fa9e943cbd5e0c8ad6916f7fd26c839c 148 Gene3D G3DSA:3.30.70.1150 50 133 3.5E-33 T 23-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DLM_2954 fa9e943cbd5e0c8ad6916f7fd26c839c 148 Pfam PF08753 NikR C terminal nickel binding domain 54 130 5.9E-28 T 23-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal DLM_2954 fa9e943cbd5e0c8ad6916f7fd26c839c 148 SUPERFAMILY SSF47598 1 43 1.11E-10 T 23-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DLM_2954 fa9e943cbd5e0c8ad6916f7fd26c839c 148 SUPERFAMILY SSF55021 51 132 9.84E-26 T 23-10-2018 DLM_2954 fa9e943cbd5e0c8ad6916f7fd26c839c 148 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 40 2.9E-10 T 23-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 DLM_2954 fa9e943cbd5e0c8ad6916f7fd26c839c 148 Hamap MF_00476 Nickel-responsive regulator [nikR]. 1 132 26.592 T 23-10-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 DLM_2954 fa9e943cbd5e0c8ad6916f7fd26c839c 148 Gene3D G3DSA:1.10.1220.10 1 46 1.2E-18 T 23-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DLM_1310 a11ac07775b8988bd796a803810e29da 308 Pfam PF13557 Putative MetA-pathway of phenol degradation 68 298 2.7E-40 T 23-10-2018 IPR025737 MetA-pathway of phenol degradation, putative DLM_0249 42392f9a7779a3f24f1731ac04901758 487 Gene3D G3DSA:3.40.50.10260 11 208 2.0E-51 T 23-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DLM_0249 42392f9a7779a3f24f1731ac04901758 487 Pfam PF01256 Carbohydrate kinase 236 463 1.0E-58 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DLM_0249 42392f9a7779a3f24f1731ac04901758 487 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 21 202 3.7E-27 T 23-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DLM_0249 42392f9a7779a3f24f1731ac04901758 487 Pfam PF03853 YjeF-related protein N-terminus 25 182 1.9E-39 T 23-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DLM_0249 42392f9a7779a3f24f1731ac04901758 487 PIRSF PIRSF017184 12 487 9.4E-116 T 23-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 DLM_0249 42392f9a7779a3f24f1731ac04901758 487 Gene3D G3DSA:3.40.1190.20 218 484 7.9E-76 T 23-10-2018 IPR029056 Ribokinase-like DLM_0249 42392f9a7779a3f24f1731ac04901758 487 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 203 19.104 T 23-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DLM_0249 42392f9a7779a3f24f1731ac04901758 487 SUPERFAMILY SSF53613 221 472 1.06E-65 T 23-10-2018 IPR029056 Ribokinase-like DLM_0249 42392f9a7779a3f24f1731ac04901758 487 SUPERFAMILY SSF64153 13 234 4.58E-53 T 23-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DLM_0249 42392f9a7779a3f24f1731ac04901758 487 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 220 471 8.0E-66 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DLM_0249 42392f9a7779a3f24f1731ac04901758 487 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 420 430 - T 23-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site DLM_0249 42392f9a7779a3f24f1731ac04901758 487 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 213 486 21.551 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DLM_2324 c3deba7e223c4179f696d87553e2e624 95 Pfam PF01381 Helix-turn-helix 26 69 7.7E-11 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2324 c3deba7e223c4179f696d87553e2e624 95 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 9 87 2.4E-27 T 23-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 DLM_2324 c3deba7e223c4179f696d87553e2e624 95 SUPERFAMILY SSF47413 13 90 2.22E-24 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_2324 c3deba7e223c4179f696d87553e2e624 95 SMART SM00530 17 73 2.8E-7 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2324 c3deba7e223c4179f696d87553e2e624 95 Gene3D G3DSA:1.10.260.40 6 95 7.7E-31 T 23-10-2018 DLM_1249 ebdabc10998d70c18fab0f0aa6bf8d6b 354 Pfam PF04865 Baseplate J-like protein 66 311 5.6E-55 T 23-10-2018 IPR006949 Baseplate protein J-like DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 324 330 - T 23-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 Pfam PF12833 Helix-turn-helix domain 110 187 1.5E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 Gene3D G3DSA:3.40.10.10 11 80 5.4E-31 T 23-10-2018 IPR035451 Ada-like domain superfamily DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 Pfam PF02805 Metal binding domain of Ada 16 79 2.4E-31 T 23-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 SMART SM00342 104 186 6.1E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 Gene3D G3DSA:1.10.10.60 141 184 1.5E-5 T 23-10-2018 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 Gene3D G3DSA:1.10.10.10 273 357 5.4E-35 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 Gene3D G3DSA:3.30.160.70 185 272 3.7E-32 T 23-10-2018 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 SUPERFAMILY SSF57884 11 95 4.45E-31 T 23-10-2018 IPR035451 Ada-like domain superfamily DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 SUPERFAMILY SSF46767 273 353 2.88E-30 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 274 353 1.7E-34 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 SUPERFAMILY SSF46689 90 137 9.67E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 PIRSF PIRSF000409 2 357 2.0E-138 T 23-10-2018 IPR016221 Bifunctional regulatory protein Ada DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 SUPERFAMILY SSF53155 193 272 9.42E-21 T 23-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 Gene3D G3DSA:1.10.10.60 84 140 4.3E-20 T 23-10-2018 DLM_0392 854a8ec6d7ee38b17d9a84a9a265429c 357 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 275 353 1.1E-32 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DLM_3057 6e6a3d0ce76ac2f9316c1cb7f408aa19 255 SUPERFAMILY SSF55781 72 249 7.19E-48 T 23-10-2018 DLM_3057 6e6a3d0ce76ac2f9316c1cb7f408aa19 255 Gene3D G3DSA:1.10.10.10 1 73 8.9E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3057 6e6a3d0ce76ac2f9316c1cb7f408aa19 255 Gene3D G3DSA:3.30.450.40 74 252 3.8E-59 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_3057 6e6a3d0ce76ac2f9316c1cb7f408aa19 255 Pfam PF09339 IclR helix-turn-helix domain 3 53 8.6E-15 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DLM_3057 6e6a3d0ce76ac2f9316c1cb7f408aa19 255 SMART SM00346 1 91 2.6E-27 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DLM_3057 6e6a3d0ce76ac2f9316c1cb7f408aa19 255 Pfam PF01614 Bacterial transcriptional regulator 121 245 2.3E-39 T 23-10-2018 IPR014757 Transcription regulator IclR, C-terminal DLM_3057 6e6a3d0ce76ac2f9316c1cb7f408aa19 255 SUPERFAMILY SSF46785 1 73 1.82E-13 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1388 9831aa626986138062822cfa454a8b32 253 Gene3D G3DSA:3.40.50.300 1 249 8.1E-65 T 23-10-2018 DLM_1388 9831aa626986138062822cfa454a8b32 253 Pfam PF00005 ABC transporter 21 178 6.8E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1388 9831aa626986138062822cfa454a8b32 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 1.2E-8 T 23-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DLM_1388 9831aa626986138062822cfa454a8b32 253 SMART SM00382 30 235 6.0E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1388 9831aa626986138062822cfa454a8b32 253 SUPERFAMILY SSF52540 4 249 1.41E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 Pfam PF00175 Oxidoreductase NAD-binding domain 106 195 3.0E-5 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 130 139 6.5E-31 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 181 189 6.5E-31 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 69 83 6.5E-31 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 83 97 6.5E-31 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 20 30 6.5E-31 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 105 124 6.5E-31 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 SUPERFAMILY SSF54292 204 309 1.1E-22 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 Hamap MF_02098 Carnitine monooxygenase reductase subunit. 1 309 80.22 T 23-10-2018 IPR039003 Carnitine monooxygenase reductase subunit GO:0009437 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 SUPERFAMILY SSF52343 91 218 6.68E-26 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 Gene3D G3DSA:2.40.30.10 1 94 1.0E-23 T 23-10-2018 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 SUPERFAMILY SSF63380 2 93 2.2E-20 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 229 300 1.4E-12 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 Gene3D G3DSA:3.40.50.80 95 213 3.6E-22 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 258 266 - T 23-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DLM_3014 98eae7f44fb9ba27df44c83da7e25162 309 Gene3D G3DSA:3.10.20.30 214 309 3.8E-23 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_3531 cf42b321e4424225c20522876c3b5430 207 PIRSF PIRSF016482 1 207 4.2E-57 T 23-10-2018 IPR007445 Pilus assembly protein, PilO DLM_3531 cf42b321e4424225c20522876c3b5430 207 Gene3D G3DSA:1.10.287.540 57 93 3.8E-8 T 23-10-2018 DLM_3531 cf42b321e4424225c20522876c3b5430 207 Pfam PF04350 Pilus assembly protein, PilO 49 192 4.9E-49 T 23-10-2018 IPR007445 Pilus assembly protein, PilO DLM_3531 cf42b321e4424225c20522876c3b5430 207 Gene3D G3DSA:3.30.70.60 94 200 1.2E-31 T 23-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 505 517 5.3E-27 T 23-10-2018 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 469 484 5.3E-27 T 23-10-2018 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 452 467 5.3E-27 T 23-10-2018 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 298 317 5.3E-27 T 23-10-2018 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 Gene3D G3DSA:3.50.30.10 7 238 4.6E-66 T 23-10-2018 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 Gene3D G3DSA:1.10.274.10 24 149 4.6E-66 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 Pfam PF00391 PEP-utilising enzyme, mobile domain 159 230 5.0E-20 T 23-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 SUPERFAMILY SSF51621 258 552 4.83E-98 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 570 4.0E-160 T 23-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 452 470 - T 23-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 4.1E-24 T 23-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 PIRSF PIRSF000732 1 577 6.7E-199 T 23-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 SUPERFAMILY SSF47831 30 146 1.11E-26 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 Gene3D G3DSA:3.20.20.60 239 576 1.6E-112 T 23-10-2018 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 SUPERFAMILY SSF52009 128 251 7.98E-29 T 23-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DLM_3543 fcaad9baba5f67f07df0dc429c730198 579 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 257 545 1.1E-103 T 23-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 SMART SM00487 461 641 1.7E-21 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 SUPERFAMILY SSF52540 452 668 5.85E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 Gene3D G3DSA:3.40.50.10810 466 669 6.3E-63 T 23-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 SUPERFAMILY SSF52540 669 902 3.15E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 Pfam PF00176 SNF2 family N-terminal domain 485 737 2.8E-57 T 23-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 Gene3D G3DSA:1.20.120.850 690 898 2.0E-78 T 23-10-2018 DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 Gene3D G3DSA:3.40.50.300 675 873 2.0E-78 T 23-10-2018 DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 Pfam PF00271 Helicase conserved C-terminal domain 748 859 5.2E-20 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_4002 4c51c2f7e44631f886e48aee396c3885 915 SMART SM00490 774 859 2.7E-21 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_1066 7b771441c49779906484e247e8f9eb54 702 Pfam PF01734 Patatin-like phospholipase 4 193 1.2E-27 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DLM_1066 7b771441c49779906484e247e8f9eb54 702 Gene3D G3DSA:3.40.1090.20 135 204 2.2E-5 T 23-10-2018 DLM_1066 7b771441c49779906484e247e8f9eb54 702 SUPERFAMILY SSF52151 1 225 2.54E-51 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DLM_1066 7b771441c49779906484e247e8f9eb54 702 Pfam PF01103 Surface antigen 424 613 6.8E-5 T 23-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DLM_1066 7b771441c49779906484e247e8f9eb54 702 Gene3D G3DSA:3.40.1090.10 1 120 4.1E-25 T 23-10-2018 DLM_2965 af3109ad655692f513b72c857f0079b7 347 SUPERFAMILY SSF144064 5 339 3.04E-114 T 23-10-2018 DLM_2965 af3109ad655692f513b72c857f0079b7 347 Gene3D G3DSA:3.40.1570.10 9 281 1.4E-123 T 23-10-2018 DLM_2965 af3109ad655692f513b72c857f0079b7 347 Gene3D G3DSA:3.40.1570.10 81 334 1.4E-123 T 23-10-2018 DLM_2965 af3109ad655692f513b72c857f0079b7 347 Pfam PF05171 Haemin-degrading HemS.ChuX domain 206 338 7.5E-40 T 23-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 DLM_2965 af3109ad655692f513b72c857f0079b7 347 Pfam PF05171 Haemin-degrading HemS.ChuX domain 30 155 2.7E-34 T 23-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 DLM_2109 0a6b895838c2a4521ac86cb79d661663 91 Gene3D G3DSA:4.10.520.10 1 90 2.8E-30 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_2109 0a6b895838c2a4521ac86cb79d661663 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 3.5E-29 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2109 0a6b895838c2a4521ac86cb79d661663 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.4E-9 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2109 0a6b895838c2a4521ac86cb79d661663 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.4E-9 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2109 0a6b895838c2a4521ac86cb79d661663 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.4E-9 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2109 0a6b895838c2a4521ac86cb79d661663 91 SMART SM00411 1 90 1.7E-31 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2109 0a6b895838c2a4521ac86cb79d661663 91 SUPERFAMILY SSF47729 1 89 3.68E-27 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_0887 d1fbe28451dbcd6cbd504687853e67b3 401 Pfam PF07885 Ion channel 323 396 3.7E-13 T 23-10-2018 IPR013099 Potassium channel domain DLM_0887 d1fbe28451dbcd6cbd504687853e67b3 401 Gene3D G3DSA:1.10.287.70 301 399 1.1E-14 T 23-10-2018 DLM_0887 d1fbe28451dbcd6cbd504687853e67b3 401 Pfam PF00805 Pentapeptide repeats (8 copies) 173 211 0.002 T 23-10-2018 IPR001646 Pentapeptide repeat DLM_0887 d1fbe28451dbcd6cbd504687853e67b3 401 Pfam PF00805 Pentapeptide repeats (8 copies) 133 167 0.0018 T 23-10-2018 IPR001646 Pentapeptide repeat DLM_0887 d1fbe28451dbcd6cbd504687853e67b3 401 Gene3D G3DSA:2.160.20.100 63 226 7.2E-16 T 23-10-2018 DLM_0887 d1fbe28451dbcd6cbd504687853e67b3 401 SUPERFAMILY SSF81324 309 395 2.22E-15 T 23-10-2018 DLM_0887 d1fbe28451dbcd6cbd504687853e67b3 401 SUPERFAMILY SSF141571 125 213 3.66E-15 T 23-10-2018 DLM_2577 487b3a03f84c236e8aabe6dd99c2363c 376 Pfam PF07687 Peptidase dimerisation domain 175 281 2.0E-25 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain DLM_2577 487b3a03f84c236e8aabe6dd99c2363c 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 52.59 T 23-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DLM_2577 487b3a03f84c236e8aabe6dd99c2363c 376 Gene3D G3DSA:3.40.630.10 7 362 4.7E-133 T 23-10-2018 DLM_2577 487b3a03f84c236e8aabe6dd99c2363c 376 Pfam PF01546 Peptidase family M20/M25/M40 62 371 9.2E-45 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 DLM_2577 487b3a03f84c236e8aabe6dd99c2363c 376 Gene3D G3DSA:3.30.70.360 179 292 4.7E-133 T 23-10-2018 DLM_2577 487b3a03f84c236e8aabe6dd99c2363c 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 5.0E-167 T 23-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DLM_2577 487b3a03f84c236e8aabe6dd99c2363c 376 SUPERFAMILY SSF53187 3 373 1.13E-62 T 23-10-2018 DLM_2577 487b3a03f84c236e8aabe6dd99c2363c 376 SUPERFAMILY SSF55031 179 288 2.24E-30 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DLM_3542 c7b607a1d0276203b2a3cbfa753586cf 379 Gene3D G3DSA:3.40.50.2000 13 176 1.4E-94 T 23-10-2018 DLM_3542 c7b607a1d0276203b2a3cbfa753586cf 379 Pfam PF00534 Glycosyl transferases group 1 194 351 7.4E-31 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 DLM_3542 c7b607a1d0276203b2a3cbfa753586cf 379 Pfam PF13439 Glycosyltransferase Family 4 14 179 3.7E-20 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DLM_3542 c7b607a1d0276203b2a3cbfa753586cf 379 SUPERFAMILY SSF53756 3 373 3.68E-72 T 23-10-2018 DLM_3542 c7b607a1d0276203b2a3cbfa753586cf 379 Gene3D G3DSA:3.40.50.2000 177 327 1.4E-94 T 23-10-2018 DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 SUPERFAMILY SSF55785 234 359 6.28E-12 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 SUPERFAMILY SSF141868 553 795 2.09E-68 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 SMART SM00052 547 797 9.8E-70 T 23-10-2018 IPR001633 EAL domain DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 Pfam PF08448 PAS fold 251 359 4.8E-8 T 23-10-2018 IPR013656 PAS fold-4 DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 SUPERFAMILY SSF55073 379 537 1.02E-47 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 243 359 5.1E-7 T 23-10-2018 IPR000014 PAS domain DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 531 3.0E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 534 1.8E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 Gene3D G3DSA:3.30.70.270 368 536 7.2E-54 T 23-10-2018 DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 Gene3D G3DSA:3.30.450.20 234 366 4.3E-14 T 23-10-2018 DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 SMART SM00267 363 535 5.5E-61 T 23-10-2018 IPR000160 GGDEF domain DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 Gene3D G3DSA:3.20.20.450 537 797 8.7E-82 T 23-10-2018 IPR035919 EAL domain superfamily DLM_1146 eb660d27b034406139cb0af6c8f9298c 814 Pfam PF00563 EAL domain 553 792 8.9E-61 T 23-10-2018 IPR001633 EAL domain DLM_3109 ac637954caf1633a95e99d7f87cae4d9 414 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 397 4.9E-108 T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DLM_3109 ac637954caf1633a95e99d7f87cae4d9 414 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 321 341 - T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DLM_3109 ac637954caf1633a95e99d7f87cae4d9 414 Pfam PF00860 Permease family 7 374 9.0E-92 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DLM_4100 26dda0733596fe7fa175a0dc19fc7ef3 716 Gene3D G3DSA:3.10.450.50 635 716 3.9E-8 T 23-10-2018 DLM_4100 26dda0733596fe7fa175a0dc19fc7ef3 716 Pfam PF02810 SEC-C motif 698 715 8.5E-7 T 23-10-2018 IPR004027 SEC-C motif DLM_4100 26dda0733596fe7fa175a0dc19fc7ef3 716 SUPERFAMILY SSF103642 696 715 2.13E-6 T 23-10-2018 DLM_4493 b83fd42aeba53c4dce103ecb6fe25387 193 SUPERFAMILY SSF55729 1 160 1.13E-28 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_4493 b83fd42aeba53c4dce103ecb6fe25387 193 Gene3D G3DSA:3.40.630.30 2 168 1.3E-42 T 23-10-2018 DLM_4493 b83fd42aeba53c4dce103ecb6fe25387 193 Pfam PF00583 Acetyltransferase (GNAT) family 25 133 2.1E-12 T 23-10-2018 IPR000182 GNAT domain DLM_3484 c5842724bc2b754b7d340883f5e7454b 409 Pfam PF09664 Protein of unknown function C-terminus (DUF2399) 253 398 1.4E-11 T 23-10-2018 IPR024465 Domain of unknown function DUF2399 DLM_3484 c5842724bc2b754b7d340883f5e7454b 409 Gene3D G3DSA:3.40.1360.10 221 403 2.1E-5 T 23-10-2018 DLM_3484 c5842724bc2b754b7d340883f5e7454b 409 SUPERFAMILY SSF56726 254 399 6.93E-10 T 23-10-2018 IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily GO:0000737|GO:0003677|GO:0005694 Reactome: R-HSA-912446 DLM_3097 c6331bd14005d5969ff1be40b4c26e93 228 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 199 2.2E-23 T 23-10-2018 DLM_3097 c6331bd14005d5969ff1be40b4c26e93 228 SUPERFAMILY SSF56784 6 220 4.84E-31 T 23-10-2018 IPR036412 HAD-like superfamily DLM_3097 c6331bd14005d5969ff1be40b4c26e93 228 Gene3D G3DSA:1.20.1440.100 19 92 1.5E-71 T 23-10-2018 DLM_3097 c6331bd14005d5969ff1be40b4c26e93 228 Gene3D G3DSA:3.40.50.1000 7 224 1.5E-71 T 23-10-2018 IPR023214 HAD superfamily DLM_3097 c6331bd14005d5969ff1be40b4c26e93 228 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 7 210 9.0E-40 T 23-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like DLM_3097 c6331bd14005d5969ff1be40b4c26e93 228 Pfam PF12710 haloacid dehalogenase-like hydrolase 8 197 2.2E-33 T 23-10-2018 DLM_0041 3796acaf462cf92393dd147603d46509 682 SUPERFAMILY SSF52540 284 640 4.38E-42 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0041 3796acaf462cf92393dd147603d46509 682 SUPERFAMILY SSF52540 175 443 4.74E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0041 3796acaf462cf92393dd147603d46509 682 Pfam PF00270 DEAD/DEAH box helicase 267 421 1.0E-14 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DLM_0041 3796acaf462cf92393dd147603d46509 682 Gene3D G3DSA:3.40.50.300 447 619 7.1E-52 T 23-10-2018 DLM_0041 3796acaf462cf92393dd147603d46509 682 SUPERFAMILY SSF50249 14 169 1.28E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0041 3796acaf462cf92393dd147603d46509 682 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 31 653 9.9E-217 T 23-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 DLM_0041 3796acaf462cf92393dd147603d46509 682 Pfam PF00271 Helicase conserved C-terminal domain 464 577 2.9E-17 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_0041 3796acaf462cf92393dd147603d46509 682 Pfam PF17191 RecG wedge domain 14 167 1.2E-10 T 23-10-2018 IPR033454 RecG, wedge domain DLM_0041 3796acaf462cf92393dd147603d46509 682 SMART SM00487 259 449 1.8E-32 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DLM_0041 3796acaf462cf92393dd147603d46509 682 Gene3D G3DSA:3.40.50.300 212 440 2.1E-85 T 23-10-2018 DLM_0041 3796acaf462cf92393dd147603d46509 682 SMART SM00490 498 578 3.4E-19 T 23-10-2018 IPR001650 Helicase, C-terminal DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.1E-30 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.1E-30 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.1E-30 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.1E-30 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 SUPERFAMILY SSF47323 316 456 1.31E-37 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 Gene3D G3DSA:1.20.120.640 306 457 2.2E-42 T 23-10-2018 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 SUPERFAMILY SSF52374 2 312 1.26E-98 T 23-10-2018 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 Pfam PF09190 DALR domain 343 398 2.5E-16 T 23-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 457 38.659 T 23-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 Gene3D G3DSA:3.40.50.620 1 305 6.2E-136 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.2E-133 T 23-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 456 5.5E-175 T 23-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DLM_0691 634d80958dbad560a6dc54e2df33b1b9 457 SMART SM00840 343 398 5.1E-23 T 23-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DLM_0450 a7ce8b8321492481ed16a2764c316ea5 245 Gene3D G3DSA:1.10.3720.10 13 242 3.6E-41 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0450 a7ce8b8321492481ed16a2764c316ea5 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 50 233 5.6E-15 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0450 a7ce8b8321492481ed16a2764c316ea5 245 SUPERFAMILY SSF161098 19 228 7.72E-33 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0450 a7ce8b8321492481ed16a2764c316ea5 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 19 83 2.8E-13 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_0104 e63c45c1003c60281359937c1de81a03 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 23-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 137 9.8E-43 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 2.7E-182 T 23-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Gene3D G3DSA:3.30.310.50 372 444 2.7E-19 T 23-10-2018 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Gene3D G3DSA:3.40.120.10 177 363 2.3E-57 T 23-10-2018 DLM_0104 e63c45c1003c60281359937c1de81a03 444 SUPERFAMILY SSF53738 2 183 1.81E-48 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 SUPERFAMILY SSF55957 360 443 8.11E-18 T 23-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 4.1E-16 T 23-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 SUPERFAMILY SSF53738 158 258 7.46E-29 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Gene3D G3DSA:3.40.120.10 259 341 2.3E-57 T 23-10-2018 DLM_0104 e63c45c1003c60281359937c1de81a03 444 SUPERFAMILY SSF53738 260 367 7.46E-29 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Gene3D G3DSA:3.40.120.10 2 156 6.0E-49 T 23-10-2018 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 388 440 1.6E-11 T 23-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 45.893 T 23-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 369 7.2E-32 T 23-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 8.1E-14 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 8.1E-14 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_0104 e63c45c1003c60281359937c1de81a03 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 8.1E-14 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DLM_3279 b1eb8a7a9aa133be129e1b14ab790540 156 Gene3D G3DSA:1.10.10.10 1 138 7.1E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3279 b1eb8a7a9aa133be129e1b14ab790540 156 SUPERFAMILY SSF46785 2 131 1.7E-28 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3279 b1eb8a7a9aa133be129e1b14ab790540 156 Pfam PF02082 Transcriptional regulator 1 82 6.5E-21 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type DLM_3279 b1eb8a7a9aa133be129e1b14ab790540 156 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 2.3E-26 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 Pfam PF06723 MreB/Mbl protein 10 339 3.4E-151 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 SUPERFAMILY SSF53067 9 152 2.59E-37 T 23-10-2018 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 Gene3D G3DSA:3.90.640.10 190 263 2.6E-132 T 23-10-2018 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 Gene3D G3DSA:3.30.420.40 158 321 2.6E-132 T 23-10-2018 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 Gene3D G3DSA:3.30.420.40 13 331 2.6E-132 T 23-10-2018 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 3.0E-64 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 3.0E-64 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 3.0E-64 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 3.0E-64 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 3.0E-64 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.2E-159 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DLM_4182 023ed75a10eab132df6f4f86abf85bcb 347 SUPERFAMILY SSF53067 153 337 5.84E-49 T 23-10-2018 DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.4E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.4E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.4E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 Gene3D G3DSA:1.10.10.10 9 96 3.5E-28 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 SUPERFAMILY SSF53850 95 301 1.99E-45 T 23-10-2018 DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 Pfam PF03466 LysR substrate binding domain 94 300 3.7E-47 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 SUPERFAMILY SSF46785 11 117 9.31E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 Gene3D G3DSA:3.40.190.10 169 270 3.6E-64 T 23-10-2018 DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 Gene3D G3DSA:3.40.190.10 97 298 3.6E-64 T 23-10-2018 DLM_4129 54a1cb26a39b609e9c3075285e222c70 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 5.2E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 Gene3D G3DSA:3.40.50.300 3 278 6.2E-153 T 23-10-2018 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 SUPERFAMILY SSF52540 3 301 7.82E-87 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3407 204f2728e953198f58869f1bd99fc25c 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.009 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 SUPERFAMILY SSF81271 279 359 5.89E-36 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 PIRSF PIRSF006641 1 363 8.4E-156 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 Gene3D G3DSA:1.10.150.300 113 200 6.2E-153 T 23-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 Pfam PF01926 50S ribosome-binding GTPase 5 127 6.2E-23 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 5.2E-40 T 23-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 Gene3D G3DSA:3.10.20.30 48 361 6.2E-153 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_3407 204f2728e953198f58869f1bd99fc25c 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.2E-160 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.7E-35 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.7E-35 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.7E-35 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_3407 204f2728e953198f58869f1bd99fc25c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.7E-35 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_0685 ca79ad6fecee8c6f2a37e74cdc8bae55 446 Gene3D G3DSA:1.10.3210.10 257 444 1.0E-55 T 23-10-2018 DLM_0685 ca79ad6fecee8c6f2a37e74cdc8bae55 446 SUPERFAMILY SSF109604 270 441 8.46E-32 T 23-10-2018 DLM_0685 ca79ad6fecee8c6f2a37e74cdc8bae55 446 SUPERFAMILY SSF109604 13 225 4.4E-9 T 23-10-2018 DLM_0685 ca79ad6fecee8c6f2a37e74cdc8bae55 446 Pfam PF13487 HD domain 130 183 1.4E-10 T 23-10-2018 DLM_0685 ca79ad6fecee8c6f2a37e74cdc8bae55 446 Pfam PF13487 HD domain 330 392 9.2E-18 T 23-10-2018 DLM_0685 ca79ad6fecee8c6f2a37e74cdc8bae55 446 SMART SM00471 275 410 2.4E-8 T 23-10-2018 IPR003607 HD/PDEase domain DLM_2609 fd429e8a3c8c909eb9a4294490dde579 118 SUPERFAMILY SSF52833 5 116 3.84E-19 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_2609 fd429e8a3c8c909eb9a4294490dde579 118 Pfam PF00085 Thioredoxin 17 107 1.3E-7 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 DLM_2609 fd429e8a3c8c909eb9a4294490dde579 118 Gene3D G3DSA:3.40.30.10 12 111 5.3E-11 T 23-10-2018 DLM_3234 cdb711bd67390989759fdfd730ff9c20 302 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_3234 cdb711bd67390989759fdfd730ff9c20 302 SUPERFAMILY SSF53613 1 295 1.01E-70 T 23-10-2018 IPR029056 Ribokinase-like DLM_3234 cdb711bd67390989759fdfd730ff9c20 302 Gene3D G3DSA:3.40.1190.20 1 302 3.1E-75 T 23-10-2018 IPR029056 Ribokinase-like DLM_3234 cdb711bd67390989759fdfd730ff9c20 302 Pfam PF00294 pfkB family carbohydrate kinase 17 296 2.6E-52 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 3.8E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 3.8E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 3.8E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 SUPERFAMILY SSF52172 5 141 1.05E-32 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 SUPERFAMILY SSF46894 132 200 1.8E-20 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 SMART SM00421 141 198 5.7E-23 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 SMART SM00448 6 117 1.6E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 Pfam PF00072 Response regulator receiver domain 8 117 3.9E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 197 6.5E-21 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 Gene3D G3DSA:1.10.10.10 135 201 1.1E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1637 f83521be662cec77c4ade74d0bcc4df5 222 Gene3D G3DSA:3.40.50.2300 2 134 4.3E-40 T 23-10-2018 DLM_3804 e72f3cacb92c17f551d5702e66cf8983 174 SUPERFAMILY SSF52540 3 172 7.94E-49 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3804 e72f3cacb92c17f551d5702e66cf8983 174 Gene3D G3DSA:3.40.50.300 3 172 1.5E-52 T 23-10-2018 DLM_3804 e72f3cacb92c17f551d5702e66cf8983 174 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 170 3.8E-55 T 23-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DLM_3804 e72f3cacb92c17f551d5702e66cf8983 174 PIRSF PIRSF006135 1 174 2.5E-52 T 23-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DLM_0389 7f1dbfb67de14e61943f7bdc6d387fd5 78 Pfam PF00550 Phosphopantetheine attachment site 5 70 3.9E-14 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain DLM_0389 7f1dbfb67de14e61943f7bdc6d387fd5 78 Gene3D G3DSA:1.10.1200.10 1 73 2.2E-17 T 23-10-2018 IPR036736 ACP-like superfamily DLM_0389 7f1dbfb67de14e61943f7bdc6d387fd5 78 SUPERFAMILY SSF47336 4 73 2.75E-14 T 23-10-2018 IPR036736 ACP-like superfamily DLM_0389 7f1dbfb67de14e61943f7bdc6d387fd5 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 32 72 0.002 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DLM_0389 7f1dbfb67de14e61943f7bdc6d387fd5 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 30 45 - T 23-10-2018 IPR006162 Phosphopantetheine attachment site DLM_3742 c8d9b032d475f9043b95629102d84829 626 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 10 626 35.531 T 23-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup DLM_3742 c8d9b032d475f9043b95629102d84829 626 Pfam PF02705 K+ potassium transporter 19 548 2.8E-219 T 23-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 DLM_1944 28b90e782f09191165bb502e2c5a417f 245 SUPERFAMILY SSF102114 34 242 1.7E-17 T 23-10-2018 DLM_1944 28b90e782f09191165bb502e2c5a417f 245 Pfam PF13353 4Fe-4S single cluster domain 35 104 1.2E-5 T 23-10-2018 DLM_1944 28b90e782f09191165bb502e2c5a417f 245 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 20 210 7.4E-52 T 23-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein DLM_1944 28b90e782f09191165bb502e2c5a417f 245 Gene3D G3DSA:3.20.20.70 19 215 3.7E-25 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1944 28b90e782f09191165bb502e2c5a417f 245 Pfam PF04055 Radical SAM superfamily 39 165 3.5E-11 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_1545 e48ff50c4a5dc572cf8a969f0c0988ba 207 Pfam PF03358 NADPH-dependent FMN reductase 17 161 2.0E-31 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DLM_1545 e48ff50c4a5dc572cf8a969f0c0988ba 207 Gene3D G3DSA:3.40.50.360 9 190 7.6E-45 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_1545 e48ff50c4a5dc572cf8a969f0c0988ba 207 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 17 189 1.7E-76 T 23-10-2018 IPR019912 FMN reductase, MsuE-like DLM_1545 e48ff50c4a5dc572cf8a969f0c0988ba 207 SUPERFAMILY SSF52218 10 189 3.11E-35 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_3710 9c08e7acfed718960928290bd1b70bb0 356 Gene3D G3DSA:3.90.1150.10 14 350 4.6E-110 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3710 9c08e7acfed718960928290bd1b70bb0 356 Gene3D G3DSA:3.40.640.10 50 263 4.6E-110 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3710 9c08e7acfed718960928290bd1b70bb0 356 SUPERFAMILY SSF53383 13 353 4.54E-73 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3710 9c08e7acfed718960928290bd1b70bb0 356 Pfam PF00155 Aminotransferase class I and II 28 349 3.6E-46 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_3710 9c08e7acfed718960928290bd1b70bb0 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 352 3.7E-101 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DLM_3710 9c08e7acfed718960928290bd1b70bb0 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 355 56.624 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 2 281 34.972 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 4 279 3.4E-114 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00101 Aspartate carbamoyltransferase signature 238 243 3.1E-37 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00101 Aspartate carbamoyltransferase signature 260 274 3.1E-37 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 64 3.1E-37 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00101 Aspartate carbamoyltransferase signature 16 38 3.1E-37 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00101 Aspartate carbamoyltransferase signature 200 209 3.1E-37 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00101 Aspartate carbamoyltransferase signature 109 126 3.1E-37 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 Gene3D G3DSA:3.40.50.1370 110 266 2.1E-112 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 26 33 - T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 Gene3D G3DSA:3.40.50.1370 2 278 2.1E-112 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 123 1.0E-40 T 23-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 SUPERFAMILY SSF53671 2 281 1.44E-95 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 130 277 8.8E-32 T 23-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 26 45 7.4E-27 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 234 243 7.4E-27 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 110 121 7.4E-27 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_3949 a1e60825f858feb6be4463e6437eb075 283 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 244 267 7.4E-27 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DLM_4443 5d47dad6472ca7abd1da1463f3d08a12 328 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 14 275 57.998 T 23-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 DLM_4443 5d47dad6472ca7abd1da1463f3d08a12 328 Pfam PF01171 PP-loop family 46 208 9.7E-12 T 23-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DLM_4443 5d47dad6472ca7abd1da1463f3d08a12 328 Gene3D G3DSA:3.40.50.620 3 263 9.2E-47 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_4443 5d47dad6472ca7abd1da1463f3d08a12 328 SUPERFAMILY SSF52402 32 259 1.07E-53 T 23-10-2018 DLM_4443 5d47dad6472ca7abd1da1463f3d08a12 328 PIRSF PIRSF004976 1 274 2.2E-74 T 23-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 DLM_0889 842cbb4db51d5cd056623e635824ffb5 138 Pfam PF06252 Protein of unknown function (DUF1018) 21 133 3.6E-24 T 23-10-2018 IPR009363 Bacteriophage Mu, Gp16 DLM_4504 bbd0d7bac00dc971c34ef1f2071ee6b9 405 SUPERFAMILY SSF56266 16 402 9.81E-137 T 23-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DLM_4504 bbd0d7bac00dc971c34ef1f2071ee6b9 405 Gene3D G3DSA:3.30.2330.10 189 274 8.1E-26 T 23-10-2018 DLM_4504 bbd0d7bac00dc971c34ef1f2071ee6b9 405 Pfam PF01960 ArgJ family 22 405 8.7E-144 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DLM_4504 bbd0d7bac00dc971c34ef1f2071ee6b9 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 403 1.0E-174 T 23-10-2018 DLM_4504 bbd0d7bac00dc971c34ef1f2071ee6b9 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 405 8.0E-122 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DLM_4504 bbd0d7bac00dc971c34ef1f2071ee6b9 405 Gene3D G3DSA:3.60.70.12 2 188 1.2E-59 T 23-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DLM_4504 bbd0d7bac00dc971c34ef1f2071ee6b9 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 153.077 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DLM_4504 bbd0d7bac00dc971c34ef1f2071ee6b9 405 Gene3D G3DSA:3.10.20.340 275 405 6.0E-42 T 23-10-2018 DLM_3107 4731546bf2cc552cfe73da4c534095e1 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 1.9E-87 T 23-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DLM_3107 4731546bf2cc552cfe73da4c534095e1 210 Pfam PF14681 Uracil phosphoribosyltransferase 5 207 1.1E-60 T 23-10-2018 DLM_3107 4731546bf2cc552cfe73da4c534095e1 210 Gene3D G3DSA:3.40.50.2020 1 208 3.2E-70 T 23-10-2018 DLM_3107 4731546bf2cc552cfe73da4c534095e1 210 SUPERFAMILY SSF53271 3 206 2.36E-64 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like DLM_3107 4731546bf2cc552cfe73da4c534095e1 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.908 T 23-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DLM_2311 fbff76731067b13af0c5b028496bd6a6 260 SUPERFAMILY SSF109998 26 159 1.96E-18 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily DLM_2311 fbff76731067b13af0c5b028496bd6a6 260 SUPERFAMILY SSF54534 130 221 1.05E-27 T 23-10-2018 DLM_2311 fbff76731067b13af0c5b028496bd6a6 260 Gene3D G3DSA:3.10.50.40 126 227 3.6E-33 T 23-10-2018 DLM_2311 fbff76731067b13af0c5b028496bd6a6 260 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 157 178 - T 23-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DLM_2311 fbff76731067b13af0c5b028496bd6a6 260 Pfam PF13616 PPIC-type PPIASE domain 119 220 1.5E-22 T 23-10-2018 DLM_1377 cadf26d92622f57dc079ef323a84b491 227 Pfam PF01730 UreF 38 184 4.4E-37 T 23-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DLM_1377 cadf26d92622f57dc079ef323a84b491 227 Gene3D G3DSA:1.10.4190.10 4 205 8.7E-50 T 23-10-2018 IPR038277 UreF domain superfamily DLM_1377 cadf26d92622f57dc079ef323a84b491 227 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 227 30.936 T 23-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DLM_1377 cadf26d92622f57dc079ef323a84b491 227 PIRSF PIRSF009467 3 227 8.3E-60 T 23-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DLM_3446 0d1af0bc88ed65bdad5ae0e3498f3498 175 Gene3D G3DSA:3.40.50.2300 4 118 3.8E-27 T 23-10-2018 DLM_3446 0d1af0bc88ed65bdad5ae0e3498f3498 175 Pfam PF00072 Response regulator receiver domain 6 113 2.7E-19 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3446 0d1af0bc88ed65bdad5ae0e3498f3498 175 Pfam PF02954 Bacterial regulatory protein, Fis family 137 169 5.2E-7 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_3446 0d1af0bc88ed65bdad5ae0e3498f3498 175 SMART SM00448 3 113 1.3E-19 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3446 0d1af0bc88ed65bdad5ae0e3498f3498 175 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 137 154 8.4E-5 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_3446 0d1af0bc88ed65bdad5ae0e3498f3498 175 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 154 174 8.4E-5 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_3446 0d1af0bc88ed65bdad5ae0e3498f3498 175 SUPERFAMILY SSF52172 5 160 7.26E-28 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3446 0d1af0bc88ed65bdad5ae0e3498f3498 175 Gene3D G3DSA:1.10.10.60 119 173 7.8E-21 T 23-10-2018 DLM_2470 53af0710f54306502814354dc65a0d86 393 Gene3D G3DSA:1.20.1250.20 8 194 4.7E-26 T 23-10-2018 DLM_2470 53af0710f54306502814354dc65a0d86 393 Gene3D G3DSA:1.20.1250.20 196 389 3.3E-39 T 23-10-2018 DLM_2470 53af0710f54306502814354dc65a0d86 393 SUPERFAMILY SSF103473 14 384 5.1E-50 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2470 53af0710f54306502814354dc65a0d86 393 PIRSF PIRSF004925 5 392 5.6E-103 T 23-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter DLM_2470 53af0710f54306502814354dc65a0d86 393 Pfam PF12832 MFS_1 like family 16 364 5.7E-75 T 23-10-2018 IPR024989 Major facilitator superfamily associated domain DLM_0004 ac522ee3cda6692f1282f06504d86aa6 452 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 227 442 2.5E-35 T 23-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 DLM_0004 ac522ee3cda6692f1282f06504d86aa6 452 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 103 2.1E-20 T 23-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 Pfam PF01556 DnaJ C terminal domain 122 334 3.4E-45 T 23-10-2018 IPR002939 Chaperone DnaJ, C-terminal DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 SUPERFAMILY SSF49493 116 267 4.97E-21 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 SUPERFAMILY SSF49493 259 345 7.98E-22 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 Pfam PF00684 DnaJ central domain 148 208 3.2E-14 T 23-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 Gene3D G3DSA:1.10.287.110 1 113 1.6E-40 T 23-10-2018 IPR036869 Chaperone J-domain superfamily DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-10-2018 IPR018253 DnaJ domain, conserved site DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 Gene3D G3DSA:2.10.230.10 146 210 2.7E-21 T 23-10-2018 DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 SUPERFAMILY SSF57938 135 210 4.05E-21 T 23-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 Pfam PF00226 DnaJ domain 5 67 4.1E-30 T 23-10-2018 IPR001623 DnaJ domain DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 PRINTS PR00625 DnaJ domain signature 42 62 2.1E-34 T 23-10-2018 IPR001623 DnaJ domain DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 PRINTS PR00625 DnaJ domain signature 7 25 2.1E-34 T 23-10-2018 IPR001623 DnaJ domain DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 PRINTS PR00625 DnaJ domain signature 62 81 2.1E-34 T 23-10-2018 IPR001623 DnaJ domain DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 PRINTS PR00625 DnaJ domain signature 25 40 2.1E-34 T 23-10-2018 IPR001623 DnaJ domain DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 7.5E-141 T 23-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.34 T 23-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 SMART SM00271 4 62 4.1E-34 T 23-10-2018 IPR001623 DnaJ domain DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 SUPERFAMILY SSF46565 1 110 3.79E-38 T 23-10-2018 IPR036869 Chaperone J-domain superfamily DLM_3024 503cbe06ac6a5ab14fe67bda59ca4eac 375 Gene3D G3DSA:2.60.260.20 256 364 6.3E-28 T 23-10-2018 DLM_0750 6d0959ce214b7a0555d3780c3fdec871 292 Gene3D G3DSA:1.10.287.480 176 223 4.7E-18 T 23-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DLM_0750 6d0959ce214b7a0555d3780c3fdec871 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 282 28.632 T 23-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DLM_0750 6d0959ce214b7a0555d3780c3fdec871 292 PIRSF PIRSF005261 1 282 7.0E-75 T 23-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DLM_0750 6d0959ce214b7a0555d3780c3fdec871 292 Gene3D G3DSA:3.55.30.10 1 174 5.2E-59 T 23-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DLM_0750 6d0959ce214b7a0555d3780c3fdec871 292 Gene3D G3DSA:3.90.1280.10 224 281 4.5E-22 T 23-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DLM_0750 6d0959ce214b7a0555d3780c3fdec871 292 SUPERFAMILY SSF118352 224 280 1.23E-18 T 23-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DLM_0750 6d0959ce214b7a0555d3780c3fdec871 292 SUPERFAMILY SSF64397 4 230 1.06E-65 T 23-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DLM_0750 6d0959ce214b7a0555d3780c3fdec871 292 Pfam PF01430 Hsp33 protein 5 271 2.0E-81 T 23-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DLM_2773 5956c398580ec330569cd775b8210aed 371 SUPERFAMILY SSF54631 234 369 1.2E-30 T 23-10-2018 DLM_2773 5956c398580ec330569cd775b8210aed 371 Gene3D G3DSA:3.10.580.10 215 300 1.2E-15 T 23-10-2018 DLM_2773 5956c398580ec330569cd775b8210aed 371 Gene3D G3DSA:3.10.580.10 301 371 5.6E-13 T 23-10-2018 DLM_2773 5956c398580ec330569cd775b8210aed 371 SMART SM00116 321 369 0.0054 T 23-10-2018 IPR000644 CBS domain DLM_2773 5956c398580ec330569cd775b8210aed 371 SMART SM00116 251 297 4.0E-5 T 23-10-2018 IPR000644 CBS domain DLM_2773 5956c398580ec330569cd775b8210aed 371 Pfam PF04982 HPP family 58 177 1.8E-38 T 23-10-2018 IPR007065 HPP DLM_2773 5956c398580ec330569cd775b8210aed 371 Pfam PF00571 CBS domain 314 368 8.1E-10 T 23-10-2018 IPR000644 CBS domain DLM_2773 5956c398580ec330569cd775b8210aed 371 Pfam PF00571 CBS domain 245 294 2.8E-11 T 23-10-2018 IPR000644 CBS domain DLM_2168 d7790c7f6d6a268afac4f75c59c4b00f 122 Pfam PF13473 Cupredoxin-like domain 9 121 5.6E-23 T 23-10-2018 IPR028096 EfeO-type cupredoxin-like domain DLM_2168 d7790c7f6d6a268afac4f75c59c4b00f 122 Gene3D G3DSA:2.60.40.420 17 122 1.2E-5 T 23-10-2018 IPR008972 Cupredoxin DLM_2168 d7790c7f6d6a268afac4f75c59c4b00f 122 SUPERFAMILY SSF49503 26 122 3.8E-5 T 23-10-2018 IPR008972 Cupredoxin DLM_2642 c581303a872e779173e8627a8c900b58 212 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 7 88 1.2E-26 T 23-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DLM_2642 c581303a872e779173e8627a8c900b58 212 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 94 190 2.2E-12 T 23-10-2018 IPR032871 AHH domain-containing protein DLM_2642 c581303a872e779173e8627a8c900b58 212 PRINTS PR00394 RHS protein signature 56 75 1.4E-10 T 23-10-2018 IPR001826 RHS protein DLM_2642 c581303a872e779173e8627a8c900b58 212 PRINTS PR00394 RHS protein signature 33 53 1.4E-10 T 23-10-2018 IPR001826 RHS protein DLM_2642 c581303a872e779173e8627a8c900b58 212 Gene3D G3DSA:2.180.10.10 2 88 3.9E-25 T 23-10-2018 DLM_1938 b656620f8029acb7ddbf888fdcab8395 329 Pfam PF13460 NAD(P)H-binding 12 110 1.8E-12 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_1938 b656620f8029acb7ddbf888fdcab8395 329 SUPERFAMILY SSF51735 5 320 2.45E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1938 b656620f8029acb7ddbf888fdcab8395 329 Gene3D G3DSA:3.40.50.720 1 324 5.5E-35 T 23-10-2018 DLM_1594 9f0c648861ceac02c9ca255d8947ae92 288 SUPERFAMILY SSF55166 160 279 1.02E-27 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DLM_1594 9f0c648861ceac02c9ca255d8947ae92 288 Gene3D G3DSA:3.30.1380.10 153 276 2.2E-29 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DLM_1594 9f0c648861ceac02c9ca255d8947ae92 288 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 212 276 3.9E-16 T 23-10-2018 IPR039561 Peptidase M15C GO:0008233 DLM_2236 2d07491f83aa16ea564c013da65aa585 468 SUPERFAMILY SSF56059 91 358 1.15E-63 T 23-10-2018 DLM_2236 2d07491f83aa16ea564c013da65aa585 468 SUPERFAMILY SSF52440 8 121 7.91E-45 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_2236 2d07491f83aa16ea564c013da65aa585 468 Pfam PF00289 Biotin carboxylase, N-terminal domain 10 118 4.7E-43 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_2236 2d07491f83aa16ea564c013da65aa585 468 Gene3D G3DSA:3.30.470.130 2 453 7.4E-188 T 23-10-2018 DLM_2236 2d07491f83aa16ea564c013da65aa585 468 SMART SM00878 342 448 1.2E-62 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_2236 2d07491f83aa16ea564c013da65aa585 468 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 123 328 1.3E-68 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_2236 2d07491f83aa16ea564c013da65aa585 468 Pfam PF02785 Biotin carboxylase C-terminal domain 342 449 8.1E-40 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_2236 2d07491f83aa16ea564c013da65aa585 468 SUPERFAMILY SSF51246 337 452 8.89E-43 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DLM_2236 2d07491f83aa16ea564c013da65aa585 468 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0375 28b37be608ff15b3434a09c3b111db88 463 Gene3D G3DSA:3.90.1150.10 7 457 2.1E-204 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0375 28b37be608ff15b3434a09c3b111db88 463 SUPERFAMILY SSF53383 4 461 1.02E-140 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0375 28b37be608ff15b3434a09c3b111db88 463 PIRSF PIRSF001386 1 463 9.6E-218 T 23-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 DLM_0375 28b37be608ff15b3434a09c3b111db88 463 Gene3D G3DSA:3.40.640.10 59 323 2.1E-204 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0375 28b37be608ff15b3434a09c3b111db88 463 Hamap MF_00544 Tryptophanase [tnaA]. 2 462 102.044 T 23-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 DLM_0375 28b37be608ff15b3434a09c3b111db88 463 Pfam PF01212 Beta-eliminating lyase 47 428 6.0E-93 T 23-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DLM_1100 c8da3a84e547851dfad918fc59087610 469 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 18 457 6.8E-177 T 23-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DLM_1100 c8da3a84e547851dfad918fc59087610 469 Pfam PF00772 DnaB-like helicase N terminal domain 18 119 1.4E-35 T 23-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DLM_1100 c8da3a84e547851dfad918fc59087610 469 Pfam PF03796 DnaB-like helicase C terminal domain 198 455 1.2E-111 T 23-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DLM_1100 c8da3a84e547851dfad918fc59087610 469 SMART SM00382 215 414 1.3E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1100 c8da3a84e547851dfad918fc59087610 469 SUPERFAMILY SSF48024 16 126 9.15E-38 T 23-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DLM_1100 c8da3a84e547851dfad918fc59087610 469 Gene3D G3DSA:3.40.50.300 176 458 5.0E-105 T 23-10-2018 DLM_1100 c8da3a84e547851dfad918fc59087610 469 SUPERFAMILY SSF52540 196 448 6.61E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1100 c8da3a84e547851dfad918fc59087610 469 Gene3D G3DSA:1.10.860.10 11 175 2.6E-53 T 23-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SUPERFAMILY SSF50249 188 273 1.0E-26 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SUPERFAMILY SSF50249 254 357 2.14E-26 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PIRSF PIRSF002111 1 533 5.6E-213 T 23-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SUPERFAMILY SSF50249 341 439 1.64E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 2 519 2.2E-206 T 23-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SUPERFAMILY SSF50249 102 183 3.64E-13 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SUPERFAMILY SSF50249 5 111 7.55E-17 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SMART SM00316 102 170 9.8E-6 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SMART SM00316 18 86 0.18 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SMART SM00316 448 519 6.0E-21 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SMART SM00316 361 433 1.6E-22 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SMART SM00316 274 346 8.9E-25 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SMART SM00316 189 259 1.8E-30 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Gene3D G3DSA:2.40.50.140 186 266 1.6E-28 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Pfam PF00575 S1 RNA binding domain 280 346 7.0E-22 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Pfam PF00575 S1 RNA binding domain 449 519 1.5E-16 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Pfam PF00575 S1 RNA binding domain 361 433 2.2E-19 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Pfam PF00575 S1 RNA binding domain 102 170 5.0E-9 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Pfam PF00575 S1 RNA binding domain 18 83 7.1E-5 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Pfam PF00575 S1 RNA binding domain 188 259 4.3E-23 T 23-10-2018 IPR003029 S1 domain GO:0003676 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 SUPERFAMILY SSF50249 432 529 5.43E-20 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Gene3D G3DSA:2.40.50.140 444 526 1.1E-20 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Gene3D G3DSA:2.40.50.140 357 443 1.5E-25 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Gene3D G3DSA:2.40.50.140 97 180 7.1E-7 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Gene3D G3DSA:2.40.50.140 267 356 8.9E-28 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 20 38 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 125 142 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 289 308 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 107 123 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 38 52 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 211 232 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 154 174 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 329 347 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 PRINTS PR00681 Ribosomal protein S1 signature 83 102 1.3E-82 T 23-10-2018 DLM_2809 c5ffd6b1dd40dab7cbaf88f478f7e1f0 558 Gene3D G3DSA:2.40.50.140 5 96 3.8E-13 T 23-10-2018 DLM_0858 60caf5d52eb7de4636fc5f9f792e75dd 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 234 2.6E-20 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0858 60caf5d52eb7de4636fc5f9f792e75dd 243 Gene3D G3DSA:1.10.3720.10 25 235 1.6E-48 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0858 60caf5d52eb7de4636fc5f9f792e75dd 243 SUPERFAMILY SSF161098 28 223 8.76E-39 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0858 60caf5d52eb7de4636fc5f9f792e75dd 243 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 128 1.8E-21 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 Pfam PF01479 S4 domain 8 54 6.2E-10 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 SUPERFAMILY SSF55120 72 297 5.44E-64 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 Pfam PF00849 RNA pseudouridylate synthase 83 233 6.6E-31 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 121 135 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 Gene3D G3DSA:3.30.2350.10 75 298 2.9E-73 T 23-10-2018 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 SMART SM00363 8 70 3.6E-8 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 Gene3D G3DSA:3.10.290.10 1 60 2.3E-14 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 5 297 2.4E-80 T 23-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_0731 520f86e05a244997aa0d5ce8ce65acf2 298 SUPERFAMILY SSF55174 7 58 1.47E-8 T 23-10-2018 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 Gene3D G3DSA:3.40.50.300 90 285 9.1E-124 T 23-10-2018 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 SUPERFAMILY SSF47446 298 431 1.31E-44 T 23-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 SMART SM00382 99 301 3.7E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 430 1.8E-181 T 23-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 SMART SM00962 100 296 4.2E-120 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 Gene3D G3DSA:1.10.260.30 328 450 5.4E-42 T 23-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 SUPERFAMILY SSF52540 42 352 1.59E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 6.7E-76 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 SMART SM00963 1 86 8.7E-37 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 Gene3D G3DSA:1.20.120.140 4 305 9.1E-124 T 23-10-2018 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 Pfam PF02978 Signal peptide binding domain 329 428 2.1E-33 T 23-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.2E-20 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_0076 d47258c6adf861ae941dd2793f5b9956 451 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 448 34.477 T 23-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DLM_2848 45f6ec7ed396e85d6b8e1a4213e6303e 1088 Pfam PF06744 Type VI secretion protein IcmF C-terminal 823 1020 1.7E-45 T 23-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal DLM_2848 45f6ec7ed396e85d6b8e1a4213e6303e 1088 Pfam PF06761 Intracellular multiplication and human macrophage-killing 383 691 2.3E-59 T 23-10-2018 IPR009612 ImcF-related DLM_4183 3eea16d466e74f21e956bac4a2fe3f9e 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 3.9E-29 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DLM_4183 3eea16d466e74f21e956bac4a2fe3f9e 95 SUPERFAMILY SSF141000 3 93 6.54E-30 T 23-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 DLM_4183 3eea16d466e74f21e956bac4a2fe3f9e 95 Gene3D G3DSA:1.10.20.60 1 93 2.0E-24 T 23-10-2018 DLM_4183 3eea16d466e74f21e956bac4a2fe3f9e 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.969 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DLM_4183 3eea16d466e74f21e956bac4a2fe3f9e 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 7.1E-20 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DLM_0706 11a7f0f4e5333c805696a414c05e1350 119 Gene3D G3DSA:3.30.70.100 4 103 5.5E-31 T 23-10-2018 DLM_0706 11a7f0f4e5333c805696a414c05e1350 119 Pfam PF05336 L-rhamnose mutarotase 10 105 1.1E-23 T 23-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 DLM_0706 11a7f0f4e5333c805696a414c05e1350 119 SUPERFAMILY SSF54909 10 109 1.07E-30 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 7.5E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 7.5E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 7.5E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 SUPERFAMILY SSF46785 1 60 7.76E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 8.0E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 SMART SM00344 1 107 5.6E-39 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 Gene3D G3DSA:3.30.70.920 53 135 7.1E-21 T 23-10-2018 DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 Pfam PF01037 Lrp/AsnC ligand binding domain 67 132 8.3E-14 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 Gene3D G3DSA:1.10.10.10 1 52 1.3E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 23-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DLM_3749 77b6c5613caca4e16c2e0e5ecc58a608 147 SUPERFAMILY SSF54909 62 134 8.45E-14 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_3614 839dbc5c11fcf554a3c286055d6caf95 276 Gene3D G3DSA:3.40.50.1820 1 253 4.7E-47 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3614 839dbc5c11fcf554a3c286055d6caf95 276 SUPERFAMILY SSF53474 3 254 3.15E-33 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3614 839dbc5c11fcf554a3c286055d6caf95 276 Pfam PF12146 Serine aminopeptidase, S33 3 238 2.2E-14 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 DLM_3614 839dbc5c11fcf554a3c286055d6caf95 276 PIRSF PIRSF017388 3 123 8.7E-24 T 23-10-2018 IPR012354 Esterase/lipase GO:0052689 DLM_3614 839dbc5c11fcf554a3c286055d6caf95 276 PIRSF PIRSF017388 143 256 4.1E-13 T 23-10-2018 IPR012354 Esterase/lipase GO:0052689 DLM_1049 a3782449dc4ab7608223e6ff3f56465f 183 SUPERFAMILY SSF54001 57 181 1.67E-34 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DLM_1049 a3782449dc4ab7608223e6ff3f56465f 183 Pfam PF00877 NlpC/P60 family 75 179 1.0E-25 T 23-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DLM_1049 a3782449dc4ab7608223e6ff3f56465f 183 Gene3D G3DSA:3.90.1720.10 27 175 1.9E-35 T 23-10-2018 DLM_4268 5c6c52a212a48f34e5c011ce57ec2a20 244 Gene3D G3DSA:2.40.50.40 131 198 1.1E-10 T 23-10-2018 DLM_4268 5c6c52a212a48f34e5c011ce57ec2a20 244 SMART SM00850 140 240 3.4E-17 T 23-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DLM_4268 5c6c52a212a48f34e5c011ce57ec2a20 244 Pfam PF00072 Response regulator receiver domain 9 117 1.3E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4268 5c6c52a212a48f34e5c011ce57ec2a20 244 Pfam PF04397 LytTr DNA-binding domain 140 239 3.4E-21 T 23-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DLM_4268 5c6c52a212a48f34e5c011ce57ec2a20 244 SUPERFAMILY SSF52172 5 121 1.27E-31 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4268 5c6c52a212a48f34e5c011ce57ec2a20 244 Gene3D G3DSA:3.40.50.2300 4 127 2.4E-30 T 23-10-2018 DLM_4268 5c6c52a212a48f34e5c011ce57ec2a20 244 SMART SM00448 7 117 1.7E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1288 ca5d01729e6cf4eb73371ef80c1c717c 246 Gene3D G3DSA:3.40.50.300 13 168 5.6E-9 T 23-10-2018 DLM_1288 ca5d01729e6cf4eb73371ef80c1c717c 246 Pfam PF13401 AAA domain 34 147 2.6E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1288 ca5d01729e6cf4eb73371ef80c1c717c 246 SUPERFAMILY SSF52540 33 221 7.48E-14 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0531 65b2b84f72272fabd7171c2265096f95 445 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 7 438 8.2E-81 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_0531 65b2b84f72272fabd7171c2265096f95 445 Gene3D G3DSA:1.20.1600.10 20 439 1.3E-111 T 23-10-2018 DLM_0531 65b2b84f72272fabd7171c2265096f95 445 SUPERFAMILY SSF56954 20 441 5.1E-87 T 23-10-2018 DLM_0531 65b2b84f72272fabd7171c2265096f95 445 Gene3D G3DSA:2.20.200.10 66 327 1.3E-111 T 23-10-2018 DLM_0531 65b2b84f72272fabd7171c2265096f95 445 Pfam PF02321 Outer membrane efflux protein 29 224 1.0E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_0531 65b2b84f72272fabd7171c2265096f95 445 Pfam PF02321 Outer membrane efflux protein 256 428 2.1E-22 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 Pfam PF02743 Cache domain 56 300 4.0E-14 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 Gene3D G3DSA:3.30.450.20 81 202 1.9E-69 T 23-10-2018 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 Gene3D G3DSA:3.30.565.10 478 632 2.3E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 SUPERFAMILY SSF103190 113 214 1.18E-16 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 628 4.8E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 SMART SM00387 521 630 1.3E-28 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 SUPERFAMILY SSF47384 407 479 3.34E-8 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 Gene3D G3DSA:1.10.287.130 387 474 1.7E-13 T 23-10-2018 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 SMART SM00388 411 479 3.9E-5 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 627 3.3E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 574 3.3E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 608 3.3E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 588 3.3E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 PIRSF PIRSF036431 14 632 3.8E-185 T 23-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 Gene3D G3DSA:3.30.450.20 73 307 1.9E-69 T 23-10-2018 DLM_1933 cf7693bc42662421f2e8c6142281ad32 632 SUPERFAMILY SSF55874 470 626 9.82E-37 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1903 cb19816eff13fc9ce8db47602d9f00c1 297 PIRSF PIRSF037505 2 297 9.8E-11 T 23-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DLM_1903 cb19816eff13fc9ce8db47602d9f00c1 297 Gene3D G3DSA:3.20.20.330 1 297 7.4E-73 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DLM_1903 cb19816eff13fc9ce8db47602d9f00c1 297 SUPERFAMILY SSF82282 3 296 1.57E-81 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DLM_1903 cb19816eff13fc9ce8db47602d9f00c1 297 Pfam PF02574 Homocysteine S-methyltransferase 5 295 1.5E-61 T 23-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DLM_0306 ea4787ac53d373bd5aa25501e5be47ed 85 Gene3D G3DSA:3.30.1070.10 20 79 1.6E-28 T 23-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 DLM_0306 ea4787ac53d373bd5aa25501e5be47ed 85 SUPERFAMILY SSF55229 33 83 1.15E-15 T 23-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 DLM_0306 ea4787ac53d373bd5aa25501e5be47ed 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 83 19.141 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DLM_0306 ea4787ac53d373bd5aa25501e5be47ed 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 5.3E-31 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DLM_0306 ea4787ac53d373bd5aa25501e5be47ed 85 Pfam PF03776 Septum formation topological specificity factor MinE 14 81 1.6E-25 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DLM_1979 699d90a8325a78414a1d2821b628260b 433 Pfam PF07690 Major Facilitator Superfamily 41 377 1.4E-28 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1979 699d90a8325a78414a1d2821b628260b 433 SUPERFAMILY SSF103473 12 433 1.22E-59 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1979 699d90a8325a78414a1d2821b628260b 433 Gene3D G3DSA:1.20.1250.20 20 433 1.7E-57 T 23-10-2018 DLM_0082 04f5db9e8fc37ffd645e43bb591417f7 406 Gene3D G3DSA:1.20.81.30 258 369 2.0E-32 T 23-10-2018 DLM_0082 04f5db9e8fc37ffd645e43bb591417f7 406 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 3.5E-34 T 23-10-2018 IPR018076 Type II secretion system F domain DLM_0082 04f5db9e8fc37ffd645e43bb591417f7 406 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 5.7E-32 T 23-10-2018 IPR018076 Type II secretion system F domain DLM_0082 04f5db9e8fc37ffd645e43bb591417f7 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.6E-17 T 23-10-2018 IPR003004 GspF/PilC family DLM_0082 04f5db9e8fc37ffd645e43bb591417f7 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.6E-17 T 23-10-2018 IPR003004 GspF/PilC family DLM_0082 04f5db9e8fc37ffd645e43bb591417f7 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 4.6E-17 T 23-10-2018 IPR003004 GspF/PilC family DLM_0082 04f5db9e8fc37ffd645e43bb591417f7 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 4.6E-17 T 23-10-2018 IPR003004 GspF/PilC family DLM_0082 04f5db9e8fc37ffd645e43bb591417f7 406 Gene3D G3DSA:1.20.81.30 58 173 3.0E-31 T 23-10-2018 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 Pfam PF01084 Ribosomal protein S18 19 69 4.9E-24 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 22 74 4.0E-24 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 Gene3D G3DSA:4.10.640.10 1 75 2.7E-26 T 23-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 74 21.058 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 73 1.9E-33 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 SUPERFAMILY SSF46911 3 75 2.62E-28 T 23-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 8.2E-18 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 8.2E-18 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 8.2E-18 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3125 6ee3248b86e3571b0327486dc0b38c60 75 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 8.2E-18 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 SUPERFAMILY SSF100950 75 236 1.26E-23 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 23-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 SMART SM01134 73 234 4.1E-67 T 23-10-2018 DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 Gene3D G3DSA:1.10.10.10 1 59 2.1E-7 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 SMART SM00420 7 59 1.4E-14 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 6.4E-16 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 4.1E-7 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 4.1E-7 T 23-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 Pfam PF00455 DeoR C terminal sensor domain 76 233 7.3E-50 T 23-10-2018 IPR014036 DeoR C-terminal sensor domain DLM_3899 707ca2ac5cc1e379813d47d0489b1845 254 SUPERFAMILY SSF46785 4 74 6.28E-13 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2771 2619f0a12b1c10d0a2ebf8136aca3bb0 137 Pfam PF04343 Protein of unknown function, DUF488 36 111 1.8E-7 T 23-10-2018 IPR007438 Protein of unknown function DUF488 DLM_1940 a409386af4f36fe1a7228b31c6119b97 41 SUPERFAMILY SSF55729 1 28 5.59E-6 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_1940 a409386af4f36fe1a7228b31c6119b97 41 Gene3D G3DSA:3.40.630.30 1 40 8.2E-6 T 23-10-2018 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 PIRSF PIRSF001492 2 508 2.2E-194 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 Pfam PF01676 Metalloenzyme superfamily 9 495 4.9E-71 T 23-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 Gene3D G3DSA:3.40.1450.10 81 308 1.4E-204 T 23-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 SUPERFAMILY SSF64158 81 306 9.29E-75 T 23-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 295 4.0E-74 T 23-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 SUPERFAMILY SSF53649 9 506 1.7E-70 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 Gene3D G3DSA:3.40.720.10 9 504 1.4E-204 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 9 506 3.7E-212 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_0236 6869f2fa5bacde886e0709e49f78d3d9 509 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 8 507 48.176 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DLM_3901 dfbb6f69d80213635a6789c3b46f00fe 201 Pfam PF01810 LysE type translocator 13 199 2.3E-28 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 Gene3D G3DSA:3.10.290.10 2 60 1.3E-17 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 SMART SM00363 4 66 3.1E-7 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 4 297 1.2E-95 T 23-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 121 135 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 SUPERFAMILY SSF55174 4 53 7.91E-9 T 23-10-2018 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 SUPERFAMILY SSF55120 64 297 2.67E-78 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 Pfam PF00849 RNA pseudouridylate synthase 78 228 9.5E-33 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 Gene3D G3DSA:3.30.2350.10 71 299 1.2E-73 T 23-10-2018 DLM_1880 98a848b531f3bf54520da15eaa043a63 337 Pfam PF01479 S4 domain 4 48 7.5E-11 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 SUPERFAMILY SSF82693 565 664 3.35E-23 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 SUPERFAMILY SSF82714 719 801 2.09E-18 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 SUPERFAMILY SSF82866 804 1023 8.37E-44 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 SUPERFAMILY SSF82693 135 329 2.62E-27 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 9.2E-98 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Gene3D G3DSA:3.30.2090.10 716 804 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Gene3D G3DSA:3.30.70.1430 567 663 0.0 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 SUPERFAMILY SSF82693 38 132 2.79E-23 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Pfam PF00873 AcrB/AcrD/AcrF family 1 1020 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Gene3D G3DSA:1.20.1640.10 513 1017 0.0 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 SUPERFAMILY SSF82866 296 497 8.89E-51 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 SUPERFAMILY SSF82714 183 272 1.06E-21 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Gene3D G3DSA:3.30.70.1430 38 812 0.0 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 Gene3D G3DSA:3.30.70.1440 664 860 0.0 T 23-10-2018 DLM_1699 b6a2f041662bbe7b51fcd21c4bb608aa 1045 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1025 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 SMART SM01005 225 349 4.3E-63 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 25 35 - T 23-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 Gene3D G3DSA:3.20.20.10 5 209 3.8E-117 T 23-10-2018 IPR029066 PLP-binding barrel DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 TIGRFAM TIGR00492 alr: alanine racemase 1 349 1.5E-104 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 Hamap MF_01201 Alanine racemase. 1 349 31.915 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 149 160 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 279 296 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 331 344 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 20 36 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 55 73 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 258 273 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 241 256 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 115 127 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 PRINTS PR00992 Alanine racemase signature 184 211 9.3E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 SUPERFAMILY SSF50621 219 348 2.89E-45 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 Pfam PF01168 Alanine racemase, N-terminal domain 3 211 5.6E-62 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 Pfam PF00842 Alanine racemase, C-terminal domain 226 347 2.8E-42 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 Gene3D G3DSA:2.40.37.10 3 346 3.8E-117 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_0105 5f5ec6350ec77a19d9d16eebe7852c6c 349 SUPERFAMILY SSF51419 3 224 2.88E-61 T 23-10-2018 IPR029066 PLP-binding barrel DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 Gene3D G3DSA:1.10.285.10 5 380 2.3E-162 T 23-10-2018 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 6.7E-31 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 6.7E-31 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 6.7E-31 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 369 380 6.7E-31 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 Gene3D G3DSA:3.40.50.10860 52 187 2.3E-162 T 23-10-2018 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 PIRSF PIRSF000185 19 445 1.5E-112 T 23-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 SMART SM00839 201 443 6.2E-88 T 23-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 181 1.0E-50 T 23-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 443 5.0E-84 T 23-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 23-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 Gene3D G3DSA:3.40.50.720 206 370 2.3E-162 T 23-10-2018 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 SUPERFAMILY SSF53223 4 193 5.76E-71 T 23-10-2018 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 Gene3D G3DSA:1.10.285.10 381 445 5.9E-10 T 23-10-2018 DLM_1794 a7be4cb8458e7aa08cbde6d3bd37f193 445 SUPERFAMILY SSF51735 199 444 1.77E-72 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1580 3d57bfb6c3cc7566c14e3957cfa668b9 619 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 618 1.4E-219 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like DLM_1580 3d57bfb6c3cc7566c14e3957cfa668b9 619 PIRSF PIRSF028304 1 618 1.5E-204 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like DLM_1580 3d57bfb6c3cc7566c14e3957cfa668b9 619 Pfam PF05947 Type VI secretion system, TssF 6 616 2.2E-212 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like DLM_1848 481f0e3d551e5c19940d025d2315fa27 347 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 7 241 2.8E-34 T 23-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal DLM_1848 481f0e3d551e5c19940d025d2315fa27 347 SUPERFAMILY SSF56235 7 316 5.32E-57 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_1848 481f0e3d551e5c19940d025d2315fa27 347 Gene3D G3DSA:3.60.60.10 4 344 5.2E-83 T 23-10-2018 DLM_1925 68191626240ac9e610bb6bb0bb7707cb 400 Gene3D G3DSA:1.20.1250.20 1 188 8.2E-37 T 23-10-2018 DLM_1925 68191626240ac9e610bb6bb0bb7707cb 400 SUPERFAMILY SSF103473 10 390 7.06E-57 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1925 68191626240ac9e610bb6bb0bb7707cb 400 Pfam PF07690 Major Facilitator Superfamily 23 349 1.1E-37 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1925 68191626240ac9e610bb6bb0bb7707cb 400 Gene3D G3DSA:1.20.1250.20 196 391 2.4E-48 T 23-10-2018 DLM_0630 b4455f9bf7db83f379608f3870b3ba65 275 Pfam PF17409 MoaF C-terminal domain 158 271 1.6E-51 T 23-10-2018 IPR035348 MoaF, C-terminal domain DLM_0630 b4455f9bf7db83f379608f3870b3ba65 275 Pfam PF10703 MoaF N-terminal domain 6 116 1.1E-21 T 23-10-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal DLM_0075 f1bccce5b93334b364b1dc2b0fd1a731 300 Gene3D G3DSA:3.30.1490.20 118 185 5.4E-9 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_0075 f1bccce5b93334b364b1dc2b0fd1a731 300 SUPERFAMILY SSF56059 103 275 2.3E-16 T 23-10-2018 DLM_0075 f1bccce5b93334b364b1dc2b0fd1a731 300 Gene3D G3DSA:3.40.50.20 72 92 5.4E-9 T 23-10-2018 DLM_0075 f1bccce5b93334b364b1dc2b0fd1a731 300 Gene3D G3DSA:3.30.470.20 93 241 5.4E-9 T 23-10-2018 DLM_0075 f1bccce5b93334b364b1dc2b0fd1a731 300 Pfam PF08443 RimK-like ATP-grasp domain 158 269 1.1E-7 T 23-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 DLM_1121 c35ea44b139778fa44ec41208a387827 533 SUPERFAMILY SSF51905 99 526 4.12E-36 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1121 c35ea44b139778fa44ec41208a387827 533 PIRSF PIRSF038984 1 533 6.4E-242 T 23-10-2018 IPR028348 FAD dependent protein DLM_1121 c35ea44b139778fa44ec41208a387827 533 Gene3D G3DSA:3.50.50.60 84 311 2.9E-86 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1121 c35ea44b139778fa44ec41208a387827 533 Gene3D G3DSA:3.50.50.60 466 531 1.9E-14 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1121 c35ea44b139778fa44ec41208a387827 533 Gene3D G3DSA:3.30.70.2700 1 79 2.1E-21 T 23-10-2018 DLM_1121 c35ea44b139778fa44ec41208a387827 533 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 99 268 2.7E-7 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_3149 f3d9b54f618787e4ccafbbfeebec86d9 555 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 473 3.4E-56 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DLM_3149 f3d9b54f618787e4ccafbbfeebec86d9 555 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 182 207 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site DLM_3149 f3d9b54f618787e4ccafbbfeebec86d9 555 Pfam PF00474 Sodium:solute symporter family 67 473 2.5E-107 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DLM_3149 f3d9b54f618787e4ccafbbfeebec86d9 555 Gene3D G3DSA:1.20.1730.10 34 550 4.1E-54 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily DLM_1762 2deab76b8212744a7cde6e40e36de600 525 PIRSF PIRSF002741 15 525 8.7E-104 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DLM_1762 2deab76b8212744a7cde6e40e36de600 525 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 94 - T 23-10-2018 IPR023765 Solute-binding protein family 5, conserved site DLM_1762 2deab76b8212744a7cde6e40e36de600 525 SUPERFAMILY SSF53850 25 524 1.38E-131 T 23-10-2018 DLM_1762 2deab76b8212744a7cde6e40e36de600 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 445 2.1E-90 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain DLM_1762 2deab76b8212744a7cde6e40e36de600 525 Gene3D G3DSA:3.40.190.10 204 513 1.1E-144 T 23-10-2018 DLM_1762 2deab76b8212744a7cde6e40e36de600 525 Gene3D G3DSA:3.10.105.10 285 500 1.1E-144 T 23-10-2018 DLM_1762 2deab76b8212744a7cde6e40e36de600 525 Gene3D G3DSA:3.90.76.10 38 203 1.1E-144 T 23-10-2018 DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 Pfam PF00005 ABC transporter 41 191 2.7E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 SUPERFAMILY SSF52540 262 501 4.3E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 SUPERFAMILY SSF52540 25 252 7.5E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 SMART SM00382 299 494 1.9E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 SMART SM00382 50 239 2.9E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 Gene3D G3DSA:3.40.50.300 13 267 4.5E-56 T 23-10-2018 DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 Pfam PF00005 ABC transporter 291 445 1.6E-21 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0557 0843f33ac1321df25c487c8fccb928d7 515 Gene3D G3DSA:3.40.50.300 280 509 1.1E-44 T 23-10-2018 DLM_0130 0e6502fd004ab42ba8e346e5df24c1fc 66 SUPERFAMILY SSF54285 2 65 9.01E-18 T 23-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DLM_0130 0e6502fd004ab42ba8e346e5df24c1fc 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 1.3E-21 T 23-10-2018 IPR010035 ThiS, thiamine-biosynthesis DLM_0130 0e6502fd004ab42ba8e346e5df24c1fc 66 Pfam PF02597 ThiS family 4 66 1.3E-16 T 23-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DLM_0130 0e6502fd004ab42ba8e346e5df24c1fc 66 Gene3D G3DSA:3.10.20.30 1 66 1.2E-20 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_1383 258dba09228871c7102ec64b63d2c385 415 SUPERFAMILY SSF56935 23 415 8.96E-58 T 23-10-2018 DLM_1383 258dba09228871c7102ec64b63d2c385 415 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 23 385 4.6E-34 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DLM_1383 258dba09228871c7102ec64b63d2c385 415 Gene3D G3DSA:2.40.160.60 22 415 9.5E-92 T 23-10-2018 DLM_1119 eafbed3248a55ca52a55f60614bf2abe 290 Gene3D G3DSA:1.10.10.10 1 80 7.1E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1119 eafbed3248a55ca52a55f60614bf2abe 290 Gene3D G3DSA:3.40.50.10490 99 282 3.8E-20 T 23-10-2018 DLM_1119 eafbed3248a55ca52a55f60614bf2abe 290 SUPERFAMILY SSF53697 100 261 5.0E-11 T 23-10-2018 DLM_1119 eafbed3248a55ca52a55f60614bf2abe 290 SUPERFAMILY SSF46689 6 79 2.51E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1119 eafbed3248a55ca52a55f60614bf2abe 290 Pfam PF01380 SIS domain 135 257 2.0E-11 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_1119 eafbed3248a55ca52a55f60614bf2abe 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 1.4E-10 T 23-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DLM_0329 66fcb227aab80a95fbf10336328c1c9c 223 Gene3D G3DSA:1.10.10.10 5 72 6.7E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0329 66fcb227aab80a95fbf10336328c1c9c 223 Gene3D G3DSA:1.20.120.530 74 210 2.3E-13 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_0329 66fcb227aab80a95fbf10336328c1c9c 223 SUPERFAMILY SSF48008 77 201 1.49E-12 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_0329 66fcb227aab80a95fbf10336328c1c9c 223 SUPERFAMILY SSF46785 4 93 1.44E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0329 66fcb227aab80a95fbf10336328c1c9c 223 Pfam PF07729 FCD domain 82 197 1.1E-10 T 23-10-2018 IPR011711 GntR, C-terminal DLM_0329 66fcb227aab80a95fbf10336328c1c9c 223 SMART SM00895 81 206 7.3E-8 T 23-10-2018 IPR011711 GntR, C-terminal DLM_0329 66fcb227aab80a95fbf10336328c1c9c 223 SMART SM00345 13 71 1.1E-12 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0329 66fcb227aab80a95fbf10336328c1c9c 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 5.8E-15 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_1819 e6c3799f696ef5eee6350f71ee4b0436 407 Pfam PF07690 Major Facilitator Superfamily 12 358 7.5E-28 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1819 e6c3799f696ef5eee6350f71ee4b0436 407 Gene3D G3DSA:1.20.1250.20 3 391 2.1E-38 T 23-10-2018 DLM_1819 e6c3799f696ef5eee6350f71ee4b0436 407 SUPERFAMILY SSF103473 6 394 3.92E-51 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2487 f86b1eac56af6354218e8762f3ca8020 109 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 14 80 3.4E-24 T 23-10-2018 IPR018720 Domain of unknown function DUF2249 DLM_2743 1067e2ab3f5d2bac40dba8f5628ab785 261 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 20 239 1.5E-62 T 23-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family DLM_2934 cafdcaf1f57f86fc7479344f79f65f36 428 Pfam PF01627 Hpt domain 339 417 5.5E-13 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2934 cafdcaf1f57f86fc7479344f79f65f36 428 SMART SM00073 328 426 0.0018 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2934 cafdcaf1f57f86fc7479344f79f65f36 428 Gene3D G3DSA:1.20.120.160 312 426 3.5E-18 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2934 cafdcaf1f57f86fc7479344f79f65f36 428 SUPERFAMILY SSF47226 316 424 2.75E-21 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_1809 c7fd2efc517c13569911d9276081d42b 198 SUPERFAMILY SSF48498 82 177 1.62E-16 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_1809 c7fd2efc517c13569911d9276081d42b 198 Gene3D G3DSA:1.10.357.10 6 190 1.1E-44 T 23-10-2018 DLM_1809 c7fd2efc517c13569911d9276081d42b 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.4E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1809 c7fd2efc517c13569911d9276081d42b 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.4E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1809 c7fd2efc517c13569911d9276081d42b 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 1.6E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1809 c7fd2efc517c13569911d9276081d42b 198 SUPERFAMILY SSF46689 3 80 5.13E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1061 14dab392033be8409f9289ec07be0118 466 Gene3D G3DSA:2.40.160.60 27 466 3.4E-134 T 23-10-2018 DLM_1061 14dab392033be8409f9289ec07be0118 466 SUPERFAMILY SSF56935 27 466 1.4E-90 T 23-10-2018 DLM_1061 14dab392033be8409f9289ec07be0118 466 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 466 2.6E-103 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DLM_2156 30d051117ab772c8f42db8c95ec7b00b 147 Gene3D G3DSA:1.10.700.10 2 128 2.4E-56 T 23-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily DLM_2156 30d051117ab772c8f42db8c95ec7b00b 147 TIGRFAM TIGR02792 PCA_ligA: protocatechuate 4,5-dioxygenase, alpha subunit 7 123 2.8E-67 T 23-10-2018 IPR014159 Protocatechuate 4,5-dioxygenase, alpha subunit KEGG: 00362+1.13.11.8|KEGG: 00624+1.13.11.8|KEGG: 00627+1.13.11.8|MetaCyc: PWY-6216|MetaCyc: PWY-6217 DLM_2156 30d051117ab772c8f42db8c95ec7b00b 147 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 27 112 4.0E-36 T 23-10-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit DLM_2156 30d051117ab772c8f42db8c95ec7b00b 147 SUPERFAMILY SSF48076 4 127 3.53E-50 T 23-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 Gene3D G3DSA:3.40.1190.10 96 310 6.4E-62 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 SUPERFAMILY SSF51984 2 96 1.28E-18 T 23-10-2018 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 Gene3D G3DSA:3.90.190.20 315 448 4.5E-43 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 Pfam PF08245 Mur ligase middle domain 115 291 4.2E-28 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 Gene3D G3DSA:3.40.50.720 1 95 9.8E-25 T 23-10-2018 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 381 4.6E-8 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 SUPERFAMILY SSF53623 109 308 1.09E-52 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 7 447 2.9E-134 T 23-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 SUPERFAMILY SSF53244 310 448 2.52E-43 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DLM_4194 569a31d679aa085ef795b6ac3b945ba4 458 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 449 34.362 T 23-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 SUPERFAMILY SSF89095 296 399 1.15E-31 T 23-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 Gene3D G3DSA:1.10.10.410 414 475 3.0E-26 T 23-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 4.3E-168 T 23-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 SMART SM00845 327 474 6.7E-79 T 23-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 Pfam PF02934 GatB/GatE catalytic domain 5 287 1.1E-108 T 23-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 Pfam PF02637 GatB domain 327 474 8.8E-52 T 23-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 23-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 37.725 T 23-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 Gene3D G3DSA:1.10.150.380 296 413 3.6E-31 T 23-10-2018 DLM_4186 50cc72c4c1b69042e9e7f1d6594f3758 475 SUPERFAMILY SSF55931 4 295 1.83E-118 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DLM_3617 56fab12b618fd3668aa8db981dbde37f 523 Gene3D G3DSA:3.30.70.270 341 514 4.1E-53 T 23-10-2018 DLM_3617 56fab12b618fd3668aa8db981dbde37f 523 Pfam PF02743 Cache domain 151 275 5.1E-12 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_3617 56fab12b618fd3668aa8db981dbde37f 523 SMART SM00267 342 514 5.1E-56 T 23-10-2018 IPR000160 GGDEF domain DLM_3617 56fab12b618fd3668aa8db981dbde37f 523 SUPERFAMILY SSF55073 358 513 2.35E-45 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3617 56fab12b618fd3668aa8db981dbde37f 523 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 510 1.4E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_3617 56fab12b618fd3668aa8db981dbde37f 523 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 512 3.2E-46 T 23-10-2018 IPR000160 GGDEF domain DLM_3617 56fab12b618fd3668aa8db981dbde37f 523 Gene3D G3DSA:3.30.450.20 131 243 2.0E-7 T 23-10-2018 DLM_0339 ba15bb83f9663adf72a6e3389255de1a 466 SUPERFAMILY SSF69572 189 339 6.67E-21 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DLM_0339 ba15bb83f9663adf72a6e3389255de1a 466 Pfam PF00899 ThiF family 177 313 2.6E-18 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DLM_0339 ba15bb83f9663adf72a6e3389255de1a 466 Gene3D G3DSA:3.40.50.720 187 430 3.7E-25 T 23-10-2018 DLM_0339 ba15bb83f9663adf72a6e3389255de1a 466 Pfam PF14464 Prokaryotic homologs of the JAB domain 10 123 3.4E-11 T 23-10-2018 IPR028090 JAB domain, prokaryotic DLM_0259 05755b0404fbbf578abcc13bd1842ff7 174 Gene3D G3DSA:3.40.50.1000 4 172 6.5E-57 T 23-10-2018 IPR023214 HAD superfamily DLM_0259 05755b0404fbbf578abcc13bd1842ff7 174 Pfam PF08282 haloacid dehalogenase-like hydrolase 86 144 1.1E-10 T 23-10-2018 DLM_0259 05755b0404fbbf578abcc13bd1842ff7 174 PIRSF PIRSF006118 1 173 5.7E-68 T 23-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DLM_0259 05755b0404fbbf578abcc13bd1842ff7 174 SUPERFAMILY SSF56784 8 170 3.88E-45 T 23-10-2018 IPR036412 HAD-like superfamily DLM_0259 05755b0404fbbf578abcc13bd1842ff7 174 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 11 163 2.2E-51 T 23-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DLM_0259 05755b0404fbbf578abcc13bd1842ff7 174 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 12 126 1.2E-15 T 23-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DLM_0738 3112a7b61e228f5b1a7198ea1336ad57 271 Gene3D G3DSA:1.10.3720.10 11 269 2.3E-46 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0738 3112a7b61e228f5b1a7198ea1336ad57 271 SUPERFAMILY SSF161098 9 259 7.48E-48 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0738 3112a7b61e228f5b1a7198ea1336ad57 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 259 1.1E-14 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 SUPERFAMILY SSF46785 6 114 2.72E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 Pfam PF03466 LysR substrate binding domain 94 291 4.2E-27 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 Gene3D G3DSA:1.10.10.10 9 95 4.2E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 Gene3D G3DSA:3.40.190.10 103 287 4.2E-51 T 23-10-2018 DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 9.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 9.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 9.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 Gene3D G3DSA:3.40.190.10 164 260 4.2E-51 T 23-10-2018 DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 SUPERFAMILY SSF53850 95 294 9.41E-29 T 23-10-2018 DLM_1426 bde9b805f2b3e170352ccb1c2eed3610 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 8.1E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1068 349a224cc0d8ff68d40b75c76ffa3f7c 314 SUPERFAMILY SSF53474 16 310 2.44E-38 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1068 349a224cc0d8ff68d40b75c76ffa3f7c 314 Gene3D G3DSA:3.40.50.1820 44 301 2.8E-25 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1068 349a224cc0d8ff68d40b75c76ffa3f7c 314 Pfam PF00561 alpha/beta hydrolase fold 55 291 2.1E-17 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_1068 349a224cc0d8ff68d40b75c76ffa3f7c 314 PIRSF PIRSF005211 1 314 3.9E-105 T 23-10-2018 IPR012020 AB hydrolase 4 family DLM_2749 c9849ccce1102fe2e43cf5b6b8cee77a 225 Pfam PF13545 Crp-like helix-turn-helix domain 153 222 5.8E-16 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_2749 c9849ccce1102fe2e43cf5b6b8cee77a 225 Gene3D G3DSA:1.10.10.10 148 223 3.2E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2749 c9849ccce1102fe2e43cf5b6b8cee77a 225 SMART SM00100 15 133 5.9E-18 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_2749 c9849ccce1102fe2e43cf5b6b8cee77a 225 Gene3D G3DSA:2.60.120.10 2 147 1.2E-37 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2749 c9849ccce1102fe2e43cf5b6b8cee77a 225 SUPERFAMILY SSF46785 150 220 8.26E-12 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2749 c9849ccce1102fe2e43cf5b6b8cee77a 225 Pfam PF00027 Cyclic nucleotide-binding domain 37 121 1.0E-16 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain DLM_2749 c9849ccce1102fe2e43cf5b6b8cee77a 225 SMART SM00419 168 216 1.3E-6 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_2749 c9849ccce1102fe2e43cf5b6b8cee77a 225 SUPERFAMILY SSF51206 9 143 9.17E-32 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like DLM_3794 7043331dc8287e509501ce61d5a9230b 334 SUPERFAMILY SSF48019 212 333 1.24E-29 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DLM_3794 7043331dc8287e509501ce61d5a9230b 334 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 332 8.6E-88 T 23-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DLM_3794 7043331dc8287e509501ce61d5a9230b 334 SUPERFAMILY SSF52540 5 210 4.41E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3794 7043331dc8287e509501ce61d5a9230b 334 Gene3D G3DSA:1.20.272.10 214 334 1.2E-28 T 23-10-2018 DLM_3794 7043331dc8287e509501ce61d5a9230b 334 Gene3D G3DSA:3.40.50.300 1 140 8.5E-49 T 23-10-2018 DLM_3794 7043331dc8287e509501ce61d5a9230b 334 Pfam PF06144 DNA polymerase III, delta subunit 21 190 9.9E-27 T 23-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DLM_3794 7043331dc8287e509501ce61d5a9230b 334 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 215 333 1.5E-8 T 23-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3794 7043331dc8287e509501ce61d5a9230b 334 Gene3D G3DSA:1.10.8.60 143 212 3.7E-26 T 23-10-2018 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 Gene3D G3DSA:3.30.450.20 70 187 3.6E-20 T 23-10-2018 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 Pfam PF00989 PAS fold 68 174 4.0E-15 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 73 183 1.4E-15 T 23-10-2018 IPR000014 PAS domain DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 1.6E-15 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 450 5.2E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 Gene3D G3DSA:1.10.287.130 188 296 5.8E-23 T 23-10-2018 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 SUPERFAMILY SSF55874 288 450 1.31E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 SMART SM00387 342 452 5.2E-29 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 2.8E-17 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 2.8E-17 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 2.8E-17 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 2.8E-17 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 Gene3D G3DSA:3.30.565.10 301 453 1.7E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 SMART SM00091 64 130 1.3E-4 T 23-10-2018 IPR000014 PAS domain DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 SMART SM00388 206 301 2.1E-4 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 SUPERFAMILY SSF55785 56 172 1.74E-17 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2355 ff4e6c9d9d9287e97de3fe3dc8e8a67c 453 SUPERFAMILY SSF47384 200 247 2.55E-7 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_3378 dd71a0f704246bbc96b87a89dad7ea1e 429 Pfam PF00202 Aminotransferase class-III 39 325 4.5E-55 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_3378 dd71a0f704246bbc96b87a89dad7ea1e 429 SUPERFAMILY SSF53383 29 401 7.54E-92 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3378 dd71a0f704246bbc96b87a89dad7ea1e 429 Gene3D G3DSA:3.40.640.10 75 304 6.9E-123 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3378 dd71a0f704246bbc96b87a89dad7ea1e 429 Gene3D G3DSA:3.90.1150.10 12 398 6.9E-123 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1635 a10d4ffd6099f495acddadefa85576b6 556 SUPERFAMILY SSF52540 1 508 1.11E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1635 a10d4ffd6099f495acddadefa85576b6 556 Gene3D G3DSA:3.40.50.300 266 551 8.1E-56 T 23-10-2018 DLM_1635 a10d4ffd6099f495acddadefa85576b6 556 PIRSF PIRSF003128 1 555 7.6E-158 T 23-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DLM_1635 a10d4ffd6099f495acddadefa85576b6 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 509 4.4E-23 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DLM_1635 a10d4ffd6099f495acddadefa85576b6 556 Gene3D G3DSA:3.40.50.300 1 207 6.4E-45 T 23-10-2018 DLM_1635 a10d4ffd6099f495acddadefa85576b6 556 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 1.1E-154 T 23-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DLM_4076 adcc68f578fe50e3ee2304766ecfa1c2 418 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 7 400 7.6E-126 T 23-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DLM_4076 adcc68f578fe50e3ee2304766ecfa1c2 418 Gene3D G3DSA:3.40.630.10 16 396 4.6E-145 T 23-10-2018 DLM_4076 adcc68f578fe50e3ee2304766ecfa1c2 418 Gene3D G3DSA:3.30.70.360 207 321 4.6E-145 T 23-10-2018 DLM_4076 adcc68f578fe50e3ee2304766ecfa1c2 418 SUPERFAMILY SSF55031 207 322 5.23E-27 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DLM_4076 adcc68f578fe50e3ee2304766ecfa1c2 418 Pfam PF01546 Peptidase family M20/M25/M40 78 399 5.4E-36 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 DLM_4076 adcc68f578fe50e3ee2304766ecfa1c2 418 SUPERFAMILY SSF53187 2 403 4.57E-88 T 23-10-2018 DLM_4076 adcc68f578fe50e3ee2304766ecfa1c2 418 PIRSF PIRSF001235 1 406 2.0E-134 T 23-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DLM_3637 de5b54a4e288b5932a85112124bfd4ee 345 SMART SM00671 129 164 1.1E-7 T 23-10-2018 IPR006597 Sel1-like repeat DLM_3637 de5b54a4e288b5932a85112124bfd4ee 345 SUPERFAMILY SSF81901 78 240 1.66E-17 T 23-10-2018 DLM_3637 de5b54a4e288b5932a85112124bfd4ee 345 Gene3D G3DSA:1.25.40.10 41 271 1.4E-19 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3666 4ded35cb9bdd2ca842876042d0dcaa69 235 ProSitePatterns PS00449 ATP synthase a subunit signature. 171 180 - T 23-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3666 4ded35cb9bdd2ca842876042d0dcaa69 235 Pfam PF00119 ATP synthase A chain 4 229 2.0E-51 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3666 4ded35cb9bdd2ca842876042d0dcaa69 235 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 235 14.142 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3666 4ded35cb9bdd2ca842876042d0dcaa69 235 SUPERFAMILY SSF81336 48 229 9.15E-39 T 23-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3666 4ded35cb9bdd2ca842876042d0dcaa69 235 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 6 229 8.2E-35 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3666 4ded35cb9bdd2ca842876042d0dcaa69 235 Gene3D G3DSA:1.20.120.220 46 235 3.2E-56 T 23-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 324 2.6E-108 T 23-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 Pfam PF00005 ABC transporter 27 168 1.3E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 Pfam PF08402 TOBE domain 280 352 1.8E-16 T 23-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 SUPERFAMILY SSF50331 246 354 1.76E-11 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 SMART SM00382 36 219 4.9E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 Gene3D G3DSA:2.40.50.940 230 352 1.6E-11 T 23-10-2018 DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 Gene3D G3DSA:2.40.50.140 287 346 1.6E-11 T 23-10-2018 DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 Gene3D G3DSA:3.40.50.300 7 229 4.6E-63 T 23-10-2018 DLM_3882 f124e1fd9aa780ba0b6f311606b4fb95 361 SUPERFAMILY SSF52540 8 250 3.73E-84 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1582 beb90dec8cfb26284ff4623fde0fdeec 708 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 54 228 1.2E-11 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_1582 beb90dec8cfb26284ff4623fde0fdeec 708 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 236 364 2.7E-15 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_2445 3086d359d544c521344fe8d4ba032c49 235 Pfam PF13860 FlgD Ig-like domain 114 191 6.9E-23 T 23-10-2018 IPR025965 FlgD Ig-like domain DLM_2445 3086d359d544c521344fe8d4ba032c49 235 Pfam PF13861 FlgD Tudor-like domain 97 231 8.8E-13 T 23-10-2018 IPR025963 FlgD Tudor-like domain DLM_2445 3086d359d544c521344fe8d4ba032c49 235 Gene3D G3DSA:2.60.40.4070 114 201 2.0E-32 T 23-10-2018 DLM_2445 3086d359d544c521344fe8d4ba032c49 235 Gene3D G3DSA:2.30.30.910 98 228 2.0E-32 T 23-10-2018 DLM_2445 3086d359d544c521344fe8d4ba032c49 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 19 89 1.8E-23 T 23-10-2018 IPR005648 Flagellar hook capping protein DLM_3535 449c6808bd5c32cf375d38d1dcda7a43 366 PIRSF PIRSF001455 5 349 4.0E-108 T 23-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DLM_3535 449c6808bd5c32cf375d38d1dcda7a43 366 Gene3D G3DSA:1.20.1090.10 173 356 4.1E-65 T 23-10-2018 DLM_3535 449c6808bd5c32cf375d38d1dcda7a43 366 Gene3D G3DSA:3.40.50.1970 1 172 4.1E-65 T 23-10-2018 DLM_3535 449c6808bd5c32cf375d38d1dcda7a43 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 343 2.7E-118 T 23-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DLM_3535 449c6808bd5c32cf375d38d1dcda7a43 366 SUPERFAMILY SSF56796 6 350 1.96E-120 T 23-10-2018 DLM_3535 449c6808bd5c32cf375d38d1dcda7a43 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 71.939 T 23-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DLM_3535 449c6808bd5c32cf375d38d1dcda7a43 366 Pfam PF01761 3-dehydroquinate synthase 67 324 1.9E-108 T 23-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 Gene3D G3DSA:3.30.565.10 278 436 9.0E-40 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 5.8E-131 T 23-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 Gene3D G3DSA:3.30.450.20 86 201 5.0E-8 T 23-10-2018 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 Pfam PF00989 PAS fold 105 157 2.1E-5 T 23-10-2018 IPR013767 PAS fold GO:0006355 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 425 3.9E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 SMART SM00091 98 164 8.1E-7 T 23-10-2018 IPR000014 PAS domain DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 SUPERFAMILY SSF55785 87 169 1.07E-7 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 271 8.1E-18 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 SMART SM00388 205 272 3.1E-18 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 SUPERFAMILY SSF47384 192 271 6.47E-19 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 SMART SM00387 316 428 2.8E-35 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 3.1E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 3.1E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 3.1E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 3.1E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 SUPERFAMILY SSF55874 261 424 2.49E-42 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 5.3E-18 T 23-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 DLM_3747 6ac5e5e2fd737d1fb3a22b325f50def7 440 Gene3D G3DSA:1.10.287.130 202 272 5.7E-23 T 23-10-2018 DLM_3466 526998dff2b0f63be351c9be304e13a7 497 PIRSF PIRSF006060 9 478 3.7E-47 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_3466 526998dff2b0f63be351c9be304e13a7 497 Gene3D G3DSA:1.20.1740.10 17 476 4.7E-39 T 23-10-2018 DLM_3466 526998dff2b0f63be351c9be304e13a7 497 Pfam PF13520 Amino acid permease 22 451 8.4E-34 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_1785 c5b78555d5e1f0e8751113c022c841e3 276 Gene3D G3DSA:2.60.120.730 152 275 1.1E-8 T 23-10-2018 DLM_1785 c5b78555d5e1f0e8751113c022c841e3 276 Gene3D G3DSA:2.60.120.730 2 134 1.3E-17 T 23-10-2018 DLM_2787 aad99e1517ef194dbab6c0327152df57 411 SUPERFAMILY SSF53850 33 393 1.21E-46 T 23-10-2018 DLM_2787 aad99e1517ef194dbab6c0327152df57 411 Gene3D G3DSA:3.40.190.10 42 347 1.5E-63 T 23-10-2018 DLM_2787 aad99e1517ef194dbab6c0327152df57 411 Pfam PF13416 Bacterial extracellular solute-binding protein 47 343 5.1E-25 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_2787 aad99e1517ef194dbab6c0327152df57 411 Gene3D G3DSA:3.40.190.10 137 385 1.5E-63 T 23-10-2018 DLM_1219 e33c18f5fd7f03f6aa59eaf048901102 94 Pfam PF01638 HxlR-like helix-turn-helix 5 78 3.4E-19 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type DLM_1219 e33c18f5fd7f03f6aa59eaf048901102 94 Gene3D G3DSA:1.10.10.10 1 93 2.9E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1219 e33c18f5fd7f03f6aa59eaf048901102 94 SUPERFAMILY SSF46785 3 86 3.95E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 390 3.2E-153 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 PIRSF PIRSF006205 3 392 3.7E-151 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 SUPERFAMILY SSF51735 2 152 2.79E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 SUPERFAMILY SSF69055 299 390 4.45E-29 T 23-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 SUPERFAMILY SSF55347 128 271 1.7E-61 T 23-10-2018 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 148 236 6.0E-38 T 23-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 Gene3D G3DSA:1.10.1740.10 309 392 4.9E-26 T 23-10-2018 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 6 389 47.051 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 Gene3D G3DSA:3.40.50.720 1 152 2.0E-53 T 23-10-2018 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 Pfam PF13288 DXP reductoisomerase C-terminal domain 268 384 7.8E-40 T 23-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DLM_1970 2597c07b0f64860be6fef27eb68aa253 393 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 134 1.4E-46 T 23-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DLM_0263 1681528761ee366ef3ff1acd0c7f43f4 550 Pfam PF00916 Sulfate permease family 10 365 1.3E-8 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DLM_0263 1681528761ee366ef3ff1acd0c7f43f4 550 Gene3D G3DSA:3.30.750.24 421 530 1.6E-10 T 23-10-2018 IPR036513 STAS domain superfamily DLM_0263 1681528761ee366ef3ff1acd0c7f43f4 550 SUPERFAMILY SSF52091 424 529 1.28E-6 T 23-10-2018 IPR036513 STAS domain superfamily DLM_3220 14bbc6d1ce551a2c850a8e3a687591e6 405 SUPERFAMILY SSF53383 8 391 1.21E-111 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3220 14bbc6d1ce551a2c850a8e3a687591e6 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 4 396 55.421 T 23-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DLM_3220 14bbc6d1ce551a2c850a8e3a687591e6 405 Pfam PF00266 Aminotransferase class-V 8 368 7.6E-88 T 23-10-2018 IPR000192 Aminotransferase class V domain DLM_3220 14bbc6d1ce551a2c850a8e3a687591e6 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 4 405 1.9E-232 T 23-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DLM_3220 14bbc6d1ce551a2c850a8e3a687591e6 405 Gene3D G3DSA:3.90.1150.10 8 376 1.3E-165 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3220 14bbc6d1ce551a2c850a8e3a687591e6 405 PIRSF PIRSF005572 5 385 7.1E-135 T 23-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DLM_3220 14bbc6d1ce551a2c850a8e3a687591e6 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 23-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DLM_3220 14bbc6d1ce551a2c850a8e3a687591e6 405 Gene3D G3DSA:3.40.640.10 19 263 1.3E-165 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2035 b9f702abee6ee2df5de1ef4a60bf260e 263 Pfam PF00005 ABC transporter 27 154 1.4E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2035 b9f702abee6ee2df5de1ef4a60bf260e 263 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2035 b9f702abee6ee2df5de1ef4a60bf260e 263 Gene3D G3DSA:3.40.50.300 3 231 3.4E-62 T 23-10-2018 DLM_2035 b9f702abee6ee2df5de1ef4a60bf260e 263 SMART SM00382 36 215 1.1E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2035 b9f702abee6ee2df5de1ef4a60bf260e 263 SUPERFAMILY SSF52540 12 210 1.98E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 Gene3D G3DSA:3.40.50.1980 183 294 1.7E-43 T 23-10-2018 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00690 Adhesin family signature 52 65 1.0E-30 T 23-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00690 Adhesin family signature 234 252 1.0E-30 T 23-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00690 Adhesin family signature 260 279 1.0E-30 T 23-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00690 Adhesin family signature 21 39 1.0E-30 T 23-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00690 Adhesin family signature 65 82 1.0E-30 T 23-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00690 Adhesin family signature 181 202 1.0E-30 T 23-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 SUPERFAMILY SSF53807 20 293 2.01E-85 T 23-10-2018 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00691 Adhesin B signature 181 198 4.2E-31 T 23-10-2018 IPR006129 Adhesin B GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00691 Adhesin B signature 65 84 4.2E-31 T 23-10-2018 IPR006129 Adhesin B GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00691 Adhesin B signature 123 142 4.2E-31 T 23-10-2018 IPR006129 Adhesin B GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00691 Adhesin B signature 230 247 4.2E-31 T 23-10-2018 IPR006129 Adhesin B GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00691 Adhesin B signature 21 42 4.2E-31 T 23-10-2018 IPR006129 Adhesin B GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00691 Adhesin B signature 46 64 4.2E-31 T 23-10-2018 IPR006129 Adhesin B GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00691 Adhesin B signature 273 291 4.2E-31 T 23-10-2018 IPR006129 Adhesin B GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 PRINTS PR00691 Adhesin B signature 252 270 4.2E-31 T 23-10-2018 IPR006129 Adhesin B GO:0007155 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 Pfam PF01297 Zinc-uptake complex component A periplasmic 24 292 1.7E-76 T 23-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DLM_1184 3274652b02d2d580a67097a4dbbc9dc2 295 Gene3D G3DSA:3.40.50.1980 20 182 1.9E-48 T 23-10-2018 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 Gene3D G3DSA:3.40.50.300 148 335 4.8E-63 T 23-10-2018 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 SUPERFAMILY SSF52540 169 405 1.88E-69 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 Gene3D G3DSA:1.10.8.60 336 414 3.5E-21 T 23-10-2018 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 Gene3D G3DSA:3.40.50.2300 4 140 9.4E-32 T 23-10-2018 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 Gene3D G3DSA:1.10.10.60 415 479 2.6E-14 T 23-10-2018 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 458 478 6.0E-9 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 441 458 6.0E-9 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 377 386 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 188 201 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 250 265 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 Pfam PF00158 Sigma-54 interaction domain 168 330 1.1E-66 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 SMART SM00382 184 327 5.5E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 SMART SM00448 5 116 2.6E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 Pfam PF00072 Response regulator receiver domain 7 116 1.0E-19 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 SUPERFAMILY SSF52172 5 208 1.57E-36 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 SUPERFAMILY SSF46689 377 477 2.96E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2346 7f13eac3eb23f9f3eaf3e28095dd0b50 479 Pfam PF02954 Bacterial regulatory protein, Fis family 435 475 3.7E-11 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_4173 10dbac825ae4ad1bb19ebc25d3f37f00 214 Pfam PF01914 MarC family integral membrane protein 8 210 1.1E-50 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_4173 10dbac825ae4ad1bb19ebc25d3f37f00 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 207 2.2E-40 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_1222 7d4610610c9098d51693e7e1e7844824 205 SUPERFAMILY SSF46689 12 94 1.9E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1222 7d4610610c9098d51693e7e1e7844824 205 Gene3D G3DSA:1.10.357.10 14 204 3.1E-29 T 23-10-2018 DLM_1222 7d4610610c9098d51693e7e1e7844824 205 SUPERFAMILY SSF48498 91 204 1.66E-10 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_1222 7d4610610c9098d51693e7e1e7844824 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 4.3E-12 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1222 7d4610610c9098d51693e7e1e7844824 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 5.3E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1222 7d4610610c9098d51693e7e1e7844824 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 5.3E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2247 557b0f3d6957f5cd2cec28f123629c46 335 Pfam PF07885 Ion channel 26 97 4.7E-13 T 23-10-2018 IPR013099 Potassium channel domain DLM_2247 557b0f3d6957f5cd2cec28f123629c46 335 SUPERFAMILY SSF81324 11 139 2.49E-23 T 23-10-2018 DLM_2247 557b0f3d6957f5cd2cec28f123629c46 335 SUPERFAMILY SSF51735 117 262 7.05E-33 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2247 557b0f3d6957f5cd2cec28f123629c46 335 Gene3D G3DSA:3.40.50.720 121 257 4.4E-33 T 23-10-2018 DLM_2247 557b0f3d6957f5cd2cec28f123629c46 335 Gene3D G3DSA:1.10.287.70 5 120 5.8E-20 T 23-10-2018 DLM_2247 557b0f3d6957f5cd2cec28f123629c46 335 Pfam PF02254 TrkA-N domain 123 237 1.4E-25 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DLM_1483 a540a9d02b9c88d4d841537f92140aa3 768 Pfam PF07715 TonB-dependent Receptor Plug Domain 116 215 4.3E-16 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_1483 a540a9d02b9c88d4d841537f92140aa3 768 SMART SM00965 28 79 2.3E-7 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DLM_1483 a540a9d02b9c88d4d841537f92140aa3 768 Gene3D G3DSA:2.170.130.10 98 222 9.6E-32 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DLM_1483 a540a9d02b9c88d4d841537f92140aa3 768 Gene3D G3DSA:3.55.50.30 2 97 9.8E-21 T 23-10-2018 DLM_1483 a540a9d02b9c88d4d841537f92140aa3 768 Pfam PF00593 TonB dependent receptor 306 765 8.6E-53 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DLM_1483 a540a9d02b9c88d4d841537f92140aa3 768 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 118 766 2.6E-101 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DLM_1483 a540a9d02b9c88d4d841537f92140aa3 768 SUPERFAMILY SSF56935 80 767 4.58E-124 T 23-10-2018 DLM_1483 a540a9d02b9c88d4d841537f92140aa3 768 Gene3D G3DSA:2.40.170.20 223 768 6.4E-148 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_3023 ce307f960901cdf2161158aec468c5e6 369 SUPERFAMILY SSF56935 21 369 1.28E-53 T 23-10-2018 DLM_3023 ce307f960901cdf2161158aec468c5e6 369 Pfam PF13609 Gram-negative porin 7 345 3.6E-41 T 23-10-2018 DLM_3023 ce307f960901cdf2161158aec468c5e6 369 PRINTS PR00184 Neisseria sp. porin signature 50 75 8.8E-18 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_3023 ce307f960901cdf2161158aec468c5e6 369 PRINTS PR00184 Neisseria sp. porin signature 191 208 8.8E-18 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_3023 ce307f960901cdf2161158aec468c5e6 369 PRINTS PR00184 Neisseria sp. porin signature 223 243 8.8E-18 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_3023 ce307f960901cdf2161158aec468c5e6 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.3E-7 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_3023 ce307f960901cdf2161158aec468c5e6 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 48 59 1.3E-7 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_3023 ce307f960901cdf2161158aec468c5e6 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 292 309 1.3E-7 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_3023 ce307f960901cdf2161158aec468c5e6 369 Gene3D G3DSA:2.40.160.10 7 369 6.7E-64 T 23-10-2018 IPR023614 Porin domain superfamily DLM_3106 8bc9dd4d81a39fb757dc78bb60f8485b 281 Pfam PF00563 EAL domain 35 265 3.7E-57 T 23-10-2018 IPR001633 EAL domain DLM_3106 8bc9dd4d81a39fb757dc78bb60f8485b 281 Gene3D G3DSA:3.20.20.450 30 281 1.7E-68 T 23-10-2018 IPR035919 EAL domain superfamily DLM_3106 8bc9dd4d81a39fb757dc78bb60f8485b 281 SMART SM00052 26 270 9.6E-49 T 23-10-2018 IPR001633 EAL domain DLM_3106 8bc9dd4d81a39fb757dc78bb60f8485b 281 SUPERFAMILY SSF141868 31 278 2.48E-65 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2313 3d17b2af9475d2226706058a071d9541 315 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 271 297 - T 23-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 DLM_2313 3d17b2af9475d2226706058a071d9541 315 Pfam PF01148 Cytidylyltransferase family 45 312 3.0E-61 T 23-10-2018 DLM_0452 3a03ca45fcc99ded34e397911b328b09 522 Gene3D G3DSA:1.10.3720.10 324 520 5.2E-24 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0452 3a03ca45fcc99ded34e397911b328b09 522 Gene3D G3DSA:1.10.3720.10 67 274 6.1E-28 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0452 3a03ca45fcc99ded34e397911b328b09 522 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 301 521 4.9E-66 T 23-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DLM_0452 3a03ca45fcc99ded34e397911b328b09 522 SUPERFAMILY SSF161098 329 513 4.09E-26 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0452 3a03ca45fcc99ded34e397911b328b09 522 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 353 515 3.6E-8 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0452 3a03ca45fcc99ded34e397911b328b09 522 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 261 1.4E-16 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0452 3a03ca45fcc99ded34e397911b328b09 522 SUPERFAMILY SSF161098 72 261 3.92E-26 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3806 846759b613b7cef24f60a64dc32fa174 200 Gene3D G3DSA:3.40.50.1240 1 190 4.1E-40 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_3806 846759b613b7cef24f60a64dc32fa174 200 SUPERFAMILY SSF53254 1 188 6.0E-39 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_3806 846759b613b7cef24f60a64dc32fa174 200 SMART SM00855 5 156 1.4E-14 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_3806 846759b613b7cef24f60a64dc32fa174 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 187 3.5E-38 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.4E-6 T 23-10-2018 DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 344 360 5.4E-6 T 23-10-2018 DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 Gene3D G3DSA:3.30.70.20 445 539 2.6E-38 T 23-10-2018 DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 4.4E-7 T 23-10-2018 DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 Gene3D G3DSA:3.30.9.90 79 444 2.8E-206 T 23-10-2018 DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 Gene3D G3DSA:3.50.50.60 7 381 2.8E-206 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 SUPERFAMILY SSF51905 6 442 3.85E-56 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 SUPERFAMILY SSF54862 444 544 7.73E-28 T 23-10-2018 DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 SUPERFAMILY SSF54373 205 301 6.67E-37 T 23-10-2018 DLM_4528 62f3df8beb4671256f1cc9eec9c5e5dd 544 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 440 541 4.7E-50 T 23-10-2018 DLM_4363 5956d7fe4996b683b9e25be4a1b5e419 595 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 386 559 8.1E-30 T 23-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal DLM_4363 5956d7fe4996b683b9e25be4a1b5e419 595 Pfam PF04932 O-Antigen ligase 202 362 1.8E-14 T 23-10-2018 IPR007016 O-antigen ligase-related DLM_4363 5956d7fe4996b683b9e25be4a1b5e419 595 Pfam PF15864 Protein glycosylation ligase 163 188 1.1E-9 T 23-10-2018 IPR031726 Protein glycosylation ligase domain DLM_1791 bb227df94e243389edb747e8823e4ac3 350 SUPERFAMILY SSF51430 1 350 1.44E-103 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_1791 bb227df94e243389edb747e8823e4ac3 350 Pfam PF00248 Aldo/keto reductase family 16 341 2.0E-65 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain DLM_1791 bb227df94e243389edb747e8823e4ac3 350 PRINTS PR00069 Aldo-keto reductase signature 168 185 1.9E-9 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_1791 bb227df94e243389edb747e8823e4ac3 350 PRINTS PR00069 Aldo-keto reductase signature 119 137 1.9E-9 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_1791 bb227df94e243389edb747e8823e4ac3 350 Gene3D G3DSA:3.20.20.100 1 350 3.7E-128 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_3703 e5b0c4c2fd7bfb46fb6d666c08bf3043 107 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 23-10-2018 IPR019808 Histidine triad, conserved site DLM_3703 e5b0c4c2fd7bfb46fb6d666c08bf3043 107 PRINTS PR00332 Histidine triad family signature 5 21 2.7E-19 T 23-10-2018 IPR001310 Histidine triad (HIT) protein DLM_3703 e5b0c4c2fd7bfb46fb6d666c08bf3043 107 PRINTS PR00332 Histidine triad family signature 93 103 2.7E-19 T 23-10-2018 IPR001310 Histidine triad (HIT) protein DLM_3703 e5b0c4c2fd7bfb46fb6d666c08bf3043 107 PRINTS PR00332 Histidine triad family signature 26 44 2.7E-19 T 23-10-2018 IPR001310 Histidine triad (HIT) protein DLM_3703 e5b0c4c2fd7bfb46fb6d666c08bf3043 107 Pfam PF01230 HIT domain 12 105 1.3E-22 T 23-10-2018 IPR001310 Histidine triad (HIT) protein DLM_3703 e5b0c4c2fd7bfb46fb6d666c08bf3043 107 SUPERFAMILY SSF54197 1 104 1.98E-37 T 23-10-2018 IPR036265 HIT-like superfamily DLM_3703 e5b0c4c2fd7bfb46fb6d666c08bf3043 107 Gene3D G3DSA:3.30.428.10 1 107 3.2E-39 T 23-10-2018 IPR036265 HIT-like superfamily DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 Gene3D G3DSA:3.30.450.20 161 298 1.5E-21 T 23-10-2018 DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 SMART SM00471 316 451 2.4E-8 T 23-10-2018 IPR003607 HD/PDEase domain DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 Pfam PF08448 PAS fold 183 292 7.4E-13 T 23-10-2018 IPR013656 PAS fold-4 DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 180 298 1.3E-13 T 23-10-2018 IPR000014 PAS domain DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 SUPERFAMILY SSF55785 164 289 4.01E-22 T 23-10-2018 IPR035965 PAS domain superfamily DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 SMART SM00091 177 243 6.3E-5 T 23-10-2018 IPR000014 PAS domain DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 Gene3D G3DSA:1.10.3210.10 299 486 3.4E-59 T 23-10-2018 DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 Pfam PF13487 HD domain 372 433 1.6E-20 T 23-10-2018 DLM_1846 c8c70bc26b82a3078e5341cac33d89c3 495 SUPERFAMILY SSF109604 305 480 6.06E-34 T 23-10-2018 DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 464 588 1.7E-34 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 SUPERFAMILY SSF47203 284 472 8.38E-50 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 159 1.6E-15 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 Gene3D G3DSA:1.10.540.10 31 161 6.3E-20 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 Gene3D G3DSA:1.20.140.10 284 453 8.9E-46 T 23-10-2018 DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 165 268 5.9E-16 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 35 8.3E-11 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 279 447 9.6E-20 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 Gene3D G3DSA:2.40.110.10 163 283 4.2E-27 T 23-10-2018 DLM_0712 130a89d3d4c7e59796b914739f7731c1 594 SUPERFAMILY SSF56645 41 277 3.66E-57 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_4496 23540d457810dee2c9bb9e5eaaf5f94e 249 PRINTS PR01837 MgtC/SapB protein signature 86 108 8.0E-32 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_4496 23540d457810dee2c9bb9e5eaaf5f94e 249 PRINTS PR01837 MgtC/SapB protein signature 113 137 8.0E-32 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_4496 23540d457810dee2c9bb9e5eaaf5f94e 249 PRINTS PR01837 MgtC/SapB protein signature 31 50 8.0E-32 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_4496 23540d457810dee2c9bb9e5eaaf5f94e 249 PRINTS PR01837 MgtC/SapB protein signature 50 68 8.0E-32 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_4496 23540d457810dee2c9bb9e5eaaf5f94e 249 Pfam PF02308 MgtC family 30 159 1.5E-29 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_0836 91f404a93eddd284507da628c0f57d88 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 23 4.5E-23 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0836 91f404a93eddd284507da628c0f57d88 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 4.5E-23 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0836 91f404a93eddd284507da628c0f57d88 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 4.5E-23 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0836 91f404a93eddd284507da628c0f57d88 539 SMART SM00304 209 262 4.2E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_0836 91f404a93eddd284507da628c0f57d88 539 SMART SM00304 269 322 61.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_0836 91f404a93eddd284507da628c0f57d88 539 SUPERFAMILY SSF58104 230 539 1.44E-72 T 23-10-2018 DLM_0836 91f404a93eddd284507da628c0f57d88 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 506 2.8E-44 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0836 91f404a93eddd284507da628c0f57d88 539 Gene3D G3DSA:1.10.287.950 208 539 7.2E-73 T 23-10-2018 DLM_0836 91f404a93eddd284507da628c0f57d88 539 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 182 1.2E-25 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_0836 91f404a93eddd284507da628c0f57d88 539 SMART SM00283 277 538 1.9E-65 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 Pfam PF13431 Tetratricopeptide repeat 86 116 3.9E-5 T 23-10-2018 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 SUPERFAMILY SSF48452 29 200 1.64E-17 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 SMART SM00028 29 62 71.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 SMART SM00028 63 96 0.86 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 SMART SM00028 167 200 28.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 SMART SM00028 133 166 52.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 Pfam PF13181 Tetratricopeptide repeat 135 165 0.12 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 Gene3D G3DSA:1.25.40.10 24 247 1.6E-44 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_0567 ff5161fa6a86749894e60cea49f742a6 247 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 24 235 6.3E-53 T 23-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 Pfam PF05593 RHS Repeat 46 76 2.4E-6 T 23-10-2018 IPR031325 RHS repeat DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 Pfam PF05593 RHS Repeat 61 96 1.1E-10 T 23-10-2018 IPR031325 RHS repeat DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 Pfam PF05593 RHS Repeat 82 114 1.1E-7 T 23-10-2018 IPR031325 RHS repeat DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 Gene3D G3DSA:3.90.930.1 14 163 1.1E-14 T 23-10-2018 DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 Pfam PF03527 RHS protein 190 225 1.2E-13 T 23-10-2018 IPR001826 RHS protein DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 Gene3D G3DSA:2.180.10.10 174 298 1.7E-35 T 23-10-2018 DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 PRINTS PR00394 RHS protein signature 184 204 2.8E-6 T 23-10-2018 IPR001826 RHS protein DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 PRINTS PR00394 RHS protein signature 266 285 2.8E-6 T 23-10-2018 IPR001826 RHS protein DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 217 298 2.4E-28 T 23-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 82 111 6.9E-8 T 23-10-2018 IPR006530 YD repeat DLM_2643 d07dfffe1dca6db2eef07fb3eef81bcd 435 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 40 81 1.2E-8 T 23-10-2018 IPR006530 YD repeat DLM_2850 faa16821b263aad8d6773da3e7d3d9f8 296 Gene3D G3DSA:3.40.50.720 5 181 5.2E-52 T 23-10-2018 DLM_2850 faa16821b263aad8d6773da3e7d3d9f8 296 SUPERFAMILY SSF51735 8 174 2.8E-47 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2850 faa16821b263aad8d6773da3e7d3d9f8 296 SUPERFAMILY SSF48179 179 286 9.98E-32 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_2850 faa16821b263aad8d6773da3e7d3d9f8 296 Gene3D G3DSA:1.10.3660.10 182 288 9.7E-34 T 23-10-2018 DLM_2850 faa16821b263aad8d6773da3e7d3d9f8 296 Pfam PF02153 Prephenate dehydrogenase 20 277 5.0E-69 T 23-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 DLM_2574 15f9d7d226a8b704d71c31028fd6d94e 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 23-10-2018 IPR020845 AMP-binding, conserved site DLM_2574 15f9d7d226a8b704d71c31028fd6d94e 559 SUPERFAMILY SSF56801 21 556 4.32E-152 T 23-10-2018 DLM_2574 15f9d7d226a8b704d71c31028fd6d94e 559 Pfam PF00501 AMP-binding enzyme 29 461 1.4E-107 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_2574 15f9d7d226a8b704d71c31028fd6d94e 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 2.4E-20 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DLM_2574 15f9d7d226a8b704d71c31028fd6d94e 559 Gene3D G3DSA:3.30.300.310 458 558 1.2E-33 T 23-10-2018 DLM_2574 15f9d7d226a8b704d71c31028fd6d94e 559 Gene3D G3DSA:3.40.50.12780 12 457 4.2E-116 T 23-10-2018 DLM_4110 b0b0dfa6912db6ad6285d30313e4e02f 59 SUPERFAMILY SSF46955 1 55 4.21E-5 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_4110 b0b0dfa6912db6ad6285d30313e4e02f 59 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 2 48 2.6E-12 T 23-10-2018 IPR010260 DNA-binding transcriptional activator AlpA DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.031 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 SUPERFAMILY SSF50447 207 303 1.83E-30 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 Gene3D G3DSA:2.40.30.10 340 395 1.0E-28 T 23-10-2018 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.9E-33 T 23-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.5E-16 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 SUPERFAMILY SSF50465 304 396 1.09E-34 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 SUPERFAMILY SSF52540 6 221 2.74E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 7.5E-228 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.6E-56 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 2.1E-14 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 Gene3D G3DSA:3.40.50.300 1 205 7.8E-69 T 23-10-2018 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4389 01f8f97f8decbead289ecdedd5bdf4f1 396 Gene3D G3DSA:2.40.30.10 208 336 1.6E-52 T 23-10-2018 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.031 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 SUPERFAMILY SSF50447 207 303 1.83E-30 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 Gene3D G3DSA:2.40.30.10 340 395 1.0E-28 T 23-10-2018 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.9E-33 T 23-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.5E-16 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 SUPERFAMILY SSF50465 304 396 1.09E-34 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 SUPERFAMILY SSF52540 6 221 2.74E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 7.5E-228 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.6E-56 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 2.1E-14 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 Gene3D G3DSA:3.40.50.300 1 205 7.8E-69 T 23-10-2018 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.8E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_4375 01f8f97f8decbead289ecdedd5bdf4f1 396 Gene3D G3DSA:2.40.30.10 208 336 1.6E-52 T 23-10-2018 DLM_2951 7540c7b88bc8e02be78c94e5d26e5808 351 Pfam PF13190 PDGLE domain 246 338 1.7E-8 T 23-10-2018 IPR025937 PDGLE domain DLM_2951 7540c7b88bc8e02be78c94e5d26e5808 351 Gene3D G3DSA:1.10.1760.20 1 220 5.4E-70 T 23-10-2018 DLM_2951 7540c7b88bc8e02be78c94e5d26e5808 351 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 219 4.4E-58 T 23-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.8E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.8E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.8E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 Gene3D G3DSA:1.10.10.10 1 84 3.3E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 Gene3D G3DSA:3.40.190.290 91 291 1.2E-20 T 23-10-2018 DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 SUPERFAMILY SSF53850 94 291 2.71E-26 T 23-10-2018 DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.7E-23 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 Pfam PF03466 LysR substrate binding domain 87 289 6.0E-26 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0670 42e42db4349738833c1eaaaee49c49f7 298 SUPERFAMILY SSF46785 1 87 1.89E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2456 c6f70a89ce7edd5b9094e9625db8abd5 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 393 3.3E-190 T 23-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DLM_2456 c6f70a89ce7edd5b9094e9625db8abd5 400 PIRSF PIRSF001413 1 400 8.4E-166 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DLM_2456 c6f70a89ce7edd5b9094e9625db8abd5 400 SUPERFAMILY SSF53686 7 393 6.29E-146 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DLM_2456 c6f70a89ce7edd5b9094e9625db8abd5 400 Gene3D G3DSA:3.40.50.1100 58 389 1.2E-187 T 23-10-2018 DLM_2456 c6f70a89ce7edd5b9094e9625db8abd5 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 396 52.364 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DLM_2456 c6f70a89ce7edd5b9094e9625db8abd5 400 Gene3D G3DSA:3.40.50.1100 14 210 1.2E-187 T 23-10-2018 DLM_2456 c6f70a89ce7edd5b9094e9625db8abd5 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 383 8.0E-45 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DLM_2667 8bc699ba5a2ae15f7726b1fdec4ffbe5 353 Pfam PF04865 Baseplate J-like protein 66 311 8.7E-61 T 23-10-2018 IPR006949 Baseplate protein J-like DLM_3821 69d608adaafb99a429c72829dd6f1258 191 Gene3D G3DSA:3.30.700.10 10 186 1.4E-12 T 23-10-2018 DLM_3821 69d608adaafb99a429c72829dd6f1258 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 2.9E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3821 69d608adaafb99a429c72829dd6f1258 191 SUPERFAMILY SSF54523 10 104 2.83E-17 T 23-10-2018 DLM_3821 69d608adaafb99a429c72829dd6f1258 191 Pfam PF12019 Type II transport protein GspH 45 180 7.4E-11 T 23-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 DLM_3821 69d608adaafb99a429c72829dd6f1258 191 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3821 69d608adaafb99a429c72829dd6f1258 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 2.7E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3569 ede9495d09c5c987aa325daba287d094 160 Gene3D G3DSA:3.90.960.10 2 160 4.6E-43 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_3569 ede9495d09c5c987aa325daba287d094 160 Pfam PF04073 Aminoacyl-tRNA editing domain 39 149 6.5E-23 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DLM_3569 ede9495d09c5c987aa325daba287d094 160 SUPERFAMILY SSF55826 9 156 1.96E-39 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_3569 ede9495d09c5c987aa325daba287d094 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 9 157 6.9E-52 T 23-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DLM_3569 ede9495d09c5c987aa325daba287d094 160 PIRSF PIRSF006181 4 160 5.8E-47 T 23-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DLM_1472 eb2004e9b9e1a702dc4a8ed7df7d003b 365 Gene3D G3DSA:3.50.30.60 206 342 3.7E-40 T 23-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DLM_1472 eb2004e9b9e1a702dc4a8ed7df7d003b 365 SUPERFAMILY SSF141986 185 338 5.62E-42 T 23-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DLM_1472 eb2004e9b9e1a702dc4a8ed7df7d003b 365 PIRSF PIRSF028757 44 349 2.3E-70 T 23-10-2018 IPR003507 Peptidase family S66 DLM_1472 eb2004e9b9e1a702dc4a8ed7df7d003b 365 SUPERFAMILY SSF52317 49 207 5.95E-32 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1472 eb2004e9b9e1a702dc4a8ed7df7d003b 365 Pfam PF02016 LD-carboxypeptidase 51 333 9.7E-69 T 23-10-2018 IPR003507 Peptidase family S66 DLM_1472 eb2004e9b9e1a702dc4a8ed7df7d003b 365 Gene3D G3DSA:3.40.50.10740 46 204 7.5E-35 T 23-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DLM_2218 be9620d874e28b77ba02d4f51dc67865 240 SUPERFAMILY SSF53790 1 220 2.22E-33 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_2218 be9620d874e28b77ba02d4f51dc67865 240 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 204 1.1E-22 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_2218 be9620d874e28b77ba02d4f51dc67865 240 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 5 213 3.9E-28 T 23-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 DLM_2218 be9620d874e28b77ba02d4f51dc67865 240 Gene3D G3DSA:3.40.1010.10 1 120 3.5E-15 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_3280 db608799c3d11dcee8279638c7684123 428 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 428 8.5E-171 T 23-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DLM_3280 db608799c3d11dcee8279638c7684123 428 SMART SM00729 22 243 4.1E-53 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_3280 db608799c3d11dcee8279638c7684123 428 Pfam PF06969 HemN C-terminal domain 334 402 2.3E-11 T 23-10-2018 IPR010723 HemN, C-terminal DLM_3280 db608799c3d11dcee8279638c7684123 428 Pfam PF04055 Radical SAM superfamily 27 199 3.1E-21 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_3280 db608799c3d11dcee8279638c7684123 428 Gene3D G3DSA:1.10.10.920 335 428 9.5E-30 T 23-10-2018 DLM_3280 db608799c3d11dcee8279638c7684123 428 PIRSF PIRSF000167 1 425 1.3E-154 T 23-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DLM_3280 db608799c3d11dcee8279638c7684123 428 Gene3D G3DSA:3.80.30.20 1 334 2.6E-116 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DLM_3280 db608799c3d11dcee8279638c7684123 428 SUPERFAMILY SSF102114 2 414 4.97E-132 T 23-10-2018 DLM_1537 bc28cec589fe380dc3b85ab22405c4c3 321 Pfam PF13407 Periplasmic binding protein domain 35 293 3.8E-43 T 23-10-2018 IPR025997 Periplasmic binding protein DLM_1537 bc28cec589fe380dc3b85ab22405c4c3 321 SUPERFAMILY SSF53822 33 314 7.24E-53 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1537 bc28cec589fe380dc3b85ab22405c4c3 321 Gene3D G3DSA:3.40.50.2300 133 275 1.6E-75 T 23-10-2018 DLM_1537 bc28cec589fe380dc3b85ab22405c4c3 321 Gene3D G3DSA:3.40.50.2300 57 294 1.6E-75 T 23-10-2018 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 7 18 - T 23-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 3 225 38.738 T 23-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 5 226 1.8E-94 T 23-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 SUPERFAMILY SSF52313 7 231 3.66E-86 T 23-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 Gene3D G3DSA:3.40.50.10490 9 219 1.4E-81 T 23-10-2018 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 Pfam PF00318 Ribosomal protein S2 10 224 1.1E-87 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 Gene3D G3DSA:1.10.287.610 104 150 1.4E-81 T 23-10-2018 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 PRINTS PR00395 Ribosomal protein S2 signature 88 105 5.3E-34 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 PRINTS PR00395 Ribosomal protein S2 signature 7 25 5.3E-34 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 PRINTS PR00395 Ribosomal protein S2 signature 38 47 5.3E-34 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 5.3E-34 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 5.3E-34 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1976 b9d3d6f7d26e714bbd91d3f3632b4ec9 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 5.3E-34 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_0914 19ae5a228a1c848ee0a457adf5b480fc 236 Gene3D G3DSA:2.40.400.10 2 215 5.4E-16 T 23-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 DLM_0914 19ae5a228a1c848ee0a457adf5b480fc 236 Pfam PF06314 Acetoacetate decarboxylase (ADC) 8 157 4.2E-21 T 23-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 DLM_0914 19ae5a228a1c848ee0a457adf5b480fc 236 SUPERFAMILY SSF160104 4 219 2.49E-22 T 23-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 DLM_1631 4f93ca354180b41178a02fa3afeaff0f 811 Pfam PF13332 Haemagluttinin repeat 131 299 1.3E-42 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_1631 4f93ca354180b41178a02fa3afeaff0f 811 Pfam PF15527 Bacterial toxin 22 684 798 1.4E-15 T 23-10-2018 IPR029116 Bacterial toxin 22 DLM_4243 7c4cefa96aaea340589e2529c865756a 541 SUPERFAMILY SSF58104 245 540 2.88E-63 T 23-10-2018 DLM_4243 7c4cefa96aaea340589e2529c865756a 541 Gene3D G3DSA:1.10.287.950 220 541 7.4E-63 T 23-10-2018 DLM_4243 7c4cefa96aaea340589e2529c865756a 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 507 1.6E-39 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4243 7c4cefa96aaea340589e2529c865756a 541 SMART SM00283 272 540 1.9E-57 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4243 7c4cefa96aaea340589e2529c865756a 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 2.3E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4243 7c4cefa96aaea340589e2529c865756a 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 2.3E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4243 7c4cefa96aaea340589e2529c865756a 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 2.3E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_3528 186a7c909ea2f604445aca58e25639c6 790 Pfam PF00912 Transglycosylase 57 231 1.0E-65 T 23-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_3528 186a7c909ea2f604445aca58e25639c6 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 425 696 1.3E-37 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DLM_3528 186a7c909ea2f604445aca58e25639c6 790 Pfam PF17092 Penicillin-binding protein OB-like domain 318 423 5.2E-20 T 23-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_3528 186a7c909ea2f604445aca58e25639c6 790 SUPERFAMILY SSF56601 213 724 4.48E-126 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DLM_3528 186a7c909ea2f604445aca58e25639c6 790 Gene3D G3DSA:2.40.50.140 350 421 1.1E-19 T 23-10-2018 DLM_3528 186a7c909ea2f604445aca58e25639c6 790 SUPERFAMILY SSF53955 44 258 7.59E-80 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_3528 186a7c909ea2f604445aca58e25639c6 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 67 708 2.2E-198 T 23-10-2018 DLM_3528 186a7c909ea2f604445aca58e25639c6 790 Gene3D G3DSA:1.10.3810.10 51 246 1.1E-78 T 23-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_1547 e942dace5092dae63e4361c4d5e99ed2 389 SUPERFAMILY SSF56801 5 358 8.5E-23 T 23-10-2018 DLM_1547 e942dace5092dae63e4361c4d5e99ed2 389 Pfam PF00501 AMP-binding enzyme 20 135 2.1E-14 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_1547 e942dace5092dae63e4361c4d5e99ed2 389 Gene3D G3DSA:3.40.50.12780 3 174 3.6E-17 T 23-10-2018 DLM_3844 4e84a6799f510081d60b8cf86a444533 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 244 9.1E-13 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3844 4e84a6799f510081d60b8cf86a444533 263 SUPERFAMILY SSF53850 27 246 2.4E-31 T 23-10-2018 DLM_3844 4e84a6799f510081d60b8cf86a444533 263 Gene3D G3DSA:3.40.190.10 46 243 7.8E-21 T 23-10-2018 DLM_3844 4e84a6799f510081d60b8cf86a444533 263 Gene3D G3DSA:3.40.190.10 107 210 7.8E-21 T 23-10-2018 DLM_0782 8f09f999282c9754e81687c50dbd829c 514 Pfam PF06074 Protein of unknown function (DUF935) 3 509 6.5E-166 T 23-10-2018 IPR009279 Protein of unknown function DUF935 DLM_0986 a24b09bfebaa82637aa4eab51cffb580 241 SUPERFAMILY SSF75625 3 238 2.09E-97 T 23-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0986 a24b09bfebaa82637aa4eab51cffb580 241 Pfam PF01709 Transcriptional regulator 5 236 1.6E-97 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0986 a24b09bfebaa82637aa4eab51cffb580 241 Gene3D G3DSA:3.30.70.980 86 235 8.0E-54 T 23-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0986 a24b09bfebaa82637aa4eab51cffb580 241 Gene3D G3DSA:1.10.10.200 1 80 1.3E-36 T 23-10-2018 IPR017856 Integrase-like, N-terminal DLM_0986 a24b09bfebaa82637aa4eab51cffb580 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.9E-96 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0986 a24b09bfebaa82637aa4eab51cffb580 241 Gene3D G3DSA:3.30.70.980 130 205 8.0E-54 T 23-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0986 a24b09bfebaa82637aa4eab51cffb580 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.056 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3596 89da75d4ea0bae1b19d5f0e9e52c3738 140 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 3.6E-7 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3596 89da75d4ea0bae1b19d5f0e9e52c3738 140 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3596 89da75d4ea0bae1b19d5f0e9e52c3738 140 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 31 105 8.7E-12 T 23-10-2018 IPR031982 Type IV minor pilin ComP DLM_3596 89da75d4ea0bae1b19d5f0e9e52c3738 140 Gene3D G3DSA:3.30.700.50 32 138 4.3E-22 T 23-10-2018 DLM_3596 89da75d4ea0bae1b19d5f0e9e52c3738 140 SUPERFAMILY SSF54523 8 133 3.92E-12 T 23-10-2018 DLM_3596 89da75d4ea0bae1b19d5f0e9e52c3738 140 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 3.0E-6 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3355 c1743f6314d678f1b1102de5b40514a9 360 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 15 357 1.4E-124 T 23-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 DLM_3355 c1743f6314d678f1b1102de5b40514a9 360 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 8 147 4.7E-56 T 23-10-2018 DLM_3355 c1743f6314d678f1b1102de5b40514a9 360 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 165 277 9.8E-16 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_3355 c1743f6314d678f1b1102de5b40514a9 360 Gene3D G3DSA:3.10.180.10 5 159 3.1E-46 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_3355 c1743f6314d678f1b1102de5b40514a9 360 Gene3D G3DSA:3.10.180.10 160 358 2.1E-68 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_3355 c1743f6314d678f1b1102de5b40514a9 360 SUPERFAMILY SSF54593 8 344 8.48E-81 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_3355 c1743f6314d678f1b1102de5b40514a9 360 PIRSF PIRSF009283 1 358 1.4E-119 T 23-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 DLM_0237 8efb842a32b58a89068aa73f7b50cdfb 98 SUPERFAMILY SSF46785 4 95 5.53E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0237 8efb842a32b58a89068aa73f7b50cdfb 98 SMART SM00418 13 91 1.2E-24 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_0237 8efb842a32b58a89068aa73f7b50cdfb 98 Pfam PF01022 Bacterial regulatory protein, arsR family 20 65 2.1E-12 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_0237 8efb842a32b58a89068aa73f7b50cdfb 98 Gene3D G3DSA:1.10.10.10 2 93 3.4E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0237 8efb842a32b58a89068aa73f7b50cdfb 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 6.9E-14 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_0237 8efb842a32b58a89068aa73f7b50cdfb 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 45 6.9E-14 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_0237 8efb842a32b58a89068aa73f7b50cdfb 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 6.9E-14 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_0237 8efb842a32b58a89068aa73f7b50cdfb 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 6.9E-14 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DLM_0238 c91cda5e6e35088ff6b8a6fd06e907d5 151 Pfam PF14539 Domain of unknown function (DUF4442) 10 145 1.4E-23 T 23-10-2018 IPR027961 Protein of unknown function DUF4442 DLM_0238 c91cda5e6e35088ff6b8a6fd06e907d5 151 Gene3D G3DSA:3.10.129.10 8 150 1.2E-26 T 23-10-2018 DLM_0238 c91cda5e6e35088ff6b8a6fd06e907d5 151 SUPERFAMILY SSF54637 4 146 3.81E-21 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 Hamap MF_01183 Chaperone SurA [surA]. 8 427 31.23 T 23-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 Gene3D G3DSA:3.10.50.40 280 419 1.2E-38 T 23-10-2018 DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 Gene3D G3DSA:1.10.4030.30 29 277 1.7E-66 T 23-10-2018 DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 Pfam PF13616 PPIC-type PPIASE domain 284 382 1.7E-26 T 23-10-2018 DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 Pfam PF00639 PPIC-type PPIASE domain 180 272 6.3E-16 T 23-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 Pfam PF09312 SurA N-terminal domain 28 145 5.5E-36 T 23-10-2018 IPR015391 SurA N-terminal DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 Gene3D G3DSA:3.10.50.40 173 275 1.7E-66 T 23-10-2018 DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 SUPERFAMILY SSF54534 174 277 3.47E-24 T 23-10-2018 DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 SUPERFAMILY SSF109998 29 201 2.49E-37 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily DLM_4347 b78e6f68f17f72042825c5e6b167cfbf 429 SUPERFAMILY SSF54534 284 383 1.57E-31 T 23-10-2018 DLM_4181 86eef14c3fedcda6e5cc2ed2695694ee 301 PIRSF PIRSF038471 7 285 1.8E-65 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DLM_4181 86eef14c3fedcda6e5cc2ed2695694ee 301 Gene3D G3DSA:2.40.10.340 126 271 4.4E-31 T 23-10-2018 DLM_4181 86eef14c3fedcda6e5cc2ed2695694ee 301 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 10 278 2.8E-48 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DLM_4181 86eef14c3fedcda6e5cc2ed2695694ee 301 Pfam PF04085 rod shape-determining protein MreC 133 272 8.6E-36 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DLM_4181 86eef14c3fedcda6e5cc2ed2695694ee 301 Gene3D G3DSA:2.40.10.350 185 260 4.4E-31 T 23-10-2018 DLM_3916 c32db23f6d58cda8474024a972832b4a 308 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 50 187 2.0E-5 T 23-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 DLM_3916 c32db23f6d58cda8474024a972832b4a 308 SUPERFAMILY SSF53474 17 293 2.57E-25 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3916 c32db23f6d58cda8474024a972832b4a 308 Gene3D G3DSA:3.40.50.1820 44 294 1.9E-22 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4153 542522c5eceea48cd5862111bffd2d21 229 Pfam PF00753 Metallo-beta-lactamase superfamily 24 207 1.0E-32 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_4153 542522c5eceea48cd5862111bffd2d21 229 Gene3D G3DSA:3.60.15.10 16 225 1.5E-78 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_4153 542522c5eceea48cd5862111bffd2d21 229 SMART SM00849 27 207 5.9E-39 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_4153 542522c5eceea48cd5862111bffd2d21 229 SUPERFAMILY SSF56281 16 223 8.8E-57 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_2350 637c101b6eed16415ae258a67da78783 538 Gene3D G3DSA:1.10.287.950 207 538 6.9E-69 T 23-10-2018 DLM_2350 637c101b6eed16415ae258a67da78783 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 5.0E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2350 637c101b6eed16415ae258a67da78783 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 23 5.0E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2350 637c101b6eed16415ae258a67da78783 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 374 401 5.0E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2350 637c101b6eed16415ae258a67da78783 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 504 6.1E-39 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2350 637c101b6eed16415ae258a67da78783 538 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 171 6.7E-21 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_2350 637c101b6eed16415ae258a67da78783 538 SMART SM00283 276 537 2.6E-59 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2350 637c101b6eed16415ae258a67da78783 538 SUPERFAMILY SSF58104 228 538 7.59E-66 T 23-10-2018 DLM_2350 637c101b6eed16415ae258a67da78783 538 SMART SM00304 207 261 2.6E-8 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2350 637c101b6eed16415ae258a67da78783 538 Pfam PF00672 HAMP domain 209 256 3.0E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3863 21006e483e6b576bbb9a66ffbd4068ce 189 Pfam PF05728 Uncharacterised protein family (UPF0227) 3 173 6.0E-45 T 23-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DLM_3863 21006e483e6b576bbb9a66ffbd4068ce 189 Gene3D G3DSA:3.40.50.1820 1 188 8.1E-52 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3863 21006e483e6b576bbb9a66ffbd4068ce 189 SUPERFAMILY SSF53474 3 187 1.61E-16 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0641 342dd9ace06e73bb1956a1dc22d554a6 620 Gene3D G3DSA:3.30.450.20 31 182 1.5E-8 T 23-10-2018 DLM_0641 342dd9ace06e73bb1956a1dc22d554a6 620 Gene3D G3DSA:3.30.70.270 449 614 1.5E-53 T 23-10-2018 DLM_0641 342dd9ace06e73bb1956a1dc22d554a6 620 SUPERFAMILY SSF55785 321 437 2.68E-7 T 23-10-2018 IPR035965 PAS domain superfamily DLM_0641 342dd9ace06e73bb1956a1dc22d554a6 620 SMART SM00267 447 616 1.2E-50 T 23-10-2018 IPR000160 GGDEF domain DLM_0641 342dd9ace06e73bb1956a1dc22d554a6 620 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 454 613 6.0E-45 T 23-10-2018 IPR000160 GGDEF domain DLM_0641 342dd9ace06e73bb1956a1dc22d554a6 620 Pfam PF00990 Diguanylate cyclase, GGDEF domain 458 611 2.5E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_0641 342dd9ace06e73bb1956a1dc22d554a6 620 Gene3D G3DSA:3.30.450.20 317 448 5.3E-10 T 23-10-2018 DLM_0641 342dd9ace06e73bb1956a1dc22d554a6 620 SUPERFAMILY SSF55073 463 612 7.85E-44 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_1000 2868824b1cf20789e3587fe2f0a711b6 474 Gene3D G3DSA:3.40.605.10 21 467 1.9E-150 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_1000 2868824b1cf20789e3587fe2f0a711b6 474 Gene3D G3DSA:3.40.309.10 250 439 1.9E-150 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_1000 2868824b1cf20789e3587fe2f0a711b6 474 SUPERFAMILY SSF53720 2 473 6.68E-144 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_1000 2868824b1cf20789e3587fe2f0a711b6 474 Pfam PF00171 Aldehyde dehydrogenase family 15 469 3.2E-144 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0301 21edf3f810c22290976c86157c2e685d 188 ProSitePatterns PS00893 Nudix box signature. 87 108 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_0301 21edf3f810c22290976c86157c2e685d 188 Pfam PF00293 NUDIX domain 55 172 1.4E-15 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_0301 21edf3f810c22290976c86157c2e685d 188 SUPERFAMILY SSF55811 55 177 3.79E-22 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_0301 21edf3f810c22290976c86157c2e685d 188 PRINTS PR00502 NUDIX hydrolase family signature 96 111 1.1E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DLM_0301 21edf3f810c22290976c86157c2e685d 188 PRINTS PR00502 NUDIX hydrolase family signature 82 96 1.1E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DLM_0301 21edf3f810c22290976c86157c2e685d 188 Gene3D G3DSA:3.90.79.10 58 182 1.8E-23 T 23-10-2018 DLM_0615 03e5bb76c07f8c64a9bd7c7933768dfa 282 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 282 1.2E-146 T 23-10-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 DLM_0615 03e5bb76c07f8c64a9bd7c7933768dfa 282 SUPERFAMILY SSF53213 12 279 5.49E-52 T 23-10-2018 DLM_0615 03e5bb76c07f8c64a9bd7c7933768dfa 282 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 280 1.9E-73 T 23-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DLM_0615 03e5bb76c07f8c64a9bd7c7933768dfa 282 Gene3D G3DSA:3.40.830.10 1 281 7.8E-82 T 23-10-2018 DLM_2153 952509fd986512d69ab12a32df6a090e 335 PRINTS PR00069 Aldo-keto reductase signature 136 153 3.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_2153 952509fd986512d69ab12a32df6a090e 335 PRINTS PR00069 Aldo-keto reductase signature 105 123 3.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_2153 952509fd986512d69ab12a32df6a090e 335 PRINTS PR00069 Aldo-keto reductase signature 170 199 3.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_2153 952509fd986512d69ab12a32df6a090e 335 PRINTS PR00069 Aldo-keto reductase signature 41 65 3.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_2153 952509fd986512d69ab12a32df6a090e 335 Gene3D G3DSA:3.20.20.100 1 329 2.4E-109 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_2153 952509fd986512d69ab12a32df6a090e 335 Pfam PF00248 Aldo/keto reductase family 14 305 1.3E-71 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain DLM_2153 952509fd986512d69ab12a32df6a090e 335 SUPERFAMILY SSF51430 1 310 2.75E-96 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_2416 62645dd2e7322f259b47fdb30a746175 325 Pfam PF01715 IPP transferase 41 285 6.6E-85 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DLM_2416 62645dd2e7322f259b47fdb30a746175 325 Gene3D G3DSA:1.10.20.140 114 186 2.5E-96 T 23-10-2018 DLM_2416 62645dd2e7322f259b47fdb30a746175 325 Gene3D G3DSA:3.40.50.300 11 285 2.5E-96 T 23-10-2018 DLM_2416 62645dd2e7322f259b47fdb30a746175 325 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 304 28.848 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DLM_2416 62645dd2e7322f259b47fdb30a746175 325 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 285 6.4E-93 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DLM_2416 62645dd2e7322f259b47fdb30a746175 325 SUPERFAMILY SSF52540 8 155 2.94E-20 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0906 84dc4e066fe035e72ed3482dde6e4968 696 SUPERFAMILY SSF53955 522 692 9.84E-13 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_0906 84dc4e066fe035e72ed3482dde6e4968 696 Gene3D G3DSA:2.70.70.10 24 171 8.9E-14 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_0906 84dc4e066fe035e72ed3482dde6e4968 696 Gene3D G3DSA:1.10.530.70 511 692 2.6E-8 T 23-10-2018 DLM_0906 84dc4e066fe035e72ed3482dde6e4968 696 Pfam PF01551 Peptidase family M23 54 151 2.1E-9 T 23-10-2018 IPR016047 Peptidase M23 DLM_0906 84dc4e066fe035e72ed3482dde6e4968 696 SUPERFAMILY SSF51261 34 149 2.41E-9 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_1874 7c307853f3ee24e5c4e658727f652a5e 401 Pfam PF07690 Major Facilitator Superfamily 20 363 4.2E-25 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1874 7c307853f3ee24e5c4e658727f652a5e 401 Gene3D G3DSA:1.20.1250.20 4 398 1.7E-31 T 23-10-2018 DLM_1874 7c307853f3ee24e5c4e658727f652a5e 401 SUPERFAMILY SSF103473 7 397 7.46E-42 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0166 02c43b26561cc1bc48fb8af579472335 452 SUPERFAMILY SSF56059 83 346 5.66E-71 T 23-10-2018 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 SUPERFAMILY SSF52440 1 113 1.94E-48 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_0166 02c43b26561cc1bc48fb8af579472335 452 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.7E-84 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.9E-229 T 23-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 5.3E-37 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 SMART SM00878 336 441 4.8E-60 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 SUPERFAMILY SSF51246 331 446 1.73E-40 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 Gene3D G3DSA:3.30.470.130 1 449 6.8E-190 T 23-10-2018 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.5E-45 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_0166 02c43b26561cc1bc48fb8af579472335 452 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DLM_1416 ba605219bd110f089ed7e298973250aa 317 Pfam PF02574 Homocysteine S-methyltransferase 19 312 9.4E-79 T 23-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DLM_1416 ba605219bd110f089ed7e298973250aa 317 PIRSF PIRSF037505 273 316 1.0 T 23-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DLM_1416 ba605219bd110f089ed7e298973250aa 317 PIRSF PIRSF037505 4 108 1.0E-9 T 23-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DLM_1416 ba605219bd110f089ed7e298973250aa 317 Gene3D G3DSA:3.20.20.330 5 312 6.7E-115 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DLM_1416 ba605219bd110f089ed7e298973250aa 317 SUPERFAMILY SSF82282 11 315 8.37E-87 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DLM_1283 cc1b3c2340e90e994a587e40af7da511 202 Pfam PF11363 Protein of unknown function (DUF3164) 7 200 5.5E-85 T 23-10-2018 IPR021505 Bacteriophage B3, Orf6 DLM_1677 e321c5f690c3b53b752d85559bbfafc4 93 SUPERFAMILY SSF54427 3 78 1.86E-11 T 23-10-2018 IPR032710 NTF2-like domain superfamily DLM_1677 e321c5f690c3b53b752d85559bbfafc4 93 Gene3D G3DSA:3.10.450.50 1 66 2.7E-10 T 23-10-2018 DLM_0227 31f21ff5790fcff0205f65d0b18c291e 224 Gene3D G3DSA:2.70.70.10 95 221 6.8E-37 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_0227 31f21ff5790fcff0205f65d0b18c291e 224 Pfam PF01476 LysM domain 33 75 3.0E-11 T 23-10-2018 IPR018392 LysM domain DLM_0227 31f21ff5790fcff0205f65d0b18c291e 224 SUPERFAMILY SSF51261 33 221 2.3E-48 T 23-10-2018 IPR011055 Duplicated hybrid motif DLM_0227 31f21ff5790fcff0205f65d0b18c291e 224 Gene3D G3DSA:3.10.350.10 30 90 3.0E-14 T 23-10-2018 IPR036779 LysM domain superfamily DLM_0227 31f21ff5790fcff0205f65d0b18c291e 224 SMART SM00257 32 76 7.0E-11 T 23-10-2018 IPR018392 LysM domain DLM_0227 31f21ff5790fcff0205f65d0b18c291e 224 Pfam PF01551 Peptidase family M23 123 217 5.5E-31 T 23-10-2018 IPR016047 Peptidase M23 DLM_0996 12e22e4353f10bc49a2c5b364101fb79 299 SUPERFAMILY SSF46785 5 93 7.72E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0996 12e22e4353f10bc49a2c5b364101fb79 299 Gene3D G3DSA:1.10.10.10 4 94 2.6E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0996 12e22e4353f10bc49a2c5b364101fb79 299 Pfam PF03466 LysR substrate binding domain 93 293 2.1E-18 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0996 12e22e4353f10bc49a2c5b364101fb79 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.1E-21 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0996 12e22e4353f10bc49a2c5b364101fb79 299 Gene3D G3DSA:3.40.190.290 95 298 1.8E-9 T 23-10-2018 DLM_0996 12e22e4353f10bc49a2c5b364101fb79 299 SUPERFAMILY SSF53850 96 291 7.06E-23 T 23-10-2018 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 SUPERFAMILY SSF47757 5 75 3.53E-17 T 23-10-2018 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 2.1E-37 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 2.1E-37 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 PRINTS PR00996 Glutamate methyltransferase family signature 233 256 2.1E-37 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 PRINTS PR00996 Glutamate methyltransferase family signature 109 129 2.1E-37 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 2.1E-37 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 PRINTS PR00996 Glutamate methyltransferase family signature 214 228 2.1E-37 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 267 6.7E-59 T 23-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 Gene3D G3DSA:3.40.50.150 75 276 1.4E-58 T 23-10-2018 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 SUPERFAMILY SSF53335 76 267 5.62E-43 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 58 5.5E-12 T 23-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 PIRSF PIRSF000410 1 277 7.2E-80 T 23-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 SMART SM00138 8 274 3.6E-82 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_1236 dc6c322f1e45452a5755b9c8f654e876 280 Gene3D G3DSA:1.10.155.10 1 74 8.4E-18 T 23-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DLM_4325 f2c4a60d7ce1834a38a7ec237b145483 141 Pfam PF04186 FxsA cytoplasmic membrane protein 6 108 5.4E-19 T 23-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 DLM_3459 130dd694035defed237021563b5d8f89 233 Pfam PF13649 Methyltransferase domain 76 164 1.4E-6 T 23-10-2018 DLM_3459 130dd694035defed237021563b5d8f89 233 SUPERFAMILY SSF53335 53 197 2.31E-18 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3459 130dd694035defed237021563b5d8f89 233 Gene3D G3DSA:3.40.50.150 42 229 4.8E-17 T 23-10-2018 DLM_1566 ba4210f1509c3558fa07a724fec1b7d9 149 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 2 147 17.55 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DLM_1566 ba4210f1509c3558fa07a724fec1b7d9 149 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 43 127 5.0E-10 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DLM_1566 ba4210f1509c3558fa07a724fec1b7d9 149 Pfam PF04284 Protein of unknown function (DUF441) 8 144 6.7E-43 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DLM_4145 c49e7bbc6abcbfb4f2254184ba4d1338 611 SUPERFAMILY SSF143975 3 421 4.71E-149 T 23-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_4145 c49e7bbc6abcbfb4f2254184ba4d1338 611 SUPERFAMILY SSF52016 422 605 1.26E-60 T 23-10-2018 DLM_4145 c49e7bbc6abcbfb4f2254184ba4d1338 611 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 157 167 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_4145 c49e7bbc6abcbfb4f2254184ba4d1338 611 Pfam PF00920 Dehydratase family 68 601 3.7E-168 T 23-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_4145 c49e7bbc6abcbfb4f2254184ba4d1338 611 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 604 0.0 T 23-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 DLM_4145 c49e7bbc6abcbfb4f2254184ba4d1338 611 Gene3D G3DSA:3.50.30.80 422 572 3.2E-53 T 23-10-2018 DLM_4145 c49e7bbc6abcbfb4f2254184ba4d1338 611 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 3 605 59.376 T 23-10-2018 DLM_4145 c49e7bbc6abcbfb4f2254184ba4d1338 611 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 508 519 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DLM_2618 22c9b7ae67950f7f92b9338042fa8705 306 Gene3D G3DSA:1.10.10.10 7 94 3.4E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2618 22c9b7ae67950f7f92b9338042fa8705 306 SUPERFAMILY SSF53850 92 296 2.53E-24 T 23-10-2018 DLM_2618 22c9b7ae67950f7f92b9338042fa8705 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.1E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2618 22c9b7ae67950f7f92b9338042fa8705 306 Pfam PF03466 LysR substrate binding domain 92 290 2.0E-21 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2618 22c9b7ae67950f7f92b9338042fa8705 306 SUPERFAMILY SSF46785 7 115 1.3E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2618 22c9b7ae67950f7f92b9338042fa8705 306 Gene3D G3DSA:3.40.190.290 97 274 2.2E-14 T 23-10-2018 DLM_0927 2a518818997f77db6706d79dc5096d1f 259 SUPERFAMILY SSF51735 11 257 4.33E-66 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0927 2a518818997f77db6706d79dc5096d1f 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 185 0.0015 T 23-10-2018 DLM_0927 2a518818997f77db6706d79dc5096d1f 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_0927 2a518818997f77db6706d79dc5096d1f 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 256 1.3E-51 T 23-10-2018 DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.9E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 9.9E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 9.9E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.0E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.0E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.0E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.0E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.0E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 6.0E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0927 2a518818997f77db6706d79dc5096d1f 259 Gene3D G3DSA:3.40.50.720 4 258 1.7E-68 T 23-10-2018 DLM_3819 e8fdcec456cf0a4b2c617e72b56aa29f 351 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 38 2.3E-5 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3819 e8fdcec456cf0a4b2c617e72b56aa29f 351 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 2.5E-4 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3819 e8fdcec456cf0a4b2c617e72b56aa29f 351 Pfam PF16074 Type IV Pilus-assembly protein W 190 348 4.5E-12 T 23-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 DLM_3249 d4be1479f8f18a98fe9201ad9921fd72 349 Gene3D G3DSA:3.40.50.300 34 303 2.9E-78 T 23-10-2018 DLM_3249 d4be1479f8f18a98fe9201ad9921fd72 349 SMART SM00382 54 243 1.7E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3249 d4be1479f8f18a98fe9201ad9921fd72 349 SUPERFAMILY SSF52540 35 271 9.31E-77 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3249 d4be1479f8f18a98fe9201ad9921fd72 349 Pfam PF00005 ABC transporter 46 193 7.0E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3249 d4be1479f8f18a98fe9201ad9921fd72 349 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_3249 d4be1479f8f18a98fe9201ad9921fd72 349 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 282 1.3E-111 T 23-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 DLM_2052 35f9908e16d6e33aa4308d5ab0b38103 361 Pfam PF04303 PrpF protein 13 357 2.4E-99 T 23-10-2018 IPR007400 PrpF protein DLM_2052 35f9908e16d6e33aa4308d5ab0b38103 361 Gene3D G3DSA:3.10.310.10 13 355 7.6E-108 T 23-10-2018 DLM_2052 35f9908e16d6e33aa4308d5ab0b38103 361 Gene3D G3DSA:3.10.310.10 175 342 7.6E-108 T 23-10-2018 DLM_2052 35f9908e16d6e33aa4308d5ab0b38103 361 SUPERFAMILY SSF54506 11 176 2.35E-57 T 23-10-2018 DLM_2052 35f9908e16d6e33aa4308d5ab0b38103 361 SUPERFAMILY SSF54506 180 359 8.89E-50 T 23-10-2018 DLM_3222 9271845c7d16fc112f6ff6a8038470ab 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.5E-36 T 23-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DLM_3222 9271845c7d16fc112f6ff6a8038470ab 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.2E-26 T 23-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DLM_3222 9271845c7d16fc112f6ff6a8038470ab 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 23-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DLM_3222 9271845c7d16fc112f6ff6a8038470ab 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 6.0E-56 T 23-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 DLM_3222 9271845c7d16fc112f6ff6a8038470ab 107 Gene3D G3DSA:2.60.300.12 2 107 3.0E-37 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DLM_3222 9271845c7d16fc112f6ff6a8038470ab 107 SUPERFAMILY SSF89360 1 96 1.57E-31 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DLM_3002 a970d204c9887ad82b1407f565b2a2fe 129 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 9.1E-67 T 23-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DLM_3002 a970d204c9887ad82b1407f565b2a2fe 129 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 23-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DLM_3002 a970d204c9887ad82b1407f565b2a2fe 129 SUPERFAMILY SSF54593 1 127 2.01E-38 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_3002 a970d204c9887ad82b1407f565b2a2fe 129 Gene3D G3DSA:3.10.180.10 1 128 3.0E-51 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_3002 a970d204c9887ad82b1407f565b2a2fe 129 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 23-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DLM_3002 a970d204c9887ad82b1407f565b2a2fe 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 4.5E-24 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_1709 ee8fccd7c2047f25b5cf1c21d216505b 313 Pfam PF03547 Membrane transport protein 161 301 1.0E-14 T 23-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DLM_1709 ee8fccd7c2047f25b5cf1c21d216505b 313 Pfam PF03547 Membrane transport protein 5 147 6.8E-15 T 23-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DLM_3460 9aae9d226a56e3197ff1cf23f3e9e20b 257 SUPERFAMILY SSF56219 1 255 4.84E-79 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DLM_3460 9aae9d226a56e3197ff1cf23f3e9e20b 257 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 255 9.5E-76 T 23-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DLM_3460 9aae9d226a56e3197ff1cf23f3e9e20b 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 1.2E-20 T 23-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DLM_3460 9aae9d226a56e3197ff1cf23f3e9e20b 257 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 255 3.9E-78 T 23-10-2018 DLM_3460 9aae9d226a56e3197ff1cf23f3e9e20b 257 Gene3D G3DSA:3.60.10.10 1 256 1.2E-71 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DLM_0252 72cc69c8a567cd43303638c4930dc1e0 318 SUPERFAMILY SSF75138 9 134 2.35E-31 T 23-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DLM_0252 72cc69c8a567cd43303638c4930dc1e0 318 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 311 37.369 T 23-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DLM_0252 72cc69c8a567cd43303638c4930dc1e0 318 SUPERFAMILY SSF53795 138 304 2.69E-36 T 23-10-2018 DLM_0252 72cc69c8a567cd43303638c4930dc1e0 318 Pfam PF02603 HPr Serine kinase N terminus 4 130 1.5E-26 T 23-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DLM_0252 72cc69c8a567cd43303638c4930dc1e0 318 Pfam PF07475 HPr Serine kinase C-terminal domain 133 303 1.3E-65 T 23-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DLM_0252 72cc69c8a567cd43303638c4930dc1e0 318 Gene3D G3DSA:3.40.50.300 133 317 2.1E-65 T 23-10-2018 DLM_0252 72cc69c8a567cd43303638c4930dc1e0 318 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 4 305 6.6E-102 T 23-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DLM_0252 72cc69c8a567cd43303638c4930dc1e0 318 Gene3D G3DSA:3.40.1390.20 5 132 4.9E-29 T 23-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DLM_1684 8dd7898a9285b4e5e386bb5cf44e627b 468 Pfam PF00583 Acetyltransferase (GNAT) family 150 204 1.3E-6 T 23-10-2018 IPR000182 GNAT domain DLM_1684 8dd7898a9285b4e5e386bb5cf44e627b 468 Gene3D G3DSA:3.40.630.30 84 251 5.7E-18 T 23-10-2018 DLM_1684 8dd7898a9285b4e5e386bb5cf44e627b 468 Pfam PF12697 Alpha/beta hydrolase family 268 377 1.8E-11 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_1684 8dd7898a9285b4e5e386bb5cf44e627b 468 SUPERFAMILY SSF55729 87 219 1.41E-13 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_1684 8dd7898a9285b4e5e386bb5cf44e627b 468 Gene3D G3DSA:3.40.50.1820 252 465 4.2E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1684 8dd7898a9285b4e5e386bb5cf44e627b 468 SUPERFAMILY SSF53474 247 465 7.63E-30 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3286 94e5262f307fb8181438f1014c3978d8 405 SMART SM00849 41 226 2.0E-19 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3286 94e5262f307fb8181438f1014c3978d8 405 SUPERFAMILY SSF56281 30 254 5.32E-40 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3286 94e5262f307fb8181438f1014c3978d8 405 Gene3D G3DSA:3.60.15.10 29 265 1.3E-31 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3286 94e5262f307fb8181438f1014c3978d8 405 Pfam PF00753 Metallo-beta-lactamase superfamily 43 226 2.6E-12 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3287 b1f8b2fbf0ed1a16389c35d1d86410ac 135 Pfam PF12802 MarR family 20 80 1.3E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3287 b1f8b2fbf0ed1a16389c35d1d86410ac 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 126 1.5E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3287 b1f8b2fbf0ed1a16389c35d1d86410ac 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 40 56 1.5E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3287 b1f8b2fbf0ed1a16389c35d1d86410ac 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 72 1.5E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3287 b1f8b2fbf0ed1a16389c35d1d86410ac 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 92 1.5E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3287 b1f8b2fbf0ed1a16389c35d1d86410ac 135 SUPERFAMILY SSF46785 3 132 1.98E-30 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3287 b1f8b2fbf0ed1a16389c35d1d86410ac 135 SMART SM00347 15 116 1.3E-17 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3287 b1f8b2fbf0ed1a16389c35d1d86410ac 135 Gene3D G3DSA:1.10.10.10 1 135 1.0E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0966 d5f49e8698be8283c053a048abb9a395 238 Gene3D G3DSA:3.40.50.180 39 236 8.6E-75 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_0966 d5f49e8698be8283c053a048abb9a395 238 SUPERFAMILY SSF52738 45 233 7.32E-71 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_0966 d5f49e8698be8283c053a048abb9a395 238 Pfam PF01339 CheB methylesterase 48 227 2.9E-63 T 23-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_3856 b05451b1f6469440b083a71a1c90ebae 292 SUPERFAMILY SSF109604 12 184 5.76E-39 T 23-10-2018 DLM_3856 b05451b1f6469440b083a71a1c90ebae 292 Pfam PF01966 HD domain 27 147 1.6E-17 T 23-10-2018 IPR006674 HD domain DLM_3856 b05451b1f6469440b083a71a1c90ebae 292 Gene3D G3DSA:1.10.3210.10 3 191 9.7E-63 T 23-10-2018 DLM_3856 b05451b1f6469440b083a71a1c90ebae 292 SMART SM00471 21 156 2.8E-9 T 23-10-2018 IPR003607 HD/PDEase domain DLM_1069 ebcf8606b39b6e3fe2434feb4f2200cd 193 SMART SM00852 5 151 4.9E-26 T 23-10-2018 IPR001453 MoaB/Mog domain DLM_1069 ebcf8606b39b6e3fe2434feb4f2200cd 193 Gene3D G3DSA:3.40.980.10 1 193 1.1E-64 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily DLM_1069 ebcf8606b39b6e3fe2434feb4f2200cd 193 SUPERFAMILY SSF53218 2 186 6.67E-50 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily DLM_1069 ebcf8606b39b6e3fe2434feb4f2200cd 193 Pfam PF00994 Probable molybdopterin binding domain 6 145 1.8E-30 T 23-10-2018 IPR001453 MoaB/Mog domain DLM_1069 ebcf8606b39b6e3fe2434feb4f2200cd 193 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 145 6.4E-42 T 23-10-2018 IPR001453 MoaB/Mog domain DLM_1069 ebcf8606b39b6e3fe2434feb4f2200cd 193 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 67 80 - T 23-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DLM_1223 945a2eb5e2e4662f564542435fb203d3 481 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 474 4.3E-87 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_1223 945a2eb5e2e4662f564542435fb203d3 481 SUPERFAMILY SSF56954 4 476 3.14E-96 T 23-10-2018 DLM_1223 945a2eb5e2e4662f564542435fb203d3 481 Pfam PF02321 Outer membrane efflux protein 65 260 1.4E-22 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1223 945a2eb5e2e4662f564542435fb203d3 481 Pfam PF02321 Outer membrane efflux protein 292 464 1.8E-23 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1223 945a2eb5e2e4662f564542435fb203d3 481 Gene3D G3DSA:1.20.1600.10 56 475 1.8E-111 T 23-10-2018 DLM_1223 945a2eb5e2e4662f564542435fb203d3 481 Gene3D G3DSA:2.20.200.10 102 363 1.8E-111 T 23-10-2018 DLM_0739 45ba079e993b8d1f1eba8bd8078fbb46 478 Pfam PF00171 Aldehyde dehydrogenase family 18 473 7.4E-162 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0739 45ba079e993b8d1f1eba8bd8078fbb46 478 Gene3D G3DSA:3.40.309.10 253 443 8.1E-175 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0739 45ba079e993b8d1f1eba8bd8078fbb46 478 SUPERFAMILY SSF53720 5 476 3.27E-157 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0739 45ba079e993b8d1f1eba8bd8078fbb46 478 Gene3D G3DSA:3.40.605.10 25 468 8.1E-175 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0739 45ba079e993b8d1f1eba8bd8078fbb46 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_3679 7096cc3ce08ed95f499ebca2f294e3cc 372 SUPERFAMILY SSF53822 71 371 1.92E-54 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_3679 7096cc3ce08ed95f499ebca2f294e3cc 372 Gene3D G3DSA:3.40.50.2300 73 356 1.0E-91 T 23-10-2018 DLM_3679 7096cc3ce08ed95f499ebca2f294e3cc 372 Pfam PF04348 LppC putative lipoprotein 71 363 1.9E-52 T 23-10-2018 IPR007443 Penicillin-binding protein activator LpoA DLM_3679 7096cc3ce08ed95f499ebca2f294e3cc 372 Gene3D G3DSA:3.40.50.2300 175 294 1.0E-91 T 23-10-2018 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 Gene3D G3DSA:1.10.300.10 102 201 2.6E-100 T 23-10-2018 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 SUPERFAMILY SSF52540 3 429 5.2E-176 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0579 72827dc0a41b19c692db27842e4539bf 431 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 3.2E-177 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 Gene3D G3DSA:3.40.440.10 6 249 2.6E-100 T 23-10-2018 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 Pfam PF00709 Adenylosuccinate synthetase 5 423 5.8E-177 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 SMART SM00788 4 424 6.9E-299 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 Gene3D G3DSA:3.90.170.10 267 430 3.8E-68 T 23-10-2018 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 23-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DLM_0579 72827dc0a41b19c692db27842e4539bf 431 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 431 211.065 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 SUPERFAMILY SSF52374 6 327 6.19E-101 T 23-10-2018 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 Gene3D G3DSA:1.10.240.10 227 329 7.0E-35 T 23-10-2018 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 Gene3D G3DSA:3.10.290.10 330 425 3.4E-28 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 Pfam PF00579 tRNA synthetases class I (W and Y) 31 327 1.1E-80 T 23-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 SUPERFAMILY SSF55174 326 423 1.57E-20 T 23-10-2018 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 Pfam PF01479 S4 domain 363 403 6.5E-7 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 45.241 T 23-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 Gene3D G3DSA:3.40.50.620 1 226 4.6E-89 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 SMART SM00363 358 419 8.3E-7 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 5.2E-31 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 5.2E-31 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 5.2E-31 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 5.2E-31 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DLM_1174 9b6042ed3ceaa42479a1e23c66650deb 425 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 423 6.5E-124 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DLM_2226 e2e62388f90d56e8645880f2cb5e0372 200 Gene3D G3DSA:3.40.50.300 8 200 1.5E-66 T 23-10-2018 DLM_2226 e2e62388f90d56e8645880f2cb5e0372 200 PIRSF PIRSF015617 3 200 7.0E-73 T 23-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DLM_2226 e2e62388f90d56e8645880f2cb5e0372 200 SUPERFAMILY SSF52540 10 200 2.52E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2226 e2e62388f90d56e8645880f2cb5e0372 200 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 29 200 5.9E-61 T 23-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DLM_2226 e2e62388f90d56e8645880f2cb5e0372 200 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 27 200 4.9E-69 T 23-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DLM_1798 e242fcf87faebae58e6aef9d0da1add1 366 Gene3D G3DSA:3.30.420.40 143 326 1.4E-125 T 23-10-2018 DLM_1798 e242fcf87faebae58e6aef9d0da1add1 366 Gene3D G3DSA:3.30.420.40 10 361 1.4E-125 T 23-10-2018 DLM_1798 e242fcf87faebae58e6aef9d0da1add1 366 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 366 40.733 T 23-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 DLM_1798 e242fcf87faebae58e6aef9d0da1add1 366 SUPERFAMILY SSF53067 4 338 4.75E-21 T 23-10-2018 DLM_1798 e242fcf87faebae58e6aef9d0da1add1 366 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 366 1.7E-145 T 23-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 DLM_2458 68a6c2dda18354270f7d6e4a68dc37d9 285 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 25 261 1.2E-66 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2458 68a6c2dda18354270f7d6e4a68dc37d9 285 PIRSF PIRSF001430 23 282 1.8E-76 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2458 68a6c2dda18354270f7d6e4a68dc37d9 285 Gene3D G3DSA:3.30.70.580 22 127 7.8E-39 T 23-10-2018 DLM_2458 68a6c2dda18354270f7d6e4a68dc37d9 285 SUPERFAMILY SSF55120 24 273 1.29E-87 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2458 68a6c2dda18354270f7d6e4a68dc37d9 285 Gene3D G3DSA:3.30.70.660 128 265 1.1E-45 T 23-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 DLM_2458 68a6c2dda18354270f7d6e4a68dc37d9 285 Pfam PF01416 tRNA pseudouridine synthase 31 125 7.7E-10 T 23-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2458 68a6c2dda18354270f7d6e4a68dc37d9 285 Pfam PF01416 tRNA pseudouridine synthase 165 267 2.5E-26 T 23-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2458 68a6c2dda18354270f7d6e4a68dc37d9 285 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 24 266 35.106 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2585 ba34bf3a04683e96255f9f471a5c4b20 459 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 5.3E-15 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2585 ba34bf3a04683e96255f9f471a5c4b20 459 Gene3D G3DSA:3.40.640.10 128 348 4.2E-85 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2585 ba34bf3a04683e96255f9f471a5c4b20 459 SUPERFAMILY SSF53383 107 457 4.89E-72 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2585 ba34bf3a04683e96255f9f471a5c4b20 459 SMART SM00345 7 66 8.1E-17 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2585 ba34bf3a04683e96255f9f471a5c4b20 459 SUPERFAMILY SSF46785 2 79 3.56E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2585 ba34bf3a04683e96255f9f471a5c4b20 459 Gene3D G3DSA:1.10.10.10 1 67 5.6E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2585 ba34bf3a04683e96255f9f471a5c4b20 459 Gene3D G3DSA:3.90.1150.10 102 453 4.2E-85 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2585 ba34bf3a04683e96255f9f471a5c4b20 459 Pfam PF00155 Aminotransferase class I and II 121 435 1.3E-27 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_4294 0cd9c5bd07b66829809b5f9c8ad961ea 161 SUPERFAMILY SSF103473 28 140 1.7E-11 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_4294 0cd9c5bd07b66829809b5f9c8ad961ea 161 Gene3D G3DSA:1.20.1720.10 43 144 3.7E-15 T 23-10-2018 DLM_4294 0cd9c5bd07b66829809b5f9c8ad961ea 161 Pfam PF07690 Major Facilitator Superfamily 19 139 1.2E-8 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_3700 43ed8121f252a19e2e00dea91279c0d3 247 Pfam PF00902 Sec-independent protein translocase protein (TatC) 9 218 6.8E-66 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DLM_3700 43ed8121f252a19e2e00dea91279c0d3 247 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 235 16.959 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DLM_3700 43ed8121f252a19e2e00dea91279c0d3 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 151 179 3.4E-48 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DLM_3700 43ed8121f252a19e2e00dea91279c0d3 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 82 100 3.4E-48 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DLM_3700 43ed8121f252a19e2e00dea91279c0d3 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 100 126 3.4E-48 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DLM_3700 43ed8121f252a19e2e00dea91279c0d3 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 5 32 3.4E-48 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DLM_3700 43ed8121f252a19e2e00dea91279c0d3 247 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 6 223 6.3E-70 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DLM_1997 05c16ff9f9794c0253354226e0ab05d0 294 Pfam PF04228 Putative neutral zinc metallopeptidase 1 289 7.5E-123 T 23-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative DLM_3627 0d86801db7c25c90e97dc66addbb9d3a 196 SMART SM00448 3 113 2.0E-20 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3627 0d86801db7c25c90e97dc66addbb9d3a 196 SUPERFAMILY SSF52172 3 135 3.84E-25 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3627 0d86801db7c25c90e97dc66addbb9d3a 196 Gene3D G3DSA:1.10.10.10 126 192 2.9E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3627 0d86801db7c25c90e97dc66addbb9d3a 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 132 187 7.6E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3627 0d86801db7c25c90e97dc66addbb9d3a 196 SMART SM00421 130 189 3.1E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3627 0d86801db7c25c90e97dc66addbb9d3a 196 Pfam PF00072 Response regulator receiver domain 6 112 1.7E-19 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3627 0d86801db7c25c90e97dc66addbb9d3a 196 SUPERFAMILY SSF46894 118 195 2.31E-15 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_3627 0d86801db7c25c90e97dc66addbb9d3a 196 Gene3D G3DSA:3.40.50.2300 2 125 6.0E-31 T 23-10-2018 DLM_3177 3fdc5e83f882a70fe7d2a4134420b811 230 Gene3D G3DSA:3.40.50.300 7 228 3.0E-63 T 23-10-2018 DLM_3177 3fdc5e83f882a70fe7d2a4134420b811 230 Pfam PF00005 ABC transporter 29 175 1.4E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3177 3fdc5e83f882a70fe7d2a4134420b811 230 SUPERFAMILY SSF52540 10 225 2.54E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3177 3fdc5e83f882a70fe7d2a4134420b811 230 SMART SM00382 38 222 9.5E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3177 3fdc5e83f882a70fe7d2a4134420b811 230 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0716 08e806be1397cafcb305abbca78d43a6 642 Pfam PF08298 PrkA AAA domain 22 378 3.4E-172 T 23-10-2018 IPR013153 PrkA AAA domain DLM_0716 08e806be1397cafcb305abbca78d43a6 642 SMART SM00763 21 378 6.4E-212 T 23-10-2018 IPR013153 PrkA AAA domain DLM_0716 08e806be1397cafcb305abbca78d43a6 642 PIRSF PIRSF000549 1 642 2.5E-295 T 23-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 DLM_0716 08e806be1397cafcb305abbca78d43a6 642 Gene3D G3DSA:3.40.50.300 73 327 5.8E-8 T 23-10-2018 DLM_0716 08e806be1397cafcb305abbca78d43a6 642 SUPERFAMILY SSF52540 77 346 8.18E-18 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0716 08e806be1397cafcb305abbca78d43a6 642 Pfam PF06798 PrkA serine protein kinase C-terminal domain 381 634 8.2E-72 T 23-10-2018 IPR010650 PrkA C-terminal domain DLM_4155 67057c793f2135184f416d916765d7b1 108 Pfam PF01541 GIY-YIG catalytic domain 13 82 5.5E-11 T 23-10-2018 IPR000305 GIY-YIG endonuclease DLM_4155 67057c793f2135184f416d916765d7b1 108 SUPERFAMILY SSF82771 12 80 2.48E-11 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DLM_4155 67057c793f2135184f416d916765d7b1 108 Gene3D G3DSA:3.40.1440.10 7 98 3.6E-27 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DLM_1975 972670a144f3093f9428558d374db5e0 288 SUPERFAMILY SSF54713 56 145 8.37E-26 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DLM_1975 972670a144f3093f9428558d374db5e0 288 Pfam PF00889 Elongation factor TS 71 269 1.7E-68 T 23-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 DLM_1975 972670a144f3093f9428558d374db5e0 288 Gene3D G3DSA:1.10.286.20 188 234 1.9E-40 T 23-10-2018 DLM_1975 972670a144f3093f9428558d374db5e0 288 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 23-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_1975 972670a144f3093f9428558d374db5e0 288 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 287 1.5E-92 T 23-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_1975 972670a144f3093f9428558d374db5e0 288 Gene3D G3DSA:3.30.479.20 57 147 1.4E-26 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DLM_1975 972670a144f3093f9428558d374db5e0 288 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 23-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_1975 972670a144f3093f9428558d374db5e0 288 Gene3D G3DSA:1.10.8.10 1 56 3.7E-20 T 23-10-2018 DLM_1975 972670a144f3093f9428558d374db5e0 288 Gene3D G3DSA:3.30.479.20 153 268 1.9E-40 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DLM_1975 972670a144f3093f9428558d374db5e0 288 SUPERFAMILY SSF54713 148 286 8.9E-48 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DLM_1975 972670a144f3093f9428558d374db5e0 288 SUPERFAMILY SSF46934 3 56 3.98E-13 T 23-10-2018 IPR009060 UBA-like superfamily GO:0005515 DLM_1975 972670a144f3093f9428558d374db5e0 288 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 77.676 T 23-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DLM_1037 b8b05691084a4de1172f56e776746e35 141 Pfam PF13279 Thioesterase-like superfamily 16 131 1.6E-18 T 23-10-2018 DLM_1037 b8b05691084a4de1172f56e776746e35 141 SUPERFAMILY SSF54637 11 133 2.68E-33 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_1037 b8b05691084a4de1172f56e776746e35 141 Gene3D G3DSA:3.10.129.10 7 134 1.7E-40 T 23-10-2018 DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 SUPERFAMILY SSF52540 324 552 5.87E-60 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 Gene3D G3DSA:3.40.50.300 2 253 8.6E-54 T 23-10-2018 DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 SUPERFAMILY SSF52540 5 230 2.26E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 Pfam PF00005 ABC transporter 22 168 2.1E-25 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 Gene3D G3DSA:3.40.50.300 323 564 6.4E-62 T 23-10-2018 DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 Pfam PF00005 ABC transporter 350 492 1.2E-24 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 SMART SM00382 357 547 1.6E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2010 2d3f317dfe54f5905a80ca938abb1875 643 SMART SM00382 30 217 1.1E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1433 061eb1c78c76872ed6c4e87e832690cc 398 SUPERFAMILY SSF54506 2 182 4.47E-71 T 23-10-2018 DLM_1433 061eb1c78c76872ed6c4e87e832690cc 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 398 1.2E-227 T 23-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 DLM_1433 061eb1c78c76872ed6c4e87e832690cc 398 Pfam PF04303 PrpF protein 6 394 4.3E-174 T 23-10-2018 IPR007400 PrpF protein DLM_1433 061eb1c78c76872ed6c4e87e832690cc 398 Gene3D G3DSA:3.10.310.10 1 186 4.7E-81 T 23-10-2018 DLM_1433 061eb1c78c76872ed6c4e87e832690cc 398 Gene3D G3DSA:3.10.310.10 187 377 2.6E-73 T 23-10-2018 DLM_1433 061eb1c78c76872ed6c4e87e832690cc 398 SUPERFAMILY SSF54506 192 396 2.41E-76 T 23-10-2018 DLM_4040 2eb6386f635b9b9af4064154ff65259b 156 SUPERFAMILY SSF55729 6 152 2.13E-35 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_4040 2eb6386f635b9b9af4064154ff65259b 156 Pfam PF13673 Acetyltransferase (GNAT) domain 51 152 4.1E-16 T 23-10-2018 IPR000182 GNAT domain DLM_4040 2eb6386f635b9b9af4064154ff65259b 156 Gene3D G3DSA:3.40.630.30 4 152 3.9E-36 T 23-10-2018 DLM_0651 0ed394b85f0da8ec56fba751ca0de758 159 SUPERFAMILY SSF55083 3 141 1.02E-52 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DLM_0651 0ed394b85f0da8ec56fba751ca0de758 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 133 2.7E-44 T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DLM_0651 0ed394b85f0da8ec56fba751ca0de758 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 133 5.1E-37 T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DLM_0651 0ed394b85f0da8ec56fba751ca0de758 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DLM_0651 0ed394b85f0da8ec56fba751ca0de758 159 Gene3D G3DSA:3.30.70.560 2 154 1.8E-53 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DLM_2006 739fd295dfee109bffb3cb79c5e9ab1d 215 Pfam PF13972 Bacterial transcriptional repressor 62 205 2.5E-41 T 23-10-2018 IPR025722 Bacterial transcriptional repressor TetR DLM_2006 739fd295dfee109bffb3cb79c5e9ab1d 215 Gene3D G3DSA:1.10.357.10 5 214 5.6E-65 T 23-10-2018 DLM_2006 739fd295dfee109bffb3cb79c5e9ab1d 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 8.9E-12 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2006 739fd295dfee109bffb3cb79c5e9ab1d 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.0E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2006 739fd295dfee109bffb3cb79c5e9ab1d 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.0E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2006 739fd295dfee109bffb3cb79c5e9ab1d 215 SUPERFAMILY SSF46689 4 79 2.0E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 Pfam PF01292 Prokaryotic cytochrome b561 24 229 3.4E-29 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 Gene3D G3DSA:1.20.950.20 14 219 2.4E-74 T 23-10-2018 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 22 234 1.0E-71 T 23-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 SUPERFAMILY SSF81342 18 233 1.49E-38 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 221 234 1.7E-49 T 23-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 26 49 1.7E-49 T 23-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 190 212 1.7E-49 T 23-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 142 161 1.7E-49 T 23-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 64 88 1.7E-49 T 23-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 DLM_2323 43a49c641b51bf46187e4b238801e39c 235 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 29 46 - T 23-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 SUPERFAMILY SSF48256 4 423 1.44E-166 T 23-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 11 417 4.2E-234 T 23-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 Pfam PF00285 Citrate synthase, C-terminal domain 45 406 1.3E-132 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 Gene3D G3DSA:2.20.28.60 1 46 2.2E-18 T 23-10-2018 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 ProSitePatterns PS00480 Citrate synthase signature. 297 309 - T 23-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 Gene3D G3DSA:1.10.580.10 53 406 7.3E-146 T 23-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 PRINTS PR00143 Citrate synthase signature 354 370 1.6E-54 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 PRINTS PR00143 Citrate synthase signature 374 388 1.6E-54 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 PRINTS PR00143 Citrate synthase signature 290 310 1.6E-54 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 PRINTS PR00143 Citrate synthase signature 237 265 1.6E-54 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 PRINTS PR00143 Citrate synthase signature 215 230 1.6E-54 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 PRINTS PR00143 Citrate synthase signature 161 174 1.6E-54 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 PIRSF PIRSF001369 33 423 1.4E-165 T 23-10-2018 IPR024176 Citrate synthase, bacterial-type DLM_0353 57120207ab3efbbbbb5a0d6421285d85 423 Gene3D G3DSA:1.10.230.10 264 371 7.3E-146 T 23-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DLM_4284 a8c6095599ea7d709dca3eb6b7d8b8dd 122 Pfam PF06961 Protein of unknown function (DUF1294) 39 93 2.1E-22 T 23-10-2018 IPR010718 Protein of unknown function DUF1294 DLM_0555 bd194793ac4233afecf827c24b0d3d46 302 SUPERFAMILY SSF51658 7 294 2.63E-60 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_0555 bd194793ac4233afecf827c24b0d3d46 302 Gene3D G3DSA:3.20.20.150 1 291 2.1E-75 T 23-10-2018 DLM_0555 bd194793ac4233afecf827c24b0d3d46 302 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 5 292 3.2E-122 T 23-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 DLM_0555 bd194793ac4233afecf827c24b0d3d46 302 Pfam PF01261 Xylose isomerase-like TIM barrel 33 247 1.6E-21 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 SUPERFAMILY SSF51905 257 655 3.88E-34 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 Gene3D G3DSA:3.40.50.150 5 240 2.7E-100 T 23-10-2018 DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 Pfam PF01266 FAD dependent oxidoreductase 258 626 6.0E-46 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 Gene3D G3DSA:3.50.50.60 256 653 1.1E-137 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 3 651 26.931 T 23-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 Gene3D G3DSA:3.30.9.10 340 562 1.1E-137 T 23-10-2018 DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 110 230 1.7E-42 T 23-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 257 655 5.6E-137 T 23-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 DLM_1038 9a2b789a48a0138e23e1d334a96f2dd8 658 SUPERFAMILY SSF54373 469 540 9.16E-8 T 23-10-2018 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 Pfam PF13180 PDZ domain 223 280 1.0E-7 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 Gene3D G3DSA:2.30.42.10 122 215 1.2E-12 T 23-10-2018 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 SUPERFAMILY SSF50156 83 176 9.33E-14 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 Pfam PF02163 Peptidase family M50 6 432 3.8E-77 T 23-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 SMART SM00228 207 274 1.4E-5 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 SMART SM00228 109 183 0.0038 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 SUPERFAMILY SSF50156 213 285 3.29E-16 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 446 5.4E-113 T 23-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DLM_1969 4d78f5aed0c93b2a7731869174a3edb3 448 Gene3D G3DSA:2.30.42.10 217 304 1.5E-20 T 23-10-2018 DLM_1599 a96470e425311c5e06d31b0c80dc1e6b 165 SUPERFAMILY SSF141452 2 163 1.27E-55 T 23-10-2018 IPR036624 Hcp1-like superfamily DLM_1599 a96470e425311c5e06d31b0c80dc1e6b 165 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 157 3.4E-41 T 23-10-2018 IPR008514 Type VI secretion system effector, Hcp DLM_1599 a96470e425311c5e06d31b0c80dc1e6b 165 Pfam PF05638 Type VI secretion system effector, Hcp 6 138 1.0E-48 T 23-10-2018 IPR008514 Type VI secretion system effector, Hcp DLM_1599 a96470e425311c5e06d31b0c80dc1e6b 165 Gene3D G3DSA:2.30.110.20 2 165 5.3E-65 T 23-10-2018 IPR036624 Hcp1-like superfamily DLM_4382 876705906d7b36cfda9a0c86b0170872 164 SUPERFAMILY SSF160369 4 159 8.24E-46 T 23-10-2018 DLM_4382 876705906d7b36cfda9a0c86b0170872 164 Pfam PF00466 Ribosomal protein L10 5 100 3.4E-22 T 23-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DLM_4382 876705906d7b36cfda9a0c86b0170872 164 Gene3D G3DSA:3.30.70.1730 4 133 1.5E-33 T 23-10-2018 DLM_4382 876705906d7b36cfda9a0c86b0170872 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 26.469 T 23-10-2018 IPR022973 Ribosomal protein L10 DLM_0449 ad143164b05c840cd998d216fe868593 224 SUPERFAMILY SSF161098 24 217 1.83E-39 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0449 ad143164b05c840cd998d216fe868593 224 Gene3D G3DSA:1.10.3720.10 23 223 7.4E-45 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0449 ad143164b05c840cd998d216fe868593 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 114 3.1E-17 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_0449 ad143164b05c840cd998d216fe868593 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 219 5.3E-18 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3245 261c9c772424d4912f9cb96b1edbf3e7 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 21 310 2.3E-142 T 23-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 DLM_3245 261c9c772424d4912f9cb96b1edbf3e7 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 282 1.8E-51 T 23-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DLM_3245 261c9c772424d4912f9cb96b1edbf3e7 312 Gene3D G3DSA:3.40.190.10 30 291 3.1E-85 T 23-10-2018 DLM_3245 261c9c772424d4912f9cb96b1edbf3e7 312 SUPERFAMILY SSF53850 26 298 4.7E-81 T 23-10-2018 DLM_3245 261c9c772424d4912f9cb96b1edbf3e7 312 Gene3D G3DSA:3.40.190.100 112 221 3.1E-85 T 23-10-2018 DLM_2962 dd91985be89fc5668de68b6dd955bc0b 263 Pfam PF00005 ABC transporter 25 165 4.8E-22 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2962 dd91985be89fc5668de68b6dd955bc0b 263 Gene3D G3DSA:3.40.50.300 5 251 9.8E-59 T 23-10-2018 DLM_2962 dd91985be89fc5668de68b6dd955bc0b 263 SUPERFAMILY SSF52540 6 229 1.23E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2962 dd91985be89fc5668de68b6dd955bc0b 263 SMART SM00382 29 213 7.3E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2962 dd91985be89fc5668de68b6dd955bc0b 263 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 365 37.504 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 Pfam PF02119 Flagellar P-ring protein 22 364 2.6E-136 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 122 140 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 162 180 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 105 122 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 188 206 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 57 72 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 37 52 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 22 37 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 83 102 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_2440 fb231fbcb55281890864924e8cc82ec5 365 PRINTS PR01010 Flagellar P-ring protein signature 252 264 1.5E-79 T 23-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DLM_1373 4bf2c4f56f31da6be87cf92cbcbbaf11 100 Gene3D G3DSA:3.30.280.10 1 100 4.7E-48 T 23-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1373 4bf2c4f56f31da6be87cf92cbcbbaf11 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.4E-52 T 23-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1373 4bf2c4f56f31da6be87cf92cbcbbaf11 100 SUPERFAMILY SSF54111 1 99 3.01E-46 T 23-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1373 4bf2c4f56f31da6be87cf92cbcbbaf11 100 Pfam PF00547 Urease, gamma subunit 1 99 3.4E-47 T 23-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1373 4bf2c4f56f31da6be87cf92cbcbbaf11 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-44 T 23-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1373 4bf2c4f56f31da6be87cf92cbcbbaf11 100 PIRSF PIRSF001223 1 100 2.0E-50 T 23-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1373 4bf2c4f56f31da6be87cf92cbcbbaf11 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.874 T 23-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DLM_1927 bdbb3c012f079b9aaf9834d4f98c780a 196 PIRSF PIRSF036382 1 196 8.5E-56 T 23-10-2018 IPR008327 Signal transduction response regulator, antiterminator DLM_1927 bdbb3c012f079b9aaf9834d4f98c780a 196 Pfam PF00072 Response regulator receiver domain 10 115 9.9E-10 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1927 bdbb3c012f079b9aaf9834d4f98c780a 196 Gene3D G3DSA:1.10.10.10 136 194 1.5E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1927 bdbb3c012f079b9aaf9834d4f98c780a 196 Pfam PF03861 ANTAR domain 137 189 4.7E-18 T 23-10-2018 IPR005561 ANTAR domain GO:0003723 DLM_1927 bdbb3c012f079b9aaf9834d4f98c780a 196 SMART SM01012 134 189 1.9E-20 T 23-10-2018 IPR005561 ANTAR domain GO:0003723 DLM_1927 bdbb3c012f079b9aaf9834d4f98c780a 196 SMART SM00448 7 118 0.0018 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1927 bdbb3c012f079b9aaf9834d4f98c780a 196 SUPERFAMILY SSF52172 6 189 1.04E-42 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1927 bdbb3c012f079b9aaf9834d4f98c780a 196 Gene3D G3DSA:3.40.50.2300 1 135 5.1E-13 T 23-10-2018 DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 Gene3D G3DSA:3.40.50.2300 1 127 1.1E-31 T 23-10-2018 DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 SUPERFAMILY SSF52172 2 103 8.11E-27 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 SMART SM00448 1 110 7.6E-21 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 Gene3D G3DSA:3.40.50.180 147 342 8.9E-74 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 Pfam PF01339 CheB methylesterase 157 334 1.7E-59 T 23-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 PIRSF PIRSF000876 1 343 9.0E-134 T 23-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 Pfam PF00072 Response regulator receiver domain 2 103 7.7E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 340 38.991 T 23-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_2886 fa8ca8d71466c8eaf4d781d085ad7fbb 348 SUPERFAMILY SSF52738 155 340 4.84E-70 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_2302 741b79936f8350abd3a08e0cf1f0849d 309 SUPERFAMILY SSF64182 5 306 1.46E-9 T 23-10-2018 IPR038763 DHH phosphoesterase superfamily DLM_2302 741b79936f8350abd3a08e0cf1f0849d 309 PIRSF PIRSF028235 1 309 1.2E-158 T 23-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 DLM_1670 83a34d2026ab2ecc83507395ffd6ae92 510 Pfam PF00875 DNA photolyase 1 125 8.2E-25 T 23-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 DLM_1670 83a34d2026ab2ecc83507395ffd6ae92 510 Gene3D G3DSA:1.25.40.80 172 276 1.4E-18 T 23-10-2018 DLM_1670 83a34d2026ab2ecc83507395ffd6ae92 510 Gene3D G3DSA:1.10.579.10 281 480 1.7E-52 T 23-10-2018 DLM_1670 83a34d2026ab2ecc83507395ffd6ae92 510 SUPERFAMILY SSF52425 1 173 6.8E-42 T 23-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 DLM_1670 83a34d2026ab2ecc83507395ffd6ae92 510 Gene3D G3DSA:3.40.50.620 1 124 2.4E-31 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1670 83a34d2026ab2ecc83507395ffd6ae92 510 Pfam PF03441 FAD binding domain of DNA photolyase 262 459 3.0E-47 T 23-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 DLM_1670 83a34d2026ab2ecc83507395ffd6ae92 510 SUPERFAMILY SSF48173 184 463 3.01E-72 T 23-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DLM_0806 3a3125a7a16bf99344d914e8b251e2bf 251 Gene3D G3DSA:1.10.600.10 1 229 1.3E-70 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily DLM_0806 3a3125a7a16bf99344d914e8b251e2bf 251 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 2 248 1.1E-95 T 23-10-2018 IPR017827 Hydroxysqualene synthase HpnC MetaCyc: PWY-7072 DLM_0806 3a3125a7a16bf99344d914e8b251e2bf 251 Pfam PF00494 Squalene/phytoene synthase 1 237 1.7E-54 T 23-10-2018 DLM_0806 3a3125a7a16bf99344d914e8b251e2bf 251 SUPERFAMILY SSF48576 1 250 4.32E-62 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily DLM_3384 7d0be128193eeb64851935ce40a288b0 439 SUPERFAMILY SSF51735 1 195 2.04E-58 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3384 7d0be128193eeb64851935ce40a288b0 439 SUPERFAMILY SSF48179 204 301 1.84E-33 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 PIRSF PIRSF500134 1 439 1.9E-191 T 23-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 PIRSF PIRSF000124 1 439 2.2E-149 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 4.8E-138 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 Gene3D G3DSA:3.40.50.720 1 202 8.6E-84 T 23-10-2018 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 Gene3D G3DSA:3.40.50.720 235 439 5.4E-81 T 23-10-2018 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 SUPERFAMILY SSF52413 305 434 3.14E-39 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 9.2E-66 T 23-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 1.8E-31 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 1.8E-37 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 Gene3D G3DSA:1.20.5.100 203 234 5.1E-19 T 23-10-2018 DLM_3384 7d0be128193eeb64851935ce40a288b0 439 SMART SM00984 320 424 1.6E-51 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DLM_1287 7636bf21e6fe679ff04c5ab94ef974bd 213 SUPERFAMILY SSF46785 18 82 1.52E-5 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1287 7636bf21e6fe679ff04c5ab94ef974bd 213 Gene3D G3DSA:1.10.10.10 21 82 1.0E-6 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1287 7636bf21e6fe679ff04c5ab94ef974bd 213 Pfam PF09339 IclR helix-turn-helix domain 27 66 6.4E-5 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DLM_2628 12e973c918dfc9912032daf0027d14f9 214 PRINTS PR00394 RHS protein signature 53 73 1.6E-8 T 23-10-2018 IPR001826 RHS protein DLM_2628 12e973c918dfc9912032daf0027d14f9 214 PRINTS PR00394 RHS protein signature 135 154 1.6E-8 T 23-10-2018 IPR001826 RHS protein DLM_2628 12e973c918dfc9912032daf0027d14f9 214 Pfam PF03527 RHS protein 59 94 4.5E-14 T 23-10-2018 IPR001826 RHS protein DLM_2628 12e973c918dfc9912032daf0027d14f9 214 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 86 167 1.5E-29 T 23-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DLM_2628 12e973c918dfc9912032daf0027d14f9 214 Gene3D G3DSA:2.180.10.10 41 167 1.4E-36 T 23-10-2018 DLM_1117 9661e38844033c76cb47bb01870df03b 455 SUPERFAMILY SSF53720 1 453 2.36E-130 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_1117 9661e38844033c76cb47bb01870df03b 455 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_1117 9661e38844033c76cb47bb01870df03b 455 Gene3D G3DSA:3.40.605.10 1 449 3.1E-139 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_1117 9661e38844033c76cb47bb01870df03b 455 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 252 263 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_1117 9661e38844033c76cb47bb01870df03b 455 Pfam PF00171 Aldehyde dehydrogenase family 1 450 1.5E-124 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_1117 9661e38844033c76cb47bb01870df03b 455 Gene3D G3DSA:3.40.309.10 228 420 3.1E-139 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0176 8052ccaed4a984592e5c62f3e43d6911 226 Pfam PF01144 Coenzyme A transferase 6 204 8.6E-38 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DLM_0176 8052ccaed4a984592e5c62f3e43d6911 226 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 212 3.0E-96 T 23-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 DLM_0176 8052ccaed4a984592e5c62f3e43d6911 226 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 DLM_0176 8052ccaed4a984592e5c62f3e43d6911 226 SMART SM00882 6 206 4.4E-80 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DLM_0176 8052ccaed4a984592e5c62f3e43d6911 226 Gene3D G3DSA:3.40.1080.10 2 218 2.3E-99 T 23-10-2018 DLM_0176 8052ccaed4a984592e5c62f3e43d6911 226 SUPERFAMILY SSF100950 3 218 5.68E-72 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_2019 cac86f732dd2996c886e323c8c75c0e7 1078 SUPERFAMILY SSF46785 1012 1077 1.72E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2019 cac86f732dd2996c886e323c8c75c0e7 1078 Gene3D G3DSA:3.30.980.40 588 692 8.5E-29 T 23-10-2018 DLM_2019 cac86f732dd2996c886e323c8c75c0e7 1078 Pfam PF09397 Ftsk gamma domain 1013 1073 2.8E-27 T 23-10-2018 IPR018541 FtsK gamma domain DLM_2019 cac86f732dd2996c886e323c8c75c0e7 1078 Gene3D G3DSA:3.40.50.300 693 991 1.9E-119 T 23-10-2018 DLM_2019 cac86f732dd2996c886e323c8c75c0e7 1078 SMART SM00843 1011 1076 4.1E-38 T 23-10-2018 IPR018541 FtsK gamma domain DLM_2019 cac86f732dd2996c886e323c8c75c0e7 1078 Pfam PF01580 FtsK/SpoIIIE family 696 905 1.7E-71 T 23-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DLM_2019 cac86f732dd2996c886e323c8c75c0e7 1078 SUPERFAMILY SSF52540 671 977 3.72E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2019 cac86f732dd2996c886e323c8c75c0e7 1078 Gene3D G3DSA:1.10.10.10 1015 1077 1.6E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2385 c4a9d42f2f85c87cf73539aa7afed0a0 432 SUPERFAMILY SSF103473 14 420 1.44E-63 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2385 c4a9d42f2f85c87cf73539aa7afed0a0 432 Pfam PF07690 Major Facilitator Superfamily 19 374 2.1E-26 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2385 c4a9d42f2f85c87cf73539aa7afed0a0 432 Gene3D G3DSA:1.20.1250.20 11 423 4.1E-62 T 23-10-2018 DLM_2385 c4a9d42f2f85c87cf73539aa7afed0a0 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_4512 75d89640ce3daa8a8a12d67593371b8e 484 SUPERFAMILY SSF53383 126 481 3.98E-85 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4512 75d89640ce3daa8a8a12d67593371b8e 484 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 1.1E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_4512 75d89640ce3daa8a8a12d67593371b8e 484 SUPERFAMILY SSF46785 16 88 2.04E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4512 75d89640ce3daa8a8a12d67593371b8e 484 SMART SM00345 26 85 6.7E-12 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_4512 75d89640ce3daa8a8a12d67593371b8e 484 Pfam PF00155 Aminotransferase class I and II 150 446 1.3E-27 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_4512 75d89640ce3daa8a8a12d67593371b8e 484 Gene3D G3DSA:1.10.10.10 10 90 4.6E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4512 75d89640ce3daa8a8a12d67593371b8e 484 Gene3D G3DSA:3.40.640.10 113 475 7.8E-118 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0298 f943993c374b31fa7b6e2df8b2f16976 276 Pfam PF02616 Segregation and condensation protein ScpA 62 273 3.0E-27 T 23-10-2018 IPR003768 Segregation and condensation protein A DLM_0298 f943993c374b31fa7b6e2df8b2f16976 276 Hamap MF_01805 Segregation and condensation protein A [scpA]. 45 275 21.41 T 23-10-2018 IPR003768 Segregation and condensation protein A DLM_3505 9ebd7afed03ca303ecc8402291ef6d36 400 Gene3D G3DSA:1.10.150.130 91 207 5.1E-31 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal DLM_3505 9ebd7afed03ca303ecc8402291ef6d36 400 Gene3D G3DSA:3.30.160.390 1 90 4.0E-32 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DLM_3505 9ebd7afed03ca303ecc8402291ef6d36 400 Gene3D G3DSA:1.10.443.10 208 389 2.9E-20 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DLM_3505 9ebd7afed03ca303ecc8402291ef6d36 400 Pfam PF00589 Phage integrase family 209 378 1.3E-21 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DLM_3505 9ebd7afed03ca303ecc8402291ef6d36 400 SUPERFAMILY SSF56349 101 388 1.88E-59 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DLM_3505 9ebd7afed03ca303ecc8402291ef6d36 400 Pfam PF13356 Arm DNA-binding domain 3 88 6.1E-18 T 23-10-2018 IPR025166 Integrase, DNA-binding domain DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 Gene3D G3DSA:2.60.40.3500 16 125 2.6E-9 T 23-10-2018 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 Pfam PF07660 Secretin and TonB N terminus short domain 306 351 1.7E-8 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 Gene3D G3DSA:2.60.40.3470 133 258 2.3E-32 T 23-10-2018 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 Gene3D G3DSA:3.30.1370.120 377 451 4.5E-8 T 23-10-2018 IPR038591 NolW-like superfamily DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 Pfam PF03958 Bacterial type II/III secretion system short domain 378 452 3.4E-12 T 23-10-2018 IPR005644 NolW-like DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 PRINTS PR01032 Gene IV protein signature 679 701 7.7E-8 T 23-10-2018 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 PRINTS PR01032 Gene IV protein signature 522 545 7.7E-8 T 23-10-2018 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 PRINTS PR01032 Gene IV protein signature 626 654 7.7E-8 T 23-10-2018 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 644 677 - T 23-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 Pfam PF11741 AMIN domain 37 122 2.1E-10 T 23-10-2018 IPR021731 AMIN domain DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 279 699 8.8E-156 T 23-10-2018 IPR013355 Type IV pilus secretin PilQ DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 Gene3D G3DSA:3.55.50.30 259 376 4.5E-43 T 23-10-2018 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 Pfam PF00263 Bacterial type II and III secretion system protein 542 699 1.0E-50 T 23-10-2018 IPR004846 Type II/III secretion system GO:0009306 DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 PRINTS PR00811 Bacterial general secretion pathway protein D signature 686 700 1.5E-21 T 23-10-2018 IPR001775 GspD/PilQ family DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 PRINTS PR00811 Bacterial general secretion pathway protein D signature 538 562 1.5E-21 T 23-10-2018 IPR001775 GspD/PilQ family DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 PRINTS PR00811 Bacterial general secretion pathway protein D signature 663 681 1.5E-21 T 23-10-2018 IPR001775 GspD/PilQ family DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 462 1.5E-21 T 23-10-2018 IPR001775 GspD/PilQ family DLM_3533 ef25dc0200ca11a587499a1142e5ac60 706 SMART SM00965 304 352 1.8E-10 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DLM_1182 e1856b3a39058f7e74f33aa94cfe38b2 247 SMART SM00382 27 215 6.4E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1182 e1856b3a39058f7e74f33aa94cfe38b2 247 Pfam PF00005 ABC transporter 19 159 5.8E-23 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1182 e1856b3a39058f7e74f33aa94cfe38b2 247 Gene3D G3DSA:3.40.50.300 2 243 4.2E-53 T 23-10-2018 DLM_1182 e1856b3a39058f7e74f33aa94cfe38b2 247 SUPERFAMILY SSF52540 4 222 6.04E-49 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1182 e1856b3a39058f7e74f33aa94cfe38b2 247 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1125 822f747768896abbc492bbd21fdf6f81 251 Gene3D G3DSA:3.40.50.880 1 250 1.0E-63 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1125 822f747768896abbc492bbd21fdf6f81 251 SUPERFAMILY SSF52317 24 246 8.98E-40 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1125 822f747768896abbc492bbd21fdf6f81 251 Pfam PF07722 Peptidase C26 4 222 2.3E-69 T 23-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 DLM_1033 21968f48db1e754c8605dc1d2f193c0d 602 Pfam PF03814 Potassium-transporting ATPase A subunit 11 596 1.7E-244 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 DLM_1033 21968f48db1e754c8605dc1d2f193c0d 602 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 243 598 6.4E-164 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 DLM_1033 21968f48db1e754c8605dc1d2f193c0d 602 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 598 36.314 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 DLM_1033 21968f48db1e754c8605dc1d2f193c0d 602 PIRSF PIRSF001294 1 600 3.3E-244 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 3.3E-80 T 23-10-2018 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 557 1.2E-121 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 Gene3D G3DSA:2.30.110.50 33 363 1.5E-80 T 23-10-2018 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 Gene3D G3DSA:2.40.50.230 408 515 2.3E-43 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 SUPERFAMILY SSF69279 23 209 4.82E-45 T 23-10-2018 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 697 849 1.3E-53 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 SUPERFAMILY SSF69255 415 510 2.43E-31 T 23-10-2018 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 SUPERFAMILY SSF69349 500 558 7.06E-7 T 23-10-2018 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 Gene3D G3DSA:3.30.1920.30 246 315 1.5E-80 T 23-10-2018 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 SUPERFAMILY SSF69279 223 397 2.38E-14 T 23-10-2018 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 Gene3D G3DSA:3.55.50.10 112 213 1.5E-80 T 23-10-2018 DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 538 645 1.7E-37 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 565 4.4E-97 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_3647 b4cd7d3636dd5582d28d14c571790c4e 881 SUPERFAMILY SSF69349 699 849 2.35E-5 T 23-10-2018 DLM_4426 5cd451c1cd8da96ae72923e3d7048860 98 SUPERFAMILY SSF54909 1 82 2.04E-12 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_4426 5cd451c1cd8da96ae72923e3d7048860 98 Pfam PF03795 YCII-related domain 1 80 1.3E-7 T 23-10-2018 IPR005545 YCII-related DLM_0944 f3da19701d411ebeffed5c0e713eb808 460 Gene3D G3DSA:1.10.220.70 55 141 2.7E-33 T 23-10-2018 DLM_0944 f3da19701d411ebeffed5c0e713eb808 460 PIRSF PIRSF018788 1 459 1.1E-238 T 23-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DLM_0944 f3da19701d411ebeffed5c0e713eb808 460 Gene3D G3DSA:2.30.170.30 1 54 4.4E-24 T 23-10-2018 DLM_0944 f3da19701d411ebeffed5c0e713eb808 460 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 4.2E-220 T 23-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DLM_0944 f3da19701d411ebeffed5c0e713eb808 460 Gene3D G3DSA:3.20.20.70 142 453 2.9E-145 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 SUPERFAMILY SSF53597 153 361 3.73E-56 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 SUPERFAMILY SSF53927 8 152 9.7E-42 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 153 364 4.8E-57 T 23-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 Pfam PF01872 RibD C-terminal domain 155 340 2.8E-45 T 23-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 360 7.3E-107 T 23-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 Gene3D G3DSA:3.40.140.10 2 143 4.9E-40 T 23-10-2018 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 107 1.1E-18 T 23-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 Gene3D G3DSA:3.40.430.10 144 366 6.1E-70 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 96 - T 23-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DLM_0462 fdbab05c1ac9d1e50ebb5b9603a5ddd6 368 PIRSF PIRSF006769 4 367 7.6E-119 T 23-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DLM_4203 ccc45e4c144693b8a2b7dc0b38cca2a4 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.599 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DLM_4203 ccc45e4c144693b8a2b7dc0b38cca2a4 304 SUPERFAMILY SSF54211 3 125 9.86E-40 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_4203 ccc45e4c144693b8a2b7dc0b38cca2a4 304 Gene3D G3DSA:3.30.230.20 1 128 1.2E-47 T 23-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DLM_4203 ccc45e4c144693b8a2b7dc0b38cca2a4 304 Gene3D G3DSA:3.30.1700.10 129 304 2.6E-67 T 23-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DLM_4203 ccc45e4c144693b8a2b7dc0b38cca2a4 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 5.1E-107 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DLM_4203 ccc45e4c144693b8a2b7dc0b38cca2a4 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 297 2.8E-116 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DLM_4203 ccc45e4c144693b8a2b7dc0b38cca2a4 304 SUPERFAMILY SSF54211 134 278 5.76E-52 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_4470 9e9d62d80556fb1c6011805345fd144d 198 Pfam PF03922 OmpW family 21 198 2.1E-51 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 DLM_4470 9e9d62d80556fb1c6011805345fd144d 198 Gene3D G3DSA:2.40.160.20 19 198 1.7E-60 T 23-10-2018 DLM_4470 9e9d62d80556fb1c6011805345fd144d 198 SUPERFAMILY SSF56925 20 198 1.62E-26 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DLM_2482 1a1364dfb6ae0c48a639a7aa705e20a6 512 SUPERFAMILY SSF75304 18 510 2.49E-118 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_2482 1a1364dfb6ae0c48a639a7aa705e20a6 512 Gene3D G3DSA:3.90.1300.10 19 512 3.8E-148 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_2482 1a1364dfb6ae0c48a639a7aa705e20a6 512 ProSitePatterns PS00571 Amidases signature. 161 192 - T 23-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DLM_2482 1a1364dfb6ae0c48a639a7aa705e20a6 512 Pfam PF01425 Amidase 40 491 9.9E-88 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DLM_3312 b31ab18f6d2f61ea8e822f2437443371 305 Gene3D G3DSA:3.40.50.10800 159 254 4.8E-87 T 23-10-2018 DLM_3312 b31ab18f6d2f61ea8e822f2437443371 305 Gene3D G3DSA:3.40.50.10800 74 298 4.8E-87 T 23-10-2018 DLM_3312 b31ab18f6d2f61ea8e822f2437443371 305 Pfam PF02445 Quinolinate synthetase A protein 3 298 6.2E-86 T 23-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DLM_3312 b31ab18f6d2f61ea8e822f2437443371 305 SUPERFAMILY SSF142754 3 299 3.27E-87 T 23-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DLM_3312 b31ab18f6d2f61ea8e822f2437443371 305 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 4 300 1.8E-82 T 23-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DLM_3312 b31ab18f6d2f61ea8e822f2437443371 305 Gene3D G3DSA:3.40.50.10800 3 279 4.8E-87 T 23-10-2018 DLM_4256 352b858ae6773b785eafa86fc469ae3c 212 Pfam PF02545 Maf-like protein 21 204 5.4E-55 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 DLM_4256 352b858ae6773b785eafa86fc469ae3c 212 PIRSF PIRSF006305 13 211 6.0E-52 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 DLM_4256 352b858ae6773b785eafa86fc469ae3c 212 TIGRFAM TIGR00172 maf: septum formation protein Maf 20 204 4.9E-51 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 DLM_4256 352b858ae6773b785eafa86fc469ae3c 212 SUPERFAMILY SSF52972 20 204 1.11E-60 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DLM_4256 352b858ae6773b785eafa86fc469ae3c 212 Hamap MF_00528 Septum formation protein Maf [maf]. 21 211 32.003 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 DLM_4256 352b858ae6773b785eafa86fc469ae3c 212 Gene3D G3DSA:3.90.950.10 20 209 1.3E-65 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DLM_1879 d58f6232fe8ab3eacfd278c277df7910 252 Gene3D G3DSA:1.25.40.10 19 240 7.0E-58 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_1879 d58f6232fe8ab3eacfd278c277df7910 252 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 2 235 2.3E-85 T 23-10-2018 IPR017689 Outer membrane protein assembly factor BamD DLM_1879 d58f6232fe8ab3eacfd278c277df7910 252 SUPERFAMILY SSF48452 19 108 4.74E-9 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_1879 d58f6232fe8ab3eacfd278c277df7910 252 Pfam PF13525 Outer membrane lipoprotein 20 224 2.8E-63 T 23-10-2018 IPR039565 Outer membrane lipoprotein BamD-like DLM_1879 d58f6232fe8ab3eacfd278c277df7910 252 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 230 37.384 T 23-10-2018 IPR017689 Outer membrane protein assembly factor BamD DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 SUPERFAMILY SSF53748 3 388 3.3E-143 T 23-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 Pfam PF00162 Phosphoglycerate kinase 7 378 1.1E-141 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 2.8E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 38.967 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 PIRSF PIRSF000724 1 391 4.1E-137 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 Gene3D G3DSA:3.40.50.1260 8 386 6.0E-151 T 23-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_4036 cb919395e1c76a3b8b3a7e18edcd57f5 391 Gene3D G3DSA:3.40.50.1260 165 378 6.0E-151 T 23-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3921 93dfa0323717f423db5892577296e19a 187 Gene3D G3DSA:1.10.260.40 1 74 8.2E-16 T 23-10-2018 DLM_3921 93dfa0323717f423db5892577296e19a 187 Pfam PF01381 Helix-turn-helix 9 61 5.4E-15 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_3921 93dfa0323717f423db5892577296e19a 187 Gene3D G3DSA:2.60.120.10 97 185 4.5E-17 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_3921 93dfa0323717f423db5892577296e19a 187 SMART SM00530 8 63 7.2E-14 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_3921 93dfa0323717f423db5892577296e19a 187 SUPERFAMILY SSF47413 2 65 8.58E-16 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_3921 93dfa0323717f423db5892577296e19a 187 SUPERFAMILY SSF51182 97 176 1.37E-14 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2653 c9ddc59ee60f766b76bf8f66a296ba0e 375 SUPERFAMILY SSF58104 70 373 5.75E-63 T 23-10-2018 DLM_2653 c9ddc59ee60f766b76bf8f66a296ba0e 375 Gene3D G3DSA:3.30.450.20 18 145 5.1E-24 T 23-10-2018 DLM_2653 c9ddc59ee60f766b76bf8f66a296ba0e 375 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 199 373 9.8E-46 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2653 c9ddc59ee60f766b76bf8f66a296ba0e 375 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 274 303 2.7E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2653 c9ddc59ee60f766b76bf8f66a296ba0e 375 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 197 2.7E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2653 c9ddc59ee60f766b76bf8f66a296ba0e 375 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 245 272 2.7E-21 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2653 c9ddc59ee60f766b76bf8f66a296ba0e 375 SMART SM00283 141 374 6.8E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2653 c9ddc59ee60f766b76bf8f66a296ba0e 375 Gene3D G3DSA:1.10.287.950 162 375 1.1E-51 T 23-10-2018 DLM_2599 584b2a50ee969aea00a3b63f74a5eeb8 479 SUPERFAMILY SSF52172 40 125 4.15E-5 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2326 da913a08a9ce53e48f27b1278e4d25f6 246 Gene3D G3DSA:1.10.3920.10 45 211 1.3E-18 T 23-10-2018 IPR028983 PA2201-like, C-terminal DLM_2326 da913a08a9ce53e48f27b1278e4d25f6 246 Pfam PF08928 Domain of unknown function (DUF1910) 2 78 8.9E-13 T 23-10-2018 IPR015024 Domain of unknown function DUF1910 DLM_2326 da913a08a9ce53e48f27b1278e4d25f6 246 Pfam PF08929 Domain of unknown function (DUF1911) 87 208 1.9E-30 T 23-10-2018 IPR015025 Domain of unknown function DUF1911 DLM_2326 da913a08a9ce53e48f27b1278e4d25f6 246 SUPERFAMILY SSF140731 45 209 1.28E-39 T 23-10-2018 IPR028983 PA2201-like, C-terminal DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 PRINTS PR00050 Cold shock protein signature 25 34 4.3E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 PRINTS PR00050 Cold shock protein signature 40 58 4.3E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 PRINTS PR00050 Cold shock protein signature 4 19 4.3E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 Gene3D G3DSA:2.40.50.140 3 67 4.1E-31 T 23-10-2018 DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 SUPERFAMILY SSF50249 1 65 1.5E-25 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 8.1E-31 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-10-2018 IPR019844 Cold-shock conserved site DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 SMART SM00357 3 67 8.3E-31 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 DLM_3303 c021ab91f2e8c3a216609e0555e2bdfe 67 PIRSF PIRSF002599 1 67 2.2E-23 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 Gene3D G3DSA:3.40.50.1000 6 188 2.1E-47 T 23-10-2018 IPR023214 HAD superfamily DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 SUPERFAMILY SSF56784 3 211 1.23E-47 T 23-10-2018 IPR036412 HAD-like superfamily DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 Gene3D G3DSA:1.10.150.240 19 85 2.1E-47 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 183 1.2E-15 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 4.7E-22 T 23-10-2018 DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 7.7E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 7.7E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 7.7E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_2163 fed25f792fbb14c4812c4c858c521ea5 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 7.7E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_2597 e8537d9a3ae2e3dee74eebb2e7a3d1ab 255 Gene3D G3DSA:3.60.15.10 3 240 1.5E-30 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_2597 e8537d9a3ae2e3dee74eebb2e7a3d1ab 255 SUPERFAMILY SSF56281 24 241 2.94E-27 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_2597 e8537d9a3ae2e3dee74eebb2e7a3d1ab 255 Pfam PF00753 Metallo-beta-lactamase superfamily 25 220 1.1E-14 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_2597 e8537d9a3ae2e3dee74eebb2e7a3d1ab 255 SMART SM00849 26 220 9.8E-7 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_2897 d57925740d9c5eba7f3f536a77940e05 109 Pfam PF00072 Response regulator receiver domain 2 100 7.3E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2897 d57925740d9c5eba7f3f536a77940e05 109 SMART SM00448 1 100 1.0E-17 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2897 d57925740d9c5eba7f3f536a77940e05 109 SUPERFAMILY SSF52172 2 105 3.13E-29 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2897 d57925740d9c5eba7f3f536a77940e05 109 Gene3D G3DSA:3.40.50.2300 1 106 6.5E-32 T 23-10-2018 DLM_1067 e097ee58953f07002e56680e7e8ee318 267 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 263 35.452 T 23-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DLM_1067 e097ee58953f07002e56680e7e8ee318 267 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 1.3E-93 T 23-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DLM_1067 e097ee58953f07002e56680e7e8ee318 267 Gene3D G3DSA:3.20.20.70 1 266 1.3E-101 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1067 e097ee58953f07002e56680e7e8ee318 267 SUPERFAMILY SSF51366 12 263 6.83E-85 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DLM_1067 e097ee58953f07002e56680e7e8ee318 267 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 57 75 - T 23-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 DLM_3966 d60b4671a45fa53246bc80e7b949608f 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 1.4E-27 T 23-10-2018 IPR021250 Protein of unknown function DUF2789 DLM_3966 d60b4671a45fa53246bc80e7b949608f 77 Gene3D G3DSA:1.10.10.1130 1 77 8.0E-29 T 23-10-2018 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 Pfam PF02743 Cache domain 35 245 1.7E-15 T 23-10-2018 IPR033479 Double Cache domain 1 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 SMART SM00283 398 659 7.8E-69 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 Gene3D G3DSA:3.30.450.20 50 295 1.4E-49 T 23-10-2018 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 Gene3D G3DSA:3.30.450.20 61 205 1.4E-49 T 23-10-2018 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 Pfam PF00672 HAMP domain 330 379 1.8E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 SMART SM00304 329 383 8.3E-11 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 SUPERFAMILY SSF58104 351 660 3.4E-75 T 23-10-2018 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 625 3.2E-47 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 525 554 2.9E-6 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 324 2.9E-6 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4482 bd7f4b593f916743b75487ad060f254a 660 Gene3D G3DSA:1.10.287.950 329 660 2.3E-73 T 23-10-2018 DLM_0673 df699aa33a7683026890e8159773417d 374 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 1 80 1.6E-25 T 23-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DLM_0673 df699aa33a7683026890e8159773417d 374 SUPERFAMILY SSF54826 2 82 1.69E-24 T 23-10-2018 DLM_0673 df699aa33a7683026890e8159773417d 374 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 179 210 - T 23-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DLM_0673 df699aa33a7683026890e8159773417d 374 SMART SM00922 98 229 3.9E-14 T 23-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DLM_0673 df699aa33a7683026890e8159773417d 374 SUPERFAMILY SSF51604 68 357 4.19E-76 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_0673 df699aa33a7683026890e8159773417d 374 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 55 80 - T 23-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DLM_0673 df699aa33a7683026890e8159773417d 374 Gene3D G3DSA:3.30.390.10 1 371 4.3E-157 T 23-10-2018 IPR029017 Enolase-like, N-terminal DLM_0673 df699aa33a7683026890e8159773417d 374 Gene3D G3DSA:3.20.20.120 75 339 4.3E-157 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_0673 df699aa33a7683026890e8159773417d 374 Pfam PF13378 Enolase C-terminal domain-like 166 349 8.9E-41 T 23-10-2018 IPR029065 Enolase C-terminal domain-like DLM_1143 a9ae211bd2128a0a0076da6d344a551c 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.1 T 23-10-2018 IPR023065 Uncharacterised protein family ApaG DLM_1143 a9ae211bd2128a0a0076da6d344a551c 126 SUPERFAMILY SSF110069 7 126 4.97E-46 T 23-10-2018 IPR036767 ApaG domain superfamily DLM_1143 a9ae211bd2128a0a0076da6d344a551c 126 Gene3D G3DSA:2.60.40.1470 1 126 1.1E-48 T 23-10-2018 IPR036767 ApaG domain superfamily DLM_1143 a9ae211bd2128a0a0076da6d344a551c 126 Pfam PF04379 ApaG domain 19 103 5.8E-35 T 23-10-2018 IPR007474 ApaG domain DLM_2803 5c0734a5794da5029fc8ed0a8faa07c9 320 Pfam PF00294 pfkB family carbohydrate kinase 22 313 9.5E-51 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB DLM_2803 5c0734a5794da5029fc8ed0a8faa07c9 320 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 17 318 3.4E-124 T 23-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DLM_2803 5c0734a5794da5029fc8ed0a8faa07c9 320 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 60 84 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_2803 5c0734a5794da5029fc8ed0a8faa07c9 320 SUPERFAMILY SSF53613 22 318 2.18E-61 T 23-10-2018 IPR029056 Ribokinase-like DLM_2803 5c0734a5794da5029fc8ed0a8faa07c9 320 Gene3D G3DSA:3.40.1190.20 12 319 4.0E-122 T 23-10-2018 IPR029056 Ribokinase-like DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SUPERFAMILY SSF55073 600 754 8.63E-51 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 Gene3D G3DSA:3.30.450.40 439 588 8.5E-26 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 301 423 4.5E-7 T 23-10-2018 IPR000014 PAS domain DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 Pfam PF13185 GAF domain 439 583 5.3E-13 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SUPERFAMILY SSF55785 181 294 5.9E-10 T 23-10-2018 IPR035965 PAS domain superfamily DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 Pfam PF08447 PAS fold 205 284 8.1E-11 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SMART SM00267 584 756 2.1E-63 T 23-10-2018 IPR000160 GGDEF domain DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SUPERFAMILY SSF55781 441 594 3.27E-25 T 23-10-2018 DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SMART SM00091 62 129 35.0 T 23-10-2018 IPR000014 PAS domain DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SMART SM00091 304 371 2.0E-4 T 23-10-2018 IPR000014 PAS domain DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SMART SM00091 175 244 5.3 T 23-10-2018 IPR000014 PAS domain DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 Pfam PF08448 PAS fold 310 419 1.6E-9 T 23-10-2018 IPR013656 PAS fold-4 DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 Gene3D G3DSA:3.30.450.20 298 430 9.2E-19 T 23-10-2018 DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 Gene3D G3DSA:3.30.70.270 589 756 5.8E-60 T 23-10-2018 DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SMART SM00065 440 592 8.0E-12 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 593 753 1.5E-52 T 23-10-2018 IPR000160 GGDEF domain DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 Gene3D G3DSA:3.30.450.20 176 287 1.9E-15 T 23-10-2018 DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 Pfam PF00990 Diguanylate cyclase, GGDEF domain 595 752 4.3E-49 T 23-10-2018 IPR000160 GGDEF domain DLM_3547 463c4038f3fcdc94decada1735bf18f1 762 SUPERFAMILY SSF55785 289 410 8.03E-18 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2492 135688c94870074ef58663fbf356df1e 196 SUPERFAMILY SSF51182 2 191 2.05E-52 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2492 135688c94870074ef58663fbf356df1e 196 Pfam PF05962 HutD 8 183 8.7E-55 T 23-10-2018 IPR010282 Uncharacterised protein family HutD/Ves DLM_2492 135688c94870074ef58663fbf356df1e 196 Gene3D G3DSA:2.60.120.10 7 182 1.2E-49 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2492 135688c94870074ef58663fbf356df1e 196 Gene3D G3DSA:2.60.120.10 10 114 1.2E-49 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 132 152 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 Gene3D G3DSA:3.80.30.20 126 367 6.3E-74 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 SMART SM00729 128 353 9.3E-56 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 Pfam PF04055 Radical SAM superfamily 134 311 1.3E-30 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 1 427 4.6E-175 T 23-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 427 2.1E-104 T 23-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 Gene3D G3DSA:3.40.50.12160 1 115 1.4E-24 T 23-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 Pfam PF00919 Uncharacterized protein family UPF0004 2 77 2.7E-18 T 23-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 1 429 60.531 T 23-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 SUPERFAMILY SSF102114 101 359 2.22E-55 T 23-10-2018 DLM_2356 d2ae130c850a0809594b5b6b28b84ab9 430 Gene3D G3DSA:2.40.50.140 368 430 6.7E-19 T 23-10-2018 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 SUPERFAMILY SSF53901 274 393 6.99E-40 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 PIRSF PIRSF000429 1 394 8.8E-116 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 Gene3D G3DSA:3.40.47.10 128 390 1.4E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 Pfam PF00108 Thiolase, N-terminal domain 7 263 9.5E-83 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 1.0E-40 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 SUPERFAMILY SSF53901 6 270 7.68E-77 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 Gene3D G3DSA:3.40.47.10 11 277 1.4E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_0521 6ffacd01fe76a86107f3f86cd518cb3e 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 392 1.9E-132 T 23-10-2018 IPR002155 Thiolase GO:0016747 DLM_3078 3feba1219bf518d8e5a517683a12209b 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 30.798 T 23-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DLM_3078 3feba1219bf518d8e5a517683a12209b 273 Gene3D G3DSA:3.40.50.720 116 237 2.2E-79 T 23-10-2018 DLM_3078 3feba1219bf518d8e5a517683a12209b 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 272 1.5E-84 T 23-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DLM_3078 3feba1219bf518d8e5a517683a12209b 273 Gene3D G3DSA:3.40.50.10860 5 256 2.2E-79 T 23-10-2018 DLM_3078 3feba1219bf518d8e5a517683a12209b 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 7.4E-22 T 23-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DLM_3078 3feba1219bf518d8e5a517683a12209b 273 SUPERFAMILY SSF51735 102 271 4.17E-37 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3078 3feba1219bf518d8e5a517683a12209b 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 193 4.4E-8 T 23-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DLM_3078 3feba1219bf518d8e5a517683a12209b 273 SUPERFAMILY SSF53223 2 101 9.78E-29 T 23-10-2018 DLM_3194 5ec47270fa92c6cd1a339e839cfbd4df 226 Pfam PF00849 RNA pseudouridylate synthase 27 174 1.8E-28 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_3194 5ec47270fa92c6cd1a339e839cfbd4df 226 Gene3D G3DSA:3.30.2350.10 8 225 4.4E-67 T 23-10-2018 DLM_3194 5ec47270fa92c6cd1a339e839cfbd4df 226 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 64 78 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_3194 5ec47270fa92c6cd1a339e839cfbd4df 226 SUPERFAMILY SSF55120 11 225 1.25E-58 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2922 8beebb902f7815a69e049beceedc5bf3 211 Pfam PF03734 L,D-transpeptidase catalytic domain 52 202 1.6E-10 T 23-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DLM_2922 8beebb902f7815a69e049beceedc5bf3 211 SUPERFAMILY SSF141523 47 207 5.23E-19 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DLM_2922 8beebb902f7815a69e049beceedc5bf3 211 Gene3D G3DSA:2.40.440.10 10 211 1.9E-25 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PIRSF PIRSF000099 1 430 2.7E-160 T 23-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.454 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 Pfam PF00815 Histidinol dehydrogenase 24 428 9.7E-166 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 SUPERFAMILY SSF53720 26 428 3.14E-82 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 Gene3D G3DSA:3.40.50.1980 234 350 8.7E-127 T 23-10-2018 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 1.9E-159 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 Gene3D G3DSA:3.40.50.1980 30 232 8.7E-127 T 23-10-2018 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 23-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.1E-81 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.1E-81 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.1E-81 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.1E-81 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.1E-81 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.1E-81 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.1E-81 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_3712 5e0be85fe5e9d321f4094bcf9ebb0d79 430 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.1E-81 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Gene3D G3DSA:3.10.20.30 3 63 2.3E-21 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Gene3D G3DSA:3.30.930.10 222 530 1.2E-128 T 23-10-2018 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Pfam PF03129 Anticodon binding domain 540 628 5.9E-19 T 23-10-2018 IPR004154 Anticodon-binding DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Gene3D G3DSA:3.40.50.800 531 633 7.8E-30 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 1.5E-220 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Gene3D G3DSA:3.30.980.10 70 221 1.5E-65 T 23-10-2018 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 SUPERFAMILY SSF81271 4 61 2.18E-14 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 SMART SM00863 169 218 1.3E-24 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 SUPERFAMILY SSF55186 64 240 4.71E-69 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 3.8E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 3.8E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 3.8E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 3.8E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 3.8E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 SUPERFAMILY SSF55681 242 525 6.51E-101 T 23-10-2018 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 528 1.4E-43 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 4.6E-15 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 632 34.428 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Pfam PF02824 TGS domain 5 61 3.1E-8 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 Gene3D G3DSA:3.30.54.20 130 186 1.5E-65 T 23-10-2018 DLM_2405 2c4b46f78a3f58314d3603785f31754c 633 SUPERFAMILY SSF52954 529 630 7.7E-30 T 23-10-2018 DLM_0062 626cf703361c1cdd280d17ab5700e301 484 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 470 17.949 T 23-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DLM_0062 626cf703361c1cdd280d17ab5700e301 484 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 6.6E-7 T 23-10-2018 DLM_0062 626cf703361c1cdd280d17ab5700e301 484 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 6.6E-7 T 23-10-2018 DLM_0062 626cf703361c1cdd280d17ab5700e301 484 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 413 432 6.6E-7 T 23-10-2018 DLM_0062 626cf703361c1cdd280d17ab5700e301 484 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 6.6E-7 T 23-10-2018 DLM_0062 626cf703361c1cdd280d17ab5700e301 484 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 469 4.4E-141 T 23-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DLM_0062 626cf703361c1cdd280d17ab5700e301 484 Pfam PF00361 Proton-conducting membrane transporter 125 419 3.4E-73 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_4056 689aeb3ed5338d9656f0bdfa1b60861f 481 SUPERFAMILY SSF102114 30 461 8.76E-66 T 23-10-2018 DLM_4056 689aeb3ed5338d9656f0bdfa1b60861f 481 Gene3D G3DSA:3.80.30.20 15 386 1.5E-71 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DLM_4056 689aeb3ed5338d9656f0bdfa1b60861f 481 Pfam PF04055 Radical SAM superfamily 78 235 7.9E-11 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_4056 689aeb3ed5338d9656f0bdfa1b60861f 481 SMART SM00729 61 283 5.3E-24 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_1643 7106d96590708ce2ec910a9e76e3273b 315 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 312 51.918 T 23-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 DLM_1643 7106d96590708ce2ec910a9e76e3273b 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_1643 7106d96590708ce2ec910a9e76e3273b 315 Gene3D G3DSA:1.20.225.30 244 314 6.1E-13 T 23-10-2018 DLM_1643 7106d96590708ce2ec910a9e76e3273b 315 SUPERFAMILY SSF51395 2 308 2.38E-70 T 23-10-2018 DLM_1643 7106d96590708ce2ec910a9e76e3273b 315 Gene3D G3DSA:3.20.20.70 1 240 1.4E-77 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1643 7106d96590708ce2ec910a9e76e3273b 315 Pfam PF01207 Dihydrouridine synthase (Dus) 4 270 1.1E-68 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_1643 7106d96590708ce2ec910a9e76e3273b 315 PIRSF PIRSF006621 1 314 8.8E-78 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DLM_2538 22f18988693fa4f9d30e078bbf218cf7 89 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 22 77 2.1E-22 T 23-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DLM_2538 22f18988693fa4f9d30e078bbf218cf7 89 SUPERFAMILY SSF116842 16 84 6.67E-21 T 23-10-2018 DLM_2538 22f18988693fa4f9d30e078bbf218cf7 89 PIRSF PIRSF006488 10 89 9.5E-24 T 23-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DLM_2538 22f18988693fa4f9d30e078bbf218cf7 89 Gene3D G3DSA:1.10.287.1040 16 88 6.2E-26 T 23-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 DLM_2538 22f18988693fa4f9d30e078bbf218cf7 89 Pfam PF02609 Exonuclease VII small subunit 23 73 5.2E-21 T 23-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DLM_2538 22f18988693fa4f9d30e078bbf218cf7 89 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 22 62 8.0E-15 T 23-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DLM_2538 22f18988693fa4f9d30e078bbf218cf7 89 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 22 82 14.846 T 23-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DLM_0376 ec387ebe0db9a6565e212ac532416364 135 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 30 122 2.4E-16 T 23-10-2018 IPR039366 YscW/ExsB DLM_1504 849b7cab7fd4534b78c9f106a3a766b4 134 Pfam PF09086 Domain of unknown function (DUF1924) 36 128 1.5E-36 T 23-10-2018 IPR015170 Protein of unknown function DUF1924 DLM_1504 849b7cab7fd4534b78c9f106a3a766b4 134 Gene3D G3DSA:1.10.760.10 15 133 1.3E-43 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_1504 849b7cab7fd4534b78c9f106a3a766b4 134 SUPERFAMILY SSF46626 26 130 1.29E-29 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_1300 8cf08b3803c8a6130023eefcdbdd2d91 618 SUPERFAMILY SSF56024 325 555 1.23E-14 T 23-10-2018 DLM_1300 8cf08b3803c8a6130023eefcdbdd2d91 618 SUPERFAMILY SSF56024 3 283 3.31E-21 T 23-10-2018 DLM_1300 8cf08b3803c8a6130023eefcdbdd2d91 618 SMART SM00155 505 532 0.001 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_1300 8cf08b3803c8a6130023eefcdbdd2d91 618 SMART SM00155 193 225 2.5 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DLM_1300 8cf08b3803c8a6130023eefcdbdd2d91 618 Gene3D G3DSA:3.30.870.10 436 559 6.3E-8 T 23-10-2018 DLM_1300 8cf08b3803c8a6130023eefcdbdd2d91 618 Pfam PF13091 PLD-like domain 507 551 7.9E-7 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_3818 78606a099783ebcf1e091c5f803e01f4 183 Pfam PF13681 Type IV pilus assembly protein PilX C-term 116 181 2.6E-11 T 23-10-2018 IPR025205 PilX/PilW C-terminal domain DLM_3818 78606a099783ebcf1e091c5f803e01f4 183 Pfam PF14341 PilX N-terminal 11 61 6.3E-9 T 23-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain DLM_2560 436048ea6444c270c096401c88f07c41 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 293 1.2E-49 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_3762 f8102cb49e29c614045c01b52a18af41 525 PIRSF PIRSF000414 1 525 1.0E-219 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_3762 f8102cb49e29c614045c01b52a18af41 525 Pfam PF02142 MGS-like domain 16 131 1.0E-29 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain DLM_3762 f8102cb49e29c614045c01b52a18af41 525 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 456 4.9E-119 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_3762 f8102cb49e29c614045c01b52a18af41 525 SUPERFAMILY SSF53927 219 525 1.1E-128 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DLM_3762 f8102cb49e29c614045c01b52a18af41 525 Gene3D G3DSA:3.40.140.20 217 371 2.3E-58 T 23-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_3762 f8102cb49e29c614045c01b52a18af41 525 Gene3D G3DSA:3.40.140.20 388 525 3.8E-61 T 23-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_3762 f8102cb49e29c614045c01b52a18af41 525 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 4 525 45.393 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_3762 f8102cb49e29c614045c01b52a18af41 525 SMART SM00851 16 131 1.4E-64 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain DLM_3762 f8102cb49e29c614045c01b52a18af41 525 SUPERFAMILY SSF52335 4 196 6.41E-73 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DLM_3762 f8102cb49e29c614045c01b52a18af41 525 SMART SM00798 136 457 1.3E-208 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_3762 f8102cb49e29c614045c01b52a18af41 525 Gene3D G3DSA:3.40.50.1380 1 198 6.4E-88 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DLM_3762 f8102cb49e29c614045c01b52a18af41 525 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 6 525 3.7E-222 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DLM_3555 20404e914bd90da0b4e50cb40be272bd 426 Gene3D G3DSA:1.20.1250.20 221 420 3.0E-11 T 23-10-2018 DLM_3555 20404e914bd90da0b4e50cb40be272bd 426 TIGRFAM TIGR00901 2A0125: AmpG-like permease 28 374 2.2E-123 T 23-10-2018 DLM_3555 20404e914bd90da0b4e50cb40be272bd 426 Gene3D G3DSA:1.20.1250.20 3 200 9.3E-15 T 23-10-2018 DLM_3555 20404e914bd90da0b4e50cb40be272bd 426 Pfam PF07690 Major Facilitator Superfamily 21 378 4.1E-20 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_3555 20404e914bd90da0b4e50cb40be272bd 426 SUPERFAMILY SSF103473 17 418 6.67E-33 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2173 795d28400ea57c77ed4347993e901431 260 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2173 795d28400ea57c77ed4347993e901431 260 SMART SM00382 27 212 2.2E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2173 795d28400ea57c77ed4347993e901431 260 Pfam PF00005 ABC transporter 27 163 1.1E-23 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2173 795d28400ea57c77ed4347993e901431 260 SUPERFAMILY SSF52540 2 226 2.49E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2173 795d28400ea57c77ed4347993e901431 260 Gene3D G3DSA:3.40.50.300 1 245 4.0E-53 T 23-10-2018 DLM_1385 30e29225fcb50782c155d7ebe773dd36 372 SUPERFAMILY SSF53822 27 370 1.48E-80 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1385 30e29225fcb50782c155d7ebe773dd36 372 Gene3D G3DSA:3.40.50.2300 31 347 7.9E-102 T 23-10-2018 DLM_1385 30e29225fcb50782c155d7ebe773dd36 372 Gene3D G3DSA:3.40.50.2300 143 277 7.9E-102 T 23-10-2018 DLM_1385 30e29225fcb50782c155d7ebe773dd36 372 Pfam PF13458 Periplasmic binding protein 27 365 3.6E-56 T 23-10-2018 IPR028081 Leucine-binding protein domain DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 TIGRFAM TIGR02279 PaaC-3OHAcCoADH: 3-hydroxyacyl-CoA dehydrogenase PaaC 2 506 2.8E-208 T 23-10-2018 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC GO:0008691|GO:0010124 DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 Gene3D G3DSA:3.40.50.720 4 191 2.8E-60 T 23-10-2018 DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 Gene3D G3DSA:3.30.750.190 296 416 4.8E-90 T 23-10-2018 DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 185 3.0E-55 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 SUPERFAMILY SSF51735 6 188 4.47E-50 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 419 503 1.5E-15 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 286 1.7E-26 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 SUPERFAMILY SSF48179 188 292 2.81E-29 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 SUPERFAMILY SSF48179 416 506 1.36E-19 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_3144 ab53a680cef6ee80ae32d2c7a073c5e4 508 Gene3D G3DSA:1.10.1040.50 192 499 4.8E-90 T 23-10-2018 DLM_3254 f313b40b419a47daf91ff99c44f71784 248 SUPERFAMILY SSF52402 26 207 6.77E-20 T 23-10-2018 DLM_3254 f313b40b419a47daf91ff99c44f71784 248 Pfam PF01012 Electron transfer flavoprotein domain 22 169 2.5E-14 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DLM_3254 f313b40b419a47daf91ff99c44f71784 248 Gene3D G3DSA:3.40.50.620 1 244 1.2E-25 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_0604 f893a8d12368a8c5959a6df4066b82ea 232 SMART SM00448 1 109 1.5E-21 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0604 f893a8d12368a8c5959a6df4066b82ea 232 Pfam PF00072 Response regulator receiver domain 1 108 8.7E-21 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0604 f893a8d12368a8c5959a6df4066b82ea 232 SUPERFAMILY SSF47226 95 220 6.15E-19 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_0604 f893a8d12368a8c5959a6df4066b82ea 232 Gene3D G3DSA:1.20.120.160 126 231 5.7E-16 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_0604 f893a8d12368a8c5959a6df4066b82ea 232 SMART SM00073 133 230 5.9E-8 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_0604 f893a8d12368a8c5959a6df4066b82ea 232 SUPERFAMILY SSF52172 1 113 5.12E-29 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0604 f893a8d12368a8c5959a6df4066b82ea 232 Gene3D G3DSA:3.40.50.2300 1 121 4.0E-28 T 23-10-2018 DLM_0604 f893a8d12368a8c5959a6df4066b82ea 232 Pfam PF01627 Hpt domain 144 222 1.0E-8 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 175 257 1.4E-27 T 23-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 138 9.0E-11 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 33 8.7E-4 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 3 256 1.7E-101 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 44.029 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 PIRSF PIRSF000456 1 258 6.1E-101 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 Gene3D G3DSA:1.20.1180.10 192 258 4.1E-22 T 23-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 SUPERFAMILY SSF51161 2 258 5.56E-78 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_1964 88ff247692b8fff402232af1a9ce6a31 258 Gene3D G3DSA:2.160.10.10 2 191 1.6E-51 T 23-10-2018 DLM_3298 e882bceb35c55dee697f28cadd91dbda 269 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 52 221 4.2E-50 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DLM_3298 e882bceb35c55dee697f28cadd91dbda 269 Pfam PF00849 RNA pseudouridylate synthase 48 191 5.0E-12 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_3298 e882bceb35c55dee697f28cadd91dbda 269 Gene3D G3DSA:3.30.70.580 42 111 4.7E-23 T 23-10-2018 DLM_3298 e882bceb35c55dee697f28cadd91dbda 269 SUPERFAMILY SSF55120 47 226 3.36E-39 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_3298 e882bceb35c55dee697f28cadd91dbda 269 Gene3D G3DSA:3.30.70.1560 112 211 4.8E-37 T 23-10-2018 DLM_2334 23a93f15a0ef427b023d838f48160a49 107 Gene3D G3DSA:2.40.50.970 1 75 3.3E-17 T 23-10-2018 IPR037254 HupF/HypC superfamily DLM_2334 23a93f15a0ef427b023d838f48160a49 107 Pfam PF01455 HupF/HypC family 1 65 3.8E-20 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2334 23a93f15a0ef427b023d838f48160a49 107 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 2.2E-13 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2334 23a93f15a0ef427b023d838f48160a49 107 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 2.2E-13 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2334 23a93f15a0ef427b023d838f48160a49 107 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 56 68 2.2E-13 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2334 23a93f15a0ef427b023d838f48160a49 107 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 38 54 2.2E-13 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2334 23a93f15a0ef427b023d838f48160a49 107 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 73 2.4E-25 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2334 23a93f15a0ef427b023d838f48160a49 107 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 23-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site DLM_2334 23a93f15a0ef427b023d838f48160a49 107 SUPERFAMILY SSF159127 1 75 2.49E-20 T 23-10-2018 IPR037254 HupF/HypC superfamily DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 Gene3D G3DSA:1.10.287.950 210 541 2.0E-76 T 23-10-2018 DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 182 1.3E-19 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 SUPERFAMILY SSF58104 240 541 6.93E-71 T 23-10-2018 DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 4.9E-5 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 4.9E-5 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 4.9E-5 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 506 9.2E-44 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 SMART SM00283 279 540 5.7E-72 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 SMART SM00304 271 324 47.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1703 3ebd381e5a437e2c47c1849d7e2f2bdf 541 SMART SM00304 210 264 1.3E-4 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3432 84bbdd36d49bb71efa94b87103fcdb4f 309 Pfam PF01136 Peptidase family U32 84 276 2.5E-21 T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.0E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.0E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.0E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.1E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0178 0fb714b1cbf32951e394514247545f61 258 SUPERFAMILY SSF51735 6 257 9.48E-74 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0178 0fb714b1cbf32951e394514247545f61 258 Gene3D G3DSA:3.40.50.720 1 258 1.2E-79 T 23-10-2018 DLM_0178 0fb714b1cbf32951e394514247545f61 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 7 258 2.8E-103 T 23-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 DLM_0178 0fb714b1cbf32951e394514247545f61 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 256 4.5E-54 T 23-10-2018 DLM_0362 bdefe604da0841b2a3a2e5286bc02b40 150 Gene3D G3DSA:2.60.40.1820 22 150 9.9E-17 T 23-10-2018 DLM_0362 bdefe604da0841b2a3a2e5286bc02b40 150 SMART SM00769 31 148 2.4E-15 T 23-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 DLM_0362 bdefe604da0841b2a3a2e5286bc02b40 150 ProDom PD010978 LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE 25 150 2.0E-6 T 23-10-2018 DLM_0362 bdefe604da0841b2a3a2e5286bc02b40 150 SUPERFAMILY SSF117070 9 150 2.75E-30 T 23-10-2018 DLM_0362 bdefe604da0841b2a3a2e5286bc02b40 150 Pfam PF03168 Late embryogenesis abundant protein 51 142 6.8E-17 T 23-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup DLM_3716 d3c74f766127553c197344b9a8ba1c96 302 Gene3D G3DSA:1.10.357.140 25 185 6.1E-12 T 23-10-2018 DLM_3716 d3c74f766127553c197344b9a8ba1c96 302 Pfam PF01040 UbiA prenyltransferase family 32 280 7.7E-54 T 23-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DLM_3716 d3c74f766127553c197344b9a8ba1c96 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 18.707 T 23-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DLM_3716 d3c74f766127553c197344b9a8ba1c96 302 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 23-10-2018 IPR030470 UbiA prenyltransferase conserved site DLM_3716 d3c74f766127553c197344b9a8ba1c96 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 295 1.1E-85 T 23-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DLM_4220 86d9778512019a5895f16f5c2b996610 342 Pfam PF01212 Beta-eliminating lyase 5 285 9.7E-96 T 23-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DLM_4220 86d9778512019a5895f16f5c2b996610 342 SUPERFAMILY SSF53383 4 341 2.66E-118 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4220 86d9778512019a5895f16f5c2b996610 342 Gene3D G3DSA:3.40.640.10 1 247 3.3E-90 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_4220 86d9778512019a5895f16f5c2b996610 342 PIRSF PIRSF017617 1 342 1.4E-125 T 23-10-2018 IPR023603 Threonine aldolase DLM_4220 86d9778512019a5895f16f5c2b996610 342 Gene3D G3DSA:3.90.1150.10 248 342 2.3E-22 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0029 c705dc1a9af64855ceacf87ddcc1ae12 203 Gene3D G3DSA:1.20.120.80 18 203 6.6E-54 T 23-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0029 c705dc1a9af64855ceacf87ddcc1ae12 203 Pfam PF00510 Cytochrome c oxidase subunit III 27 201 6.5E-14 T 23-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0029 c705dc1a9af64855ceacf87ddcc1ae12 203 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 203 9.2E-80 T 23-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 DLM_0029 c705dc1a9af64855ceacf87ddcc1ae12 203 SUPERFAMILY SSF81452 5 201 2.62E-54 T 23-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0728 2547eeb57deed6a54fecbbe3255104d1 301 Pfam PF01343 Peptidase family S49 119 261 8.0E-34 T 23-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DLM_0728 2547eeb57deed6a54fecbbe3255104d1 301 Gene3D G3DSA:3.90.226.10 57 255 2.5E-55 T 23-10-2018 DLM_0728 2547eeb57deed6a54fecbbe3255104d1 301 SUPERFAMILY SSF52096 51 253 1.18E-35 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_0728 2547eeb57deed6a54fecbbe3255104d1 301 Gene3D G3DSA:3.40.1750.20 157 223 2.5E-55 T 23-10-2018 DLM_3444 1e9f9dd534260f681ad1ad12b384ad70 535 Gene3D G3DSA:3.40.50.12780 1 430 1.0E-123 T 23-10-2018 DLM_3444 1e9f9dd534260f681ad1ad12b384ad70 535 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 23-10-2018 IPR020845 AMP-binding, conserved site DLM_3444 1e9f9dd534260f681ad1ad12b384ad70 535 SUPERFAMILY SSF56801 7 531 1.31E-137 T 23-10-2018 DLM_3444 1e9f9dd534260f681ad1ad12b384ad70 535 Gene3D G3DSA:3.30.300.310 431 534 2.5E-33 T 23-10-2018 DLM_3444 1e9f9dd534260f681ad1ad12b384ad70 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 2.0E-19 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DLM_3444 1e9f9dd534260f681ad1ad12b384ad70 535 Pfam PF00501 AMP-binding enzyme 13 435 1.5E-88 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_3987 70e5b1a7df301faeccf0685c04843df0 365 Pfam PF12698 ABC-2 family transporter protein 26 357 6.0E-43 T 23-10-2018 DLM_3987 70e5b1a7df301faeccf0685c04843df0 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 2.2E-6 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_3987 70e5b1a7df301faeccf0685c04843df0 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 2.2E-6 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_3987 70e5b1a7df301faeccf0685c04843df0 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 2.2E-6 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_2205 bde65ef02681b88a26c93de0472e900c 223 Gene3D G3DSA:3.60.20.10 1 214 3.1E-62 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_2205 bde65ef02681b88a26c93de0472e900c 223 Pfam PF06267 Family of unknown function (DUF1028) 2 191 3.5E-59 T 23-10-2018 IPR010430 Protein of unknown function DUF1028 DLM_2205 bde65ef02681b88a26c93de0472e900c 223 SUPERFAMILY SSF56235 1 222 7.56E-70 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_0737 9a97324010cea15896c17ff6d5564d18 318 SUPERFAMILY SSF161098 32 311 6.02E-43 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0737 9a97324010cea15896c17ff6d5564d18 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 302 3.0E-13 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0737 9a97324010cea15896c17ff6d5564d18 318 Gene3D G3DSA:1.10.3720.10 31 313 3.0E-41 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2114 5b483cf03675d2dba570e7e3b633a0c6 237 Gene3D G3DSA:3.40.50.300 9 155 7.9E-9 T 23-10-2018 DLM_2114 5b483cf03675d2dba570e7e3b633a0c6 237 Pfam PF13401 AAA domain 29 138 2.0E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2114 5b483cf03675d2dba570e7e3b633a0c6 237 SUPERFAMILY SSF52540 28 218 5.76E-13 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2206 6d983a87cf471e6f12e6785162844019 140 Gene3D G3DSA:3.30.1330.40 9 137 1.4E-31 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_2206 6d983a87cf471e6f12e6785162844019 140 SUPERFAMILY SSF55298 23 138 1.57E-29 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_2206 6d983a87cf471e6f12e6785162844019 140 Pfam PF01042 Endoribonuclease L-PSP 25 133 3.5E-20 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DLM_4007 a68833d476bc36ba93f5acfad4a9b745 130 SUPERFAMILY SSF54593 1 127 6.44E-22 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_4007 a68833d476bc36ba93f5acfad4a9b745 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 124 1.0E-7 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_4007 a68833d476bc36ba93f5acfad4a9b745 130 Gene3D G3DSA:3.10.180.10 3 128 1.6E-23 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2869 7e1c96de670ca969a4b3f80ee1fd0cc6 152 SUPERFAMILY SSF54975 1 102 3.6E-23 T 23-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DLM_2869 7e1c96de670ca969a4b3f80ee1fd0cc6 152 Gene3D G3DSA:3.30.70.3200 1 144 1.9E-25 T 23-10-2018 DLM_2869 7e1c96de670ca969a4b3f80ee1fd0cc6 152 Pfam PF04940 Sensors of blue-light using FAD 1 89 7.8E-20 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 DLM_2869 7e1c96de670ca969a4b3f80ee1fd0cc6 152 SMART SM01034 1 93 4.7E-14 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 SUPERFAMILY SSF55073 197 354 1.41E-51 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 SUPERFAMILY SSF55785 75 188 3.81E-19 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 Pfam PF00563 EAL domain 370 604 1.4E-72 T 23-10-2018 IPR001633 EAL domain DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 69 187 1.6E-13 T 23-10-2018 IPR000014 PAS domain DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 SMART SM00052 363 609 2.7E-99 T 23-10-2018 IPR001633 EAL domain DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 Gene3D G3DSA:3.30.70.270 191 369 1.2E-58 T 23-10-2018 DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 Gene3D G3DSA:3.30.450.20 59 190 5.5E-23 T 23-10-2018 DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 SMART SM00091 64 131 4.2E-5 T 23-10-2018 IPR000014 PAS domain DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 SUPERFAMILY SSF141868 369 620 9.42E-82 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 349 1.3E-46 T 23-10-2018 IPR000160 GGDEF domain DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 SMART SM00267 181 353 2.8E-63 T 23-10-2018 IPR000160 GGDEF domain DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 352 2.4E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 Gene3D G3DSA:3.20.20.450 370 625 1.7E-88 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2180 8912be1a3c350ba504af39c4c3cbe652 633 Pfam PF13426 PAS domain 75 180 6.1E-13 T 23-10-2018 IPR000014 PAS domain DLM_0655 139b53561c72fe4374584174824dc013 126 Pfam PF02261 Aspartate decarboxylase 1 114 6.7E-50 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DLM_0655 139b53561c72fe4374584174824dc013 126 Gene3D G3DSA:2.40.40.20 1 126 7.7E-54 T 23-10-2018 DLM_0655 139b53561c72fe4374584174824dc013 126 PIRSF PIRSF006246 1 125 1.8E-52 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DLM_0655 139b53561c72fe4374584174824dc013 126 SUPERFAMILY SSF50692 1 120 1.49E-48 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DLM_0655 139b53561c72fe4374584174824dc013 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 72.002 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DLM_0655 139b53561c72fe4374584174824dc013 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 2.0E-56 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DLM_0655 139b53561c72fe4374584174824dc013 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 124 7.0E-50 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DLM_2930 fb2703c9c6f13214aab8ebd2a19dafb1 353 Pfam PF03466 LysR substrate binding domain 134 337 1.5E-49 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2930 fb2703c9c6f13214aab8ebd2a19dafb1 353 SUPERFAMILY SSF46785 50 158 1.25E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2930 fb2703c9c6f13214aab8ebd2a19dafb1 353 Gene3D G3DSA:1.10.10.10 49 134 2.9E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2930 fb2703c9c6f13214aab8ebd2a19dafb1 353 Gene3D G3DSA:3.40.190.290 138 337 5.8E-69 T 23-10-2018 DLM_2930 fb2703c9c6f13214aab8ebd2a19dafb1 353 SUPERFAMILY SSF53850 135 341 1.25E-51 T 23-10-2018 DLM_2930 fb2703c9c6f13214aab8ebd2a19dafb1 353 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 52 108 2.6E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1357 4e2d82e2f1a25db663e91f80b126f948 379 SUPERFAMILY SSF53807 32 364 5.49E-44 T 23-10-2018 DLM_1357 4e2d82e2f1a25db663e91f80b126f948 379 Pfam PF01497 Periplasmic binding protein 100 321 1.2E-24 T 23-10-2018 IPR002491 ABC transporter periplasmic binding domain DLM_1357 4e2d82e2f1a25db663e91f80b126f948 379 Gene3D G3DSA:3.40.50.1980 27 366 2.1E-83 T 23-10-2018 DLM_2602 8922d0fd34d775d4eb9381884ff65240 120 Pfam PF03259 Roadblock/LC7 domain 17 96 2.1E-17 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain DLM_2602 8922d0fd34d775d4eb9381884ff65240 120 SUPERFAMILY SSF103196 4 120 1.46E-30 T 23-10-2018 DLM_2602 8922d0fd34d775d4eb9381884ff65240 120 Gene3D G3DSA:3.30.450.30 2 120 3.9E-32 T 23-10-2018 DLM_2602 8922d0fd34d775d4eb9381884ff65240 120 SMART SM00960 6 96 2.7E-25 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain DLM_4055 3d2287cdf2a728a6759c60120c6683ca 213 PIRSF PIRSF000190 2 213 2.8E-74 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DLM_4055 3d2287cdf2a728a6759c60120c6683ca 213 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 213 2.9E-84 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DLM_4055 3d2287cdf2a728a6759c60120c6683ca 213 Gene3D G3DSA:2.30.110.10 2 213 8.2E-77 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DLM_4055 3d2287cdf2a728a6759c60120c6683ca 213 SUPERFAMILY SSF50475 17 213 1.63E-64 T 23-10-2018 DLM_4055 3d2287cdf2a728a6759c60120c6683ca 213 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 23-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DLM_4055 3d2287cdf2a728a6759c60120c6683ca 213 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 118 2.1E-24 T 23-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DLM_4055 3d2287cdf2a728a6759c60120c6683ca 213 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 213 4.2E-18 T 23-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DLM_4055 3d2287cdf2a728a6759c60120c6683ca 213 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 213 38.244 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DLM_2195 71abb03d8781e4a8e596d5ee0a782839 410 Gene3D G3DSA:1.20.1250.20 22 404 1.7E-42 T 23-10-2018 DLM_2195 71abb03d8781e4a8e596d5ee0a782839 410 Pfam PF07690 Major Facilitator Superfamily 34 322 4.3E-29 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2195 71abb03d8781e4a8e596d5ee0a782839 410 SUPERFAMILY SSF103473 22 402 1.23E-49 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0581 e52badf6bb46d60fe6ec90b4c8c0d238 163 Gene3D G3DSA:3.30.450.150 1 162 1.8E-48 T 23-10-2018 IPR038084 GlcG-like domain superfamily DLM_0581 e52badf6bb46d60fe6ec90b4c8c0d238 163 Hamap MF_00761 UPF0303 protein . 4 155 30.391 T 23-10-2018 IPR010371 Uncharacterised protein family UPF0303 DLM_0581 e52badf6bb46d60fe6ec90b4c8c0d238 163 SUPERFAMILY SSF143744 13 152 6.54E-26 T 23-10-2018 IPR038084 GlcG-like domain superfamily DLM_0581 e52badf6bb46d60fe6ec90b4c8c0d238 163 Pfam PF03928 Haem-degrading 22 148 1.0E-28 T 23-10-2018 IPR005624 Haem-degrading DLM_0581 e52badf6bb46d60fe6ec90b4c8c0d238 163 PIRSF PIRSF008757 2 162 1.2E-53 T 23-10-2018 IPR010371 Uncharacterised protein family UPF0303 DLM_2225 58dabe2485f25477f403fd9b8dcf9582 366 Gene3D G3DSA:3.30.1220.10 254 361 8.7E-9 T 23-10-2018 IPR036627 CobW-like, C-terminal domain superfamily DLM_2225 58dabe2485f25477f403fd9b8dcf9582 366 SMART SM00833 271 361 5.4E-9 T 23-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DLM_2225 58dabe2485f25477f403fd9b8dcf9582 366 SUPERFAMILY SSF52540 5 197 1.94E-28 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2225 58dabe2485f25477f403fd9b8dcf9582 366 SUPERFAMILY SSF90002 272 359 2.35E-11 T 23-10-2018 DLM_2225 58dabe2485f25477f403fd9b8dcf9582 366 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 272 360 5.0E-13 T 23-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DLM_2225 58dabe2485f25477f403fd9b8dcf9582 366 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 195 2.7E-43 T 23-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DLM_2225 58dabe2485f25477f403fd9b8dcf9582 366 Gene3D G3DSA:3.40.50.300 4 214 2.9E-49 T 23-10-2018 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 Hamap MF_00020 Acetate kinase [ackA]. 1 385 137.918 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 Gene3D G3DSA:3.30.420.40 4 189 3.5E-55 T 23-10-2018 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 196 213 - T 23-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 SUPERFAMILY SSF53067 4 188 9.06E-49 T 23-10-2018 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 Gene3D G3DSA:3.30.420.40 190 385 6.0E-66 T 23-10-2018 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 Pfam PF00871 Acetokinase family 5 376 2.2E-95 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 23-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 SUPERFAMILY SSF53067 153 384 3.6E-68 T 23-10-2018 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 PIRSF PIRSF000722 1 385 1.7E-130 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 PRINTS PR00471 Acetate kinase family signature 169 182 1.4E-32 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 PRINTS PR00471 Acetate kinase family signature 196 217 1.4E-32 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 PRINTS PR00471 Acetate kinase family signature 365 377 1.4E-32 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 PRINTS PR00471 Acetate kinase family signature 313 329 1.4E-32 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 PRINTS PR00471 Acetate kinase family signature 5 16 1.4E-32 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 PRINTS PR00471 Acetate kinase family signature 291 304 1.4E-32 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_3187 9487a08cb44def328ec3b67c1b2cd02f 385 TIGRFAM TIGR00016 ackA: acetate kinase 4 383 2.2E-100 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DLM_4291 2b9d20fcb159357f5d9906441d63100e 204 Pfam PF00975 Thioesterase domain 5 194 1.8E-18 T 23-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 DLM_4291 2b9d20fcb159357f5d9906441d63100e 204 SUPERFAMILY SSF53474 3 202 3.12E-23 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4291 2b9d20fcb159357f5d9906441d63100e 204 Gene3D G3DSA:3.40.50.1820 2 198 1.4E-35 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1009 648e8cd7698b0ec2df2b301c4a5c96b8 277 Pfam PF00892 EamA-like transporter family 141 274 3.1E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_1009 648e8cd7698b0ec2df2b301c4a5c96b8 277 SUPERFAMILY SSF103481 36 130 2.22E-11 T 23-10-2018 DLM_1009 648e8cd7698b0ec2df2b301c4a5c96b8 277 SUPERFAMILY SSF103481 175 276 5.49E-12 T 23-10-2018 DLM_1009 648e8cd7698b0ec2df2b301c4a5c96b8 277 Gene3D G3DSA:1.10.3730.20 53 135 5.5E-6 T 23-10-2018 DLM_3958 9606f53a954f9485178113820846520f 203 SUPERFAMILY SSF52833 1 86 1.19E-17 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3958 9606f53a954f9485178113820846520f 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 82 1.9E-8 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_3958 9606f53a954f9485178113820846520f 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 107 190 1.1E-12 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal DLM_3958 9606f53a954f9485178113820846520f 203 Gene3D G3DSA:3.40.30.10 2 197 4.0E-68 T 23-10-2018 DLM_3958 9606f53a954f9485178113820846520f 203 SUPERFAMILY SSF47616 83 200 8.35E-30 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_3958 9606f53a954f9485178113820846520f 203 Gene3D G3DSA:1.20.1050.10 85 189 4.0E-68 T 23-10-2018 DLM_1821 ad265be7dbc0cf61735166462eb3c8f4 146 SUPERFAMILY SSF54637 1 143 1.9E-22 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_1821 ad265be7dbc0cf61735166462eb3c8f4 146 Pfam PF03061 Thioesterase superfamily 61 133 9.4E-11 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DLM_1821 ad265be7dbc0cf61735166462eb3c8f4 146 Gene3D G3DSA:3.10.129.10 1 146 1.1E-58 T 23-10-2018 DLM_0666 79238b21f6f1e3cfb2779858de14bc8e 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 280 2.4E-62 T 23-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 DLM_2283 9ca0dae231b6ad9d82156b35b96a278e 356 Gene3D G3DSA:3.40.50.2000 168 344 3.2E-58 T 23-10-2018 DLM_2283 9ca0dae231b6ad9d82156b35b96a278e 356 SUPERFAMILY SSF53756 9 344 6.91E-99 T 23-10-2018 DLM_2283 9ca0dae231b6ad9d82156b35b96a278e 356 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 10 340 1.8E-149 T 23-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 DLM_2283 9ca0dae231b6ad9d82156b35b96a278e 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 322 4.3E-72 T 23-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DLM_2283 9ca0dae231b6ad9d82156b35b96a278e 356 Gene3D G3DSA:3.40.50.2000 9 154 5.7E-53 T 23-10-2018 DLM_0992 c2c08b33f16ef37cc4ff649bcb74d1e8 86 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 3.6E-17 T 23-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 DLM_0992 c2c08b33f16ef37cc4ff649bcb74d1e8 86 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 3.6E-17 T 23-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 DLM_0992 c2c08b33f16ef37cc4ff649bcb74d1e8 86 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 3.6E-17 T 23-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 DLM_0992 c2c08b33f16ef37cc4ff649bcb74d1e8 86 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 3.6E-17 T 23-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 DLM_0992 c2c08b33f16ef37cc4ff649bcb74d1e8 86 Pfam PF00887 Acyl CoA binding protein 7 84 2.3E-27 T 23-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 DLM_0992 c2c08b33f16ef37cc4ff649bcb74d1e8 86 Gene3D G3DSA:1.20.80.10 1 86 1.9E-31 T 23-10-2018 IPR014352 FERM/acyl-CoA-binding protein superfamily DLM_0992 c2c08b33f16ef37cc4ff649bcb74d1e8 86 SUPERFAMILY SSF47027 3 84 1.7E-28 T 23-10-2018 IPR035984 Acyl-CoA binding protein superfamily GO:0000062 DLM_1795 d76795a5962ddfbd1c337e5e3b846e4b 563 Pfam PF01368 DHH family 75 177 5.9E-8 T 23-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DLM_1795 d76795a5962ddfbd1c337e5e3b846e4b 563 Pfam PF02272 DHHA1 domain 318 444 3.6E-25 T 23-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DLM_1795 d76795a5962ddfbd1c337e5e3b846e4b 563 Gene3D G3DSA:3.90.1640.30 48 322 2.6E-85 T 23-10-2018 DLM_1795 d76795a5962ddfbd1c337e5e3b846e4b 563 SUPERFAMILY SSF64182 48 459 8.37E-115 T 23-10-2018 IPR038763 DHH phosphoesterase superfamily DLM_1795 d76795a5962ddfbd1c337e5e3b846e4b 563 Gene3D G3DSA:3.10.310.30 323 450 1.2E-31 T 23-10-2018 DLM_1795 d76795a5962ddfbd1c337e5e3b846e4b 563 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 557 2.8E-142 T 23-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 SUPERFAMILY SSF46785 6 113 1.56E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 Gene3D G3DSA:3.40.190.10 102 283 2.1E-42 T 23-10-2018 DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 SUPERFAMILY SSF53850 92 288 1.61E-38 T 23-10-2018 DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.5E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 Gene3D G3DSA:3.40.190.10 162 256 2.1E-42 T 23-10-2018 DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 Pfam PF03466 LysR substrate binding domain 90 287 1.1E-35 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.3E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.3E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.3E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3039 b3911d19f69f6921c27e4c4eaccf89bd 295 Gene3D G3DSA:1.10.10.10 6 93 1.5E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4032 2ccb48340eb9bf010ec34ac6628629d8 83 SUPERFAMILY SSF54285 3 83 9.89E-21 T 23-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DLM_4032 2ccb48340eb9bf010ec34ac6628629d8 83 Gene3D G3DSA:3.10.20.30 3 83 1.6E-22 T 23-10-2018 IPR012675 Beta-grasp domain superfamily DLM_4032 2ccb48340eb9bf010ec34ac6628629d8 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 4 83 3.5E-19 T 23-10-2018 DLM_4032 2ccb48340eb9bf010ec34ac6628629d8 83 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 5 83 6.3E-15 T 23-10-2018 IPR010038 MoaD, archaeal-type DLM_4032 2ccb48340eb9bf010ec34ac6628629d8 83 Pfam PF02597 ThiS family 5 83 9.4E-20 T 23-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DLM_2140 3d6402cb54955c2c28d46008dd3c440d 219 SUPERFAMILY SSF54909 121 219 4.02E-17 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_2140 3d6402cb54955c2c28d46008dd3c440d 219 Gene3D G3DSA:3.30.70.100 5 95 7.3E-13 T 23-10-2018 DLM_2140 3d6402cb54955c2c28d46008dd3c440d 219 Gene3D G3DSA:3.30.70.100 112 219 5.8E-17 T 23-10-2018 DLM_2140 3d6402cb54955c2c28d46008dd3c440d 219 Pfam PF07978 NIPSNAP 122 217 4.9E-12 T 23-10-2018 IPR012577 NIPSNAP DLM_2140 3d6402cb54955c2c28d46008dd3c440d 219 Pfam PF07978 NIPSNAP 14 85 2.6E-11 T 23-10-2018 IPR012577 NIPSNAP DLM_2140 3d6402cb54955c2c28d46008dd3c440d 219 SUPERFAMILY SSF54909 9 106 2.68E-16 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 SUPERFAMILY SSF56601 1 273 4.43E-85 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 363 1.6E-22 T 23-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 Gene3D G3DSA:3.40.710.10 22 272 7.7E-87 T 23-10-2018 DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 2.8E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 2.8E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 2.8E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 Gene3D G3DSA:2.60.410.10 273 363 3.1E-28 T 23-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 SMART SM00936 273 363 3.1E-31 T 23-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 252 3.2E-78 T 23-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DLM_1732 bfe170d1cd02e6964d0939c922059e9d 381 SUPERFAMILY SSF69189 273 365 1.47E-23 T 23-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DLM_3366 ef81633de4b564b1b0643a5e81b507bc 445 SUPERFAMILY SSF81342 9 285 1.33E-97 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DLM_3366 ef81633de4b564b1b0643a5e81b507bc 445 Pfam PF00033 Cytochrome b/b6/petB 26 221 8.3E-67 T 23-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DLM_3366 ef81633de4b564b1b0643a5e81b507bc 445 PIRSF PIRSF038885 1 423 3.0E-154 T 23-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 DLM_3366 ef81633de4b564b1b0643a5e81b507bc 445 SUPERFAMILY SSF81648 290 404 1.55E-29 T 23-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DLM_3366 ef81633de4b564b1b0643a5e81b507bc 445 Gene3D G3DSA:1.20.810.10 1 435 1.8E-154 T 23-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DLM_3366 ef81633de4b564b1b0643a5e81b507bc 445 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 393 8.6E-40 T 23-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DLM_4224 03bd6155cda621b9d54de44867d13d91 201 SUPERFAMILY SSF55729 31 193 4.88E-32 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_4224 03bd6155cda621b9d54de44867d13d91 201 Gene3D G3DSA:3.40.630.30 27 198 8.3E-51 T 23-10-2018 DLM_4224 03bd6155cda621b9d54de44867d13d91 201 Pfam PF13420 Acetyltransferase (GNAT) domain 31 182 2.7E-27 T 23-10-2018 DLM_4028 9235558cce1e8afaad0660bd34f49435 358 PIRSF PIRSF001361 1 352 2.4E-163 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DLM_4028 9235558cce1e8afaad0660bd34f49435 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 6.1E-167 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DLM_4028 9235558cce1e8afaad0660bd34f49435 358 Gene3D G3DSA:3.20.20.70 1 350 6.9E-166 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_4028 9235558cce1e8afaad0660bd34f49435 358 SUPERFAMILY SSF51569 7 348 4.19E-139 T 23-10-2018 DLM_4028 9235558cce1e8afaad0660bd34f49435 358 Pfam PF00793 DAHP synthetase I family 44 338 3.0E-106 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DLM_2979 60c790e198b5a667d699e855af158f11 205 SUPERFAMILY SSF54523 7 93 4.47E-5 T 23-10-2018 DLM_2979 60c790e198b5a667d699e855af158f11 205 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 5 167 4.0E-25 T 23-10-2018 IPR013362 Pilus modification type IV, PilV DLM_2979 60c790e198b5a667d699e855af158f11 205 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.2E-6 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_2979 60c790e198b5a667d699e855af158f11 205 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 6.0E-5 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_2724 c3fdcb7cdbc9198d1b98576a6dabe63e 228 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 227 1.7E-72 T 23-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 DLM_2724 c3fdcb7cdbc9198d1b98576a6dabe63e 228 Gene3D G3DSA:1.20.950.20 1 219 7.6E-71 T 23-10-2018 DLM_2724 c3fdcb7cdbc9198d1b98576a6dabe63e 228 SUPERFAMILY SSF103501 1 226 4.05E-61 T 23-10-2018 IPR036197 NarG-like superfamily DLM_2724 c3fdcb7cdbc9198d1b98576a6dabe63e 228 Pfam PF02665 Nitrate reductase gamma subunit 5 227 1.1E-76 T 23-10-2018 IPR023234 NarG-like domain DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 PIRSF PIRSF002560 1 156 1.4E-56 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 PRINTS PR00601 Bacterioferritin signature 129 150 2.8E-43 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 PRINTS PR00601 Bacterioferritin signature 23 43 2.8E-43 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 PRINTS PR00601 Bacterioferritin signature 3 22 2.8E-43 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 PRINTS PR00601 Bacterioferritin signature 86 106 2.8E-43 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 PRINTS PR00601 Bacterioferritin signature 107 127 2.8E-43 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 PRINTS PR00601 Bacterioferritin signature 44 64 2.8E-43 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 PRINTS PR00601 Bacterioferritin signature 65 85 2.8E-43 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 SUPERFAMILY SSF47240 1 155 3.37E-44 T 23-10-2018 IPR009078 Ferritin-like superfamily DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 6.8E-48 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 Pfam PF00210 Ferritin-like domain 8 144 2.2E-33 T 23-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 Gene3D G3DSA:1.20.1260.10 1 155 1.5E-53 T 23-10-2018 IPR012347 Ferritin-like DLM_3421 12dd8b60d4f86739c85de22a6e370b12 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DLM_2748 73886f48ba28897805531ba0f82a1141 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 76 717 1.8E-131 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DLM_2748 73886f48ba28897805531ba0f82a1141 718 SUPERFAMILY SSF56935 30 718 3.21E-138 T 23-10-2018 DLM_2748 73886f48ba28897805531ba0f82a1141 718 Gene3D G3DSA:2.170.130.10 51 189 7.3E-40 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DLM_2748 73886f48ba28897805531ba0f82a1141 718 Gene3D G3DSA:2.40.170.20 190 718 4.4E-124 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_2748 73886f48ba28897805531ba0f82a1141 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 180 7.6E-23 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_2748 73886f48ba28897805531ba0f82a1141 718 Pfam PF00593 TonB dependent receptor 267 717 6.1E-57 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DLM_0683 094741b4a094a4cad4cfb7df999927c9 351 PIRSF PIRSF028756 35 346 6.7E-128 T 23-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 DLM_0683 094741b4a094a4cad4cfb7df999927c9 351 Gene3D G3DSA:3.40.50.300 58 342 3.3E-104 T 23-10-2018 DLM_0683 094741b4a094a4cad4cfb7df999927c9 351 SUPERFAMILY SSF52540 126 313 8.4E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0683 094741b4a094a4cad4cfb7df999927c9 351 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 94 321 8.6E-119 T 23-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 DLM_0683 094741b4a094a4cad4cfb7df999927c9 351 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 95 320 4.6E-110 T 23-10-2018 IPR022488 Polyphosphate kinase-2-related DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 198 352 7.4E-12 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 Gene3D G3DSA:3.40.50.300 197 371 2.7E-39 T 23-10-2018 DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 SUPERFAMILY SSF52540 197 369 4.35E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 Hamap MF_00900 GTPase HflX [hflX]. 27 375 45.687 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 PIRSF PIRSF006809 6 374 2.9E-137 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.6E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 6.6E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 Gene3D G3DSA:3.40.50.11060 19 138 8.4E-39 T 23-10-2018 DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 3.9E-31 T 23-10-2018 IPR025121 GTPase HflX, N-terminal DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.7E-28 T 23-10-2018 IPR032305 GTP-binding protein, middle domain DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.4E-20 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_0575 1c80597c16b1da5b048e3d0055b2f3d3 376 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 1.1E-150 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 DLM_4478 f20a5698cf2ee78e3aca43fe18e5e0ca 300 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_4478 f20a5698cf2ee78e3aca43fe18e5e0ca 300 SMART SM00382 29 209 7.3E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4478 f20a5698cf2ee78e3aca43fe18e5e0ca 300 Pfam PF00005 ABC transporter 20 162 3.5E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4478 f20a5698cf2ee78e3aca43fe18e5e0ca 300 Gene3D G3DSA:3.40.50.300 2 233 6.5E-70 T 23-10-2018 DLM_4478 f20a5698cf2ee78e3aca43fe18e5e0ca 300 SUPERFAMILY SSF52540 4 225 4.26E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0472 76150d95b2f4486138115c7c85b93e99 193 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DLM_0472 76150d95b2f4486138115c7c85b93e99 193 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 183 1.9E-51 T 23-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DLM_0472 76150d95b2f4486138115c7c85b93e99 193 PIRSF PIRSF000847 1 192 5.5E-45 T 23-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DLM_0472 76150d95b2f4486138115c7c85b93e99 193 Gene3D G3DSA:1.20.120.1760 5 184 3.9E-11 T 23-10-2018 DLM_0472 76150d95b2f4486138115c7c85b93e99 193 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 2.7E-13 T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DLM_1464 ff26f6b9ea8e2d753440d9a99cba9c78 118 Pfam PF11964 SpoIIAA-like 13 112 3.8E-11 T 23-10-2018 IPR021866 SpoIIAA-like DLM_1464 ff26f6b9ea8e2d753440d9a99cba9c78 118 Gene3D G3DSA:3.40.50.10600 1 113 2.9E-19 T 23-10-2018 IPR038396 SpoIIAA-like superfamily DLM_1464 ff26f6b9ea8e2d753440d9a99cba9c78 118 SUPERFAMILY SSF52091 1 112 8.63E-25 T 23-10-2018 IPR036513 STAS domain superfamily DLM_1707 4d3b32eddeacae420e9c1334e1195549 540 Pfam PF00890 FAD binding domain 87 465 1.2E-76 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_1707 4d3b32eddeacae420e9c1334e1195549 540 SUPERFAMILY SSF56425 312 426 3.59E-30 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_1707 4d3b32eddeacae420e9c1334e1195549 540 SUPERFAMILY SSF51905 82 488 2.42E-56 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1707 4d3b32eddeacae420e9c1334e1195549 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 429 451 1.6E-10 T 23-10-2018 DLM_1707 4d3b32eddeacae420e9c1334e1195549 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 87 106 1.6E-10 T 23-10-2018 DLM_1707 4d3b32eddeacae420e9c1334e1195549 540 Gene3D G3DSA:3.90.700.10 322 432 6.3E-118 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_1707 4d3b32eddeacae420e9c1334e1195549 540 Gene3D G3DSA:3.50.50.60 87 477 6.3E-118 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3991 8a2e09c112ccd3b152a31edc949e3eea 202 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 3 202 25.944 T 23-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DLM_3991 8a2e09c112ccd3b152a31edc949e3eea 202 Pfam PF02581 Thiamine monophosphate synthase 5 183 1.0E-54 T 23-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DLM_3991 8a2e09c112ccd3b152a31edc949e3eea 202 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 196 2.9E-59 T 23-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DLM_3991 8a2e09c112ccd3b152a31edc949e3eea 202 Gene3D G3DSA:3.20.20.70 2 202 1.9E-61 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3991 8a2e09c112ccd3b152a31edc949e3eea 202 SUPERFAMILY SSF51391 4 200 3.66E-61 T 23-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DLM_4466 1e9324a4284c2962073c8656a5952010 79 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 7 78 1.4E-25 T 23-10-2018 IPR018680 Protein of unknown function DUF2164 DLM_0725 ff2c8c6a7b7eadd990a5e9dc237f739b 346 PIRSF PIRSF000164 12 346 9.3E-95 T 23-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DLM_0725 ff2c8c6a7b7eadd990a5e9dc237f739b 346 Pfam PF01180 Dihydroorotate dehydrogenase 47 339 4.8E-94 T 23-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DLM_0725 ff2c8c6a7b7eadd990a5e9dc237f739b 346 Gene3D G3DSA:3.20.20.70 2 335 6.1E-135 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0725 ff2c8c6a7b7eadd990a5e9dc237f739b 346 SUPERFAMILY SSF51395 1 342 1.69E-103 T 23-10-2018 DLM_0725 ff2c8c6a7b7eadd990a5e9dc237f739b 346 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.451 T 23-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DLM_0725 ff2c8c6a7b7eadd990a5e9dc237f739b 346 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 23-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DLM_0725 ff2c8c6a7b7eadd990a5e9dc237f739b 346 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 23-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DLM_0725 ff2c8c6a7b7eadd990a5e9dc237f739b 346 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 343 1.7E-131 T 23-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DLM_0862 0644e48ec66c1e0ffb50e75c9b90e25c 1603 PIRSF PIRSF036761 2 1602 0.0 T 23-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 DLM_0862 0644e48ec66c1e0ffb50e75c9b90e25c 1603 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1598 0.0 T 23-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 DLM_0862 0644e48ec66c1e0ffb50e75c9b90e25c 1603 SUPERFAMILY SSF51735 945 1281 1.71E-27 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0862 0644e48ec66c1e0ffb50e75c9b90e25c 1603 SUPERFAMILY SSF53223 754 940 8.54E-25 T 23-10-2018 DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 247 2.2E-54 T 23-10-2018 DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.5E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.5E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.5E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.5E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.5E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.5E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 SUPERFAMILY SSF51735 3 247 2.95E-68 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 Gene3D G3DSA:3.40.50.720 2 248 2.8E-72 T 23-10-2018 DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2849 215b2f9cdaac4fb1842e003b57896670 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 SMART SM00138 11 274 7.6E-91 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 PIRSF PIRSF000410 1 275 5.6E-96 T 23-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 79 270 4.4E-55 T 23-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 SUPERFAMILY SSF53335 79 272 2.39E-53 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 1.5E-42 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 PRINTS PR00996 Glutamate methyltransferase family signature 214 228 1.5E-42 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 PRINTS PR00996 Glutamate methyltransferase family signature 33 46 1.5E-42 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 PRINTS PR00996 Glutamate methyltransferase family signature 233 256 1.5E-42 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 1.5E-42 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 1.5E-42 T 23-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 12 63 3.9E-14 T 23-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 Gene3D G3DSA:3.40.50.150 78 274 1.4E-63 T 23-10-2018 DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 Gene3D G3DSA:1.10.155.10 1 77 5.7E-27 T 23-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DLM_2887 15598cb2ea5aab36e266c9ba35223bc2 280 SUPERFAMILY SSF47757 4 78 4.05E-22 T 23-10-2018 DLM_0275 8376a49436d268ec1167d97e3342a314 292 SMART SM00244 22 184 6.7E-32 T 23-10-2018 IPR001107 Band 7 domain DLM_0275 8376a49436d268ec1167d97e3342a314 292 Gene3D G3DSA:3.30.479.30 51 186 5.9E-23 T 23-10-2018 DLM_0275 8376a49436d268ec1167d97e3342a314 292 PRINTS PR00721 Stomatin signature 29 51 3.0E-6 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_0275 8376a49436d268ec1167d97e3342a314 292 PRINTS PR00721 Stomatin signature 179 200 3.0E-6 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_0275 8376a49436d268ec1167d97e3342a314 292 PRINTS PR00721 Stomatin signature 160 178 3.0E-6 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_0275 8376a49436d268ec1167d97e3342a314 292 PRINTS PR00721 Stomatin signature 115 132 3.0E-6 T 23-10-2018 IPR001972 Stomatin family GO:0016020 DLM_0275 8376a49436d268ec1167d97e3342a314 292 PIRSF PIRSF005651 1 292 6.3E-81 T 23-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DLM_0275 8376a49436d268ec1167d97e3342a314 292 Pfam PF01145 SPFH domain / Band 7 family 27 199 5.1E-25 T 23-10-2018 IPR001107 Band 7 domain DLM_0275 8376a49436d268ec1167d97e3342a314 292 SUPERFAMILY SSF117892 54 190 8.76E-22 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily DLM_4174 bf912ea7ac20c506c7f158c16ff13229 286 Gene3D G3DSA:1.10.10.60 183 286 1.1E-25 T 23-10-2018 DLM_4174 bf912ea7ac20c506c7f158c16ff13229 286 SUPERFAMILY SSF46689 183 233 1.57E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_4174 bf912ea7ac20c506c7f158c16ff13229 286 Pfam PF02311 AraC-like ligand binding domain 31 162 2.1E-25 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DLM_4174 bf912ea7ac20c506c7f158c16ff13229 286 SMART SM00342 199 281 3.4E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_4174 bf912ea7ac20c506c7f158c16ff13229 286 Pfam PF12833 Helix-turn-helix domain 205 282 5.4E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_4174 bf912ea7ac20c506c7f158c16ff13229 286 SUPERFAMILY SSF51215 39 166 3.66E-22 T 23-10-2018 IPR037923 Transcription regulator HTH-like DLM_4174 bf912ea7ac20c506c7f158c16ff13229 286 SUPERFAMILY SSF46689 235 284 1.65E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3549 e1c2ee63610353c627856d42fd68dbf2 403 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 13 271 1.1E-73 T 23-10-2018 IPR017039 Virulence factor BrkB DLM_3549 e1c2ee63610353c627856d42fd68dbf2 403 Pfam PF03631 Virulence factor BrkB 23 270 2.0E-53 T 23-10-2018 IPR017039 Virulence factor BrkB DLM_3549 e1c2ee63610353c627856d42fd68dbf2 403 Pfam PF02082 Transcriptional regulator 286 359 1.5E-4 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type DLM_3549 e1c2ee63610353c627856d42fd68dbf2 403 Gene3D G3DSA:1.10.10.10 280 403 5.1E-5 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3549 e1c2ee63610353c627856d42fd68dbf2 403 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 299 22.191 T 23-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial DLM_2995 42c374c568edac35e162eb6986633da5 280 SUPERFAMILY SSF56784 75 278 3.53E-52 T 23-10-2018 IPR036412 HAD-like superfamily DLM_2995 42c374c568edac35e162eb6986633da5 280 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 75 244 7.9E-34 T 23-10-2018 DLM_2995 42c374c568edac35e162eb6986633da5 280 Pfam PF13284 Domain of unknown function (DUF4072) 5 50 8.9E-11 T 23-10-2018 IPR025138 Domain of unknown function DUF4072 DLM_2995 42c374c568edac35e162eb6986633da5 280 Gene3D G3DSA:3.40.50.1000 18 279 1.2E-74 T 23-10-2018 IPR023214 HAD superfamily DLM_2995 42c374c568edac35e162eb6986633da5 280 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 71 276 1.6E-71 T 23-10-2018 DLM_2995 42c374c568edac35e162eb6986633da5 280 Pfam PF12710 haloacid dehalogenase-like hydrolase 77 244 1.1E-21 T 23-10-2018 DLM_0058 e217e99b01d9794fb42929402a634b8e 214 Gene3D G3DSA:1.20.120.1200 4 167 9.8E-44 T 23-10-2018 DLM_0058 e217e99b01d9794fb42929402a634b8e 214 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 163 2.2E-37 T 23-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3965 4cb4e2d4e9548e69840d5bf7dbaa573e 658 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DLM_3965 4cb4e2d4e9548e69840d5bf7dbaa573e 658 Pfam PF12392 Collagenase 397 511 1.5E-22 T 23-10-2018 IPR020988 Peptidase U32, collagenase DLM_3965 4cb4e2d4e9548e69840d5bf7dbaa573e 658 Pfam PF01136 Peptidase family U32 78 306 5.0E-67 T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DLM_1439 25f9a0d53cba66e56d36e763c3fb8e9e 318 Gene3D G3DSA:2.50.20.10 22 198 6.7E-42 T 23-10-2018 DLM_1439 25f9a0d53cba66e56d36e763c3fb8e9e 318 Pfam PF17188 MucB/RseB C-terminal domain 223 311 9.8E-19 T 23-10-2018 IPR033436 MucB/RseB, C-terminal DLM_1439 25f9a0d53cba66e56d36e763c3fb8e9e 318 PIRSF PIRSF005427 1 317 3.3E-83 T 23-10-2018 IPR005588 MucB/RseB DLM_1439 25f9a0d53cba66e56d36e763c3fb8e9e 318 Gene3D G3DSA:3.30.200.100 218 316 9.7E-18 T 23-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily DLM_1439 25f9a0d53cba66e56d36e763c3fb8e9e 318 SUPERFAMILY SSF89392 77 199 1.1E-5 T 23-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DLM_1439 25f9a0d53cba66e56d36e763c3fb8e9e 318 Pfam PF03888 MucB/RseB N-terminal domain 28 198 2.6E-41 T 23-10-2018 IPR033434 MucB/RseB, N-terminal DLM_3857 890b50e0b6448ed292e0b33e26d24c3b 338 SUPERFAMILY SSF53335 14 324 3.19E-52 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3857 890b50e0b6448ed292e0b33e26d24c3b 338 Gene3D G3DSA:3.30.750.80 4 106 6.5E-11 T 23-10-2018 DLM_3857 890b50e0b6448ed292e0b33e26d24c3b 338 Gene3D G3DSA:3.40.50.150 111 338 1.8E-48 T 23-10-2018 DLM_3857 890b50e0b6448ed292e0b33e26d24c3b 338 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 32 198 1.5E-23 T 23-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DLM_3857 890b50e0b6448ed292e0b33e26d24c3b 338 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 238 335 7.3E-5 T 23-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DLM_0919 e4e457785bc72808a5a7d572431aa7e6 134 Gene3D G3DSA:3.10.450.50 4 125 6.5E-18 T 23-10-2018 DLM_0919 e4e457785bc72808a5a7d572431aa7e6 134 SUPERFAMILY SSF54427 5 121 1.14E-16 T 23-10-2018 IPR032710 NTF2-like domain superfamily DLM_0919 e4e457785bc72808a5a7d572431aa7e6 134 Pfam PF12680 SnoaL-like domain 14 112 1.6E-9 T 23-10-2018 IPR037401 SnoaL-like domain DLM_3510 1d65e4119cab42cc76a615ab3bb5265b 116 Gene3D G3DSA:1.10.260.40 13 112 2.8E-15 T 23-10-2018 DLM_3510 1d65e4119cab42cc76a615ab3bb5265b 116 SUPERFAMILY SSF47413 11 75 2.95E-14 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_3510 1d65e4119cab42cc76a615ab3bb5265b 116 Pfam PF01381 Helix-turn-helix 17 68 5.5E-12 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_3510 1d65e4119cab42cc76a615ab3bb5265b 116 SMART SM00530 16 71 1.5E-11 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_1622 1d65e4119cab42cc76a615ab3bb5265b 116 Gene3D G3DSA:1.10.260.40 13 112 2.8E-15 T 23-10-2018 DLM_1622 1d65e4119cab42cc76a615ab3bb5265b 116 SUPERFAMILY SSF47413 11 75 2.95E-14 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_1622 1d65e4119cab42cc76a615ab3bb5265b 116 Pfam PF01381 Helix-turn-helix 17 68 5.5E-12 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_1622 1d65e4119cab42cc76a615ab3bb5265b 116 SMART SM00530 16 71 1.5E-11 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2060 dfe64e57689c988d6e61911f7d98c6ea 403 SUPERFAMILY SSF55031 196 309 1.7E-32 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DLM_2060 dfe64e57689c988d6e61911f7d98c6ea 403 PIRSF PIRSF005962 13 400 3.4E-123 T 23-10-2018 IPR017439 Amidohydrolase GO:0016787 DLM_2060 dfe64e57689c988d6e61911f7d98c6ea 403 Pfam PF07687 Peptidase dimerisation domain 198 291 8.1E-12 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain DLM_2060 dfe64e57689c988d6e61911f7d98c6ea 403 Pfam PF01546 Peptidase family M20/M25/M40 86 393 2.5E-37 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 DLM_2060 dfe64e57689c988d6e61911f7d98c6ea 403 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 28 384 1.2E-110 T 23-10-2018 IPR017439 Amidohydrolase GO:0016787 DLM_2060 dfe64e57689c988d6e61911f7d98c6ea 403 Gene3D G3DSA:3.30.70.360 194 308 4.4E-139 T 23-10-2018 DLM_2060 dfe64e57689c988d6e61911f7d98c6ea 403 SUPERFAMILY SSF53187 20 396 8.75E-88 T 23-10-2018 DLM_2060 dfe64e57689c988d6e61911f7d98c6ea 403 Gene3D G3DSA:3.40.630.10 28 381 4.4E-139 T 23-10-2018 DLM_4393 5f1eac1489028e10f24ff8fdac43e791 102 SUPERFAMILY SSF54189 1 92 8.27E-33 T 23-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4393 5f1eac1489028e10f24ff8fdac43e791 102 Gene3D G3DSA:3.30.70.330 1 98 6.3E-36 T 23-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DLM_4393 5f1eac1489028e10f24ff8fdac43e791 102 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 23.467 T 23-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DLM_4393 5f1eac1489028e10f24ff8fdac43e791 102 Pfam PF00276 Ribosomal protein L23 8 93 2.8E-33 T 23-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DLM_2012 8e5338e4361087f33396293cc4781ae4 440 Gene3D G3DSA:1.20.1600.10 21 440 1.3E-64 T 23-10-2018 DLM_2012 8e5338e4361087f33396293cc4781ae4 440 SUPERFAMILY SSF56954 6 440 4.19E-66 T 23-10-2018 DLM_2012 8e5338e4361087f33396293cc4781ae4 440 Pfam PF02321 Outer membrane efflux protein 261 438 4.4E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_2012 8e5338e4361087f33396293cc4781ae4 440 Pfam PF02321 Outer membrane efflux protein 26 235 1.6E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 SUPERFAMILY SSF47203 231 386 1.61E-45 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 384 6.2E-40 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 221 1.1E-24 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 Gene3D G3DSA:1.10.540.10 2 124 9.7E-47 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 SUPERFAMILY SSF56645 6 246 3.01E-87 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 Gene3D G3DSA:1.20.140.10 238 387 8.4E-46 T 23-10-2018 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 122 8.1E-38 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_0700 6dd4697a370b4522baf7b249fc96ea7c 389 Gene3D G3DSA:2.40.110.10 125 237 6.4E-45 T 23-10-2018 DLM_2003 db8dc8c5ea59e42b9cf2ab99a11e9caf 206 Pfam PF00677 Lumazine binding domain 100 184 1.2E-18 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2003 db8dc8c5ea59e42b9cf2ab99a11e9caf 206 Pfam PF00677 Lumazine binding domain 3 87 1.6E-23 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2003 db8dc8c5ea59e42b9cf2ab99a11e9caf 206 SUPERFAMILY SSF63380 93 198 2.98E-29 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_2003 db8dc8c5ea59e42b9cf2ab99a11e9caf 206 SUPERFAMILY SSF63380 1 93 1.62E-28 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_2003 db8dc8c5ea59e42b9cf2ab99a11e9caf 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 2.1E-74 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2003 db8dc8c5ea59e42b9cf2ab99a11e9caf 206 Gene3D G3DSA:2.40.30.20 1 89 1.6E-32 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_2003 db8dc8c5ea59e42b9cf2ab99a11e9caf 206 PIRSF PIRSF000498 1 206 9.9E-69 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_2003 db8dc8c5ea59e42b9cf2ab99a11e9caf 206 Gene3D G3DSA:2.40.30.20 94 190 5.4E-27 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DLM_4272 7ba1444ed99cd15b5a2f3565b748d839 221 Gene3D G3DSA:3.40.50.150 4 221 2.0E-72 T 23-10-2018 DLM_4272 7ba1444ed99cd15b5a2f3565b748d839 221 Pfam PF01596 O-methyltransferase 22 220 4.9E-69 T 23-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 DLM_4272 7ba1444ed99cd15b5a2f3565b748d839 221 SUPERFAMILY SSF53335 23 220 5.57E-48 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0727 621391f8346c5a92d2724b27874201aa 275 Gene3D G3DSA:3.30.1330.60 98 251 1.4E-45 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_0727 621391f8346c5a92d2724b27874201aa 275 SUPERFAMILY SSF103088 129 245 3.66E-31 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_0727 621391f8346c5a92d2724b27874201aa 275 Pfam PF00691 OmpA family 142 239 9.9E-20 T 23-10-2018 IPR006665 OmpA-like domain DLM_0727 621391f8346c5a92d2724b27874201aa 275 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 58 4.9E-22 T 23-10-2018 IPR025713 Motility protein B, N-terminal domain DLM_1323 1084c2afe45d86e61b06389744252541 255 Gene3D G3DSA:3.40.190.10 110 210 3.7E-11 T 23-10-2018 DLM_1323 1084c2afe45d86e61b06389744252541 255 SUPERFAMILY SSF53850 42 250 2.06E-15 T 23-10-2018 DLM_1323 1084c2afe45d86e61b06389744252541 255 Gene3D G3DSA:3.40.190.10 43 249 3.7E-11 T 23-10-2018 DLM_1323 1084c2afe45d86e61b06389744252541 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 250 3.2E-11 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1720 37eb9e30bb09168ab78d34c7a88fbe3c 287 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 14 283 3.0E-111 T 23-10-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 DLM_1720 37eb9e30bb09168ab78d34c7a88fbe3c 287 Pfam PF01039 Carboxyl transferase domain 19 205 2.8E-11 T 23-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DLM_1720 37eb9e30bb09168ab78d34c7a88fbe3c 287 SUPERFAMILY SSF52096 6 237 5.1E-38 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_1720 37eb9e30bb09168ab78d34c7a88fbe3c 287 Gene3D G3DSA:3.90.226.10 2 243 7.0E-49 T 23-10-2018 DLM_0088 c756c05e576b12f31ffb9060db82cf8c 164 Gene3D G3DSA:3.40.50.300 7 158 3.3E-46 T 23-10-2018 DLM_0088 c756c05e576b12f31ffb9060db82cf8c 164 SUPERFAMILY SSF52540 30 150 1.01E-22 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0088 c756c05e576b12f31ffb9060db82cf8c 164 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 14 134 3.2E-38 T 23-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DLM_0088 c756c05e576b12f31ffb9060db82cf8c 164 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 13 144 1.8E-43 T 23-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DLM_4403 4279cbd0cbd0e476b0b6cbfd949672a8 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 23-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4403 4279cbd0cbd0e476b0b6cbfd949672a8 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 19.739 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4403 4279cbd0cbd0e476b0b6cbfd949672a8 104 SMART SM00739 3 30 9.1E-6 T 23-10-2018 IPR005824 KOW DLM_4403 4279cbd0cbd0e476b0b6cbfd949672a8 104 Gene3D G3DSA:2.30.30.30 1 103 4.1E-35 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 DLM_4403 4279cbd0cbd0e476b0b6cbfd949672a8 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 102 2.5E-36 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4403 4279cbd0cbd0e476b0b6cbfd949672a8 104 SUPERFAMILY SSF50104 3 101 3.07E-30 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily DLM_4403 4279cbd0cbd0e476b0b6cbfd949672a8 104 Pfam PF00467 KOW motif 6 33 1.2E-5 T 23-10-2018 IPR005824 KOW DLM_4403 4279cbd0cbd0e476b0b6cbfd949672a8 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 102 3.8E-23 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 SUPERFAMILY SSF46785 10 83 1.2E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 Gene3D G3DSA:3.40.1410.10 101 244 1.5E-28 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 SMART SM00345 21 80 1.4E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 Pfam PF07702 UTRA domain 104 239 3.9E-28 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 5.3E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 Gene3D G3DSA:1.10.10.10 16 83 4.0E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 2.0E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 2.0E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 SUPERFAMILY SSF64288 68 239 1.52E-28 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DLM_0347 9cc24df9b3fabd0b741b015b5a143b0a 250 SMART SM00866 100 244 2.3E-16 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DLM_2522 c9d8fb474b2f453545159582a533338c 151 Pfam PF05232 Chlorhexidine efflux transporter 9 70 1.8E-22 T 23-10-2018 IPR007896 Chlorhexidine efflux transporter DLM_2522 c9d8fb474b2f453545159582a533338c 151 Pfam PF05232 Chlorhexidine efflux transporter 75 138 3.5E-25 T 23-10-2018 IPR007896 Chlorhexidine efflux transporter DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 590 8.4E-148 T 23-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 Gene3D G3DSA:3.30.70.3400 123 202 4.8E-5 T 23-10-2018 DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 Pfam PF13721 SecD export protein N-terminal TM region 1 103 5.3E-39 T 23-10-2018 IPR027398 SecD export protein N-terminal TM domain DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 604 47.726 T 23-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 Pfam PF02355 Protein export membrane protein 423 593 7.9E-21 T 23-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 Gene3D G3DSA:3.30.70.3400 219 427 1.2E-56 T 23-10-2018 DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 349 583 2.3E-74 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 Gene3D G3DSA:1.20.1640.10 443 593 2.9E-7 T 23-10-2018 DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 Gene3D G3DSA:3.30.1360.200 278 421 1.2E-56 T 23-10-2018 DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 Pfam PF07549 SecD/SecF GG Motif 123 141 1.1E-4 T 23-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DLM_2410 eb9bdbc42bf17e9589a08c7a9b0c8429 613 SUPERFAMILY SSF82866 338 598 9.02E-40 T 23-10-2018 DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 SUPERFAMILY SSF52540 4 247 2.13E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 SMART SM00382 29 226 3.5E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 SMART SM00382 303 495 9.8E-19 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 SUPERFAMILY SSF52540 271 517 7.77E-69 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 Pfam PF00005 ABC transporter 20 176 2.0E-25 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 497 521 0.0016 T 23-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 228 255 1.1E-4 T 23-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 Pfam PF00005 ABC transporter 295 446 1.4E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 Gene3D G3DSA:3.40.50.300 2 267 1.0E-78 T 23-10-2018 DLM_0636 d6c1e5558e887f2cc662a2a27820be4a 525 Gene3D G3DSA:3.40.50.300 268 524 6.8E-86 T 23-10-2018 DLM_1513 e562a61a9f91ecb95678b8bd3c9c0a5a 72 SUPERFAMILY SSF50331 6 70 4.13E-16 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DLM_1513 e562a61a9f91ecb95678b8bd3c9c0a5a 72 Pfam PF03459 TOBE domain 8 67 1.9E-15 T 23-10-2018 IPR005116 Transport-associated OB, type 1 DLM_1513 e562a61a9f91ecb95678b8bd3c9c0a5a 72 Gene3D G3DSA:2.40.50.100 5 69 2.4E-20 T 23-10-2018 DLM_1513 e562a61a9f91ecb95678b8bd3c9c0a5a 72 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 6 69 2.6E-17 T 23-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 DLM_1232 8dfcb6421ba608251b45952284092803 640 SMART SM00283 369 637 2.7E-22 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1232 8dfcb6421ba608251b45952284092803 640 SMART SM00283 69 337 4.8E-48 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1232 8dfcb6421ba608251b45952284092803 640 Gene3D G3DSA:1.10.287.950 340 640 1.6E-44 T 23-10-2018 DLM_1232 8dfcb6421ba608251b45952284092803 640 Gene3D G3DSA:1.10.287.950 36 339 2.9E-53 T 23-10-2018 DLM_1232 8dfcb6421ba608251b45952284092803 640 SUPERFAMILY SSF58104 355 637 1.24E-45 T 23-10-2018 DLM_1232 8dfcb6421ba608251b45952284092803 640 SUPERFAMILY SSF58104 53 340 1.4E-50 T 23-10-2018 DLM_1232 8dfcb6421ba608251b45952284092803 640 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 148 295 2.1E-33 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1232 8dfcb6421ba608251b45952284092803 640 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 441 566 6.1E-25 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2565 a29f4e2ed92915f5eb0581f2001d7d5b 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 334 2.3E-118 T 23-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 DLM_2565 a29f4e2ed92915f5eb0581f2001d7d5b 339 Gene3D G3DSA:2.40.40.20 272 337 2.1E-5 T 23-10-2018 DLM_2565 a29f4e2ed92915f5eb0581f2001d7d5b 339 SUPERFAMILY SSF55729 1 336 9.53E-106 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_2565 a29f4e2ed92915f5eb0581f2001d7d5b 339 Gene3D G3DSA:3.40.630.30 1 270 1.4E-101 T 23-10-2018 DLM_2565 a29f4e2ed92915f5eb0581f2001d7d5b 339 TIGRFAM TIGR03245 arg_AOST_alph: arginine/ornithine succinyltransferase, alpha subunit 3 336 2.5E-156 T 23-10-2018 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit KEGG: 00330+2.3.1.109 DLM_2565 a29f4e2ed92915f5eb0581f2001d7d5b 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 335 2.1E-131 T 23-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 DLM_2530 2bef8b040e8a896d8d6513b9cf1f0a89 86 Pfam PF01381 Helix-turn-helix 21 71 1.7E-8 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2530 2bef8b040e8a896d8d6513b9cf1f0a89 86 SUPERFAMILY SSF47413 15 77 3.49E-12 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_2530 2bef8b040e8a896d8d6513b9cf1f0a89 86 SMART SM00530 20 75 2.6E-7 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2530 2bef8b040e8a896d8d6513b9cf1f0a89 86 Gene3D G3DSA:1.10.260.40 7 80 3.4E-24 T 23-10-2018 DLM_3704 83f20872d1cf2ec7ceec9db6adfe6ab8 106 SUPERFAMILY SSF101386 4 93 2.62E-25 T 23-10-2018 DLM_3704 83f20872d1cf2ec7ceec9db6adfe6ab8 106 Gene3D G3DSA:1.10.287.1080 2 94 2.4E-31 T 23-10-2018 DLM_3704 83f20872d1cf2ec7ceec9db6adfe6ab8 106 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 6 89 5.5E-32 T 23-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DLM_3704 83f20872d1cf2ec7ceec9db6adfe6ab8 106 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 92 4.2E-19 T 23-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DLM_3704 83f20872d1cf2ec7ceec9db6adfe6ab8 106 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 3 89 21.531 T 23-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DLM_3548 ffba59ac90ad5f2cf4e0806e940575fb 272 Pfam PF11227 Protein of unknown function (DUF3025) 61 263 2.0E-77 T 23-10-2018 IPR021390 Protein of unknown function DUF3025 DLM_2176 f4794535eaa071a5655a7586294b1236 504 Gene3D G3DSA:2.60.40.10 387 504 1.9E-29 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_2176 f4794535eaa071a5655a7586294b1236 504 Pfam PF12801 4Fe-4S binding domain 122 160 3.4E-10 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_2176 f4794535eaa071a5655a7586294b1236 504 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 299 310 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_2176 f4794535eaa071a5655a7586294b1236 504 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 389 503 3.9E-29 T 23-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain DLM_2176 f4794535eaa071a5655a7586294b1236 504 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 68 503 1.4E-149 T 23-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 DLM_2176 f4794535eaa071a5655a7586294b1236 504 SUPERFAMILY SSF54862 132 363 1.47E-31 T 23-10-2018 DLM_2176 f4794535eaa071a5655a7586294b1236 504 Pfam PF13746 4Fe-4S dicluster domain 246 351 1.0E-42 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_1094 caea43fa8befbac09f583f9dfab099b3 89 SUPERFAMILY SSF47729 1 89 1.38E-31 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_1094 caea43fa8befbac09f583f9dfab099b3 89 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.9E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1094 caea43fa8befbac09f583f9dfab099b3 89 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.9E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1094 caea43fa8befbac09f583f9dfab099b3 89 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.9E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1094 caea43fa8befbac09f583f9dfab099b3 89 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DLM_1094 caea43fa8befbac09f583f9dfab099b3 89 SMART SM00411 1 89 2.3E-37 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_1094 caea43fa8befbac09f583f9dfab099b3 89 Gene3D G3DSA:4.10.520.10 1 89 5.3E-35 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_1094 caea43fa8befbac09f583f9dfab099b3 89 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.6E-33 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0230 5a5e10472131144f4adbaa51830b3f9e 159 Pfam PF04306 Protein of unknown function (DUF456) 21 156 5.0E-36 T 23-10-2018 IPR007403 Protein of unknown function DUF456 DLM_4132 5f8bd291bc2c36ba3845e8866f953490 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 226 1.0E-46 T 23-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_4132 5f8bd291bc2c36ba3845e8866f953490 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 37 231 8.4E-38 T 23-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 DLM_4132 5f8bd291bc2c36ba3845e8866f953490 232 SUPERFAMILY SSF53681 120 229 7.36E-25 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_4132 5f8bd291bc2c36ba3845e8866f953490 232 Gene3D G3DSA:3.40.50.1860 106 217 8.8E-53 T 23-10-2018 DLM_4132 5f8bd291bc2c36ba3845e8866f953490 232 SUPERFAMILY SSF53681 8 118 6.1E-13 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DLM_4132 5f8bd291bc2c36ba3845e8866f953490 232 Gene3D G3DSA:3.40.50.1860 8 224 8.8E-53 T 23-10-2018 DLM_4324 35cea446e519411a26af6ee80b2515c7 98 Gene3D G3DSA:3.30.1200.10 3 97 1.9E-28 T 23-10-2018 IPR036591 YggU-like superfamily DLM_4324 35cea446e519411a26af6ee80b2515c7 98 SUPERFAMILY SSF69786 3 85 7.59E-27 T 23-10-2018 IPR036591 YggU-like superfamily DLM_4324 35cea446e519411a26af6ee80b2515c7 98 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 19.404 T 23-10-2018 IPR003746 Protein of unknown function DUF167 DLM_4324 35cea446e519411a26af6ee80b2515c7 98 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 1.1E-25 T 23-10-2018 IPR003746 Protein of unknown function DUF167 DLM_4324 35cea446e519411a26af6ee80b2515c7 98 SMART SM01152 8 84 7.0E-34 T 23-10-2018 IPR003746 Protein of unknown function DUF167 DLM_3846 7c40e4d185c07f4903c2e72652c5829b 240 SUPERFAMILY SSF141488 158 234 1.7E-9 T 23-10-2018 IPR036328 C-type lysozyme inhibitor superfamily DLM_3846 7c40e4d185c07f4903c2e72652c5829b 240 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 164 230 1.6E-4 T 23-10-2018 IPR018660 C-type lysozyme inhibitor DLM_3846 7c40e4d185c07f4903c2e72652c5829b 240 Gene3D G3DSA:2.40.128.200 160 238 4.7E-8 T 23-10-2018 IPR036328 C-type lysozyme inhibitor superfamily DLM_2517 84d2c7b00085b38ac3cefdb88e26f525 433 Pfam PF08022 FAD-binding domain 221 307 1.7E-7 T 23-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 DLM_2517 84d2c7b00085b38ac3cefdb88e26f525 433 Gene3D G3DSA:3.40.50.80 318 430 2.3E-17 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_2517 84d2c7b00085b38ac3cefdb88e26f525 433 SUPERFAMILY SSF63380 218 310 3.05E-19 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_2517 84d2c7b00085b38ac3cefdb88e26f525 433 Gene3D G3DSA:2.40.30.10 210 307 3.1E-13 T 23-10-2018 DLM_2517 84d2c7b00085b38ac3cefdb88e26f525 433 SUPERFAMILY SSF52343 319 430 1.17E-18 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_2517 84d2c7b00085b38ac3cefdb88e26f525 433 Pfam PF01794 Ferric reductase like transmembrane component 52 172 6.0E-13 T 23-10-2018 IPR013130 Ferric reductase transmembrane component-like domain DLM_2465 1eb6fa5a662d123e2a328d113331c378 214 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 42.83 T 23-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DLM_2465 1eb6fa5a662d123e2a328d113331c378 214 Gene3D G3DSA:3.20.19.10 1 184 6.4E-76 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DLM_2465 1eb6fa5a662d123e2a328d113331c378 214 Pfam PF00694 Aconitase C-terminal domain 1 132 6.1E-35 T 23-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DLM_2465 1eb6fa5a662d123e2a328d113331c378 214 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 2.0E-81 T 23-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DLM_2465 1eb6fa5a662d123e2a328d113331c378 214 SUPERFAMILY SSF52016 1 205 6.28E-62 T 23-10-2018 DLM_4463 a95691f7a81b8ae96ea65de31ee54c51 256 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 32 248 5.3E-41 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_4463 a95691f7a81b8ae96ea65de31ee54c51 256 SUPERFAMILY SSF53254 31 253 1.57E-52 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_4463 a95691f7a81b8ae96ea65de31ee54c51 256 SMART SM00855 31 212 2.5E-20 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DLM_4463 a95691f7a81b8ae96ea65de31ee54c51 256 Gene3D G3DSA:3.40.50.1240 21 255 1.9E-61 T 23-10-2018 IPR029033 Histidine phosphatase superfamily DLM_1528 add7d681a2404371e9e120faea784231 225 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 10 212 40.052 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_1528 add7d681a2404371e9e120faea784231 225 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 12 208 1.6E-74 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_1528 add7d681a2404371e9e120faea784231 225 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 16 207 1.2E-85 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DLM_1528 add7d681a2404371e9e120faea784231 225 Gene3D G3DSA:3.90.870.10 2 215 3.7E-92 T 23-10-2018 DLM_1528 add7d681a2404371e9e120faea784231 225 SUPERFAMILY SSF55821 10 212 3.43E-83 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DLM_0644 4138a0b87dab11f8fb1101badb03dab1 126 SUPERFAMILY SSF161084 4 120 2.09E-21 T 23-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DLM_0644 4138a0b87dab11f8fb1101badb03dab1 126 Gene3D G3DSA:1.20.120.550 2 122 2.8E-16 T 23-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DLM_0644 4138a0b87dab11f8fb1101badb03dab1 126 Pfam PF01124 MAPEG family 4 122 1.6E-20 T 23-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein DLM_4524 ca0cba077d6d8a4386bfb5016d2d71c4 144 Gene3D G3DSA:3.10.580.10 1 143 4.2E-45 T 23-10-2018 DLM_4524 ca0cba077d6d8a4386bfb5016d2d71c4 144 SMART SM00116 15 62 8.1E-9 T 23-10-2018 IPR000644 CBS domain DLM_4524 ca0cba077d6d8a4386bfb5016d2d71c4 144 SMART SM00116 80 127 0.0038 T 23-10-2018 IPR000644 CBS domain DLM_4524 ca0cba077d6d8a4386bfb5016d2d71c4 144 SUPERFAMILY SSF54631 16 142 4.93E-32 T 23-10-2018 DLM_4524 ca0cba077d6d8a4386bfb5016d2d71c4 144 Pfam PF00571 CBS domain 73 125 3.2E-10 T 23-10-2018 IPR000644 CBS domain DLM_4524 ca0cba077d6d8a4386bfb5016d2d71c4 144 Pfam PF00571 CBS domain 16 62 4.5E-10 T 23-10-2018 IPR000644 CBS domain DLM_3629 14def522634c361abe5479a03276db10 445 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_3629 14def522634c361abe5479a03276db10 445 SUPERFAMILY SSF103473 24 435 1.15E-64 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3629 14def522634c361abe5479a03276db10 445 Pfam PF00083 Sugar (and other) transporter 241 438 1.6E-6 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DLM_3629 14def522634c361abe5479a03276db10 445 Pfam PF00083 Sugar (and other) transporter 29 236 1.1E-31 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DLM_3629 14def522634c361abe5479a03276db10 445 Gene3D G3DSA:1.20.1250.20 24 445 1.3E-64 T 23-10-2018 DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 SUPERFAMILY SSF46689 263 312 7.43E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 SUPERFAMILY SSF52317 6 191 8.28E-43 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 SMART SM00342 226 309 1.3E-27 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 Pfam PF01965 DJ-1/PfpI family 40 170 8.1E-11 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 305 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 Pfam PF12833 Helix-turn-helix domain 232 310 2.0E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 Gene3D G3DSA:3.40.50.880 5 203 2.1E-49 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 SUPERFAMILY SSF46689 209 260 9.86E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2931 222a41445215bfbe43ddbf2c7e52a739 313 Gene3D G3DSA:1.10.10.60 206 313 1.2E-26 T 23-10-2018 DLM_1418 4268382bcaec4f0287104264a737b8e8 330 Pfam PF09084 NMT1/THI5 like 57 247 2.0E-20 T 23-10-2018 IPR015168 SsuA/THI5-like DLM_1418 4268382bcaec4f0287104264a737b8e8 330 Gene3D G3DSA:1.10.8.450 240 283 1.5E-47 T 23-10-2018 DLM_1418 4268382bcaec4f0287104264a737b8e8 330 Gene3D G3DSA:3.40.190.10 107 204 1.5E-47 T 23-10-2018 DLM_1418 4268382bcaec4f0287104264a737b8e8 330 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 30 327 6.0E-128 T 23-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 DLM_1418 4268382bcaec4f0287104264a737b8e8 330 Gene3D G3DSA:3.40.190.10 31 308 1.5E-47 T 23-10-2018 DLM_1418 4268382bcaec4f0287104264a737b8e8 330 SUPERFAMILY SSF53850 28 250 6.6E-42 T 23-10-2018 DLM_1418 4268382bcaec4f0287104264a737b8e8 330 SMART SM00062 29 246 1.6E-8 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1185 9a90e8c78fbcb7a6d9733a18b24b6f2c 223 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 213 9.8E-54 T 23-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain DLM_3989 54fb02322fa207263bb9738198ecbdcb 328 Pfam PF12706 Beta-lactamase superfamily domain 83 277 1.7E-15 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3989 54fb02322fa207263bb9738198ecbdcb 328 Gene3D G3DSA:3.60.15.10 37 322 7.8E-54 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3989 54fb02322fa207263bb9738198ecbdcb 328 SUPERFAMILY SSF56281 37 311 1.23E-48 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3989 54fb02322fa207263bb9738198ecbdcb 328 SMART SM00849 53 253 6.6E-6 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_4199 3af0a08d9d50e032f2e6379831ec3cfd 241 Pfam PF08478 POTRA domain, FtsQ-type 37 106 4.8E-20 T 23-10-2018 IPR013685 POTRA domain, FtsQ-type DLM_4199 3af0a08d9d50e032f2e6379831ec3cfd 241 Gene3D G3DSA:3.40.50.11690 107 233 8.9E-34 T 23-10-2018 DLM_4199 3af0a08d9d50e032f2e6379831ec3cfd 241 Gene3D G3DSA:3.10.20.310 36 106 5.4E-22 T 23-10-2018 DLM_4199 3af0a08d9d50e032f2e6379831ec3cfd 241 Pfam PF03799 Cell division protein FtsQ 110 220 4.1E-20 T 23-10-2018 IPR005548 Cell division protein FtsQ/DivIB DLM_4199 3af0a08d9d50e032f2e6379831ec3cfd 241 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 228 22.261 T 23-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 DLM_0571 9c14a3ab0a1d0a34daaa12bd33ef027a 209 SUPERFAMILY SSF48452 90 189 3.8E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_0571 9c14a3ab0a1d0a34daaa12bd33ef027a 209 Pfam PF09976 Tetratricopeptide repeat-like domain 15 208 3.5E-57 T 23-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 DLM_0571 9c14a3ab0a1d0a34daaa12bd33ef027a 209 Gene3D G3DSA:1.25.40.10 89 206 8.1E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_0571 9c14a3ab0a1d0a34daaa12bd33ef027a 209 PIRSF PIRSF006170 1 209 1.3E-50 T 23-10-2018 IPR026039 Uncharacterised protein family UPF0070 DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 Gene3D G3DSA:1.10.10.10 497 557 1.1E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 Gene3D G3DSA:2.40.30.10 173 288 6.4E-23 T 23-10-2018 DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 618 1.2E-171 T 23-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 SUPERFAMILY SSF50465 278 350 1.19E-9 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 Gene3D G3DSA:3.40.50.300 1 168 2.6E-44 T 23-10-2018 DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 Gene3D G3DSA:1.10.10.10 559 618 1.0E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 SUPERFAMILY SSF46785 567 618 6.33E-12 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 Pfam PF09106 Elongation factor SelB, winged helix 435 490 3.3E-12 T 23-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 Pfam PF00009 Elongation factor Tu GTP binding domain 3 166 1.5E-28 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 SUPERFAMILY SSF46785 425 493 1.33E-10 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 SUPERFAMILY SSF46785 498 557 8.16E-5 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 Pfam PF09107 Elongation factor SelB, winged helix 572 616 4.7E-17 T 23-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 SUPERFAMILY SSF50447 176 295 8.62E-20 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DLM_0199 eada43481c92fe10d89107cf3c2e4660 637 SUPERFAMILY SSF52540 2 190 6.47E-40 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1853 09c0a227c86b47f7a34b6d6becdbcdfa 445 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 244 259 - T 23-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DLM_1853 09c0a227c86b47f7a34b6d6becdbcdfa 445 SMART SM01230 108 364 4.9E-106 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1853 09c0a227c86b47f7a34b6d6becdbcdfa 445 Gene3D G3DSA:3.30.590.10 111 442 5.0E-101 T 23-10-2018 DLM_1853 09c0a227c86b47f7a34b6d6becdbcdfa 445 Gene3D G3DSA:3.10.20.70 1 108 1.2E-7 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1853 09c0a227c86b47f7a34b6d6becdbcdfa 445 Pfam PF00120 Glutamine synthetase, catalytic domain 110 440 9.5E-105 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1853 09c0a227c86b47f7a34b6d6becdbcdfa 445 SUPERFAMILY SSF54368 2 107 2.35E-21 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_1853 09c0a227c86b47f7a34b6d6becdbcdfa 445 SUPERFAMILY SSF55931 109 440 4.9E-106 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 Gene3D G3DSA:3.30.1330.30 18 99 3.1E-22 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 Pfam PF00588 SpoU rRNA Methylase family 119 258 1.2E-37 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 27 265 3.1E-72 T 23-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 28 102 5.9E-20 T 23-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 SUPERFAMILY SSF55315 20 99 1.04E-19 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 26 266 42.002 T 23-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 SUPERFAMILY SSF75217 109 266 4.32E-48 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 Gene3D G3DSA:3.40.1280.10 100 266 2.6E-57 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DLM_3131 019765813e8d21025ad0057b60c3b0a4 273 SMART SM00967 28 104 2.1E-18 T 23-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DLM_3375 46b98e5457b57032423c6da651e05c45 332 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 321 1.8E-164 T 23-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 DLM_3375 46b98e5457b57032423c6da651e05c45 332 SUPERFAMILY SSF51735 1 261 3.55E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3375 46b98e5457b57032423c6da651e05c45 332 Gene3D G3DSA:3.40.50.720 4 305 1.8E-128 T 23-10-2018 DLM_3375 46b98e5457b57032423c6da651e05c45 332 Gene3D G3DSA:3.90.25.30 168 309 1.8E-128 T 23-10-2018 DLM_3375 46b98e5457b57032423c6da651e05c45 332 Pfam PF02719 Polysaccharide biosynthesis protein 7 278 4.7E-98 T 23-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DLM_2472 19cd613cf48d81b0f96060cf0f1636ae 217 SUPERFAMILY SSF56529 12 214 5.89E-62 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_2472 19cd613cf48d81b0f96060cf0f1636ae 217 Gene3D G3DSA:3.90.850.10 2 217 1.3E-70 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_2472 19cd613cf48d81b0f96060cf0f1636ae 217 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 208 1.4E-48 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DLM_4242 94aaf09aef98e2f45c3f483b396b9280 632 Gene3D G3DSA:3.40.50.12780 35 497 1.9E-102 T 23-10-2018 DLM_4242 94aaf09aef98e2f45c3f483b396b9280 632 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 58 3.8E-22 T 23-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DLM_4242 94aaf09aef98e2f45c3f483b396b9280 632 Gene3D G3DSA:3.30.300.30 500 632 8.0E-26 T 23-10-2018 DLM_4242 94aaf09aef98e2f45c3f483b396b9280 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 240 251 - T 23-10-2018 IPR020845 AMP-binding, conserved site DLM_4242 94aaf09aef98e2f45c3f483b396b9280 632 Pfam PF00501 AMP-binding enzyme 60 504 2.6E-84 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_4242 94aaf09aef98e2f45c3f483b396b9280 632 Pfam PF13193 AMP-binding enzyme C-terminal domain 513 596 2.5E-23 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DLM_4242 94aaf09aef98e2f45c3f483b396b9280 632 SUPERFAMILY SSF56801 4 608 2.62E-162 T 23-10-2018 DLM_4242 94aaf09aef98e2f45c3f483b396b9280 632 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 3 631 0.0 T 23-10-2018 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 ProSitePatterns PS00213 Lipocalin signature. 46 59 - T 23-10-2018 IPR022272 Lipocalin family conserved site DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 SUPERFAMILY SSF50814 24 187 1.81E-46 T 23-10-2018 IPR012674 Calycin DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 PRINTS PR01171 Bacterial lipocalin signature 47 61 2.5E-31 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 PRINTS PR01171 Bacterial lipocalin signature 149 160 2.5E-31 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 PRINTS PR01171 Bacterial lipocalin signature 134 142 2.5E-31 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 PRINTS PR01171 Bacterial lipocalin signature 83 92 2.5E-31 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 PRINTS PR01171 Bacterial lipocalin signature 117 131 2.5E-31 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 PRINTS PR01171 Bacterial lipocalin signature 176 186 2.5E-31 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 PRINTS PR01171 Bacterial lipocalin signature 64 80 2.5E-31 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 PIRSF PIRSF036893 16 192 1.9E-44 T 23-10-2018 IPR022271 Lipocalin, ApoD type DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 Gene3D G3DSA:2.40.128.20 21 189 3.2E-52 T 23-10-2018 IPR012674 Calycin DLM_1673 4e24200dea76b2838efc9da81f7c9950 192 Pfam PF08212 Lipocalin-like domain 48 187 4.0E-43 T 23-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain DLM_4429 14de5d35baf782c780d6edf4515a1820 295 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 288 1.9E-90 T 23-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DLM_4429 14de5d35baf782c780d6edf4515a1820 295 Gene3D G3DSA:3.40.1190.20 1 294 3.6E-90 T 23-10-2018 IPR029056 Ribokinase-like DLM_4429 14de5d35baf782c780d6edf4515a1820 295 Pfam PF00294 pfkB family carbohydrate kinase 1 283 1.3E-61 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB DLM_4429 14de5d35baf782c780d6edf4515a1820 295 SUPERFAMILY SSF53613 1 291 1.71E-72 T 23-10-2018 IPR029056 Ribokinase-like DLM_4429 14de5d35baf782c780d6edf4515a1820 295 Hamap MF_01987 Ribokinase [rbsK]. 2 290 24.54 T 23-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DLM_4429 14de5d35baf782c780d6edf4515a1820 295 PRINTS PR00990 Ribokinase signature 33 52 4.7E-32 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DLM_4429 14de5d35baf782c780d6edf4515a1820 295 PRINTS PR00990 Ribokinase signature 207 218 4.7E-32 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DLM_4429 14de5d35baf782c780d6edf4515a1820 295 PRINTS PR00990 Ribokinase signature 103 116 4.7E-32 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DLM_4429 14de5d35baf782c780d6edf4515a1820 295 PRINTS PR00990 Ribokinase signature 6 27 4.7E-32 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DLM_4429 14de5d35baf782c780d6edf4515a1820 295 PRINTS PR00990 Ribokinase signature 171 186 4.7E-32 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DLM_4429 14de5d35baf782c780d6edf4515a1820 295 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 237 250 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DLM_2632 158457049ae319bc5055ee7e56b73dfc 67 Pfam PF01527 Transposase 2 50 5.7E-11 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_2632 158457049ae319bc5055ee7e56b73dfc 67 SUPERFAMILY SSF46689 1 63 4.3E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3065 bb7626e4c0c927315c9032e7515eb46c 234 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 199 2.1E-44 T 23-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DLM_3065 bb7626e4c0c927315c9032e7515eb46c 234 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 21 224 3.6E-58 T 23-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DLM_3065 bb7626e4c0c927315c9032e7515eb46c 234 PIRSF PIRSF000857 1 230 9.6E-84 T 23-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DLM_3065 bb7626e4c0c927315c9032e7515eb46c 234 SUPERFAMILY SSF52402 2 186 2.09E-47 T 23-10-2018 DLM_3065 bb7626e4c0c927315c9032e7515eb46c 234 Gene3D G3DSA:3.40.50.620 2 232 1.6E-70 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3065 bb7626e4c0c927315c9032e7515eb46c 234 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 29 223 2.7E-79 T 23-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 DLM_2147 ed82b773c0b40a52fcb46189cfd922da 287 SUPERFAMILY SSF51735 114 282 5.65E-37 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2147 ed82b773c0b40a52fcb46189cfd922da 287 Gene3D G3DSA:3.40.50.10860 15 274 1.9E-80 T 23-10-2018 DLM_2147 ed82b773c0b40a52fcb46189cfd922da 287 SUPERFAMILY SSF53223 9 113 2.42E-26 T 23-10-2018 DLM_2147 ed82b773c0b40a52fcb46189cfd922da 287 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 15 101 1.5E-21 T 23-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DLM_2147 ed82b773c0b40a52fcb46189cfd922da 287 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 10 284 26.492 T 23-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DLM_2147 ed82b773c0b40a52fcb46189cfd922da 287 Gene3D G3DSA:3.40.50.720 112 252 1.9E-80 T 23-10-2018 DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 297 51.122 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 10 292 3.1E-125 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 SUPERFAMILY SSF53335 21 263 7.69E-48 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 Gene3D G3DSA:3.40.50.150 102 274 2.6E-44 T 23-10-2018 DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 Gene3D G3DSA:1.10.8.10 11 101 5.0E-5 T 23-10-2018 DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 PIRSF PIRSF037167 1 303 2.8E-132 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 295 7.5E-69 T 23-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 Pfam PF05175 Methyltransferase small domain 131 214 1.4E-17 T 23-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DLM_1867 d2f8e75c8ee36331dbb07107dc4c402b 306 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 201 207 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DLM_2428 227912278dc34cef4a32e9780fcffd63 271 Pfam PF00795 Carbon-nitrogen hydrolase 7 240 9.7E-42 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DLM_2428 227912278dc34cef4a32e9780fcffd63 271 SUPERFAMILY SSF56317 1 255 1.06E-63 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_2428 227912278dc34cef4a32e9780fcffd63 271 Gene3D G3DSA:3.60.110.10 1 256 4.0E-67 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_3123 5cb9ff17357696c27544b316e8a28aac 479 Pfam PF01266 FAD dependent oxidoreductase 37 402 1.2E-48 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_3123 5cb9ff17357696c27544b316e8a28aac 479 SUPERFAMILY SSF51905 27 310 8.42E-35 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3123 5cb9ff17357696c27544b316e8a28aac 479 Gene3D G3DSA:3.50.50.60 37 402 1.4E-63 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3123 5cb9ff17357696c27544b316e8a28aac 479 Gene3D G3DSA:3.30.9.10 131 362 1.4E-63 T 23-10-2018 DLM_3881 d6059563c4b4c4072d3cfda2137607eb 296 Gene3D G3DSA:1.10.3720.10 8 292 5.0E-53 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3881 d6059563c4b4c4072d3cfda2137607eb 296 SUPERFAMILY SSF161098 7 289 3.79E-56 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3881 d6059563c4b4c4072d3cfda2137607eb 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 287 1.2E-15 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3978 d0237472f5c91f7cd79df62e8b5299a7 165 SUPERFAMILY SSF55729 1 146 2.44E-20 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3978 d0237472f5c91f7cd79df62e8b5299a7 165 Gene3D G3DSA:3.40.630.30 1 164 2.2E-21 T 23-10-2018 DLM_3978 d0237472f5c91f7cd79df62e8b5299a7 165 Pfam PF00583 Acetyltransferase (GNAT) family 44 139 2.2E-7 T 23-10-2018 IPR000182 GNAT domain DLM_0711 e886ea5cf7af9d5a5e5bf2a56e2c103a 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_0711 e886ea5cf7af9d5a5e5bf2a56e2c103a 477 Gene3D G3DSA:3.40.309.10 251 442 1.5E-168 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0711 e886ea5cf7af9d5a5e5bf2a56e2c103a 477 SUPERFAMILY SSF53720 4 476 9.42E-155 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0711 e886ea5cf7af9d5a5e5bf2a56e2c103a 477 Gene3D G3DSA:3.40.605.10 24 467 1.5E-168 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0711 e886ea5cf7af9d5a5e5bf2a56e2c103a 477 Pfam PF00171 Aldehyde dehydrogenase family 22 471 2.9E-156 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_2827 783c95b1ee4b56db9c748277cd503618 435 Pfam PF01266 FAD dependent oxidoreductase 34 385 4.2E-52 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_2827 783c95b1ee4b56db9c748277cd503618 435 Gene3D G3DSA:3.50.50.60 34 387 6.7E-71 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2827 783c95b1ee4b56db9c748277cd503618 435 Gene3D G3DSA:3.30.9.10 127 349 6.7E-71 T 23-10-2018 DLM_2827 783c95b1ee4b56db9c748277cd503618 435 SUPERFAMILY SSF51905 31 336 1.1E-44 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3293 a5b622f300804421c45c314e5c01fea6 188 PIRSF PIRSF006707 1 176 3.5E-53 T 23-10-2018 IPR026282 DNA-binding protein, MJ1563 type DLM_3293 a5b622f300804421c45c314e5c01fea6 188 Pfam PF12802 MarR family 26 81 1.8E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3293 a5b622f300804421c45c314e5c01fea6 188 SUPERFAMILY SSF46785 6 149 1.37E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3293 a5b622f300804421c45c314e5c01fea6 188 Gene3D G3DSA:1.10.10.10 4 85 1.3E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1312 2b936a8f0e20b7107abced01452f056c 308 Gene3D G3DSA:3.10.180.10 147 287 2.5E-30 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_1312 2b936a8f0e20b7107abced01452f056c 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 150 262 4.2E-8 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_1312 2b936a8f0e20b7107abced01452f056c 308 SUPERFAMILY SSF54593 147 277 1.93E-26 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_3735 3bae9d2be1bb1cdbd20e2cb8b063fdd8 128 Pfam PF12279 Protein of unknown function (DUF3619) 11 123 1.1E-9 T 23-10-2018 IPR022064 Protein of unknown function DUF3619 DLM_0857 7d6bf8b7db7d758063fa0bea7c5cdf28 265 PIRSF PIRSF039085 10 265 1.0E-119 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DLM_0857 7d6bf8b7db7d758063fa0bea7c5cdf28 265 Pfam PF00005 ABC transporter 29 189 3.0E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0857 7d6bf8b7db7d758063fa0bea7c5cdf28 265 SMART SM00382 38 237 6.2E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0857 7d6bf8b7db7d758063fa0bea7c5cdf28 265 SUPERFAMILY SSF52540 14 259 3.9E-76 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0857 7d6bf8b7db7d758063fa0bea7c5cdf28 265 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0857 7d6bf8b7db7d758063fa0bea7c5cdf28 265 Gene3D G3DSA:3.40.50.300 9 264 3.3E-80 T 23-10-2018 DLM_2415 7e3e3ca7e648725da1aa836c8141a59b 461 Gene3D G3DSA:3.30.420.10 1 180 2.7E-62 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_2415 7e3e3ca7e648725da1aa836c8141a59b 461 Gene3D G3DSA:2.30.30.450 193 334 4.4E-46 T 23-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily DLM_2415 7e3e3ca7e648725da1aa836c8141a59b 461 Pfam PF08411 Exonuclease C-terminal 191 453 5.8E-91 T 23-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 DLM_2415 7e3e3ca7e648725da1aa836c8141a59b 461 PIRSF PIRSF000977 1 460 4.1E-196 T 23-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 DLM_2415 7e3e3ca7e648725da1aa836c8141a59b 461 Pfam PF00929 Exonuclease 4 172 2.8E-18 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_2415 7e3e3ca7e648725da1aa836c8141a59b 461 Gene3D G3DSA:1.20.1280.70 340 399 6.6E-19 T 23-10-2018 DLM_2415 7e3e3ca7e648725da1aa836c8141a59b 461 SUPERFAMILY SSF53098 2 454 6.38E-112 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_3970 16a6999e71d5b05cec957df21b1e1516 636 Pfam PF01964 Radical SAM ThiC family 138 597 1.9E-199 T 23-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DLM_3970 16a6999e71d5b05cec957df21b1e1516 636 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 136 600 7.7E-214 T 23-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DLM_3970 16a6999e71d5b05cec957df21b1e1516 636 Gene3D G3DSA:3.20.20.540 220 533 2.7E-151 T 23-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DLM_3970 16a6999e71d5b05cec957df21b1e1516 636 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 136 602 98.845 T 23-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DLM_3970 16a6999e71d5b05cec957df21b1e1516 636 Pfam PF13667 ThiC-associated domain 20 97 1.2E-33 T 23-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DLM_3414 0974f43560378dacef93129801ae1ceb 584 Gene3D G3DSA:1.25.40.10 402 582 4.4E-34 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 SUPERFAMILY SSF48452 109 360 1.86E-9 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 SMART SM00028 505 538 14.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 SMART SM00028 539 571 15.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 SMART SM00028 164 197 450.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 SMART SM00028 470 504 3.1 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 SMART SM00028 402 435 260.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 SMART SM00028 436 469 2.9 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 Pfam PF13432 Tetratricopeptide repeat 441 505 5.9E-9 T 23-10-2018 DLM_3414 0974f43560378dacef93129801ae1ceb 584 Pfam PF13432 Tetratricopeptide repeat 274 327 1.8E-6 T 23-10-2018 DLM_3414 0974f43560378dacef93129801ae1ceb 584 Pfam PF14559 Tetratricopeptide repeat 515 578 3.9E-8 T 23-10-2018 DLM_3414 0974f43560378dacef93129801ae1ceb 584 SUPERFAMILY SSF48452 404 572 1.14E-29 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 Gene3D G3DSA:1.25.40.10 77 232 5.5E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_3414 0974f43560378dacef93129801ae1ceb 584 Gene3D G3DSA:1.25.40.10 239 401 5.9E-11 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_0282 cdf74c6f7e99e16fbac0c7375c12c042 303 SUPERFAMILY SSF161098 26 297 2.99E-31 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0282 cdf74c6f7e99e16fbac0c7375c12c042 303 Gene3D G3DSA:1.10.3720.10 24 287 1.7E-27 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0282 cdf74c6f7e99e16fbac0c7375c12c042 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 288 2.2E-6 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1591 2ccc9d1908d9c22505bc3ae80683922a 234 Pfam PF09850 Type VI secretion system protein DotU 24 222 1.9E-55 T 23-10-2018 IPR017732 Type IV / VI secretion system, DotU DLM_1591 2ccc9d1908d9c22505bc3ae80683922a 234 Gene3D G3DSA:1.25.40.590 18 186 5.3E-40 T 23-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily DLM_1591 2ccc9d1908d9c22505bc3ae80683922a 234 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 23 228 2.2E-60 T 23-10-2018 IPR017732 Type IV / VI secretion system, DotU DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 4 193 3.2E-63 T 23-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 333 46.247 T 23-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 2.8E-73 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.8E-73 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 2.8E-73 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 2.8E-73 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 2.8E-73 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 2.8E-73 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 Gene3D G3DSA:3.30.540.10 1 195 4.0E-71 T 23-10-2018 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 SUPERFAMILY SSF56655 2 331 1.83E-113 T 23-10-2018 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 Gene3D G3DSA:3.40.190.80 196 334 4.6E-52 T 23-10-2018 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 PIRSF PIRSF500210 1 334 4.2E-127 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2023 f405ca1e1f0fc2c9f44402d4d4ad195e 334 PIRSF PIRSF000904 1 334 5.1E-125 T 23-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DLM_2611 8926b0e855616656806b101e64159478 287 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 286 46.855 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_2611 8926b0e855616656806b101e64159478 287 Pfam PF00551 Formyl transferase 92 268 8.2E-44 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_2611 8926b0e855616656806b101e64159478 287 Gene3D G3DSA:3.40.50.170 90 287 2.8E-75 T 23-10-2018 DLM_2611 8926b0e855616656806b101e64159478 287 Gene3D G3DSA:3.30.70.260 6 89 1.2E-19 T 23-10-2018 DLM_2611 8926b0e855616656806b101e64159478 287 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 286 7.2E-120 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_2611 8926b0e855616656806b101e64159478 287 PIRSF PIRSF036480 5 287 1.1E-116 T 23-10-2018 DLM_2611 8926b0e855616656806b101e64159478 287 SUPERFAMILY SSF53328 92 287 4.32E-64 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_2611 8926b0e855616656806b101e64159478 287 SUPERFAMILY SSF55021 8 88 2.96E-13 T 23-10-2018 DLM_2611 8926b0e855616656806b101e64159478 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 114 141 1.9E-56 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_2611 8926b0e855616656806b101e64159478 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 238 260 1.9E-56 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_2611 8926b0e855616656806b101e64159478 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 260 285 1.9E-56 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_2611 8926b0e855616656806b101e64159478 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 92 114 1.9E-56 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_2611 8926b0e855616656806b101e64159478 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.9E-56 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_2611 8926b0e855616656806b101e64159478 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.9E-56 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DLM_1474 1b87267896b31635fa29e2b7d8ea485f 323 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 47 278 1.4E-60 T 23-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DLM_1474 1b87267896b31635fa29e2b7d8ea485f 323 Gene3D G3DSA:3.40.50.620 25 229 1.4E-60 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1474 1b87267896b31635fa29e2b7d8ea485f 323 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 27 323 3.7E-149 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DLM_1474 1b87267896b31635fa29e2b7d8ea485f 323 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 22 323 53.862 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DLM_1474 1b87267896b31635fa29e2b7d8ea485f 323 PIRSF PIRSF002936 17 323 3.1E-148 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DLM_1474 1b87267896b31635fa29e2b7d8ea485f 323 SUPERFAMILY SSF52402 23 227 3.72E-69 T 23-10-2018 DLM_1549 ce08676c5654d71a6da2040dd182e164 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 278 3.2E-29 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_3983 d94ae24e9b9216c8c103902324256e5a 214 SUPERFAMILY SSF46689 5 85 1.07E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3983 d94ae24e9b9216c8c103902324256e5a 214 Gene3D G3DSA:1.10.357.10 2 187 6.0E-19 T 23-10-2018 DLM_3983 d94ae24e9b9216c8c103902324256e5a 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 57 5.1E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_4436 bb382f18ae8530bc55d9bd0980133e1d 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 95 2.0E-9 T 23-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DLM_4436 bb382f18ae8530bc55d9bd0980133e1d 217 Gene3D G3DSA:2.30.110.10 2 146 1.6E-37 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DLM_4436 bb382f18ae8530bc55d9bd0980133e1d 217 SUPERFAMILY SSF50475 5 211 3.93E-31 T 23-10-2018 DLM_2656 1de571f46add0c92cbd69a75efa766ba 515 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 498 1.3E-9 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_2656 1de571f46add0c92cbd69a75efa766ba 515 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 252 2.8E-14 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_2656 1de571f46add0c92cbd69a75efa766ba 515 Gene3D G3DSA:1.10.3720.10 270 510 3.2E-35 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2656 1de571f46add0c92cbd69a75efa766ba 515 SUPERFAMILY SSF161098 4 250 5.98E-47 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2656 1de571f46add0c92cbd69a75efa766ba 515 SUPERFAMILY SSF161098 269 503 2.34E-33 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2656 1de571f46add0c92cbd69a75efa766ba 515 Gene3D G3DSA:1.10.3720.10 7 254 1.6E-50 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2461 8510021fa932d08b2bf0cba9eb9003c9 333 Gene3D G3DSA:3.30.360.10 127 310 4.8E-107 T 23-10-2018 DLM_2461 8510021fa932d08b2bf0cba9eb9003c9 333 PIRSF PIRSF000148 1 332 1.2E-99 T 23-10-2018 DLM_2461 8510021fa932d08b2bf0cba9eb9003c9 333 SMART SM00859 3 118 7.8E-20 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DLM_2461 8510021fa932d08b2bf0cba9eb9003c9 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 312 8.2E-38 T 23-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DLM_2461 8510021fa932d08b2bf0cba9eb9003c9 333 Gene3D G3DSA:3.40.50.720 5 324 4.8E-107 T 23-10-2018 DLM_2461 8510021fa932d08b2bf0cba9eb9003c9 333 SUPERFAMILY SSF55347 128 314 1.13E-52 T 23-10-2018 DLM_2461 8510021fa932d08b2bf0cba9eb9003c9 333 SUPERFAMILY SSF51735 2 155 3.0E-38 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2461 8510021fa932d08b2bf0cba9eb9003c9 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 116 1.3E-21 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 Gene3D G3DSA:3.40.50.720 130 305 3.9E-141 T 23-10-2018 DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 Gene3D G3DSA:3.40.50.720 3 353 3.9E-141 T 23-10-2018 DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 1.3E-86 T 23-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.1E-47 T 23-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 SMART SM01002 149 297 1.1E-91 T 23-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 SUPERFAMILY SSF51735 137 303 3.81E-51 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 SUPERFAMILY SSF52283 1 360 2.04E-68 T 23-10-2018 DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 PIRSF PIRSF000183 1 371 5.4E-160 T 23-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 SMART SM01003 4 137 1.4E-80 T 23-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 23-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 DLM_0993 6327f529d8d2ac4410782c0d66df5004 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 2.3E-160 T 23-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DLM_3777 16e84c3c687bd63bb3d82bf544e8ed1e 145 Pfam PF04143 Sulphur transport 56 132 2.8E-8 T 23-10-2018 IPR007272 Sulphur transport domain DLM_1756 d69571004b9d84c40b6e12df2c9bd286 60 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.1E-24 T 23-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type DLM_1756 d69571004b9d84c40b6e12df2c9bd286 60 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 5.1E-22 T 23-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type DLM_0921 45c056e17db7d2f833ab56e52414ec2f 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 129 6.3E-30 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_0921 45c056e17db7d2f833ab56e52414ec2f 346 Pfam PF00107 Zinc-binding dehydrogenase 176 304 1.0E-27 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_0921 45c056e17db7d2f833ab56e52414ec2f 346 Gene3D G3DSA:3.90.180.10 1 345 8.3E-93 T 23-10-2018 DLM_0921 45c056e17db7d2f833ab56e52414ec2f 346 SMART SM00829 10 343 5.7E-8 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DLM_0921 45c056e17db7d2f833ab56e52414ec2f 346 SUPERFAMILY SSF51735 138 310 9.28E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0921 45c056e17db7d2f833ab56e52414ec2f 346 SUPERFAMILY SSF50129 1 167 4.07E-50 T 23-10-2018 IPR011032 GroES-like superfamily DLM_0921 45c056e17db7d2f833ab56e52414ec2f 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DLM_2276 8e0006de698d9019f662f64a817c8d4c 268 Gene3D G3DSA:3.40.190.10 117 223 4.9E-21 T 23-10-2018 DLM_2276 8e0006de698d9019f662f64a817c8d4c 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 261 1.3E-17 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2276 8e0006de698d9019f662f64a817c8d4c 268 Gene3D G3DSA:3.40.190.10 38 261 4.9E-21 T 23-10-2018 DLM_2276 8e0006de698d9019f662f64a817c8d4c 268 SUPERFAMILY SSF53850 31 264 7.56E-26 T 23-10-2018 DLM_2899 335f62b78ef932aae0646e6966934132 639 Pfam PF01584 CheW-like domain 500 623 1.5E-20 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2899 335f62b78ef932aae0646e6966934132 639 Gene3D G3DSA:1.10.287.560 239 307 3.7E-12 T 23-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 DLM_2899 335f62b78ef932aae0646e6966934132 639 SUPERFAMILY SSF50341 494 621 8.24E-24 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_2899 335f62b78ef932aae0646e6966934132 639 SMART SM00073 9 106 1.1E-23 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2899 335f62b78ef932aae0646e6966934132 639 SMART SM01231 239 307 5.6E-11 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DLM_2899 335f62b78ef932aae0646e6966934132 639 SUPERFAMILY SSF55874 310 493 2.49E-42 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2899 335f62b78ef932aae0646e6966934132 639 SUPERFAMILY SSF47384 240 308 7.85E-8 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2899 335f62b78ef932aae0646e6966934132 639 Pfam PF01627 Hpt domain 11 97 2.4E-16 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DLM_2899 335f62b78ef932aae0646e6966934132 639 SMART SM00387 352 495 1.9E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2899 335f62b78ef932aae0646e6966934132 639 Gene3D G3DSA:3.30.565.10 308 494 1.3E-60 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2899 335f62b78ef932aae0646e6966934132 639 Gene3D G3DSA:1.20.120.160 8 147 1.5E-34 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2899 335f62b78ef932aae0646e6966934132 639 Gene3D G3DSA:2.40.50.180 518 578 1.2E-28 T 23-10-2018 DLM_2899 335f62b78ef932aae0646e6966934132 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 2.4E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2899 335f62b78ef932aae0646e6966934132 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 2.4E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2899 335f62b78ef932aae0646e6966934132 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 449 2.4E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2899 335f62b78ef932aae0646e6966934132 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 2.4E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2899 335f62b78ef932aae0646e6966934132 639 Gene3D G3DSA:2.30.30.40 495 616 1.2E-28 T 23-10-2018 DLM_2899 335f62b78ef932aae0646e6966934132 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 494 7.1E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2899 335f62b78ef932aae0646e6966934132 639 SUPERFAMILY SSF47226 9 132 8.24E-30 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 DLM_2899 335f62b78ef932aae0646e6966934132 639 SMART SM00260 487 621 3.9E-22 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2899 335f62b78ef932aae0646e6966934132 639 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 240 307 7.1E-11 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DLM_2903 edd423aa0fe837ed5882ec180ee0e5f2 283 SUPERFAMILY SSF52141 99 279 6.21E-66 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_2903 edd423aa0fe837ed5882ec180ee0e5f2 283 SMART SM00987 123 270 2.2E-40 T 23-10-2018 DLM_2903 edd423aa0fe837ed5882ec180ee0e5f2 283 Gene3D G3DSA:3.40.470.10 98 282 1.2E-75 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_2903 edd423aa0fe837ed5882ec180ee0e5f2 283 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 109 270 1.0E-62 T 23-10-2018 IPR005273 Uracil-DNA glycosylase family 4 DLM_2903 edd423aa0fe837ed5882ec180ee0e5f2 283 SMART SM00986 123 270 2.2E-40 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_2903 edd423aa0fe837ed5882ec180ee0e5f2 283 Pfam PF03167 Uracil DNA glycosylase superfamily 125 269 1.9E-48 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_1994 c8cf80a8a8b9778052fa44c60ce155a4 402 Gene3D G3DSA:1.10.443.10 162 387 4.0E-33 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DLM_1994 c8cf80a8a8b9778052fa44c60ce155a4 402 Gene3D G3DSA:1.10.150.130 47 154 1.6E-10 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal DLM_1994 c8cf80a8a8b9778052fa44c60ce155a4 402 Pfam PF00589 Phage integrase family 171 365 1.0E-18 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DLM_1994 c8cf80a8a8b9778052fa44c60ce155a4 402 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 55 95 3.5E-5 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DLM_1994 c8cf80a8a8b9778052fa44c60ce155a4 402 SUPERFAMILY SSF56349 47 368 8.83E-39 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 SUPERFAMILY SSF51126 1 267 4.39E-54 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05594 Haemagluttinin repeat 571 652 8.2E-4 T 23-10-2018 IPR008619 Filamentous haemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05594 Haemagluttinin repeat 763 806 200.0 T 23-10-2018 IPR008619 Filamentous haemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05594 Haemagluttinin repeat 167 241 2.4E-5 T 23-10-2018 IPR008619 Filamentous haemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05594 Haemagluttinin repeat 534 569 4.4E-4 T 23-10-2018 IPR008619 Filamentous haemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05594 Haemagluttinin repeat 967 1007 0.28 T 23-10-2018 IPR008619 Filamentous haemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05594 Haemagluttinin repeat 374 432 1.5 T 23-10-2018 IPR008619 Filamentous haemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05594 Haemagluttinin repeat 440 489 14.0 T 23-10-2018 IPR008619 Filamentous haemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05594 Haemagluttinin repeat 283 361 27.0 T 23-10-2018 IPR008619 Filamentous haemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 14 113 9.2E-19 T 23-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 498 537 0.0027 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 227 261 0.97 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 539 578 0.0017 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 393 433 0.0012 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1274 1309 0.025 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 766 804 0.016 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 665 703 1.2 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 580 619 8.7E-8 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 620 662 0.022 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 244 275 0.036 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 434 472 3.8E-6 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 973 1011 5.8E-4 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1255 1290 0.031 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 744 779 0.23 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Gene3D G3DSA:2.160.20.10 1 277 3.9E-89 T 23-10-2018 IPR012334 Pectin lyase fold DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF04829 Pre-toxin domain with VENN motif 2347 2396 2.3E-17 T 23-10-2018 IPR006914 VENN motif-containing domain DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 SMART SM00912 1 118 3.4E-32 T 23-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF05860 haemagglutination activity domain 1 116 2.9E-26 T 23-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF13332 Haemagluttinin repeat 1614 1688 1.1E-6 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF13332 Haemagluttinin repeat 1695 1798 6.6E-8 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF13332 Haemagluttinin repeat 1395 1510 2.0E-8 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF13332 Haemagluttinin repeat 1532 1606 1.5E-7 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_2331 f7aba7ed532bba61857136e62e03c6e6 2661 Pfam PF13332 Haemagluttinin repeat 1842 2022 8.4E-40 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_1501 87da52bbbd70f5e774ecbd279a8844d7 309 Gene3D G3DSA:1.10.10.10 3 92 1.7E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1501 87da52bbbd70f5e774ecbd279a8844d7 309 Pfam PF03466 LysR substrate binding domain 91 294 6.6E-34 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1501 87da52bbbd70f5e774ecbd279a8844d7 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1501 87da52bbbd70f5e774ecbd279a8844d7 309 SUPERFAMILY SSF53850 92 297 2.71E-38 T 23-10-2018 DLM_1501 87da52bbbd70f5e774ecbd279a8844d7 309 SUPERFAMILY SSF46785 4 114 5.25E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1501 87da52bbbd70f5e774ecbd279a8844d7 309 Gene3D G3DSA:3.40.190.290 93 294 1.0E-50 T 23-10-2018 DLM_3813 0160e4adb1739181f40250ecde1e15c8 238 Gene3D G3DSA:3.30.420.490 111 227 1.1E-65 T 23-10-2018 DLM_3813 0160e4adb1739181f40250ecde1e15c8 238 SUPERFAMILY SSF53067 110 234 4.75E-27 T 23-10-2018 DLM_3813 0160e4adb1739181f40250ecde1e15c8 238 Gene3D G3DSA:3.30.420.40 3 232 1.1E-65 T 23-10-2018 DLM_3813 0160e4adb1739181f40250ecde1e15c8 238 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 231 7.0E-25 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DLM_3813 0160e4adb1739181f40250ecde1e15c8 238 Pfam PF03309 Type III pantothenate kinase 3 189 8.9E-50 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DLM_3813 0160e4adb1739181f40250ecde1e15c8 238 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 238 16.519 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DLM_3813 0160e4adb1739181f40250ecde1e15c8 238 SUPERFAMILY SSF53067 1 106 2.33E-24 T 23-10-2018 DLM_0436 70ad45d31a73ad4cf76cecfc85650903 253 Pfam PF08241 Methyltransferase domain 69 115 1.4E-7 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DLM_0436 70ad45d31a73ad4cf76cecfc85650903 253 SUPERFAMILY SSF53335 60 203 3.42E-13 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0436 70ad45d31a73ad4cf76cecfc85650903 253 Gene3D G3DSA:3.40.50.150 23 178 8.5E-15 T 23-10-2018 DLM_0479 4ccf8378415eeb5640ba9a576434e7b0 821 Pfam PF00577 Outer membrane usher protein 180 733 5.0E-138 T 23-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 DLM_0479 4ccf8378415eeb5640ba9a576434e7b0 821 Gene3D G3DSA:2.60.40.2610 648 738 4.1E-25 T 23-10-2018 DLM_0479 4ccf8378415eeb5640ba9a576434e7b0 821 Gene3D G3DSA:2.60.40.3110 250 339 2.2E-33 T 23-10-2018 DLM_0479 4ccf8378415eeb5640ba9a576434e7b0 821 Gene3D G3DSA:3.10.20.410 14 142 6.9E-27 T 23-10-2018 DLM_0479 4ccf8378415eeb5640ba9a576434e7b0 821 Gene3D G3DSA:2.60.40.2070 741 820 2.3E-7 T 23-10-2018 DLM_0479 4ccf8378415eeb5640ba9a576434e7b0 821 SUPERFAMILY SSF141729 16 140 9.81E-28 T 23-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 DLM_0479 4ccf8378415eeb5640ba9a576434e7b0 821 Pfam PF13953 PapC C-terminal domain 743 802 3.7E-11 T 23-10-2018 IPR025949 PapC-like, C-terminal domain DLM_0479 4ccf8378415eeb5640ba9a576434e7b0 821 Pfam PF13954 PapC N-terminal domain 17 165 1.3E-38 T 23-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.1E-5 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.1E-5 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 Gene3D G3DSA:1.10.287.130 187 301 2.1E-21 T 23-10-2018 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 SMART SM00387 351 454 1.9E-22 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 Gene3D G3DSA:3.30.565.10 306 453 2.7E-23 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 Pfam PF08521 Two-component sensor kinase N-terminal 21 158 2.2E-8 T 23-10-2018 IPR013727 Two-component sensor kinase, N-terminal DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 SMART SM00388 237 302 8.5E-15 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 SUPERFAMILY SSF47384 220 300 1.14E-16 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 300 1.4E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 Gene3D G3DSA:1.20.5.1040 2 58 4.5E-6 T 23-10-2018 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 Gene3D G3DSA:1.20.5.1040 143 186 1.2E-5 T 23-10-2018 DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 450 5.0E-14 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3449 1eb0c6a05e364b475f7fe5002036d7d4 454 SUPERFAMILY SSF55874 291 450 3.27E-29 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Gene3D G3DSA:3.30.565.10 736 889 2.3E-38 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 SUPERFAMILY SSF52402 253 376 2.16E-7 T 23-10-2018 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 SMART SM00388 668 734 9.6E-16 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 814 828 3.9E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 842 3.9E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 847 865 3.9E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 871 884 3.9E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 SMART SM00387 777 887 2.5E-33 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Pfam PF00512 His Kinase A (phospho-acceptor) domain 670 734 1.3E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 SUPERFAMILY SSF55874 724 889 6.81E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Gene3D G3DSA:1.10.287.130 660 735 2.7E-16 T 23-10-2018 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Gene3D G3DSA:3.30.450.40 519 659 5.6E-39 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 SUPERFAMILY SSF47384 656 734 1.16E-15 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Gene3D G3DSA:1.20.120.620 404 509 5.6E-36 T 23-10-2018 IPR038318 KdpD, transmembrane domain superfamily DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Pfam PF13492 GAF domain 536 649 3.3E-11 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Gene3D G3DSA:3.40.50.300 21 231 1.1E-101 T 23-10-2018 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Pfam PF13493 Domain of unknown function (DUF4118) 409 513 4.9E-30 T 23-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 SUPERFAMILY SSF55781 516 661 9.16E-13 T 23-10-2018 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 232 2.2E-98 T 23-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 DLM_1030 b10f6c46a1e9895426da81f8460ce238 899 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 885 2.5E-21 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 Gene3D G3DSA:2.130.10.10 20 379 2.1E-81 T 23-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 Pfam PF13360 PQQ-like domain 73 305 1.9E-56 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 375 1.1E-119 T 23-10-2018 IPR017687 Outer membrane protein assembly factor BamB DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 SMART SM00564 274 306 4.5E-5 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 SMART SM00564 140 171 30.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 SMART SM00564 100 131 2.3E-5 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 SMART SM00564 59 91 19.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 378 32.984 T 23-10-2018 IPR017687 Outer membrane protein assembly factor BamB DLM_0572 2a944934f01b0f3f5ff33837d70df596 379 SUPERFAMILY SSF50998 27 367 9.61E-67 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DLM_1990 b5656bcdc4290910b4cbb875b6f82898 160 SUPERFAMILY SSF55781 6 154 3.92E-40 T 23-10-2018 DLM_1990 b5656bcdc4290910b4cbb875b6f82898 160 Gene3D G3DSA:3.30.450.40 3 159 1.3E-57 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_1990 b5656bcdc4290910b4cbb875b6f82898 160 Pfam PF13185 GAF domain 37 154 1.9E-12 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_1990 b5656bcdc4290910b4cbb875b6f82898 160 SMART SM00065 32 160 0.0029 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_2969 fbd2c08d21b8c213443fe1090bf4adb9 196 Gene3D G3DSA:1.20.910.10 2 194 1.2E-47 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DLM_2969 fbd2c08d21b8c213443fe1090bf4adb9 196 Pfam PF01126 Heme oxygenase 9 190 4.8E-23 T 23-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 DLM_2969 fbd2c08d21b8c213443fe1090bf4adb9 196 SUPERFAMILY SSF48613 10 192 2.6E-48 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DLM_2772 bda51e09a7bda7fd971f21ebdd744bd7 159 Pfam PF12802 MarR family 49 111 1.4E-12 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2772 bda51e09a7bda7fd971f21ebdd744bd7 159 Gene3D G3DSA:1.10.10.10 17 153 6.1E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2772 bda51e09a7bda7fd971f21ebdd744bd7 159 SMART SM00347 44 146 7.4E-11 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_2772 bda51e09a7bda7fd971f21ebdd744bd7 159 SUPERFAMILY SSF46785 13 153 2.28E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2449 414c14228c28d56a3a3997746819d008 138 Gene3D G3DSA:2.20.25.10 1 32 1.1E-13 T 23-10-2018 DLM_2449 414c14228c28d56a3a3997746819d008 138 Gene3D G3DSA:3.30.300.20 39 136 2.1E-31 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_2449 414c14228c28d56a3a3997746819d008 138 SUPERFAMILY SSF82784 2 135 1.57E-41 T 23-10-2018 IPR036102 OsmC/Ohr superfamily DLM_2449 414c14228c28d56a3a3997746819d008 138 Pfam PF02566 OsmC-like protein 34 131 1.3E-18 T 23-10-2018 IPR003718 OsmC/Ohr family DLM_0451 d542e7710ad5444f160bf54a7c529a2e 268 Gene3D G3DSA:3.40.190.10 22 251 4.8E-67 T 23-10-2018 DLM_0451 d542e7710ad5444f160bf54a7c529a2e 268 Gene3D G3DSA:3.40.190.10 120 210 4.8E-67 T 23-10-2018 DLM_0451 d542e7710ad5444f160bf54a7c529a2e 268 SUPERFAMILY SSF53850 1 252 7.35E-72 T 23-10-2018 DLM_0451 d542e7710ad5444f160bf54a7c529a2e 268 SMART SM00079 32 252 0.0011 T 23-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DLM_0451 d542e7710ad5444f160bf54a7c529a2e 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 251 2.4E-61 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_0451 d542e7710ad5444f160bf54a7c529a2e 268 SMART SM00062 32 253 1.0E-70 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_0451 d542e7710ad5444f160bf54a7c529a2e 268 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 23-10-2018 IPR018313 Solute-binding protein family 3, conserved site DLM_3725 4d76bb0722da97ce170fed4046917af1 357 Gene3D G3DSA:2.60.40.420 97 232 1.1E-76 T 23-10-2018 IPR008972 Cupredoxin DLM_3725 4d76bb0722da97ce170fed4046917af1 357 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 14 232 6.4E-54 T 23-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 Gene3D G3DSA:1.10.287.90 25 96 1.1E-76 T 23-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 6 86 1.7E-15 T 23-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 258 331 6.0E-11 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 SUPERFAMILY SSF81464 7 89 2.45E-24 T 23-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 101 223 2.9E-38 T 23-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 SUPERFAMILY SSF49503 97 288 9.89E-51 T 23-10-2018 IPR008972 Cupredoxin DLM_3725 4d76bb0722da97ce170fed4046917af1 357 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 169 217 - T 23-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 PRINTS PR01166 Cytochrome c oxidase subunit II signature 188 205 1.3E-39 T 23-10-2018 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 116 1.3E-39 T 23-10-2018 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 PRINTS PR01166 Cytochrome c oxidase subunit II signature 168 188 1.3E-39 T 23-10-2018 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 223 1.3E-39 T 23-10-2018 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 PRINTS PR01166 Cytochrome c oxidase subunit II signature 63 75 1.3E-39 T 23-10-2018 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 PRINTS PR01166 Cytochrome c oxidase subunit II signature 144 165 1.3E-39 T 23-10-2018 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 PRINTS PR01166 Cytochrome c oxidase subunit II signature 75 95 1.3E-39 T 23-10-2018 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 Gene3D G3DSA:1.10.760.10 238 356 4.9E-29 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_3725 4d76bb0722da97ce170fed4046917af1 357 SUPERFAMILY SSF46626 251 339 6.25E-18 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4163 c33a9dcb8cbe8eb5c70057b9abf0a588 146 Pfam PF00156 Phosphoribosyl transferase domain 50 140 1.2E-6 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DLM_4163 c33a9dcb8cbe8eb5c70057b9abf0a588 146 Gene3D G3DSA:3.40.50.2020 8 146 3.1E-16 T 23-10-2018 DLM_4163 c33a9dcb8cbe8eb5c70057b9abf0a588 146 SUPERFAMILY SSF53271 2 144 2.1E-23 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like DLM_1520 36a06467c36170b7f4a2e9d3c72ee0d6 451 Gene3D G3DSA:3.20.20.30 2 450 2.6E-142 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_1520 36a06467c36170b7f4a2e9d3c72ee0d6 451 PIRSF PIRSF000337 3 446 5.0E-136 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DLM_1520 36a06467c36170b7f4a2e9d3c72ee0d6 451 Pfam PF00296 Luciferase-like monooxygenase 27 389 2.9E-53 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DLM_1520 36a06467c36170b7f4a2e9d3c72ee0d6 451 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 431 5.0E-164 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DLM_1520 36a06467c36170b7f4a2e9d3c72ee0d6 451 SUPERFAMILY SSF51679 3 435 1.18E-120 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_4253 6ffc6dd2958302415bf4acf814d73c02 579 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 561 2.1E-16 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4253 6ffc6dd2958302415bf4acf814d73c02 579 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 255 6.4E-12 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4253 6ffc6dd2958302415bf4acf814d73c02 579 Gene3D G3DSA:1.10.3720.10 370 566 6.6E-18 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4253 6ffc6dd2958302415bf4acf814d73c02 579 Gene3D G3DSA:1.10.3720.10 62 265 1.8E-24 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4253 6ffc6dd2958302415bf4acf814d73c02 579 SUPERFAMILY SSF161098 375 564 2.09E-19 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4253 6ffc6dd2958302415bf4acf814d73c02 579 SUPERFAMILY SSF161098 64 258 1.01E-20 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0278 938c1932ecfbec8ba52c05bbcf4ecf57 419 Pfam PF07759 Protein of unknown function (DUF1615) 94 414 8.2E-130 T 23-10-2018 IPR011673 Protein of unknown function DUF1615 DLM_0278 938c1932ecfbec8ba52c05bbcf4ecf57 419 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 83 414 2.0E-151 T 23-10-2018 IPR011673 Protein of unknown function DUF1615 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 659 1.7E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 1.7E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 1.7E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 645 1.7E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 Gene3D G3DSA:3.30.450.20 351 477 5.7E-10 T 23-10-2018 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 Gene3D G3DSA:1.20.1480.50 264 350 1.6E-12 T 23-10-2018 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 Gene3D G3DSA:1.10.287.130 478 552 1.1E-11 T 23-10-2018 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 Pfam PF00512 His Kinase A (phospho-acceptor) domain 484 552 2.9E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 SMART SM00388 483 555 1.2E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 PIRSF PIRSF037532 1 701 3.3E-228 T 23-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 Gene3D G3DSA:3.30.565.10 555 701 2.4E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 SUPERFAMILY SSF55785 351 473 4.95E-9 T 23-10-2018 IPR035965 PAS domain superfamily DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 SMART SM00304 295 347 6.5E-13 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 698 6.7E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 SUPERFAMILY SSF55874 542 698 1.83E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 SMART SM00387 592 700 1.4E-30 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 SUPERFAMILY SSF158472 297 344 1.44E-9 T 23-10-2018 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 SUPERFAMILY SSF47384 478 552 1.0E-10 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_4316 ad74cf2f658bead4f9b1dfd6734b3c33 701 Pfam PF00672 HAMP domain 296 343 1.9E-12 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 SMART SM01228 547 618 2.0E-39 T 23-10-2018 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 SUPERFAMILY SSF51905 6 259 3.38E-50 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 Pfam PF01134 Glucose inhibited division protein A 8 398 9.3E-165 T 23-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 Gene3D G3DSA:1.10.10.1800 459 551 2.1E-29 T 23-10-2018 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 621 5.6E-271 T 23-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 Gene3D G3DSA:1.10.150.570 570 622 4.4E-23 T 23-10-2018 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 Gene3D G3DSA:3.50.50.60 294 458 3.5E-57 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 Gene3D G3DSA:3.50.50.60 2 220 1.4E-84 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 Pfam PF13932 GidA associated domain 402 617 1.1E-74 T 23-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 23-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 625 42.175 T 23-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DLM_3671 c70ae564a7f2ceb10ff343df64328d02 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 23-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DLM_3968 da3addd9d43ff9d24f0ab03d708c9d54 104 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 101 2.7E-25 T 23-10-2018 IPR009799 EthD domain DLM_3968 da3addd9d43ff9d24f0ab03d708c9d54 104 SUPERFAMILY SSF54909 1 101 2.95E-17 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_3968 da3addd9d43ff9d24f0ab03d708c9d54 104 Gene3D G3DSA:3.30.70.100 2 100 1.6E-29 T 23-10-2018 DLM_3968 da3addd9d43ff9d24f0ab03d708c9d54 104 Pfam PF07110 EthD domain 18 91 9.1E-10 T 23-10-2018 IPR009799 EthD domain DLM_0548 4aa57a49c5b1e129ba4604588a4b5b5f 513 Gene3D G3DSA:1.20.1600.10 87 495 6.8E-109 T 23-10-2018 DLM_0548 4aa57a49c5b1e129ba4604588a4b5b5f 513 SUPERFAMILY SSF56954 18 497 1.19E-94 T 23-10-2018 DLM_0548 4aa57a49c5b1e129ba4604588a4b5b5f 513 Gene3D G3DSA:2.20.200.10 135 383 6.8E-109 T 23-10-2018 DLM_0548 4aa57a49c5b1e129ba4604588a4b5b5f 513 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 26 494 4.2E-107 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_0548 4aa57a49c5b1e129ba4604588a4b5b5f 513 Pfam PF02321 Outer membrane efflux protein 313 492 3.5E-30 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_0548 4aa57a49c5b1e129ba4604588a4b5b5f 513 Pfam PF02321 Outer membrane efflux protein 97 284 4.6E-23 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1346 4d1047764aa769dc870467a9e68dc685 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 193 2.8E-10 T 23-10-2018 DLM_1346 4d1047764aa769dc870467a9e68dc685 221 SUPERFAMILY SSF56784 2 204 9.61E-32 T 23-10-2018 IPR036412 HAD-like superfamily DLM_1346 4d1047764aa769dc870467a9e68dc685 221 Gene3D G3DSA:1.10.150.240 13 92 2.5E-48 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DLM_1346 4d1047764aa769dc870467a9e68dc685 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 193 2.5E-14 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1346 4d1047764aa769dc870467a9e68dc685 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 1.2E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1346 4d1047764aa769dc870467a9e68dc685 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 1.2E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1346 4d1047764aa769dc870467a9e68dc685 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 183 196 1.2E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1346 4d1047764aa769dc870467a9e68dc685 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 1.2E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_1346 4d1047764aa769dc870467a9e68dc685 221 Gene3D G3DSA:3.40.50.1000 4 205 2.5E-48 T 23-10-2018 IPR023214 HAD superfamily DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 Gene3D G3DSA:1.10.1020.10 57 151 4.0E-46 T 23-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 PIRSF PIRSF000398 1 254 4.5E-50 T 23-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 Gene3D G3DSA:3.40.50.150 7 223 4.0E-46 T 23-10-2018 DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 171 183 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 6.1E-13 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 230 1.3E-24 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DLM_0788 0fb30888da892376f7e2ed93dc58babf 254 SUPERFAMILY SSF53335 5 253 5.4E-64 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0027 92ff42eb77cd7f7085501915dcb3802b 295 Pfam PF06481 COX Aromatic Rich Motif 222 266 1.6E-15 T 23-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 DLM_0027 92ff42eb77cd7f7085501915dcb3802b 295 PIRSF PIRSF000292 1 289 4.9E-131 T 23-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DLM_0027 92ff42eb77cd7f7085501915dcb3802b 295 Gene3D G3DSA:2.60.40.420 96 264 2.6E-56 T 23-10-2018 IPR008972 Cupredoxin DLM_0027 92ff42eb77cd7f7085501915dcb3802b 295 SUPERFAMILY SSF49503 102 264 1.17E-50 T 23-10-2018 IPR008972 Cupredoxin DLM_0027 92ff42eb77cd7f7085501915dcb3802b 295 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 2 222 1.4E-113 T 23-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DLM_0027 92ff42eb77cd7f7085501915dcb3802b 295 Gene3D G3DSA:1.10.287.90 11 95 4.7E-35 T 23-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0027 92ff42eb77cd7f7085501915dcb3802b 295 SUPERFAMILY SSF81464 12 100 1.13E-25 T 23-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_1746 c5fed41a34dc6ed9a36547490f232d67 217 Pfam PF01810 LysE type translocator 14 210 3.1E-29 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 Pfam PF00376 MerR family regulatory protein 2 39 1.4E-14 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 9.0E-11 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.0E-11 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.0E-11 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 Pfam PF09278 MerR, DNA binding 44 108 1.1E-17 T 23-10-2018 IPR015358 Transcription regulator MerR, DNA binding DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 SMART SM00422 1 70 2.3E-23 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 Gene3D G3DSA:1.10.1660.10 1 125 2.0E-33 T 23-10-2018 DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 5.2E-53 T 23-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 SUPERFAMILY SSF46955 1 126 2.89E-34 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_1842 8c3961584752ef1984e6c0882220d6e6 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_4260 a4d23962a73312f08e15184704b3d9cb 280 SUPERFAMILY SSF51197 3 276 8.93E-58 T 23-10-2018 DLM_4260 a4d23962a73312f08e15184704b3d9cb 280 Gene3D G3DSA:2.60.120.330 1 279 1.1E-88 T 23-10-2018 IPR027443 Isopenicillin N synthase-like DLM_4260 a4d23962a73312f08e15184704b3d9cb 280 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 151 253 4.7E-15 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DLM_4260 a4d23962a73312f08e15184704b3d9cb 280 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 94 1.2E-9 T 23-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 487 611 7.4E-15 T 23-10-2018 IPR000014 PAS domain DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 Gene3D G3DSA:3.30.70.270 613 789 4.6E-60 T 23-10-2018 DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 615 773 6.1E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 Pfam PF13185 GAF domain 325 470 4.1E-18 T 23-10-2018 IPR003018 GAF domain GO:0005515 DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 SMART SM00052 786 1031 6.5E-125 T 23-10-2018 IPR001633 EAL domain DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 SMART SM00091 491 558 0.0024 T 23-10-2018 IPR000014 PAS domain DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 Gene3D G3DSA:3.20.20.450 790 1040 9.7E-103 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 SUPERFAMILY SSF55073 621 777 6.02E-52 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 SUPERFAMILY SSF141868 792 1039 2.09E-92 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 Pfam PF00990 Diguanylate cyclase, GGDEF domain 616 771 2.1E-49 T 23-10-2018 IPR000160 GGDEF domain DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 Gene3D G3DSA:3.30.450.40 299 480 1.2E-25 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 SMART SM00086 563 605 5.8E-8 T 23-10-2018 IPR001610 PAC motif DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 Pfam PF00563 EAL domain 792 1026 6.7E-75 T 23-10-2018 IPR001633 EAL domain DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 Gene3D G3DSA:3.30.450.20 481 612 9.6E-23 T 23-10-2018 DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 Pfam PF08448 PAS fold 501 607 1.3E-11 T 23-10-2018 IPR013656 PAS fold-4 DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 SMART SM00267 605 776 1.5E-67 T 23-10-2018 IPR000160 GGDEF domain DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 SUPERFAMILY SSF55785 479 603 8.03E-22 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2940 1740f97896493bfe3917bc915471e5b3 1047 SUPERFAMILY SSF55781 326 482 1.64E-21 T 23-10-2018 DLM_0613 1f141bdf189012612b9e1029ad1d7042 397 Pfam PF07690 Major Facilitator Superfamily 21 357 3.1E-38 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_0613 1f141bdf189012612b9e1029ad1d7042 397 Gene3D G3DSA:1.20.1720.10 13 388 1.2E-101 T 23-10-2018 DLM_0613 1f141bdf189012612b9e1029ad1d7042 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 387 2.0E-95 T 23-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DLM_0613 1f141bdf189012612b9e1029ad1d7042 397 SUPERFAMILY SSF103473 9 391 4.71E-59 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0819 d120cb94d78288db334b69df9221bcb3 415 Pfam PF12704 MacB-like periplasmic core domain 27 244 1.6E-20 T 23-10-2018 IPR025857 MacB-like periplasmic core domain DLM_0819 d120cb94d78288db334b69df9221bcb3 415 Pfam PF02687 FtsX-like permease family 302 408 4.5E-11 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DLM_0819 d120cb94d78288db334b69df9221bcb3 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 415 3.7E-159 T 23-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DLM_2388 cfc1e0f3ef9a563c7ab6c2b3d8cfbacc 98 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 1 86 4.6E-36 T 23-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype DLM_2388 cfc1e0f3ef9a563c7ab6c2b3d8cfbacc 98 Gene3D G3DSA:3.30.70.240 1 75 4.8E-30 T 23-10-2018 DLM_2388 cfc1e0f3ef9a563c7ab6c2b3d8cfbacc 98 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 1 86 5.7E-33 T 23-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype DLM_1872 1984398ea4854fc80d87a4a736213140 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 65 6.5E-9 T 23-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DLM_1872 1984398ea4854fc80d87a4a736213140 101 Gene3D G3DSA:3.30.70.100 2 99 3.1E-16 T 23-10-2018 DLM_1872 1984398ea4854fc80d87a4a736213140 101 SUPERFAMILY SSF54909 1 96 2.64E-17 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_1193 7c196287e04ebb55a94eb942f4c9d20d 376 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 370 9.4E-145 T 23-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition DLM_1193 7c196287e04ebb55a94eb942f4c9d20d 376 SUPERFAMILY SSF55729 181 351 5.83E-37 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_2670 8254f0525b550666a08bf26829a5bd4b 366 Gene3D G3DSA:3.30.1920.10 205 273 3.5E-126 T 23-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold DLM_2670 8254f0525b550666a08bf26829a5bd4b 366 SUPERFAMILY SSF69279 176 343 1.7E-54 T 23-10-2018 DLM_2670 8254f0525b550666a08bf26829a5bd4b 366 SUPERFAMILY SSF69279 5 174 3.34E-57 T 23-10-2018 DLM_2670 8254f0525b550666a08bf26829a5bd4b 366 PIRSF PIRSF004440 2 364 1.0E-57 T 23-10-2018 IPR026276 Baseplate protein GpP DLM_2670 8254f0525b550666a08bf26829a5bd4b 366 Gene3D G3DSA:2.30.300.10 10 338 3.5E-126 T 23-10-2018 DLM_2670 8254f0525b550666a08bf26829a5bd4b 366 Gene3D G3DSA:3.55.50.10 92 175 3.5E-126 T 23-10-2018 DLM_3690 f64cca495b99c1da67df6785bd2a8fa1 265 Pfam PF01026 TatD related DNase 12 257 1.8E-58 T 23-10-2018 IPR001130 TatD family GO:0016788 DLM_3690 f64cca495b99c1da67df6785bd2a8fa1 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 11 19 - T 23-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DLM_3690 f64cca495b99c1da67df6785bd2a8fa1 265 PIRSF PIRSF005902 6 262 3.2E-59 T 23-10-2018 IPR001130 TatD family GO:0016788 DLM_3690 f64cca495b99c1da67df6785bd2a8fa1 265 SUPERFAMILY SSF51556 11 259 2.73E-70 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_3690 f64cca495b99c1da67df6785bd2a8fa1 265 Gene3D G3DSA:3.20.20.140 10 259 1.3E-69 T 23-10-2018 DLM_3690 f64cca495b99c1da67df6785bd2a8fa1 265 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 132 142 - T 23-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DLM_3690 f64cca495b99c1da67df6785bd2a8fa1 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 195 211 - T 23-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DLM_2590 5d2490474c99c25aab39152ba16ee8fb 350 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 32 322 1.3E-118 T 23-10-2018 IPR011757 Lytic transglycosylase MltB DLM_2590 5d2490474c99c25aab39152ba16ee8fb 350 Gene3D G3DSA:1.10.8.350 31 196 6.4E-103 T 23-10-2018 DLM_2590 5d2490474c99c25aab39152ba16ee8fb 350 Gene3D G3DSA:1.10.530.10 70 321 6.4E-103 T 23-10-2018 DLM_2590 5d2490474c99c25aab39152ba16ee8fb 350 Pfam PF13406 Transglycosylase SLT domain 29 320 1.9E-91 T 23-10-2018 IPR031304 Transglycosylase SLT domain 2 DLM_2590 5d2490474c99c25aab39152ba16ee8fb 350 SUPERFAMILY SSF53955 18 325 2.62E-85 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_3580 0307ebe4320b94a6127474da332852d7 511 Gene3D G3DSA:1.20.1250.20 269 505 7.2E-15 T 23-10-2018 DLM_3580 0307ebe4320b94a6127474da332852d7 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 496 8.0E-176 T 23-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DLM_3580 0307ebe4320b94a6127474da332852d7 511 Gene3D G3DSA:1.20.1720.10 14 219 5.2E-44 T 23-10-2018 DLM_3580 0307ebe4320b94a6127474da332852d7 511 SUPERFAMILY SSF103473 4 498 1.7E-68 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3580 0307ebe4320b94a6127474da332852d7 511 Pfam PF07690 Major Facilitator Superfamily 19 411 1.3E-49 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1873 ba6b3d49013a6aa7d91a6c24db408977 298 Gene3D G3DSA:2.60.120.10 26 279 5.4E-64 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_1873 ba6b3d49013a6aa7d91a6c24db408977 298 Gene3D G3DSA:2.60.120.10 141 253 5.4E-64 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_1873 ba6b3d49013a6aa7d91a6c24db408977 298 PIRSF PIRSF006232 4 290 2.1E-55 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DLM_1873 ba6b3d49013a6aa7d91a6c24db408977 298 Pfam PF02678 Pirin 35 119 7.1E-15 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DLM_1873 ba6b3d49013a6aa7d91a6c24db408977 298 Pfam PF05726 Pirin C-terminal cupin domain 176 284 1.4E-17 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DLM_1873 ba6b3d49013a6aa7d91a6c24db408977 298 SUPERFAMILY SSF51182 28 287 1.22E-49 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 Gene3D G3DSA:3.40.50.720 1 245 2.2E-84 T 23-10-2018 DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.7E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.7E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.7E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.8E-4 T 23-10-2018 DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.3E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.3E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.3E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 SUPERFAMILY SSF51735 4 244 2.41E-84 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 3.3E-99 T 23-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 1.6E-66 T 23-10-2018 DLM_2857 5a40f20c80723c8bedd1cdd245647b72 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_1315 6a7ed41d816f72c91c5c1d4f1b71e579 384 Gene3D G3DSA:1.20.1250.20 2 195 7.8E-12 T 23-10-2018 DLM_1315 6a7ed41d816f72c91c5c1d4f1b71e579 384 SUPERFAMILY SSF103473 5 374 3.01E-30 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1315 6a7ed41d816f72c91c5c1d4f1b71e579 384 Pfam PF07690 Major Facilitator Superfamily 14 313 1.4E-15 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1315 6a7ed41d816f72c91c5c1d4f1b71e579 384 Gene3D G3DSA:1.20.1250.20 199 381 3.7E-10 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 SUPERFAMILY SSF81653 142 234 1.57E-22 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 109 597 1.8E-63 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 85 624 2.3E-153 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 329 335 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 537 1.4E-18 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 327 341 1.4E-18 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 185 199 1.4E-18 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 554 1.4E-18 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 442 453 1.4E-18 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 SUPERFAMILY SSF56784 326 621 1.08E-41 T 23-10-2018 IPR036412 HAD-like superfamily DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 Gene3D G3DSA:3.40.1110.10 338 449 4.2E-64 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 85 626 1.4E-135 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 530 4.7E-28 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 SUPERFAMILY SSF81665 86 321 1.83E-9 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 Gene3D G3DSA:2.70.150.20 128 240 3.3E-32 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 Pfam PF00122 E1-E2 ATPase 136 307 2.2E-44 T 23-10-2018 DLM_2582 7aa81ecdaed14bcd79abe6dcea396ec1 638 Gene3D G3DSA:3.40.50.1000 308 569 4.2E-64 T 23-10-2018 IPR023214 HAD superfamily DLM_0549 8cb8aa4a3b055b2ed28e73a18670faef 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.6E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_0549 8cb8aa4a3b055b2ed28e73a18670faef 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.6E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_0549 8cb8aa4a3b055b2ed28e73a18670faef 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 4.0E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_0549 8cb8aa4a3b055b2ed28e73a18670faef 198 SUPERFAMILY SSF46689 10 74 3.13E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0549 8cb8aa4a3b055b2ed28e73a18670faef 198 Gene3D G3DSA:1.10.357.10 2 187 2.2E-19 T 23-10-2018 DLM_0131 74d9b7f801af70af68f764ae8bb46fa4 264 Gene3D G3DSA:3.20.20.70 1 260 2.4E-116 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0131 74d9b7f801af70af68f764ae8bb46fa4 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 254 1.5E-105 T 23-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DLM_0131 74d9b7f801af70af68f764ae8bb46fa4 264 Hamap MF_00443 Thiazole synthase [thiG]. 4 260 41.934 T 23-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DLM_0131 74d9b7f801af70af68f764ae8bb46fa4 264 SUPERFAMILY SSF110399 3 245 1.96E-88 T 23-10-2018 DLM_0439 d1d72d6374d9bf8cf47e3b43a0ed02ac 227 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 223 3.6E-67 T 23-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DLM_0439 d1d72d6374d9bf8cf47e3b43a0ed02ac 227 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 222 3.3E-73 T 23-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DLM_0439 d1d72d6374d9bf8cf47e3b43a0ed02ac 227 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 222 43.343 T 23-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DLM_0439 d1d72d6374d9bf8cf47e3b43a0ed02ac 227 SUPERFAMILY SSF53448 4 222 6.5E-59 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_0439 d1d72d6374d9bf8cf47e3b43a0ed02ac 227 Gene3D G3DSA:3.90.550.10 2 224 2.9E-77 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_0439 d1d72d6374d9bf8cf47e3b43a0ed02ac 227 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 100 107 - T 23-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DLM_2300 0655f11314b41abf167a727587925bde 535 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 6.7E-14 T 23-10-2018 IPR000014 PAS domain DLM_2300 0655f11314b41abf167a727587925bde 535 Gene3D G3DSA:1.10.287.950 239 535 4.8E-58 T 23-10-2018 DLM_2300 0655f11314b41abf167a727587925bde 535 Pfam PF08447 PAS fold 31 114 2.3E-15 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 DLM_2300 0655f11314b41abf167a727587925bde 535 SUPERFAMILY SSF58104 246 531 4.45E-58 T 23-10-2018 DLM_2300 0655f11314b41abf167a727587925bde 535 SMART SM00283 269 530 4.2E-48 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2300 0655f11314b41abf167a727587925bde 535 SUPERFAMILY SSF55785 20 114 8.03E-27 T 23-10-2018 IPR035965 PAS domain superfamily DLM_2300 0655f11314b41abf167a727587925bde 535 SMART SM00091 8 74 8.2E-4 T 23-10-2018 IPR000014 PAS domain DLM_2300 0655f11314b41abf167a727587925bde 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 497 9.5E-35 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2300 0655f11314b41abf167a727587925bde 535 Gene3D G3DSA:3.30.450.20 11 155 1.6E-26 T 23-10-2018 DLM_3523 3435295ff5fb00bacc877b09cb307791 285 SUPERFAMILY SSF53328 1 198 3.4E-27 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_3523 3435295ff5fb00bacc877b09cb307791 285 Pfam PF00551 Formyl transferase 94 159 2.4E-7 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_3523 3435295ff5fb00bacc877b09cb307791 285 Gene3D G3DSA:3.40.50.12230 5 283 1.4E-32 T 23-10-2018 DLM_0457 d97c59659aa81106b1e27e435d4c62bc 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 87 2.2E-11 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_0457 d97c59659aa81106b1e27e435d4c62bc 212 SUPERFAMILY SSF52833 9 92 1.19E-16 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_0457 d97c59659aa81106b1e27e435d4c62bc 212 Gene3D G3DSA:1.20.1050.10 88 196 2.3E-75 T 23-10-2018 DLM_0457 d97c59659aa81106b1e27e435d4c62bc 212 SUPERFAMILY SSF47616 87 207 3.84E-15 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_0457 d97c59659aa81106b1e27e435d4c62bc 212 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 206 9.1E-42 T 23-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 DLM_0457 d97c59659aa81106b1e27e435d4c62bc 212 Gene3D G3DSA:3.40.30.10 11 204 2.3E-75 T 23-10-2018 DLM_4341 9dcd0650b8da2f25ce07dea7618762f3 435 Gene3D G3DSA:3.30.465.10 349 429 6.0E-31 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DLM_4341 9dcd0650b8da2f25ce07dea7618762f3 435 Pfam PF01595 Domain of unknown function DUF21 9 199 5.7E-43 T 23-10-2018 IPR002550 CNNM, transmembrane domain DLM_4341 9dcd0650b8da2f25ce07dea7618762f3 435 SUPERFAMILY SSF54631 201 337 2.2E-19 T 23-10-2018 DLM_4341 9dcd0650b8da2f25ce07dea7618762f3 435 Gene3D G3DSA:3.10.580.10 195 348 1.2E-32 T 23-10-2018 DLM_4341 9dcd0650b8da2f25ce07dea7618762f3 435 SUPERFAMILY SSF56176 346 430 5.73E-24 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_4341 9dcd0650b8da2f25ce07dea7618762f3 435 SMART SM01091 348 428 1.4E-30 T 23-10-2018 IPR005170 Transporter-associated domain DLM_4341 9dcd0650b8da2f25ce07dea7618762f3 435 Pfam PF03471 Transporter associated domain 349 427 3.0E-21 T 23-10-2018 IPR005170 Transporter-associated domain DLM_4341 9dcd0650b8da2f25ce07dea7618762f3 435 Pfam PF00571 CBS domain 282 334 6.0E-5 T 23-10-2018 IPR000644 CBS domain DLM_0762 0f74676bf3f1c1b1f9e46dfa08ce9e5e 244 Gene3D G3DSA:3.40.50.300 15 161 9.6E-8 T 23-10-2018 DLM_0762 0f74676bf3f1c1b1f9e46dfa08ce9e5e 244 SUPERFAMILY SSF52540 32 221 6.53E-15 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0762 0f74676bf3f1c1b1f9e46dfa08ce9e5e 244 Pfam PF13401 AAA domain 31 146 2.8E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 Pfam PF00106 short chain dehydrogenase 6 191 3.2E-42 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 Gene3D G3DSA:3.40.50.720 3 247 5.3E-57 T 23-10-2018 DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.2E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.2E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.2E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.2E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 SUPERFAMILY SSF51735 1 222 2.65E-54 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1217 72230380af3e27de343f88c2b35f9bf7 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_3431 4db33692f34f02c95aebe462ffa5d963 338 ProSitePatterns PS01276 Peptidase family U32 signature. 168 186 - T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DLM_3431 4db33692f34f02c95aebe462ffa5d963 338 Pfam PF01136 Peptidase family U32 83 337 7.2E-67 T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DLM_2941 d3e25e6f5d7afffade8c3d5ebb782dbd 344 Pfam PF03060 Nitronate monooxygenase 4 338 1.6E-77 T 23-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DLM_2941 d3e25e6f5d7afffade8c3d5ebb782dbd 344 SUPERFAMILY SSF51412 5 325 5.19E-56 T 23-10-2018 DLM_2941 d3e25e6f5d7afffade8c3d5ebb782dbd 344 Gene3D G3DSA:3.20.20.70 1 344 7.1E-106 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0833 226ba61d9618f9448289658164f4aa49 220 Pfam PF01966 HD domain 33 136 2.7E-12 T 23-10-2018 IPR006674 HD domain DLM_0833 226ba61d9618f9448289658164f4aa49 220 SUPERFAMILY SSF109604 10 217 2.77E-60 T 23-10-2018 DLM_0833 226ba61d9618f9448289658164f4aa49 220 Gene3D G3DSA:1.10.3210.50 7 220 1.2E-69 T 23-10-2018 DLM_0833 226ba61d9618f9448289658164f4aa49 220 SMART SM00471 28 146 2.5E-7 T 23-10-2018 IPR003607 HD/PDEase domain DLM_0752 37167a9d398162b08af72f539890ffbe 363 Pfam PF13416 Bacterial extracellular solute-binding protein 38 313 9.0E-24 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_0752 37167a9d398162b08af72f539890ffbe 363 Gene3D G3DSA:3.40.190.10 128 355 1.2E-118 T 23-10-2018 DLM_0752 37167a9d398162b08af72f539890ffbe 363 SUPERFAMILY SSF53850 23 360 6.14E-88 T 23-10-2018 DLM_0752 37167a9d398162b08af72f539890ffbe 363 Gene3D G3DSA:3.40.190.10 25 327 1.2E-118 T 23-10-2018 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 150 164 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 43 64 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 173 192 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 86 99 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 210 229 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 119 135 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 70 84 3.2E-53 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0752 37167a9d398162b08af72f539890ffbe 363 PIRSF PIRSF019574 3 361 2.6E-120 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0217 0a1643dd334089532bfc89593a360c36 291 PIRSF PIRSF036298 1 291 9.6E-159 T 23-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 DLM_0217 0a1643dd334089532bfc89593a360c36 291 Gene3D G3DSA:1.20.5.480 245 291 2.3E-18 T 23-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily DLM_0217 0a1643dd334089532bfc89593a360c36 291 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 131 142 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0217 0a1643dd334089532bfc89593a360c36 291 Gene3D G3DSA:3.30.70.20 26 225 7.8E-102 T 23-10-2018 DLM_0217 0a1643dd334089532bfc89593a360c36 291 Gene3D G3DSA:3.30.70.20 18 160 7.8E-102 T 23-10-2018 DLM_0217 0a1643dd334089532bfc89593a360c36 291 Pfam PF09163 Formate dehydrogenase N, transmembrane 244 287 2.3E-21 T 23-10-2018 IPR015246 Formate dehydrogenase, transmembrane DLM_0217 0a1643dd334089532bfc89593a360c36 291 Pfam PF13247 4Fe-4S dicluster domain 90 186 6.2E-25 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_0217 0a1643dd334089532bfc89593a360c36 291 SUPERFAMILY SSF81597 244 288 7.19E-14 T 23-10-2018 DLM_0217 0a1643dd334089532bfc89593a360c36 291 SUPERFAMILY SSF54862 24 249 3.14E-73 T 23-10-2018 DLM_0217 0a1643dd334089532bfc89593a360c36 291 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 288 1.2E-145 T 23-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 DLM_2520 f82cbf43279397a33afc176acba74624 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 139 222 5.7E-8 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal DLM_2520 f82cbf43279397a33afc176acba74624 234 SUPERFAMILY SSF52833 16 103 3.05E-23 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_2520 f82cbf43279397a33afc176acba74624 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 21 99 1.9E-13 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_2520 f82cbf43279397a33afc176acba74624 234 SUPERFAMILY SSF47616 102 231 3.9E-31 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_2520 f82cbf43279397a33afc176acba74624 234 Gene3D G3DSA:1.20.1050.10 106 221 1.6E-108 T 23-10-2018 DLM_2520 f82cbf43279397a33afc176acba74624 234 Gene3D G3DSA:3.40.30.10 7 231 1.6E-108 T 23-10-2018 DLM_3622 2ca06aad03372168521e651d0c0a9be2 414 Pfam PF11871 Domain of unknown function (DUF3391) 5 133 3.1E-28 T 23-10-2018 IPR021812 Protein of unknown function DUF3391 DLM_3622 2ca06aad03372168521e651d0c0a9be2 414 Pfam PF01966 HD domain 166 287 1.4E-15 T 23-10-2018 IPR006674 HD domain DLM_3622 2ca06aad03372168521e651d0c0a9be2 414 SMART SM00471 161 297 6.9E-7 T 23-10-2018 IPR003607 HD/PDEase domain DLM_3622 2ca06aad03372168521e651d0c0a9be2 414 SUPERFAMILY SSF109604 153 325 2.17E-30 T 23-10-2018 DLM_3622 2ca06aad03372168521e651d0c0a9be2 414 Gene3D G3DSA:1.10.3210.10 26 328 5.4E-69 T 23-10-2018 DLM_0304 ed1f4fde43fb29543badc1f25e1b5167 384 Gene3D G3DSA:3.90.1150.10 14 378 8.1E-114 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0304 ed1f4fde43fb29543badc1f25e1b5167 384 SUPERFAMILY SSF53383 2 381 1.97E-93 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0304 ed1f4fde43fb29543badc1f25e1b5167 384 Gene3D G3DSA:3.40.640.10 53 272 8.1E-114 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0304 ed1f4fde43fb29543badc1f25e1b5167 384 Pfam PF00155 Aminotransferase class I and II 46 375 6.4E-37 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_3684 72ae0e3174ca632073380d8c3977a810 373 SUPERFAMILY SSF81606 15 242 1.83E-28 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_3684 72ae0e3174ca632073380d8c3977a810 373 Gene3D G3DSA:3.60.40.10 2 244 5.4E-29 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_3684 72ae0e3174ca632073380d8c3977a810 373 SMART SM00332 4 240 1.3E-4 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.4E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.4E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.4E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.4E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.4E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.4E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.8E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.8E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.8E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.9E-58 T 23-10-2018 DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 Gene3D G3DSA:3.40.50.720 5 253 1.0E-72 T 23-10-2018 DLM_0709 d0966df6f031ac34762e47c4d8e3e8da 255 SUPERFAMILY SSF51735 5 252 1.57E-73 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 SUPERFAMILY SSF56935 20 392 3.05E-40 T 23-10-2018 DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 Gene3D G3DSA:2.40.160.10 19 392 4.5E-56 T 23-10-2018 IPR023614 Porin domain superfamily DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 93 103 4.4E-5 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 4.4E-5 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 212 224 4.4E-5 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 336 353 4.4E-5 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 PRINTS PR00184 Neisseria sp. porin signature 91 110 2.3E-11 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 PRINTS PR00184 Neisseria sp. porin signature 53 78 2.3E-11 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 PRINTS PR00184 Neisseria sp. porin signature 277 303 2.3E-11 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0607 c22c54e868cd43c0b798a9daceb39b2e 392 Pfam PF13609 Gram-negative porin 8 359 7.5E-30 T 23-10-2018 DLM_0612 39d454a205ce4cb65e9301ef88a97ba2 487 SUPERFAMILY SSF53720 10 483 7.07E-171 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_0612 39d454a205ce4cb65e9301ef88a97ba2 487 Gene3D G3DSA:3.40.605.10 27 474 2.9E-180 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0612 39d454a205ce4cb65e9301ef88a97ba2 487 Gene3D G3DSA:3.40.309.10 260 449 2.9E-180 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0612 39d454a205ce4cb65e9301ef88a97ba2 487 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 478 4.3E-206 T 23-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 DLM_0612 39d454a205ce4cb65e9301ef88a97ba2 487 Pfam PF00171 Aldehyde dehydrogenase family 24 479 1.3E-168 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0612 39d454a205ce4cb65e9301ef88a97ba2 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_0612 39d454a205ce4cb65e9301ef88a97ba2 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_0876 f2f51b00a925e7db691545ed0cb9bb64 431 Pfam PF04233 Phage Mu protein F like protein 59 177 2.6E-18 T 23-10-2018 IPR006528 Phage head morphogenesis domain DLM_2956 db20256de32cb695a804fefc421abfdd 494 Gene3D G3DSA:3.40.605.10 12 473 2.2E-180 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_2956 db20256de32cb695a804fefc421abfdd 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_2956 db20256de32cb695a804fefc421abfdd 494 Pfam PF00171 Aldehyde dehydrogenase family 12 479 2.0E-173 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_2956 db20256de32cb695a804fefc421abfdd 494 SUPERFAMILY SSF53720 3 483 7.46E-168 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_2956 db20256de32cb695a804fefc421abfdd 494 Gene3D G3DSA:3.40.309.10 257 449 2.2E-180 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_2956 db20256de32cb695a804fefc421abfdd 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_3757 c3fdbfd2423fc577d5390ef328a15362 194 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 15 194 32.824 T 23-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 DLM_3757 c3fdbfd2423fc577d5390ef328a15362 194 SUPERFAMILY SSF55821 15 193 1.34E-46 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DLM_3757 c3fdbfd2423fc577d5390ef328a15362 194 Pfam PF01300 Telomere recombination 24 192 2.5E-40 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 DLM_3757 c3fdbfd2423fc577d5390ef328a15362 194 Gene3D G3DSA:3.90.870.10 13 194 3.1E-50 T 23-10-2018 DLM_4232 38b0137112ad51b65ea19a8dca7ad433 450 Pfam PF00120 Glutamine synthetase, catalytic domain 114 444 2.9E-101 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_4232 38b0137112ad51b65ea19a8dca7ad433 450 SMART SM01230 112 367 2.5E-104 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_4232 38b0137112ad51b65ea19a8dca7ad433 450 SUPERFAMILY SSF54368 11 109 1.96E-16 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_4232 38b0137112ad51b65ea19a8dca7ad433 450 SUPERFAMILY SSF55931 112 446 4.02E-101 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DLM_4232 38b0137112ad51b65ea19a8dca7ad433 450 Gene3D G3DSA:3.30.590.10 115 448 3.0E-101 T 23-10-2018 DLM_4232 38b0137112ad51b65ea19a8dca7ad433 450 Gene3D G3DSA:3.10.20.70 7 113 4.2E-8 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_2971 0676baa4ab0066d804bfee452de5833f 421 Gene3D G3DSA:3.90.1150.10 7 413 5.6E-155 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2971 0676baa4ab0066d804bfee452de5833f 421 Pfam PF00202 Aminotransferase class-III 21 419 3.2E-124 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2971 0676baa4ab0066d804bfee452de5833f 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2971 0676baa4ab0066d804bfee452de5833f 421 Gene3D G3DSA:3.40.640.10 58 317 5.6E-155 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2971 0676baa4ab0066d804bfee452de5833f 421 SUPERFAMILY SSF53383 23 420 8.53E-128 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2971 0676baa4ab0066d804bfee452de5833f 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 420 2.7E-186 T 23-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 DLM_2971 0676baa4ab0066d804bfee452de5833f 421 PIRSF PIRSF000521 121 421 3.4E-41 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2971 0676baa4ab0066d804bfee452de5833f 421 PIRSF PIRSF000521 10 128 5.0E-4 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_3113 61b5283952b4113cf2f436f0fa8831ef 192 Gene3D G3DSA:3.40.50.850 2 188 2.5E-48 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_3113 61b5283952b4113cf2f436f0fa8831ef 192 SUPERFAMILY SSF52499 9 186 2.88E-46 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_3113 61b5283952b4113cf2f436f0fa8831ef 192 Pfam PF00857 Isochorismatase family 18 164 2.0E-26 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 DLM_0057 c1713048324a01258c6f7890a6c2dd5c 162 SUPERFAMILY SSF54862 36 144 5.44E-26 T 23-10-2018 DLM_0057 c1713048324a01258c6f7890a6c2dd5c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0057 c1713048324a01258c6f7890a6c2dd5c 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 27.987 T 23-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0057 c1713048324a01258c6f7890a6c2dd5c 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 138 1.5E-46 T 23-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0057 c1713048324a01258c6f7890a6c2dd5c 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 6.7E-13 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_0057 c1713048324a01258c6f7890a6c2dd5c 162 Gene3D G3DSA:3.30.70.3270 36 162 6.9E-38 T 23-10-2018 DLM_1446 0197def0b282932e36482aace5cebcfb 296 SUPERFAMILY SSF54814 181 295 1.6E-39 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DLM_1446 0197def0b282932e36482aace5cebcfb 296 Pfam PF07650 KH domain 208 283 4.0E-17 T 23-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_1446 0197def0b282932e36482aace5cebcfb 296 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 278 1.0E-82 T 23-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_1446 0197def0b282932e36482aace5cebcfb 296 Pfam PF01926 50S ribosome-binding GTPase 11 124 2.8E-23 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 DLM_1446 0197def0b282932e36482aace5cebcfb 296 Gene3D G3DSA:3.40.50.300 4 183 2.5E-45 T 23-10-2018 DLM_1446 0197def0b282932e36482aace5cebcfb 296 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 168 9.4E-28 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DLM_1446 0197def0b282932e36482aace5cebcfb 296 Hamap MF_00367 GTPase Era [era]. 6 295 34.108 T 23-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_1446 0197def0b282932e36482aace5cebcfb 296 Gene3D G3DSA:3.30.300.20 185 296 1.2E-36 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_1446 0197def0b282932e36482aace5cebcfb 296 SUPERFAMILY SSF52540 11 203 4.13E-40 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3143 52010be0c42465966653516fe7232e51 436 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 15 434 1.3E-218 T 23-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 DLM_3143 52010be0c42465966653516fe7232e51 436 Gene3D G3DSA:3.30.300.30 333 435 1.6E-28 T 23-10-2018 DLM_3143 52010be0c42465966653516fe7232e51 436 SUPERFAMILY SSF56801 23 429 4.84E-66 T 23-10-2018 DLM_3143 52010be0c42465966653516fe7232e51 436 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 434 1.9E-24 T 23-10-2018 IPR028154 AMP-dependent ligase, C-terminal DLM_3143 52010be0c42465966653516fe7232e51 436 Gene3D G3DSA:3.40.50.12780 1 332 4.4E-138 T 23-10-2018 DLM_3143 52010be0c42465966653516fe7232e51 436 PIRSF PIRSF006444 3 436 4.2E-205 T 23-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 DLM_3143 52010be0c42465966653516fe7232e51 436 Pfam PF00501 AMP-binding enzyme 87 293 2.7E-18 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 Pfam PF00654 Voltage gated chloride channel 81 426 3.2E-69 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 SUPERFAMILY SSF81340 18 444 2.22E-83 T 23-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 PRINTS PR00762 Chloride channel signature 393 412 2.7E-24 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 PRINTS PR00762 Chloride channel signature 179 198 2.7E-24 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 PRINTS PR00762 Chloride channel signature 93 110 2.7E-24 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 PRINTS PR00762 Chloride channel signature 127 146 2.7E-24 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 PRINTS PR00762 Chloride channel signature 375 391 2.7E-24 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 PRINTS PR00762 Chloride channel signature 346 366 2.7E-24 T 23-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DLM_3104 4a8bb0881bdac62856fceadbac9e82e8 452 Gene3D G3DSA:1.10.3080.10 36 452 7.9E-76 T 23-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DLM_2066 50b33d27f7c349ce16d66a78226cb5ad 168 SUPERFAMILY SSF54593 1 162 1.34E-24 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2066 50b33d27f7c349ce16d66a78226cb5ad 168 Gene3D G3DSA:3.10.180.10 1 150 2.1E-26 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2066 50b33d27f7c349ce16d66a78226cb5ad 168 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 135 5.9E-12 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_3956 073c5d320b5a6af656b3ed1a6df35dd9 244 Pfam PF02146 Sir2 family 23 195 3.8E-50 T 23-10-2018 IPR003000 Sirtuin family GO:0070403 DLM_3956 073c5d320b5a6af656b3ed1a6df35dd9 244 Gene3D G3DSA:3.30.1600.10 32 167 6.6E-70 T 23-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily DLM_3956 073c5d320b5a6af656b3ed1a6df35dd9 244 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 7 240 56.498 T 23-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 DLM_3956 073c5d320b5a6af656b3ed1a6df35dd9 244 SUPERFAMILY SSF52467 3 243 3.78E-77 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DLM_3956 073c5d320b5a6af656b3ed1a6df35dd9 244 Gene3D G3DSA:3.40.50.1220 14 239 6.6E-70 T 23-10-2018 DLM_2563 8761d524c52c297f76c16c32791e2b06 486 Pfam PF00171 Aldehyde dehydrogenase family 10 460 2.4E-121 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_2563 8761d524c52c297f76c16c32791e2b06 486 Gene3D G3DSA:3.40.605.10 8 449 1.0E-142 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_2563 8761d524c52c297f76c16c32791e2b06 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_2563 8761d524c52c297f76c16c32791e2b06 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_2563 8761d524c52c297f76c16c32791e2b06 486 Gene3D G3DSA:3.40.309.10 248 437 1.0E-142 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_2563 8761d524c52c297f76c16c32791e2b06 486 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 486 59.034 T 23-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 DLM_2563 8761d524c52c297f76c16c32791e2b06 486 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 485 7.1E-256 T 23-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 DLM_2563 8761d524c52c297f76c16c32791e2b06 486 SUPERFAMILY SSF53720 3 455 1.44E-126 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_4196 ef3868303ff882d5a9e86d19a54e0e42 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 181 347 6.7E-36 T 23-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DLM_4196 ef3868303ff882d5a9e86d19a54e0e42 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 2 135 3.1E-27 T 23-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4196 ef3868303ff882d5a9e86d19a54e0e42 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.5E-90 T 23-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4196 ef3868303ff882d5a9e86d19a54e0e42 356 SUPERFAMILY SSF53756 1 354 1.15E-105 T 23-10-2018 DLM_4196 ef3868303ff882d5a9e86d19a54e0e42 356 Gene3D G3DSA:3.40.50.2000 158 319 7.1E-99 T 23-10-2018 DLM_4196 ef3868303ff882d5a9e86d19a54e0e42 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 1 353 30.382 T 23-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DLM_4196 ef3868303ff882d5a9e86d19a54e0e42 356 Gene3D G3DSA:3.40.50.2000 2 157 7.1E-99 T 23-10-2018 DLM_2755 f15c2a8b1be8bd83266643584812ef63 111 Gene3D G3DSA:1.10.760.10 13 107 2.7E-16 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2755 f15c2a8b1be8bd83266643584812ef63 111 SUPERFAMILY SSF46626 10 106 9.75E-18 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2755 f15c2a8b1be8bd83266643584812ef63 111 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 34 103 2.5E-11 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_1407 c30845195895d116e79382ee520272bb 216 Pfam PF13557 Putative MetA-pathway of phenol degradation 68 212 8.8E-14 T 23-10-2018 IPR025737 MetA-pathway of phenol degradation, putative DLM_0718 25eb14adcd0fe0541868f27a03af68d1 504 Pfam PF04293 SpoVR like protein 9 441 1.8E-179 T 23-10-2018 IPR007390 Sporulation stage V, protein R DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 Gene3D G3DSA:2.40.160.10 22 372 1.8E-58 T 23-10-2018 IPR023614 Porin domain superfamily DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 Pfam PF13609 Gram-negative porin 9 347 2.7E-35 T 23-10-2018 DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 PRINTS PR00184 Neisseria sp. porin signature 281 307 4.6E-15 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 PRINTS PR00184 Neisseria sp. porin signature 192 209 4.6E-15 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 PRINTS PR00184 Neisseria sp. porin signature 320 344 4.6E-15 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 PRINTS PR00184 Neisseria sp. porin signature 50 75 4.6E-15 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 SUPERFAMILY SSF56935 15 365 1.13E-46 T 23-10-2018 DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 1.3E-6 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 48 59 1.3E-6 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0145 f0968c265d7393c850baa4632f68c9e5 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.3E-6 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0871 cc22092f7a57141f62068e53045485ff 342 Pfam PF03864 Phage major capsid protein E 14 339 1.0E-86 T 23-10-2018 IPR005564 Major capsid protein GpE DLM_4006 af566ae6ed054e78727908bf7e9c3d0d 237 Gene3D G3DSA:1.10.10.10 1 63 6.4E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4006 af566ae6ed054e78727908bf7e9c3d0d 237 Pfam PF08279 HTH domain 6 58 5.4E-13 T 23-10-2018 IPR013196 Helix-turn-helix, type 11 DLM_4006 af566ae6ed054e78727908bf7e9c3d0d 237 SUPERFAMILY SSF46785 1 60 2.65E-10 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4006 af566ae6ed054e78727908bf7e9c3d0d 237 Pfam PF13280 WYL domain 131 213 1.5E-17 T 23-10-2018 IPR026881 WYL domain DLM_2480 bce53feaf0e308a715974dfa080fbbec 242 Pfam PF01479 S4 domain 4 46 2.7E-7 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_2480 bce53feaf0e308a715974dfa080fbbec 242 Pfam PF00849 RNA pseudouridylate synthase 65 206 1.6E-10 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2480 bce53feaf0e308a715974dfa080fbbec 242 SMART SM00363 4 69 5.2E-5 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_2480 bce53feaf0e308a715974dfa080fbbec 242 SUPERFAMILY SSF55120 64 240 4.0E-36 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_2480 bce53feaf0e308a715974dfa080fbbec 242 Gene3D G3DSA:3.10.290.10 1 55 6.5E-18 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_2480 bce53feaf0e308a715974dfa080fbbec 242 Gene3D G3DSA:3.30.2350.10 59 242 5.0E-45 T 23-10-2018 DLM_2480 bce53feaf0e308a715974dfa080fbbec 242 SUPERFAMILY SSF55174 4 95 4.71E-14 T 23-10-2018 DLM_2480 bce53feaf0e308a715974dfa080fbbec 242 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 97 237 5.0E-37 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DLM_0044 681b9d89fe6d55f7b031c337776f5f0d 303 Gene3D G3DSA:1.10.3720.10 83 298 2.0E-27 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0044 681b9d89fe6d55f7b031c337776f5f0d 303 SUPERFAMILY SSF161098 46 291 6.17E-33 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0044 681b9d89fe6d55f7b031c337776f5f0d 303 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 38 298 2.0E-83 T 23-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DLM_0044 681b9d89fe6d55f7b031c337776f5f0d 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 295 6.7E-24 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1012 e8f36d262d2a4ef910c12659131e6bff 194 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 46 182 2.0E-33 T 23-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP DLM_1012 e8f36d262d2a4ef910c12659131e6bff 194 SUPERFAMILY SSF56925 37 194 8.63E-56 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DLM_1012 e8f36d262d2a4ef910c12659131e6bff 194 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 48 190 5.6E-57 T 23-10-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP DLM_1012 e8f36d262d2a4ef910c12659131e6bff 194 Gene3D G3DSA:2.40.160.20 35 194 1.3E-61 T 23-10-2018 DLM_4362 88fdafc0a78865672d1a625aee7a3740 608 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 379 552 1.4E-27 T 23-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal DLM_4362 88fdafc0a78865672d1a625aee7a3740 608 Pfam PF04932 O-Antigen ligase 197 356 4.4E-13 T 23-10-2018 IPR007016 O-antigen ligase-related DLM_4362 88fdafc0a78865672d1a625aee7a3740 608 Pfam PF15864 Protein glycosylation ligase 158 183 2.8E-10 T 23-10-2018 IPR031726 Protein glycosylation ligase domain DLM_4386 4db699faecc647fc357dc66039ab2823 123 PIRSF PIRSF002133 1 123 1.2E-53 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4386 4db699faecc647fc357dc66039ab2823 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.0E-60 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4386 4db699faecc647fc357dc66039ab2823 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.0E-60 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4386 4db699faecc647fc357dc66039ab2823 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.0E-60 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4386 4db699faecc647fc357dc66039ab2823 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.0E-60 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4386 4db699faecc647fc357dc66039ab2823 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.0E-60 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4386 4db699faecc647fc357dc66039ab2823 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.0E-60 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4386 4db699faecc647fc357dc66039ab2823 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.959 T 23-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4386 4db699faecc647fc357dc66039ab2823 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.6E-69 T 23-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4386 4db699faecc647fc357dc66039ab2823 123 Gene3D G3DSA:2.40.50.140 1 123 1.6E-62 T 23-10-2018 DLM_4386 4db699faecc647fc357dc66039ab2823 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4386 4db699faecc647fc357dc66039ab2823 123 SUPERFAMILY SSF50249 2 123 4.11E-52 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_4386 4db699faecc647fc357dc66039ab2823 123 Pfam PF00164 Ribosomal protein S12/S23 13 123 1.6E-42 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3288 c76282e55c6a0296663f573138f8df28 261 SUPERFAMILY SSF53850 29 252 3.64E-33 T 23-10-2018 DLM_3288 c76282e55c6a0296663f573138f8df28 261 Gene3D G3DSA:3.40.190.10 47 250 3.0E-20 T 23-10-2018 DLM_3288 c76282e55c6a0296663f573138f8df28 261 Gene3D G3DSA:3.40.190.10 110 207 3.0E-20 T 23-10-2018 DLM_3288 c76282e55c6a0296663f573138f8df28 261 SMART SM00062 45 253 0.0036 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3288 c76282e55c6a0296663f573138f8df28 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 251 5.2E-17 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3217 3b17f6986877455ea7bff05c83a6452a 373 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 147 163 - T 23-10-2018 IPR018201 Beta-ketoacyl synthase, active site DLM_3217 3b17f6986877455ea7bff05c83a6452a 373 SUPERFAMILY SSF53901 3 372 5.45E-53 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3217 3b17f6986877455ea7bff05c83a6452a 373 Gene3D G3DSA:3.40.47.10 1 213 1.8E-56 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_3217 3b17f6986877455ea7bff05c83a6452a 373 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 229 6.7E-21 T 23-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DLM_3217 3b17f6986877455ea7bff05c83a6452a 373 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 371 6.5E-21 T 23-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DLM_3217 3b17f6986877455ea7bff05c83a6452a 373 Gene3D G3DSA:3.40.47.10 218 372 4.4E-39 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 Gene3D G3DSA:1.25.40.10 132 251 3.0E-29 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 2 251 18.927 T 23-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 SMART SM00028 205 238 0.94 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 SMART SM00028 168 201 9.6 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 Pfam PF16331 TolA binding protein trimerisation 37 107 1.9E-22 T 23-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 Gene3D G3DSA:1.20.5.110 38 114 2.0E-8 T 23-10-2018 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 Pfam PF13432 Tetratricopeptide repeat 135 202 9.7E-10 T 23-10-2018 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 Pfam PF13174 Tetratricopeptide repeat 206 238 1.4E-4 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 SUPERFAMILY SSF48452 135 247 4.81E-17 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4277 eb9a1f4eb23024fc2f135b8cee5e9df8 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 132 248 3.8E-29 T 23-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal DLM_0973 9daab44ef485271fafed97872cff24cf 149 PRINTS PR01004 Flagellar FliJ protein signature 107 125 7.8E-5 T 23-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DLM_0973 9daab44ef485271fafed97872cff24cf 149 PRINTS PR01004 Flagellar FliJ protein signature 43 60 7.8E-5 T 23-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DLM_0973 9daab44ef485271fafed97872cff24cf 149 PRINTS PR01004 Flagellar FliJ protein signature 62 83 7.8E-5 T 23-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DLM_0973 9daab44ef485271fafed97872cff24cf 149 PRINTS PR01004 Flagellar FliJ protein signature 125 145 7.8E-5 T 23-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DLM_0973 9daab44ef485271fafed97872cff24cf 149 PIRSF PIRSF019404 1 147 1.3E-32 T 23-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 DLM_0973 9daab44ef485271fafed97872cff24cf 149 Pfam PF02050 Flagellar FliJ protein 19 141 4.9E-27 T 23-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DLM_0973 9daab44ef485271fafed97872cff24cf 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 142 5.5E-23 T 23-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DLM_0308 67fe0d081d5f199c878c6885bae365d9 240 Gene3D G3DSA:2.160.20.70 130 240 1.6E-31 T 23-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 DLM_0308 67fe0d081d5f199c878c6885bae365d9 240 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 7 239 24.242 T 23-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DLM_0308 67fe0d081d5f199c878c6885bae365d9 240 SUPERFAMILY SSF63848 133 238 1.24E-28 T 23-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 DLM_0308 67fe0d081d5f199c878c6885bae365d9 240 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 7 238 4.9E-59 T 23-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DLM_0308 67fe0d081d5f199c878c6885bae365d9 240 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 6 98 2.2E-9 T 23-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 DLM_0308 67fe0d081d5f199c878c6885bae365d9 240 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 134 235 8.1E-31 T 23-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 DLM_1648 b7a6f3207c5ae65de99afe1acfba6acd 460 PIRSF PIRSF000521 139 452 2.2E-20 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1648 b7a6f3207c5ae65de99afe1acfba6acd 460 PIRSF PIRSF000521 6 138 0.0016 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1648 b7a6f3207c5ae65de99afe1acfba6acd 460 SUPERFAMILY SSF53383 12 452 3.16E-120 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_1648 b7a6f3207c5ae65de99afe1acfba6acd 460 Pfam PF00202 Aminotransferase class-III 36 449 3.3E-87 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_1648 b7a6f3207c5ae65de99afe1acfba6acd 460 Gene3D G3DSA:3.40.640.10 71 346 1.5E-170 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1648 b7a6f3207c5ae65de99afe1acfba6acd 460 Gene3D G3DSA:3.90.1150.10 17 451 1.5E-170 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0620 ce42d4c6bded75c38829a4517d1c1516 316 Pfam PF12833 Helix-turn-helix domain 230 312 1.3E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0620 ce42d4c6bded75c38829a4517d1c1516 316 SMART SM00342 224 310 2.2E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_0620 ce42d4c6bded75c38829a4517d1c1516 316 Gene3D G3DSA:1.10.10.60 208 314 6.3E-30 T 23-10-2018 DLM_1624 9d034ca8cae07cc3cb591cb8b325575f 327 Pfam PF09588 YqaJ-like viral recombinase domain 21 158 2.3E-34 T 23-10-2018 IPR019080 YqaJ viral recombinase DLM_1624 9d034ca8cae07cc3cb591cb8b325575f 327 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 15 169 2.6E-39 T 23-10-2018 IPR017482 Putative phage-type endonuclease DLM_1624 9d034ca8cae07cc3cb591cb8b325575f 327 SUPERFAMILY SSF52980 12 203 1.09E-34 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DLM_1624 9d034ca8cae07cc3cb591cb8b325575f 327 Gene3D G3DSA:3.90.320.10 17 215 5.3E-38 T 23-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DLM_3508 9d034ca8cae07cc3cb591cb8b325575f 327 Pfam PF09588 YqaJ-like viral recombinase domain 21 158 2.3E-34 T 23-10-2018 IPR019080 YqaJ viral recombinase DLM_3508 9d034ca8cae07cc3cb591cb8b325575f 327 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 15 169 2.6E-39 T 23-10-2018 IPR017482 Putative phage-type endonuclease DLM_3508 9d034ca8cae07cc3cb591cb8b325575f 327 SUPERFAMILY SSF52980 12 203 1.09E-34 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DLM_3508 9d034ca8cae07cc3cb591cb8b325575f 327 Gene3D G3DSA:3.90.320.10 17 215 5.3E-38 T 23-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DLM_1620 69d2a3f8dd10bdca63cacbeac20a22f5 286 Pfam PF13276 HTH-like domain 45 98 8.2E-11 T 23-10-2018 IPR025948 HTH-like domain DLM_1620 69d2a3f8dd10bdca63cacbeac20a22f5 286 SUPERFAMILY SSF53098 107 266 4.17E-39 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1620 69d2a3f8dd10bdca63cacbeac20a22f5 286 Gene3D G3DSA:3.30.420.10 107 254 2.8E-19 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1620 69d2a3f8dd10bdca63cacbeac20a22f5 286 Pfam PF13683 Integrase core domain 197 263 1.2E-29 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_3517 69d2a3f8dd10bdca63cacbeac20a22f5 286 Pfam PF13276 HTH-like domain 45 98 8.2E-11 T 23-10-2018 IPR025948 HTH-like domain DLM_3517 69d2a3f8dd10bdca63cacbeac20a22f5 286 SUPERFAMILY SSF53098 107 266 4.17E-39 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_3517 69d2a3f8dd10bdca63cacbeac20a22f5 286 Gene3D G3DSA:3.30.420.10 107 254 2.8E-19 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_3517 69d2a3f8dd10bdca63cacbeac20a22f5 286 Pfam PF13683 Integrase core domain 197 263 1.2E-29 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_2889 2c836e3b1e4c91c385ffac9c7498bc9c 164 SMART SM00260 13 150 2.9E-39 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2889 2c836e3b1e4c91c385ffac9c7498bc9c 164 Gene3D G3DSA:2.40.50.180 36 145 8.1E-40 T 23-10-2018 DLM_2889 2c836e3b1e4c91c385ffac9c7498bc9c 164 Pfam PF01584 CheW-like domain 17 153 9.4E-37 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_2889 2c836e3b1e4c91c385ffac9c7498bc9c 164 Gene3D G3DSA:2.30.30.40 19 144 8.1E-40 T 23-10-2018 DLM_2889 2c836e3b1e4c91c385ffac9c7498bc9c 164 SUPERFAMILY SSF50341 12 155 5.75E-38 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 SUPERFAMILY SSF48452 9 197 9.86E-34 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 Gene3D G3DSA:1.25.40.10 76 144 3.5E-12 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 Gene3D G3DSA:1.25.40.10 2 75 2.1E-13 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 Gene3D G3DSA:1.25.40.10 145 266 3.1E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 Gene3D G3DSA:3.40.50.2000 375 453 5.1E-7 T 23-10-2018 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 Pfam PF07719 Tetratricopeptide repeat 37 68 1.0E-5 T 23-10-2018 IPR013105 Tetratricopeptide repeat 2 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 SUPERFAMILY SSF53756 220 459 2.29E-26 T 23-10-2018 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 SMART SM00028 138 171 0.028 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 SMART SM00028 2 35 31.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 SMART SM00028 36 69 3.5E-5 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 SMART SM00028 104 137 0.021 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 SMART SM00028 70 103 5.2 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 Pfam PF13432 Tetratricopeptide repeat 145 195 4.3E-4 T 23-10-2018 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 Pfam PF13432 Tetratricopeptide repeat 75 114 0.014 T 23-10-2018 DLM_4537 5c5ec70e0b083ef39bd0176dee587b92 479 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 395 430 1.5E-4 T 23-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DLM_0759 707907a900b266ef87a3b5fac5f938aa 113 SUPERFAMILY SSF51306 6 111 1.7E-22 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DLM_0759 707907a900b266ef87a3b5fac5f938aa 113 Pfam PF00717 Peptidase S24-like 27 91 1.0E-12 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DLM_0759 707907a900b266ef87a3b5fac5f938aa 113 Gene3D G3DSA:2.10.109.10 5 113 4.4E-13 T 23-10-2018 DLM_1260 c4be32165c1cebfe3951c3174802e874 475 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 210 362 1.3E-12 T 23-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain DLM_1260 c4be32165c1cebfe3951c3174802e874 475 PIRSF PIRSF007349 3 475 1.9E-174 T 23-10-2018 IPR007067 Tail sheath protein DLM_1260 c4be32165c1cebfe3951c3174802e874 475 Pfam PF17482 Phage tail sheath C-terminal domain 372 472 7.5E-16 T 23-10-2018 IPR020287 Tail sheath protein, C-terminal domain DLM_1277 3f21ab6966ae0a5d7547480844995b9c 140 Gene3D G3DSA:3.30.1380.10 3 135 1.0E-26 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DLM_1277 3f21ab6966ae0a5d7547480844995b9c 140 SUPERFAMILY SSF55166 14 135 8.63E-20 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DLM_1277 3f21ab6966ae0a5d7547480844995b9c 140 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 14 75 1.3E-4 T 23-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 DLM_0672 8f458542539981e01e386bd5169f5fc6 486 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 455 3.4E-146 T 23-10-2018 IPR003846 Uncharacterised protein family UPF0061 DLM_0672 8f458542539981e01e386bd5169f5fc6 486 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 472 45.502 T 23-10-2018 IPR003846 Uncharacterised protein family UPF0061 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 Gene3D G3DSA:2.30.110.50 33 363 3.9E-81 T 23-10-2018 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 538 645 1.7E-37 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_1302 272c99279bc4acc4966d7048db8ac195 881 SUPERFAMILY SSF69255 415 510 2.43E-31 T 23-10-2018 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 SUPERFAMILY SSF69349 500 558 7.06E-7 T 23-10-2018 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 Gene3D G3DSA:3.30.1920.30 246 315 3.9E-81 T 23-10-2018 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 SUPERFAMILY SSF69279 223 397 2.38E-14 T 23-10-2018 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 Gene3D G3DSA:2.40.50.230 408 515 2.3E-43 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_1302 272c99279bc4acc4966d7048db8ac195 881 Gene3D G3DSA:3.55.50.10 112 213 3.9E-81 T 23-10-2018 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 565 2.8E-98 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_1302 272c99279bc4acc4966d7048db8ac195 881 SUPERFAMILY SSF69279 23 209 2.66E-45 T 23-10-2018 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 557 4.2E-122 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_1302 272c99279bc4acc4966d7048db8ac195 881 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 697 849 5.4E-53 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_1302 272c99279bc4acc4966d7048db8ac195 881 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 1.3E-80 T 23-10-2018 DLM_1302 272c99279bc4acc4966d7048db8ac195 881 SUPERFAMILY SSF69349 699 850 8.63E-6 T 23-10-2018 DLM_0486 820f951a1442330eca645801bfc82cfc 134 SMART SM00945 21 126 3.6E-4 T 23-10-2018 IPR016103 ProQ/FinO domain DLM_0486 820f951a1442330eca645801bfc82cfc 134 Gene3D G3DSA:1.10.1710.10 2 113 1.0E-40 T 23-10-2018 IPR036442 ProQ/FinO domain superfamily DLM_0486 820f951a1442330eca645801bfc82cfc 134 Pfam PF04352 ProQ/FINO family 31 112 4.9E-16 T 23-10-2018 IPR016103 ProQ/FinO domain DLM_0486 820f951a1442330eca645801bfc82cfc 134 SUPERFAMILY SSF48657 7 110 1.31E-27 T 23-10-2018 IPR036442 ProQ/FinO domain superfamily DLM_1484 bee750457c691ceaa4222184261a9a4e 282 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 268 40.597 T 23-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DLM_1484 bee750457c691ceaa4222184261a9a4e 282 SUPERFAMILY SSF53335 9 277 2.32E-96 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1484 bee750457c691ceaa4222184261a9a4e 282 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 272 1.6E-81 T 23-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DLM_1484 bee750457c691ceaa4222184261a9a4e 282 Gene3D G3DSA:3.40.50.150 1 279 1.6E-112 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 Gene3D G3DSA:3.55.50.10 112 213 4.2E-81 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 Gene3D G3DSA:2.30.110.50 33 363 4.2E-81 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 Gene3D G3DSA:3.30.1920.30 246 315 4.2E-81 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 697 849 2.9E-53 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 SUPERFAMILY SSF69349 699 848 1.96E-6 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 1.5E-80 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 SUPERFAMILY SSF69255 415 510 2.56E-31 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 SUPERFAMILY SSF69279 223 397 2.55E-14 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 538 645 1.8E-37 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 565 3.1E-98 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 Gene3D G3DSA:2.40.50.230 408 515 2.4E-43 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 SUPERFAMILY SSF69279 23 209 2.89E-45 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 SUPERFAMILY SSF69349 500 558 7.53E-7 T 23-10-2018 DLM_3642 4a37750221cd39ec210d9d7a8bf830a2 921 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 557 4.7E-122 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_0551 4969db0cb56c1a733be1c00ce237a317 338 Gene3D G3DSA:3.30.360.10 126 325 9.7E-102 T 23-10-2018 DLM_0551 4969db0cb56c1a733be1c00ce237a317 338 Gene3D G3DSA:3.40.50.720 4 311 9.7E-102 T 23-10-2018 DLM_0551 4969db0cb56c1a733be1c00ce237a317 338 SUPERFAMILY SSF55347 133 292 8.99E-26 T 23-10-2018 DLM_0551 4969db0cb56c1a733be1c00ce237a317 338 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 244 5.1E-9 T 23-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DLM_0551 4969db0cb56c1a733be1c00ce237a317 338 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 117 8.0E-24 T 23-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DLM_0551 4969db0cb56c1a733be1c00ce237a317 338 SUPERFAMILY SSF51735 4 153 2.67E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2514 2eb22cb6ee12af268aab5caec6c3a8f1 392 SUPERFAMILY SSF52507 4 175 5.23E-59 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DLM_2514 2eb22cb6ee12af268aab5caec6c3a8f1 392 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 386 3.3E-129 T 23-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 DLM_2514 2eb22cb6ee12af268aab5caec6c3a8f1 392 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 183 362 1.0E-63 T 23-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DLM_2514 2eb22cb6ee12af268aab5caec6c3a8f1 392 Gene3D G3DSA:3.40.50.10300 183 391 1.7E-67 T 23-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DLM_2514 2eb22cb6ee12af268aab5caec6c3a8f1 392 Gene3D G3DSA:3.40.50.1950 1 182 2.0E-57 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DLM_2514 2eb22cb6ee12af268aab5caec6c3a8f1 392 SUPERFAMILY SSF102645 181 390 1.44E-69 T 23-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DLM_2514 2eb22cb6ee12af268aab5caec6c3a8f1 392 Pfam PF02441 Flavoprotein 5 173 8.0E-43 T 23-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DLM_3557 6d131d7a9efff26d4f9f22c75f49280b 380 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 12 372 29.71 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DLM_3557 6d131d7a9efff26d4f9f22c75f49280b 380 Pfam PF00561 alpha/beta hydrolase fold 49 357 3.4E-32 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_3557 6d131d7a9efff26d4f9f22c75f49280b 380 Gene3D G3DSA:1.10.1740.110 185 290 3.3E-141 T 23-10-2018 DLM_3557 6d131d7a9efff26d4f9f22c75f49280b 380 SUPERFAMILY SSF53474 14 373 1.52E-103 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3557 6d131d7a9efff26d4f9f22c75f49280b 380 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 20 371 1.1E-143 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DLM_3557 6d131d7a9efff26d4f9f22c75f49280b 380 Gene3D G3DSA:3.40.50.1820 24 358 3.3E-141 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3557 6d131d7a9efff26d4f9f22c75f49280b 380 PIRSF PIRSF000443 1 380 1.3E-134 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 Pfam PF00106 short chain dehydrogenase 5 131 6.7E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 SUPERFAMILY SSF51735 2 266 4.87E-37 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 1.2E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 1.2E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.2E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.2E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 152 0.007 T 23-10-2018 DLM_0506 1657b6703f7b9e8c57c8f1b91bb3b6da 280 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 146 265 5.8E-20 T 23-10-2018 DLM_0372 253e9cabe229fec6ca1d7baae1822f4a 490 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 68 226 1.3E-21 T 23-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like DLM_0215 a0bedb1059c15f555046a741906d7a20 306 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 40.636 T 23-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DLM_0215 a0bedb1059c15f555046a741906d7a20 306 PIRSF PIRSF018296 1 306 1.5E-110 T 23-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DLM_0215 a0bedb1059c15f555046a741906d7a20 306 SUPERFAMILY SSF144020 23 306 1.02E-83 T 23-10-2018 IPR024064 FdhE-like superfamily DLM_0215 a0bedb1059c15f555046a741906d7a20 306 Gene3D G3DSA:3.90.1670.10 23 306 2.4E-92 T 23-10-2018 IPR024064 FdhE-like superfamily DLM_0215 a0bedb1059c15f555046a741906d7a20 306 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 6.3E-97 T 23-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DLM_0215 a0bedb1059c15f555046a741906d7a20 306 Pfam PF04216 Protein involved in formate dehydrogenase formation 21 304 1.1E-104 T 23-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DLM_4226 0a8e61cd33a5a1bbcd6929d399597175 209 Gene3D G3DSA:1.10.10.10 1 90 2.6E-33 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4226 0a8e61cd33a5a1bbcd6929d399597175 209 SUPERFAMILY SSF46785 3 85 1.02E-28 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4226 0a8e61cd33a5a1bbcd6929d399597175 209 SUPERFAMILY SSF46785 89 168 2.13E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4226 0a8e61cd33a5a1bbcd6929d399597175 209 Pfam PF04337 Protein of unknown function, DUF480 6 153 2.6E-58 T 23-10-2018 IPR007432 Protein of unknown function DUF480 DLM_4226 0a8e61cd33a5a1bbcd6929d399597175 209 Hamap MF_01584 UPF0502 protein YceH [yceH]. 6 205 31.891 T 23-10-2018 IPR007432 Protein of unknown function DUF480 DLM_4226 0a8e61cd33a5a1bbcd6929d399597175 209 Gene3D G3DSA:1.10.10.10 92 171 4.1E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1060 161cb28fe855dcfd7d49146320ba55be 95 Gene3D G3DSA:3.10.129.10 1 95 2.0E-18 T 23-10-2018 DLM_1060 161cb28fe855dcfd7d49146320ba55be 95 Pfam PF03061 Thioesterase superfamily 3 63 4.0E-5 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DLM_1060 161cb28fe855dcfd7d49146320ba55be 95 SUPERFAMILY SSF54637 1 93 1.59E-17 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_3554 55278857f572592dec19e4df60faf920 133 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 44 111 5.8E-15 T 23-10-2018 IPR018660 C-type lysozyme inhibitor DLM_3554 55278857f572592dec19e4df60faf920 133 Gene3D G3DSA:2.40.128.200 39 119 1.9E-19 T 23-10-2018 IPR036328 C-type lysozyme inhibitor superfamily DLM_3554 55278857f572592dec19e4df60faf920 133 SUPERFAMILY SSF141488 40 112 6.54E-16 T 23-10-2018 IPR036328 C-type lysozyme inhibitor superfamily DLM_1280 6abcfeaaffca290c7d1b0a0771b0aada 139 Pfam PF06252 Protein of unknown function (DUF1018) 21 133 7.5E-24 T 23-10-2018 IPR009363 Bacteriophage Mu, Gp16 DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 SUPERFAMILY SSF46785 4 83 5.84E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.7E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 Pfam PF03466 LysR substrate binding domain 89 285 1.7E-19 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 Gene3D G3DSA:1.10.10.10 1 84 1.2E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 Gene3D G3DSA:3.40.190.290 94 272 2.4E-15 T 23-10-2018 DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2521 a7bf196c25625a08126bb33cec9ff7c7 286 SUPERFAMILY SSF53850 90 285 5.58E-23 T 23-10-2018 DLM_2367 3426062fba5c37b041f1f1de0a256d31 342 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 206 270 5.0E-27 T 23-10-2018 IPR017703 YgfZ/GcvT conserved site DLM_2367 3426062fba5c37b041f1f1de0a256d31 342 PIRSF PIRSF006487 10 323 1.0E-11 T 23-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DLM_2367 3426062fba5c37b041f1f1de0a256d31 342 Gene3D G3DSA:3.30.70.1630 44 212 3.8E-28 T 23-10-2018 DLM_2367 3426062fba5c37b041f1f1de0a256d31 342 Gene3D G3DSA:3.30.70.1400 46 134 3.8E-28 T 23-10-2018 DLM_2367 3426062fba5c37b041f1f1de0a256d31 342 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 149 2.8E-7 T 23-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DLM_2367 3426062fba5c37b041f1f1de0a256d31 342 Gene3D G3DSA:2.40.30.160 215 329 3.1E-30 T 23-10-2018 DLM_2367 3426062fba5c37b041f1f1de0a256d31 342 SUPERFAMILY SSF103025 23 261 7.69E-53 T 23-10-2018 DLM_0507 e4e67e61666c4de26ec76e25cc4672bf 322 Pfam PF03466 LysR substrate binding domain 90 295 7.5E-33 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_0507 e4e67e61666c4de26ec76e25cc4672bf 322 SUPERFAMILY SSF46785 5 114 5.04E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0507 e4e67e61666c4de26ec76e25cc4672bf 322 Gene3D G3DSA:1.10.10.10 4 91 1.4E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0507 e4e67e61666c4de26ec76e25cc4672bf 322 Gene3D G3DSA:3.40.190.10 165 267 4.5E-50 T 23-10-2018 DLM_0507 e4e67e61666c4de26ec76e25cc4672bf 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.6E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0507 e4e67e61666c4de26ec76e25cc4672bf 322 SUPERFAMILY SSF53850 91 296 2.17E-37 T 23-10-2018 DLM_0507 e4e67e61666c4de26ec76e25cc4672bf 322 Gene3D G3DSA:3.40.190.10 94 291 4.5E-50 T 23-10-2018 DLM_2815 59b9629d165e40ad442b6b4718fd9d53 302 SUPERFAMILY SSF53850 94 299 3.26E-30 T 23-10-2018 DLM_2815 59b9629d165e40ad442b6b4718fd9d53 302 Pfam PF03466 LysR substrate binding domain 93 296 2.4E-27 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2815 59b9629d165e40ad442b6b4718fd9d53 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 4.0E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2815 59b9629d165e40ad442b6b4718fd9d53 302 Gene3D G3DSA:3.40.190.290 95 295 2.7E-47 T 23-10-2018 DLM_2815 59b9629d165e40ad442b6b4718fd9d53 302 SUPERFAMILY SSF46785 5 115 3.34E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2815 59b9629d165e40ad442b6b4718fd9d53 302 Gene3D G3DSA:1.10.10.10 6 92 2.3E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2646 d171fd4e349933a05ff86a87af847fcd 92 Pfam PF01527 Transposase 4 70 4.1E-18 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_2646 d171fd4e349933a05ff86a87af847fcd 92 Gene3D G3DSA:1.10.10.60 7 89 1.7E-10 T 23-10-2018 DLM_2646 d171fd4e349933a05ff86a87af847fcd 92 SUPERFAMILY SSF46689 1 90 3.23E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2726 b4c53ad844906e99512cd1384b67432f 516 Gene3D G3DSA:1.10.3650.10 358 434 3.8E-27 T 23-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DLM_2726 b4c53ad844906e99512cd1384b67432f 516 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 490 4.7E-284 T 23-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DLM_2726 b4c53ad844906e99512cd1384b67432f 516 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 434 5.0E-27 T 23-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DLM_2726 b4c53ad844906e99512cd1384b67432f 516 Pfam PF13247 4Fe-4S dicluster domain 175 271 3.4E-37 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_2726 b4c53ad844906e99512cd1384b67432f 516 Gene3D G3DSA:3.30.70.20 1 304 1.4E-101 T 23-10-2018 DLM_2726 b4c53ad844906e99512cd1384b67432f 516 SUPERFAMILY SSF54862 1 497 1.88E-182 T 23-10-2018 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 Pfam PF02779 Transketolase, pyrimidine binding domain 590 786 1.0E-62 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 Pfam PF00676 Dehydrogenase E1 component 209 510 3.0E-50 T 23-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 Gene3D G3DSA:3.40.50.11610 724 931 4.7E-162 T 23-10-2018 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 SMART SM00861 590 787 2.2E-57 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 7 933 0.0 T 23-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 5 42 5.9E-17 T 23-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 PIRSF PIRSF000157 1 936 0.0 T 23-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 SUPERFAMILY SSF52518 573 794 4.22E-47 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 Gene3D G3DSA:3.40.50.12470 553 803 4.7E-162 T 23-10-2018 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 934 9.9E-51 T 23-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 Gene3D G3DSA:3.40.50.970 162 525 4.8E-142 T 23-10-2018 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 Gene3D G3DSA:1.10.287.1150 80 161 6.1E-22 T 23-10-2018 DLM_0355 716cd4047d3feaaf9bbd60f242536871 938 SUPERFAMILY SSF52518 118 544 2.81E-88 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold DLM_2129 dec493aea5182d4c7b59a43223b10223 455 Pfam PF07690 Major Facilitator Superfamily 4 394 8.0E-51 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2129 dec493aea5182d4c7b59a43223b10223 455 Gene3D G3DSA:1.20.1250.20 244 443 1.1E-11 T 23-10-2018 DLM_2129 dec493aea5182d4c7b59a43223b10223 455 SUPERFAMILY SSF103473 2 437 2.49E-56 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2129 dec493aea5182d4c7b59a43223b10223 455 Gene3D G3DSA:1.20.1720.10 1 230 2.0E-44 T 23-10-2018 DLM_4410 b7dabc0d29d0f3d337721b1cca983bce 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 6 63 19.409 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4410 b7dabc0d29d0f3d337721b1cca983bce 63 PIRSF PIRSF002211 3 63 7.2E-23 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4410 b7dabc0d29d0f3d337721b1cca983bce 63 Pfam PF00327 Ribosomal protein L30p/L7e 9 58 1.3E-16 T 23-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DLM_4410 b7dabc0d29d0f3d337721b1cca983bce 63 Gene3D G3DSA:3.30.1390.20 5 62 9.2E-23 T 23-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DLM_4410 b7dabc0d29d0f3d337721b1cca983bce 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 9 62 9.4E-20 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4410 b7dabc0d29d0f3d337721b1cca983bce 63 SUPERFAMILY SSF55129 7 62 3.79E-18 T 23-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 TIGRFAM TIGR00235 udk: uridine kinase 5 203 1.9E-81 T 23-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 PRINTS PR00988 Uridine kinase signature 171 184 4.7E-37 T 23-10-2018 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 PRINTS PR00988 Uridine kinase signature 149 160 4.7E-37 T 23-10-2018 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 PRINTS PR00988 Uridine kinase signature 135 145 4.7E-37 T 23-10-2018 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 PRINTS PR00988 Uridine kinase signature 79 94 4.7E-37 T 23-10-2018 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 PRINTS PR00988 Uridine kinase signature 34 45 4.7E-37 T 23-10-2018 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 PRINTS PR00988 Uridine kinase signature 4 21 4.7E-37 T 23-10-2018 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 186 4.4E-45 T 23-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 SUPERFAMILY SSF52540 3 189 8.02E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 Hamap MF_00551 Uridine kinase [udk]. 1 204 39.67 T 23-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 DLM_3228 198a7c2003421099c9be7feb4e1c8728 205 Gene3D G3DSA:3.40.50.300 2 205 5.2E-63 T 23-10-2018 DLM_1313 3c1538fb1e92e5e37a339a3cdc3e0f85 112 Pfam PF00355 Rieske [2Fe-2S] domain 2 87 6.4E-10 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DLM_1313 3c1538fb1e92e5e37a339a3cdc3e0f85 112 SUPERFAMILY SSF50022 2 106 6.29E-22 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_1313 3c1538fb1e92e5e37a339a3cdc3e0f85 112 Gene3D G3DSA:2.102.10.10 2 111 2.3E-12 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_3105 ec3fa94686cfceda3db3cc39d2e3da7a 103 Gene3D G3DSA:3.40.30.10 6 102 1.8E-35 T 23-10-2018 DLM_3105 ec3fa94686cfceda3db3cc39d2e3da7a 103 SUPERFAMILY SSF52833 1 102 1.59E-35 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3105 ec3fa94686cfceda3db3cc39d2e3da7a 103 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 4.4E-48 T 23-10-2018 IPR004480 Monothiol glutaredoxin-related DLM_3105 ec3fa94686cfceda3db3cc39d2e3da7a 103 Pfam PF00462 Glutaredoxin 16 81 8.3E-21 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DLM_3105 ec3fa94686cfceda3db3cc39d2e3da7a 103 PIRSF PIRSF005894 1 103 2.3E-50 T 23-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 DLM_1379 dee702f73387d189f6d37515f0d6a808 203 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 202 1.9E-102 T 23-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DLM_1379 dee702f73387d189f6d37515f0d6a808 203 SUPERFAMILY SSF52540 3 197 6.01E-37 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1379 dee702f73387d189f6d37515f0d6a808 203 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 46.545 T 23-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DLM_1379 dee702f73387d189f6d37515f0d6a808 203 PIRSF PIRSF005624 1 202 5.6E-47 T 23-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 DLM_1379 dee702f73387d189f6d37515f0d6a808 203 Gene3D G3DSA:3.40.50.300 5 202 1.2E-48 T 23-10-2018 DLM_1379 dee702f73387d189f6d37515f0d6a808 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 5.1E-37 T 23-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 Gene3D G3DSA:3.90.870.50 8 376 7.0E-144 T 23-10-2018 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 Pfam PF00708 Acylphosphatase 7 90 1.4E-21 T 23-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 Gene3D G3DSA:3.30.110.120 252 385 7.0E-144 T 23-10-2018 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 SUPERFAMILY SSF55821 176 408 4.27E-45 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 9 756 1.5E-224 T 23-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 23-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 Pfam PF07503 HypF finger 158 190 3.5E-14 T 23-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 Pfam PF07503 HypF finger 108 140 1.1E-16 T 23-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 Pfam PF01300 Telomere recombination 209 398 2.6E-50 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 SUPERFAMILY SSF54975 2 91 1.74E-24 T 23-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 Gene3D G3DSA:3.30.420.360 397 757 4.3E-115 T 23-10-2018 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 Gene3D G3DSA:3.30.420.350 500 745 4.3E-115 T 23-10-2018 DLM_2342 a1a5914edccd032ce4c2d67201d9a186 771 PIRSF PIRSF006256 1 767 4.8E-271 T 23-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 DLM_0406 fc092afb9f600baf417a2c9470532a49 329 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 13 310 1.2E-100 T 23-10-2018 IPR013398 CRISPR-associated protein Csy2 DLM_0406 fc092afb9f600baf417a2c9470532a49 329 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 13 310 6.4E-89 T 23-10-2018 IPR013398 CRISPR-associated protein Csy2 DLM_2953 615850e0e6709c4a58d48d12b902181d 284 SMART SM00382 30 221 2.4E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2953 615850e0e6709c4a58d48d12b902181d 284 SUPERFAMILY SSF52540 7 235 4.26E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2953 615850e0e6709c4a58d48d12b902181d 284 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2953 615850e0e6709c4a58d48d12b902181d 284 Pfam PF00005 ABC transporter 21 173 1.5E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2953 615850e0e6709c4a58d48d12b902181d 284 Gene3D G3DSA:3.40.50.300 7 270 8.5E-74 T 23-10-2018 DLM_3600 c41e9748efcef331af46d69153e47290 187 Pfam PF12019 Type II transport protein GspH 51 175 8.0E-14 T 23-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 DLM_3600 c41e9748efcef331af46d69153e47290 187 SUPERFAMILY SSF54523 14 87 2.35E-11 T 23-10-2018 DLM_3600 c41e9748efcef331af46d69153e47290 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 30 3.8E-5 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3600 c41e9748efcef331af46d69153e47290 187 Gene3D G3DSA:3.30.700.10 14 120 8.9E-6 T 23-10-2018 DLM_0071 31e8bbc58de16fd83de21dfee7f2747d 250 SUPERFAMILY SSF110997 174 248 1.06E-17 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_0071 31e8bbc58de16fd83de21dfee7f2747d 250 Pfam PF05036 Sporulation related domain 173 248 1.3E-16 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 DLM_0071 31e8bbc58de16fd83de21dfee7f2747d 250 Gene3D G3DSA:3.30.70.1070 168 250 2.8E-17 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 Gene3D G3DSA:3.40.50.1000 14 189 9.9E-41 T 23-10-2018 IPR023214 HAD superfamily DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 SUPERFAMILY SSF56784 13 194 8.88E-35 T 23-10-2018 IPR036412 HAD-like superfamily DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 Pfam PF13419 Haloacid dehalogenase-like hydrolase 85 188 1.7E-13 T 23-10-2018 DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 190 2.5E-14 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 1.1E-6 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.1E-6 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.1E-6 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.1E-6 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0645 41fe8b9c84815001f3c584c14556b7d7 208 Gene3D G3DSA:1.10.150.240 26 90 9.9E-41 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DLM_2125 55a52d7b452cc0e6f34e7b1bb80f9b96 211 PIRSF PIRSF000239 1 209 5.5E-78 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_2125 55a52d7b452cc0e6f34e7b1bb80f9b96 211 Pfam PF00578 AhpC/TSA family 6 135 8.4E-30 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_2125 55a52d7b452cc0e6f34e7b1bb80f9b96 211 Gene3D G3DSA:3.30.1020.10 146 210 4.2E-26 T 23-10-2018 DLM_2125 55a52d7b452cc0e6f34e7b1bb80f9b96 211 Gene3D G3DSA:3.40.30.10 1 145 2.5E-50 T 23-10-2018 DLM_2125 55a52d7b452cc0e6f34e7b1bb80f9b96 211 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 190 1.1E-10 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_2125 55a52d7b452cc0e6f34e7b1bb80f9b96 211 SUPERFAMILY SSF52833 3 209 9.87E-67 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3242 a05f260a28bf68ce1349b0f58f1839eb 400 Gene3D G3DSA:3.90.180.10 11 381 6.0E-141 T 23-10-2018 DLM_3242 a05f260a28bf68ce1349b0f58f1839eb 400 Gene3D G3DSA:3.40.50.720 178 344 6.0E-141 T 23-10-2018 DLM_3242 a05f260a28bf68ce1349b0f58f1839eb 400 SUPERFAMILY SSF50129 4 188 2.36E-63 T 23-10-2018 IPR011032 GroES-like superfamily DLM_3242 a05f260a28bf68ce1349b0f58f1839eb 400 Pfam PF00107 Zinc-binding dehydrogenase 197 265 2.5E-7 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_3242 a05f260a28bf68ce1349b0f58f1839eb 400 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DLM_3242 a05f260a28bf68ce1349b0f58f1839eb 400 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 144 4.5E-25 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_3242 a05f260a28bf68ce1349b0f58f1839eb 400 SUPERFAMILY SSF51735 162 356 2.02E-64 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3242 a05f260a28bf68ce1349b0f58f1839eb 400 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 394 1.0E-226 T 23-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 DLM_2854 5e7fa09fbc4f62b78358531c8b74b781 430 Pfam PF04715 Anthranilate synthase component I, N terminal region 58 125 4.9E-5 T 23-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_2854 5e7fa09fbc4f62b78358531c8b74b781 430 Gene3D G3DSA:3.60.120.10 2 428 4.4E-140 T 23-10-2018 IPR005801 ADC synthase GO:0009058 DLM_2854 5e7fa09fbc4f62b78358531c8b74b781 430 SUPERFAMILY SSF56322 24 426 2.62E-123 T 23-10-2018 IPR005801 ADC synthase GO:0009058 DLM_2854 5e7fa09fbc4f62b78358531c8b74b781 430 PRINTS PR00095 Anthranilate synthase component I signature 374 388 7.2E-16 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_2854 5e7fa09fbc4f62b78358531c8b74b781 430 PRINTS PR00095 Anthranilate synthase component I signature 279 292 7.2E-16 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_2854 5e7fa09fbc4f62b78358531c8b74b781 430 PRINTS PR00095 Anthranilate synthase component I signature 359 373 7.2E-16 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_2854 5e7fa09fbc4f62b78358531c8b74b781 430 PRINTS PR00095 Anthranilate synthase component I signature 265 278 7.2E-16 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DLM_2854 5e7fa09fbc4f62b78358531c8b74b781 430 Pfam PF00425 chorismate binding enzyme 165 417 2.7E-93 T 23-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DLM_1511 8233b4fe8227db3c5214e95016e4176c 306 SUPERFAMILY SSF54637 170 304 9.79E-18 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_1511 8233b4fe8227db3c5214e95016e4176c 306 SUPERFAMILY SSF54637 55 153 1.12E-16 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_1511 8233b4fe8227db3c5214e95016e4176c 306 Gene3D G3DSA:3.10.129.90 45 305 1.4E-65 T 23-10-2018 DLM_1511 8233b4fe8227db3c5214e95016e4176c 306 Pfam PF13622 Thioesterase-like superfamily 65 304 6.6E-38 T 23-10-2018 DLM_1039 6018ec1a1628d877e7f3b42067dbf057 346 Pfam PF00581 Rhodanese-like domain 14 125 2.5E-8 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_1039 6018ec1a1628d877e7f3b42067dbf057 346 SUPERFAMILY SSF52540 124 159 1.37E-5 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1039 6018ec1a1628d877e7f3b42067dbf057 346 SUPERFAMILY SSF52821 17 131 1.83E-22 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_1039 6018ec1a1628d877e7f3b42067dbf057 346 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 320 3.1E-112 T 23-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 DLM_1039 6018ec1a1628d877e7f3b42067dbf057 346 SMART SM00450 3 130 2.4E-8 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_1039 6018ec1a1628d877e7f3b42067dbf057 346 Gene3D G3DSA:3.40.250.10 3 131 2.5E-39 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_1003 2045d35e8d003d546108c537847b9813 539 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_1003 2045d35e8d003d546108c537847b9813 539 Pfam PF05199 GMC oxidoreductase 393 530 1.1E-39 T 23-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DLM_1003 2045d35e8d003d546108c537847b9813 539 Gene3D G3DSA:4.10.450.10 38 197 1.5E-170 T 23-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 DLM_1003 2045d35e8d003d546108c537847b9813 539 SUPERFAMILY SSF54373 292 479 5.69E-44 T 23-10-2018 DLM_1003 2045d35e8d003d546108c537847b9813 539 Gene3D G3DSA:3.30.410.40 151 476 1.5E-170 T 23-10-2018 DLM_1003 2045d35e8d003d546108c537847b9813 539 Pfam PF00732 GMC oxidoreductase 5 298 6.3E-87 T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_1003 2045d35e8d003d546108c537847b9813 539 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_1003 2045d35e8d003d546108c537847b9813 539 PIRSF PIRSF000137 1 539 1.8E-153 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_1003 2045d35e8d003d546108c537847b9813 539 Gene3D G3DSA:1.10.1220.110 97 150 1.5E-170 T 23-10-2018 DLM_1003 2045d35e8d003d546108c537847b9813 539 SUPERFAMILY SSF51905 1 539 4.44E-87 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1003 2045d35e8d003d546108c537847b9813 539 Gene3D G3DSA:3.50.50.60 4 534 1.5E-170 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 SUPERFAMILY SSF52210 298 453 3.66E-35 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 154 290 5.7E-45 T 23-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Gene3D G3DSA:3.40.50.261 133 293 5.7E-44 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 SUPERFAMILY SSF55729 732 878 3.01E-22 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Gene3D G3DSA:3.40.630.30 719 888 1.4E-42 T 23-10-2018 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Gene3D G3DSA:3.30.470.20 489 700 1.3E-77 T 23-10-2018 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 SUPERFAMILY SSF56059 488 702 3.14E-40 T 23-10-2018 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Gene3D G3DSA:3.30.1490.20 507 584 1.3E-77 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Gene3D G3DSA:3.40.50.261 296 459 1.5E-45 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 SUPERFAMILY SSF52210 132 291 3.79E-36 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Pfam PF13302 Acetyltransferase (GNAT) domain 736 874 3.9E-8 T 23-10-2018 IPR000182 GNAT domain DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Pfam PF13380 CoA binding domain 13 137 1.3E-18 T 23-10-2018 IPR003781 CoA-binding GO:0048037 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Pfam PF13549 ATP-grasp domain 481 702 2.0E-82 T 23-10-2018 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 Gene3D G3DSA:3.40.50.720 4 132 1.3E-34 T 23-10-2018 DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 SUPERFAMILY SSF51735 4 144 3.1E-28 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3311 ae844c8b8f01d344d1b3d1e2bb8de72a 891 SMART SM00881 9 103 1.1E-21 T 23-10-2018 IPR003781 CoA-binding GO:0048037 DLM_3727 27694380a54f40716049e5a4937099e5 214 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.2E-49 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DLM_3727 27694380a54f40716049e5a4937099e5 214 PIRSF PIRSF006755 1 214 5.5E-68 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DLM_3727 27694380a54f40716049e5a4937099e5 214 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 28.891 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DLM_3727 27694380a54f40716049e5a4937099e5 214 SUPERFAMILY SSF52540 1 208 4.93E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3727 27694380a54f40716049e5a4937099e5 214 Gene3D G3DSA:3.40.50.300 3 214 6.4E-65 T 23-10-2018 DLM_3727 27694380a54f40716049e5a4937099e5 214 Pfam PF13500 AAA domain 4 209 2.1E-39 T 23-10-2018 DLM_3786 4e09786a7e25a0ab306d668af9316f60 149 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 10 147 9.9E-36 T 23-10-2018 IPR012660 Thioesterase, putative DLM_3786 4e09786a7e25a0ab306d668af9316f60 149 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 5 146 3.0E-34 T 23-10-2018 IPR012660 Thioesterase, putative DLM_3786 4e09786a7e25a0ab306d668af9316f60 149 SUPERFAMILY SSF54637 3 146 9.19E-25 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_3786 4e09786a7e25a0ab306d668af9316f60 149 Gene3D G3DSA:3.10.129.10 2 146 6.9E-41 T 23-10-2018 DLM_3049 65d43855a44c8176f52fca2721156161 312 Pfam PF01522 Polysaccharide deacetylase 75 163 5.5E-11 T 23-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DLM_3049 65d43855a44c8176f52fca2721156161 312 SUPERFAMILY SSF88713 5 305 2.61E-86 T 23-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DLM_3049 65d43855a44c8176f52fca2721156161 312 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 304 1.5E-154 T 23-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 DLM_3049 65d43855a44c8176f52fca2721156161 312 Gene3D G3DSA:3.20.20.370 1 308 1.1E-106 T 23-10-2018 DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.9E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.9E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.9E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.9E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 8.4E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.4E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 8.4E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 Pfam PF00106 short chain dehydrogenase 6 191 3.4E-42 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 SUPERFAMILY SSF51735 1 222 2.54E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_0524 9a99239e050db1dab35dc8a2fc168261 252 Gene3D G3DSA:3.40.50.720 3 246 5.3E-55 T 23-10-2018 DLM_2358 5f89696fdea9498e6725ed45469a182f 306 Gene3D G3DSA:1.10.10.60 175 235 4.9E-14 T 23-10-2018 DLM_2358 5f89696fdea9498e6725ed45469a182f 306 SUPERFAMILY SSF51215 39 157 9.42E-5 T 23-10-2018 IPR037923 Transcription regulator HTH-like DLM_2358 5f89696fdea9498e6725ed45469a182f 306 Pfam PF12852 Cupin 7 161 7.1E-29 T 23-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain DLM_2358 5f89696fdea9498e6725ed45469a182f 306 Pfam PF12833 Helix-turn-helix domain 198 274 5.1E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_2358 5f89696fdea9498e6725ed45469a182f 306 SMART SM00342 192 274 7.5E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_2358 5f89696fdea9498e6725ed45469a182f 306 SUPERFAMILY SSF46689 228 274 2.64E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2358 5f89696fdea9498e6725ed45469a182f 306 Gene3D G3DSA:1.10.10.60 236 285 9.2E-9 T 23-10-2018 DLM_2358 5f89696fdea9498e6725ed45469a182f 306 SUPERFAMILY SSF46689 175 226 1.89E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1514 27e937bd3db17b2a33c9aa2f19439f0a 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 41.46 T 23-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 DLM_1514 27e937bd3db17b2a33c9aa2f19439f0a 196 Pfam PF00881 Nitroreductase family 18 174 8.6E-15 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DLM_1514 27e937bd3db17b2a33c9aa2f19439f0a 196 Gene3D G3DSA:3.40.109.10 7 195 2.3E-30 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_1514 27e937bd3db17b2a33c9aa2f19439f0a 196 SUPERFAMILY SSF55469 11 193 6.81E-41 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_3028 f301b616783af040d979cc02c97afb4a 184 SUPERFAMILY SSF52218 1 183 4.98E-47 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_3028 f301b616783af040d979cc02c97afb4a 184 Gene3D G3DSA:3.40.50.360 1 184 8.6E-62 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_3028 f301b616783af040d979cc02c97afb4a 184 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DLM_3028 f301b616783af040d979cc02c97afb4a 184 Pfam PF03358 NADPH-dependent FMN reductase 43 113 8.6E-10 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 Gene3D G3DSA:1.10.8.410 232 280 1.3E-21 T 23-10-2018 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 SUPERFAMILY SSF64518 1 280 8.89E-85 T 23-10-2018 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 PRINTS PR00207 Flagellin signature 111 134 3.4E-25 T 23-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 PRINTS PR00207 Flagellin signature 76 95 3.4E-25 T 23-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 PRINTS PR00207 Flagellin signature 37 54 3.4E-25 T 23-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 Gene3D G3DSA:1.20.58.1830 2 52 4.8E-5 T 23-10-2018 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 Gene3D G3DSA:1.20.1330.10 53 231 1.8E-52 T 23-10-2018 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 Pfam PF00700 Bacterial flagellin C-terminal helical region 195 279 6.6E-23 T 23-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DLM_0002 aadf47d37af4d20b10b9a62b7d86b092 280 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 8.9E-40 T 23-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DLM_1614 d24efc371c36f77f1a41761f53e24dc5 79 Pfam PF01527 Transposase 7 57 4.7E-11 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DLM_1614 d24efc371c36f77f1a41761f53e24dc5 79 SUPERFAMILY SSF46689 6 77 2.51E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1614 d24efc371c36f77f1a41761f53e24dc5 79 Gene3D G3DSA:1.10.10.60 4 75 6.8E-8 T 23-10-2018 DLM_3394 1b02439f0363a6c9ddc279522f2f2fc5 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_3394 1b02439f0363a6c9ddc279522f2f2fc5 381 PIRSF PIRSF001434 1 381 7.0E-147 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_3394 1b02439f0363a6c9ddc279522f2f2fc5 381 Gene3D G3DSA:3.40.640.10 1 246 1.8E-93 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3394 1b02439f0363a6c9ddc279522f2f2fc5 381 Gene3D G3DSA:3.90.1150.10 247 381 2.8E-50 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3394 1b02439f0363a6c9ddc279522f2f2fc5 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 379 4.4E-141 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_3394 1b02439f0363a6c9ddc279522f2f2fc5 381 SUPERFAMILY SSF53383 8 380 1.36E-119 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4077 386b366cc739815f9cc67413ada480ab 309 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 274 4.1E-39 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DLM_4077 386b366cc739815f9cc67413ada480ab 309 Gene3D G3DSA:3.40.50.720 93 275 4.0E-97 T 23-10-2018 DLM_4077 386b366cc739815f9cc67413ada480ab 309 SUPERFAMILY SSF51735 94 275 3.61E-44 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4077 386b366cc739815f9cc67413ada480ab 309 SUPERFAMILY SSF52283 28 123 1.47E-5 T 23-10-2018 DLM_4077 386b366cc739815f9cc67413ada480ab 309 Gene3D G3DSA:3.40.50.720 19 309 4.0E-97 T 23-10-2018 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 150 25.197 T 23-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 Gene3D G3DSA:3.30.110.10 56 150 2.0E-37 T 23-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 150 6.1E-64 T 23-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 56 1.4E-24 T 23-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 Gene3D G3DSA:3.10.20.80 1 55 1.2E-24 T 23-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 63 148 2.6E-38 T 23-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 ProSitePatterns PS00938 Initiation factor 3 signature. 38 51 - T 23-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 SUPERFAMILY SSF54364 2 57 1.23E-22 T 23-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DLM_2404 785001c1800a4541eea9ece09c62ee4d 150 SUPERFAMILY SSF55200 64 149 6.41E-34 T 23-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DLM_1208 77108d1b89b81d5cbeeb5c6cfe3b564b 316 SUPERFAMILY SSF46785 5 114 1.12E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1208 77108d1b89b81d5cbeeb5c6cfe3b564b 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.0E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1208 77108d1b89b81d5cbeeb5c6cfe3b564b 316 Pfam PF03466 LysR substrate binding domain 90 296 1.7E-31 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1208 77108d1b89b81d5cbeeb5c6cfe3b564b 316 Gene3D G3DSA:3.40.190.10 165 267 2.8E-49 T 23-10-2018 DLM_1208 77108d1b89b81d5cbeeb5c6cfe3b564b 316 Gene3D G3DSA:1.10.10.10 4 92 1.2E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1208 77108d1b89b81d5cbeeb5c6cfe3b564b 316 Gene3D G3DSA:3.40.190.10 93 292 2.8E-49 T 23-10-2018 DLM_1208 77108d1b89b81d5cbeeb5c6cfe3b564b 316 SUPERFAMILY SSF53850 90 298 1.99E-36 T 23-10-2018 DLM_3396 e4b9ad14d08c14d31489dc9181bcc4aa 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 19 116 4.5E-31 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_3396 e4b9ad14d08c14d31489dc9181bcc4aa 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 7.0E-19 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3396 e4b9ad14d08c14d31489dc9181bcc4aa 227 SUPERFAMILY SSF161098 21 215 6.15E-47 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3396 e4b9ad14d08c14d31489dc9181bcc4aa 227 Gene3D G3DSA:1.10.3720.10 10 224 2.8E-55 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0163 1901e5cfb60fc0c218b1376efcfa4551 181 Gene3D G3DSA:3.40.30.10 1 173 1.6E-25 T 23-10-2018 DLM_0163 1901e5cfb60fc0c218b1376efcfa4551 181 SUPERFAMILY SSF52833 9 164 1.68E-13 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_2203 f602625294a00364d6faaf37a0412cbc 137 SMART SM00226 5 133 1.1E-27 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DLM_2203 f602625294a00364d6faaf37a0412cbc 137 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 9.7E-5 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DLM_2203 f602625294a00364d6faaf37a0412cbc 137 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 105 120 9.7E-5 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DLM_2203 f602625294a00364d6faaf37a0412cbc 137 SUPERFAMILY SSF52788 4 128 4.58E-36 T 23-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DLM_2203 f602625294a00364d6faaf37a0412cbc 137 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 127 2.5E-20 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DLM_2203 f602625294a00364d6faaf37a0412cbc 137 Gene3D G3DSA:3.40.50.2300 3 130 2.8E-35 T 23-10-2018 DLM_0816 dfdaebd88c6165780edb4e830ea66025 552 Pfam PF03109 ABC1 family 111 229 2.3E-36 T 23-10-2018 IPR004147 UbiB domain DLM_0816 dfdaebd88c6165780edb4e830ea66025 552 SUPERFAMILY SSF56112 93 427 5.6E-30 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_3897 e0bafdecca26fbcddc7e5190c4242d80 366 SUPERFAMILY SSF51905 4 318 6.47E-43 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3897 e0bafdecca26fbcddc7e5190c4242d80 366 Gene3D G3DSA:3.50.50.60 5 355 7.5E-139 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3897 e0bafdecca26fbcddc7e5190c4242d80 366 Gene3D G3DSA:3.30.9.10 86 317 7.5E-139 T 23-10-2018 DLM_3897 e0bafdecca26fbcddc7e5190c4242d80 366 Pfam PF01266 FAD dependent oxidoreductase 5 358 1.6E-67 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_0875 7e0f4f3c4c24b250da587a9e2ff037b6 183 Pfam PF05069 Phage virion morphogenesis family 92 180 8.1E-7 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_0875 7e0f4f3c4c24b250da587a9e2ff037b6 183 Pfam PF05069 Phage virion morphogenesis family 14 88 3.8E-6 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_1639 387fa3456188ce103fb9b6e467c2e08b 177 Pfam PF01625 Peptide methionine sulfoxide reductase 3 156 1.8E-63 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DLM_1639 387fa3456188ce103fb9b6e467c2e08b 177 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 160 35.763 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DLM_1639 387fa3456188ce103fb9b6e467c2e08b 177 Gene3D G3DSA:3.30.1060.10 1 165 2.6E-68 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DLM_1639 387fa3456188ce103fb9b6e467c2e08b 177 SUPERFAMILY SSF55068 2 166 7.59E-72 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DLM_1639 387fa3456188ce103fb9b6e467c2e08b 177 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 147 7.5E-57 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DLM_2603 ab33522feacf25092934a0ef69014328 481 SUPERFAMILY SSF56059 21 468 1.26E-69 T 23-10-2018 DLM_2603 ab33522feacf25092934a0ef69014328 481 PIRSF PIRSF005522 1 480 9.8E-232 T 23-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 DLM_2603 ab33522feacf25092934a0ef69014328 481 Gene3D G3DSA:3.40.50.11290 216 313 2.0E-43 T 23-10-2018 DLM_2603 ab33522feacf25092934a0ef69014328 481 Gene3D G3DSA:3.30.1490.270 350 410 6.2E-25 T 23-10-2018 DLM_2603 ab33522feacf25092934a0ef69014328 481 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 453 1.4E-165 T 23-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 DLM_0410 b5e771e2979e60e2b5218310fcf515a8 325 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 20 293 2.0E-58 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DLM_0410 b5e771e2979e60e2b5218310fcf515a8 325 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 16 318 15.251 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DLM_0410 b5e771e2979e60e2b5218310fcf515a8 325 Gene3D G3DSA:1.20.120.920 114 324 1.3E-59 T 23-10-2018 DLM_0410 b5e771e2979e60e2b5218310fcf515a8 325 Pfam PF01867 CRISPR associated protein Cas1 37 272 8.6E-10 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DLM_0410 b5e771e2979e60e2b5218310fcf515a8 325 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 12 317 1.4E-150 T 23-10-2018 IPR019857 CRISPR-associated protein Cas1, YPEST subtype GO:0004520|GO:0043571|GO:0046872 DLM_0410 b5e771e2979e60e2b5218310fcf515a8 325 Gene3D G3DSA:3.100.10.20 11 113 7.0E-48 T 23-10-2018 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 57 68 2.9E-9 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 105 115 2.9E-9 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 2.9E-9 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 165 176 2.9E-9 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 PRINTS PR00184 Neisseria sp. porin signature 59 84 3.1E-9 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 PRINTS PR00184 Neisseria sp. porin signature 316 340 3.1E-9 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 Pfam PF13609 Gram-negative porin 9 344 5.7E-48 T 23-10-2018 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 SUPERFAMILY SSF56935 24 384 2.5E-52 T 23-10-2018 DLM_1106 e3b36508c7c971a64ddb899b99bc81bc 384 Gene3D G3DSA:2.40.160.10 12 384 1.9E-70 T 23-10-2018 IPR023614 Porin domain superfamily DLM_2336 176e4e400b47a65c921c3e3a524fdda0 287 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 168 284 7.0E-23 T 23-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal DLM_2336 176e4e400b47a65c921c3e3a524fdda0 287 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 78 150 9.0E-12 T 23-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal DLM_2336 176e4e400b47a65c921c3e3a524fdda0 287 Gene3D G3DSA:3.30.1370.140 167 262 7.1E-26 T 23-10-2018 IPR038527 HupH, C-terminal domain superfamily DLM_2336 176e4e400b47a65c921c3e3a524fdda0 287 Gene3D G3DSA:3.30.1370.140 49 147 2.1E-16 T 23-10-2018 IPR038527 HupH, C-terminal domain superfamily DLM_2336 176e4e400b47a65c921c3e3a524fdda0 287 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 52 153 4.5E-7 T 23-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal DLM_2336 176e4e400b47a65c921c3e3a524fdda0 287 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 168 283 1.1E-38 T 23-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal DLM_3483 c32adb0eb7c0e9b43aab50fcc26d74ae 287 SMART SM00849 43 256 2.6E-10 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3483 c32adb0eb7c0e9b43aab50fcc26d74ae 287 Pfam PF00753 Metallo-beta-lactamase superfamily 42 256 9.5E-15 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3483 c32adb0eb7c0e9b43aab50fcc26d74ae 287 Gene3D G3DSA:3.60.15.10 2 268 5.6E-61 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3483 c32adb0eb7c0e9b43aab50fcc26d74ae 287 SUPERFAMILY SSF56281 4 267 1.3E-29 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_0398 8cc02efc29eab40ebd5ce41d576d8137 286 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0398 8cc02efc29eab40ebd5ce41d576d8137 286 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 14 203 7.2E-80 T 23-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 DLM_0398 8cc02efc29eab40ebd5ce41d576d8137 286 SMART SM00382 30 226 1.3E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0398 8cc02efc29eab40ebd5ce41d576d8137 286 SUPERFAMILY SSF52540 3 231 2.97E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0398 8cc02efc29eab40ebd5ce41d576d8137 286 Gene3D G3DSA:3.40.50.300 1 248 6.0E-68 T 23-10-2018 DLM_0398 8cc02efc29eab40ebd5ce41d576d8137 286 Pfam PF00005 ABC transporter 23 169 6.0E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1434 7fccf54d464588b775d2755a00be8872 866 Gene3D G3DSA:3.30.499.10 361 565 3.8E-74 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 Pfam PF00694 Aconitase C-terminal domain 660 791 2.5E-29 T 23-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 Gene3D G3DSA:3.30.499.20 5 360 1.6E-130 T 23-10-2018 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 162 170 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 360 374 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 138 151 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 205 220 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 281 294 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 469 482 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 191 204 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 407 418 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 PRINTS PR00415 Aconitase family signature 267 280 4.6E-28 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 Gene3D G3DSA:1.10.1440.20 566 622 7.1E-9 T 23-10-2018 DLM_1434 7fccf54d464588b775d2755a00be8872 866 SUPERFAMILY SSF53732 9 592 5.36E-182 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 862 0.0 T 23-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 DLM_1434 7fccf54d464588b775d2755a00be8872 866 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 6.0E-148 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 Gene3D G3DSA:3.20.19.10 623 861 3.9E-81 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DLM_1434 7fccf54d464588b775d2755a00be8872 866 SUPERFAMILY SSF52016 602 860 5.89E-65 T 23-10-2018 DLM_4495 1cc65d947117b019b09dcfc966d3c1eb 97 PIRSF PIRSF020408 1 97 1.1E-34 T 23-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 DLM_4495 1cc65d947117b019b09dcfc966d3c1eb 97 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 3 89 2.4E-12 T 23-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 DLM_4361 d3d71f49aebf19c409701479030b6c6f 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_4361 d3d71f49aebf19c409701479030b6c6f 449 Gene3D G3DSA:3.90.1150.10 13 425 1.6E-150 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_4361 d3d71f49aebf19c409701479030b6c6f 449 SUPERFAMILY SSF53383 12 427 1.46E-120 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_4361 d3d71f49aebf19c409701479030b6c6f 449 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 429 2.3E-162 T 23-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DLM_4361 d3d71f49aebf19c409701479030b6c6f 449 Pfam PF00202 Aminotransferase class-III 25 426 7.2E-117 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_4361 d3d71f49aebf19c409701479030b6c6f 449 PIRSF PIRSF000521 26 434 5.3E-31 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_4361 d3d71f49aebf19c409701479030b6c6f 449 Gene3D G3DSA:3.40.640.10 64 338 1.6E-150 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0695 2e682e1a1e3cbc02d61cf691dd956e1a 653 Gene3D G3DSA:3.40.50.12780 72 523 5.5E-52 T 23-10-2018 DLM_0695 2e682e1a1e3cbc02d61cf691dd956e1a 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 615 6.3E-6 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DLM_0695 2e682e1a1e3cbc02d61cf691dd956e1a 653 SUPERFAMILY SSF56801 38 644 8.24E-120 T 23-10-2018 DLM_0695 2e682e1a1e3cbc02d61cf691dd956e1a 653 Pfam PF00501 AMP-binding enzyme 98 527 1.6E-39 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_0695 2e682e1a1e3cbc02d61cf691dd956e1a 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 271 282 - T 23-10-2018 IPR020845 AMP-binding, conserved site DLM_0695 2e682e1a1e3cbc02d61cf691dd956e1a 653 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 652 1.0E-282 T 23-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 DLM_0695 2e682e1a1e3cbc02d61cf691dd956e1a 653 Gene3D G3DSA:3.30.300.30 526 649 1.2E-14 T 23-10-2018 DLM_1268 47bb8c16128ac83b1c72dc1e5eab189f 187 Pfam PF05069 Phage virion morphogenesis family 7 181 1.1E-26 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_1268 47bb8c16128ac83b1c72dc1e5eab189f 187 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 9 133 2.0E-14 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_4543 7d929669a82c531665ba165fdf4a6c49 183 Pfam PF04264 YceI-like domain 23 177 3.2E-29 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DLM_4543 7d929669a82c531665ba165fdf4a6c49 183 SUPERFAMILY SSF101874 23 178 2.88E-37 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DLM_4543 7d929669a82c531665ba165fdf4a6c49 183 Gene3D G3DSA:2.40.128.110 22 181 1.7E-35 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DLM_4543 7d929669a82c531665ba165fdf4a6c49 183 SMART SM00867 20 180 3.8E-37 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DLM_2378 ef6dc5f8145c7e7e519cd597d529ca2c 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DLM_2378 ef6dc5f8145c7e7e519cd597d529ca2c 506 Gene3D G3DSA:3.40.309.10 266 464 5.5E-161 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_2378 ef6dc5f8145c7e7e519cd597d529ca2c 506 SUPERFAMILY SSF53720 10 498 1.83E-161 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_2378 ef6dc5f8145c7e7e519cd597d529ca2c 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_2378 ef6dc5f8145c7e7e519cd597d529ca2c 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 2.2E-161 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_2378 ef6dc5f8145c7e7e519cd597d529ca2c 506 Gene3D G3DSA:3.40.605.10 23 492 5.5E-161 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0064 8807b62823a765dcc7e7adbfe37facc0 288 PIRSF PIRSF026649 1 288 2.7E-82 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DLM_0064 8807b62823a765dcc7e7adbfe37facc0 288 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 278 2.5E-67 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DLM_1735 118db30902b2c61da5844e82897bd472 315 PIRSF PIRSF005963 4 315 2.2E-131 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DLM_1735 118db30902b2c61da5844e82897bd472 315 SUPERFAMILY SSF102114 44 312 6.54E-66 T 23-10-2018 DLM_1735 118db30902b2c61da5844e82897bd472 315 Gene3D G3DSA:3.20.20.70 46 284 8.5E-19 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1735 118db30902b2c61da5844e82897bd472 315 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 68 1.8E-12 T 23-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DLM_1735 118db30902b2c61da5844e82897bd472 315 TIGRFAM TIGR00510 lipA: lipoyl synthase 28 311 5.2E-132 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DLM_1735 118db30902b2c61da5844e82897bd472 315 SMART SM00729 79 288 1.4E-11 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_1735 118db30902b2c61da5844e82897bd472 315 Hamap MF_00206 Lipoyl synthase [lipA]. 1 315 159.421 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DLM_1735 118db30902b2c61da5844e82897bd472 315 Pfam PF04055 Radical SAM superfamily 86 246 1.2E-13 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 Gene3D G3DSA:3.30.9.50 80 269 4.1E-112 T 23-10-2018 DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 23-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 Gene3D G3DSA:3.50.50.60 5 338 4.1E-112 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 SUPERFAMILY SSF51905 4 384 2.23E-60 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 6.4E-129 T 23-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 Pfam PF01494 FAD binding domain 4 342 9.6E-30 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 7.4E-21 T 23-10-2018 DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 7.4E-21 T 23-10-2018 DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 7.4E-21 T 23-10-2018 DLM_3157 5831dd4d65979a5f1902cd6525c700bc 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 7.4E-21 T 23-10-2018 DLM_4168 c4eabf6b88056788a1c15df36690d192 304 Gene3D G3DSA:3.40.50.150 3 194 3.1E-30 T 23-10-2018 DLM_4168 c4eabf6b88056788a1c15df36690d192 304 SUPERFAMILY SSF53335 13 275 4.6E-36 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4168 c4eabf6b88056788a1c15df36690d192 304 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 15 275 1.8E-72 T 23-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 DLM_4168 c4eabf6b88056788a1c15df36690d192 304 Pfam PF08241 Methyltransferase domain 52 158 1.9E-21 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DLM_4168 c4eabf6b88056788a1c15df36690d192 304 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 7 275 32.536 T 23-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 SUPERFAMILY SSF51726 5 389 3.4E-109 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 PIRSF PIRSF000382 1 758 0.0 T 23-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 754 0.0 T 23-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 427 750 1.7E-147 T 23-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 Gene3D G3DSA:3.20.20.210 385 752 0.0 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 310 2.1E-123 T 23-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 Gene3D G3DSA:3.20.20.210 7 520 0.0 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 754 36.49 T 23-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DLM_3086 1ff9cb4abcb55f426e87e9280a467363 760 SUPERFAMILY SSF51726 392 754 1.31E-113 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DLM_1723 23318e900fbcdf55278231ec777b60af 553 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 553 3.7E-303 T 23-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 DLM_1723 23318e900fbcdf55278231ec777b60af 553 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 11 553 2.1E-292 T 23-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 DLM_1723 23318e900fbcdf55278231ec777b60af 553 Gene3D G3DSA:3.40.1080.10 37 241 3.1E-17 T 23-10-2018 DLM_1723 23318e900fbcdf55278231ec777b60af 553 SUPERFAMILY SSF100950 233 492 4.19E-21 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_1723 23318e900fbcdf55278231ec777b60af 553 SUPERFAMILY SSF100950 41 282 2.23E-34 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 SUPERFAMILY SSF55961 166 415 8.63E-50 T 23-10-2018 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 1.5E-25 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 1.5E-25 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 64 79 1.5E-25 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 183 205 1.5E-25 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 1.5E-25 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 145 171 1.5E-25 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 Pfam PF00355 Rieske [2Fe-2S] domain 49 127 1.1E-19 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 SUPERFAMILY SSF50022 19 160 1.57E-47 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 Gene3D G3DSA:3.90.380.10 21 411 5.2E-162 T 23-10-2018 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 Gene3D G3DSA:2.102.10.10 47 166 5.2E-162 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_3253 d06e34e7fc3e33480e6725176f8eeb7b 421 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 183 413 3.6E-46 T 23-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 DLM_4009 dbbdf7655e583007b4833702f1fb700d 119 Gene3D G3DSA:3.10.180.10 4 118 2.1E-18 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_4009 dbbdf7655e583007b4833702f1fb700d 119 SUPERFAMILY SSF54593 4 117 1.0E-14 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_4009 dbbdf7655e583007b4833702f1fb700d 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 112 1.3E-4 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_2434 48b36e46f55753641f6430d1ea953cec 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 6.2E-9 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2434 48b36e46f55753641f6430d1ea953cec 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 6.2E-9 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2434 48b36e46f55753641f6430d1ea953cec 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 6.2E-9 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2434 48b36e46f55753641f6430d1ea953cec 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 6.2E-9 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2434 48b36e46f55753641f6430d1ea953cec 262 Pfam PF00561 alpha/beta hydrolase fold 23 248 2.1E-20 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2434 48b36e46f55753641f6430d1ea953cec 262 Gene3D G3DSA:3.40.50.1820 2 261 1.0E-57 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2434 48b36e46f55753641f6430d1ea953cec 262 SUPERFAMILY SSF53474 1 261 1.61E-54 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.9E-46 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3879 3bea98a211fef8248ab2def087550663 347 Pfam PF13416 Bacterial extracellular solute-binding protein 40 314 2.9E-31 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_3879 3bea98a211fef8248ab2def087550663 347 Gene3D G3DSA:3.40.190.10 27 317 1.9E-105 T 23-10-2018 DLM_3879 3bea98a211fef8248ab2def087550663 347 Gene3D G3DSA:3.40.190.10 129 343 1.9E-105 T 23-10-2018 DLM_3879 3bea98a211fef8248ab2def087550663 347 SUPERFAMILY SSF53850 24 346 1.05E-79 T 23-10-2018 DLM_3879 3bea98a211fef8248ab2def087550663 347 PIRSF PIRSF019574 2 347 2.7E-114 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 SUPERFAMILY SSF46626 62 137 1.17E-18 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 Gene3D G3DSA:1.10.760.10 62 140 1.7E-31 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 Gene3D G3DSA:1.10.760.10 153 240 8.3E-30 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 164 235 2.4E-17 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 63 137 9.4E-16 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 PRINTS PR00607 Class IE cytochrome C signature 73 84 1.7E-15 T 23-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 PRINTS PR00607 Class IE cytochrome C signature 127 138 1.7E-15 T 23-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 PRINTS PR00607 Class IE cytochrome C signature 84 94 1.7E-15 T 23-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 PRINTS PR00607 Class IE cytochrome C signature 112 124 1.7E-15 T 23-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 DLM_3418 dbaed23ad742905fb6613cc749789df2 240 SUPERFAMILY SSF46626 163 237 3.2E-16 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 Gene3D G3DSA:3.40.50.170 1 203 7.7E-78 T 23-10-2018 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 SUPERFAMILY SSF50486 202 304 1.43E-27 T 23-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 23-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 SUPERFAMILY SSF53328 1 204 1.22E-62 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 297 4.6E-89 T 23-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 299 36.236 T 23-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 Pfam PF02911 Formyl transferase, C-terminal domain 201 296 1.0E-22 T 23-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 Gene3D G3DSA:3.10.25.10 204 303 2.7E-27 T 23-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_4311 e6ea0566e3cb3587fb70160df72a560a 305 Pfam PF00551 Formyl transferase 2 179 9.2E-45 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DLM_2980 2f7dd4548daa5f86d0594aa74ef858b4 200 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 27 7.7E-5 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_2980 2f7dd4548daa5f86d0594aa74ef858b4 200 Gene3D G3DSA:3.30.700.10 8 196 2.2E-10 T 23-10-2018 DLM_2980 2f7dd4548daa5f86d0594aa74ef858b4 200 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_2980 2f7dd4548daa5f86d0594aa74ef858b4 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 4.9E-5 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_2980 2f7dd4548daa5f86d0594aa74ef858b4 200 SUPERFAMILY SSF54523 8 112 1.49E-14 T 23-10-2018 DLM_2980 2f7dd4548daa5f86d0594aa74ef858b4 200 Pfam PF12019 Type II transport protein GspH 43 182 2.4E-10 T 23-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 DLM_2929 18823f6a98efa2185ab6243eca219bbd 407 Gene3D G3DSA:3.30.70.270 219 398 1.8E-52 T 23-10-2018 DLM_2929 18823f6a98efa2185ab6243eca219bbd 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 230 398 3.9E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_2929 18823f6a98efa2185ab6243eca219bbd 407 SUPERFAMILY SSF55073 239 399 5.65E-43 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2929 18823f6a98efa2185ab6243eca219bbd 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 235 395 2.0E-44 T 23-10-2018 IPR000160 GGDEF domain DLM_2929 18823f6a98efa2185ab6243eca219bbd 407 SMART SM00267 223 399 8.2E-57 T 23-10-2018 IPR000160 GGDEF domain DLM_4433 232511828d8f7b3eea7bc09e878e8e80 313 Gene3D G3DSA:3.40.50.2300 144 280 3.0E-92 T 23-10-2018 DLM_4433 232511828d8f7b3eea7bc09e878e8e80 313 Gene3D G3DSA:3.40.50.2300 49 300 3.0E-92 T 23-10-2018 DLM_4433 232511828d8f7b3eea7bc09e878e8e80 313 Pfam PF13407 Periplasmic binding protein domain 46 298 4.5E-68 T 23-10-2018 IPR025997 Periplasmic binding protein DLM_4433 232511828d8f7b3eea7bc09e878e8e80 313 SUPERFAMILY SSF53822 31 311 3.53E-90 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 Gene3D G3DSA:3.40.50.1820 4 643 9.3E-140 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 Gene3D G3DSA:2.130.10.120 54 409 9.3E-140 T 23-10-2018 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 449 467 1.3E-41 T 23-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 523 1.3E-41 T 23-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 476 500 1.3E-41 T 23-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 1.3E-41 T 23-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 589 604 1.3E-41 T 23-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 534 554 1.3E-41 T 23-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 Pfam PF00326 Prolyl oligopeptidase family 472 675 1.1E-47 T 23-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 SUPERFAMILY SSF50993 4 414 4.18E-47 T 23-10-2018 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 408 6.0E-33 T 23-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 DLM_4222 9396df6ba7eee7a36e5980a04f7bb7ba 677 SUPERFAMILY SSF53474 419 671 3.37E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0561 bdc6d989ef3b92d8d47c1ee0079bce96 305 Pfam PF01261 Xylose isomerase-like TIM barrel 35 247 7.7E-25 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DLM_0561 bdc6d989ef3b92d8d47c1ee0079bce96 305 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 293 4.2E-125 T 23-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 DLM_0561 bdc6d989ef3b92d8d47c1ee0079bce96 305 SUPERFAMILY SSF51658 8 287 2.07E-58 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_0561 bdc6d989ef3b92d8d47c1ee0079bce96 305 Gene3D G3DSA:3.20.20.150 3 293 7.5E-74 T 23-10-2018 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 Gene3D G3DSA:1.10.3930.10 69 149 2.6E-148 T 23-10-2018 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 Hamap MF_00242 Arginine deiminase [arcA]. 2 409 47.536 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 Pfam PF02274 Amidinotransferase 19 406 2.4E-105 T 23-10-2018 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 PRINTS PR01466 Bacterial arginine deiminase signature 365 379 9.0E-48 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 PRINTS PR01466 Bacterial arginine deiminase signature 345 362 9.0E-48 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 9.0E-48 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 PRINTS PR01466 Bacterial arginine deiminase signature 150 168 9.0E-48 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 PRINTS PR01466 Bacterial arginine deiminase signature 388 406 9.0E-48 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 PRINTS PR01466 Bacterial arginine deiminase signature 178 193 9.0E-48 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 Gene3D G3DSA:3.75.10.10 7 406 2.6E-148 T 23-10-2018 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 PIRSF PIRSF006356 1 409 4.4E-132 T 23-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DLM_0118 dd5df0f3d3e5c570c751593199646a07 411 SUPERFAMILY SSF55909 4 409 1.96E-134 T 23-10-2018 DLM_2341 b0469a2c0c09a2b194a87f87da6d3b8a 354 Gene3D G3DSA:3.40.50.300 123 334 1.2E-61 T 23-10-2018 DLM_2341 b0469a2c0c09a2b194a87f87da6d3b8a 354 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 115 324 1.2E-88 T 23-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 DLM_2341 b0469a2c0c09a2b194a87f87da6d3b8a 354 PIRSF PIRSF005624 107 339 3.2E-96 T 23-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 DLM_2341 b0469a2c0c09a2b194a87f87da6d3b8a 354 SUPERFAMILY SSF52540 114 330 1.73E-33 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2341 b0469a2c0c09a2b194a87f87da6d3b8a 354 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 143 305 1.5E-34 T 23-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DLM_0669 ded43148eeda362672438e697ce4fe09 103 Pfam PF04341 Protein of unknown function, DUF485 10 99 2.1E-33 T 23-10-2018 IPR007436 Protein of unknown function DUF485 DLM_3183 d1b694a8e17f89f7e13e837cc01e163c 212 Pfam PF04367 Protein of unknown function (DUF502) 59 164 1.0E-33 T 23-10-2018 IPR007462 Protein of unknown function DUF502 DLM_2510 c7b04822eb6a6be13954df5034b59c49 202 SMART SM00479 29 202 8.3E-25 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_2510 c7b04822eb6a6be13954df5034b59c49 202 Pfam PF00929 Exonuclease 31 189 1.3E-17 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_2510 c7b04822eb6a6be13954df5034b59c49 202 SUPERFAMILY SSF53098 30 201 8.07E-30 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_2510 c7b04822eb6a6be13954df5034b59c49 202 Gene3D G3DSA:3.30.420.10 22 200 5.4E-30 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0809 8696c215cce41bf219ca91a69abc9b12 252 SUPERFAMILY SSF51735 10 245 2.14E-47 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0809 8696c215cce41bf219ca91a69abc9b12 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.2E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0809 8696c215cce41bf219ca91a69abc9b12 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.2E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0809 8696c215cce41bf219ca91a69abc9b12 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.2E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0809 8696c215cce41bf219ca91a69abc9b12 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.2E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0809 8696c215cce41bf219ca91a69abc9b12 252 Pfam PF00106 short chain dehydrogenase 14 207 3.9E-34 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0809 8696c215cce41bf219ca91a69abc9b12 252 Gene3D G3DSA:3.40.50.720 3 248 5.3E-52 T 23-10-2018 DLM_0693 4d389c4d7837c8f61222a316a6692fbd 551 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 72 232 4.8E-6 T 23-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like DLM_2409 b6715bc897cb444c5fb8c0df0a51cae4 107 Pfam PF02699 Preprotein translocase subunit 20 96 7.3E-30 T 23-10-2018 IPR003849 Preprotein translocase YajC DLM_2409 b6715bc897cb444c5fb8c0df0a51cae4 107 SMART SM01323 17 99 9.1E-41 T 23-10-2018 IPR003849 Preprotein translocase YajC DLM_2409 b6715bc897cb444c5fb8c0df0a51cae4 107 PRINTS PR01853 Bacterial YajC preprotein translocase signature 39 57 3.8E-15 T 23-10-2018 IPR003849 Preprotein translocase YajC DLM_2409 b6715bc897cb444c5fb8c0df0a51cae4 107 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 3.8E-15 T 23-10-2018 IPR003849 Preprotein translocase YajC DLM_2409 b6715bc897cb444c5fb8c0df0a51cae4 107 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 96 2.3E-28 T 23-10-2018 IPR003849 Preprotein translocase YajC DLM_1805 8519844573fcc1b76fbf29f6032ac906 231 Gene3D G3DSA:3.50.30.100 4 211 1.7E-52 T 23-10-2018 DLM_1805 8519844573fcc1b76fbf29f6032ac906 231 Pfam PF03737 Aldolase/RraA 26 187 1.7E-30 T 23-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DLM_1805 8519844573fcc1b76fbf29f6032ac906 231 SUPERFAMILY SSF89562 26 198 7.72E-33 T 23-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DLM_0955 4c46767cfa4d9897c6b4b69d89f299f2 288 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 145 158 9.0E-14 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DLM_0955 4c46767cfa4d9897c6b4b69d89f299f2 288 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 9.0E-14 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DLM_0955 4c46767cfa4d9897c6b4b69d89f299f2 288 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 134 9.0E-14 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DLM_0955 4c46767cfa4d9897c6b4b69d89f299f2 288 Gene3D G3DSA:3.40.710.10 15 285 1.2E-67 T 23-10-2018 DLM_0955 4c46767cfa4d9897c6b4b69d89f299f2 288 SUPERFAMILY SSF56601 1 278 6.38E-61 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DLM_0955 4c46767cfa4d9897c6b4b69d89f299f2 288 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 261 4.3E-57 T 23-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DLM_2734 1c1d074986d3843ae7352939ba05d4dc 417 Pfam PF07690 Major Facilitator Superfamily 17 366 2.3E-35 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2734 1c1d074986d3843ae7352939ba05d4dc 417 Gene3D G3DSA:1.20.1250.20 191 411 2.1E-49 T 23-10-2018 DLM_2734 1c1d074986d3843ae7352939ba05d4dc 417 Gene3D G3DSA:1.20.1250.20 5 185 4.7E-43 T 23-10-2018 DLM_2734 1c1d074986d3843ae7352939ba05d4dc 417 SUPERFAMILY SSF103473 4 407 1.28E-56 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_4418 45d5355b43e37fea574853b377d745d0 112 Gene3D G3DSA:3.90.1030.10 1 96 5.5E-37 T 23-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4418 45d5355b43e37fea574853b377d745d0 112 TIGRFAM TIGR00059 L17: ribosomal protein bL17 1 98 1.5E-35 T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4418 45d5355b43e37fea574853b377d745d0 112 SUPERFAMILY SSF64263 1 99 5.76E-40 T 23-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4418 45d5355b43e37fea574853b377d745d0 112 ProSitePatterns PS01167 Ribosomal protein L17 signature. 15 37 - T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4418 45d5355b43e37fea574853b377d745d0 112 Pfam PF01196 Ribosomal protein L17 1 97 1.6E-32 T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_1806 bcd249a3e9a6803a9cdd4af77dd46305 159 Pfam PF07729 FCD domain 18 142 6.0E-23 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1806 bcd249a3e9a6803a9cdd4af77dd46305 159 Gene3D G3DSA:1.20.120.530 15 155 1.0E-25 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1806 bcd249a3e9a6803a9cdd4af77dd46305 159 SUPERFAMILY SSF48008 17 150 9.94E-24 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_1806 bcd249a3e9a6803a9cdd4af77dd46305 159 SMART SM00895 18 143 7.9E-21 T 23-10-2018 IPR011711 GntR, C-terminal DLM_1807 ad5fb486beefd0394d4343188491c206 270 Gene3D G3DSA:3.90.226.10 2 212 7.0E-69 T 23-10-2018 DLM_1807 ad5fb486beefd0394d4343188491c206 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 1.9E-49 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_1807 ad5fb486beefd0394d4343188491c206 270 Gene3D G3DSA:1.10.12.10 213 266 3.9E-26 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DLM_1807 ad5fb486beefd0394d4343188491c206 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DLM_1807 ad5fb486beefd0394d4343188491c206 270 SUPERFAMILY SSF52096 1 269 7.39E-80 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_4290 9526f718335352b4a4f61e048f10f479 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 374 5.9E-34 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DLM_4290 9526f718335352b4a4f61e048f10f479 376 SUPERFAMILY SSF56645 5 235 6.54E-69 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_4290 9526f718335352b4a4f61e048f10f479 376 Gene3D G3DSA:2.40.110.10 118 231 3.9E-37 T 23-10-2018 DLM_4290 9526f718335352b4a4f61e048f10f479 376 Gene3D G3DSA:1.10.540.10 2 116 4.7E-28 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_4290 9526f718335352b4a4f61e048f10f479 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 214 2.7E-24 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_4290 9526f718335352b4a4f61e048f10f479 376 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 121 133 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DLM_4290 9526f718335352b4a4f61e048f10f479 376 Gene3D G3DSA:1.20.140.10 232 376 1.1E-36 T 23-10-2018 DLM_4290 9526f718335352b4a4f61e048f10f479 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 114 2.2E-26 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_4290 9526f718335352b4a4f61e048f10f479 376 SUPERFAMILY SSF47203 228 373 9.02E-38 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_2027 a1cb68972d37f9864e9656bcb978bc7d 606 Gene3D G3DSA:3.90.1150.10 209 598 1.2E-167 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2027 a1cb68972d37f9864e9656bcb978bc7d 606 Gene3D G3DSA:3.40.640.10 237 497 1.2E-167 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2027 a1cb68972d37f9864e9656bcb978bc7d 606 SUPERFAMILY SSF53383 204 605 2.55E-126 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2027 a1cb68972d37f9864e9656bcb978bc7d 606 Pfam PF00266 Aminotransferase class-V 226 595 9.2E-146 T 23-10-2018 IPR000192 Aminotransferase class V domain DLM_2027 a1cb68972d37f9864e9656bcb978bc7d 606 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 208 602 3.3E-171 T 23-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DLM_4135 1e23131e8eabfc5298d6768da9d15855 624 Pfam PF00773 RNB domain 237 461 1.5E-30 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DLM_4135 1e23131e8eabfc5298d6768da9d15855 624 Pfam PF00773 RNB domain 460 506 2.0E-8 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DLM_4135 1e23131e8eabfc5298d6768da9d15855 624 SUPERFAMILY SSF50249 227 551 3.54E-74 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_4135 1e23131e8eabfc5298d6768da9d15855 624 SMART SM00955 234 507 1.5E-63 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DLM_2576 e8c8396caac56c5bff34bdd9829be99a 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 112 7.8E-31 T 23-10-2018 IPR006504 Transcriptional regulator Spx/MgsR DLM_2576 e8c8396caac56c5bff34bdd9829be99a 116 Gene3D G3DSA:3.40.30.10 1 115 8.8E-43 T 23-10-2018 DLM_2576 e8c8396caac56c5bff34bdd9829be99a 116 SUPERFAMILY SSF52833 1 114 5.79E-33 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_2576 e8c8396caac56c5bff34bdd9829be99a 116 Pfam PF03960 ArsC family 5 111 1.7E-16 T 23-10-2018 IPR006660 Arsenate reductase-like DLM_1519 d582c41a7036048071e9de1d61047520 410 SUPERFAMILY SSF47203 246 407 8.38E-24 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_1519 d582c41a7036048071e9de1d61047520 410 PIRSF PIRSF016578 6 403 3.4E-36 T 23-10-2018 DLM_1519 d582c41a7036048071e9de1d61047520 410 SUPERFAMILY SSF56645 31 232 2.36E-46 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_1519 d582c41a7036048071e9de1d61047520 410 Gene3D G3DSA:1.10.540.10 26 131 4.6E-23 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_1519 d582c41a7036048071e9de1d61047520 410 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 27 123 4.7E-11 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_1519 d582c41a7036048071e9de1d61047520 410 Gene3D G3DSA:1.20.140.10 233 407 1.9E-55 T 23-10-2018 DLM_1519 d582c41a7036048071e9de1d61047520 410 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 19 409 6.3E-184 T 23-10-2018 IPR023922 Sulphate-starvation-induced SfnB DLM_1519 d582c41a7036048071e9de1d61047520 410 Gene3D G3DSA:2.40.110.10 134 232 1.7E-30 T 23-10-2018 DLM_1519 d582c41a7036048071e9de1d61047520 410 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 251 385 3.6E-21 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 4.4E-69 T 23-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 SUPERFAMILY SSF53223 3 122 9.59E-40 T 23-10-2018 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 Gene3D G3DSA:3.40.50.720 6 259 1.4E-108 T 23-10-2018 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 SUPERFAMILY SSF51735 123 280 1.16E-51 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.5E-83 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.5E-83 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.5E-83 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.5E-83 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.5E-83 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.5E-83 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.5E-83 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.46 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 23-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 Gene3D G3DSA:3.40.50.10860 8 276 1.4E-108 T 23-10-2018 DLM_2612 d5f3e208e5c9a1ef9a019dc7f13ec97c 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.4E-39 T 23-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DLM_3745 480050750a02203c94f3ddb6b35acb49 353 ProSitePatterns PS00958 Transaldolase active site. 137 154 - T 23-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DLM_3745 480050750a02203c94f3ddb6b35acb49 353 Gene3D G3DSA:3.20.20.70 1 352 9.5E-141 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3745 480050750a02203c94f3ddb6b35acb49 353 TIGRFAM TIGR00876 tal_mycobact: transaldolase 14 350 6.0E-88 T 23-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DLM_3745 480050750a02203c94f3ddb6b35acb49 353 Hamap MF_00493 Transaldolase [tal]. 1 353 125.376 T 23-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DLM_3745 480050750a02203c94f3ddb6b35acb49 353 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 350 6.9E-79 T 23-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DLM_3745 480050750a02203c94f3ddb6b35acb49 353 SUPERFAMILY SSF51569 1 351 4.03E-69 T 23-10-2018 DLM_3745 480050750a02203c94f3ddb6b35acb49 353 PIRSF PIRSF036915 1 353 9.8E-130 T 23-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DLM_3745 480050750a02203c94f3ddb6b35acb49 353 ProSitePatterns PS01054 Transaldolase signature 1. 40 48 - T 23-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 Gene3D G3DSA:1.20.5.1150 16 54 6.5E-20 T 23-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.4E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.4E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.4E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.4E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 Pfam PF01165 Ribosomal protein S21 4 57 6.9E-21 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 57 3.0E-16 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.773 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0132 12083886b9cc4288e80b0e24a97c0058 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.7E-23 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_0396 274901ffb8c88ffcd87f88c7ab1d6cc6 96 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 96 38.414 T 23-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 DLM_0396 274901ffb8c88ffcd87f88c7ab1d6cc6 96 Pfam PF02553 Cobalt transport protein component CbiN 9 72 2.1E-29 T 23-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 DLM_0396 274901ffb8c88ffcd87f88c7ab1d6cc6 96 TIGRFAM TIGR01165 cbiN: cobalt transport protein 7 87 3.7E-36 T 23-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 DLM_2619 7910869e558a8776c9532b1fea78e887 284 PIRSF PIRSF006232 6 284 7.8E-97 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DLM_2619 7910869e558a8776c9532b1fea78e887 284 SUPERFAMILY SSF51182 12 284 4.63E-86 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2619 7910869e558a8776c9532b1fea78e887 284 Gene3D G3DSA:2.60.120.10 21 281 3.0E-97 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2619 7910869e558a8776c9532b1fea78e887 284 Pfam PF05726 Pirin C-terminal cupin domain 180 284 4.2E-31 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DLM_2619 7910869e558a8776c9532b1fea78e887 284 Gene3D G3DSA:2.60.120.10 147 254 3.0E-97 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2619 7910869e558a8776c9532b1fea78e887 284 Pfam PF02678 Pirin 26 125 3.8E-37 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DLM_1910 b442eb43caff9baf3d930148cc9b7671 226 Gene3D G3DSA:1.10.3720.10 7 218 2.2E-52 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1910 b442eb43caff9baf3d930148cc9b7671 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 110 2.9E-30 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_1910 b442eb43caff9baf3d930148cc9b7671 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 215 1.4E-19 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1910 b442eb43caff9baf3d930148cc9b7671 226 SUPERFAMILY SSF161098 14 201 3.14E-45 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3669 dfce1eb6ecb61c3d8706d0e9ef6a27c0 259 PIRSF PIRSF009320 1 79 4.6E-16 T 23-10-2018 DLM_3669 dfce1eb6ecb61c3d8706d0e9ef6a27c0 259 PIRSF PIRSF009320 89 253 2.6E-7 T 23-10-2018 DLM_3669 dfce1eb6ecb61c3d8706d0e9ef6a27c0 259 Pfam PF13614 AAA domain 1 175 1.0E-61 T 23-10-2018 IPR025669 AAA domain DLM_3669 dfce1eb6ecb61c3d8706d0e9ef6a27c0 259 SUPERFAMILY SSF52540 1 254 7.1E-68 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3669 dfce1eb6ecb61c3d8706d0e9ef6a27c0 259 Gene3D G3DSA:3.40.50.300 1 257 6.0E-79 T 23-10-2018 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 SUPERFAMILY SSF56935 21 360 2.32E-56 T 23-10-2018 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 PRINTS PR00184 Neisseria sp. porin signature 310 334 7.2E-25 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 PRINTS PR00184 Neisseria sp. porin signature 193 210 7.2E-25 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 PRINTS PR00184 Neisseria sp. porin signature 58 83 7.2E-25 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 PRINTS PR00184 Neisseria sp. porin signature 270 296 7.2E-25 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 Pfam PF13609 Gram-negative porin 9 337 2.9E-40 T 23-10-2018 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 Gene3D G3DSA:2.40.160.10 8 360 7.5E-74 T 23-10-2018 IPR023614 Porin domain superfamily DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 192 204 3.2E-11 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 164 175 3.2E-11 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 313 330 3.2E-11 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_0080 bee20abab31bd186325a60a9a9d91aba 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 56 67 3.2E-11 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_3957 4f26369bf210712ae16cb8bd49835fe3 118 Gene3D G3DSA:1.10.287.1080 7 114 5.3E-35 T 23-10-2018 DLM_3957 4f26369bf210712ae16cb8bd49835fe3 118 SUPERFAMILY SSF101386 13 112 3.34E-32 T 23-10-2018 DLM_3957 4f26369bf210712ae16cb8bd49835fe3 118 PIRSF PIRSF029826 1 117 5.3E-42 T 23-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 DLM_3957 4f26369bf210712ae16cb8bd49835fe3 118 Pfam PF12643 MazG-like family 41 111 5.3E-10 T 23-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 DLM_3477 55132e209fbdde7d08fa4f6152956e1c 529 Pfam PF00672 HAMP domain 206 243 2.1E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3477 55132e209fbdde7d08fa4f6152956e1c 529 SUPERFAMILY SSF58104 216 525 1.23E-53 T 23-10-2018 DLM_3477 55132e209fbdde7d08fa4f6152956e1c 529 Gene3D G3DSA:1.10.287.950 197 526 1.3E-56 T 23-10-2018 DLM_3477 55132e209fbdde7d08fa4f6152956e1c 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 2.2E-33 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3477 55132e209fbdde7d08fa4f6152956e1c 529 SMART SM00283 263 517 1.8E-30 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3477 55132e209fbdde7d08fa4f6152956e1c 529 SMART SM00304 196 248 5.8E-8 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4266 2d67ee40af7f0519cdf25f56f9b3a31c 717 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 269 1.2E-73 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DLM_4266 2d67ee40af7f0519cdf25f56f9b3a31c 717 Gene3D G3DSA:1.10.10.160 112 185 1.2E-91 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily DLM_4266 2d67ee40af7f0519cdf25f56f9b3a31c 717 Gene3D G3DSA:3.40.50.300 8 270 1.2E-91 T 23-10-2018 DLM_4266 2d67ee40af7f0519cdf25f56f9b3a31c 717 Gene3D G3DSA:3.40.50.300 278 622 3.2E-121 T 23-10-2018 DLM_4266 2d67ee40af7f0519cdf25f56f9b3a31c 717 Gene3D G3DSA:1.10.486.10 380 535 3.2E-121 T 23-10-2018 DLM_4266 2d67ee40af7f0519cdf25f56f9b3a31c 717 SUPERFAMILY SSF52540 2 630 3.22E-173 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4266 2d67ee40af7f0519cdf25f56f9b3a31c 717 Pfam PF13361 UvrD-like helicase C-terminal domain 275 605 5.0E-71 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 330 408 1.1E-19 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 SMART SM00928 326 371 6.2E-11 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 SUPERFAMILY SSF142984 238 321 5.62E-22 T 23-10-2018 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 Gene3D G3DSA:1.20.1440.230 324 415 5.2E-18 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 Gene3D G3DSA:3.10.20.600 229 322 2.9E-27 T 23-10-2018 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 45 216 1.2E-39 T 23-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 Pfam PF10531 SLBB domain 241 286 1.7E-10 T 23-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 Gene3D G3DSA:3.40.50.11540 50 228 6.6E-65 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 SUPERFAMILY SSF142019 18 237 6.15E-61 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_1706 9ab20132351dbecffe0c107fae6dcf1c 416 SUPERFAMILY SSF140490 324 408 5.1E-21 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2471 6d1ba5d32414bd1bdd7f1a8ebc428057 136 PIRSF PIRSF016821 11 136 2.2E-40 T 23-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 DLM_2471 6d1ba5d32414bd1bdd7f1a8ebc428057 136 Pfam PF01479 S4 domain 14 60 1.5E-13 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_2471 6d1ba5d32414bd1bdd7f1a8ebc428057 136 SUPERFAMILY SSF55174 13 106 7.2E-26 T 23-10-2018 DLM_2471 6d1ba5d32414bd1bdd7f1a8ebc428057 136 Gene3D G3DSA:3.10.290.10 6 112 3.4E-32 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_2471 6d1ba5d32414bd1bdd7f1a8ebc428057 136 SMART SM00363 14 77 7.4E-11 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_2967 e0c40d6767979ebd08ae8b9fd66529c9 220 SMART SM00862 144 219 2.4E-23 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_2967 e0c40d6767979ebd08ae8b9fd66529c9 220 Pfam PF00072 Response regulator receiver domain 3 111 2.9E-22 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2967 e0c40d6767979ebd08ae8b9fd66529c9 220 SUPERFAMILY SSF52172 1 176 6.14E-36 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2967 e0c40d6767979ebd08ae8b9fd66529c9 220 Gene3D G3DSA:1.10.10.10 122 220 9.6E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2967 e0c40d6767979ebd08ae8b9fd66529c9 220 SMART SM00448 1 111 2.4E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2967 e0c40d6767979ebd08ae8b9fd66529c9 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 1.7E-24 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_2967 e0c40d6767979ebd08ae8b9fd66529c9 220 Gene3D G3DSA:3.40.50.2300 1 119 8.1E-31 T 23-10-2018 DLM_0373 418d3480b19ab4c11cd6978d146ebebe 531 SUPERFAMILY SSF103473 73 527 2.62E-41 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0373 418d3480b19ab4c11cd6978d146ebebe 531 Gene3D G3DSA:1.20.1250.20 75 530 2.2E-129 T 23-10-2018 DLM_0373 418d3480b19ab4c11cd6978d146ebebe 531 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 220 232 - T 23-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 DLM_0373 418d3480b19ab4c11cd6978d146ebebe 531 Pfam PF00854 POT family 308 482 4.1E-35 T 23-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 DLM_0373 418d3480b19ab4c11cd6978d146ebebe 531 Pfam PF00854 POT family 149 278 1.1E-30 T 23-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 DLM_0373 418d3480b19ab4c11cd6978d146ebebe 531 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 303 526 5.7E-49 T 23-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 DLM_0373 418d3480b19ab4c11cd6978d146ebebe 531 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 78 287 7.6E-54 T 23-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 DLM_1478 460aea22c2a5085daf7bd6bf2535524f 461 SMART SM00833 315 430 4.9E-52 T 23-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DLM_1478 460aea22c2a5085daf7bd6bf2535524f 461 Gene3D G3DSA:3.40.50.300 61 288 1.2E-74 T 23-10-2018 DLM_1478 460aea22c2a5085daf7bd6bf2535524f 461 SUPERFAMILY SSF52540 51 375 4.43E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1478 460aea22c2a5085daf7bd6bf2535524f 461 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 315 430 3.7E-30 T 23-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DLM_1478 460aea22c2a5085daf7bd6bf2535524f 461 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 64 269 7.6E-60 T 23-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DLM_2443 ba8ad7dd1b27c4d253ea7b9f1bd10b13 246 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DLM_2443 ba8ad7dd1b27c4d253ea7b9f1bd10b13 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.0E-32 T 23-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DLM_2443 ba8ad7dd1b27c4d253ea7b9f1bd10b13 246 Pfam PF00460 Flagella basal body rod protein 5 35 1.7E-4 T 23-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DLM_2443 ba8ad7dd1b27c4d253ea7b9f1bd10b13 246 SUPERFAMILY SSF117143 78 204 2.62E-18 T 23-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DLM_2443 ba8ad7dd1b27c4d253ea7b9f1bd10b13 246 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 6.4E-19 T 23-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DLM_1151 e14ea12c321e9bdb228cf370d2e501ea 137 SUPERFAMILY SSF158682 5 133 3.92E-13 T 23-10-2018 IPR029024 TerB-like DLM_1151 e14ea12c321e9bdb228cf370d2e501ea 137 Gene3D G3DSA:1.10.3680.10 4 135 1.6E-18 T 23-10-2018 IPR029024 TerB-like DLM_3103 8c8bc9ae4ec8f8f9d8f15fc6acb81174 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 346 362 1.2E-28 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_3103 8c8bc9ae4ec8f8f9d8f15fc6acb81174 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 399 416 1.2E-28 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_3103 8c8bc9ae4ec8f8f9d8f15fc6acb81174 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 237 1.2E-28 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_3103 8c8bc9ae4ec8f8f9d8f15fc6acb81174 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 296 308 1.2E-28 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_3103 8c8bc9ae4ec8f8f9d8f15fc6acb81174 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 198 212 1.2E-28 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DLM_3103 8c8bc9ae4ec8f8f9d8f15fc6acb81174 419 Gene3D G3DSA:3.40.50.150 115 416 1.6E-78 T 23-10-2018 DLM_3103 8c8bc9ae4ec8f8f9d8f15fc6acb81174 419 SUPERFAMILY SSF53335 116 417 2.39E-65 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3103 8c8bc9ae4ec8f8f9d8f15fc6acb81174 419 Pfam PF01189 16S rRNA methyltransferase RsmB/F 221 414 5.1E-47 T 23-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DLM_0386 05350590a5f3793514d865ab12ecd5f2 215 SMART SM00702 21 205 3.9E-23 T 23-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 DLM_0386 05350590a5f3793514d865ab12ecd5f2 215 Gene3D G3DSA:2.60.120.620 11 209 3.7E-58 T 23-10-2018 DLM_0386 05350590a5f3793514d865ab12ecd5f2 215 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 114 205 8.2E-21 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DLM_0124 dabb835ec2000bd03d0e32bd1b14e8b0 276 Pfam PF08006 Protein of unknown function (DUF1700) 1 125 1.1E-28 T 23-10-2018 IPR012963 Protein of unknown function DUF1700 DLM_1177 3b799fc26a95aeece6056cc80706f42c 145 Gene3D G3DSA:1.20.120.10 18 142 3.5E-32 T 23-10-2018 DLM_1177 3b799fc26a95aeece6056cc80706f42c 145 PIRSF PIRSF000027 4 143 1.5E-36 T 23-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 DLM_1177 3b799fc26a95aeece6056cc80706f42c 145 SUPERFAMILY SSF47175 20 141 2.65E-33 T 23-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 DLM_1177 3b799fc26a95aeece6056cc80706f42c 145 Pfam PF01322 Cytochrome C' 24 141 7.7E-34 T 23-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 DLM_0784 84c1cf0273fa05a9570860ae04c049d5 183 Pfam PF05069 Phage virion morphogenesis family 14 162 1.2E-12 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_0983 10b643771d1fd89042001a494b88d9d1 166 SUPERFAMILY SSF55729 1 153 4.43E-23 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_0983 10b643771d1fd89042001a494b88d9d1 166 Pfam PF13673 Acetyltransferase (GNAT) domain 49 141 1.1E-10 T 23-10-2018 IPR000182 GNAT domain DLM_0983 10b643771d1fd89042001a494b88d9d1 166 Gene3D G3DSA:3.40.630.30 1 157 1.1E-28 T 23-10-2018 DLM_0226 336983d3a55c830b6b4fec220d22da17 307 Gene3D G3DSA:3.40.50.720 91 273 4.1E-107 T 23-10-2018 DLM_0226 336983d3a55c830b6b4fec220d22da17 307 SUPERFAMILY SSF51735 94 273 1.65E-45 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0226 336983d3a55c830b6b4fec220d22da17 307 Gene3D G3DSA:3.40.50.720 13 307 4.1E-107 T 23-10-2018 DLM_0226 336983d3a55c830b6b4fec220d22da17 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 272 7.5E-45 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DLM_3188 96fc10f1556f3c47a4352d5bdca18619 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.3E-25 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3188 96fc10f1556f3c47a4352d5bdca18619 87 Gene3D G3DSA:1.20.58.110 1 87 1.2E-26 T 23-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3188 96fc10f1556f3c47a4352d5bdca18619 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 4.0E-31 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3188 96fc10f1556f3c47a4352d5bdca18619 87 Pfam PF01649 Ribosomal protein S20 2 84 6.3E-24 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3188 96fc10f1556f3c47a4352d5bdca18619 87 SUPERFAMILY SSF46992 3 86 2.22E-28 T 23-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3188 96fc10f1556f3c47a4352d5bdca18619 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.083 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3497 cbf7f1e3ab22c4ee97ae5473f021b23f 237 Gene3D G3DSA:1.10.3720.10 8 229 1.3E-42 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3497 cbf7f1e3ab22c4ee97ae5473f021b23f 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 220 6.1E-13 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3497 cbf7f1e3ab22c4ee97ae5473f021b23f 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 3.5E-14 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_3497 cbf7f1e3ab22c4ee97ae5473f021b23f 237 SUPERFAMILY SSF161098 17 214 6.93E-36 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4308 c96aa53644937afeb877eb87b9634097 360 Gene3D G3DSA:3.40.50.450 1 285 1.5E-102 T 23-10-2018 DLM_4308 c96aa53644937afeb877eb87b9634097 360 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 69 285 1.7E-75 T 23-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DLM_4308 c96aa53644937afeb877eb87b9634097 360 Pfam PF02481 DNA recombination-mediator protein A 73 277 4.7E-75 T 23-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DLM_4308 c96aa53644937afeb877eb87b9634097 360 SUPERFAMILY SSF102405 81 286 9.77E-44 T 23-10-2018 DLM_4308 c96aa53644937afeb877eb87b9634097 360 Gene3D G3DSA:1.10.10.10 286 358 4.8E-10 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1951 85186a325db3707d1b5068ea94cfb72c 345 SUPERFAMILY SSF53850 26 342 6.04E-75 T 23-10-2018 DLM_1951 85186a325db3707d1b5068ea94cfb72c 345 Pfam PF13416 Bacterial extracellular solute-binding protein 43 312 5.0E-49 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_1951 85186a325db3707d1b5068ea94cfb72c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 291 317 2.3E-5 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1951 85186a325db3707d1b5068ea94cfb72c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 2.3E-5 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1951 85186a325db3707d1b5068ea94cfb72c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 2.3E-5 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1951 85186a325db3707d1b5068ea94cfb72c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 246 265 2.3E-5 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1951 85186a325db3707d1b5068ea94cfb72c 345 Gene3D G3DSA:3.40.190.10 28 323 2.8E-128 T 23-10-2018 DLM_1951 85186a325db3707d1b5068ea94cfb72c 345 Gene3D G3DSA:3.40.190.10 128 330 2.8E-128 T 23-10-2018 DLM_2150 60f1940032636052cd04b48a243051d1 305 Gene3D G3DSA:3.40.190.10 92 289 2.2E-50 T 23-10-2018 DLM_2150 60f1940032636052cd04b48a243051d1 305 Gene3D G3DSA:1.10.10.10 3 91 1.6E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2150 60f1940032636052cd04b48a243051d1 305 SUPERFAMILY SSF53850 92 293 4.89E-34 T 23-10-2018 DLM_2150 60f1940032636052cd04b48a243051d1 305 SUPERFAMILY SSF46785 8 88 2.21E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2150 60f1940032636052cd04b48a243051d1 305 Gene3D G3DSA:3.40.190.10 172 266 2.2E-50 T 23-10-2018 DLM_2150 60f1940032636052cd04b48a243051d1 305 Pfam PF03466 LysR substrate binding domain 96 293 2.9E-18 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2150 60f1940032636052cd04b48a243051d1 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.6E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1120 5be446fba8821754f75f9ae31da5182c 166 SUPERFAMILY SSF89963 89 166 2.88E-24 T 23-10-2018 IPR036183 YajQ-like superfamily DLM_1120 5be446fba8821754f75f9ae31da5182c 166 Pfam PF04461 Protein of unknown function (DUF520) 2 165 6.2E-65 T 23-10-2018 IPR007551 Protein of unknown function DUF520 DLM_1120 5be446fba8821754f75f9ae31da5182c 166 Gene3D G3DSA:3.30.70.990 9 94 5.9E-29 T 23-10-2018 IPR035570 UPF0234, N-terminal DLM_1120 5be446fba8821754f75f9ae31da5182c 166 SUPERFAMILY SSF89963 2 87 3.4E-32 T 23-10-2018 IPR036183 YajQ-like superfamily DLM_1120 5be446fba8821754f75f9ae31da5182c 166 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 166 26.93 T 23-10-2018 IPR007551 Protein of unknown function DUF520 DLM_1120 5be446fba8821754f75f9ae31da5182c 166 Gene3D G3DSA:3.30.70.860 95 166 3.2E-27 T 23-10-2018 IPR035571 UPF0234-like, C-terminal DLM_3974 cde24273b2f6f18b116e39b772cf52ad 439 SMART SM01091 347 430 5.6E-30 T 23-10-2018 IPR005170 Transporter-associated domain DLM_3974 cde24273b2f6f18b116e39b772cf52ad 439 SUPERFAMILY SSF54631 200 333 1.21E-25 T 23-10-2018 DLM_3974 cde24273b2f6f18b116e39b772cf52ad 439 Gene3D G3DSA:3.10.580.10 192 342 3.6E-39 T 23-10-2018 DLM_3974 cde24273b2f6f18b116e39b772cf52ad 439 SUPERFAMILY SSF56176 345 428 1.83E-23 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_3974 cde24273b2f6f18b116e39b772cf52ad 439 Gene3D G3DSA:3.30.465.10 343 428 1.6E-33 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DLM_3974 cde24273b2f6f18b116e39b772cf52ad 439 Pfam PF00571 CBS domain 284 330 2.2E-7 T 23-10-2018 IPR000644 CBS domain DLM_3974 cde24273b2f6f18b116e39b772cf52ad 439 Pfam PF03471 Transporter associated domain 348 428 2.4E-19 T 23-10-2018 IPR005170 Transporter-associated domain DLM_3974 cde24273b2f6f18b116e39b772cf52ad 439 Pfam PF01595 Domain of unknown function DUF21 5 197 1.2E-48 T 23-10-2018 IPR002550 CNNM, transmembrane domain DLM_2725 10f57793827682304657f6c84777f524 215 Gene3D G3DSA:1.20.120.700 6 155 2.5E-16 T 23-10-2018 DLM_2725 10f57793827682304657f6c84777f524 215 Pfam PF02613 Nitrate reductase delta subunit 38 128 1.4E-10 T 23-10-2018 IPR020945 DMSO/Nitrate reductase chaperone DLM_2725 10f57793827682304657f6c84777f524 215 SUPERFAMILY SSF89155 5 162 1.23E-32 T 23-10-2018 IPR036411 TorD-like superfamily DLM_2725 10f57793827682304657f6c84777f524 215 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 10 159 4.2E-33 T 23-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 DLM_2725 10f57793827682304657f6c84777f524 215 Gene3D G3DSA:1.10.4070.10 67 148 2.5E-16 T 23-10-2018 DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 SUPERFAMILY SSF56042 137 302 1.3E-34 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 317 26.536 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 317 2.1E-98 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 Pfam PF02769 AIR synthase related protein, C-terminal domain 145 298 2.1E-12 T 23-10-2018 IPR010918 PurM-like, C-terminal domain DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 Gene3D G3DSA:3.90.650.10 140 318 1.5E-47 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 Pfam PF00586 AIR synthase related protein, N-terminal domain 24 132 2.1E-22 T 23-10-2018 IPR016188 PurM-like, N-terminal domain DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 Gene3D G3DSA:3.30.1330.10 1 139 1.8E-48 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 SUPERFAMILY SSF55326 2 132 2.44E-32 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DLM_1999 f9312e2687071f7e3432f45ddb7fc10c 318 PIRSF PIRSF005303 1 317 4.8E-75 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DLM_2658 cd80c2a6b35f5313b40e43e432e468c4 335 Gene3D G3DSA:3.40.190.10 115 327 4.9E-97 T 23-10-2018 DLM_2658 cd80c2a6b35f5313b40e43e432e468c4 335 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 22 326 5.0E-102 T 23-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 DLM_2658 cd80c2a6b35f5313b40e43e432e468c4 335 Pfam PF13343 Bacterial extracellular solute-binding protein 71 294 2.6E-21 T 23-10-2018 DLM_2658 cd80c2a6b35f5313b40e43e432e468c4 335 SUPERFAMILY SSF53850 23 332 3.8E-54 T 23-10-2018 DLM_2658 cd80c2a6b35f5313b40e43e432e468c4 335 Gene3D G3DSA:3.40.190.10 26 302 4.9E-97 T 23-10-2018 DLM_3619 b14007e71bd23d37084cfa05caa2fdff 308 SUPERFAMILY SSF46785 3 86 3.31E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3619 b14007e71bd23d37084cfa05caa2fdff 308 Gene3D G3DSA:3.40.190.10 165 267 1.3E-61 T 23-10-2018 DLM_3619 b14007e71bd23d37084cfa05caa2fdff 308 Pfam PF03466 LysR substrate binding domain 88 293 2.0E-44 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3619 b14007e71bd23d37084cfa05caa2fdff 308 Gene3D G3DSA:1.10.10.10 2 91 1.2E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3619 b14007e71bd23d37084cfa05caa2fdff 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3619 b14007e71bd23d37084cfa05caa2fdff 308 SUPERFAMILY SSF53850 88 294 7.47E-46 T 23-10-2018 DLM_3619 b14007e71bd23d37084cfa05caa2fdff 308 Gene3D G3DSA:3.40.190.10 92 293 1.3E-61 T 23-10-2018 DLM_3934 5eb28f2bbda36257e1ea2406f0690696 262 SUPERFAMILY SSF75217 91 260 2.77E-52 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases DLM_3934 5eb28f2bbda36257e1ea2406f0690696 262 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 22 259 4.9E-60 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DLM_3934 5eb28f2bbda36257e1ea2406f0690696 262 Pfam PF04452 RNA methyltransferase 37 255 8.0E-71 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DLM_3934 5eb28f2bbda36257e1ea2406f0690696 262 SUPERFAMILY SSF88697 21 85 6.21E-15 T 23-10-2018 IPR015947 PUA-like superfamily DLM_3934 5eb28f2bbda36257e1ea2406f0690696 262 Gene3D G3DSA:3.40.1280.10 91 261 6.1E-57 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DLM_3934 5eb28f2bbda36257e1ea2406f0690696 262 PIRSF PIRSF015601 20 260 3.6E-58 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DLM_3934 5eb28f2bbda36257e1ea2406f0690696 262 Gene3D G3DSA:2.40.240.20 20 88 1.3E-20 T 23-10-2018 DLM_2747 08fae01391687853967041dd4fbad116 439 Gene3D G3DSA:3.50.50.60 1 421 3.2E-113 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2747 08fae01391687853967041dd4fbad116 439 SUPERFAMILY SSF51905 4 250 7.89E-15 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2747 08fae01391687853967041dd4fbad116 439 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 341 4.6E-121 T 23-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase DLM_0342 4e9be2b32a1e2442b65b7560ed444fc5 329 SUPERFAMILY SSF52540 31 222 4.12E-18 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0342 4e9be2b32a1e2442b65b7560ed444fc5 329 Pfam PF05621 Bacterial TniB protein 19 276 5.5E-36 T 23-10-2018 IPR008868 Bacterial TniB DLM_0342 4e9be2b32a1e2442b65b7560ed444fc5 329 SMART SM00382 51 208 3.2E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0342 4e9be2b32a1e2442b65b7560ed444fc5 329 Gene3D G3DSA:3.40.50.300 17 203 1.9E-16 T 23-10-2018 DLM_1978 10788062a4bf1946e464c715d6ed1903 348 SUPERFAMILY SSF51412 1 335 6.26E-54 T 23-10-2018 DLM_1978 10788062a4bf1946e464c715d6ed1903 348 Pfam PF03060 Nitronate monooxygenase 3 332 4.2E-54 T 23-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DLM_1978 10788062a4bf1946e464c715d6ed1903 348 Gene3D G3DSA:3.20.20.70 1 346 6.4E-92 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_4064 f561a0a00e046a1f9f4594fc5d592670 231 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 12 223 3.1E-31 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_4064 f561a0a00e046a1f9f4594fc5d592670 231 Pfam PF01914 MarC family integral membrane protein 13 226 7.7E-32 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_4225 ffff44c25e2f02b3b8aec004220fa760 120 Gene3D G3DSA:2.60.120.10 3 116 5.1E-28 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_4225 ffff44c25e2f02b3b8aec004220fa760 120 Pfam PF05899 Protein of unknown function (DUF861) 42 114 1.3E-22 T 23-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 DLM_4225 ffff44c25e2f02b3b8aec004220fa760 120 SUPERFAMILY SSF51182 15 117 1.05E-19 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2551 87cdc2bbf800ad9d5ffcb27f95402839 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 259 1.8E-52 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_2551 87cdc2bbf800ad9d5ffcb27f95402839 260 SUPERFAMILY SSF52096 2 259 6.51E-78 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_2551 87cdc2bbf800ad9d5ffcb27f95402839 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DLM_2551 87cdc2bbf800ad9d5ffcb27f95402839 260 Gene3D G3DSA:3.90.226.10 1 260 2.1E-80 T 23-10-2018 DLM_1031 d0e4e7b3891b095724f6ebc4d8539444 190 PIRSF PIRSF001296 1 190 9.3E-77 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 DLM_1031 d0e4e7b3891b095724f6ebc4d8539444 190 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 189 35.524 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 DLM_1031 d0e4e7b3891b095724f6ebc4d8539444 190 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 188 8.0E-71 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 DLM_1031 d0e4e7b3891b095724f6ebc4d8539444 190 Pfam PF02669 K+-transporting ATPase, c chain 6 187 3.9E-73 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 DLM_2645 f492d8040e09a529e499e6d5cf6d609a 270 Pfam PF13276 HTH-like domain 22 75 7.6E-16 T 23-10-2018 IPR025948 HTH-like domain DLM_2645 f492d8040e09a529e499e6d5cf6d609a 270 SUPERFAMILY SSF53098 96 261 1.67E-40 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_2645 f492d8040e09a529e499e6d5cf6d609a 270 Gene3D G3DSA:3.30.420.10 101 259 1.0E-15 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_2645 f492d8040e09a529e499e6d5cf6d609a 270 Pfam PF00665 Integrase core domain 103 217 4.0E-32 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_1826 f24c4a783165806240d9a1ee9c74534a 397 Gene3D G3DSA:3.40.640.10 70 293 1.5E-131 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1826 f24c4a783165806240d9a1ee9c74534a 397 Gene3D G3DSA:3.90.1150.10 294 392 1.5E-131 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_1826 f24c4a783165806240d9a1ee9c74534a 397 Pfam PF00155 Aminotransferase class I and II 37 387 1.6E-58 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_1826 f24c4a783165806240d9a1ee9c74534a 397 SUPERFAMILY SSF53383 10 396 2.42E-107 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0437 501a1873bc4dc2264839df458ce1a941 147 PIRSF PIRSF037839 3 134 3.6E-8 T 23-10-2018 IPR017290 Ribonuclease H, Bacteroides-type GO:0004523 DLM_0437 501a1873bc4dc2264839df458ce1a941 147 SUPERFAMILY SSF53098 5 145 3.16E-58 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0437 501a1873bc4dc2264839df458ce1a941 147 Gene3D G3DSA:3.30.420.10 2 147 2.9E-59 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0437 501a1873bc4dc2264839df458ce1a941 147 Hamap MF_00042 Ribonuclease H [rnhA]. 4 147 32.014 T 23-10-2018 IPR022892 Ribonuclease HI GO:0004523 DLM_0437 501a1873bc4dc2264839df458ce1a941 147 Pfam PF00075 RNase H 7 144 7.0E-48 T 23-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DLM_0008 844356017b33ff7882f38af08e2e7aaa 349 Gene3D G3DSA:3.30.750.140 248 349 3.8E-7 T 23-10-2018 IPR038610 FliK-like, C-terminal domain superfamily DLM_0008 844356017b33ff7882f38af08e2e7aaa 349 Pfam PF02120 Flagellar hook-length control protein FliK 274 346 9.2E-15 T 23-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal DLM_3139 bcd7b7360c9940383099c682c0e6c4df 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 14 165 5.7E-61 T 23-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit DLM_3139 bcd7b7360c9940383099c682c0e6c4df 165 Pfam PF01883 Iron-sulfur cluster assembly protein 5 67 1.3E-13 T 23-10-2018 IPR002744 MIP18 family-like DLM_3139 bcd7b7360c9940383099c682c0e6c4df 165 Gene3D G3DSA:3.30.300.130 2 97 2.0E-23 T 23-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DLM_3139 bcd7b7360c9940383099c682c0e6c4df 165 SUPERFAMILY SSF117916 2 97 1.14E-22 T 23-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DLM_1180 5321759f95adfe0fbeab919934f9969e 308 SUPERFAMILY SSF90002 225 307 7.19E-5 T 23-10-2018 DLM_1180 5321759f95adfe0fbeab919934f9969e 308 SUPERFAMILY SSF52540 6 180 7.1E-28 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1180 5321759f95adfe0fbeab919934f9969e 308 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 223 306 2.0E-10 T 23-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DLM_1180 5321759f95adfe0fbeab919934f9969e 308 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 179 1.5E-40 T 23-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DLM_1180 5321759f95adfe0fbeab919934f9969e 308 SMART SM00833 221 307 2.9E-14 T 23-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DLM_1180 5321759f95adfe0fbeab919934f9969e 308 Gene3D G3DSA:3.40.50.300 4 200 5.9E-45 T 23-10-2018 DLM_3439 1b9b00106f57a3bf335debc95dab5798 207 SUPERFAMILY SSF52833 1 83 1.08E-17 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3439 1b9b00106f57a3bf335debc95dab5798 207 SUPERFAMILY SSF47616 87 200 1.67E-26 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_3439 1b9b00106f57a3bf335debc95dab5798 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 81 3.3E-12 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_3439 1b9b00106f57a3bf335debc95dab5798 207 Gene3D G3DSA:3.40.30.10 1 81 1.6E-17 T 23-10-2018 DLM_3439 1b9b00106f57a3bf335debc95dab5798 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 192 1.7E-12 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal DLM_3439 1b9b00106f57a3bf335debc95dab5798 207 Gene3D G3DSA:1.20.1050.10 86 195 3.0E-27 T 23-10-2018 DLM_3491 5a0e6b5ca1c4147ca936b93c249fb3c0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.6E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3491 5a0e6b5ca1c4147ca936b93c249fb3c0 301 Gene3D G3DSA:3.40.190.290 92 299 4.4E-32 T 23-10-2018 DLM_3491 5a0e6b5ca1c4147ca936b93c249fb3c0 301 SUPERFAMILY SSF46785 7 111 9.25E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3491 5a0e6b5ca1c4147ca936b93c249fb3c0 301 Pfam PF03466 LysR substrate binding domain 90 295 2.7E-34 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3491 5a0e6b5ca1c4147ca936b93c249fb3c0 301 SUPERFAMILY SSF53850 92 297 9.77E-35 T 23-10-2018 DLM_3491 5a0e6b5ca1c4147ca936b93c249fb3c0 301 Gene3D G3DSA:1.10.10.10 5 86 8.1E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2133 2de69920f6439db8777661588ef81cd7 456 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_2133 2de69920f6439db8777661588ef81cd7 456 Pfam PF07690 Major Facilitator Superfamily 31 341 3.2E-36 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2133 2de69920f6439db8777661588ef81cd7 456 SUPERFAMILY SSF103473 2 435 1.15E-75 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2133 2de69920f6439db8777661588ef81cd7 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 96 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_2133 2de69920f6439db8777661588ef81cd7 456 Gene3D G3DSA:1.20.1250.20 20 435 2.9E-65 T 23-10-2018 DLM_1406 8c78c64611eb7cc7582b949ee09d8c99 393 Gene3D G3DSA:1.20.1250.20 13 387 2.1E-22 T 23-10-2018 DLM_1406 8c78c64611eb7cc7582b949ee09d8c99 393 SUPERFAMILY SSF103473 13 384 2.62E-31 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_4481 3ff69e64a9c0853a100690245fe9a6b0 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.9E-180 T 23-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4481 3ff69e64a9c0853a100690245fe9a6b0 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.641 T 23-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DLM_4481 3ff69e64a9c0853a100690245fe9a6b0 417 Gene3D G3DSA:3.65.10.10 6 413 2.4E-166 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DLM_4481 3ff69e64a9c0853a100690245fe9a6b0 417 SUPERFAMILY SSF55205 1 416 1.42E-141 T 23-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DLM_4481 3ff69e64a9c0853a100690245fe9a6b0 417 Gene3D G3DSA:3.65.10.10 21 229 2.4E-166 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DLM_4481 3ff69e64a9c0853a100690245fe9a6b0 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 406 5.7E-109 T 23-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DLM_0598 bfbae0f199de25cb6114127e9d8285c5 112 Pfam PF02635 DsrE/DsrF-like family 4 112 3.2E-22 T 23-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein DLM_0598 bfbae0f199de25cb6114127e9d8285c5 112 SUPERFAMILY SSF75169 2 112 1.23E-26 T 23-10-2018 IPR027396 DsrEFH-like DLM_0598 bfbae0f199de25cb6114127e9d8285c5 112 Gene3D G3DSA:3.40.1260.10 1 112 1.6E-28 T 23-10-2018 IPR027396 DsrEFH-like DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 SUPERFAMILY SSF46785 1 86 2.09E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 SUPERFAMILY SSF53850 89 294 5.12E-33 T 23-10-2018 DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 Gene3D G3DSA:1.10.10.10 1 89 4.4E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 Pfam PF03466 LysR substrate binding domain 88 291 3.5E-33 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2128 88138b40abe199f2b9b87f59dbc7f2b9 301 Gene3D G3DSA:3.40.190.290 91 296 2.0E-35 T 23-10-2018 DLM_1881 cdf2f31725c8beec72b0fc4bb9639d06 249 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 24 244 1.2E-78 T 23-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DLM_1881 cdf2f31725c8beec72b0fc4bb9639d06 249 Gene3D G3DSA:3.60.140.10 1 248 4.8E-96 T 23-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DLM_1881 cdf2f31725c8beec72b0fc4bb9639d06 249 SUPERFAMILY SSF64438 7 246 9.89E-88 T 23-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DLM_1881 cdf2f31725c8beec72b0fc4bb9639d06 249 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 31 245 2.3E-63 T 23-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DLM_2796 80d610ea6df417ab4209c17fdae81917 180 Pfam PF05163 DinB family 1 172 4.3E-31 T 23-10-2018 IPR007837 DNA damage-inducible protein DinB DLM_2796 80d610ea6df417ab4209c17fdae81917 180 Gene3D G3DSA:1.20.120.450 3 174 4.7E-44 T 23-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DLM_2796 80d610ea6df417ab4209c17fdae81917 180 SUPERFAMILY SSF109854 8 158 1.32E-32 T 23-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DLM_1178 6289c2739c1f308bd4c8bd6362b2de83 146 PIRSF PIRSF000027 3 146 1.6E-36 T 23-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 DLM_1178 6289c2739c1f308bd4c8bd6362b2de83 146 SUPERFAMILY SSF47175 18 145 5.74E-34 T 23-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 DLM_1178 6289c2739c1f308bd4c8bd6362b2de83 146 Pfam PF01322 Cytochrome C' 22 144 3.1E-32 T 23-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 DLM_1178 6289c2739c1f308bd4c8bd6362b2de83 146 Gene3D G3DSA:1.20.120.10 18 146 6.8E-33 T 23-10-2018 DLM_2668 f8513b37d1cd3ac1cbe340f9d490fada 116 Pfam PF07409 Phage protein GP46 38 108 5.2E-17 T 23-10-2018 IPR010877 Bacteriophage Mu, Gp46 DLM_2668 f8513b37d1cd3ac1cbe340f9d490fada 116 SUPERFAMILY SSF160719 16 100 4.58E-7 T 23-10-2018 DLM_2668 f8513b37d1cd3ac1cbe340f9d490fada 116 Gene3D G3DSA:3.10.450.40 6 116 4.9E-6 T 23-10-2018 DLM_2867 7f6effc7ef874e15f6a3f359e6218838 190 Pfam PF04011 LemA family 8 182 4.5E-53 T 23-10-2018 IPR007156 LemA DLM_2867 7f6effc7ef874e15f6a3f359e6218838 190 Gene3D G3DSA:1.20.1440.20 14 183 6.0E-46 T 23-10-2018 IPR023353 LemA-like domain superfamily DLM_2867 7f6effc7ef874e15f6a3f359e6218838 190 SUPERFAMILY SSF140478 24 173 2.09E-42 T 23-10-2018 IPR023353 LemA-like domain superfamily DLM_2343 f473db132858a85ea4a3bc4dec5e1871 75 SUPERFAMILY SSF159127 1 71 1.44E-22 T 23-10-2018 IPR037254 HupF/HypC superfamily DLM_2343 f473db132858a85ea4a3bc4dec5e1871 75 Gene3D G3DSA:2.40.50.970 1 74 6.8E-25 T 23-10-2018 IPR037254 HupF/HypC superfamily DLM_2343 f473db132858a85ea4a3bc4dec5e1871 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 6.1E-20 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2343 f473db132858a85ea4a3bc4dec5e1871 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 6.1E-20 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2343 f473db132858a85ea4a3bc4dec5e1871 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 6.1E-20 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2343 f473db132858a85ea4a3bc4dec5e1871 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 6.1E-20 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2343 f473db132858a85ea4a3bc4dec5e1871 75 Pfam PF01455 HupF/HypC family 1 66 9.8E-25 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_2343 f473db132858a85ea4a3bc4dec5e1871 75 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 71 4.9E-23 T 23-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DLM_3611 d3374cbd5d761dbc3516915b165cfff7 688 Pfam PF02554 Carbon starvation protein CstA 32 408 3.3E-173 T 23-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 DLM_3611 d3374cbd5d761dbc3516915b165cfff7 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 2.5E-34 T 23-10-2018 IPR025299 CstA, C-terminal domain DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 SUPERFAMILY SSF55103 370 748 1.78E-39 T 23-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 SUPERFAMILY SSF56176 98 365 7.36E-56 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Pfam PF02913 FAD linked oxidases, C-terminal domain 401 517 1.8E-4 T 23-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Pfam PF02913 FAD linked oxidases, C-terminal domain 656 745 1.9E-18 T 23-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Pfam PF13183 4Fe-4S dicluster domain 781 860 4.0E-7 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Pfam PF02754 Cysteine-rich domain 992 1081 1.6E-6 T 23-10-2018 IPR004017 Cysteine-rich domain DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Pfam PF02754 Cysteine-rich domain 1117 1201 2.1E-4 T 23-10-2018 IPR004017 Cysteine-rich domain DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Gene3D G3DSA:3.30.465.40 97 305 4.5E-33 T 23-10-2018 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Gene3D G3DSA:3.30.70.2740 636 709 3.7E-7 T 23-10-2018 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Pfam PF11880 Domain of unknown function (DUF3400) 1204 1248 3.0E-25 T 23-10-2018 IPR021817 Protein of unknown function DUF3400 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Pfam PF01565 FAD binding domain 137 279 1.9E-23 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 Pfam PF12447 Protein of unknown function (DUF3683) 1 87 1.0E-35 T 23-10-2018 IPR022153 Protein of unknown function DUF3683 DLM_4344 0d62bfb5c97bebefb4fb8f876b4299e9 1248 SUPERFAMILY SSF46548 774 876 8.37E-13 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DLM_2249 92b0701acd1025b507632e8656d7c25c 103 Gene3D G3DSA:2.60.120.10 1 103 3.6E-41 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2249 92b0701acd1025b507632e8656d7c25c 103 SUPERFAMILY SSF51182 11 102 4.28E-32 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2249 92b0701acd1025b507632e8656d7c25c 103 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 103 25.726 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 DLM_2249 92b0701acd1025b507632e8656d7c25c 103 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 8.9E-35 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 DLM_4212 8f72a4201030c1c2f1c5b41c9962bb58 361 ProSitePatterns PS00482 Dihydroorotase signature 1. 28 36 - T 23-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_4212 8f72a4201030c1c2f1c5b41c9962bb58 361 ProSitePatterns PS00483 Dihydroorotase signature 2. 262 273 - T 23-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_4212 8f72a4201030c1c2f1c5b41c9962bb58 361 SUPERFAMILY SSF51556 18 359 5.26E-150 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_4212 8f72a4201030c1c2f1c5b41c9962bb58 361 Hamap MF_00219 Dihydroorotase [pyrC]. 19 360 47.579 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_4212 8f72a4201030c1c2f1c5b41c9962bb58 361 PIRSF PIRSF001237 17 361 2.4E-141 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_4212 8f72a4201030c1c2f1c5b41c9962bb58 361 Gene3D G3DSA:3.20.20.140 19 361 2.0E-110 T 23-10-2018 DLM_4212 8f72a4201030c1c2f1c5b41c9962bb58 361 Pfam PF01979 Amidohydrolase family 24 328 2.1E-24 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_4212 8f72a4201030c1c2f1c5b41c9962bb58 361 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 21 360 1.7E-143 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DLM_3490 54e15f5ca54f8c849d1dfbee083dd5e8 481 Gene3D G3DSA:3.40.630.10 58 440 2.7E-85 T 23-10-2018 DLM_3490 54e15f5ca54f8c849d1dfbee083dd5e8 481 SUPERFAMILY SSF53187 19 460 1.22E-45 T 23-10-2018 DLM_3490 54e15f5ca54f8c849d1dfbee083dd5e8 481 Pfam PF01546 Peptidase family M20/M25/M40 95 453 2.7E-21 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 DLM_3490 54e15f5ca54f8c849d1dfbee083dd5e8 481 Pfam PF07687 Peptidase dimerisation domain 208 361 7.1E-8 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain DLM_3490 54e15f5ca54f8c849d1dfbee083dd5e8 481 Gene3D G3DSA:3.30.70.360 210 373 2.7E-85 T 23-10-2018 DLM_1368 6bc4a5c4673a3bb4ddeb846d0b89d7e5 532 Pfam PF02653 Branched-chain amino acid transport system / permease component 240 514 7.8E-50 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_1368 6bc4a5c4673a3bb4ddeb846d0b89d7e5 532 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 240 529 2.1E-130 T 23-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type DLM_1368 6bc4a5c4673a3bb4ddeb846d0b89d7e5 532 SUPERFAMILY SSF48371 123 228 1.9E-7 T 23-10-2018 IPR016024 Armadillo-type fold DLM_4542 850d0de41ce2be4bf3160ec0bc43c7c4 181 SUPERFAMILY SSF81342 2 175 1.57E-36 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DLM_4542 850d0de41ce2be4bf3160ec0bc43c7c4 181 Pfam PF01292 Prokaryotic cytochrome b561 6 174 2.7E-29 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 301 3.3E-16 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 Gene3D G3DSA:1.10.3720.10 79 309 1.6E-45 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 SMART SM00382 375 572 3.7E-21 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 SUPERFAMILY SSF52540 353 594 3.87E-75 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 SUPERFAMILY SSF161098 85 289 3.27E-35 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 Gene3D G3DSA:3.40.50.300 348 598 1.4E-81 T 23-10-2018 DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 Pfam PF00005 ABC transporter 366 524 4.3E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2058 94d46affdd738ef4bfbd9e654acffcbb 599 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 198 3.3E-14 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_1335 040571733b743e190d33b9d098a91889 334 Pfam PF01965 DJ-1/PfpI family 50 188 9.7E-10 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DLM_1335 040571733b743e190d33b9d098a91889 334 Gene3D G3DSA:1.10.10.60 232 333 3.3E-26 T 23-10-2018 DLM_1335 040571733b743e190d33b9d098a91889 334 SUPERFAMILY SSF52317 1 207 1.04E-34 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1335 040571733b743e190d33b9d098a91889 334 SMART SM00342 243 326 2.5E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1335 040571733b743e190d33b9d098a91889 334 Gene3D G3DSA:3.40.50.880 1 209 4.9E-42 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1335 040571733b743e190d33b9d098a91889 334 Pfam PF12833 Helix-turn-helix domain 249 328 7.7E-23 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1335 040571733b743e190d33b9d098a91889 334 SUPERFAMILY SSF46689 279 330 2.8E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1335 040571733b743e190d33b9d098a91889 334 SUPERFAMILY SSF46689 233 277 1.79E-5 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 71 76 - T 23-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 PRINTS PR00839 V8 serine protease family signature 203 219 2.8E-13 T 23-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 PRINTS PR00839 V8 serine protease family signature 223 235 2.8E-13 T 23-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 PRINTS PR00839 V8 serine protease family signature 60 77 2.8E-13 T 23-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 PRINTS PR00839 V8 serine protease family signature 169 182 2.8E-13 T 23-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 Pfam PF00089 Trypsin 40 241 1.4E-13 T 23-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 Gene3D G3DSA:2.40.10.10 31 233 1.3E-25 T 23-10-2018 DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 SUPERFAMILY SSF50494 9 261 1.09E-26 T 23-10-2018 IPR009003 Peptidase S1, PA clan DLM_0020 4e3e2f38b8a6c4472a7e03af6ed730ac 272 Gene3D G3DSA:2.40.10.10 45 152 1.3E-25 T 23-10-2018 DLM_2987 71f7506a2b49ab39fd86ccd9d83808d7 234 SUPERFAMILY SSF52402 10 228 5.29E-60 T 23-10-2018 DLM_2987 71f7506a2b49ab39fd86ccd9d83808d7 234 PIRSF PIRSF006293 8 232 1.1E-74 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DLM_2987 71f7506a2b49ab39fd86ccd9d83808d7 234 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 10 226 52.317 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DLM_2987 71f7506a2b49ab39fd86ccd9d83808d7 234 Gene3D G3DSA:3.40.50.620 8 231 1.1E-72 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_2987 71f7506a2b49ab39fd86ccd9d83808d7 234 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 12 213 1.3E-73 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DLM_2987 71f7506a2b49ab39fd86ccd9d83808d7 234 Pfam PF06508 Queuosine biosynthesis protein QueC 11 220 2.5E-75 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DLM_2273 dd8cd17159630421c4193ceaedf286e0 228 SMART SM00448 1 111 1.1E-40 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2273 dd8cd17159630421c4193ceaedf286e0 228 Gene3D G3DSA:3.40.50.2300 1 113 1.0E-33 T 23-10-2018 DLM_2273 dd8cd17159630421c4193ceaedf286e0 228 Gene3D G3DSA:1.10.10.10 114 228 2.7E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2273 dd8cd17159630421c4193ceaedf286e0 228 SUPERFAMILY SSF52172 1 130 6.83E-40 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2273 dd8cd17159630421c4193ceaedf286e0 228 SMART SM00862 149 225 2.3E-17 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_2273 dd8cd17159630421c4193ceaedf286e0 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 3.5E-18 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_2273 dd8cd17159630421c4193ceaedf286e0 228 Pfam PF00072 Response regulator receiver domain 3 112 8.0E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2273 dd8cd17159630421c4193ceaedf286e0 228 SUPERFAMILY SSF46894 125 226 4.82E-22 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_0562 45d63e204f33b0e4a6879cac1393c86b 265 Gene3D G3DSA:2.60.120.10 119 264 8.9E-59 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_0562 45d63e204f33b0e4a6879cac1393c86b 265 PIRSF PIRSF036628 1 264 2.1E-107 T 23-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DLM_0562 45d63e204f33b0e4a6879cac1393c86b 265 SUPERFAMILY SSF51182 15 249 1.22E-64 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_0562 45d63e204f33b0e4a6879cac1393c86b 265 Pfam PF04962 KduI/IolB family 5 260 3.6E-107 T 23-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DLM_0562 45d63e204f33b0e4a6879cac1393c86b 265 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 15 260 4.5E-99 T 23-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DLM_0562 45d63e204f33b0e4a6879cac1393c86b 265 Gene3D G3DSA:2.60.120.10 11 118 4.4E-34 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_1108 d69e74a1e123ff15119dfcdda04c16ea 708 Pfam PF13307 Helicase C-terminal domain 548 704 1.2E-31 T 23-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DLM_1108 d69e74a1e123ff15119dfcdda04c16ea 708 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 708 36.191 T 23-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 DLM_1108 d69e74a1e123ff15119dfcdda04c16ea 708 Gene3D G3DSA:3.40.50.300 525 706 9.1E-31 T 23-10-2018 DLM_1108 d69e74a1e123ff15119dfcdda04c16ea 708 SMART SM00491 558 691 7.6E-27 T 23-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DLM_1108 d69e74a1e123ff15119dfcdda04c16ea 708 SUPERFAMILY SSF52540 56 685 1.33E-17 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1336 6572f23797312221771dc7f71474ef7f 276 Pfam PF12697 Alpha/beta hydrolase family 54 265 3.5E-17 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_1336 6572f23797312221771dc7f71474ef7f 276 Gene3D G3DSA:3.40.50.1820 51 274 1.5E-37 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1336 6572f23797312221771dc7f71474ef7f 276 SUPERFAMILY SSF53474 44 269 5.88E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1162 c51df625a94528b0cfdbe28e46244652 448 Gene3D G3DSA:2.40.30.10 364 436 2.1E-6 T 23-10-2018 DLM_1162 c51df625a94528b0cfdbe28e46244652 448 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DLM_1162 c51df625a94528b0cfdbe28e46244652 448 Pfam PF16325 Peptidase family U32 C-terminal domain 368 446 9.4E-17 T 23-10-2018 IPR032525 Peptidase family U32, C-terminal DLM_1162 c51df625a94528b0cfdbe28e46244652 448 Pfam PF01136 Peptidase family U32 77 352 4.4E-97 T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DLM_4338 d909ef938d3e0f0dec97ab67cce298fd 208 Gene3D G3DSA:3.40.50.1820 5 207 3.7E-44 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4338 d909ef938d3e0f0dec97ab67cce298fd 208 SUPERFAMILY SSF53474 18 204 1.47E-28 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4338 d909ef938d3e0f0dec97ab67cce298fd 208 Pfam PF06821 Serine hydrolase 20 204 4.0E-56 T 23-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 3 319 1.4E-156 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 SUPERFAMILY SSF52096 5 316 1.67E-105 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_1086 997c2841ee64a19716f63aa90b126b83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.6E-49 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.6E-49 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.6E-49 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.6E-49 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.6E-49 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.6E-49 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 6.2E-67 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 Gene3D G3DSA:3.90.226.10 1 318 3.9E-122 T 23-10-2018 DLM_1086 997c2841ee64a19716f63aa90b126b83 321 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 51.181 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DLM_0455 c1102f0642a3d8ef78670240bb00f93d 283 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DLM_0455 c1102f0642a3d8ef78670240bb00f93d 283 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 275 1.0E-79 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DLM_0455 c1102f0642a3d8ef78670240bb00f93d 283 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 281 20.231 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DLM_0455 c1102f0642a3d8ef78670240bb00f93d 283 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 281 2.5E-84 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DLM_4312 3a750c69dfa826856eb2fbeb5767e17c 283 Pfam PF01435 Peptidase family M48 72 278 2.9E-36 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DLM_4312 3a750c69dfa826856eb2fbeb5767e17c 283 Hamap MF_00188 Protease HtpX [htpX]. 4 278 28.357 T 23-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DLM_4312 3a750c69dfa826856eb2fbeb5767e17c 283 Gene3D G3DSA:3.30.2010.10 57 149 1.2E-29 T 23-10-2018 DLM_3137 8f3b6ae78eec3755ac3c665eec9a510e 220 Gene3D G3DSA:1.10.357.10 55 193 5.3E-29 T 23-10-2018 DLM_3137 8f3b6ae78eec3755ac3c665eec9a510e 220 Gene3D G3DSA:1.10.10.60 1 52 8.4E-17 T 23-10-2018 DLM_3137 8f3b6ae78eec3755ac3c665eec9a510e 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.3E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_3137 8f3b6ae78eec3755ac3c665eec9a510e 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.3E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_3137 8f3b6ae78eec3755ac3c665eec9a510e 220 SUPERFAMILY SSF46689 2 76 7.18E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3137 8f3b6ae78eec3755ac3c665eec9a510e 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 5.0E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_3137 8f3b6ae78eec3755ac3c665eec9a510e 220 SUPERFAMILY SSF48498 85 193 5.4E-13 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_1980 7818401677f158eab62900f4d6d75746 398 Gene3D G3DSA:1.20.1530.20 11 393 6.2E-28 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily DLM_1980 7818401677f158eab62900f4d6d75746 398 Pfam PF00999 Sodium/hydrogen exchanger family 21 381 2.7E-23 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DLM_0264 a2c74f67ff4d95bb0989bd393ce36cd0 368 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 16 363 5.6E-124 T 23-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DLM_0264 a2c74f67ff4d95bb0989bd393ce36cd0 368 Hamap MF_01841 Agmatine deiminase [aguA]. 8 364 58.09 T 23-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DLM_0264 a2c74f67ff4d95bb0989bd393ce36cd0 368 Gene3D G3DSA:3.75.10.10 4 368 1.0E-143 T 23-10-2018 DLM_0264 a2c74f67ff4d95bb0989bd393ce36cd0 368 SUPERFAMILY SSF55909 6 364 5.89E-141 T 23-10-2018 DLM_0264 a2c74f67ff4d95bb0989bd393ce36cd0 368 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 9 364 1.0E-173 T 23-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DLM_2097 a5d27f72f51131c5fc93af41d7e3cddf 189 Pfam PF11985 Protein of unknown function (DUF3486) 1 187 1.4E-45 T 23-10-2018 IPR021874 Bacteriophage Mu, Gp27 DLM_3186 698b9843c48cb6dcc28b485c7f9f0934 309 Gene3D G3DSA:3.40.718.10 5 302 1.4E-93 T 23-10-2018 DLM_3186 698b9843c48cb6dcc28b485c7f9f0934 309 PIRSF PIRSF000428 5 305 1.2E-82 T 23-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DLM_3186 698b9843c48cb6dcc28b485c7f9f0934 309 SUPERFAMILY SSF53659 9 301 1.07E-63 T 23-10-2018 DLM_3186 698b9843c48cb6dcc28b485c7f9f0934 309 Pfam PF01515 Phosphate acetyl/butaryl transferase 84 296 1.6E-43 T 23-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DLM_2496 76be174f11bdbe60f1a8bbf4a9fcef43 87 SUPERFAMILY SSF50249 1 71 1.37E-25 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2496 76be174f11bdbe60f1a8bbf4a9fcef43 87 Gene3D G3DSA:2.40.50.140 1 71 4.0E-33 T 23-10-2018 DLM_2496 76be174f11bdbe60f1a8bbf4a9fcef43 87 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.7E-32 T 23-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DLM_2496 76be174f11bdbe60f1a8bbf4a9fcef43 87 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 6.5E-24 T 23-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DLM_2496 76be174f11bdbe60f1a8bbf4a9fcef43 87 SMART SM00316 4 72 2.4E-4 T 23-10-2018 IPR022967 RNA-binding domain, S1 DLM_2496 76be174f11bdbe60f1a8bbf4a9fcef43 87 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.604 T 23-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DLM_0087 b57f44ab15e5912ffbd6b82924d23df3 413 Pfam PF11741 AMIN domain 39 142 1.9E-28 T 23-10-2018 IPR021731 AMIN domain DLM_0087 b57f44ab15e5912ffbd6b82924d23df3 413 Gene3D G3DSA:2.60.40.3500 24 145 1.6E-35 T 23-10-2018 DLM_0087 b57f44ab15e5912ffbd6b82924d23df3 413 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 185 400 3.5E-48 T 23-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DLM_0087 b57f44ab15e5912ffbd6b82924d23df3 413 SMART SM00646 245 400 4.1E-62 T 23-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DLM_0087 b57f44ab15e5912ffbd6b82924d23df3 413 Gene3D G3DSA:3.40.630.40 171 413 1.3E-82 T 23-10-2018 DLM_0087 b57f44ab15e5912ffbd6b82924d23df3 413 SUPERFAMILY SSF53187 183 403 3.45E-53 T 23-10-2018 DLM_3213 dfbeb61a1d7f9384ea2ee7b94459fa54 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 1.1E-22 T 23-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DLM_3213 dfbeb61a1d7f9384ea2ee7b94459fa54 323 SMART SM00382 32 239 1.0E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3213 dfbeb61a1d7f9384ea2ee7b94459fa54 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 297 1.1E-15 T 23-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DLM_3213 dfbeb61a1d7f9384ea2ee7b94459fa54 323 Pfam PF00005 ABC transporter 24 181 9.5E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_3213 dfbeb61a1d7f9384ea2ee7b94459fa54 323 SUPERFAMILY SSF52540 31 308 5.32E-66 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3213 dfbeb61a1d7f9384ea2ee7b94459fa54 323 Gene3D G3DSA:3.40.50.300 1 322 4.1E-93 T 23-10-2018 DLM_3213 dfbeb61a1d7f9384ea2ee7b94459fa54 323 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 Gene3D G3DSA:3.40.50.300 1 255 3.7E-86 T 23-10-2018 DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 Pfam PF00005 ABC transporter 21 170 4.7E-37 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 SMART SM00930 261 336 4.3E-11 T 23-10-2018 IPR018449 NIL domain DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 SUPERFAMILY SSF52540 1 240 7.87E-81 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 SMART SM00382 30 219 4.2E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 Gene3D G3DSA:3.30.70.260 256 337 3.0E-9 T 23-10-2018 DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 SUPERFAMILY SSF55021 263 336 2.75E-10 T 23-10-2018 DLM_2033 215cc9821be3c8d461db4e0057143bd0 337 Pfam PF09383 NIL domain 264 335 2.2E-11 T 23-10-2018 IPR018449 NIL domain DLM_1885 d15c897db408229d8fd2d5c335648b34 360 PIRSF PIRSF000355 12 360 2.2E-132 T 23-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1885 d15c897db408229d8fd2d5c335648b34 360 SUPERFAMILY SSF47240 24 331 9.99E-96 T 23-10-2018 IPR009078 Ferritin-like superfamily DLM_1885 d15c897db408229d8fd2d5c335648b34 360 Gene3D G3DSA:1.10.620.20 15 353 4.0E-113 T 23-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DLM_1885 d15c897db408229d8fd2d5c335648b34 360 Pfam PF00268 Ribonucleotide reductase, small chain 41 327 4.3E-83 T 23-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_1301 485677e469dd634dfc1aa12e9d20e06e 428 SMART SM00671 125 160 1.4E-6 T 23-10-2018 IPR006597 Sel1-like repeat DLM_1301 485677e469dd634dfc1aa12e9d20e06e 428 SMART SM00671 194 225 140.0 T 23-10-2018 IPR006597 Sel1-like repeat DLM_1301 485677e469dd634dfc1aa12e9d20e06e 428 SUPERFAMILY SSF81901 63 228 4.36E-19 T 23-10-2018 DLM_1301 485677e469dd634dfc1aa12e9d20e06e 428 Gene3D G3DSA:1.25.40.10 49 263 3.0E-22 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_1130 5105f951e8c56e64318432ead414a0a0 248 SUPERFAMILY SSF53335 101 238 5.73E-13 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1130 5105f951e8c56e64318432ead414a0a0 248 Gene3D G3DSA:3.40.50.150 92 238 4.9E-15 T 23-10-2018 DLM_3001 25f1d49c372fd326400d6b78e1d4e3ef 466 Pfam PF16980 Putative citrate transport 29 466 3.4E-194 T 23-10-2018 IPR031566 Putative citrate transporter DLM_1737 b78ab0b8966ca0839c803c74f79789bf 242 Gene3D G3DSA:3.40.190.10 107 199 2.1E-12 T 23-10-2018 DLM_1737 b78ab0b8966ca0839c803c74f79789bf 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 227 4.8E-9 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1737 b78ab0b8966ca0839c803c74f79789bf 242 Gene3D G3DSA:3.40.190.10 25 231 2.1E-12 T 23-10-2018 DLM_1737 b78ab0b8966ca0839c803c74f79789bf 242 SUPERFAMILY SSF53850 24 237 1.19E-16 T 23-10-2018 DLM_0674 619b021d25d3ae9d0f8bd8802241262a 339 Pfam PF00107 Zinc-binding dehydrogenase 171 293 2.0E-17 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_0674 619b021d25d3ae9d0f8bd8802241262a 339 SUPERFAMILY SSF50129 1 170 2.28E-52 T 23-10-2018 IPR011032 GroES-like superfamily DLM_0674 619b021d25d3ae9d0f8bd8802241262a 339 SUPERFAMILY SSF51735 138 304 6.2E-23 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0674 619b021d25d3ae9d0f8bd8802241262a 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 129 4.4E-33 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_0674 619b021d25d3ae9d0f8bd8802241262a 339 Gene3D G3DSA:3.90.180.10 13 317 2.4E-99 T 23-10-2018 DLM_0674 619b021d25d3ae9d0f8bd8802241262a 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DLM_0674 619b021d25d3ae9d0f8bd8802241262a 339 Gene3D G3DSA:3.40.50.720 146 282 2.4E-99 T 23-10-2018 DLM_0885 a386e57ec2781bdac3a9c1d1f8faabfd 173 SUPERFAMILY SSF55846 2 159 3.27E-32 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_0885 a386e57ec2781bdac3a9c1d1f8faabfd 173 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 3 152 2.8E-19 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_0885 a386e57ec2781bdac3a9c1d1f8faabfd 173 Gene3D G3DSA:3.40.80.10 2 164 1.6E-35 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_0885 a386e57ec2781bdac3a9c1d1f8faabfd 173 SMART SM00644 2 140 0.0012 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_0885 a386e57ec2781bdac3a9c1d1f8faabfd 173 ProSitePatterns PS00018 EF-hand calcium-binding domain. 134 146 - T 23-10-2018 IPR018247 EF-Hand 1, calcium-binding site DLM_4016 a50463e3fe28951af45efd2712c18882 247 Gene3D G3DSA:1.10.3720.10 19 239 2.6E-47 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4016 a50463e3fe28951af45efd2712c18882 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 113 3.1E-16 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_4016 a50463e3fe28951af45efd2712c18882 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 238 3.9E-25 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4016 a50463e3fe28951af45efd2712c18882 247 SUPERFAMILY SSF161098 24 223 8.76E-41 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.4E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.4E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.4E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.4E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.4E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 SUPERFAMILY SSF51735 3 232 1.3E-65 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 Pfam PF00106 short chain dehydrogenase 8 193 5.3E-54 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 4.2E-5 T 23-10-2018 DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 Gene3D G3DSA:3.40.50.720 2 247 1.2E-68 T 23-10-2018 DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1502 a8be1383b6b98c2b60d32d923dd22b93 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2046 c7a69ef3d84b302d15666caafddffe63 388 SUPERFAMILY SSF56935 21 385 4.19E-49 T 23-10-2018 DLM_2046 c7a69ef3d84b302d15666caafddffe63 388 PRINTS PR00184 Neisseria sp. porin signature 59 84 1.8E-10 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2046 c7a69ef3d84b302d15666caafddffe63 388 PRINTS PR00184 Neisseria sp. porin signature 320 344 1.8E-10 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 DLM_2046 c7a69ef3d84b302d15666caafddffe63 388 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 1.4E-5 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_2046 c7a69ef3d84b302d15666caafddffe63 388 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 57 68 1.4E-5 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_2046 c7a69ef3d84b302d15666caafddffe63 388 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 105 115 1.4E-5 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DLM_2046 c7a69ef3d84b302d15666caafddffe63 388 Gene3D G3DSA:2.40.160.10 14 388 8.7E-62 T 23-10-2018 IPR023614 Porin domain superfamily DLM_2046 c7a69ef3d84b302d15666caafddffe63 388 Pfam PF13609 Gram-negative porin 12 347 9.2E-41 T 23-10-2018 DLM_3763 e014b6b1569f10314a30d15513ad8cfe 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 1.4E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_3763 e014b6b1569f10314a30d15513ad8cfe 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 1.4E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_3763 e014b6b1569f10314a30d15513ad8cfe 90 SUPERFAMILY SSF46689 21 89 4.93E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3763 e014b6b1569f10314a30d15513ad8cfe 90 PIRSF PIRSF002097 3 90 1.1E-33 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DLM_3763 e014b6b1569f10314a30d15513ad8cfe 90 Pfam PF02954 Bacterial regulatory protein, Fis family 50 87 4.2E-16 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_3763 e014b6b1569f10314a30d15513ad8cfe 90 Gene3D G3DSA:1.10.10.60 4 89 2.5E-27 T 23-10-2018 DLM_3227 10e33bd5fb3a475863d08d20cf72659a 208 Pfam PF13410 Glutathione S-transferase, C-terminal domain 99 202 8.1E-7 T 23-10-2018 DLM_3227 10e33bd5fb3a475863d08d20cf72659a 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 79 1.4E-11 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_3227 10e33bd5fb3a475863d08d20cf72659a 208 Gene3D G3DSA:3.40.30.10 4 199 3.5E-59 T 23-10-2018 DLM_3227 10e33bd5fb3a475863d08d20cf72659a 208 Gene3D G3DSA:1.20.1050.10 83 193 3.5E-59 T 23-10-2018 DLM_3227 10e33bd5fb3a475863d08d20cf72659a 208 SUPERFAMILY SSF52833 2 86 1.26E-19 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3227 10e33bd5fb3a475863d08d20cf72659a 208 SUPERFAMILY SSF47616 82 202 1.24E-17 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_3816 7558984901f6cd667bf485da901c8d10 136 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 116 2.6E-21 T 23-10-2018 IPR031982 Type IV minor pilin ComP DLM_3816 7558984901f6cd667bf485da901c8d10 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3816 7558984901f6cd667bf485da901c8d10 136 SUPERFAMILY SSF54523 8 125 2.28E-23 T 23-10-2018 DLM_3816 7558984901f6cd667bf485da901c8d10 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 8.1E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3816 7558984901f6cd667bf485da901c8d10 136 Gene3D G3DSA:3.30.700.10 8 135 3.4E-25 T 23-10-2018 DLM_3816 7558984901f6cd667bf485da901c8d10 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 1.8E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_3160 05603c1bec145252b9590add7dff157b 273 Pfam PF03618 Kinase/pyrophosphorylase 8 264 1.3E-77 T 23-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DLM_3160 05603c1bec145252b9590add7dff157b 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 273 74.79 T 23-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein DLM_3198 1b2eb4e01a4d79a7b5ae690303852309 442 SUPERFAMILY SSF54368 6 102 9.55E-15 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3198 1b2eb4e01a4d79a7b5ae690303852309 442 Gene3D G3DSA:3.30.590.10 108 441 2.1E-100 T 23-10-2018 DLM_3198 1b2eb4e01a4d79a7b5ae690303852309 442 SUPERFAMILY SSF55931 105 439 5.89E-98 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DLM_3198 1b2eb4e01a4d79a7b5ae690303852309 442 SMART SM01230 105 361 1.3E-97 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3198 1b2eb4e01a4d79a7b5ae690303852309 442 Gene3D G3DSA:3.10.20.70 5 106 3.2E-5 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_3198 1b2eb4e01a4d79a7b5ae690303852309 442 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 241 256 - T 23-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DLM_3198 1b2eb4e01a4d79a7b5ae690303852309 442 Pfam PF00120 Glutamine synthetase, catalytic domain 107 436 5.1E-98 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 Gene3D G3DSA:3.55.50.10 111 205 3.4E-59 T 23-10-2018 DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 Gene3D G3DSA:3.30.1920.30 240 302 3.4E-59 T 23-10-2018 DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 Gene3D G3DSA:2.40.50.230 374 458 1.3E-26 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 SUPERFAMILY SSF69279 204 369 6.12E-34 T 23-10-2018 DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 477 579 9.2E-34 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 SUPERFAMILY SSF69255 368 459 6.02E-23 T 23-10-2018 DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 SUPERFAMILY SSF69279 13 201 2.27E-41 T 23-10-2018 DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 597 744 6.1E-37 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 15 501 2.5E-77 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 18 503 2.6E-85 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 Gene3D G3DSA:2.30.110.50 12 345 3.4E-59 T 23-10-2018 DLM_2840 a400a4092195bb9ad39bc8248b650ccc 777 Pfam PF05954 Phage late control gene D protein (GPD) 26 344 6.6E-59 T 23-10-2018 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 SUPERFAMILY SSF48179 239 442 3.74E-62 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 142 3.1E-26 T 23-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 PRINTS PR00084 Mannitol dehydrogenase signature 133 146 4.7E-12 T 23-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 PRINTS PR00084 Mannitol dehydrogenase signature 173 186 4.7E-12 T 23-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 PRINTS PR00084 Mannitol dehydrogenase signature 204 219 4.7E-12 T 23-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 Gene3D G3DSA:3.40.50.720 1 237 6.8E-77 T 23-10-2018 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 Gene3D G3DSA:1.10.1040.10 238 446 9.6E-74 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 171 419 3.5E-84 T 23-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DLM_0676 a508af618f86e8824e5d6b94743febf0 453 SUPERFAMILY SSF51735 5 237 1.26E-66 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2782 4f9e11de4893564dce8eac9537691836 411 Gene3D G3DSA:3.40.50.2300 7 143 8.0E-28 T 23-10-2018 DLM_2782 4f9e11de4893564dce8eac9537691836 411 SUPERFAMILY SSF52172 12 138 6.69E-26 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2782 4f9e11de4893564dce8eac9537691836 411 SUPERFAMILY SSF141868 154 403 5.62E-66 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2782 4f9e11de4893564dce8eac9537691836 411 SMART SM00052 148 395 4.8E-64 T 23-10-2018 IPR001633 EAL domain DLM_2782 4f9e11de4893564dce8eac9537691836 411 Gene3D G3DSA:3.20.20.450 152 404 1.3E-71 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2782 4f9e11de4893564dce8eac9537691836 411 Pfam PF00072 Response regulator receiver domain 15 127 9.0E-21 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2782 4f9e11de4893564dce8eac9537691836 411 SMART SM00448 13 130 3.4E-18 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2782 4f9e11de4893564dce8eac9537691836 411 Pfam PF00563 EAL domain 154 390 4.6E-60 T 23-10-2018 IPR001633 EAL domain DLM_1147 1770de79c5da5b106846198aaa7d90a3 261 SUPERFAMILY SSF48613 22 243 1.05E-32 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DLM_1147 1770de79c5da5b106846198aaa7d90a3 261 Gene3D G3DSA:1.20.910.10 2 256 9.8E-84 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DLM_1147 1770de79c5da5b106846198aaa7d90a3 261 Pfam PF14518 Iron-containing redox enzyme 58 216 1.5E-10 T 23-10-2018 DLM_3386 a35e8f97b8842864cb7d52f32edd2c11 120 SUPERFAMILY SSF158446 5 116 3.4E-34 T 23-10-2018 IPR036583 23S rRNA-intervening sequence superfamily DLM_3386 a35e8f97b8842864cb7d52f32edd2c11 120 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 11 114 2.0E-34 T 23-10-2018 IPR012657 23S rRNA-intervening sequence protein DLM_3386 a35e8f97b8842864cb7d52f32edd2c11 120 Pfam PF05635 23S rRNA-intervening sequence protein 6 94 1.1E-34 T 23-10-2018 IPR012657 23S rRNA-intervening sequence protein DLM_3386 a35e8f97b8842864cb7d52f32edd2c11 120 Gene3D G3DSA:1.20.1440.60 1 119 4.4E-41 T 23-10-2018 IPR036583 23S rRNA-intervening sequence superfamily DLM_3612 29414db1654bac6df7e41332efff588e 259 Pfam PF00486 Transcriptional regulatory protein, C terminal 177 253 2.1E-25 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_3612 29414db1654bac6df7e41332efff588e 259 SUPERFAMILY SSF52172 23 146 1.57E-36 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3612 29414db1654bac6df7e41332efff588e 259 SMART SM00448 27 137 4.5E-37 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3612 29414db1654bac6df7e41332efff588e 259 Pfam PF00072 Response regulator receiver domain 29 138 6.7E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3612 29414db1654bac6df7e41332efff588e 259 SMART SM00862 177 253 1.5E-26 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_3612 29414db1654bac6df7e41332efff588e 259 Gene3D G3DSA:1.10.10.10 146 259 3.5E-37 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3612 29414db1654bac6df7e41332efff588e 259 SUPERFAMILY SSF46894 154 253 3.97E-28 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_3612 29414db1654bac6df7e41332efff588e 259 Gene3D G3DSA:3.40.50.2300 22 145 4.3E-32 T 23-10-2018 DLM_0735 ed759e6b6bd0f512cbceca52b2a026aa 384 Gene3D G3DSA:3.40.190.10 40 330 4.0E-50 T 23-10-2018 DLM_0735 ed759e6b6bd0f512cbceca52b2a026aa 384 Gene3D G3DSA:3.40.190.10 146 284 4.0E-50 T 23-10-2018 DLM_0735 ed759e6b6bd0f512cbceca52b2a026aa 384 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 277 296 4.0E-8 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0735 ed759e6b6bd0f512cbceca52b2a026aa 384 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 187 206 4.0E-8 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0735 ed759e6b6bd0f512cbceca52b2a026aa 384 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 63 84 4.0E-8 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0735 ed759e6b6bd0f512cbceca52b2a026aa 384 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 137 153 4.0E-8 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_0735 ed759e6b6bd0f512cbceca52b2a026aa 384 SUPERFAMILY SSF53850 34 357 3.19E-52 T 23-10-2018 DLM_0735 ed759e6b6bd0f512cbceca52b2a026aa 384 Pfam PF13416 Bacterial extracellular solute-binding protein 58 331 3.7E-21 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 Gene3D G3DSA:3.40.190.10 94 276 3.8E-41 T 23-10-2018 DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 Gene3D G3DSA:3.40.190.10 165 267 3.8E-41 T 23-10-2018 DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.7E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 Gene3D G3DSA:1.10.10.10 4 93 1.6E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 Pfam PF03466 LysR substrate binding domain 91 280 9.6E-47 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 SUPERFAMILY SSF46785 4 112 3.1E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3608 0ff9ce35819a8fa41f5991f506b520e5 288 SUPERFAMILY SSF53850 93 284 4.48E-44 T 23-10-2018 DLM_2391 9f308940c90ff3583bddf1efd5470ad0 219 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 45 1.4E-12 T 23-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal DLM_2391 9f308940c90ff3583bddf1efd5470ad0 219 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 201 1.9E-52 T 23-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 DLM_2391 9f308940c90ff3583bddf1efd5470ad0 219 Gene3D G3DSA:3.30.70.2660 1 219 1.4E-72 T 23-10-2018 DLM_2391 9f308940c90ff3583bddf1efd5470ad0 219 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 3 206 2.5E-51 T 23-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 DLM_3499 1009e82c53ef5520405aff02e2d61d2f 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 253 5.9E-59 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3499 1009e82c53ef5520405aff02e2d61d2f 259 SUPERFAMILY SSF53850 1 256 4.04E-65 T 23-10-2018 DLM_3499 1009e82c53ef5520405aff02e2d61d2f 259 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 252 1.2E-81 T 23-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 DLM_3499 1009e82c53ef5520405aff02e2d61d2f 259 Gene3D G3DSA:3.40.190.10 112 212 7.9E-78 T 23-10-2018 DLM_3499 1009e82c53ef5520405aff02e2d61d2f 259 Gene3D G3DSA:3.40.190.10 28 251 7.9E-78 T 23-10-2018 DLM_3499 1009e82c53ef5520405aff02e2d61d2f 259 SMART SM00062 26 255 1.6E-64 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3499 1009e82c53ef5520405aff02e2d61d2f 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 23-10-2018 IPR018313 Solute-binding protein family 3, conserved site DLM_3878 1594ee0699f7d7ad60ffe375316eb01e 344 Gene3D G3DSA:3.40.800.20 1 342 2.1E-120 T 23-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_3878 1594ee0699f7d7ad60ffe375316eb01e 344 SUPERFAMILY SSF52768 2 340 5.76E-87 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily DLM_3878 1594ee0699f7d7ad60ffe375316eb01e 344 PRINTS PR01270 Histone deacetylase superfamily signature 156 179 1.4E-14 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_3878 1594ee0699f7d7ad60ffe375316eb01e 344 PRINTS PR01270 Histone deacetylase superfamily signature 275 285 1.4E-14 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_3878 1594ee0699f7d7ad60ffe375316eb01e 344 PRINTS PR01270 Histone deacetylase superfamily signature 189 204 1.4E-14 T 23-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_3878 1594ee0699f7d7ad60ffe375316eb01e 344 Pfam PF00850 Histone deacetylase domain 28 338 1.7E-61 T 23-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DLM_4492 a49fca03490a170ee24070a93e1313e9 300 SUPERFAMILY SSF103481 54 142 1.83E-9 T 23-10-2018 DLM_4492 a49fca03490a170ee24070a93e1313e9 300 SUPERFAMILY SSF103481 196 286 6.41E-7 T 23-10-2018 DLM_4492 a49fca03490a170ee24070a93e1313e9 300 Pfam PF00892 EamA-like transporter family 156 286 1.1E-9 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_4492 a49fca03490a170ee24070a93e1313e9 300 Pfam PF00892 EamA-like transporter family 9 139 8.4E-11 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 Pfam PF01019 Gamma-glutamyltranspeptidase 53 567 3.2E-151 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 410 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 152 171 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 475 492 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 450 465 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 134 152 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 283 302 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 414 432 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 269 4.1E-63 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 Gene3D G3DSA:3.60.20.40 387 571 3.0E-52 T 23-10-2018 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 SUPERFAMILY SSF56235 29 571 3.09E-166 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 40 564 1.7E-114 T 23-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 DLM_4231 04a1943683eaf4caa175fbbc7f4c85be 572 Gene3D G3DSA:1.10.246.130 269 386 1.0E-41 T 23-10-2018 DLM_2340 e4ae7c313d4138c62c3c7ca4e6d709c9 113 Gene3D G3DSA:3.30.2320.80 1 113 5.9E-31 T 23-10-2018 DLM_2340 e4ae7c313d4138c62c3c7ca4e6d709c9 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 3.7E-34 T 23-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 DLM_2340 e4ae7c313d4138c62c3c7ca4e6d709c9 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 2.7E-32 T 23-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 DLM_2340 e4ae7c313d4138c62c3c7ca4e6d709c9 113 PIRSF PIRSF004761 1 113 9.2E-39 T 23-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 DLM_2340 e4ae7c313d4138c62c3c7ca4e6d709c9 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 23-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site DLM_2340 e4ae7c313d4138c62c3c7ca4e6d709c9 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 21.005 T 23-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 DLM_4126 b86028868a3d42dbb36248c4c5a72b17 193 Pfam PF06736 Protein of unknown function (DUF1211) 5 89 5.3E-31 T 23-10-2018 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 DLM_0582 a8dc7648b0ad640310965c508dabf6c9 433 Gene3D G3DSA:1.10.760.10 56 227 6.5E-45 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0582 a8dc7648b0ad640310965c508dabf6c9 433 SUPERFAMILY SSF46626 226 422 1.75E-27 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0582 a8dc7648b0ad640310965c508dabf6c9 433 Pfam PF03150 Di-haem cytochrome c peroxidase 64 243 7.4E-34 T 23-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 DLM_0582 a8dc7648b0ad640310965c508dabf6c9 433 Gene3D G3DSA:1.10.760.10 231 431 1.2E-48 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0582 a8dc7648b0ad640310965c508dabf6c9 433 SUPERFAMILY SSF46626 53 223 3.18E-27 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2860 7d1efc5e42619bae5758d61a0b31f880 336 Pfam PF02504 Fatty acid synthesis protein 1 314 1.8E-106 T 23-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DLM_2860 7d1efc5e42619bae5758d61a0b31f880 336 PIRSF PIRSF002465 1 329 6.2E-128 T 23-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DLM_2860 7d1efc5e42619bae5758d61a0b31f880 336 Gene3D G3DSA:3.40.718.10 1 334 9.7E-128 T 23-10-2018 DLM_2860 7d1efc5e42619bae5758d61a0b31f880 336 SUPERFAMILY SSF53659 1 325 8.22E-106 T 23-10-2018 DLM_2860 7d1efc5e42619bae5758d61a0b31f880 336 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 329 150.895 T 23-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DLM_2860 7d1efc5e42619bae5758d61a0b31f880 336 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 324 3.3E-108 T 23-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DLM_2741 f839ff9ac251ceb63d24fe5e55f824ce 666 SUPERFAMILY SSF81345 17 328 1.1E-55 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_2741 f839ff9ac251ceb63d24fe5e55f824ce 666 Gene3D G3DSA:1.10.3470.10 343 658 7.6E-66 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_2741 f839ff9ac251ceb63d24fe5e55f824ce 666 SUPERFAMILY SSF81345 347 655 1.26E-57 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_2741 f839ff9ac251ceb63d24fe5e55f824ce 666 Pfam PF01032 FecCD transport family 49 328 2.6E-61 T 23-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DLM_2741 f839ff9ac251ceb63d24fe5e55f824ce 666 Pfam PF01032 FecCD transport family 356 655 8.4E-65 T 23-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DLM_2741 f839ff9ac251ceb63d24fe5e55f824ce 666 Gene3D G3DSA:1.10.3470.10 16 333 1.4E-62 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_2891 d705521517640a6dcdffa66a0decd581 121 SMART SM00448 3 116 7.0E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2891 d705521517640a6dcdffa66a0decd581 121 SUPERFAMILY SSF52172 3 120 3.42E-37 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2891 d705521517640a6dcdffa66a0decd581 121 Pfam PF00072 Response regulator receiver domain 5 116 3.5E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2891 d705521517640a6dcdffa66a0decd581 121 Gene3D G3DSA:3.40.50.12740 1 121 8.3E-38 T 23-10-2018 DLM_4118 33641b0430e53664dd1f592851efda66 457 PIRSF PIRSF000204 1 457 1.8E-202 T 23-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 DLM_4118 33641b0430e53664dd1f592851efda66 457 SUPERFAMILY SSF52467 284 453 3.27E-75 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DLM_4118 33641b0430e53664dd1f592851efda66 457 Gene3D G3DSA:3.40.50.1220 281 455 1.0E-83 T 23-10-2018 DLM_4118 33641b0430e53664dd1f592851efda66 457 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 453 5.7E-189 T 23-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 SUPERFAMILY SSF47364 76 155 2.75E-22 T 23-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 Pfam PF00448 SRP54-type protein, GTPase domain 175 374 1.2E-73 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 348 361 - T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 Pfam PF02881 SRP54-type protein, helical bundle domain 90 157 7.4E-13 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 Gene3D G3DSA:1.20.120.140 79 373 1.2E-111 T 23-10-2018 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 Gene3D G3DSA:3.40.50.300 175 363 1.2E-111 T 23-10-2018 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 104 374 4.6E-107 T 23-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 104 375 62.034 T 23-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 SMART SM00962 175 375 2.3E-115 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 SMART SM00382 174 353 9.9E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4367 989054b0dbeeffb718de4a0507a82920 375 SMART SM00963 81 161 2.2E-23 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DLM_4367 989054b0dbeeffb718de4a0507a82920 375 SUPERFAMILY SSF52540 171 374 3.12E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 Gene3D G3DSA:3.20.20.70 19 327 1.5E-117 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 SUPERFAMILY SSF102114 20 326 1.14E-87 T 23-10-2018 DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 TIGRFAM TIGR00433 bioB: biotin synthase 29 324 6.6E-119 T 23-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 Hamap MF_01694 Biotin synthase [bioB]. 19 327 40.553 T 23-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 SMART SM00876 234 326 1.2E-42 T 23-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 234 324 4.2E-17 T 23-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 PIRSF PIRSF001619 2 327 5.5E-126 T 23-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 SMART SM00729 57 263 3.6E-32 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_4164 700211a46e1f26e3e9af0b70f954e9b3 327 Pfam PF04055 Radical SAM superfamily 64 217 2.7E-15 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_0487 78cf3da5f0842c9d52159fbecee93151 359 PIRSF PIRSF006078 1 356 3.7E-86 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DLM_0487 78cf3da5f0842c9d52159fbecee93151 359 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 1 351 2.6E-86 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DLM_0487 78cf3da5f0842c9d52159fbecee93151 359 Gene3D G3DSA:3.40.50.10350 1 340 1.7E-92 T 23-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold DLM_0487 78cf3da5f0842c9d52159fbecee93151 359 Pfam PF02595 Glycerate kinase family 1 351 1.7E-97 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DLM_0487 78cf3da5f0842c9d52159fbecee93151 359 SUPERFAMILY SSF110738 1 351 1.7E-85 T 23-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 DLM_0487 78cf3da5f0842c9d52159fbecee93151 359 Gene3D G3DSA:3.90.1510.10 24 254 1.7E-92 T 23-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 Gene3D G3DSA:3.30.9.50 78 263 1.5E-92 T 23-10-2018 DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.2E-21 T 23-10-2018 DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 2.2E-21 T 23-10-2018 DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 2.2E-21 T 23-10-2018 DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 2.2E-21 T 23-10-2018 DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 288 301 - T 23-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 Pfam PF01494 FAD binding domain 147 334 3.5E-21 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 SUPERFAMILY SSF51905 3 381 3.65E-58 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 Gene3D G3DSA:3.50.50.60 5 328 1.5E-92 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0989 58d4bf495a5d96a828bf789602d0abba 382 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 381 4.6E-114 T 23-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DLM_2499 d0d19e37acd8f713ef1c31a8c7265d19 133 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 17 33 - T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DLM_2499 d0d19e37acd8f713ef1c31a8c7265d19 133 Gene3D G3DSA:3.30.160.20 2 133 5.6E-37 T 23-10-2018 DLM_2499 d0d19e37acd8f713ef1c31a8c7265d19 133 SUPERFAMILY SSF75620 4 100 7.45E-11 T 23-10-2018 DLM_2499 d0d19e37acd8f713ef1c31a8c7265d19 133 Pfam PF00472 RF-1 domain 6 128 2.1E-22 T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DLM_0433 7120618af195c15e04951cebc52274ed 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.365 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DLM_0433 7120618af195c15e04951cebc52274ed 150 SUPERFAMILY SSF69500 1 146 6.54E-52 T 23-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DLM_0433 7120618af195c15e04951cebc52274ed 150 Gene3D G3DSA:3.50.80.10 1 148 6.5E-54 T 23-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DLM_0433 7120618af195c15e04951cebc52274ed 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 1.2E-50 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DLM_0433 7120618af195c15e04951cebc52274ed 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 145 4.6E-54 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DLM_4414 d54eca95e5983f82fd39b7a24c04ebd2 131 PIRSF PIRSF002131 1 131 1.5E-52 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DLM_4414 d54eca95e5983f82fd39b7a24c04ebd2 131 Gene3D G3DSA:3.30.420.80 3 131 9.4E-57 T 23-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4414 d54eca95e5983f82fd39b7a24c04ebd2 131 ProSitePatterns PS00054 Ribosomal protein S11 signature. 99 121 - T 23-10-2018 IPR018102 Ribosomal S11, conserved site DLM_4414 d54eca95e5983f82fd39b7a24c04ebd2 131 SUPERFAMILY SSF53137 17 131 2.4E-48 T 23-10-2018 DLM_4414 d54eca95e5983f82fd39b7a24c04ebd2 131 Pfam PF00411 Ribosomal protein S11 21 130 4.5E-51 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DLM_4414 d54eca95e5983f82fd39b7a24c04ebd2 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 131 32.917 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DLM_4414 d54eca95e5983f82fd39b7a24c04ebd2 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 128 2.3E-56 T 23-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_0748 f89e6936b7e1a21f2d353ac54e9346bd 276 Gene3D G3DSA:2.40.440.10 1 217 1.3E-55 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DLM_0748 f89e6936b7e1a21f2d353ac54e9346bd 276 Pfam PF03734 L,D-transpeptidase catalytic domain 13 148 4.8E-24 T 23-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DLM_0748 f89e6936b7e1a21f2d353ac54e9346bd 276 SUPERFAMILY SSF141523 11 148 7.85E-29 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DLM_4088 74da340352d576dec4b8db5e5702cda2 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 6.2E-24 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 6.2E-24 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 6.2E-24 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 6.2E-24 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 Gene3D G3DSA:1.10.287.950 210 541 7.7E-72 T 23-10-2018 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 SUPERFAMILY SSF58104 231 540 5.36E-72 T 23-10-2018 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 SMART SM00304 480 536 110.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 SMART SM00304 210 263 5.2E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 506 7.0E-43 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 SMART SM00283 278 539 1.0E-61 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4088 74da340352d576dec4b8db5e5702cda2 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 183 5.5E-18 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_1150 f497c8459c58f458d43973d4117a5683 283 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 31 177 2.9E-12 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DLM_1150 f497c8459c58f458d43973d4117a5683 283 SUPERFAMILY SSF52540 11 211 8.74E-34 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1150 f497c8459c58f458d43973d4117a5683 283 SMART SM00382 27 186 2.8E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1150 f497c8459c58f458d43973d4117a5683 283 Gene3D G3DSA:3.40.50.300 4 203 3.6E-27 T 23-10-2018 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 105 3.1E-36 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 PIRSF PIRSF000149 1 336 1.4E-131 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 2.6E-34 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 2.6E-34 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 2.6E-34 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 2.6E-34 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 2.6E-34 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 SMART SM00846 3 154 4.7E-91 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 8.3E-123 T 23-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 2.7E-61 T 23-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 SUPERFAMILY SSF51735 1 173 5.27E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 23-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 Gene3D G3DSA:3.40.50.720 4 327 1.6E-139 T 23-10-2018 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 SUPERFAMILY SSF55347 154 316 5.36E-64 T 23-10-2018 DLM_3750 3bc3394d2828dc5405ddbed9bfe7085b 336 Gene3D G3DSA:3.30.360.10 153 317 1.6E-139 T 23-10-2018 DLM_0241 9791562ee6ad5a18068c69b35d07bd1d 139 Gene3D G3DSA:3.30.420.270 60 132 1.4E-8 T 23-10-2018 DLM_0241 9791562ee6ad5a18068c69b35d07bd1d 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 136 2.6E-26 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DLM_1142 8a869ebdb867486e0b2a3878195f3361 226 PIRSF PIRSF001461 1 226 3.8E-104 T 23-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DLM_1142 8a869ebdb867486e0b2a3878195f3361 226 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DLM_1142 8a869ebdb867486e0b2a3878195f3361 226 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 219 6.6E-96 T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DLM_1142 8a869ebdb867486e0b2a3878195f3361 226 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DLM_1142 8a869ebdb867486e0b2a3878195f3361 226 Gene3D G3DSA:3.20.20.70 2 226 1.6E-81 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1142 8a869ebdb867486e0b2a3878195f3361 226 SUPERFAMILY SSF51366 4 221 4.3E-74 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DLM_1142 8a869ebdb867486e0b2a3878195f3361 226 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 206 1.0E-88 T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DLM_1240 972c045df2b4d6ee37ed6f5aaea92320 121 Gene3D G3DSA:3.40.50.2300 1 120 2.2E-34 T 23-10-2018 DLM_1240 972c045df2b4d6ee37ed6f5aaea92320 121 Pfam PF00072 Response regulator receiver domain 4 114 1.1E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1240 972c045df2b4d6ee37ed6f5aaea92320 121 SMART SM00448 2 114 1.8E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1240 972c045df2b4d6ee37ed6f5aaea92320 121 SUPERFAMILY SSF52172 1 118 7.83E-36 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2654 df8455c2c5bac3a8dd988205596b274f 169 Gene3D G3DSA:3.90.960.10 1 156 8.8E-43 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_2654 df8455c2c5bac3a8dd988205596b274f 169 Pfam PF04073 Aminoacyl-tRNA editing domain 26 138 2.4E-26 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DLM_2654 df8455c2c5bac3a8dd988205596b274f 169 SUPERFAMILY SSF55826 5 152 1.02E-37 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_0617 d67c7ba086d41d46b6176bafa1a681fc 259 Gene3D G3DSA:3.90.850.10 37 251 1.7E-75 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_0617 d67c7ba086d41d46b6176bafa1a681fc 259 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 248 7.6E-117 T 23-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 DLM_0617 d67c7ba086d41d46b6176bafa1a681fc 259 SUPERFAMILY SSF56529 40 250 3.4E-72 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_0617 d67c7ba086d41d46b6176bafa1a681fc 259 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 48 245 1.2E-58 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DLM_0090 4953684a75e63bc97d447ccebcfce251 156 SUPERFAMILY SSF55729 43 150 1.43E-20 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_0090 4953684a75e63bc97d447ccebcfce251 156 Pfam PF00583 Acetyltransferase (GNAT) family 56 144 2.7E-10 T 23-10-2018 IPR000182 GNAT domain DLM_0090 4953684a75e63bc97d447ccebcfce251 156 Gene3D G3DSA:3.40.630.30 13 156 1.6E-21 T 23-10-2018 DLM_3586 85eabe6fff477f08061a4d6de18879ce 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 321 4.6E-45 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_0774 30f7aa9b6c822dfffecf9aaf2c269f72 173 SMART SM00644 2 140 0.0013 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_0774 30f7aa9b6c822dfffecf9aaf2c269f72 173 SUPERFAMILY SSF55846 2 159 6.41E-31 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_0774 30f7aa9b6c822dfffecf9aaf2c269f72 173 ProSitePatterns PS00018 EF-hand calcium-binding domain. 134 146 - T 23-10-2018 IPR018247 EF-Hand 1, calcium-binding site DLM_0774 30f7aa9b6c822dfffecf9aaf2c269f72 173 Gene3D G3DSA:3.40.80.10 2 164 4.5E-35 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_0774 30f7aa9b6c822dfffecf9aaf2c269f72 173 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 3 152 3.0E-19 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 Gene3D G3DSA:3.40.50.12780 59 522 9.1E-110 T 23-10-2018 DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 Gene3D G3DSA:3.30.300.30 525 654 1.1E-27 T 23-10-2018 DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 Pfam PF13193 AMP-binding enzyme C-terminal domain 538 619 4.7E-27 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 SUPERFAMILY SSF56801 21 645 5.63E-179 T 23-10-2018 DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 654 52.104 T 23-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 651 3.4E-302 T 23-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 Pfam PF00501 AMP-binding enzyme 95 529 1.6E-97 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 ProSitePatterns PS00455 Putative AMP-binding domain signature. 266 277 - T 23-10-2018 IPR020845 AMP-binding, conserved site DLM_0667 5a99cb60d6c0f11b5daba0394e0849f4 654 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 1.5E-19 T 23-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DLM_3438 13bcab473691bf288daed9bd6f0a3c17 515 Pfam PF00474 Sodium:solute symporter family 32 436 8.7E-90 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DLM_3438 13bcab473691bf288daed9bd6f0a3c17 515 Gene3D G3DSA:1.20.1730.10 21 490 1.2E-53 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily DLM_2914 3a1c589dcf0ad2c8c77a629420a50410 151 Gene3D G3DSA:2.40.280.10 1 124 4.1E-42 T 23-10-2018 IPR023620 Small protein B DLM_2914 3a1c589dcf0ad2c8c77a629420a50410 151 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 23-10-2018 IPR020081 SsrA-binding protein, conserved site DLM_2914 3a1c589dcf0ad2c8c77a629420a50410 151 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 145 1.9E-49 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 DLM_2914 3a1c589dcf0ad2c8c77a629420a50410 151 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 1.0E-56 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 DLM_2914 3a1c589dcf0ad2c8c77a629420a50410 151 Hamap MF_00023 SsrA-binding protein [smpB]. 1 149 66.344 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 DLM_2914 3a1c589dcf0ad2c8c77a629420a50410 151 SUPERFAMILY SSF74982 3 127 1.18E-44 T 23-10-2018 IPR023620 Small protein B DLM_2914 3a1c589dcf0ad2c8c77a629420a50410 151 Pfam PF01668 SmpB protein 3 146 5.4E-54 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 DLM_4559 74a0f45af0bc6af39e580be4b4dac3f3 432 Pfam PF00534 Glycosyl transferases group 1 174 325 1.3E-8 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 DLM_4559 74a0f45af0bc6af39e580be4b4dac3f3 432 SUPERFAMILY SSF53756 18 352 1.3E-27 T 23-10-2018 DLM_4559 74a0f45af0bc6af39e580be4b4dac3f3 432 Gene3D G3DSA:3.40.50.2000 334 346 8.9E-18 T 23-10-2018 DLM_4559 74a0f45af0bc6af39e580be4b4dac3f3 432 Gene3D G3DSA:3.40.50.2000 178 333 8.9E-18 T 23-10-2018 DLM_0435 7a634194e0cfa9f58a9a7a7783e22d05 252 Gene3D G3DSA:3.60.15.10 1 251 1.7E-80 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_0435 7a634194e0cfa9f58a9a7a7783e22d05 252 SMART SM00849 12 163 1.8E-31 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_0435 7a634194e0cfa9f58a9a7a7783e22d05 252 SUPERFAMILY SSF56281 3 251 1.31E-64 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_0435 7a634194e0cfa9f58a9a7a7783e22d05 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 164 251 1.1E-23 T 23-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DLM_0435 7a634194e0cfa9f58a9a7a7783e22d05 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 251 1.1E-90 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DLM_0435 7a634194e0cfa9f58a9a7a7783e22d05 252 PIRSF PIRSF005457 1 251 1.5E-85 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DLM_0435 7a634194e0cfa9f58a9a7a7783e22d05 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 163 3.6E-15 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_0435 7a634194e0cfa9f58a9a7a7783e22d05 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 251 41.359 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DLM_0990 7bb0268dd4b9ac3437831053563d0c39 245 Pfam PF13098 Thioredoxin-like domain 117 242 1.9E-26 T 23-10-2018 IPR012336 Thioredoxin-like fold DLM_0990 7bb0268dd4b9ac3437831053563d0c39 245 Gene3D G3DSA:3.10.450.70 28 91 4.4E-6 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 DLM_0990 7bb0268dd4b9ac3437831053563d0c39 245 SUPERFAMILY SSF54423 33 88 8.04E-10 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 DLM_0990 7bb0268dd4b9ac3437831053563d0c39 245 SUPERFAMILY SSF52833 96 243 9.29E-31 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_0990 7bb0268dd4b9ac3437831053563d0c39 245 Pfam PF10411 Disulfide bond isomerase protein N-terminus 34 88 6.8E-20 T 23-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DLM_0990 7bb0268dd4b9ac3437831053563d0c39 245 Gene3D G3DSA:3.40.30.10 108 245 4.0E-35 T 23-10-2018 DLM_0938 c277201b399024aab53bb41e011f7150 129 SUPERFAMILY SSF52172 4 125 8.68E-35 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0938 c277201b399024aab53bb41e011f7150 129 SMART SM00448 6 120 7.6E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_0938 c277201b399024aab53bb41e011f7150 129 Gene3D G3DSA:3.40.50.2300 1 126 4.8E-38 T 23-10-2018 DLM_0938 c277201b399024aab53bb41e011f7150 129 Pfam PF00072 Response regulator receiver domain 9 120 1.7E-30 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1021 570a0ac98deff546dd1169963da08908 441 Pfam PF07690 Major Facilitator Superfamily 22 385 5.9E-54 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1021 570a0ac98deff546dd1169963da08908 441 SUPERFAMILY SSF103473 8 422 2.88E-76 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1021 570a0ac98deff546dd1169963da08908 441 Gene3D G3DSA:1.20.1250.20 225 423 8.4E-27 T 23-10-2018 DLM_1021 570a0ac98deff546dd1169963da08908 441 Gene3D G3DSA:1.20.1250.20 7 204 5.9E-47 T 23-10-2018 DLM_4498 1e7f02b4f862501ea19f15a471aa7dd4 763 SUPERFAMILY SSF56281 505 729 3.8E-36 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_4498 1e7f02b4f862501ea19f15a471aa7dd4 763 Pfam PF00753 Metallo-beta-lactamase superfamily 514 594 5.9E-7 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_4498 1e7f02b4f862501ea19f15a471aa7dd4 763 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 137 729 1.2E-92 T 23-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 DLM_4498 1e7f02b4f862501ea19f15a471aa7dd4 763 Pfam PF13567 Domain of unknown function (DUF4131) 26 179 7.2E-27 T 23-10-2018 IPR025405 Domain of unknown function DUF4131 DLM_4498 1e7f02b4f862501ea19f15a471aa7dd4 763 Gene3D G3DSA:3.60.15.10 506 736 9.3E-45 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_4498 1e7f02b4f862501ea19f15a471aa7dd4 763 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 243 419 1.3E-20 T 23-10-2018 IPR004477 ComEC/Rec2-related protein DLM_4498 1e7f02b4f862501ea19f15a471aa7dd4 763 SMART SM00849 517 675 5.2E-6 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_4498 1e7f02b4f862501ea19f15a471aa7dd4 763 Pfam PF03772 Competence protein 221 477 1.0E-53 T 23-10-2018 IPR004477 ComEC/Rec2-related protein DLM_2539 bd3e9a732ab4b0ffcb9270ba4a53d920 298 Gene3D G3DSA:1.10.600.10 5 298 2.2E-94 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily DLM_2539 bd3e9a732ab4b0ffcb9270ba4a53d920 298 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 217 229 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site DLM_2539 bd3e9a732ab4b0ffcb9270ba4a53d920 298 SUPERFAMILY SSF48576 5 291 1.53E-85 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily DLM_2539 bd3e9a732ab4b0ffcb9270ba4a53d920 298 Pfam PF00348 Polyprenyl synthetase 33 269 2.7E-54 T 23-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DLM_2539 bd3e9a732ab4b0ffcb9270ba4a53d920 298 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 100 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site DLM_2337 ff08b24562e70bd4c78b5798f8794d49 74 Pfam PF00301 Rubredoxin 21 67 4.8E-22 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 DLM_2337 ff08b24562e70bd4c78b5798f8794d49 74 Gene3D G3DSA:2.20.28.10 19 73 3.9E-23 T 23-10-2018 DLM_2337 ff08b24562e70bd4c78b5798f8794d49 74 ProSitePatterns PS00202 Rubredoxin signature. 51 61 - T 23-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 DLM_2337 ff08b24562e70bd4c78b5798f8794d49 74 SUPERFAMILY SSF57802 19 71 5.22E-21 T 23-10-2018 DLM_2337 ff08b24562e70bd4c78b5798f8794d49 74 PRINTS PR00163 Rubredoxin signature 21 37 2.5E-10 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 DLM_2337 ff08b24562e70bd4c78b5798f8794d49 74 PRINTS PR00163 Rubredoxin signature 51 67 2.5E-10 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 PIRSF PIRSF000097 111 274 1.3E-44 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 PIRSF PIRSF000097 1 112 8.0E-36 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 SUPERFAMILY SSF51430 2 264 2.49E-91 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 23-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 Pfam PF00248 Aldo/keto reductase family 22 257 2.8E-46 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 23-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 Gene3D G3DSA:3.20.20.100 1 282 9.3E-119 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 5.3E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 5.3E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 5.3E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 5.3E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_1213 98c529f9735ea3470a15ca4f4af0ab2a 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 5.3E-45 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 262 441 1.9E-17 T 23-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 Gene3D G3DSA:3.40.50.150 77 436 3.7E-99 T 23-10-2018 DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 Gene3D G3DSA:3.40.1350.30 124 271 3.7E-99 T 23-10-2018 DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 Gene3D G3DSA:2.40.50.140 1 76 9.7E-21 T 23-10-2018 DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 371 402 - T 23-10-2018 IPR030390 RNA methyltransferase TrmA, active site DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 424 434 - T 23-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 SUPERFAMILY SSF50249 8 62 8.0E-11 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 7 442 67.556 T 23-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 DLM_0746 2ee135c6fa90afb63ea10e9e36397fff 529 SUPERFAMILY SSF53335 64 441 1.15E-77 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0049 039cf92821072fdf9d7226ffa0407f69 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 117 8.2E-39 T 23-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_0049 039cf92821072fdf9d7226ffa0407f69 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.043 T 23-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 DLM_0049 039cf92821072fdf9d7226ffa0407f69 118 Gene3D G3DSA:1.20.58.1610 1 118 3.4E-44 T 23-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2537 cd79c35f185962114d746f7b33341779 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.4E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.4E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.4E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.4E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.4E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_2537 cd79c35f185962114d746f7b33341779 277 Pfam PF00106 short chain dehydrogenase 6 187 2.2E-44 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 SUPERFAMILY SSF51735 6 249 2.84E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2537 cd79c35f185962114d746f7b33341779 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.2E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.2E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.2E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2537 cd79c35f185962114d746f7b33341779 277 Gene3D G3DSA:3.40.50.720 6 266 1.2E-65 T 23-10-2018 DLM_2408 69619c7a3e43c44fae9bd5706c60bc22 371 Gene3D G3DSA:3.20.20.105 1 369 1.7E-164 T 23-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DLM_2408 69619c7a3e43c44fae9bd5706c60bc22 371 SUPERFAMILY SSF51713 1 364 2.62E-157 T 23-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DLM_2408 69619c7a3e43c44fae9bd5706c60bc22 371 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 366 3.3E-156 T 23-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DLM_2408 69619c7a3e43c44fae9bd5706c60bc22 371 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 365 56.245 T 23-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DLM_2408 69619c7a3e43c44fae9bd5706c60bc22 371 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 366 8.0E-164 T 23-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DLM_2408 69619c7a3e43c44fae9bd5706c60bc22 371 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 361 3.8E-91 T 23-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DLM_2606 904029bebf8c35ab1ed9481e543db181 240 SUPERFAMILY SSF56235 5 238 2.47E-34 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_2606 904029bebf8c35ab1ed9481e543db181 240 PIRSF PIRSF009120 1 240 1.7E-101 T 23-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 DLM_2606 904029bebf8c35ab1ed9481e543db181 240 Pfam PF00227 Proteasome subunit 39 182 6.2E-5 T 23-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DLM_2606 904029bebf8c35ab1ed9481e543db181 240 Gene3D G3DSA:3.60.20.10 1 230 3.0E-25 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_2230 f322fd6b1e54b3968986a792f1a9384e 757 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 262 382 1.3E-15 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_2230 f322fd6b1e54b3968986a792f1a9384e 757 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 64 248 3.4E-11 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_1868 26eff02f78fc63ea7f17b0a420ce4fdc 224 Pfam PF01810 LysE type translocator 35 213 8.4E-37 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_0089 d4e0bc2988b0e7e866930af75b63c4cb 362 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 199 210 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_0089 d4e0bc2988b0e7e866930af75b63c4cb 362 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 18 355 9.2E-140 T 23-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DLM_0089 d4e0bc2988b0e7e866930af75b63c4cb 362 Pfam PF08331 Domain of unknown function (DUF1730) 67 146 5.6E-21 T 23-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 DLM_0089 d4e0bc2988b0e7e866930af75b63c4cb 362 Gene3D G3DSA:3.30.70.20 205 270 3.1E-5 T 23-10-2018 DLM_0089 d4e0bc2988b0e7e866930af75b63c4cb 362 SUPERFAMILY SSF54862 176 292 3.72E-18 T 23-10-2018 DLM_0089 d4e0bc2988b0e7e866930af75b63c4cb 362 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 11 321 46.517 T 23-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DLM_0089 d4e0bc2988b0e7e866930af75b63c4cb 362 Pfam PF13484 4Fe-4S double cluster binding domain 198 262 1.2E-20 T 23-10-2018 DLM_3190 63aaf7d83f500c78a749823089a8cc8b 253 Pfam PF02517 CAAX protease self-immunity 155 236 1.5E-7 T 23-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 Pfam PF00175 Oxidoreductase NAD-binding domain 118 234 6.9E-14 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 Gene3D G3DSA:3.40.50.80 103 259 7.6E-40 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 Pfam PF00970 Oxidoreductase FAD-binding domain 22 96 1.0E-7 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 165 3.2E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 3.2E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 57 64 3.2E-5 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 SUPERFAMILY SSF63380 9 105 6.27E-23 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 SUPERFAMILY SSF52343 109 258 1.7E-34 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DLM_3393 dd3db29872a90a36d3cdd0c77a7b8860 259 Gene3D G3DSA:2.40.30.10 1 102 5.8E-30 T 23-10-2018 DLM_2508 5bdda45ba4954d0ab951e64736dabed8 258 Pfam PF13230 Glutamine amidotransferases class-II 1 254 7.8E-123 T 23-10-2018 IPR026869 Putative glutamine amidotransferase type 2 DLM_2508 5bdda45ba4954d0ab951e64736dabed8 258 SUPERFAMILY SSF56235 2 250 1.54E-48 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_2508 5bdda45ba4954d0ab951e64736dabed8 258 Gene3D G3DSA:3.60.20.10 1 257 4.4E-101 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_2856 802a3512dafd9d6856a4a591cb318955 79 SUPERFAMILY SSF47336 2 77 1.57E-24 T 23-10-2018 IPR036736 ACP-like superfamily DLM_2856 802a3512dafd9d6856a4a591cb318955 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-10-2018 IPR006162 Phosphopantetheine attachment site DLM_2856 802a3512dafd9d6856a4a591cb318955 79 Gene3D G3DSA:1.10.1200.10 1 79 7.1E-30 T 23-10-2018 IPR036736 ACP-like superfamily DLM_2856 802a3512dafd9d6856a4a591cb318955 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 5.1E-35 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DLM_2856 802a3512dafd9d6856a4a591cb318955 79 SMART SM00823 Phosphopantetheine attachment site 5 77 0.0093 T 23-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DLM_2856 802a3512dafd9d6856a4a591cb318955 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.575 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DLM_2856 802a3512dafd9d6856a4a591cb318955 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 3.8E-17 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain DLM_2856 802a3512dafd9d6856a4a591cb318955 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 5.0E-4 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DLM_0794 e907353772caf3ab2adbfcaa4bbb3ada 1404 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 471 544 5.5E-19 T 23-10-2018 IPR013491 Caudovirus, tape measure, N-terminal DLM_1647 b1bd8ba6860c852e5f841b3d5c3a44b6 498 Gene3D G3DSA:3.40.605.10 25 492 9.0E-179 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_1647 b1bd8ba6860c852e5f841b3d5c3a44b6 498 SUPERFAMILY SSF53720 18 497 3.8E-167 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_1647 b1bd8ba6860c852e5f841b3d5c3a44b6 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_1647 b1bd8ba6860c852e5f841b3d5c3a44b6 498 Gene3D G3DSA:3.40.309.10 272 464 9.0E-179 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_1647 b1bd8ba6860c852e5f841b3d5c3a44b6 498 Pfam PF00171 Aldehyde dehydrogenase family 36 493 4.5E-171 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0175 8869ca1eaddf171932af2980c8b213b2 508 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 506 51.127 T 23-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 DLM_0175 8869ca1eaddf171932af2980c8b213b2 508 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 439 5.2E-174 T 23-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 DLM_0175 8869ca1eaddf171932af2980c8b213b2 508 SUPERFAMILY SSF56112 89 432 4.59E-44 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_0175 8869ca1eaddf171932af2980c8b213b2 508 Gene3D G3DSA:1.10.510.10 276 397 4.9E-6 T 23-10-2018 DLM_0175 8869ca1eaddf171932af2980c8b213b2 508 Pfam PF03109 ABC1 family 107 229 1.1E-32 T 23-10-2018 IPR004147 UbiB domain DLM_3890 12b004ed9b50c2eeaded9706886e532b 200 SUPERFAMILY SSF54631 38 152 1.1E-12 T 23-10-2018 DLM_3890 12b004ed9b50c2eeaded9706886e532b 200 Gene3D G3DSA:3.10.580.10 37 177 1.8E-13 T 23-10-2018 DLM_3890 12b004ed9b50c2eeaded9706886e532b 200 Pfam PF00571 CBS domain 39 92 1.1E-7 T 23-10-2018 IPR000644 CBS domain DLM_3890 12b004ed9b50c2eeaded9706886e532b 200 SMART SM00116 47 95 0.0053 T 23-10-2018 IPR000644 CBS domain DLM_4131 66242323b6db3170e34c8d9a5ac3b67c 528 Gene3D G3DSA:3.20.20.450 263 513 7.7E-81 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4131 66242323b6db3170e34c8d9a5ac3b67c 528 SUPERFAMILY SSF141868 266 508 4.05E-76 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4131 66242323b6db3170e34c8d9a5ac3b67c 528 Pfam PF00563 EAL domain 266 499 2.0E-64 T 23-10-2018 IPR001633 EAL domain DLM_4131 66242323b6db3170e34c8d9a5ac3b67c 528 SMART SM00052 260 504 9.5E-91 T 23-10-2018 IPR001633 EAL domain DLM_4131 66242323b6db3170e34c8d9a5ac3b67c 528 Pfam PF12792 CSS motif domain associated with EAL 44 224 3.4E-20 T 23-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DLM_4237 6e7e5df40a3cd29f051daaf795c16160 150 Pfam PF09980 Predicted membrane protein (DUF2214) 3 145 1.1E-9 T 23-10-2018 IPR018706 Protein of unknown function DUF2214, membrane DLM_4114 21008ece11caf6c82c2b72e9b9ae646b 970 Pfam PF06048 Domain of unknown function (DUF927) 385 659 4.3E-91 T 23-10-2018 IPR009270 Domain of unknown function DUF927 DLM_4114 21008ece11caf6c82c2b72e9b9ae646b 970 SUPERFAMILY SSF57783 17 98 7.31E-12 T 23-10-2018 DLM_4114 21008ece11caf6c82c2b72e9b9ae646b 970 Gene3D G3DSA:3.90.580.10 8 101 7.9E-10 T 23-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DLM_1189 69bbc126f5729c841c84fdc8ed80b153 305 SUPERFAMILY SSF53474 43 297 7.48E-36 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1189 69bbc126f5729c841c84fdc8ed80b153 305 Gene3D G3DSA:3.40.50.1820 25 292 2.8E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1189 69bbc126f5729c841c84fdc8ed80b153 305 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 81 97 - T 23-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 DLM_1189 69bbc126f5729c841c84fdc8ed80b153 305 Pfam PF07859 alpha/beta hydrolase fold 81 197 1.4E-17 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DLM_0553 0778ffc08ecc70c555de3826023d0320 289 SUPERFAMILY SSF51658 16 283 2.21E-56 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_0553 0778ffc08ecc70c555de3826023d0320 289 Gene3D G3DSA:3.20.20.150 16 285 2.9E-51 T 23-10-2018 DLM_0553 0778ffc08ecc70c555de3826023d0320 289 Pfam PF01261 Xylose isomerase-like TIM barrel 40 201 2.9E-14 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DLM_0553 0778ffc08ecc70c555de3826023d0320 289 PIRSF PIRSF036778 16 289 6.8E-119 T 23-10-2018 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type DLM_1563 c2289081c8f7baee3b6aa385c3b24df6 122 Pfam PF03466 LysR substrate binding domain 1 119 2.5E-21 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1563 c2289081c8f7baee3b6aa385c3b24df6 122 Gene3D G3DSA:3.40.190.10 1 38 8.2E-38 T 23-10-2018 DLM_1563 c2289081c8f7baee3b6aa385c3b24df6 122 SUPERFAMILY SSF53850 1 119 2.35E-21 T 23-10-2018 DLM_1563 c2289081c8f7baee3b6aa385c3b24df6 122 Gene3D G3DSA:3.40.190.10 39 119 8.2E-38 T 23-10-2018 DLM_1508 9786f888e1cda40a383eea1c01e4bd39 338 Pfam PF05544 Proline racemase 13 335 1.7E-98 T 23-10-2018 IPR008794 Proline racemase family DLM_1508 9786f888e1cda40a383eea1c01e4bd39 338 PIRSF PIRSF029792 5 338 5.9E-97 T 23-10-2018 IPR008794 Proline racemase family DLM_1508 9786f888e1cda40a383eea1c01e4bd39 338 Gene3D G3DSA:3.10.310.10 9 337 6.7E-116 T 23-10-2018 DLM_1508 9786f888e1cda40a383eea1c01e4bd39 338 SUPERFAMILY SSF54506 9 335 8.37E-88 T 23-10-2018 DLM_1508 9786f888e1cda40a383eea1c01e4bd39 338 Gene3D G3DSA:3.10.310.10 149 314 6.7E-116 T 23-10-2018 DLM_0065 d1f292fc8675dc69c7fe410c90faa59b 256 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 19 241 1.4E-31 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DLM_1887 acb6aa359cd31d047dbe6b3a9a640f4a 589 Pfam PF01935 Domain of unknown function DUF87 124 414 8.5E-36 T 23-10-2018 IPR002789 Helicase HerA, central domain DLM_1887 acb6aa359cd31d047dbe6b3a9a640f4a 589 Gene3D G3DSA:3.40.50.300 103 308 2.3E-18 T 23-10-2018 DLM_1887 acb6aa359cd31d047dbe6b3a9a640f4a 589 Gene3D G3DSA:3.40.50.300 369 566 1.4E-46 T 23-10-2018 DLM_1887 acb6aa359cd31d047dbe6b3a9a640f4a 589 SUPERFAMILY SSF52540 130 556 1.11E-33 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2921 ba8085a669a70574ddfdc08eafefd32b 249 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 149 186 - T 23-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DLM_2921 ba8085a669a70574ddfdc08eafefd32b 249 Gene3D G3DSA:1.10.150.20 12 89 1.6E-12 T 23-10-2018 DLM_2921 ba8085a669a70574ddfdc08eafefd32b 249 SUPERFAMILY SSF53927 98 246 8.03E-53 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DLM_2921 ba8085a669a70574ddfdc08eafefd32b 249 Pfam PF14437 MafB19-like deaminase 103 245 5.3E-29 T 23-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DLM_2921 ba8085a669a70574ddfdc08eafefd32b 249 Pfam PF04994 TfoX C-terminal domain 17 84 2.0E-13 T 23-10-2018 IPR007077 TfoX, C-terminal DLM_2921 ba8085a669a70574ddfdc08eafefd32b 249 Gene3D G3DSA:3.40.140.10 90 249 1.2E-58 T 23-10-2018 DLM_2921 ba8085a669a70574ddfdc08eafefd32b 249 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 104 245 45.197 T 23-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DLM_0965 84b54963663de10953c28b538a073859 141 Gene3D G3DSA:3.40.50.2300 1 135 1.6E-37 T 23-10-2018 DLM_0965 84b54963663de10953c28b538a073859 141 SUPERFAMILY SSF52788 1 131 9.16E-34 T 23-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DLM_0965 84b54963663de10953c28b538a073859 141 SMART SM00226 1 130 6.6E-18 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DLM_0965 84b54963663de10953c28b538a073859 141 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 127 2.6E-24 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DLM_0965 84b54963663de10953c28b538a073859 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 60 75 2.7E-10 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DLM_0965 84b54963663de10953c28b538a073859 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 26 42 2.7E-10 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DLM_0965 84b54963663de10953c28b538a073859 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 117 2.7E-10 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DLM_4061 a747d5dd38aa57687bc046b721ef7f7d 279 Pfam PF00756 Putative esterase 23 271 3.9E-64 T 23-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DLM_4061 a747d5dd38aa57687bc046b721ef7f7d 279 SUPERFAMILY SSF53474 3 277 2.98E-90 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4061 a747d5dd38aa57687bc046b721ef7f7d 279 Gene3D G3DSA:3.40.50.1820 3 279 3.4E-91 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4061 a747d5dd38aa57687bc046b721ef7f7d 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 4.4E-122 T 23-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 DLM_1153 b0a6d8f8d81a68966975fdcfe37b1226 149 SUPERFAMILY SSF52402 1 145 1.76E-36 T 23-10-2018 DLM_1153 b0a6d8f8d81a68966975fdcfe37b1226 149 Pfam PF00582 Universal stress protein family 1 145 1.1E-31 T 23-10-2018 IPR006016 UspA DLM_1153 b0a6d8f8d81a68966975fdcfe37b1226 149 PRINTS PR01438 Universal stress protein signature 2 20 4.8E-19 T 23-10-2018 IPR006015 Universal stress protein A DLM_1153 b0a6d8f8d81a68966975fdcfe37b1226 149 PRINTS PR01438 Universal stress protein signature 105 117 4.8E-19 T 23-10-2018 IPR006015 Universal stress protein A DLM_1153 b0a6d8f8d81a68966975fdcfe37b1226 149 PRINTS PR01438 Universal stress protein signature 123 145 4.8E-19 T 23-10-2018 IPR006015 Universal stress protein A DLM_1153 b0a6d8f8d81a68966975fdcfe37b1226 149 Gene3D G3DSA:3.40.50.620 1 145 2.0E-38 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1153 b0a6d8f8d81a68966975fdcfe37b1226 149 PIRSF PIRSF006276 1 147 4.6E-17 T 23-10-2018 IPR006015 Universal stress protein A DLM_1102 6fed43d57bc08b073be8e46a328a6366 202 SUPERFAMILY SSF53474 9 195 1.65E-41 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1102 6fed43d57bc08b073be8e46a328a6366 202 Pfam PF12146 Serine aminopeptidase, S33 27 136 6.4E-12 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 DLM_1102 6fed43d57bc08b073be8e46a328a6366 202 Gene3D G3DSA:3.40.50.1820 3 202 9.2E-50 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1928 45afe9c5f08087fdb81b04fed429f53d 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_1928 45afe9c5f08087fdb81b04fed429f53d 429 SUPERFAMILY SSF103473 18 426 1.57E-61 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1928 45afe9c5f08087fdb81b04fed429f53d 429 Pfam PF07690 Major Facilitator Superfamily 23 380 8.5E-26 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1928 45afe9c5f08087fdb81b04fed429f53d 429 Gene3D G3DSA:1.20.1250.20 16 428 1.0E-57 T 23-10-2018 DLM_2873 a9b3d056893f4172ef81c3fa23596aa8 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 445 1.4E-94 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain DLM_2873 a9b3d056893f4172ef81c3fa23596aa8 527 PIRSF PIRSF002741 17 526 5.6E-109 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DLM_2873 a9b3d056893f4172ef81c3fa23596aa8 527 SUPERFAMILY SSF53850 23 524 2.82E-144 T 23-10-2018 DLM_2873 a9b3d056893f4172ef81c3fa23596aa8 527 Gene3D G3DSA:3.10.105.10 284 502 1.1E-158 T 23-10-2018 DLM_2873 a9b3d056893f4172ef81c3fa23596aa8 527 Gene3D G3DSA:3.90.76.10 43 202 1.1E-158 T 23-10-2018 DLM_2873 a9b3d056893f4172ef81c3fa23596aa8 527 Gene3D G3DSA:3.40.190.10 203 515 1.1E-158 T 23-10-2018 DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 Pfam PF00005 ABC transporter 18 168 1.7E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 SMART SM00382 276 470 2.2E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 SMART SM00382 27 215 1.5E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 Pfam PF00005 ABC transporter 268 421 4.6E-21 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 Gene3D G3DSA:3.40.50.300 254 494 2.7E-42 T 23-10-2018 DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 Gene3D G3DSA:3.40.50.300 2 239 5.9E-56 T 23-10-2018 DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 SUPERFAMILY SSF52540 263 480 3.62E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4431 47d94bb30f20ff3d1ad69fd1cdc4bba0 496 SUPERFAMILY SSF52540 4 219 9.47E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3136 383f8d7fe12d4501e06a3206521596c1 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 258 3.6E-76 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_3136 383f8d7fe12d4501e06a3206521596c1 259 SUPERFAMILY SSF52096 3 258 1.81E-82 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_3136 383f8d7fe12d4501e06a3206521596c1 259 Gene3D G3DSA:3.90.226.10 2 200 3.9E-70 T 23-10-2018 DLM_3136 383f8d7fe12d4501e06a3206521596c1 259 Gene3D G3DSA:1.10.12.10 202 257 5.8E-22 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DLM_0721 19481ccba6d0461b9c3a8ebabe6bf679 142 Gene3D G3DSA:3.30.1490.190 85 139 3.8E-24 T 23-10-2018 DLM_0721 19481ccba6d0461b9c3a8ebabe6bf679 142 Pfam PF01475 Ferric uptake regulator family 11 129 3.1E-44 T 23-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DLM_0721 19481ccba6d0461b9c3a8ebabe6bf679 142 Gene3D G3DSA:1.10.10.10 1 83 3.5E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0721 19481ccba6d0461b9c3a8ebabe6bf679 142 SUPERFAMILY SSF46785 4 132 2.33E-42 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2839 3bc4803163e9dd353387cab8d944554b 161 SUPERFAMILY SSF141452 2 157 2.62E-42 T 23-10-2018 IPR036624 Hcp1-like superfamily DLM_2839 3bc4803163e9dd353387cab8d944554b 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.0E-36 T 23-10-2018 IPR008514 Type VI secretion system effector, Hcp DLM_2839 3bc4803163e9dd353387cab8d944554b 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 159 1.0E-49 T 23-10-2018 IPR008514 Type VI secretion system effector, Hcp DLM_2839 3bc4803163e9dd353387cab8d944554b 161 Gene3D G3DSA:2.30.110.20 1 161 1.6E-72 T 23-10-2018 IPR036624 Hcp1-like superfamily DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 311 317 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 Pfam PF12161 HsdM N-terminal domain 9 148 6.1E-22 T 23-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 8.7E-10 T 23-10-2018 DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 308 320 8.7E-10 T 23-10-2018 DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 217 231 8.7E-10 T 23-10-2018 DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 SUPERFAMILY SSF53335 7 551 4.87E-107 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 Gene3D G3DSA:3.40.50.150 164 503 9.9E-86 T 23-10-2018 DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 Pfam PF02384 N-6 DNA Methylase 165 491 2.6E-48 T 23-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DLM_3405 09c7e6d11c5ce06a651fd1b369e5f500 746 Gene3D G3DSA:1.20.1260.30 1 90 2.0E-6 T 23-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily DLM_0443 74ae93875816122192111199a2929bee 497 Pfam PF02541 Ppx/GppA phosphatase family 25 307 3.7E-71 T 23-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DLM_0443 74ae93875816122192111199a2929bee 497 Gene3D G3DSA:1.10.3210.10 309 497 2.2E-54 T 23-10-2018 DLM_0443 74ae93875816122192111199a2929bee 497 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 305 2.9E-94 T 23-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 DLM_0443 74ae93875816122192111199a2929bee 497 Gene3D G3DSA:3.30.420.40 12 302 6.7E-83 T 23-10-2018 DLM_0443 74ae93875816122192111199a2929bee 497 Gene3D G3DSA:3.30.420.150 115 294 6.7E-83 T 23-10-2018 DLM_0443 74ae93875816122192111199a2929bee 497 SUPERFAMILY SSF53067 11 132 4.64E-34 T 23-10-2018 DLM_0443 74ae93875816122192111199a2929bee 497 SUPERFAMILY SSF109604 312 495 1.73E-43 T 23-10-2018 DLM_0443 74ae93875816122192111199a2929bee 497 SUPERFAMILY SSF53067 136 308 2.87E-43 T 23-10-2018 DLM_0443 74ae93875816122192111199a2929bee 497 PIRSF PIRSF001267 1 497 4.2E-191 T 23-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 DLM_3363 17980bbb10da71f5528c42bb0ad3290d 148 Pfam PF04386 Stringent starvation protein B 6 148 1.2E-32 T 23-10-2018 IPR007481 Stringent starvation protein B DLM_3363 17980bbb10da71f5528c42bb0ad3290d 148 SUPERFAMILY SSF101738 3 108 5.89E-45 T 23-10-2018 IPR036760 SspB-like superfamily DLM_3363 17980bbb10da71f5528c42bb0ad3290d 148 Gene3D G3DSA:2.30.30.220 2 126 8.1E-46 T 23-10-2018 IPR036760 SspB-like superfamily DLM_3363 17980bbb10da71f5528c42bb0ad3290d 148 PIRSF PIRSF005276 1 148 3.8E-52 T 23-10-2018 IPR007481 Stringent starvation protein B DLM_0478 4bdfd1078f5a040cf402629fc350337a 358 Pfam PF00419 Fimbrial protein 213 358 9.3E-18 T 23-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 DLM_0478 4bdfd1078f5a040cf402629fc350337a 358 SUPERFAMILY SSF49401 216 358 1.29E-21 T 23-10-2018 IPR008966 Adhesion domain superfamily DLM_0478 4bdfd1078f5a040cf402629fc350337a 358 Gene3D G3DSA:2.60.40.1090 212 357 8.0E-25 T 23-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 DLM_1851 13a8f906d3dd545d2b14c8c52f46a6e2 193 Pfam PF01613 Flavin reductase like domain 18 151 8.0E-23 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DLM_1851 13a8f906d3dd545d2b14c8c52f46a6e2 193 SMART SM00903 14 160 3.6E-32 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DLM_1851 13a8f906d3dd545d2b14c8c52f46a6e2 193 Gene3D G3DSA:2.30.110.10 1 187 5.7E-59 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DLM_1851 13a8f906d3dd545d2b14c8c52f46a6e2 193 SUPERFAMILY SSF50475 6 185 5.4E-46 T 23-10-2018 DLM_4215 f2bb96957487db88faf5400c2da70c2e 304 SUPERFAMILY SSF161098 102 284 3.79E-27 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4215 f2bb96957487db88faf5400c2da70c2e 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 72 4.3E-15 T 23-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DLM_4215 f2bb96957487db88faf5400c2da70c2e 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 302 4.7E-26 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4215 f2bb96957487db88faf5400c2da70c2e 304 Gene3D G3DSA:1.10.3720.10 102 300 2.0E-18 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4247 95d4d66c9a6cd6123e9a5fbab8f5de61 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 9 270 1.6E-91 T 23-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DLM_4247 95d4d66c9a6cd6123e9a5fbab8f5de61 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 268 1.7E-24 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4247 95d4d66c9a6cd6123e9a5fbab8f5de61 279 SUPERFAMILY SSF161098 16 268 1.19E-56 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4247 95d4d66c9a6cd6123e9a5fbab8f5de61 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 11 274 5.8E-123 T 23-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 DLM_4247 95d4d66c9a6cd6123e9a5fbab8f5de61 279 Gene3D G3DSA:1.10.3720.10 15 275 1.2E-67 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2717 756baa680d1abb3382112b3e708ceb2c 307 Pfam PF05661 Protein of unknown function (DUF808) 4 296 4.2E-112 T 23-10-2018 IPR008526 Inner membrane protein YedI DLM_2717 756baa680d1abb3382112b3e708ceb2c 307 PIRSF PIRSF016660 1 307 4.0E-119 T 23-10-2018 IPR008526 Inner membrane protein YedI DLM_2450 71a7b11654c4d98095929ba185863db4 309 SUPERFAMILY SSF53067 5 90 9.71E-24 T 23-10-2018 DLM_2450 71a7b11654c4d98095929ba185863db4 309 Pfam PF00814 Glycoprotease family 3 280 2.4E-101 T 23-10-2018 IPR000905 Gcp-like domain DLM_2450 71a7b11654c4d98095929ba185863db4 309 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 303 56.989 T 23-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DLM_2450 71a7b11654c4d98095929ba185863db4 309 Gene3D G3DSA:3.30.420.40 2 287 6.9E-115 T 23-10-2018 DLM_2450 71a7b11654c4d98095929ba185863db4 309 Gene3D G3DSA:3.30.420.40 97 266 6.9E-115 T 23-10-2018 DLM_2450 71a7b11654c4d98095929ba185863db4 309 SUPERFAMILY SSF53067 70 282 2.12E-46 T 23-10-2018 DLM_2450 71a7b11654c4d98095929ba185863db4 309 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 122 143 1.3E-43 T 23-10-2018 IPR017861 Kae1/TsaD family DLM_2450 71a7b11654c4d98095929ba185863db4 309 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 44 64 1.3E-43 T 23-10-2018 IPR017861 Kae1/TsaD family DLM_2450 71a7b11654c4d98095929ba185863db4 309 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 99 111 1.3E-43 T 23-10-2018 IPR017861 Kae1/TsaD family DLM_2450 71a7b11654c4d98095929ba185863db4 309 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 236 245 1.3E-43 T 23-10-2018 IPR017861 Kae1/TsaD family DLM_2450 71a7b11654c4d98095929ba185863db4 309 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 65 84 1.3E-43 T 23-10-2018 IPR017861 Kae1/TsaD family DLM_2450 71a7b11654c4d98095929ba185863db4 309 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 3 279 1.5E-105 T 23-10-2018 IPR017861 Kae1/TsaD family DLM_2450 71a7b11654c4d98095929ba185863db4 309 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 2 286 3.2E-122 T 23-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DLM_4207 2513bfc92081334f320f5ad38466c820 304 SUPERFAMILY SSF103481 202 291 4.18E-16 T 23-10-2018 DLM_4207 2513bfc92081334f320f5ad38466c820 304 Pfam PF00892 EamA-like transporter family 17 147 1.7E-19 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_4207 2513bfc92081334f320f5ad38466c820 304 Pfam PF00892 EamA-like transporter family 156 289 3.4E-24 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_4207 2513bfc92081334f320f5ad38466c820 304 SUPERFAMILY SSF103481 49 147 1.96E-16 T 23-10-2018 DLM_2989 02cab7f47e9778e1efc9392ce011955c 211 Gene3D G3DSA:3.20.20.70 3 211 2.5E-70 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2989 02cab7f47e9778e1efc9392ce011955c 211 SUPERFAMILY SSF102114 47 140 6.93E-8 T 23-10-2018 DLM_2989 02cab7f47e9778e1efc9392ce011955c 211 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 211 34.04 T 23-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DLM_2989 02cab7f47e9778e1efc9392ce011955c 211 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 4 211 2.6E-110 T 23-10-2018 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DLM_2989 02cab7f47e9778e1efc9392ce011955c 211 Pfam PF13394 4Fe-4S single cluster domain 26 123 1.1E-4 T 23-10-2018 DLM_2989 02cab7f47e9778e1efc9392ce011955c 211 PIRSF PIRSF000370 2 211 7.6E-36 T 23-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DLM_4488 26bc4300a3b48728670af73e44a1c847 261 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 10 261 1.8E-85 T 23-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DLM_4488 26bc4300a3b48728670af73e44a1c847 261 Pfam PF02405 Permease MlaE 48 258 1.5E-76 T 23-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 Gene3D G3DSA:1.20.58.180 189 270 6.7E-32 T 23-10-2018 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 SUPERFAMILY SSF55681 1 264 1.62E-123 T 23-10-2018 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 1 263 2.8E-138 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 265 54.34 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 Gene3D G3DSA:3.30.930.10 1 188 3.9E-99 T 23-10-2018 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 75 3.1E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 135 150 3.1E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 225 241 3.1E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 34 49 3.1E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 132 3.1E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 86 110 3.1E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_3008 d54ad93b7a30c5de5faa1b737ad18cbf 274 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 272 2.6E-150 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DLM_0011 7f550e42ec4ccdfaa40eb2e38d1410d3 98 Pfam PF06906 Protein of unknown function (DUF1272) 1 56 3.6E-24 T 23-10-2018 IPR010696 Protein of unknown function DUF1272 DLM_4213 9769bea38acf1080f44869a21954d52f 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 456 2.8E-76 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain DLM_4213 9769bea38acf1080f44869a21954d52f 537 Gene3D G3DSA:3.90.76.10 70 192 3.1E-165 T 23-10-2018 DLM_4213 9769bea38acf1080f44869a21954d52f 537 PIRSF PIRSF002741 2 537 5.7E-101 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DLM_4213 9769bea38acf1080f44869a21954d52f 537 SUPERFAMILY SSF53850 34 534 4.89E-129 T 23-10-2018 DLM_4213 9769bea38acf1080f44869a21954d52f 537 Gene3D G3DSA:3.40.190.10 40 519 3.1E-165 T 23-10-2018 DLM_4213 9769bea38acf1080f44869a21954d52f 537 Gene3D G3DSA:3.10.105.10 294 507 3.1E-165 T 23-10-2018 DLM_1289 239d8914b3b27114d0a645de0ba45e39 688 Gene3D G3DSA:3.30.420.10 251 493 1.1E-59 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1289 239d8914b3b27114d0a645de0ba45e39 688 Pfam PF00665 Integrase core domain 265 384 5.1E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_1289 239d8914b3b27114d0a645de0ba45e39 688 Gene3D G3DSA:2.30.30.130 502 556 1.3E-5 T 23-10-2018 IPR009004 Transposase, Mu, C-terminal DLM_1289 239d8914b3b27114d0a645de0ba45e39 688 ProDom PD223702 DNA TRANSPOSASE DNA-BINDING TRANSPOSABLE INTEGRATION ELEMENT RECOMBINATION TRANSPOSASE EXCISION TRANSPOSITION 270 453 0.001 T 23-10-2018 DLM_1289 239d8914b3b27114d0a645de0ba45e39 688 SUPERFAMILY SSF53098 263 484 6.83E-56 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1289 239d8914b3b27114d0a645de0ba45e39 688 SUPERFAMILY SSF50610 481 558 3.4E-21 T 23-10-2018 IPR009004 Transposase, Mu, C-terminal DLM_1289 239d8914b3b27114d0a645de0ba45e39 688 SUPERFAMILY SSF46955 5 56 8.7E-5 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_1289 239d8914b3b27114d0a645de0ba45e39 688 Pfam PF09299 Mu transposase, C-terminal 496 553 2.7E-18 T 23-10-2018 IPR015378 Transposase-like, Mu, C-terminal DLM_0425 50d20e72eff5560e47dccbd4d2e3a5b7 465 Gene3D G3DSA:1.20.1720.10 62 440 4.4E-66 T 23-10-2018 DLM_0425 50d20e72eff5560e47dccbd4d2e3a5b7 465 SUPERFAMILY SSF103473 61 446 5.23E-54 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0425 50d20e72eff5560e47dccbd4d2e3a5b7 465 Pfam PF07690 Major Facilitator Superfamily 68 345 8.4E-29 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_0425 50d20e72eff5560e47dccbd4d2e3a5b7 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 115 131 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_3718 1d3bd5aab046d59f1d75a0e60fb7bae5 166 SUPERFAMILY SSF52833 59 160 1.07E-5 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_1006 4a99bd63b83ab9daaf29e163585ffbab 260 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 29 252 6.6E-81 T 23-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 DLM_1006 4a99bd63b83ab9daaf29e163585ffbab 260 PIRSF PIRSF001273 3 256 2.3E-76 T 23-10-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 DLM_1006 4a99bd63b83ab9daaf29e163585ffbab 260 Gene3D G3DSA:3.30.428.30 22 254 1.9E-79 T 23-10-2018 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily KEGG: 00564+3.6.1.26 DLM_1006 4a99bd63b83ab9daaf29e163585ffbab 260 SUPERFAMILY SSF54197 29 252 2.55E-71 T 23-10-2018 IPR036265 HIT-like superfamily DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 Gene3D G3DSA:3.30.390.30 357 477 3.9E-43 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 476 5.5E-158 T 23-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 339 2.2E-68 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 SUPERFAMILY SSF55424 354 476 1.29E-38 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 Gene3D G3DSA:3.50.50.60 166 288 5.4E-108 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.9E-43 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 187 205 3.9E-43 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 291 3.9E-43 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 304 326 3.9E-43 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.9E-43 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PIRSF PIRSF000350 1 474 1.0E-74 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 Gene3D G3DSA:3.50.50.60 5 346 5.4E-108 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 SUPERFAMILY SSF51905 1 349 4.09E-59 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 23-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 358 467 1.4E-34 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 354 375 2.7E-78 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 441 461 2.7E-78 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.7E-78 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 290 2.7E-78 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 160 2.7E-78 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 2.7E-78 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 326 2.7E-78 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 187 212 2.7E-78 T 23-10-2018 DLM_0358 00e45505fbec2da87528dd5a1c83d195 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 419 434 2.7E-78 T 23-10-2018 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 Pfam PF00158 Sigma-54 interaction domain 137 303 4.2E-68 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 5 473 3.3E-207 T 23-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 Pfam PF02954 Bacterial regulatory protein, Fis family 435 473 8.1E-11 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 Gene3D G3DSA:3.40.50.2300 2 122 5.1E-36 T 23-10-2018 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 Gene3D G3DSA:1.10.10.60 382 476 6.1E-18 T 23-10-2018 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 SMART SM00448 3 114 8.5E-30 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 Gene3D G3DSA:1.10.8.60 308 381 4.4E-20 T 23-10-2018 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 SUPERFAMILY SSF52540 138 380 1.43E-70 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 SMART SM00382 157 300 2.7E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 Pfam PF00072 Response regulator receiver domain 5 114 1.0E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 Gene3D G3DSA:3.40.50.300 127 307 1.6E-62 T 23-10-2018 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 SUPERFAMILY SSF52172 5 182 1.71E-39 T 23-10-2018 IPR011006 CheY-like superfamily DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 SUPERFAMILY SSF46689 397 476 1.79E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 456 3.3E-7 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_3084 8cdb088f4254390b9ac171af7e86dfd0 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 476 3.3E-7 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 Pfam PF09179 TilS substrate binding domain 248 314 1.4E-11 T 23-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 Gene3D G3DSA:1.20.59.20 234 317 4.0E-9 T 23-10-2018 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 SMART SM00977 364 433 3.8E-13 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 SUPERFAMILY SSF56037 338 428 7.85E-17 T 23-10-2018 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 Pfam PF11734 TilS substrate C-terminal domain 369 422 4.7E-12 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 Gene3D G3DSA:3.40.50.620 21 233 1.4E-64 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 366 408 8.7E-12 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 17 306 22.419 T 23-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 SUPERFAMILY SSF82829 243 316 8.89E-12 T 23-10-2018 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 25 203 8.9E-48 T 23-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 SUPERFAMILY SSF52402 24 232 5.12E-53 T 23-10-2018 DLM_1087 02009a6804e4a3abefbcd84d1fb786db 437 Pfam PF01171 PP-loop family 25 199 3.8E-53 T 23-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DLM_3573 7cf36d13e27a91729eb923c2e3bcff07 181 PIRSF PIRSF017018 1 181 1.5E-84 T 23-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type DLM_3573 7cf36d13e27a91729eb923c2e3bcff07 181 Pfam PF10634 Fe2+ transport protein 23 174 9.3E-70 T 23-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type DLM_3573 7cf36d13e27a91729eb923c2e3bcff07 181 Gene3D G3DSA:2.60.40.2480 21 181 2.4E-71 T 23-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily DLM_2339 d98d2c47b55968f3a0a8d8b9dfc3fbeb 337 Gene3D G3DSA:1.10.645.10 185 330 1.0E-10 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2339 d98d2c47b55968f3a0a8d8b9dfc3fbeb 337 SUPERFAMILY SSF56762 23 330 8.5E-23 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3095 52797985d621813d1fafb3a859a9b83b 293 SUPERFAMILY SSF103481 209 290 6.54E-14 T 23-10-2018 DLM_3095 52797985d621813d1fafb3a859a9b83b 293 Pfam PF00892 EamA-like transporter family 161 287 2.0E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3095 52797985d621813d1fafb3a859a9b83b 293 Pfam PF00892 EamA-like transporter family 16 149 3.2E-17 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3095 52797985d621813d1fafb3a859a9b83b 293 SUPERFAMILY SSF103481 50 154 2.22E-15 T 23-10-2018 DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 Pfam PF12848 ABC transporter 230 306 1.5E-11 T 23-10-2018 IPR032781 ABC-transporter extension domain DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 SUPERFAMILY SSF52540 303 514 2.71E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 SUPERFAMILY SSF52540 6 236 3.16E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 SMART SM00382 31 236 3.4E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 SMART SM00382 348 524 2.3E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 Pfam PF00005 ABC transporter 340 473 9.9E-26 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 Pfam PF00005 ABC transporter 23 191 3.0E-27 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 Gene3D G3DSA:3.40.50.300 286 554 1.2E-74 T 23-10-2018 DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 3.9E-289 T 23-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 DLM_0229 ce25b24468e5e01a53206633d3596cc3 555 Gene3D G3DSA:3.40.50.300 1 285 7.4E-81 T 23-10-2018 DLM_1926 9140f024fb6937c984d3906bd7e8375c 367 SUPERFAMILY SSF53850 9 239 1.45E-20 T 23-10-2018 DLM_1926 9140f024fb6937c984d3906bd7e8375c 367 Gene3D G3DSA:3.40.190.10 10 349 5.8E-102 T 23-10-2018 DLM_1926 9140f024fb6937c984d3906bd7e8375c 367 Pfam PF13379 NMT1-like family 5 251 4.2E-79 T 23-10-2018 DLM_1926 9140f024fb6937c984d3906bd7e8375c 367 Gene3D G3DSA:3.40.190.10 96 203 5.8E-102 T 23-10-2018 DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 SUPERFAMILY SSF51735 5 245 5.63E-84 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 2.1E-4 T 23-10-2018 DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 Gene3D G3DSA:3.40.50.720 1 245 7.6E-84 T 23-10-2018 DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 6.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1871 34641e55f273db4ec0c7f2cf8ae82656 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 245 1.3E-64 T 23-10-2018 DLM_4472 7dc64d09458dc20529aaccdd3753ebce 210 Gene3D G3DSA:3.40.50.1000 77 209 2.6E-22 T 23-10-2018 IPR023214 HAD superfamily DLM_4472 7dc64d09458dc20529aaccdd3753ebce 210 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 5.9E-11 T 23-10-2018 DLM_4472 7dc64d09458dc20529aaccdd3753ebce 210 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 5 184 3.5E-49 T 23-10-2018 IPR010237 Pyrimidine 5-nucleotidase DLM_4472 7dc64d09458dc20529aaccdd3753ebce 210 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 185 1.1E-15 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_4472 7dc64d09458dc20529aaccdd3753ebce 210 SUPERFAMILY SSF56784 5 205 8.87E-33 T 23-10-2018 IPR036412 HAD-like superfamily DLM_4472 7dc64d09458dc20529aaccdd3753ebce 210 Gene3D G3DSA:1.10.150.450 8 76 7.2E-11 T 23-10-2018 DLM_0536 803df0681c868efa5d10d56a55411450 96 Pfam PF05532 CsbD-like 34 84 9.9E-16 T 23-10-2018 IPR008462 CsbD-like domain DLM_0536 803df0681c868efa5d10d56a55411450 96 Gene3D G3DSA:1.10.1470.10 31 93 1.4E-22 T 23-10-2018 IPR036629 YjbJ superfamily DLM_0536 803df0681c868efa5d10d56a55411450 96 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 46 92 3.6E-5 T 23-10-2018 IPR008792 Coenzyme PQQ synthesis D DLM_0536 803df0681c868efa5d10d56a55411450 96 PIRSF PIRSF039008 31 95 2.1E-22 T 23-10-2018 IPR026042 Stress response protein YjbJ DLM_0536 803df0681c868efa5d10d56a55411450 96 SUPERFAMILY SSF69047 32 95 1.06E-20 T 23-10-2018 IPR036629 YjbJ superfamily DLM_2022 0cb45b75ca668b0da805c66d2e926313 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 237 3.6E-15 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2022 0cb45b75ca668b0da805c66d2e926313 254 SMART SM00062 18 239 0.0012 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2022 0cb45b75ca668b0da805c66d2e926313 254 Gene3D G3DSA:3.40.190.10 24 235 6.2E-22 T 23-10-2018 DLM_2022 0cb45b75ca668b0da805c66d2e926313 254 SUPERFAMILY SSF53850 19 240 3.58E-28 T 23-10-2018 DLM_2022 0cb45b75ca668b0da805c66d2e926313 254 Gene3D G3DSA:3.40.190.10 101 196 6.2E-22 T 23-10-2018 DLM_0878 b6743e9dc13d12da67b2764bdcfc7695 543 PIRSF PIRSF007056 16 535 3.3E-236 T 23-10-2018 IPR012036 Bacteriophage Mu, Gp28 DLM_0878 b6743e9dc13d12da67b2764bdcfc7695 543 Gene3D G3DSA:3.40.50.300 42 230 4.2E-30 T 23-10-2018 DLM_3853 d1487d19cd17911ea19acfb9416c4597 165 Pfam PF01863 Protein of unknown function DUF45 93 149 4.2E-12 T 23-10-2018 IPR002725 Protein of unknown function DUF45 DLM_3853 d1487d19cd17911ea19acfb9416c4597 165 Gene3D G3DSA:3.30.2010.10 77 163 6.4E-7 T 23-10-2018 DLM_3941 2d45c52fc1c7b3f46990af3db04e9f02 151 Gene3D G3DSA:3.40.630.30 6 135 6.4E-39 T 23-10-2018 DLM_3941 2d45c52fc1c7b3f46990af3db04e9f02 151 SUPERFAMILY SSF55729 21 132 1.86E-21 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3941 2d45c52fc1c7b3f46990af3db04e9f02 151 Pfam PF13508 Acetyltransferase (GNAT) domain 52 125 2.7E-12 T 23-10-2018 IPR000182 GNAT domain DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 Gene3D G3DSA:3.40.50.720 1 231 9.9E-59 T 23-10-2018 DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 68 7.9E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 148 7.9E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 209 7.9E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 103 119 7.9E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 167 7.9E-29 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 2 225 3.3E-53 T 23-10-2018 DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 SUPERFAMILY SSF51735 2 227 2.43E-57 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 116 144 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 148 3.8E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 57 68 3.8E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_2784 2c0446340da8c42d4efafe1ca1bc0925 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 109 117 3.8E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0688 d2052ffc1429ece129a6ca8cc784228c 284 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 13 283 9.9E-114 T 23-10-2018 IPR021266 Kdo hydroxylase DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 36.592 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 SUPERFAMILY SSF103263 4 352 6.02E-147 T 23-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.7E-143 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 Pfam PF01264 Chorismate synthase 10 345 3.6E-139 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 Gene3D G3DSA:3.60.150.10 1 362 5.6E-153 T 23-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 PIRSF PIRSF001456 3 361 1.1E-136 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_0387 8a6fe4386568eed362db559d0eb485ef 366 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DLM_2192 d01af98bfff8fdbb7de620a340f7480c 222 Gene3D G3DSA:3.40.50.150 40 215 1.3E-27 T 23-10-2018 DLM_2192 d01af98bfff8fdbb7de620a340f7480c 222 Pfam PF10294 Lysine methyltransferase 52 171 7.0E-10 T 23-10-2018 IPR019410 Lysine methyltransferase DLM_2192 d01af98bfff8fdbb7de620a340f7480c 222 SUPERFAMILY SSF53335 52 190 8.83E-17 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2327 9d4c39917e31f667256244489bc0561f 877 Pfam PF13332 Haemagluttinin repeat 31 161 9.7E-33 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_2327 9d4c39917e31f667256244489bc0561f 877 Pfam PF04829 Pre-toxin domain with VENN motif 486 535 6.9E-18 T 23-10-2018 IPR006914 VENN motif-containing domain DLM_1921 8efef0634cc108c8d65dcdd6ee316a27 253 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 11 25 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_1921 8efef0634cc108c8d65dcdd6ee316a27 253 Gene3D G3DSA:3.30.950.10 121 238 5.9E-35 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DLM_1921 8efef0634cc108c8d65dcdd6ee316a27 253 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 6 236 1.4E-78 T 23-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DLM_1921 8efef0634cc108c8d65dcdd6ee316a27 253 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 214 1.0E-42 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DLM_1921 8efef0634cc108c8d65dcdd6ee316a27 253 Gene3D G3DSA:3.40.1010.10 4 120 2.0E-35 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DLM_1921 8efef0634cc108c8d65dcdd6ee316a27 253 SUPERFAMILY SSF53790 3 235 3.93E-63 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DLM_3714 1be2aa0642ae3c92eed83e92f76c8157 254 Pfam PF07317 Flagellar regulator YcgR 22 127 5.9E-28 T 23-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DLM_3714 1be2aa0642ae3c92eed83e92f76c8157 254 Pfam PF07238 PilZ domain 130 242 3.2E-12 T 23-10-2018 IPR009875 PilZ domain GO:0035438 DLM_3714 1be2aa0642ae3c92eed83e92f76c8157 254 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 17 253 30.794 T 23-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 DLM_3714 1be2aa0642ae3c92eed83e92f76c8157 254 Gene3D G3DSA:2.40.10.220 131 248 1.6E-27 T 23-10-2018 DLM_3714 1be2aa0642ae3c92eed83e92f76c8157 254 Gene3D G3DSA:2.30.110.10 20 130 5.2E-7 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DLM_3714 1be2aa0642ae3c92eed83e92f76c8157 254 SUPERFAMILY SSF141371 131 242 5.49E-5 T 23-10-2018 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 505 1.2E-133 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 281 335 - T 23-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 279 300 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 199 217 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 462 483 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 340 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 402 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 125 149 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 349 370 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 167 179 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 98 121 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 412 431 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 48 73 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 PRINTS PR01165 Cytochrome c oxidase subunit I signature 228 247 5.3E-93 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 SUPERFAMILY SSF81442 44 560 1.57E-175 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 3 648 0.0 T 23-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 DLM_0028 21ac34d54d6a26dfff6443188f167953 680 Gene3D G3DSA:1.20.210.10 31 564 1.9E-186 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_4017 f0f5d229c8cbae064d5a0aeda1768fd2 223 SUPERFAMILY SSF161098 13 207 3.4E-39 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4017 f0f5d229c8cbae064d5a0aeda1768fd2 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 116 1.1E-21 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_4017 f0f5d229c8cbae064d5a0aeda1768fd2 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 221 7.8E-18 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4017 f0f5d229c8cbae064d5a0aeda1768fd2 223 Gene3D G3DSA:1.10.3720.10 1 222 1.0E-44 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1901 342bb4f135c12e3db356f98a2b97e6ec 154 Pfam PF00691 OmpA family 69 142 1.7E-8 T 23-10-2018 IPR006665 OmpA-like domain DLM_1901 342bb4f135c12e3db356f98a2b97e6ec 154 Gene3D G3DSA:3.30.1330.60 23 146 1.7E-6 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_1901 342bb4f135c12e3db356f98a2b97e6ec 154 SUPERFAMILY SSF103088 65 138 4.45E-7 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_1766 812aa3bd023667b068ed693bc78f300f 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.8E-18 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1766 812aa3bd023667b068ed693bc78f300f 215 Gene3D G3DSA:1.10.357.10 2 210 1.8E-50 T 23-10-2018 DLM_1766 812aa3bd023667b068ed693bc78f300f 215 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 89 199 2.3E-16 T 23-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 DLM_1766 812aa3bd023667b068ed693bc78f300f 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.7E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1766 812aa3bd023667b068ed693bc78f300f 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.7E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_1766 812aa3bd023667b068ed693bc78f300f 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DLM_1766 812aa3bd023667b068ed693bc78f300f 215 SUPERFAMILY SSF46689 2 83 2.62E-20 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1766 812aa3bd023667b068ed693bc78f300f 215 SUPERFAMILY SSF48498 87 205 4.45E-9 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 Pfam PF01966 HD domain 226 326 1.5E-7 T 23-10-2018 IPR006674 HD domain DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 Pfam PF01743 Poly A polymerase head domain 3 122 2.9E-19 T 23-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 146 209 5.0E-13 T 23-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 SUPERFAMILY SSF81301 1 118 1.42E-30 T 23-10-2018 DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 SUPERFAMILY SSF81891 120 357 1.83E-54 T 23-10-2018 DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 Gene3D G3DSA:1.10.3090.10 123 371 3.9E-42 T 23-10-2018 DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 Hamap MF_01262 CCA-adding enzyme [cca]. 1 398 41.159 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 404 52.193 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 Gene3D G3DSA:3.30.460.10 1 122 8.7E-30 T 23-10-2018 DLM_1135 e5b1cc983f390287c10d2ce977c0db63 409 PIRSF PIRSF000813 1 405 2.1E-191 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DLM_3165 a963ad4f90c8af6a5e8d38e6c59723aa 265 Pfam PF12706 Beta-lactamase superfamily domain 55 232 1.3E-37 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3165 a963ad4f90c8af6a5e8d38e6c59723aa 265 Gene3D G3DSA:3.60.15.10 6 260 6.0E-75 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3165 a963ad4f90c8af6a5e8d38e6c59723aa 265 SMART SM00849 42 209 0.0033 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_3165 a963ad4f90c8af6a5e8d38e6c59723aa 265 SUPERFAMILY SSF56281 9 260 4.19E-48 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 1.4E-8 T 23-10-2018 DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 1.4E-8 T 23-10-2018 DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 1.4E-8 T 23-10-2018 DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 Pfam PF13488 Glycine zipper 37 83 1.1E-8 T 23-10-2018 IPR039567 Glycine zipper domain DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 SUPERFAMILY SSF103088 103 216 1.02E-38 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 PRINTS PR01021 OMPA domain signature 161 177 3.1E-12 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 PRINTS PR01021 OMPA domain signature 146 161 3.1E-12 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 PRINTS PR01021 OMPA domain signature 116 138 3.1E-12 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 Gene3D G3DSA:3.30.1330.60 78 219 6.8E-45 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_2961 2108727e87cdbda36f7beb063bafb61c 221 Pfam PF00691 OmpA family 116 210 1.3E-20 T 23-10-2018 IPR006665 OmpA-like domain DLM_3706 ccbab88812cf13f338e8dbbec2e473ae 255 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 254 49.162 T 23-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DLM_3706 ccbab88812cf13f338e8dbbec2e473ae 255 Pfam PF00977 Histidine biosynthesis protein 6 238 4.3E-92 T 23-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DLM_3706 ccbab88812cf13f338e8dbbec2e473ae 255 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 254 4.4E-114 T 23-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DLM_3706 ccbab88812cf13f338e8dbbec2e473ae 255 Gene3D G3DSA:3.20.20.70 1 255 1.4E-112 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3706 ccbab88812cf13f338e8dbbec2e473ae 255 SUPERFAMILY SSF51366 3 254 3.85E-85 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DLM_2489 882c34f70464254c7c16d61ab9f6a57d 258 Pfam PF01925 Sulfite exporter TauE/SafE 10 246 7.1E-38 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DLM_3111 57cea6542d0d5abc6446fc1e9478680a 170 Pfam PF00583 Acetyltransferase (GNAT) family 33 137 8.2E-17 T 23-10-2018 IPR000182 GNAT domain DLM_3111 57cea6542d0d5abc6446fc1e9478680a 170 Gene3D G3DSA:3.40.630.30 2 163 1.0E-41 T 23-10-2018 DLM_3111 57cea6542d0d5abc6446fc1e9478680a 170 SUPERFAMILY SSF55729 1 164 7.85E-36 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 Gene3D G3DSA:2.30.30.100 272 322 3.2E-12 T 23-10-2018 DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 SUPERFAMILY SSF50037 277 319 3.57E-7 T 23-10-2018 IPR008988 Transcriptional repressor, C-terminal DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 212 8.9E-14 T 23-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 86 319 8.5E-56 T 23-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 Pfam PF08279 HTH domain 6 58 2.2E-9 T 23-10-2018 IPR013196 Helix-turn-helix, type 11 DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 Gene3D G3DSA:1.10.10.10 2 63 2.0E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 SUPERFAMILY SSF55681 82 268 7.81E-54 T 23-10-2018 DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 SUPERFAMILY SSF46785 3 60 3.3E-7 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 Gene3D G3DSA:3.30.930.10 72 270 7.7E-61 T 23-10-2018 DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 Pfam PF02237 Biotin protein ligase C terminal domain 275 319 1.1E-8 T 23-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DLM_3814 9291592c3f2dd33f3ae79c45e1835de8 322 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 5 319 30.58 T 23-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 DLM_1154 6754369c0538ad006ffdf13a34ba2223 107 SUPERFAMILY SSF47413 11 63 8.96E-8 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_1154 6754369c0538ad006ffdf13a34ba2223 107 Gene3D G3DSA:1.10.260.40 6 88 4.3E-11 T 23-10-2018 DLM_2363 b1216142e46ad7064b872801c0c57e4a 181 Pfam PF09361 Phasin protein 7 104 9.1E-21 T 23-10-2018 IPR018968 Phasin DLM_2363 b1216142e46ad7064b872801c0c57e4a 181 TIGRFAM TIGR01841 phasin: phasin family protein 28 103 9.5E-17 T 23-10-2018 IPR010127 Phasin, subfamily 1 DLM_3354 d6d390879b47a7ca56fde7978ac959d6 376 SUPERFAMILY SSF51182 24 373 2.86E-88 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_3354 d6d390879b47a7ca56fde7978ac959d6 376 Gene3D G3DSA:2.60.120.10 228 352 2.4E-6 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_3354 d6d390879b47a7ca56fde7978ac959d6 376 Gene3D G3DSA:2.60.120.10 63 164 1.2E-9 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_3354 d6d390879b47a7ca56fde7978ac959d6 376 Pfam PF04209 homogentisate 1,2-dioxygenase 90 355 5.9E-20 T 23-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 DLM_3744 7215c744f846427c405e79e155ac6411 176 Gene3D G3DSA:1.20.120.520 5 174 1.4E-43 T 23-10-2018 DLM_3744 7215c744f846427c405e79e155ac6411 176 Pfam PF01814 Hemerythrin HHE cation binding domain 18 151 2.3E-17 T 23-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DLM_0643 e346fac54e0b6a45efb0c06445935fe1 223 Gene3D G3DSA:1.10.1760.20 1 207 2.7E-9 T 23-10-2018 DLM_0643 e346fac54e0b6a45efb0c06445935fe1 223 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 3 207 6.6E-23 T 23-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 DLM_3834 e95664d468d85c417923312500ee6aad 226 Gene3D G3DSA:2.60.120.620 1 178 1.5E-40 T 23-10-2018 DLM_3834 e95664d468d85c417923312500ee6aad 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 46.847 T 23-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 DLM_3834 e95664d468d85c417923312500ee6aad 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 2.6E-13 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DLM_3834 e95664d468d85c417923312500ee6aad 226 SMART SM00702 1 177 1.1E-29 T 23-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 DLM_3834 e95664d468d85c417923312500ee6aad 226 Gene3D G3DSA:4.10.860.20 180 226 1.1E-19 T 23-10-2018 DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 Gene3D G3DSA:1.10.287.130 189 304 4.1E-18 T 23-10-2018 DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 3.0E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 3.0E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 3.0E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 SUPERFAMILY SSF47384 221 303 1.84E-13 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 453 5.2E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 302 1.4E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 SMART SM00388 238 303 2.9E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 SUPERFAMILY SSF55874 296 452 9.04E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 Gene3D G3DSA:3.30.565.10 307 454 3.0E-30 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3613 fa03bbc929d7c68e7b98a31ed1b0330f 455 SMART SM00387 346 454 1.1E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_4235 c518fddc322a545239ac4262136dc82c 460 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 50 453 2.6E-147 T 23-10-2018 IPR018721 Protein of unknown function DUF2252 DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 PIRSF PIRSF000876 3 362 3.2E-115 T 23-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 SUPERFAMILY SSF52172 4 109 3.7E-27 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 6 358 34.265 T 23-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 SUPERFAMILY SSF52738 171 360 1.31E-54 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 SMART SM00448 6 117 2.1E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 Pfam PF00072 Response regulator receiver domain 8 111 4.3E-22 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 Pfam PF01339 CheB methylesterase 173 353 1.6E-50 T 23-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 Gene3D G3DSA:3.40.50.2300 3 139 1.3E-29 T 23-10-2018 DLM_1234 cfd990e9aad4f8b188bee6240d6c7980 374 Gene3D G3DSA:3.40.50.180 168 356 2.8E-55 T 23-10-2018 IPR035909 Methylesterase CheB, C-terminal DLM_2288 5513e26b58a7cdc7de193212ce4e8ef5 210 SMART SM00463 118 200 2.3E-15 T 23-10-2018 IPR002625 Smr domain DLM_2288 5513e26b58a7cdc7de193212ce4e8ef5 210 SUPERFAMILY SSF160443 120 200 1.83E-14 T 23-10-2018 IPR036063 Smr domain superfamily DLM_2288 5513e26b58a7cdc7de193212ce4e8ef5 210 Gene3D G3DSA:3.30.1370.110 74 205 2.6E-36 T 23-10-2018 DLM_2288 5513e26b58a7cdc7de193212ce4e8ef5 210 Pfam PF01713 Smr domain 121 200 3.3E-22 T 23-10-2018 IPR002625 Smr domain DLM_2120 5d41662bf270c5c8d3e92a403ca57b20 702 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 35 - T 23-10-2018 IPR010916 TonB box, conserved site DLM_2120 5d41662bf270c5c8d3e92a403ca57b20 702 Gene3D G3DSA:2.40.170.20 166 702 5.6E-105 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_2120 5d41662bf270c5c8d3e92a403ca57b20 702 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 702 2.2E-97 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DLM_2120 5d41662bf270c5c8d3e92a403ca57b20 702 Pfam PF00593 TonB dependent receptor 227 695 1.7E-55 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DLM_2120 5d41662bf270c5c8d3e92a403ca57b20 702 SUPERFAMILY SSF56935 19 702 2.66E-119 T 23-10-2018 DLM_2120 5d41662bf270c5c8d3e92a403ca57b20 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 156 2.9E-16 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_2120 5d41662bf270c5c8d3e92a403ca57b20 702 Gene3D G3DSA:2.170.130.10 41 165 2.5E-28 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DLM_1023 605ea7881e5314d4a0e6bf6ef7151f62 339 Gene3D G3DSA:3.40.50.2300 168 300 3.9E-80 T 23-10-2018 DLM_1023 605ea7881e5314d4a0e6bf6ef7151f62 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 9.0E-18 T 23-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DLM_1023 605ea7881e5314d4a0e6bf6ef7151f62 339 Pfam PF13377 Periplasmic binding protein-like domain 178 339 3.7E-31 T 23-10-2018 DLM_1023 605ea7881e5314d4a0e6bf6ef7151f62 339 SUPERFAMILY SSF53822 69 325 2.36E-60 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1023 605ea7881e5314d4a0e6bf6ef7151f62 339 SMART SM00354 12 82 3.1E-28 T 23-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DLM_1023 605ea7881e5314d4a0e6bf6ef7151f62 339 Gene3D G3DSA:1.10.260.40 6 70 1.1E-22 T 23-10-2018 DLM_1023 605ea7881e5314d4a0e6bf6ef7151f62 339 Gene3D G3DSA:3.40.50.2300 75 319 3.9E-80 T 23-10-2018 DLM_1023 605ea7881e5314d4a0e6bf6ef7151f62 339 SUPERFAMILY SSF47413 13 70 1.01E-17 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 SMART SM00382 30 226 1.0E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 SMART SM00382 283 484 4.1 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 Gene3D G3DSA:3.40.50.300 2 252 1.5E-54 T 23-10-2018 DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 Pfam PF00005 ABC transporter 23 170 1.5E-26 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 SUPERFAMILY SSF52540 5 228 1.04E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 SUPERFAMILY SSF52540 248 486 5.53E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 Pfam PF00005 ABC transporter 274 435 1.4E-19 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1488 af1431d59c6ccd3a65893e33660e053f 508 Gene3D G3DSA:3.40.50.300 255 499 1.7E-44 T 23-10-2018 DLM_1904 c8467eed7a022cef55728d62dacc5645 276 Gene3D G3DSA:3.40.190.10 45 269 4.1E-56 T 23-10-2018 DLM_1904 c8467eed7a022cef55728d62dacc5645 276 SMART SM00062 37 273 3.1E-39 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1904 c8467eed7a022cef55728d62dacc5645 276 SUPERFAMILY SSF53850 9 274 3.55E-55 T 23-10-2018 DLM_1904 c8467eed7a022cef55728d62dacc5645 276 Gene3D G3DSA:3.40.190.10 123 230 4.1E-56 T 23-10-2018 DLM_1904 c8467eed7a022cef55728d62dacc5645 276 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 23-10-2018 IPR018313 Solute-binding protein family 3, conserved site DLM_1904 c8467eed7a022cef55728d62dacc5645 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 271 8.4E-51 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 Pfam PF00512 His Kinase A (phospho-acceptor) domain 173 236 1.6E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 SMART SM00387 281 387 2.4E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 SMART SM00388 172 238 3.2E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 281 384 2.2E-15 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 Gene3D G3DSA:3.30.565.10 233 385 1.3E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 SUPERFAMILY SSF55874 239 385 7.47E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 365 2.7E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 332 2.7E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 346 2.7E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 384 2.7E-16 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 SUPERFAMILY SSF47384 166 236 6.08E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2894 eaae57aad99da37e71958c0e4cbca71b 401 Gene3D G3DSA:1.10.287.130 157 232 8.0E-12 T 23-10-2018 DLM_2905 c0678beff3449df4ccedd319f4501353 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 4.0E-25 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2905 c0678beff3449df4ccedd319f4501353 51 Gene3D G3DSA:2.20.28.120 1 51 3.6E-28 T 23-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2905 c0678beff3449df4ccedd319f4501353 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.806 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2905 c0678beff3449df4ccedd319f4501353 51 SUPERFAMILY SSF57829 1 49 1.95E-19 T 23-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DLM_2905 c0678beff3449df4ccedd319f4501353 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_2905 c0678beff3449df4ccedd319f4501353 51 Pfam PF00471 Ribosomal protein L33 4 49 3.2E-19 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4358 be12fa7a8a960e3f9217e54196d07f76 211 Gene3D G3DSA:2.40.128.100 13 211 7.5E-15 T 23-10-2018 DLM_4358 be12fa7a8a960e3f9217e54196d07f76 211 SUPERFAMILY SSF69917 12 211 1.33E-32 T 23-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 DLM_1392 fcf7793b718a47708a51ff084d15c08e 355 SUPERFAMILY SSF161098 101 328 1.83E-22 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1392 fcf7793b718a47708a51ff084d15c08e 355 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 345 7.6E-45 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1724 f83fef26b9f376227a1af4846a4ec144 315 Pfam PF03466 LysR substrate binding domain 96 295 9.7E-34 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1724 f83fef26b9f376227a1af4846a4ec144 315 Gene3D G3DSA:1.10.10.10 6 92 2.4E-10 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1724 f83fef26b9f376227a1af4846a4ec144 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 60 1.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1724 f83fef26b9f376227a1af4846a4ec144 315 SUPERFAMILY SSF53850 97 301 1.16E-30 T 23-10-2018 DLM_1724 f83fef26b9f376227a1af4846a4ec144 315 SUPERFAMILY SSF46785 6 114 4.54E-10 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1724 f83fef26b9f376227a1af4846a4ec144 315 Gene3D G3DSA:3.40.190.290 96 303 2.3E-33 T 23-10-2018 DLM_0550 ef444266ad6be694099633e496f1692c 538 Gene3D G3DSA:3.40.1080.20 375 517 5.1E-37 T 23-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily DLM_0550 ef444266ad6be694099633e496f1692c 538 Gene3D G3DSA:3.40.1080.10 40 212 1.1E-10 T 23-10-2018 DLM_0550 ef444266ad6be694099633e496f1692c 538 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 46 254 1.3E-24 T 23-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 DLM_0550 ef444266ad6be694099633e496f1692c 538 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 356 502 6.7E-42 T 23-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain DLM_0550 ef444266ad6be694099633e496f1692c 538 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 46 535 3.0E-238 T 23-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 DLM_0550 ef444266ad6be694099633e496f1692c 538 SUPERFAMILY SSF100950 265 535 6.58E-83 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_0550 ef444266ad6be694099633e496f1692c 538 SUPERFAMILY SSF100950 37 261 7.33E-70 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_0550 ef444266ad6be694099633e496f1692c 538 Gene3D G3DSA:3.30.750.70 264 351 1.6E-5 T 23-10-2018 DLM_2992 69e0068032a718b14505f9395bfffb20 276 SUPERFAMILY SSF51658 30 268 1.61E-16 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_2992 69e0068032a718b14505f9395bfffb20 276 Pfam PF05114 Protein of unknown function (DUF692) 10 269 1.4E-103 T 23-10-2018 IPR007801 Uncharacterised protein family UPF0276 DLM_2992 69e0068032a718b14505f9395bfffb20 276 Hamap MF_00697 UPF0276 protein . 10 276 44.97 T 23-10-2018 IPR007801 Uncharacterised protein family UPF0276 DLM_2992 69e0068032a718b14505f9395bfffb20 276 Gene3D G3DSA:3.20.20.150 8 275 7.0E-88 T 23-10-2018 DLM_4139 7c465ac7cb89ecd8474c7b51593ae373 285 Gene3D G3DSA:1.10.3720.10 4 276 5.2E-54 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4139 7c465ac7cb89ecd8474c7b51593ae373 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 279 2.4E-16 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4139 7c465ac7cb89ecd8474c7b51593ae373 285 SUPERFAMILY SSF161098 8 285 1.57E-65 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0183 01af8d9798c4ee2cc229b1a6ec37436f 435 Pfam PF00155 Aminotransferase class I and II 76 415 3.4E-49 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_0183 01af8d9798c4ee2cc229b1a6ec37436f 435 SUPERFAMILY SSF53383 30 428 1.48E-99 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0183 01af8d9798c4ee2cc229b1a6ec37436f 435 Gene3D G3DSA:3.90.1150.10 47 424 7.0E-142 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0183 01af8d9798c4ee2cc229b1a6ec37436f 435 Gene3D G3DSA:3.40.640.10 79 320 7.0E-142 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1132 30fe662946114371c281ea227d78098b 267 Pfam PF00588 SpoU rRNA Methylase family 119 255 4.9E-38 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DLM_1132 30fe662946114371c281ea227d78098b 267 Gene3D G3DSA:3.40.1280.10 113 266 4.8E-50 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DLM_1132 30fe662946114371c281ea227d78098b 267 SUPERFAMILY SSF75217 118 262 3.86E-45 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases DLM_1132 30fe662946114371c281ea227d78098b 267 SUPERFAMILY SSF55315 6 109 1.6E-18 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like DLM_1132 30fe662946114371c281ea227d78098b 267 Gene3D G3DSA:3.30.1330.30 6 109 2.7E-15 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like DLM_1132 30fe662946114371c281ea227d78098b 267 SMART SM00967 36 111 1.7E-8 T 23-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DLM_0631 a52dc8862435c5c77ffbaa09a39c03d5 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.9E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0631 a52dc8862435c5c77ffbaa09a39c03d5 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.9E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0631 a52dc8862435c5c77ffbaa09a39c03d5 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.9E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0631 a52dc8862435c5c77ffbaa09a39c03d5 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.9E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_0631 a52dc8862435c5c77ffbaa09a39c03d5 262 Gene3D G3DSA:3.40.50.720 1 260 4.0E-56 T 23-10-2018 DLM_0631 a52dc8862435c5c77ffbaa09a39c03d5 262 SUPERFAMILY SSF51735 5 254 1.1E-60 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_0631 a52dc8862435c5c77ffbaa09a39c03d5 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 1.1E-82 T 23-10-2018 DLM_0631 a52dc8862435c5c77ffbaa09a39c03d5 262 PIRSF PIRSF000094 1 260 1.5E-118 T 23-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DLM_2770 6e4d83b267fba5a8c77f6038de3ec24a 187 Pfam PF06930 Protein of unknown function (DUF1282) 9 175 1.2E-13 T 23-10-2018 IPR009698 Protein of unknown function DUF1282 DLM_1199 2be3b0388c0bea5e07556896cb92b1c5 836 Pfam PF13208 TerB N-terminal domain 162 365 2.8E-58 T 23-10-2018 IPR025266 TerB, N-terminal DLM_1199 2be3b0388c0bea5e07556896cb92b1c5 836 SUPERFAMILY SSF158682 557 681 4.45E-20 T 23-10-2018 IPR029024 TerB-like DLM_1199 2be3b0388c0bea5e07556896cb92b1c5 836 Pfam PF05099 Tellurite resistance protein TerB 556 676 1.9E-10 T 23-10-2018 IPR007791 Co-chaperone DjlA, N-terminal DLM_1199 2be3b0388c0bea5e07556896cb92b1c5 836 Gene3D G3DSA:1.10.3680.10 553 677 8.3E-13 T 23-10-2018 IPR029024 TerB-like DLM_1199 2be3b0388c0bea5e07556896cb92b1c5 836 Pfam PF15615 TerB-C domain 698 834 3.4E-33 T 23-10-2018 IPR028932 TerB-C domain DLM_0380 fb365194f8b33dd3e942c2c9936229d1 64 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 4 46 9.9E-8 T 23-10-2018 IPR008621 Cbb3-type cytochrome oxidase component DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.4E-70 T 23-10-2018 DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 Gene3D G3DSA:3.40.50.720 1 246 5.9E-88 T 23-10-2018 DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.8E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.8E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.8E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.0E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.0E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.0E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.0E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 3.9E-4 T 23-10-2018 DLM_3067 91d0310b3be51c89c4cfbb8f78d29fd1 246 SUPERFAMILY SSF51735 4 246 3.84E-88 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3560 51406f6e1bea91c7ad09431c5b4bae63 302 Gene3D G3DSA:3.90.420.10 44 302 2.0E-103 T 23-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DLM_3560 51406f6e1bea91c7ad09431c5b4bae63 302 Pfam PF00174 Oxidoreductase molybdopterin binding domain 87 240 6.6E-29 T 23-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DLM_3560 51406f6e1bea91c7ad09431c5b4bae63 302 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 302 56.091 T 23-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 DLM_3560 51406f6e1bea91c7ad09431c5b4bae63 302 SUPERFAMILY SSF56524 55 298 2.35E-90 T 23-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DLM_1751 87e9b7918304fad60e8ff5d8f7c32b24 349 SUPERFAMILY SSF102114 101 297 5.1E-11 T 23-10-2018 DLM_1751 87e9b7918304fad60e8ff5d8f7c32b24 349 Gene3D G3DSA:3.20.20.70 65 319 7.0E-69 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_1751 87e9b7918304fad60e8ff5d8f7c32b24 349 PIRSF PIRSF006004 15 347 2.6E-90 T 23-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DLM_1751 87e9b7918304fad60e8ff5d8f7c32b24 349 Pfam PF04055 Radical SAM superfamily 103 262 1.2E-9 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_3034 0214ea91557babeebc08a14b820de861 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 269 1.4E-30 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_4282 5d0b0e8603bc5106f271693923e9bf42 193 Pfam PF13302 Acetyltransferase (GNAT) domain 33 157 1.1E-17 T 23-10-2018 IPR000182 GNAT domain DLM_4282 5d0b0e8603bc5106f271693923e9bf42 193 SUPERFAMILY SSF55729 7 181 7.15E-39 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_4282 5d0b0e8603bc5106f271693923e9bf42 193 Gene3D G3DSA:3.40.630.30 6 187 3.0E-41 T 23-10-2018 DLM_4454 1eae55a6eca7b708822832b7ec5c2028 230 Pfam PF07077 Protein of unknown function (DUF1345) 49 221 6.1E-60 T 23-10-2018 IPR009781 Protein of unknown function DUF1345 DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 315 2.4E-126 T 23-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 Gene3D G3DSA:3.40.50.20 6 117 6.0E-104 T 23-10-2018 DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 318 152.345 T 23-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 127 300 7.6E-74 T 23-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 Gene3D G3DSA:3.30.1490.20 140 204 6.0E-104 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 Gene3D G3DSA:3.30.470.20 118 298 6.0E-104 T 23-10-2018 DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 SUPERFAMILY SSF52440 1 125 1.5E-34 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 123 1.3E-39 T 23-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DLM_4301 7eaad8cf765b47a414aaafb1338c294b 318 SUPERFAMILY SSF56059 126 314 8.33E-54 T 23-10-2018 DLM_3413 e13b096ab4963dcde1b72f4857401046 179 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 179 20.518 T 23-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DLM_3413 e13b096ab4963dcde1b72f4857401046 179 Pfam PF03550 Outer membrane lipoprotein LolB 36 178 4.3E-35 T 23-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DLM_3413 e13b096ab4963dcde1b72f4857401046 179 SUPERFAMILY SSF89392 14 178 5.49E-37 T 23-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DLM_3413 e13b096ab4963dcde1b72f4857401046 179 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 36 178 1.8E-22 T 23-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DLM_3413 e13b096ab4963dcde1b72f4857401046 179 Gene3D G3DSA:2.50.20.10 24 179 3.2E-35 T 23-10-2018 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 360 374 - T 23-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 Pfam PF01479 S4 domain 259 304 2.0E-12 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 SMART SM00363 259 316 1.5E-10 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 SUPERFAMILY SSF55174 259 351 7.33E-17 T 23-10-2018 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 Gene3D G3DSA:3.10.290.10 255 312 3.6E-19 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 Gene3D G3DSA:3.30.70.1560 384 476 1.6E-47 T 23-10-2018 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 326 488 1.2E-49 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 Pfam PF00849 RNA pseudouridylate synthase 322 457 3.2E-16 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 SUPERFAMILY SSF55120 321 492 4.64E-41 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_0300 cf465df8557bc871233dd5e3b34b4adb 515 Gene3D G3DSA:3.30.70.580 323 483 1.6E-47 T 23-10-2018 DLM_1024 5fdc680a383d9554613b50f79d3e43ce 283 Pfam PF04231 Endonuclease I 109 275 3.3E-34 T 23-10-2018 IPR007346 Endonuclease I GO:0004518 DLM_1024 5fdc680a383d9554613b50f79d3e43ce 283 SUPERFAMILY SSF54060 72 275 5.06E-78 T 23-10-2018 DLM_0701 eb6f77ae99a478ffdcd463bc40c45e2c 134 SMART SM00422 7 74 2.8E-23 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_0701 eb6f77ae99a478ffdcd463bc40c45e2c 134 Pfam PF13411 MerR HTH family regulatory protein 7 72 2.1E-16 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_0701 eb6f77ae99a478ffdcd463bc40c45e2c 134 SUPERFAMILY SSF46955 7 122 6.96E-27 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_0701 eb6f77ae99a478ffdcd463bc40c45e2c 134 Gene3D G3DSA:1.10.1660.10 1 132 2.5E-26 T 23-10-2018 DLM_4365 8d3ad662cf209f956b72c8df5020f983 302 PIRSF PIRSF003097 9 298 1.0E-55 T 23-10-2018 IPR004513 Cell division protein FtsX GO:0016021 DLM_0187 e8e19de1eacf10062d52b7b603eff9a5 224 Gene3D G3DSA:2.30.30.760 165 223 1.1E-17 T 23-10-2018 DLM_0187 e8e19de1eacf10062d52b7b603eff9a5 224 Pfam PF13144 Chaperone for flagella basal body P-ring formation 27 221 3.5E-39 T 23-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DLM_0187 e8e19de1eacf10062d52b7b603eff9a5 224 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 88 222 3.7E-33 T 23-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DLM_0684 20deadf500ac6c9622cba1cee69da0c8 555 TIGRFAM TIGR00815 sulP: sulfate permease 11 540 6.5E-115 T 23-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 DLM_0684 20deadf500ac6c9622cba1cee69da0c8 555 Pfam PF00916 Sulfate permease family 22 384 7.2E-90 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DLM_0684 20deadf500ac6c9622cba1cee69da0c8 555 Gene3D G3DSA:3.30.750.24 430 543 5.3E-24 T 23-10-2018 IPR036513 STAS domain superfamily DLM_0684 20deadf500ac6c9622cba1cee69da0c8 555 Pfam PF01740 STAS domain 440 540 4.4E-10 T 23-10-2018 IPR002645 STAS domain DLM_0684 20deadf500ac6c9622cba1cee69da0c8 555 SUPERFAMILY SSF52091 439 545 1.47E-14 T 23-10-2018 IPR036513 STAS domain superfamily DLM_0352 fe091db2bde1b02be173c5296c5c766e 63 SUPERFAMILY SSF109910 2 62 2.35E-13 T 23-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DLM_0352 fe091db2bde1b02be173c5296c5c766e 63 Gene3D G3DSA:1.10.150.250 1 63 2.2E-16 T 23-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DLM_0352 fe091db2bde1b02be173c5296c5c766e 63 Pfam PF03937 Flavinator of succinate dehydrogenase 1 59 3.5E-14 T 23-10-2018 IPR005631 Flavinator of succinate dehydrogenase DLM_0787 02b6407a65ce8bf2e9f5f1895ab3fcaa 342 Pfam PF03864 Phage major capsid protein E 14 339 5.1E-87 T 23-10-2018 IPR005564 Major capsid protein GpE DLM_2169 f1bfcfe0a6db371d3d7dca1010cfb134 304 Pfam PF09375 Imelysin 63 296 1.3E-40 T 23-10-2018 IPR018976 Imelysin-like domain DLM_2169 f1bfcfe0a6db371d3d7dca1010cfb134 304 Gene3D G3DSA:1.20.1420.20 55 304 6.1E-99 T 23-10-2018 IPR038352 Imelysin-like domain superfamily DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.699 T 23-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 Gene3D G3DSA:3.10.430.100 61 148 3.2E-26 T 23-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 Gene3D G3DSA:3.40.5.10 1 50 3.1E-24 T 23-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 8.9E-24 T 23-10-2018 IPR020069 Ribosomal protein L9, C-terminal DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 1.9E-45 T 23-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.6E-23 T 23-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 SUPERFAMILY SSF55653 60 147 1.11E-24 T 23-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DLM_3124 7f5cd8070aba5ed951c62eb1b605c990 149 SUPERFAMILY SSF55658 1 57 2.44E-19 T 23-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DLM_0984 14e413a1750b82ce275f59331160fc98 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.0E-24 T 23-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DLM_0984 14e413a1750b82ce275f59331160fc98 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.0E-24 T 23-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DLM_0984 14e413a1750b82ce275f59331160fc98 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.0E-24 T 23-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DLM_0984 14e413a1750b82ce275f59331160fc98 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.2E-31 T 23-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DLM_0984 14e413a1750b82ce275f59331160fc98 89 PIRSF PIRSF004669 1 89 1.6E-34 T 23-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DLM_0984 14e413a1750b82ce275f59331160fc98 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 8.3E-33 T 23-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 SUPERFAMILY SSF53850 199 411 9.19E-34 T 23-10-2018 DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 SUPERFAMILY SSF46785 14 97 2.44E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 SUPERFAMILY SSF46785 109 220 7.56E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 Gene3D G3DSA:3.40.190.10 276 379 3.6E-53 T 23-10-2018 DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 Pfam PF03466 LysR substrate binding domain 197 407 1.3E-30 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 Gene3D G3DSA:3.40.190.10 203 396 3.6E-53 T 23-10-2018 DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 114 172 3.6E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 2.4E-13 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 Gene3D G3DSA:1.10.10.10 13 100 2.9E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2054 5180e7341d8850a45136f08c15ea08d8 417 Gene3D G3DSA:1.10.10.10 112 199 2.3E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2104 ce8885036326906d046a301c9d84e8a3 173 Gene3D G3DSA:3.40.80.10 2 164 2.2E-35 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_2104 ce8885036326906d046a301c9d84e8a3 173 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 3 152 4.4E-20 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_2104 ce8885036326906d046a301c9d84e8a3 173 SMART SM00644 2 140 5.7E-4 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_2104 ce8885036326906d046a301c9d84e8a3 173 ProSitePatterns PS00018 EF-hand calcium-binding domain. 134 146 - T 23-10-2018 IPR018247 EF-Hand 1, calcium-binding site DLM_2104 ce8885036326906d046a301c9d84e8a3 173 SUPERFAMILY SSF55846 2 159 1.31E-31 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_2721 de4adf13862a5e0a4bfd8a667bf6658c 302 Gene3D G3DSA:1.10.1670.40 103 297 5.9E-41 T 23-10-2018 DLM_2721 de4adf13862a5e0a4bfd8a667bf6658c 302 Gene3D G3DSA:1.10.340.30 125 246 5.9E-41 T 23-10-2018 DLM_2721 de4adf13862a5e0a4bfd8a667bf6658c 302 SMART SM00478 137 299 6.3E-10 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DLM_2721 de4adf13862a5e0a4bfd8a667bf6658c 302 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 134 282 2.3E-11 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DLM_2721 de4adf13862a5e0a4bfd8a667bf6658c 302 SUPERFAMILY SSF48150 118 297 4.36E-35 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DLM_1953 6d2c72bbdd5a495e3820294b0b65d397 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 262 2.1E-14 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1953 6d2c72bbdd5a495e3820294b0b65d397 272 SUPERFAMILY SSF161098 12 267 7.52E-59 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1953 6d2c72bbdd5a495e3820294b0b65d397 272 Gene3D G3DSA:1.10.3720.10 10 270 1.7E-57 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1203 3f9b365ef59165d77874cc9a8314b937 147 Gene3D G3DSA:2.60.120.10 2 145 3.9E-46 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_1203 3f9b365ef59165d77874cc9a8314b937 147 SUPERFAMILY SSF51182 15 144 2.22E-27 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_1203 3f9b365ef59165d77874cc9a8314b937 147 Pfam PF07883 Cupin domain 50 113 9.3E-10 T 23-10-2018 IPR013096 Cupin 2, conserved barrel DLM_3416 0e2f2175428e258b432547789d572090 273 Pfam PF00149 Calcineurin-like phosphoesterase 4 158 3.9E-13 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DLM_3416 0e2f2175428e258b432547789d572090 273 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 269 2.2E-87 T 23-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DLM_3416 0e2f2175428e258b432547789d572090 273 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 45.719 T 23-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DLM_3416 0e2f2175428e258b432547789d572090 273 Gene3D G3DSA:3.60.21.10 1 273 2.9E-76 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like DLM_3416 0e2f2175428e258b432547789d572090 273 PIRSF PIRSF000903 1 271 3.6E-110 T 23-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DLM_3416 0e2f2175428e258b432547789d572090 273 SUPERFAMILY SSF56300 1 256 4.81E-52 T 23-10-2018 DLM_3571 afbdc3cd16af61a01e69e00ee1d4406a 272 Pfam PF03239 Iron permease FTR1 family 3 251 2.0E-21 T 23-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 DLM_4271 e4e9fbcfb6e360d2aa08507bca8f7cee 59 Pfam PF11943 Protein of unknown function (DUF3460) 1 57 6.5E-27 T 23-10-2018 IPR021853 Protein of unknown function DUF3460 DLM_1573 31c5d1cdad32f5b5a2afc8f52d978532 545 Gene3D G3DSA:3.10.310.70 81 199 1.9E-122 T 23-10-2018 DLM_1573 31c5d1cdad32f5b5a2afc8f52d978532 545 SUPERFAMILY SSF51556 62 494 1.76E-26 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_1573 31c5d1cdad32f5b5a2afc8f52d978532 545 Pfam PF07969 Amidohydrolase family 53 534 5.5E-76 T 23-10-2018 IPR013108 Amidohydrolase 3 DLM_1573 31c5d1cdad32f5b5a2afc8f52d978532 545 Gene3D G3DSA:3.20.20.140 63 494 1.9E-122 T 23-10-2018 DLM_1573 31c5d1cdad32f5b5a2afc8f52d978532 545 SUPERFAMILY SSF51338 6 536 3.39E-10 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_1573 31c5d1cdad32f5b5a2afc8f52d978532 545 Gene3D G3DSA:2.30.40.10 9 508 1.9E-122 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DLM_4205 fe15ca450625d87b2d42f56c36734590 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.202 T 23-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_4205 fe15ca450625d87b2d42f56c36734590 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 4.4E-61 T 23-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_4205 fe15ca450625d87b2d42f56c36734590 159 SUPERFAMILY SSF55040 11 155 8.24E-60 T 23-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_4205 fe15ca450625d87b2d42f56c36734590 159 Gene3D G3DSA:3.30.70.640 1 159 1.0E-68 T 23-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_4205 fe15ca450625d87b2d42f56c36734590 159 Pfam PF01967 MoaC family 15 150 2.7E-54 T 23-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_1987 957f29468d6c4cec917172e581cf6621 108 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 103 9.7E-29 T 23-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DLM_1987 957f29468d6c4cec917172e581cf6621 108 SUPERFAMILY SSF55248 16 104 3.53E-31 T 23-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DLM_1987 957f29468d6c4cec917172e581cf6621 108 Gene3D G3DSA:3.30.1360.20 8 108 1.9E-30 T 23-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DLM_1987 957f29468d6c4cec917172e581cf6621 108 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 105 22.497 T 23-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DLM_0314 24b1704ab86771fb888471c425ce4c6f 175 Pfam PF00719 Inorganic pyrophosphatase 18 172 2.6E-49 T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DLM_0314 24b1704ab86771fb888471c425ce4c6f 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 34.207 T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DLM_0314 24b1704ab86771fb888471c425ce4c6f 175 SUPERFAMILY SSF50324 6 174 1.44E-64 T 23-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DLM_0314 24b1704ab86771fb888471c425ce4c6f 175 Gene3D G3DSA:3.90.80.10 1 175 8.0E-67 T 23-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DLM_0314 24b1704ab86771fb888471c425ce4c6f 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DLM_3541 767ec03399cd6bc76be3d404bec3abee 363 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 16 359 1.0E-94 T 23-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative DLM_3541 767ec03399cd6bc76be3d404bec3abee 363 Gene3D G3DSA:3.40.50.2000 180 363 4.2E-45 T 23-10-2018 DLM_3541 767ec03399cd6bc76be3d404bec3abee 363 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 90 334 1.4E-40 T 23-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DLM_3541 767ec03399cd6bc76be3d404bec3abee 363 Gene3D G3DSA:3.40.50.2000 9 175 1.2E-40 T 23-10-2018 DLM_3541 767ec03399cd6bc76be3d404bec3abee 363 SUPERFAMILY SSF53756 15 360 2.25E-83 T 23-10-2018 DLM_3219 ca5dbe9797fdebd0fde9a52a239767d6 164 Pfam PF02082 Transcriptional regulator 1 83 8.4E-28 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type DLM_3219 ca5dbe9797fdebd0fde9a52a239767d6 164 SUPERFAMILY SSF46785 2 132 3.82E-35 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3219 ca5dbe9797fdebd0fde9a52a239767d6 164 Gene3D G3DSA:1.10.10.10 1 144 9.1E-51 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3219 ca5dbe9797fdebd0fde9a52a239767d6 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.1E-64 T 23-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 DLM_3219 ca5dbe9797fdebd0fde9a52a239767d6 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 6.2E-44 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type DLM_2228 d501c1435ba18dafee2ddd2535d28565 217 SUPERFAMILY SSF55469 12 211 2.22E-49 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_2228 d501c1435ba18dafee2ddd2535d28565 217 Gene3D G3DSA:3.40.109.10 1 186 2.5E-45 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_2228 d501c1435ba18dafee2ddd2535d28565 217 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 205 2.0E-79 T 23-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 DLM_2228 d501c1435ba18dafee2ddd2535d28565 217 Pfam PF00881 Nitroreductase family 16 180 2.9E-29 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DLM_0823 c85f35ec9ebb35a1ba8e35b419493643 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 68 87 1.3E-11 T 23-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DLM_0823 c85f35ec9ebb35a1ba8e35b419493643 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 125 138 1.3E-11 T 23-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DLM_0823 c85f35ec9ebb35a1ba8e35b419493643 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 1.3E-11 T 23-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DLM_0823 c85f35ec9ebb35a1ba8e35b419493643 148 Gene3D G3DSA:3.90.79.10 2 141 2.4E-35 T 23-10-2018 DLM_0823 c85f35ec9ebb35a1ba8e35b419493643 148 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_0823 c85f35ec9ebb35a1ba8e35b419493643 148 SUPERFAMILY SSF55811 7 143 4.74E-27 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_0823 c85f35ec9ebb35a1ba8e35b419493643 148 Pfam PF00293 NUDIX domain 5 136 3.5E-17 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 Pfam PF00085 Thioredoxin 13 111 3.5E-24 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 TIGRFAM TIGR01068 thioredoxin: thioredoxin 17 111 2.9E-30 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 ProSitePatterns PS00194 Thioredoxin family active site. 31 49 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 SUPERFAMILY SSF52833 10 112 4.13E-32 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 Gene3D G3DSA:3.40.30.10 3 119 1.1E-29 T 23-10-2018 DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 PIRSF PIRSF000077 9 113 3.3E-27 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 PRINTS PR00421 Thioredoxin family signature 30 38 5.4E-7 T 23-10-2018 DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 PRINTS PR00421 Thioredoxin family signature 77 88 5.4E-7 T 23-10-2018 DLM_3208 5b9c2b760f1bfca9e647a9dd0f1a82c9 129 PRINTS PR00421 Thioredoxin family signature 38 47 5.4E-7 T 23-10-2018 DLM_0603 1bc98db14600de7e9d5d91a1cc19499d 377 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 33 365 1.3E-26 T 23-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DLM_0603 1bc98db14600de7e9d5d91a1cc19499d 377 Gene3D G3DSA:3.40.630.10 1 287 5.4E-82 T 23-10-2018 DLM_0603 1bc98db14600de7e9d5d91a1cc19499d 377 SUPERFAMILY SSF53187 14 366 2.81E-38 T 23-10-2018 DLM_1554 1b63a4f672448f5801f45e80256ca2a7 353 Gene3D G3DSA:3.10.310.10 179 331 3.6E-114 T 23-10-2018 DLM_1554 1b63a4f672448f5801f45e80256ca2a7 353 SUPERFAMILY SSF54506 46 353 3.14E-99 T 23-10-2018 DLM_1554 1b63a4f672448f5801f45e80256ca2a7 353 Gene3D G3DSA:3.10.310.10 51 349 3.6E-114 T 23-10-2018 DLM_1554 1b63a4f672448f5801f45e80256ca2a7 353 PIRSF PIRSF029792 43 353 7.1E-102 T 23-10-2018 IPR008794 Proline racemase family DLM_1554 1b63a4f672448f5801f45e80256ca2a7 353 Pfam PF05544 Proline racemase 51 353 1.3E-99 T 23-10-2018 IPR008794 Proline racemase family DLM_2675 358cf3bd4adabaa410fd3e82c1921456 472 PIRSF PIRSF007349 3 472 1.4E-182 T 23-10-2018 IPR007067 Tail sheath protein DLM_2675 358cf3bd4adabaa410fd3e82c1921456 472 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 207 360 4.8E-14 T 23-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain DLM_2675 358cf3bd4adabaa410fd3e82c1921456 472 Pfam PF17482 Phage tail sheath C-terminal domain 370 469 1.8E-13 T 23-10-2018 IPR020287 Tail sheath protein, C-terminal domain DLM_0461 f6da20254335b5bbf052ab0b8baecd04 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 6.1E-59 T 23-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DLM_0461 f6da20254335b5bbf052ab0b8baecd04 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 82.859 T 23-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DLM_0461 f6da20254335b5bbf052ab0b8baecd04 152 Pfam PF03477 ATP cone domain 50 136 5.8E-15 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DLM_2746 c8b5eea8fd552c36701fc142d0da9d0a 387 Gene3D G3DSA:1.20.1250.20 1 373 5.0E-24 T 23-10-2018 DLM_2746 c8b5eea8fd552c36701fc142d0da9d0a 387 Pfam PF07690 Major Facilitator Superfamily 3 256 1.3E-11 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2746 c8b5eea8fd552c36701fc142d0da9d0a 387 SUPERFAMILY SSF103473 5 378 6.93E-26 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3581 cd2617050e1cc3a920c5e42eff9dc7b9 144 Gene3D G3DSA:3.40.190.10 93 119 2.0E-25 T 23-10-2018 DLM_3581 cd2617050e1cc3a920c5e42eff9dc7b9 144 Pfam PF03466 LysR substrate binding domain 21 122 5.3E-13 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3581 cd2617050e1cc3a920c5e42eff9dc7b9 144 SUPERFAMILY SSF53850 17 124 1.54E-14 T 23-10-2018 DLM_3581 cd2617050e1cc3a920c5e42eff9dc7b9 144 Gene3D G3DSA:3.40.190.10 5 92 2.0E-25 T 23-10-2018 DLM_2605 92ac1f613f4433cd308878f9cab0d995 262 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 2.9E-20 T 23-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal DLM_2605 92ac1f613f4433cd308878f9cab0d995 262 Gene3D G3DSA:3.10.620.30 67 253 3.4E-43 T 23-10-2018 DLM_2605 92ac1f613f4433cd308878f9cab0d995 262 Pfam PF01841 Transglutaminase-like superfamily 112 213 2.5E-22 T 23-10-2018 IPR002931 Transglutaminase-like DLM_2605 92ac1f613f4433cd308878f9cab0d995 262 SMART SM00460 152 216 3.7E-13 T 23-10-2018 IPR002931 Transglutaminase-like DLM_2605 92ac1f613f4433cd308878f9cab0d995 262 SUPERFAMILY SSF54001 7 243 5.69E-39 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DLM_3743 dcc526cec364584db9fc990777e1479e 339 Pfam PF13673 Acetyltransferase (GNAT) domain 55 151 1.4E-10 T 23-10-2018 IPR000182 GNAT domain DLM_3743 dcc526cec364584db9fc990777e1479e 339 Gene3D G3DSA:3.40.80.10 162 337 5.8E-54 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_3743 dcc526cec364584db9fc990777e1479e 339 SMART SM00644 176 323 8.8E-44 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_3743 dcc526cec364584db9fc990777e1479e 339 SUPERFAMILY SSF55846 164 335 2.88E-59 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_3743 dcc526cec364584db9fc990777e1479e 339 Gene3D G3DSA:3.40.630.30 14 143 6.3E-13 T 23-10-2018 DLM_3743 dcc526cec364584db9fc990777e1479e 339 SUPERFAMILY SSF55729 26 150 1.56E-14 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3743 dcc526cec364584db9fc990777e1479e 339 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 186 324 4.6E-24 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DLM_4377 1eba5c8dc00902d9beb1896bba25b8c1 118 PRINTS PR01650 Bacterial translocase SecE signature 34 55 4.6E-13 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DLM_4377 1eba5c8dc00902d9beb1896bba25b8c1 118 PRINTS PR01650 Bacterial translocase SecE signature 79 99 4.6E-13 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DLM_4377 1eba5c8dc00902d9beb1896bba25b8c1 118 PRINTS PR01650 Bacterial translocase SecE signature 55 75 4.6E-13 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DLM_4377 1eba5c8dc00902d9beb1896bba25b8c1 118 Gene3D G3DSA:1.20.5.1030 56 112 1.8E-15 T 23-10-2018 IPR038379 SecE superfamily DLM_4377 1eba5c8dc00902d9beb1896bba25b8c1 118 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 58 109 1.5E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DLM_4377 1eba5c8dc00902d9beb1896bba25b8c1 118 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 60 109 3.9E-18 T 23-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DLM_4377 1eba5c8dc00902d9beb1896bba25b8c1 118 Hamap MF_00422 Protein translocase subunit SecE [secE]. 56 113 10.984 T 23-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DLM_1241 66d06de2389f955ba01dc628822cf44d 375 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 147 246 7.0E-23 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1241 66d06de2389f955ba01dc628822cf44d 375 SUPERFAMILY SSF58104 63 331 3.4E-35 T 23-10-2018 DLM_1241 66d06de2389f955ba01dc628822cf44d 375 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 91 120 1.3E-17 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1241 66d06de2389f955ba01dc628822cf44d 375 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 197 226 1.3E-17 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1241 66d06de2389f955ba01dc628822cf44d 375 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 195 1.3E-17 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1241 66d06de2389f955ba01dc628822cf44d 375 Gene3D G3DSA:1.10.287.950 43 346 5.2E-35 T 23-10-2018 DLM_1241 66d06de2389f955ba01dc628822cf44d 375 SMART SM00283 76 334 4.1E-6 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2622 0fb51a8d42b773e281d34ea4bb49b669 392 Pfam PF13458 Periplasmic binding protein 24 365 2.7E-63 T 23-10-2018 IPR028081 Leucine-binding protein domain DLM_2622 0fb51a8d42b773e281d34ea4bb49b669 392 SUPERFAMILY SSF53822 24 386 9.08E-80 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_2622 0fb51a8d42b773e281d34ea4bb49b669 392 Gene3D G3DSA:3.40.50.2300 150 278 2.9E-78 T 23-10-2018 DLM_2622 0fb51a8d42b773e281d34ea4bb49b669 392 Gene3D G3DSA:3.40.50.2300 26 349 2.9E-78 T 23-10-2018 DLM_2622 0fb51a8d42b773e281d34ea4bb49b669 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 1.3E-6 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_2622 0fb51a8d42b773e281d34ea4bb49b669 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 1.3E-6 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_2622 0fb51a8d42b773e281d34ea4bb49b669 392 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 66 84 1.3E-6 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DLM_4034 5eaedf439fa9d32d0b7e30f43f7f43ce 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 8.0E-203 T 23-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DLM_4034 5eaedf439fa9d32d0b7e30f43f7f43ce 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DLM_4034 5eaedf439fa9d32d0b7e30f43f7f43ce 354 SUPERFAMILY SSF51569 1 329 1.9E-106 T 23-10-2018 DLM_4034 5eaedf439fa9d32d0b7e30f43f7f43ce 354 PIRSF PIRSF001359 1 329 9.4E-84 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DLM_4034 5eaedf439fa9d32d0b7e30f43f7f43ce 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 327 5.5E-91 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DLM_4034 5eaedf439fa9d32d0b7e30f43f7f43ce 354 Gene3D G3DSA:3.20.20.70 1 354 1.3E-152 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_4034 5eaedf439fa9d32d0b7e30f43f7f43ce 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 2.5E-97 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DLM_4034 5eaedf439fa9d32d0b7e30f43f7f43ce 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DLM_0188 9b94d63aaa4a119afd9ca59bfaffcafd 99 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 92 1.2E-20 T 23-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 DLM_0188 9b94d63aaa4a119afd9ca59bfaffcafd 99 SUPERFAMILY SSF101498 2 92 5.36E-14 T 23-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily DLM_0188 9b94d63aaa4a119afd9ca59bfaffcafd 99 Pfam PF04316 Anti-sigma-28 factor, FlgM 37 90 2.2E-14 T 23-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DLM_3582 3da2117782cbac8564b31d138eec2bea 61 SUPERFAMILY SSF53850 1 35 3.44E-8 T 23-10-2018 DLM_3582 3da2117782cbac8564b31d138eec2bea 61 Gene3D G3DSA:3.40.190.10 1 44 6.0E-12 T 23-10-2018 DLM_3582 3da2117782cbac8564b31d138eec2bea 61 Pfam PF03466 LysR substrate binding domain 1 36 1.1E-8 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1131 4f6ecd2d2583660d8179c60d1266c396 440 Pfam PF08668 HDOD domain 16 155 2.5E-7 T 23-10-2018 IPR013976 Metal-dependent hydrolase HDOD DLM_1131 4f6ecd2d2583660d8179c60d1266c396 440 SUPERFAMILY SSF109604 10 251 3.77E-17 T 23-10-2018 DLM_1131 4f6ecd2d2583660d8179c60d1266c396 440 Gene3D G3DSA:3.30.450.40 291 436 1.3E-7 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_1131 4f6ecd2d2583660d8179c60d1266c396 440 Gene3D G3DSA:1.10.3210.10 4 232 9.0E-13 T 23-10-2018 DLM_1131 4f6ecd2d2583660d8179c60d1266c396 440 SUPERFAMILY SSF55781 300 431 7.61E-6 T 23-10-2018 DLM_0699 425e9680ff3cf26805a9013b33973efe 532 Pfam PF01039 Carboxyl transferase domain 48 522 8.7E-150 T 23-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DLM_0699 425e9680ff3cf26805a9013b33973efe 532 SUPERFAMILY SSF52096 237 515 9.67E-87 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_0699 425e9680ff3cf26805a9013b33973efe 532 SUPERFAMILY SSF52096 22 270 3.02E-72 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_0699 425e9680ff3cf26805a9013b33973efe 532 Gene3D G3DSA:3.90.226.10 274 532 6.6E-104 T 23-10-2018 DLM_0699 425e9680ff3cf26805a9013b33973efe 532 Gene3D G3DSA:3.90.226.10 1 272 1.2E-98 T 23-10-2018 DLM_3998 fc61c0bf9ef72254dd85218d86cb639e 425 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 424 7.5E-186 T 23-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DLM_3998 fc61c0bf9ef72254dd85218d86cb639e 425 SUPERFAMILY SSF53383 2 424 1.87E-127 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_3998 fc61c0bf9ef72254dd85218d86cb639e 425 Gene3D G3DSA:3.90.1150.10 7 417 5.0E-172 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3998 fc61c0bf9ef72254dd85218d86cb639e 425 Gene3D G3DSA:3.40.640.10 69 317 5.0E-172 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_3998 fc61c0bf9ef72254dd85218d86cb639e 425 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 101.893 T 23-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DLM_3998 fc61c0bf9ef72254dd85218d86cb639e 425 Pfam PF00202 Aminotransferase class-III 33 395 8.6E-75 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_3998 fc61c0bf9ef72254dd85218d86cb639e 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DLM_2357 95754f9524959d5c4a765c96d536a829 148 SUPERFAMILY SSF82784 8 147 3.27E-44 T 23-10-2018 IPR036102 OsmC/Ohr superfamily DLM_2357 95754f9524959d5c4a765c96d536a829 148 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 14 146 4.6E-56 T 23-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DLM_2357 95754f9524959d5c4a765c96d536a829 148 Pfam PF02566 OsmC-like protein 51 145 1.9E-16 T 23-10-2018 IPR003718 OsmC/Ohr family DLM_2357 95754f9524959d5c4a765c96d536a829 148 Gene3D G3DSA:2.20.25.10 2 54 1.9E-23 T 23-10-2018 DLM_2357 95754f9524959d5c4a765c96d536a829 148 Gene3D G3DSA:3.30.300.20 55 148 1.4E-33 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_2457 f60dd9bcc42cb62aa844cb94d7c94b5d 207 Gene3D G3DSA:3.20.20.70 2 204 2.7E-64 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2457 f60dd9bcc42cb62aa844cb94d7c94b5d 207 SUPERFAMILY SSF51366 4 202 8.95E-58 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DLM_2457 f60dd9bcc42cb62aa844cb94d7c94b5d 207 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 199 1.0E-42 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DLM_2457 f60dd9bcc42cb62aa844cb94d7c94b5d 207 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 205 40.953 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 3 899 18.356 T 23-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 131 142 - T 23-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 556 568 - T 23-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 Gene3D G3DSA:1.20.1440.90 269 392 2.6E-9 T 23-10-2018 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 899 3.1E-265 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 SUPERFAMILY SSF51621 12 899 8.79E-279 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 130 143 3.5E-55 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 241 256 3.5E-55 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 726 752 3.5E-55 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 554 574 3.5E-55 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 390 410 3.5E-55 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 183 199 3.5E-55 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_4124 a96b1c3e910f712c2565471fc4c819a3 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 596 625 3.5E-55 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DLM_0091 a44f79c0ab66709e6da6df88f579724a 139 Pfam PF01575 MaoC like domain 14 113 9.1E-27 T 23-10-2018 IPR002539 MaoC-like dehydratase domain DLM_0091 a44f79c0ab66709e6da6df88f579724a 139 SUPERFAMILY SSF54637 2 138 9.19E-43 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_0091 a44f79c0ab66709e6da6df88f579724a 139 Gene3D G3DSA:3.10.129.10 1 137 5.9E-46 T 23-10-2018 DLM_3164 dbf4fd16da46e0bff048c80264aa311f 240 Gene3D G3DSA:3.40.50.620 24 157 1.3E-9 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_3164 dbf4fd16da46e0bff048c80264aa311f 240 Pfam PF02698 DUF218 domain 34 137 4.7E-16 T 23-10-2018 IPR003848 Domain of unknown function DUF218 DLM_2779 e60d877e8c53ebb2813b567e6062f981 410 Gene3D G3DSA:1.20.1250.20 5 396 1.6E-57 T 23-10-2018 DLM_2779 e60d877e8c53ebb2813b567e6062f981 410 Pfam PF07690 Major Facilitator Superfamily 16 228 2.2E-31 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2779 e60d877e8c53ebb2813b567e6062f981 410 SUPERFAMILY SSF103473 8 395 9.68E-60 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2248 37c834965f18d25bbb9d2b065b9d754e 530 SMART SM00052 256 500 4.2E-69 T 23-10-2018 IPR001633 EAL domain DLM_2248 37c834965f18d25bbb9d2b065b9d754e 530 Gene3D G3DSA:3.20.20.450 257 510 1.3E-69 T 23-10-2018 IPR035919 EAL domain superfamily DLM_2248 37c834965f18d25bbb9d2b065b9d754e 530 Pfam PF00563 EAL domain 264 495 7.6E-57 T 23-10-2018 IPR001633 EAL domain DLM_2248 37c834965f18d25bbb9d2b065b9d754e 530 SUPERFAMILY SSF141868 263 509 1.2E-67 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0844 b975250206b7d3db4bae695e38cb62cc 442 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 429 4.9E-128 T 23-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DLM_0844 b975250206b7d3db4bae695e38cb62cc 442 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 435 2.1E-153 T 23-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DLM_0844 b975250206b7d3db4bae695e38cb62cc 442 PIRSF PIRSF006066 1 441 1.0E-145 T 23-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DLM_3664 32c3209233f6d08c9403b37399fb44c8 156 SUPERFAMILY SSF81573 63 121 4.84E-13 T 23-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DLM_3664 32c3209233f6d08c9403b37399fb44c8 156 Gene3D G3DSA:1.20.5.620 62 122 1.8E-18 T 23-10-2018 DLM_3664 32c3209233f6d08c9403b37399fb44c8 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.935 T 23-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DLM_3664 32c3209233f6d08c9403b37399fb44c8 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.0E-34 T 23-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DLM_3664 32c3209233f6d08c9403b37399fb44c8 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 154 1.5E-47 T 23-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 DLM_1349 4993907257edccfae9ca9be66793f6ed 70 SUPERFAMILY SSF47413 6 67 3.1E-6 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_1349 4993907257edccfae9ca9be66793f6ed 70 Gene3D G3DSA:1.10.260.40 4 68 1.7E-9 T 23-10-2018 DLM_1701 a86c7dc25a69ebd28b37e01cd19210d1 246 SUPERFAMILY SSF52172 11 141 9.39E-39 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1701 a86c7dc25a69ebd28b37e01cd19210d1 246 SMART SM00862 166 242 2.4E-18 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_1701 a86c7dc25a69ebd28b37e01cd19210d1 246 Gene3D G3DSA:1.10.10.10 140 244 4.0E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1701 a86c7dc25a69ebd28b37e01cd19210d1 246 Pfam PF00072 Response regulator receiver domain 19 126 9.9E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1701 a86c7dc25a69ebd28b37e01cd19210d1 246 SUPERFAMILY SSF46894 138 242 4.82E-19 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_1701 a86c7dc25a69ebd28b37e01cd19210d1 246 Gene3D G3DSA:3.40.50.2300 11 136 1.9E-34 T 23-10-2018 DLM_1701 a86c7dc25a69ebd28b37e01cd19210d1 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 170 242 3.5E-16 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DLM_1701 a86c7dc25a69ebd28b37e01cd19210d1 246 SMART SM00448 17 127 4.9E-37 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2500 a9ff313012dcb7db1167c97631ca3dab 201 Gene3D G3DSA:3.40.50.850 1 189 2.0E-49 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_2500 a9ff313012dcb7db1167c97631ca3dab 201 SUPERFAMILY SSF52499 3 189 1.96E-49 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_2500 a9ff313012dcb7db1167c97631ca3dab 201 Pfam PF00857 Isochorismatase family 10 184 4.8E-37 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 DLM_2233 18bed5bc8efb2f5d74268a5e593a4042 177 Pfam PF11745 Protein of unknown function (DUF3304) 60 146 5.8E-21 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_3000 1289d6c6eeb7e729bc984e96428fd0a2 228 Pfam PF02230 Phospholipase/Carboxylesterase 5 207 2.4E-35 T 23-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 DLM_3000 1289d6c6eeb7e729bc984e96428fd0a2 228 SUPERFAMILY SSF53474 7 206 1.39E-33 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3000 1289d6c6eeb7e729bc984e96428fd0a2 228 Gene3D G3DSA:3.40.50.1820 2 205 1.3E-36 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3150 52f1735e4b7574091ebd83843387aa7f 236 Pfam PF00574 Clp protease 54 163 5.4E-12 T 23-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DLM_3150 52f1735e4b7574091ebd83843387aa7f 236 Gene3D G3DSA:3.90.226.10 31 189 6.4E-22 T 23-10-2018 DLM_3150 52f1735e4b7574091ebd83843387aa7f 236 SUPERFAMILY SSF52096 38 181 6.21E-21 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_3150 52f1735e4b7574091ebd83843387aa7f 236 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 6.6E-6 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_3150 52f1735e4b7574091ebd83843387aa7f 236 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 6.6E-6 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DLM_1430 729afc8ed6cac42ae7f1a8146ffcd77b 182 Gene3D G3DSA:3.40.50.360 1 182 9.9E-52 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_1430 729afc8ed6cac42ae7f1a8146ffcd77b 182 Pfam PF03358 NADPH-dependent FMN reductase 5 146 3.7E-36 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DLM_1430 729afc8ed6cac42ae7f1a8146ffcd77b 182 SUPERFAMILY SSF52218 5 173 9.94E-43 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_1227 879737edaf5b2ec1ea1dd31fc634b10b 472 SUPERFAMILY SSF53720 11 445 1.31E-113 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_1227 879737edaf5b2ec1ea1dd31fc634b10b 472 PIRSF PIRSF036492 1 472 9.5E-151 T 23-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DLM_1227 879737edaf5b2ec1ea1dd31fc634b10b 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DLM_1227 879737edaf5b2ec1ea1dd31fc634b10b 472 Gene3D G3DSA:3.40.605.10 24 441 1.3E-146 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_1227 879737edaf5b2ec1ea1dd31fc634b10b 472 Gene3D G3DSA:3.40.309.10 217 421 1.3E-146 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_1227 879737edaf5b2ec1ea1dd31fc634b10b 472 Pfam PF00171 Aldehyde dehydrogenase family 8 441 3.8E-89 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0534 f0b0c2c8eab568eaf4207413ba40de14 399 Gene3D G3DSA:3.40.50.150 115 386 3.1E-100 T 23-10-2018 DLM_0534 f0b0c2c8eab568eaf4207413ba40de14 399 PIRSF PIRSF003085 1 398 2.6E-126 T 23-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 DLM_0534 f0b0c2c8eab568eaf4207413ba40de14 399 Pfam PF02353 Mycolic acid cyclopropane synthetase 107 378 4.0E-100 T 23-10-2018 DLM_0534 f0b0c2c8eab568eaf4207413ba40de14 399 SUPERFAMILY SSF53335 116 381 4.3E-74 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3982 101e7d3294f75e9002b41c4a847d3f41 418 Gene3D G3DSA:3.40.50.2000 214 398 8.1E-68 T 23-10-2018 DLM_3982 101e7d3294f75e9002b41c4a847d3f41 418 SUPERFAMILY SSF53756 55 415 5.83E-14 T 23-10-2018 DLM_3982 101e7d3294f75e9002b41c4a847d3f41 418 Gene3D G3DSA:3.40.50.11720 34 208 5.7E-47 T 23-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DLM_3982 101e7d3294f75e9002b41c4a847d3f41 418 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 209 1.1E-63 T 23-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DLM_3524 0b3a5a89d123b0dacf345ac83f65f182 461 Pfam PF02321 Outer membrane efflux protein 68 251 9.1E-22 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_3524 0b3a5a89d123b0dacf345ac83f65f182 461 Pfam PF02321 Outer membrane efflux protein 275 458 2.7E-26 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_3524 0b3a5a89d123b0dacf345ac83f65f182 461 Gene3D G3DSA:2.20.200.10 105 349 6.1E-124 T 23-10-2018 DLM_3524 0b3a5a89d123b0dacf345ac83f65f182 461 SUPERFAMILY SSF56954 5 461 1.83E-104 T 23-10-2018 DLM_3524 0b3a5a89d123b0dacf345ac83f65f182 461 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 459 2.5E-123 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_3524 0b3a5a89d123b0dacf345ac83f65f182 461 Gene3D G3DSA:1.20.1600.10 58 461 6.1E-124 T 23-10-2018 DLM_0465 fa142acda384771171154d05e0108d85 285 Gene3D G3DSA:1.10.3210.10 12 283 7.0E-52 T 23-10-2018 DLM_0465 fa142acda384771171154d05e0108d85 285 SUPERFAMILY SSF109604 13 279 3.92E-50 T 23-10-2018 DLM_0465 fa142acda384771171154d05e0108d85 285 Pfam PF08668 HDOD domain 19 209 7.2E-41 T 23-10-2018 IPR013976 Metal-dependent hydrolase HDOD DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 PIRSF PIRSF015589 1 685 1.4E-275 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 679 1.9E-155 T 23-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 685 28.159 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 Gene3D G3DSA:3.30.870.10 504 685 8.9E-68 T 23-10-2018 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 Pfam PF02503 Polyphosphate kinase middle domain 122 325 7.2E-63 T 23-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 SUPERFAMILY SSF143724 111 317 2.35E-66 T 23-10-2018 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 Pfam PF13089 Polyphosphate kinase N-terminal domain 9 113 8.9E-31 T 23-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 8 681 1.2E-292 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 SUPERFAMILY SSF56024 504 683 6.73E-71 T 23-10-2018 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 Gene3D G3DSA:3.30.1840.10 1 316 4.6E-99 T 23-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 SUPERFAMILY SSF56024 318 498 6.91E-59 T 23-10-2018 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 Gene3D G3DSA:3.30.870.10 321 503 1.7E-73 T 23-10-2018 DLM_0231 e9210ac3129d9c7e416a558a76e1de09 685 SUPERFAMILY SSF140356 6 109 2.75E-32 T 23-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 DLM_2802 3b5591663f28b83fb3c8a5f646003c1c 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 243 3.0E-44 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DLM_2802 3b5591663f28b83fb3c8a5f646003c1c 331 Gene3D G3DSA:3.90.25.10 169 312 6.4E-121 T 23-10-2018 DLM_2802 3b5591663f28b83fb3c8a5f646003c1c 331 Gene3D G3DSA:3.40.50.720 4 325 6.4E-121 T 23-10-2018 DLM_2802 3b5591663f28b83fb3c8a5f646003c1c 331 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 330 4.7E-133 T 23-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DLM_2802 3b5591663f28b83fb3c8a5f646003c1c 331 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 331 49.413 T 23-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DLM_2802 3b5591663f28b83fb3c8a5f646003c1c 331 SUPERFAMILY SSF51735 1 330 2.83E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 25.52 T 23-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 77 1.0E-33 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 SUPERFAMILY SSF50249 8 84 6.85E-33 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 23-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 2.1E-13 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 2.1E-13 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 2.1E-13 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 77 4.7E-37 T 23-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 Gene3D G3DSA:2.40.50.140 3 85 1.9E-35 T 23-10-2018 DLM_4400 2d2eebd8a47c845a71f4fe83d66e7069 87 Pfam PF00366 Ribosomal protein S17 12 78 3.5E-34 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_1495 e9dfbb7fdfe1892c9c685675865085c9 127 Pfam PF00581 Rhodanese-like domain 26 114 3.6E-17 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_1495 e9dfbb7fdfe1892c9c685675865085c9 127 Gene3D G3DSA:3.40.250.10 3 122 7.8E-28 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_1495 e9dfbb7fdfe1892c9c685675865085c9 127 SMART SM00450 19 118 7.6E-21 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_1495 e9dfbb7fdfe1892c9c685675865085c9 127 SUPERFAMILY SSF52821 6 121 7.6E-29 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 Pfam PF00664 ABC transporter transmembrane region 24 277 2.3E-14 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 SUPERFAMILY SSF52540 319 551 2.28E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 13 552 1.5E-233 T 23-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 SMART SM00382 353 546 8.1E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 SUPERFAMILY SSF90123 10 308 1.96E-42 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 Gene3D G3DSA:1.20.1560.10 5 311 6.4E-36 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 Pfam PF00005 ABC transporter 344 491 1.6E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_0741 ccd634c221ea3d6dd5f49552ca60dcfa 580 Gene3D G3DSA:3.40.50.300 321 578 7.9E-70 T 23-10-2018 DLM_0948 f135c5b9d9ebb480f3214903f74a2a00 206 Pfam PF01810 LysE type translocator 13 196 1.8E-13 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_4273 2a14849c3316e716c66a60c5e9bb374e 128 Gene3D G3DSA:3.30.420.270 47 120 3.6E-9 T 23-10-2018 DLM_4273 2a14849c3316e716c66a60c5e9bb374e 128 Pfam PF02472 Biopolymer transport protein ExbD/TolR 3 124 1.4E-24 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 SUPERFAMILY SSF46785 6 116 4.33E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 Gene3D G3DSA:3.40.190.290 96 304 3.1E-48 T 23-10-2018 DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.5E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 SUPERFAMILY SSF53850 94 301 5.23E-46 T 23-10-2018 DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 Gene3D G3DSA:1.10.10.10 4 87 5.9E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2387 d2ff4f7064891d8f19cb7a6acee8480c 305 Pfam PF03466 LysR substrate binding domain 92 297 1.5E-45 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2985 d91d16e57bbd52c335c94f95d52e1d6b 311 SUPERFAMILY SSF111331 5 301 1.31E-64 T 23-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DLM_2985 d91d16e57bbd52c335c94f95d52e1d6b 311 SMART SM00046 5 132 7.0E-4 T 23-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DLM_2985 d91d16e57bbd52c335c94f95d52e1d6b 311 Gene3D G3DSA:3.40.50.10330 11 134 2.8E-29 T 23-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DLM_2985 d91d16e57bbd52c335c94f95d52e1d6b 311 Pfam PF00781 Diacylglycerol kinase catalytic domain 24 128 1.3E-23 T 23-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DLM_2985 d91d16e57bbd52c335c94f95d52e1d6b 311 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 29 301 8.6E-40 T 23-10-2018 IPR005218 Diacylglycerol/lipid kinase DLM_2985 d91d16e57bbd52c335c94f95d52e1d6b 311 Gene3D G3DSA:2.60.200.40 135 296 5.1E-37 T 23-10-2018 DLM_0530 c05d743717fc775fdb02e09001a10a18 165 Gene3D G3DSA:1.10.357.10 1 164 2.4E-19 T 23-10-2018 DLM_0530 c05d743717fc775fdb02e09001a10a18 165 SUPERFAMILY SSF48498 51 164 4.45E-12 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_0530 c05d743717fc775fdb02e09001a10a18 165 SUPERFAMILY SSF46689 1 54 5.64E-6 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0067 b83c3536b6535df80b216041338f5f0c 436 TIGRFAM TIGR00836 amt: ammonium transporter 39 433 6.2E-137 T 23-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 DLM_0067 b83c3536b6535df80b216041338f5f0c 436 SUPERFAMILY SSF111352 35 417 6.8E-134 T 23-10-2018 DLM_0067 b83c3536b6535df80b216041338f5f0c 436 ProSitePatterns PS01219 Ammonium transporters signature. 200 225 - T 23-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DLM_0067 b83c3536b6535df80b216041338f5f0c 436 Pfam PF00909 Ammonium Transporter Family 41 434 1.5E-122 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DLM_0067 b83c3536b6535df80b216041338f5f0c 436 Gene3D G3DSA:1.10.3430.10 25 436 3.0E-142 T 23-10-2018 IPR029020 Ammonium/urea transporter DLM_4444 bf12483fa8f3b5515b6c3ecc9ed0e094 266 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 1 254 15.871 T 23-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DLM_4444 bf12483fa8f3b5515b6c3ecc9ed0e094 266 Gene3D G3DSA:3.40.50.150 22 259 2.2E-45 T 23-10-2018 DLM_4444 bf12483fa8f3b5515b6c3ecc9ed0e094 266 SUPERFAMILY SSF53335 32 242 3.38E-43 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_4444 bf12483fa8f3b5515b6c3ecc9ed0e094 266 Pfam PF01564 Spermine/spermidine synthase domain 57 179 5.3E-8 T 23-10-2018 DLM_2024 b6006e4617ffbd6646748f77d6030bf5 265 Gene3D G3DSA:3.40.50.2300 3 137 1.2E-18 T 23-10-2018 DLM_2024 b6006e4617ffbd6646748f77d6030bf5 265 Pfam PF00072 Response regulator receiver domain 146 258 9.2E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2024 b6006e4617ffbd6646748f77d6030bf5 265 Pfam PF00072 Response regulator receiver domain 9 122 3.7E-15 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2024 b6006e4617ffbd6646748f77d6030bf5 265 SUPERFAMILY SSF52172 143 263 1.57E-30 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2024 b6006e4617ffbd6646748f77d6030bf5 265 SUPERFAMILY SSF52172 9 128 9.68E-21 T 23-10-2018 IPR011006 CheY-like superfamily DLM_2024 b6006e4617ffbd6646748f77d6030bf5 265 Gene3D G3DSA:3.40.50.2300 139 265 5.1E-29 T 23-10-2018 DLM_2024 b6006e4617ffbd6646748f77d6030bf5 265 SMART SM00448 144 258 1.1E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_2024 b6006e4617ffbd6646748f77d6030bf5 265 SMART SM00448 7 121 4.7E-11 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1400 639fb1fc2f1718b006c707afa22c6977 147 Gene3D G3DSA:3.10.180.10 1 145 2.5E-15 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_1400 639fb1fc2f1718b006c707afa22c6977 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 128 3.3E-7 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DLM_1400 639fb1fc2f1718b006c707afa22c6977 147 SUPERFAMILY SSF54593 3 132 9.44E-19 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_2911 3c0adcc6301fb0f627e8db11a3c5d457 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 442 596 8.2E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_2911 3c0adcc6301fb0f627e8db11a3c5d457 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 599 5.7E-47 T 23-10-2018 IPR000160 GGDEF domain DLM_2911 3c0adcc6301fb0f627e8db11a3c5d457 606 SUPERFAMILY SSF55073 445 599 1.26E-46 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2911 3c0adcc6301fb0f627e8db11a3c5d457 606 SMART SM00267 433 600 6.1E-50 T 23-10-2018 IPR000160 GGDEF domain DLM_2911 3c0adcc6301fb0f627e8db11a3c5d457 606 Gene3D G3DSA:3.30.70.270 435 604 1.9E-51 T 23-10-2018 DLM_3019 d3317a58e56aa628552d2b8403b1a8ce 301 SUPERFAMILY SSF53850 91 297 6.33E-39 T 23-10-2018 DLM_3019 d3317a58e56aa628552d2b8403b1a8ce 301 Gene3D G3DSA:3.40.190.10 94 291 3.8E-58 T 23-10-2018 DLM_3019 d3317a58e56aa628552d2b8403b1a8ce 301 Pfam PF03466 LysR substrate binding domain 91 293 4.0E-38 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3019 d3317a58e56aa628552d2b8403b1a8ce 301 SUPERFAMILY SSF46785 5 114 1.3E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3019 d3317a58e56aa628552d2b8403b1a8ce 301 Gene3D G3DSA:1.10.10.10 5 93 9.6E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3019 d3317a58e56aa628552d2b8403b1a8ce 301 Gene3D G3DSA:3.40.190.10 166 267 3.8E-58 T 23-10-2018 DLM_3019 d3317a58e56aa628552d2b8403b1a8ce 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.6E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3884 0e0c261904063615c7d3e2175e8ba440 350 SMART SM00342 267 349 1.3E-20 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3884 0e0c261904063615c7d3e2175e8ba440 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 39 221 3.2E-45 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DLM_3884 0e0c261904063615c7d3e2175e8ba440 350 SUPERFAMILY SSF46689 303 350 1.7E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_3884 0e0c261904063615c7d3e2175e8ba440 350 Gene3D G3DSA:1.10.10.60 247 350 3.3E-23 T 23-10-2018 DLM_3884 0e0c261904063615c7d3e2175e8ba440 350 Pfam PF12833 Helix-turn-helix domain 274 350 4.5E-18 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_3990 eceb3e37be6c4bdc5365987dd82d75b8 296 Pfam PF03466 LysR substrate binding domain 82 284 2.4E-48 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_3990 eceb3e37be6c4bdc5365987dd82d75b8 296 Gene3D G3DSA:3.40.190.290 87 285 9.0E-62 T 23-10-2018 DLM_3990 eceb3e37be6c4bdc5365987dd82d75b8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 56 9.1E-14 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_3990 eceb3e37be6c4bdc5365987dd82d75b8 296 SUPERFAMILY SSF46785 2 81 8.71E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3990 eceb3e37be6c4bdc5365987dd82d75b8 296 SUPERFAMILY SSF53850 83 288 3.26E-47 T 23-10-2018 DLM_3990 eceb3e37be6c4bdc5365987dd82d75b8 296 Gene3D G3DSA:1.10.10.10 1 86 1.6E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4467 0736277ace02dbab88c190251177150d 199 Pfam PF02698 DUF218 domain 42 185 1.8E-29 T 23-10-2018 IPR003848 Domain of unknown function DUF218 DLM_0370 52f3186db247a386a4c7872b6c76128d 129 Pfam PF04138 GtrA-like protein 8 122 1.0E-20 T 23-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DLM_3693 105d07af19b0094144f34bc80a7208bc 247 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 87 201 5.3E-11 T 23-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted DLM_3693 105d07af19b0094144f34bc80a7208bc 247 Gene3D G3DSA:3.10.620.30 56 247 1.5E-64 T 23-10-2018 DLM_2789 25ff5145f388ee34e6c7a184be8a8839 288 SUPERFAMILY SSF161098 21 286 8.69E-54 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2789 25ff5145f388ee34e6c7a184be8a8839 288 Gene3D G3DSA:1.10.3720.10 22 284 7.4E-48 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2789 25ff5145f388ee34e6c7a184be8a8839 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 287 9.3E-17 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_2515 d5b8ff6ffc53269857d909d75c8a5cef 150 Gene3D G3DSA:2.70.40.10 2 149 1.7E-50 T 23-10-2018 IPR036157 dUTPase-like superfamily DLM_2515 d5b8ff6ffc53269857d909d75c8a5cef 150 SUPERFAMILY SSF51283 4 149 1.7E-50 T 23-10-2018 IPR036157 dUTPase-like superfamily DLM_2515 d5b8ff6ffc53269857d909d75c8a5cef 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 15 149 4.2E-47 T 23-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DLM_2515 d5b8ff6ffc53269857d909d75c8a5cef 150 Pfam PF00692 dUTPase 17 148 3.8E-38 T 23-10-2018 IPR029054 dUTPase-like DLM_2515 d5b8ff6ffc53269857d909d75c8a5cef 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 149 32.72 T 23-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DLM_3860 416df2af5827142e440e37fe0bd99d92 354 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 336 4.3E-34 T 23-10-2018 IPR000160 GGDEF domain DLM_3860 416df2af5827142e440e37fe0bd99d92 354 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 334 9.3E-35 T 23-10-2018 IPR000160 GGDEF domain DLM_3860 416df2af5827142e440e37fe0bd99d92 354 SMART SM00267 178 339 6.6E-45 T 23-10-2018 IPR000160 GGDEF domain DLM_3860 416df2af5827142e440e37fe0bd99d92 354 Gene3D G3DSA:3.30.70.270 181 339 2.9E-43 T 23-10-2018 DLM_3860 416df2af5827142e440e37fe0bd99d92 354 SUPERFAMILY SSF55073 194 338 1.73E-35 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_2593 07d689dc098acfcaa2658aa2dcb5cf26 152 Pfam PF02631 RecX family 33 140 1.0E-29 T 23-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DLM_2593 07d689dc098acfcaa2658aa2dcb5cf26 152 Gene3D G3DSA:1.10.10.10 4 50 4.0E-7 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2593 07d689dc098acfcaa2658aa2dcb5cf26 152 Gene3D G3DSA:1.10.10.10 95 141 4.5E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2593 07d689dc098acfcaa2658aa2dcb5cf26 152 Hamap MF_01114 Regulatory protein RecX [recX]. 2 145 13.853 T 23-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DLM_2593 07d689dc098acfcaa2658aa2dcb5cf26 152 Gene3D G3DSA:1.10.10.10 52 94 1.5E-10 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3102 18184c4e2d87daaf05a1cf3fac4ebc13 388 Pfam PF11306 Protein of unknown function (DUF3108) 147 357 1.0E-15 T 23-10-2018 IPR021457 Protein of unknown function DUF3108 DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 Gene3D G3DSA:3.40.980.10 168 320 1.6E-127 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 SUPERFAMILY SSF63882 1 168 1.11E-55 T 23-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 SUPERFAMILY SSF53218 170 314 1.83E-40 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 Gene3D G3DSA:2.40.340.10 321 388 1.6E-127 T 23-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 SMART SM00852 173 310 9.8E-40 T 23-10-2018 IPR001453 MoaB/Mog domain DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 170 306 8.0E-26 T 23-10-2018 IPR001453 MoaB/Mog domain DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 SUPERFAMILY SSF63867 334 395 3.53E-11 T 23-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 Pfam PF03454 MoeA C-terminal region (domain IV) 335 388 3.6E-12 T 23-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 Pfam PF00994 Probable molybdopterin binding domain 173 309 1.0E-23 T 23-10-2018 IPR001453 MoaB/Mog domain DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 Gene3D G3DSA:3.90.105.10 21 167 1.6E-127 T 23-10-2018 DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 Gene3D G3DSA:2.170.190.11 45 134 1.6E-127 T 23-10-2018 DLM_1957 0449f7737cd58aea74f53167082ba3d7 397 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 160 7.0E-48 T 23-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DLM_0597 60dbae0e914d62ae8b28f4a117ccee36 110 Pfam PF04972 BON domain 68 109 2.2E-6 T 23-10-2018 IPR007055 BON domain DLM_1327 261f083735183932f924451ed6dc6e17 102 SUPERFAMILY SSF54913 1 100 1.78E-21 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DLM_1327 261f083735183932f924451ed6dc6e17 102 Pfam PF02641 Uncharacterized ACR, COG1993 6 87 8.5E-12 T 23-10-2018 IPR003793 Domain of unknown function DUF190 DLM_1327 261f083735183932f924451ed6dc6e17 102 Gene3D G3DSA:3.30.70.120 1 99 3.1E-14 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DLM_1307 b54cf37ca14e97d5da0fabddf604e735 540 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 45 214 6.2E-13 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_1307 b54cf37ca14e97d5da0fabddf604e735 540 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 225 343 3.4E-16 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_3755 442ba91a7d97ecf5e9bddaf5a8e2a750 290 SUPERFAMILY SSF103481 186 289 4.18E-16 T 23-10-2018 DLM_3755 442ba91a7d97ecf5e9bddaf5a8e2a750 290 Pfam PF00892 EamA-like transporter family 153 287 4.5E-21 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3755 442ba91a7d97ecf5e9bddaf5a8e2a750 290 Pfam PF00892 EamA-like transporter family 16 143 5.7E-23 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3755 442ba91a7d97ecf5e9bddaf5a8e2a750 290 SUPERFAMILY SSF103481 45 147 4.18E-16 T 23-10-2018 DLM_0112 8cb90d3ad6e524a62fbcd5c8dd0e2414 226 SUPERFAMILY SSF53335 6 225 5.73E-42 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0112 8cb90d3ad6e524a62fbcd5c8dd0e2414 226 Pfam PF02390 Putative methyltransferase 53 220 3.5E-56 T 23-10-2018 DLM_0112 8cb90d3ad6e524a62fbcd5c8dd0e2414 226 Gene3D G3DSA:3.40.50.150 20 226 7.6E-67 T 23-10-2018 DLM_0112 8cb90d3ad6e524a62fbcd5c8dd0e2414 226 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 14 226 29.803 T 23-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DLM_0112 8cb90d3ad6e524a62fbcd5c8dd0e2414 226 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 44 225 7.8E-55 T 23-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DLM_0032 816ee76e3df88f2c3e96a02791885b5f 310 Pfam PF13737 Transposase DDE domain 22 130 6.1E-43 T 23-10-2018 IPR025668 Transposase DDE domain DLM_2080 47d3c4932997b57f1f17f2fc93e71d23 663 Gene3D G3DSA:2.60.40.10 192 265 1.2E-6 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_4402 5a14b81f02ae84dbb5fcfbf6fa319466 103 SUPERFAMILY SSF50193 1 102 6.15E-41 T 23-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4402 5a14b81f02ae84dbb5fcfbf6fa319466 103 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 103 6.3E-47 T 23-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DLM_4402 5a14b81f02ae84dbb5fcfbf6fa319466 103 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 103 17.601 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DLM_4402 5a14b81f02ae84dbb5fcfbf6fa319466 103 ProSitePatterns PS00049 Ribosomal protein L14 signature. 41 67 - T 23-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4402 5a14b81f02ae84dbb5fcfbf6fa319466 103 Pfam PF00238 Ribosomal protein L14p/L23e 1 103 9.7E-44 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DLM_4402 5a14b81f02ae84dbb5fcfbf6fa319466 103 Gene3D G3DSA:2.40.150.20 1 103 1.3E-43 T 23-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4402 5a14b81f02ae84dbb5fcfbf6fa319466 103 SMART SM01374 1 103 6.0E-63 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DLM_0299 7b3fc3f7a3e6fe14ce3cb42a732e9ce1 210 SUPERFAMILY SSF46785 9 84 3.98E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0299 7b3fc3f7a3e6fe14ce3cb42a732e9ce1 210 Pfam PF04079 Segregation and condensation complex subunit ScpB 14 171 2.1E-49 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DLM_0299 7b3fc3f7a3e6fe14ce3cb42a732e9ce1 210 PIRSF PIRSF019345 3 207 8.3E-55 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DLM_0299 7b3fc3f7a3e6fe14ce3cb42a732e9ce1 210 Gene3D G3DSA:1.10.10.10 5 84 9.6E-12 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0299 7b3fc3f7a3e6fe14ce3cb42a732e9ce1 210 Gene3D G3DSA:1.10.10.10 85 178 4.0E-33 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0299 7b3fc3f7a3e6fe14ce3cb42a732e9ce1 210 SUPERFAMILY SSF46785 87 161 1.25E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0299 7b3fc3f7a3e6fe14ce3cb42a732e9ce1 210 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 10 173 2.4E-34 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DLM_4556 7008ca33fc228b1990821c8f30b9261a 185 Gene3D G3DSA:2.60.120.10 5 185 3.8E-52 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_4556 7008ca33fc228b1990821c8f30b9261a 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 10 175 5.4E-49 T 23-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DLM_4556 7008ca33fc228b1990821c8f30b9261a 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 173 3.0E-43 T 23-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DLM_4556 7008ca33fc228b1990821c8f30b9261a 185 SUPERFAMILY SSF51182 6 179 1.4E-52 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_3221 f51b52bd4cb9ead7233e0e17832f7b06 127 Pfam PF01592 NifU-like N terminal domain 2 125 7.1E-56 T 23-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DLM_3221 f51b52bd4cb9ead7233e0e17832f7b06 127 Gene3D G3DSA:3.90.1010.10 1 127 2.8E-58 T 23-10-2018 DLM_3221 f51b52bd4cb9ead7233e0e17832f7b06 127 SUPERFAMILY SSF82649 1 125 6.54E-49 T 23-10-2018 DLM_3221 f51b52bd4cb9ead7233e0e17832f7b06 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.8E-69 T 23-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DLM_0698 d2fd1552e5239fee5772962e6df8641b 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DLM_0698 d2fd1552e5239fee5772962e6df8641b 265 Gene3D G3DSA:3.90.226.10 3 204 2.6E-65 T 23-10-2018 DLM_0698 d2fd1552e5239fee5772962e6df8641b 265 Gene3D G3DSA:1.10.12.10 205 265 6.9E-17 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DLM_0698 d2fd1552e5239fee5772962e6df8641b 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 263 2.9E-55 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_0698 d2fd1552e5239fee5772962e6df8641b 265 SUPERFAMILY SSF52096 2 263 1.72E-74 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_0930 412196361f7f50e67018022ea413e6c2 167 SUPERFAMILY SSF53098 4 138 4.93E-26 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0930 412196361f7f50e67018022ea413e6c2 167 Gene3D G3DSA:3.30.420.10 1 141 2.7E-19 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_0930 412196361f7f50e67018022ea413e6c2 167 Pfam PF00665 Integrase core domain 11 92 1.1E-16 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_1284 a9cb3a624dd57c5e9225b97ae198b668 126 Gene3D G3DSA:1.10.260.40 4 75 2.7E-6 T 23-10-2018 DLM_1284 a9cb3a624dd57c5e9225b97ae198b668 126 SUPERFAMILY SSF47413 11 65 1.19E-5 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_2892 b21f44abf59505929987c212567e0bf8 359 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 142 268 5.0E-28 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2892 b21f44abf59505929987c212567e0bf8 359 SUPERFAMILY SSF58104 62 304 1.57E-38 T 23-10-2018 DLM_2892 b21f44abf59505929987c212567e0bf8 359 SMART SM00283 57 308 3.1E-6 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2892 b21f44abf59505929987c212567e0bf8 359 Gene3D G3DSA:1.10.287.950 43 343 2.2E-38 T 23-10-2018 DLM_2892 b21f44abf59505929987c212567e0bf8 359 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 220 2.1E-17 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2892 b21f44abf59505929987c212567e0bf8 359 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 162 189 2.1E-17 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2892 b21f44abf59505929987c212567e0bf8 359 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 21 2.1E-17 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1008 6643395c1658827693b8f367d2e5575a 299 Gene3D G3DSA:1.10.10.10 1 85 3.5E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1008 6643395c1658827693b8f367d2e5575a 299 Gene3D G3DSA:3.40.190.290 90 294 4.3E-44 T 23-10-2018 DLM_1008 6643395c1658827693b8f367d2e5575a 299 SUPERFAMILY SSF53850 86 292 2.17E-41 T 23-10-2018 DLM_1008 6643395c1658827693b8f367d2e5575a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.6E-23 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1008 6643395c1658827693b8f367d2e5575a 299 SUPERFAMILY SSF46785 1 111 8.28E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1008 6643395c1658827693b8f367d2e5575a 299 Pfam PF03466 LysR substrate binding domain 87 287 4.0E-42 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1008 6643395c1658827693b8f367d2e5575a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.1E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1008 6643395c1658827693b8f367d2e5575a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.1E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1008 6643395c1658827693b8f367d2e5575a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.1E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_0391 a5ff3cc43e01ce7701bad7ca1b19e5d4 214 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 31 212 3.4E-49 T 23-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like DLM_0391 a5ff3cc43e01ce7701bad7ca1b19e5d4 214 Gene3D G3DSA:2.60.120.590 14 214 1.3E-56 T 23-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily DLM_0391 a5ff3cc43e01ce7701bad7ca1b19e5d4 214 SUPERFAMILY SSF51197 17 213 1.13E-55 T 23-10-2018 DLM_3811 a6474685d866114d172e0d7727c90387 297 Pfam PF06912 Protein of unknown function (DUF1275) 65 272 2.0E-29 T 23-10-2018 IPR010699 Protein of unknown function DUF1275 DLM_2292 44cc70f2ee5cd41f626c5c611b35706c 183 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 178 4.0E-54 T 23-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DLM_2292 44cc70f2ee5cd41f626c5c611b35706c 183 SUPERFAMILY SSF89028 7 178 1.08E-58 T 23-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DLM_2292 44cc70f2ee5cd41f626c5c611b35706c 183 Pfam PF01923 Cobalamin adenosyltransferase 8 165 4.3E-55 T 23-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DLM_2292 44cc70f2ee5cd41f626c5c611b35706c 183 Gene3D G3DSA:1.20.1200.10 17 183 2.1E-60 T 23-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DLM_2292 44cc70f2ee5cd41f626c5c611b35706c 183 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 2.5E-56 T 23-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DLM_1679 91c509b7453e090139e13812c558dedc 176 Pfam PF12915 Protein of unknown function (DUF3833) 14 175 3.3E-66 T 23-10-2018 IPR024409 Protein of unknown function DUF3833 DLM_2910 a1f6e1404fbb4d19dcfa92545238fdf7 96 Pfam PF04977 Septum formation initiator 11 89 9.7E-27 T 23-10-2018 IPR007060 Septum formation initiator FtsL/DivIC DLM_2910 a1f6e1404fbb4d19dcfa92545238fdf7 96 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.991 T 23-10-2018 IPR023081 Cell division protein FtsB DLM_2011 24d4d6e40df4fd0b500a4c1c44fec52e 303 Gene3D G3DSA:2.40.30.170 36 290 8.8E-46 T 23-10-2018 DLM_2011 24d4d6e40df4fd0b500a4c1c44fec52e 303 Gene3D G3DSA:1.10.287.470 79 170 8.8E-46 T 23-10-2018 DLM_2011 24d4d6e40df4fd0b500a4c1c44fec52e 303 Gene3D G3DSA:2.40.50.100 45 205 8.8E-46 T 23-10-2018 DLM_2011 24d4d6e40df4fd0b500a4c1c44fec52e 303 SUPERFAMILY SSF111369 46 290 1.44E-15 T 23-10-2018 DLM_2011 24d4d6e40df4fd0b500a4c1c44fec52e 303 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 249 9.0E-31 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_2011 24d4d6e40df4fd0b500a4c1c44fec52e 303 Pfam PF00529 HlyD membrane-fusion protein of T1SS 9 263 3.8E-7 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DLM_2011 24d4d6e40df4fd0b500a4c1c44fec52e 303 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 248 1.4E-21 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_4288 1596f74feab8739c369b2ffb0a81da08 190 Gene3D G3DSA:3.40.50.1950 8 190 1.3E-32 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DLM_4288 1596f74feab8739c369b2ffb0a81da08 190 SUPERFAMILY SSF52507 9 171 7.85E-33 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DLM_4288 1596f74feab8739c369b2ffb0a81da08 190 Pfam PF02441 Flavoprotein 12 185 2.1E-25 T 23-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DLM_0493 8da619f12145eb178bf40316e55c58f9 189 Pfam PF00692 dUTPase 70 165 5.4E-6 T 23-10-2018 IPR029054 dUTPase-like DLM_0493 8da619f12145eb178bf40316e55c58f9 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 27.61 T 23-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 DLM_0493 8da619f12145eb178bf40316e55c58f9 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 188 2.5E-46 T 23-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 DLM_0493 8da619f12145eb178bf40316e55c58f9 189 Gene3D G3DSA:2.70.40.10 1 161 9.2E-52 T 23-10-2018 IPR036157 dUTPase-like superfamily DLM_0493 8da619f12145eb178bf40316e55c58f9 189 SUPERFAMILY SSF51283 3 188 4.58E-49 T 23-10-2018 IPR036157 dUTPase-like superfamily DLM_3488 c584bcf638484a46f3f9aeb20ec92223 391 SUPERFAMILY SSF103473 4 384 3.01E-55 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3488 c584bcf638484a46f3f9aeb20ec92223 391 Gene3D G3DSA:1.20.1250.20 1 385 4.3E-52 T 23-10-2018 DLM_3488 c584bcf638484a46f3f9aeb20ec92223 391 Pfam PF07690 Major Facilitator Superfamily 15 330 2.6E-25 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2853 200b539376e7e711f374ddbeb6fdc996 271 Gene3D G3DSA:3.20.10.10 113 270 1.4E-50 T 23-10-2018 DLM_2853 200b539376e7e711f374ddbeb6fdc996 271 Gene3D G3DSA:3.30.470.10 2 109 7.8E-27 T 23-10-2018 DLM_2853 200b539376e7e711f374ddbeb6fdc996 271 Pfam PF01063 Amino-transferase class IV 25 248 1.8E-36 T 23-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DLM_2853 200b539376e7e711f374ddbeb6fdc996 271 SUPERFAMILY SSF56752 4 255 2.22E-63 T 23-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DLM_2853 200b539376e7e711f374ddbeb6fdc996 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 258 1.9E-78 T 23-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 DLM_2853 200b539376e7e711f374ddbeb6fdc996 271 ProSitePatterns PS00770 Aminotransferases class-IV signature. 174 203 - T 23-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DLM_0998 f2e2b536faf3fad84c79bea365ff0ebf 336 Pfam PF03741 Integral membrane protein TerC family 82 288 3.1E-56 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DLM_0998 f2e2b536faf3fad84c79bea365ff0ebf 336 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 17 328 3.1E-121 T 23-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 DLM_3262 901077a7a43782c3f3fa6491bff8561f 323 SUPERFAMILY SSF51556 9 321 3.48E-88 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_3262 901077a7a43782c3f3fa6491bff8561f 323 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 4 318 1.2E-96 T 23-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 DLM_3262 901077a7a43782c3f3fa6491bff8561f 323 Gene3D G3DSA:3.20.20.140 1 323 4.7E-127 T 23-10-2018 DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 23-10-2018 IPR018120 Glycoside hydrolase family 1, active site DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 23-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 Pfam PF00232 Glycosyl hydrolase family 1 2 459 1.6E-150 T 23-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 SUPERFAMILY SSF51445 2 455 6.35E-159 T 23-10-2018 IPR017853 Glycoside hydrolase superfamily DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 Gene3D G3DSA:3.20.20.80 1 462 2.0E-150 T 23-10-2018 DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 389 3.3E-16 T 23-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 416 3.3E-16 T 23-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 436 3.3E-16 T 23-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 3.3E-16 T 23-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DLM_3116 6fe1dd530e8591eec0737a6629b039af 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 3.3E-16 T 23-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DLM_2957 dc792753be4e63e7d5eb2666b3c0512f 117 Pfam PF05899 Protein of unknown function (DUF861) 48 115 3.4E-12 T 23-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 DLM_2957 dc792753be4e63e7d5eb2666b3c0512f 117 SUPERFAMILY SSF51182 45 116 1.51E-9 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2957 dc792753be4e63e7d5eb2666b3c0512f 117 Gene3D G3DSA:2.60.120.10 10 117 1.5E-23 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2051 21c183b32becdbb8500f86e2bd2d30a3 441 Gene3D G3DSA:1.20.1250.20 20 431 1.5E-63 T 23-10-2018 DLM_2051 21c183b32becdbb8500f86e2bd2d30a3 441 SUPERFAMILY SSF103473 11 435 1.44E-75 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2051 21c183b32becdbb8500f86e2bd2d30a3 441 Pfam PF07690 Major Facilitator Superfamily 30 285 2.3E-32 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2051 21c183b32becdbb8500f86e2bd2d30a3 441 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DLM_2460 3f2e62a6006a1c420c3512698219c9a7 779 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 734 777 2.2E-17 T 23-10-2018 IPR020011 Motility protein FimV, C-terminal DLM_2460 3f2e62a6006a1c420c3512698219c9a7 779 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 179 241 1.6E-17 T 23-10-2018 IPR020012 Motility protein FimV, N-terminal DLM_2460 3f2e62a6006a1c420c3512698219c9a7 779 Gene3D G3DSA:1.20.58.2200 720 778 2.4E-15 T 23-10-2018 IPR038440 FimV, C-terminal domain superfamily DLM_0614 a86434fc5836814984745e1303be80fb 126 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 125 2.6E-23 T 23-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 DLM_0614 a86434fc5836814984745e1303be80fb 126 SUPERFAMILY SSF55331 2 126 5.98E-42 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily DLM_0614 a86434fc5836814984745e1303be80fb 126 Gene3D G3DSA:3.30.429.10 2 126 6.9E-48 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily DLM_2821 aa328decbecd60950a26d1e7581403bd 457 Gene3D G3DSA:1.20.1250.20 19 215 2.4E-12 T 23-10-2018 DLM_2821 aa328decbecd60950a26d1e7581403bd 457 Gene3D G3DSA:1.20.1250.20 222 433 2.9E-14 T 23-10-2018 DLM_2821 aa328decbecd60950a26d1e7581403bd 457 SUPERFAMILY SSF103473 20 428 7.59E-35 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2821 aa328decbecd60950a26d1e7581403bd 457 Pfam PF13347 MFS/sugar transport protein 20 433 1.8E-91 T 23-10-2018 DLM_2821 aa328decbecd60950a26d1e7581403bd 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 445 8.0E-105 T 23-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 DLM_3859 14daf969987ac0270bd4a5c0f45347dd 71 Gene3D G3DSA:1.20.58.660 1 71 4.9E-27 T 23-10-2018 DLM_3859 14daf969987ac0270bd4a5c0f45347dd 71 Pfam PF04325 Protein of unknown function (DUF465) 19 66 1.5E-16 T 23-10-2018 IPR007420 Protein of unknown function DUF465 DLM_2351 64f16ea625dbae74fc482b7f28d36cff 147 Pfam PF13994 PgaD-like protein 8 140 2.5E-23 T 23-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 DLM_2351 64f16ea625dbae74fc482b7f28d36cff 147 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 7 144 5.9E-25 T 23-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 DLM_2666 844ed54ebe71dc0d32a0a52aa38081ef 188 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 8 187 2.3E-39 T 23-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 DLM_1303 313d665f47c5b8ce18788a323b132f49 287 Pfam PF13503 Domain of unknown function (DUF4123) 26 143 1.9E-15 T 23-10-2018 IPR025391 Domain of unknown function DUF4123 DLM_1576 36e9730d7c821217d928c11784195168 87 Pfam PF05488 PAAR motif 8 79 6.3E-24 T 23-10-2018 IPR008727 PAAR motif DLM_1576 36e9730d7c821217d928c11784195168 87 Gene3D G3DSA:2.60.200.60 16 85 9.6E-11 T 23-10-2018 DLM_0072 c0ba4475153f8eb181f8cfc6e6f0443c 212 Gene3D G3DSA:3.40.30.10 24 211 3.3E-45 T 23-10-2018 DLM_0072 c0ba4475153f8eb181f8cfc6e6f0443c 212 SUPERFAMILY SSF52833 29 202 3.13E-34 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_0072 c0ba4475153f8eb181f8cfc6e6f0443c 212 PIRSF PIRSF001488 8 209 4.4E-39 T 23-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DLM_0072 c0ba4475153f8eb181f8cfc6e6f0443c 212 Pfam PF01323 DSBA-like thioredoxin domain 91 191 4.1E-12 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DLM_0164 48bac9cc33a83a058dd10f0aa740d455 379 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 3 39 4.6E-16 T 23-10-2018 IPR011723 Zinc finger/thioredoxin putative DLM_0164 48bac9cc33a83a058dd10f0aa740d455 379 Pfam PF13719 zinc-ribbon domain 5 39 4.4E-12 T 23-10-2018 IPR011723 Zinc finger/thioredoxin putative DLM_0164 48bac9cc33a83a058dd10f0aa740d455 379 Pfam PF11906 Protein of unknown function (DUF3426) 231 375 4.1E-40 T 23-10-2018 IPR021834 Protein of unknown function DUF3426 DLM_1998 81ffdd6deec588f1851a5a6587040412 171 PIRSF PIRSF006162 14 171 7.4E-46 T 23-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DLM_1998 81ffdd6deec588f1851a5a6587040412 171 SUPERFAMILY SSF101307 17 167 3.01E-42 T 23-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 DLM_1998 81ffdd6deec588f1851a5a6587040412 171 Pfam PF04608 Phosphatidylglycerophosphatase A 23 165 3.5E-51 T 23-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DLM_3318 a265a3e32f4de862fef096f8a8500347 315 Pfam PF01882 Protein of unknown function DUF58 208 287 7.9E-9 T 23-10-2018 IPR002881 Domain of unknown function DUF58 DLM_1778 8b53a3a50190fdd79abf90c6544d3f79 174 SUPERFAMILY SSF53955 35 154 2.11E-33 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily DLM_1778 8b53a3a50190fdd79abf90c6544d3f79 174 Pfam PF01464 Transglycosylase SLT domain 38 144 7.0E-22 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 DLM_1778 8b53a3a50190fdd79abf90c6544d3f79 174 Gene3D G3DSA:1.10.530.10 31 170 4.3E-31 T 23-10-2018 DLM_4136 dfb7fffae65e7c7c7d2e370f144bb6d1 272 Gene3D G3DSA:1.10.3210.10 6 266 5.6E-65 T 23-10-2018 DLM_4136 dfb7fffae65e7c7c7d2e370f144bb6d1 272 Pfam PF08668 HDOD domain 14 204 1.1E-53 T 23-10-2018 IPR013976 Metal-dependent hydrolase HDOD DLM_4136 dfb7fffae65e7c7c7d2e370f144bb6d1 272 SUPERFAMILY SSF109604 11 266 3.35E-60 T 23-10-2018 DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 SUPERFAMILY SSF51905 3 222 4.24E-37 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.0E-5 T 23-10-2018 DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.0E-5 T 23-10-2018 DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 SUPERFAMILY SSF51971 169 407 2.35E-5 T 23-10-2018 DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 Gene3D G3DSA:3.50.50.60 298 415 6.3E-12 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 Gene3D G3DSA:3.50.50.60 2 279 1.2E-56 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 9 196 3.2E-26 T 23-10-2018 DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.4E-8 T 23-10-2018 DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 5.4E-8 T 23-10-2018 DLM_2207 cc1bf6be5d41d8cb7587030c5694b942 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 128 137 5.4E-8 T 23-10-2018 DLM_1226 2cb2bb462dcc7f28c978f091ae9a15fd 143 Pfam PF02566 OsmC-like protein 40 140 1.5E-15 T 23-10-2018 IPR003718 OsmC/Ohr family DLM_1226 2cb2bb462dcc7f28c978f091ae9a15fd 143 Gene3D G3DSA:2.20.25.10 1 44 9.0E-15 T 23-10-2018 DLM_1226 2cb2bb462dcc7f28c978f091ae9a15fd 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 6 142 6.6E-51 T 23-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DLM_1226 2cb2bb462dcc7f28c978f091ae9a15fd 143 SUPERFAMILY SSF82784 5 142 1.57E-36 T 23-10-2018 IPR036102 OsmC/Ohr superfamily DLM_1226 2cb2bb462dcc7f28c978f091ae9a15fd 143 Gene3D G3DSA:3.30.300.20 46 143 1.1E-29 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_2364 841cbd79058cfddc997731cf5a6ae637 375 Gene3D G3DSA:2.60.40.3120 1 112 2.2E-42 T 23-10-2018 DLM_2364 841cbd79058cfddc997731cf5a6ae637 375 SMART SM00631 105 333 4.8E-4 T 23-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DLM_2364 841cbd79058cfddc997731cf5a6ae637 375 Pfam PF00246 Zinc carboxypeptidase 124 341 2.3E-21 T 23-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DLM_2364 841cbd79058cfddc997731cf5a6ae637 375 SUPERFAMILY SSF53187 106 373 1.55E-57 T 23-10-2018 DLM_2364 841cbd79058cfddc997731cf5a6ae637 375 Gene3D G3DSA:3.40.630.10 113 375 1.8E-67 T 23-10-2018 DLM_4278 4129f7b7e3950392607d702123187dc2 282 Pfam PF02517 CAAX protease self-immunity 180 270 2.0E-16 T 23-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DLM_1248 12b9a153eeae1f94ceb54ef5df88fbbc 189 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 9 186 5.7E-34 T 23-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 DLM_0045 ffcc8e8f9da9efe2068b736becbcd986 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 308 4.1E-15 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0045 ffcc8e8f9da9efe2068b736becbcd986 320 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 1.2E-93 T 23-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 DLM_0045 ffcc8e8f9da9efe2068b736becbcd986 320 SUPERFAMILY SSF161098 28 304 1.5E-32 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0045 ffcc8e8f9da9efe2068b736becbcd986 320 Gene3D G3DSA:1.10.3720.10 71 316 3.2E-31 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0484 c2fc3bf87535db355a0b6f6eb1d66f3b 398 Gene3D G3DSA:3.90.1150.10 5 392 3.0E-156 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0484 c2fc3bf87535db355a0b6f6eb1d66f3b 398 Gene3D G3DSA:3.40.640.10 60 300 3.0E-156 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0484 c2fc3bf87535db355a0b6f6eb1d66f3b 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 6.2E-37 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DLM_0484 c2fc3bf87535db355a0b6f6eb1d66f3b 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 6.2E-37 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DLM_0484 c2fc3bf87535db355a0b6f6eb1d66f3b 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 6.2E-37 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DLM_0484 c2fc3bf87535db355a0b6f6eb1d66f3b 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 6.2E-37 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DLM_0484 c2fc3bf87535db355a0b6f6eb1d66f3b 398 Pfam PF00155 Aminotransferase class I and II 27 391 2.1E-79 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DLM_0484 c2fc3bf87535db355a0b6f6eb1d66f3b 398 SUPERFAMILY SSF53383 1 397 2.26E-117 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0525 4e1f1b4efe3f323a2f6a76e982570a58 329 SUPERFAMILY SSF53474 54 324 2.24E-50 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0525 4e1f1b4efe3f323a2f6a76e982570a58 329 Pfam PF12697 Alpha/beta hydrolase family 76 313 2.8E-16 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_0525 4e1f1b4efe3f323a2f6a76e982570a58 329 Gene3D G3DSA:3.40.50.1820 41 324 2.8E-57 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4162 df4e6e351482fa738b6e55842e84c884 154 PIRSF PIRSF029256 1 154 2.0E-66 T 23-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DLM_4162 df4e6e351482fa738b6e55842e84c884 154 SUPERFAMILY SSF75217 1 151 5.95E-46 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases DLM_4162 df4e6e351482fa738b6e55842e84c884 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.19 T 23-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DLM_4162 df4e6e351482fa738b6e55842e84c884 154 Gene3D G3DSA:3.40.1280.10 1 154 1.0E-65 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DLM_4162 df4e6e351482fa738b6e55842e84c884 154 Pfam PF00588 SpoU rRNA Methylase family 2 141 5.9E-35 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DLM_4162 df4e6e351482fa738b6e55842e84c884 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 151 1.9E-57 T 23-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DLM_1265 31024f5a68773d7b7d96ed729cc5ed32 301 Pfam PF10124 Mu-like prophage major head subunit gpT 233 298 3.9E-24 T 23-10-2018 IPR018774 Bacteriophage Mu, GpT DLM_1265 31024f5a68773d7b7d96ed729cc5ed32 301 Pfam PF10124 Mu-like prophage major head subunit gpT 164 231 2.1E-15 T 23-10-2018 IPR018774 Bacteriophage Mu, GpT DLM_1265 31024f5a68773d7b7d96ed729cc5ed32 301 Pfam PF10124 Mu-like prophage major head subunit gpT 8 151 1.8E-57 T 23-10-2018 IPR018774 Bacteriophage Mu, GpT DLM_1207 0f247425080b7b628732aa7bd656f123 479 Gene3D G3DSA:3.40.309.10 256 445 3.1E-159 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_1207 0f247425080b7b628732aa7bd656f123 479 SUPERFAMILY SSF53720 5 477 4.19E-153 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_1207 0f247425080b7b628732aa7bd656f123 479 Pfam PF00171 Aldehyde dehydrogenase family 22 476 8.9E-155 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_1207 0f247425080b7b628732aa7bd656f123 479 Gene3D G3DSA:3.40.605.10 27 474 3.1E-159 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0117 662204ba1a815cef6ee9800641847aea 479 PIRSF PIRSF006060 3 470 4.2E-43 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_0117 662204ba1a815cef6ee9800641847aea 479 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 14 479 5.6E-208 T 23-10-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 DLM_0117 662204ba1a815cef6ee9800641847aea 479 Pfam PF13520 Amino acid permease 17 421 8.9E-74 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_0117 662204ba1a815cef6ee9800641847aea 479 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 12 479 1.7E-182 T 23-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 DLM_0117 662204ba1a815cef6ee9800641847aea 479 Gene3D G3DSA:1.20.1740.10 12 470 6.1E-55 T 23-10-2018 DLM_2964 4b0b67c9329169bc72cb7b99d517d6e8 258 Gene3D G3DSA:3.40.50.1980 15 129 6.4E-27 T 23-10-2018 DLM_2964 4b0b67c9329169bc72cb7b99d517d6e8 258 SUPERFAMILY SSF53807 16 255 2.16E-38 T 23-10-2018 DLM_2964 4b0b67c9329169bc72cb7b99d517d6e8 258 Gene3D G3DSA:3.40.50.1980 130 258 3.5E-27 T 23-10-2018 DLM_2964 4b0b67c9329169bc72cb7b99d517d6e8 258 Pfam PF01497 Periplasmic binding protein 18 236 3.2E-28 T 23-10-2018 IPR002491 ABC transporter periplasmic binding domain DLM_0192 16d8b249b9c8c5dd02d333ddd6e4dea8 188 Gene3D G3DSA:3.40.50.10420 29 188 3.3E-23 T 23-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DLM_0192 16d8b249b9c8c5dd02d333ddd6e4dea8 188 Pfam PF02589 LUD domain 92 188 1.9E-14 T 23-10-2018 IPR003741 LUD domain DLM_0192 16d8b249b9c8c5dd02d333ddd6e4dea8 188 SUPERFAMILY SSF100950 30 188 2.85E-27 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_1306 5fc7d1ef7bded04270ed2aacc2bb3191 51 Pfam PF11745 Protein of unknown function (DUF3304) 1 26 1.6E-5 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_2557 a1d51b68336f7a2da56c6d0c5592f21e 263 Pfam PF02698 DUF218 domain 85 245 1.4E-24 T 23-10-2018 IPR003848 Domain of unknown function DUF218 DLM_2464 22271d2a564ea31b3dac647be58dac9f 253 Gene3D G3DSA:3.40.50.150 25 249 1.7E-56 T 23-10-2018 DLM_2464 22271d2a564ea31b3dac647be58dac9f 253 Pfam PF08241 Methyltransferase domain 49 145 1.8E-26 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DLM_2464 22271d2a564ea31b3dac647be58dac9f 253 SUPERFAMILY SSF53335 10 244 2.15E-48 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3847 139b2f7fd6fd3bccca182b7a08ae462c 181 Gene3D G3DSA:3.10.640.10 1 181 2.8E-76 T 23-10-2018 IPR038590 YaeQ superfamily DLM_3847 139b2f7fd6fd3bccca182b7a08ae462c 181 SMART SM01322 1 176 3.2E-116 T 23-10-2018 IPR009822 YaeQ DLM_3847 139b2f7fd6fd3bccca182b7a08ae462c 181 Pfam PF07152 YaeQ protein 1 173 1.0E-75 T 23-10-2018 IPR009822 YaeQ DLM_3847 139b2f7fd6fd3bccca182b7a08ae462c 181 SUPERFAMILY SSF52980 2 178 9.38E-72 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DLM_3847 139b2f7fd6fd3bccca182b7a08ae462c 181 PIRSF PIRSF011484 1 180 4.5E-72 T 23-10-2018 IPR009822 YaeQ DLM_2573 c5de76557e780dfcfc0f1225dc8dcfce 142 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 142 21.592 T 23-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DLM_2573 c5de76557e780dfcfc0f1225dc8dcfce 142 Pfam PF02576 RimP N-terminal domain 6 73 1.6E-15 T 23-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DLM_2573 c5de76557e780dfcfc0f1225dc8dcfce 142 Pfam PF17384 RimP C-terminal SH3 domain 76 142 6.6E-20 T 23-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DLM_2573 c5de76557e780dfcfc0f1225dc8dcfce 142 Gene3D G3DSA:3.30.300.70 1 70 7.6E-10 T 23-10-2018 IPR035956 RimP, N-terminal domain superfamily DLM_2573 c5de76557e780dfcfc0f1225dc8dcfce 142 SUPERFAMILY SSF75420 3 73 1.03E-13 T 23-10-2018 IPR035956 RimP, N-terminal domain superfamily DLM_2573 c5de76557e780dfcfc0f1225dc8dcfce 142 SUPERFAMILY SSF74942 74 142 2.88E-17 T 23-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DLM_0035 4a829194b874ee5bea9dc43dea2c6f61 197 Gene3D G3DSA:3.90.950.10 1 197 7.7E-70 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DLM_0035 4a829194b874ee5bea9dc43dea2c6f61 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 193 1.3E-48 T 23-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DLM_0035 4a829194b874ee5bea9dc43dea2c6f61 197 Pfam PF01725 Ham1 family 5 190 7.0E-50 T 23-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DLM_0035 4a829194b874ee5bea9dc43dea2c6f61 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 3 195 46.033 T 23-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 DLM_0035 4a829194b874ee5bea9dc43dea2c6f61 197 SUPERFAMILY SSF52972 3 195 8.37E-68 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DLM_2862 92c7e463122edd2edf422ac836ec3535 166 Pfam PF02620 Uncharacterized ACR, COG1399 59 162 1.3E-12 T 23-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DLM_0832 474dc3079297d98a08c7094be056a4ce 138 SUPERFAMILY SSF54593 9 119 1.02E-15 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_0832 474dc3079297d98a08c7094be056a4ce 138 Gene3D G3DSA:3.10.180.10 2 118 4.8E-19 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DLM_1173 2475e090af9801620c62b558c8f8653b 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 3.8E-51 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DLM_1173 2475e090af9801620c62b558c8f8653b 289 PIRSF PIRSF000103 1 289 2.5E-72 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DLM_1173 2475e090af9801620c62b558c8f8653b 289 Gene3D G3DSA:3.40.50.720 1 158 9.1E-57 T 23-10-2018 DLM_1173 2475e090af9801620c62b558c8f8653b 289 SUPERFAMILY SSF48179 160 285 3.29E-28 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_1173 2475e090af9801620c62b558c8f8653b 289 Gene3D G3DSA:1.10.1040.10 159 286 9.8E-30 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DLM_1173 2475e090af9801620c62b558c8f8653b 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 283 1.9E-25 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DLM_1173 2475e090af9801620c62b558c8f8653b 289 SUPERFAMILY SSF51735 3 161 1.26E-47 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2158 d1b892fe0d512057545ad3288c78b687 227 SUPERFAMILY SSF89562 25 185 1.7E-49 T 23-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DLM_2158 d1b892fe0d512057545ad3288c78b687 227 Pfam PF03737 Aldolase/RraA 28 174 1.2E-39 T 23-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DLM_2158 d1b892fe0d512057545ad3288c78b687 227 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 5 226 4.5E-127 T 23-10-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 DLM_2158 d1b892fe0d512057545ad3288c78b687 227 Gene3D G3DSA:3.50.30.40 26 176 1.0E-52 T 23-10-2018 DLM_2234 669168054a299e849a375035c85a4589 259 Pfam PF03746 LamB/YcsF family 6 243 9.3E-91 T 23-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DLM_2234 669168054a299e849a375035c85a4589 259 SUPERFAMILY SSF88713 6 251 2.59E-87 T 23-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DLM_2234 669168054a299e849a375035c85a4589 259 Gene3D G3DSA:3.20.20.370 5 255 6.1E-92 T 23-10-2018 DLM_3653 2472f0e85e046bce4c0e02859944be3c 928 SMART SM00965 60 111 2.3E-9 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DLM_3653 2472f0e85e046bce4c0e02859944be3c 928 Gene3D G3DSA:3.55.50.30 39 109 2.2E-19 T 23-10-2018 DLM_3653 2472f0e85e046bce4c0e02859944be3c 928 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 255 2.2E-4 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_3653 2472f0e85e046bce4c0e02859944be3c 928 SUPERFAMILY SSF56935 116 928 2.15E-50 T 23-10-2018 DLM_3653 2472f0e85e046bce4c0e02859944be3c 928 Gene3D G3DSA:2.40.170.20 293 928 1.3E-24 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_3653 2472f0e85e046bce4c0e02859944be3c 928 Pfam PF07660 Secretin and TonB N terminus short domain 62 109 2.8E-8 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DLM_2983 96ef4fec33aaddc1e32f7f4c32cb3e21 366 SUPERFAMILY SSF51395 1 365 7.33E-122 T 23-10-2018 DLM_2983 96ef4fec33aaddc1e32f7f4c32cb3e21 366 Gene3D G3DSA:3.20.20.70 3 366 1.8E-140 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_2983 96ef4fec33aaddc1e32f7f4c32cb3e21 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 343 3.5E-93 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DLM_0250 874912c8e3ddcd865501090a87616a8b 206 SUPERFAMILY SSF52507 6 202 2.22E-60 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DLM_0250 874912c8e3ddcd865501090a87616a8b 206 Gene3D G3DSA:3.40.50.1950 1 205 1.8E-82 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DLM_0250 874912c8e3ddcd865501090a87616a8b 206 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 35.687 T 23-10-2018 IPR004507 Flavin prenyltransferase UbiX-like DLM_0250 874912c8e3ddcd865501090a87616a8b 206 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 200 2.9E-62 T 23-10-2018 IPR004507 Flavin prenyltransferase UbiX-like DLM_0250 874912c8e3ddcd865501090a87616a8b 206 Pfam PF02441 Flavoprotein 6 181 1.6E-27 T 23-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DLM_3151 5ddcaf07fe33539259ac12bb3107f989 109 Gene3D G3DSA:2.60.120.10 6 109 6.1E-6 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_3151 5ddcaf07fe33539259ac12bb3107f989 109 SUPERFAMILY SSF51182 29 107 5.1E-8 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_1675 3f8648f982026c8f46100481393e38dc 425 SUPERFAMILY SSF48173 204 422 1.57E-64 T 23-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DLM_1675 3f8648f982026c8f46100481393e38dc 425 Gene3D G3DSA:3.40.50.620 1 126 6.3E-27 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1675 3f8648f982026c8f46100481393e38dc 425 PRINTS PR00147 DNA photolyase signature 346 364 5.3E-12 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DLM_1675 3f8648f982026c8f46100481393e38dc 425 PRINTS PR00147 DNA photolyase signature 326 342 5.3E-12 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DLM_1675 3f8648f982026c8f46100481393e38dc 425 PRINTS PR00147 DNA photolyase signature 385 399 5.3E-12 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DLM_1675 3f8648f982026c8f46100481393e38dc 425 SUPERFAMILY SSF52425 4 177 1.57E-36 T 23-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 DLM_1675 3f8648f982026c8f46100481393e38dc 425 Gene3D G3DSA:1.25.40.80 128 300 1.7E-45 T 23-10-2018 DLM_1675 3f8648f982026c8f46100481393e38dc 425 Pfam PF00875 DNA photolyase 5 165 2.7E-29 T 23-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 DLM_1675 3f8648f982026c8f46100481393e38dc 425 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 3 424 1.5E-124 T 23-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 DLM_1675 3f8648f982026c8f46100481393e38dc 425 Pfam PF03441 FAD binding domain of DNA photolyase 280 422 3.1E-39 T 23-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 DLM_1675 3f8648f982026c8f46100481393e38dc 425 Gene3D G3DSA:1.10.579.10 305 424 6.6E-46 T 23-10-2018 DLM_1330 53a714035e6564453bce2edfc7968e4b 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 154 292 1.1E-16 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DLM_1330 53a714035e6564453bce2edfc7968e4b 346 SUPERFAMILY SSF111369 156 275 2.35E-10 T 23-10-2018 DLM_1330 53a714035e6564453bce2edfc7968e4b 346 Gene3D G3DSA:2.40.50.100 48 154 2.3E-14 T 23-10-2018 DLM_1330 53a714035e6564453bce2edfc7968e4b 346 Gene3D G3DSA:1.10.287.470 82 137 2.3E-14 T 23-10-2018 DLM_1330 53a714035e6564453bce2edfc7968e4b 346 SUPERFAMILY SSF111369 46 136 1.1E-9 T 23-10-2018 DLM_1330 53a714035e6564453bce2edfc7968e4b 346 Gene3D G3DSA:2.40.30.170 232 346 5.5E-35 T 23-10-2018 DLM_1330 53a714035e6564453bce2edfc7968e4b 346 Pfam PF13533 Biotin-lipoyl like 52 97 2.4E-13 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DLM_3959 1c3d309f94df56516ddb05de077b6212 92 Gene3D G3DSA:1.10.720.30 14 73 1.9E-27 T 23-10-2018 IPR036361 SAP domain superfamily DLM_3959 1c3d309f94df56516ddb05de077b6212 92 Pfam PF09905 DNA-binding protein VF530 7 68 9.3E-31 T 23-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 DLM_0123 7292951a22ed9a4e2d2d67d723d29e6c 112 Pfam PF03551 Transcriptional regulator PadR-like family 14 82 1.5E-17 T 23-10-2018 IPR005149 Transcription regulator PadR, N-terminal DLM_0123 7292951a22ed9a4e2d2d67d723d29e6c 112 SUPERFAMILY SSF46785 10 100 4.55E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0123 7292951a22ed9a4e2d2d67d723d29e6c 112 Gene3D G3DSA:1.10.10.10 1 110 6.4E-33 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1129 533dcc0b117f7d2b70c8c3dc8d2b4e89 300 Gene3D G3DSA:3.30.1330.60 106 286 6.6E-56 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_1129 533dcc0b117f7d2b70c8c3dc8d2b4e89 300 Pfam PF00691 OmpA family 159 250 2.1E-13 T 23-10-2018 IPR006665 OmpA-like domain DLM_1129 533dcc0b117f7d2b70c8c3dc8d2b4e89 300 SUPERFAMILY SSF103088 156 263 4.84E-21 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_1129 533dcc0b117f7d2b70c8c3dc8d2b4e89 300 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 65 2.6E-18 T 23-10-2018 IPR025713 Motility protein B, N-terminal domain DLM_1597 9d0f996c88e40985a5b6f47742acd47f 172 PIRSF PIRSF028301 1 172 7.8E-67 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DLM_1597 9d0f996c88e40985a5b6f47742acd47f 172 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 11 163 2.3E-60 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DLM_1597 9d0f996c88e40985a5b6f47742acd47f 172 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 7 164 8.0E-60 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DLM_1342 6a581d88fb8da35f441a5e6508701680 366 SUPERFAMILY SSF48264 37 342 5.24E-17 T 23-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DLM_1342 6a581d88fb8da35f441a5e6508701680 366 Gene3D G3DSA:1.10.630.10 4 364 2.8E-22 T 23-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DLM_1342 6a581d88fb8da35f441a5e6508701680 366 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 314 323 - T 23-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 DLM_1342 6a581d88fb8da35f441a5e6508701680 366 PRINTS PR00359 B-class P450 signature 131 147 4.5E-8 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1342 6a581d88fb8da35f441a5e6508701680 366 PRINTS PR00359 B-class P450 signature 87 98 4.5E-8 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1342 6a581d88fb8da35f441a5e6508701680 366 PRINTS PR00359 B-class P450 signature 321 332 4.5E-8 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1342 6a581d88fb8da35f441a5e6508701680 366 PRINTS PR00359 B-class P450 signature 312 321 4.5E-8 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_1342 6a581d88fb8da35f441a5e6508701680 366 PRINTS PR00359 B-class P450 signature 278 305 4.5E-8 T 23-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DLM_2160 ab6ff4f49f6bc3278af9625b9c28931a 368 Pfam PF04303 PrpF protein 3 359 1.8E-113 T 23-10-2018 IPR007400 PrpF protein DLM_2160 ab6ff4f49f6bc3278af9625b9c28931a 368 Gene3D G3DSA:3.10.310.10 5 357 2.5E-116 T 23-10-2018 DLM_2160 ab6ff4f49f6bc3278af9625b9c28931a 368 SUPERFAMILY SSF54506 2 168 2.98E-61 T 23-10-2018 DLM_2160 ab6ff4f49f6bc3278af9625b9c28931a 368 SUPERFAMILY SSF54506 172 362 1.57E-59 T 23-10-2018 DLM_2160 ab6ff4f49f6bc3278af9625b9c28931a 368 Gene3D G3DSA:3.10.310.10 167 343 2.5E-116 T 23-10-2018 DLM_0277 c7353d871ef23b0037f526d9c0375816 354 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 189 6.2E-56 T 23-10-2018 IPR022301 Integral membrane protein YjbE DLM_0277 c7353d871ef23b0037f526d9c0375816 354 Pfam PF03741 Integral membrane protein TerC family 15 187 2.7E-35 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DLM_0446 26d9445417b9771eca0bddcdd1145bb9 71 PRINTS PR00946 Mercury scavenger protein signature 11 27 3.8E-8 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DLM_0446 26d9445417b9771eca0bddcdd1145bb9 71 PRINTS PR00946 Mercury scavenger protein signature 56 70 3.8E-8 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DLM_0446 26d9445417b9771eca0bddcdd1145bb9 71 PRINTS PR00946 Mercury scavenger protein signature 42 56 3.8E-8 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DLM_0446 26d9445417b9771eca0bddcdd1145bb9 71 PRINTS PR00946 Mercury scavenger protein signature 27 42 3.8E-8 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DLM_0446 26d9445417b9771eca0bddcdd1145bb9 71 SUPERFAMILY SSF55008 2 68 3.67E-21 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DLM_0446 26d9445417b9771eca0bddcdd1145bb9 71 Pfam PF00403 Heavy-metal-associated domain 6 66 1.9E-16 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DLM_0446 26d9445417b9771eca0bddcdd1145bb9 71 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DLM_0446 26d9445417b9771eca0bddcdd1145bb9 71 Gene3D G3DSA:3.30.70.100 1 67 1.7E-23 T 23-10-2018 DLM_2154 5a335b35fff4cf98398487d03354f5b7 315 SUPERFAMILY SSF51735 3 141 1.57E-40 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2154 5a335b35fff4cf98398487d03354f5b7 315 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 122 4.2E-20 T 23-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DLM_2154 5a335b35fff4cf98398487d03354f5b7 315 SUPERFAMILY SSF55347 127 261 1.5E-10 T 23-10-2018 DLM_2154 5a335b35fff4cf98398487d03354f5b7 315 Gene3D G3DSA:3.40.50.720 3 295 2.1E-52 T 23-10-2018 DLM_2154 5a335b35fff4cf98398487d03354f5b7 315 Gene3D G3DSA:3.30.360.10 123 303 2.1E-52 T 23-10-2018 DLM_0743 6c01de23d66ba0d3082f85d6d1f7546d 452 Pfam PF02321 Outer membrane efflux protein 245 427 1.7E-27 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_0743 6c01de23d66ba0d3082f85d6d1f7546d 452 Pfam PF02321 Outer membrane efflux protein 31 222 2.0E-22 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_0743 6c01de23d66ba0d3082f85d6d1f7546d 452 Gene3D G3DSA:1.20.1600.10 28 447 8.7E-89 T 23-10-2018 DLM_0743 6c01de23d66ba0d3082f85d6d1f7546d 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 28 446 1.2E-84 T 23-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 DLM_0743 6c01de23d66ba0d3082f85d6d1f7546d 452 SUPERFAMILY SSF56954 5 433 1.57E-78 T 23-10-2018 DLM_1444 304c2f23a9ef8946445fa6d0ac5e06c2 118 Pfam PF16137 Domain of unknown function (DUF4845) 28 109 4.5E-21 T 23-10-2018 IPR032314 Protein of unknown function DUF4845 DLM_1889 2ed54ebf255715aea7b80749a890a03f 653 Gene3D G3DSA:3.30.420.10 246 471 1.0E-36 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1889 2ed54ebf255715aea7b80749a890a03f 653 SUPERFAMILY SSF53098 252 455 9.99E-24 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1889 2ed54ebf255715aea7b80749a890a03f 653 Pfam PF09299 Mu transposase, C-terminal 483 535 2.6E-8 T 23-10-2018 IPR015378 Transposase-like, Mu, C-terminal DLM_1889 2ed54ebf255715aea7b80749a890a03f 653 Pfam PF00665 Integrase core domain 259 395 3.6E-18 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DLM_3292 75537404b05d8d9eb8d5c1a01950ea50 447 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 430 1.0E-150 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DLM_3292 75537404b05d8d9eb8d5c1a01950ea50 447 PIRSF PIRSF006446 1 446 3.7E-169 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DLM_0040 f1a2d37a0846ba9c4696b2f4ca4ebb43 144 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 28 143 1.3E-33 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 DLM_0040 f1a2d37a0846ba9c4696b2f4ca4ebb43 144 Gene3D G3DSA:2.40.128.520 27 144 2.9E-20 T 23-10-2018 DLM_2485 afb0fbac171b2d80d4f44cfc788e740d 221 Pfam PF04403 Paraquat-inducible protein A 52 208 2.5E-58 T 23-10-2018 IPR007498 Intermembrane transport protein PqiA-like DLM_2050 d6aff2195a62e8eaa2bd1c4344d4cc76 431 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 268 1.3E-63 T 23-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DLM_2050 d6aff2195a62e8eaa2bd1c4344d4cc76 431 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 321 407 3.2E-31 T 23-10-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit DLM_2050 d6aff2195a62e8eaa2bd1c4344d4cc76 431 Gene3D G3DSA:1.10.700.10 306 419 1.5E-40 T 23-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily DLM_2050 d6aff2195a62e8eaa2bd1c4344d4cc76 431 SUPERFAMILY SSF53213 2 277 2.75E-92 T 23-10-2018 DLM_2050 d6aff2195a62e8eaa2bd1c4344d4cc76 431 Gene3D G3DSA:3.40.830.10 3 305 1.5E-89 T 23-10-2018 DLM_2050 d6aff2195a62e8eaa2bd1c4344d4cc76 431 SUPERFAMILY SSF48076 294 414 1.96E-38 T 23-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily DLM_3353 cc1427f954217018f369e8d366810a4a 327 SUPERFAMILY SSF56529 77 325 1.57E-58 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_3353 cc1427f954217018f369e8d366810a4a 327 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 5.1E-39 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DLM_3353 cc1427f954217018f369e8d366810a4a 327 Gene3D G3DSA:3.90.850.10 1 327 1.7E-135 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_3332 ccc6f85dc962f86509a5353c03931ba5 144 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.5E-61 T 23-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_3332 ccc6f85dc962f86509a5353c03931ba5 144 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.18 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DLM_3332 ccc6f85dc962f86509a5353c03931ba5 144 Pfam PF00572 Ribosomal protein L13 14 138 2.6E-55 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DLM_3332 ccc6f85dc962f86509a5353c03931ba5 144 PIRSF PIRSF002181 1 143 8.4E-48 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DLM_3332 ccc6f85dc962f86509a5353c03931ba5 144 SUPERFAMILY SSF52161 1 140 3.01E-59 T 23-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_3332 ccc6f85dc962f86509a5353c03931ba5 144 Gene3D G3DSA:3.90.1180.10 1 142 7.7E-61 T 23-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_2390 86151c63739c6c99e5346d42b828328e 204 Gene3D G3DSA:3.30.70.1210 91 201 4.7E-24 T 23-10-2018 DLM_2390 86151c63739c6c99e5346d42b828328e 204 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 201 3.3E-26 T 23-10-2018 IPR010179 CRISPR-associated protein Cse3 DLM_2390 86151c63739c6c99e5346d42b828328e 204 SUPERFAMILY SSF117987 1 80 3.14E-18 T 23-10-2018 DLM_2390 86151c63739c6c99e5346d42b828328e 204 Pfam PF08798 CRISPR associated protein 1 200 2.9E-46 T 23-10-2018 IPR010179 CRISPR-associated protein Cse3 DLM_2390 86151c63739c6c99e5346d42b828328e 204 Gene3D G3DSA:3.30.70.1200 1 88 3.7E-24 T 23-10-2018 DLM_2390 86151c63739c6c99e5346d42b828328e 204 SUPERFAMILY SSF117987 92 200 2.62E-25 T 23-10-2018 DLM_2390 86151c63739c6c99e5346d42b828328e 204 SMART SM01101 1 200 1.2E-53 T 23-10-2018 IPR010179 CRISPR-associated protein Cse3 DLM_4519 d5af19fdb4bb07ae72185bece285622e 434 SUPERFAMILY SSF56954 27 429 3.14E-85 T 23-10-2018 DLM_4519 d5af19fdb4bb07ae72185bece285622e 434 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 26 432 1.0E-89 T 23-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 DLM_4519 d5af19fdb4bb07ae72185bece285622e 434 Pfam PF02321 Outer membrane efflux protein 28 212 5.7E-29 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_4519 d5af19fdb4bb07ae72185bece285622e 434 Pfam PF02321 Outer membrane efflux protein 233 418 1.9E-33 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_4519 d5af19fdb4bb07ae72185bece285622e 434 Gene3D G3DSA:1.20.1600.10 27 434 3.6E-103 T 23-10-2018 DLM_1247 6c3ad924b55c7ab584eecc5b063112e7 326 Pfam PF07484 Phage Tail Collar Domain 189 246 4.4E-21 T 23-10-2018 IPR011083 Phage tail collar domain DLM_1247 6c3ad924b55c7ab584eecc5b063112e7 326 SUPERFAMILY SSF88874 179 325 6.15E-41 T 23-10-2018 DLM_1247 6c3ad924b55c7ab584eecc5b063112e7 326 Gene3D G3DSA:3.90.1340.10 184 247 2.3E-17 T 23-10-2018 IPR037053 Phage tail collar domain superfamily DLM_3461 f877284ec2f8d062ed6d7119bc2d273b 596 SUPERFAMILY SSF53649 288 579 8.97E-22 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DLM_3461 f877284ec2f8d062ed6d7119bc2d273b 596 Pfam PF00884 Sulfatase 288 577 2.7E-55 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DLM_3461 f877284ec2f8d062ed6d7119bc2d273b 596 Gene3D G3DSA:3.40.720.10 271 596 4.7E-89 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DLM_3461 f877284ec2f8d062ed6d7119bc2d273b 596 Pfam PF08019 Domain of unknown function (DUF1705) 109 259 3.7E-53 T 23-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 DLM_3481 16a9ebece6755057c09688c0ff5f4034 304 SUPERFAMILY SSF103481 49 151 1.96E-10 T 23-10-2018 DLM_3481 16a9ebece6755057c09688c0ff5f4034 304 Pfam PF00892 EamA-like transporter family 15 148 4.2E-24 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3481 16a9ebece6755057c09688c0ff5f4034 304 Pfam PF00892 EamA-like transporter family 164 298 6.3E-21 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3481 16a9ebece6755057c09688c0ff5f4034 304 SUPERFAMILY SSF103481 203 301 1.96E-11 T 23-10-2018 DLM_1183 5ed77d6b615b33b85b093d2a22c5df81 291 Pfam PF00950 ABC 3 transport family 15 273 1.9E-56 T 23-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DLM_1183 5ed77d6b615b33b85b093d2a22c5df81 291 SUPERFAMILY SSF81345 12 271 3.53E-26 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_3578 ee11a88dd5c5de77dfb986ff49c0675b 475 Gene3D G3DSA:1.20.1600.10 54 465 1.6E-104 T 23-10-2018 DLM_3578 ee11a88dd5c5de77dfb986ff49c0675b 475 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 464 4.3E-96 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_3578 ee11a88dd5c5de77dfb986ff49c0675b 475 Gene3D G3DSA:2.20.200.10 100 353 1.6E-104 T 23-10-2018 DLM_3578 ee11a88dd5c5de77dfb986ff49c0675b 475 Pfam PF02321 Outer membrane efflux protein 63 254 9.0E-19 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_3578 ee11a88dd5c5de77dfb986ff49c0675b 475 Pfam PF02321 Outer membrane efflux protein 286 462 1.0E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_3578 ee11a88dd5c5de77dfb986ff49c0675b 475 SUPERFAMILY SSF56954 9 465 3.4E-87 T 23-10-2018 DLM_3289 fb110e3263994741ce5d3a6132d4c714 98 Gene3D G3DSA:1.20.1280.290 1 90 2.4E-29 T 23-10-2018 DLM_3289 fb110e3263994741ce5d3a6132d4c714 98 Pfam PF04193 PQ loop repeat 6 61 3.5E-12 T 23-10-2018 IPR006603 PQ-loop repeat DLM_3540 31a38bbc7e5021dc07a7523315088f3c 373 SUPERFAMILY SSF53756 36 372 1.15E-48 T 23-10-2018 DLM_3540 31a38bbc7e5021dc07a7523315088f3c 373 Gene3D G3DSA:3.40.50.2000 185 373 6.2E-25 T 23-10-2018 DLM_3540 31a38bbc7e5021dc07a7523315088f3c 373 Gene3D G3DSA:3.40.50.2000 30 168 2.0E-11 T 23-10-2018 DLM_3540 31a38bbc7e5021dc07a7523315088f3c 373 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 158 301 1.3E-18 T 23-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DLM_2640 3edabe5eb6b8d190af9d233f46872b5d 326 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 130 211 5.7E-29 T 23-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DLM_2640 3edabe5eb6b8d190af9d233f46872b5d 326 PRINTS PR00394 RHS protein signature 97 117 2.5E-7 T 23-10-2018 IPR001826 RHS protein DLM_2640 3edabe5eb6b8d190af9d233f46872b5d 326 PRINTS PR00394 RHS protein signature 179 198 2.5E-7 T 23-10-2018 IPR001826 RHS protein DLM_2640 3edabe5eb6b8d190af9d233f46872b5d 326 Pfam PF03527 RHS protein 103 138 8.3E-14 T 23-10-2018 IPR001826 RHS protein DLM_2640 3edabe5eb6b8d190af9d233f46872b5d 326 Gene3D G3DSA:2.180.10.10 3 211 5.4E-36 T 23-10-2018 DLM_3649 0c32f4d34c24b0eb27eb3c03d795538a 171 SUPERFAMILY SSF55298 56 167 8.48E-32 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_3649 0c32f4d34c24b0eb27eb3c03d795538a 171 Gene3D G3DSA:3.30.1330.40 41 170 1.2E-34 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_3649 0c32f4d34c24b0eb27eb3c03d795538a 171 Pfam PF01042 Endoribonuclease L-PSP 58 163 9.1E-26 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DLM_3447 5a5e34bf234eb450b65d472cb0391648 424 SUPERFAMILY SSF55874 278 420 2.62E-16 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3447 5a5e34bf234eb450b65d472cb0391648 424 Gene3D G3DSA:3.30.565.10 282 423 1.3E-12 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_3447 5a5e34bf234eb450b65d472cb0391648 424 Gene3D G3DSA:1.10.287.130 197 275 3.6E-5 T 23-10-2018 DLM_1630 d337981e10f92343b494a9125ad70037 2668 SUPERFAMILY SSF51126 4 103 3.14E-5 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor DLM_1630 d337981e10f92343b494a9125ad70037 2668 Pfam PF13332 Haemagluttinin repeat 1640 1775 3.6E-8 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 Pfam PF13332 Haemagluttinin repeat 1895 2063 1.6E-42 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 Pfam PF13332 Haemagluttinin repeat 1559 1617 2.8E-4 T 23-10-2018 IPR025157 Hemagglutinin repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 140 167 1.2 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 446 476 0.0028 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 757 790 0.093 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 527 558 2.2E-5 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1392 1428 2.0 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 734 772 0.032 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1086 1119 1.4E-5 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1437 1468 0.23 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1659 1688 0.21 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 56 78 1.7 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 266 290 1.9 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 695 732 0.15 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 118 157 1.0 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 557 588 6.6E-5 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 405 441 3.1E-4 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 79 118 0.0035 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 489 527 1.5E-7 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 299 338 4.9E-7 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 831 868 0.83 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_1630 d337981e10f92343b494a9125ad70037 2668 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 344 376 0.12 T 23-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DLM_0522 4d9f574186e9ea2d15a98eba76c9eba6 484 Gene3D G3DSA:1.20.1720.10 34 273 2.2E-41 T 23-10-2018 DLM_0522 4d9f574186e9ea2d15a98eba76c9eba6 484 SUPERFAMILY SSF103473 20 475 2.09E-63 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_0522 4d9f574186e9ea2d15a98eba76c9eba6 484 Pfam PF07690 Major Facilitator Superfamily 38 433 2.4E-50 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_0522 4d9f574186e9ea2d15a98eba76c9eba6 484 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 34 442 2.3E-69 T 23-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DLM_0522 4d9f574186e9ea2d15a98eba76c9eba6 484 Gene3D G3DSA:1.20.1250.20 279 477 3.8E-16 T 23-10-2018 DLM_1410 fee6d537fd979192cef91d41a8c808c6 355 Pfam PF00419 Fimbrial protein 208 355 6.0E-16 T 23-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 DLM_1410 fee6d537fd979192cef91d41a8c808c6 355 Gene3D G3DSA:2.60.40.1090 207 354 3.7E-27 T 23-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 DLM_1410 fee6d537fd979192cef91d41a8c808c6 355 SUPERFAMILY SSF49401 212 355 9.94E-25 T 23-10-2018 IPR008966 Adhesion domain superfamily DLM_2042 52c2b15993ab16b03552977ab7a3f6fd 465 PIRSF PIRSF006060 1 459 5.1E-67 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_2042 52c2b15993ab16b03552977ab7a3f6fd 465 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DLM_2042 52c2b15993ab16b03552977ab7a3f6fd 465 Pfam PF00324 Amino acid permease 18 429 6.9E-103 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DLM_2042 52c2b15993ab16b03552977ab7a3f6fd 465 Gene3D G3DSA:1.20.1740.10 9 459 4.0E-58 T 23-10-2018 DLM_3848 ce02d82678d89c1684465ef0aa384c64 199 PIRSF PIRSF010372 3 199 3.6E-51 T 23-10-2018 IPR007396 Transcriptional regulator PAI 2-type DLM_3848 ce02d82678d89c1684465ef0aa384c64 199 SUPERFAMILY SSF50475 15 183 2.89E-31 T 23-10-2018 DLM_3848 ce02d82678d89c1684465ef0aa384c64 199 Gene3D G3DSA:2.30.110.10 3 198 1.1E-53 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DLM_3848 ce02d82678d89c1684465ef0aa384c64 199 Pfam PF04299 Putative FMN-binding domain 4 159 6.3E-39 T 23-10-2018 IPR007396 Transcriptional regulator PAI 2-type DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 Gene3D G3DSA:3.20.70.20 3 589 4.9E-193 T 23-10-2018 DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 24 583 3.2E-188 T 23-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 359 381 7.0E-26 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 387 410 7.0E-26 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 165 184 7.0E-26 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 443 470 7.0E-26 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 PRINTS PR01183 Ribonucleotide reductase large chain signature 321 344 7.0E-26 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 Pfam PF02867 Ribonucleotide reductase, barrel domain 84 575 2.1E-145 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DLM_2792 e7b9fcad0cd1807f4032cdde077ab6e3 955 SUPERFAMILY SSF51998 9 597 7.02E-176 T 23-10-2018 DLM_0985 e0143026100301eb165345b6126ba1d2 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 8.7E-24 T 23-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DLM_0985 e0143026100301eb165345b6126ba1d2 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 8.7E-24 T 23-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DLM_0985 e0143026100301eb165345b6126ba1d2 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 8.7E-24 T 23-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DLM_0985 e0143026100301eb165345b6126ba1d2 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 8.7E-24 T 23-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DLM_0985 e0143026100301eb165345b6126ba1d2 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 1.1E-65 T 23-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 DLM_0985 e0143026100301eb165345b6126ba1d2 258 Pfam PF01311 Bacterial export proteins, family 1 14 245 4.4E-64 T 23-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 Pfam PF00990 Diguanylate cyclase, GGDEF domain 548 703 1.2E-46 T 23-10-2018 IPR000160 GGDEF domain DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 Pfam PF05231 MASE1 11 200 1.4E-18 T 23-10-2018 IPR007895 MASE1 DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 SMART SM00052 718 965 7.9E-120 T 23-10-2018 IPR001633 EAL domain DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 Pfam PF00563 EAL domain 724 960 4.0E-73 T 23-10-2018 IPR001633 EAL domain DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 SMART SM01079 251 439 9.3E-35 T 23-10-2018 IPR006189 CHASE domain DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 SUPERFAMILY SSF55073 553 710 5.96E-49 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 SUPERFAMILY SSF141868 723 972 1.24E-89 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 547 707 1.8E-41 T 23-10-2018 IPR000160 GGDEF domain DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 SMART SM00267 537 708 8.6E-65 T 23-10-2018 IPR000160 GGDEF domain DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 Gene3D G3DSA:3.30.450.350 256 446 6.5E-19 T 23-10-2018 DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 Gene3D G3DSA:3.30.70.270 542 720 2.6E-57 T 23-10-2018 DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 Pfam PF03924 CHASE domain 255 426 2.6E-33 T 23-10-2018 IPR006189 CHASE domain DLM_4435 e8790158af41e03daf253da4cc8dbacf 980 Gene3D G3DSA:3.20.20.450 721 975 9.4E-101 T 23-10-2018 IPR035919 EAL domain superfamily DLM_0888 48931a4596e22a4c279a8b23202890b9 153 SUPERFAMILY SSF46689 17 138 1.13E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_0888 48931a4596e22a4c279a8b23202890b9 153 Pfam PF08765 Mor transcription activator family 36 137 1.3E-8 T 23-10-2018 IPR014875 Mor transcription activator DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 SUPERFAMILY SSF55298 295 418 5.65E-31 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 Pfam PF01042 Endoribonuclease L-PSP 311 414 4.9E-24 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 Pfam PF01042 Endoribonuclease L-PSP 171 274 1.2E-24 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 Pfam PF01042 Endoribonuclease L-PSP 13 128 4.1E-28 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 Gene3D G3DSA:3.30.1330.40 290 420 4.7E-32 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 SUPERFAMILY SSF55298 144 282 3.61E-32 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 11 128 2.0E-34 T 23-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 Gene3D G3DSA:3.30.1330.40 146 275 3.4E-32 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 SUPERFAMILY SSF55298 9 135 3.93E-36 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_1915 0541aa651bd1da24f16b3349ae7c45b2 424 Gene3D G3DSA:3.30.1330.40 8 135 5.9E-39 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DLM_3062 8b05f017cc5ba6c509adb055feb5bb44 225 SUPERFAMILY SSF103088 84 216 4.97E-27 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_3062 8b05f017cc5ba6c509adb055feb5bb44 225 PRINTS PR01021 OMPA domain signature 95 117 3.0E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_3062 8b05f017cc5ba6c509adb055feb5bb44 225 PRINTS PR01021 OMPA domain signature 144 160 3.0E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_3062 8b05f017cc5ba6c509adb055feb5bb44 225 ProSitePatterns PS01068 OmpA-like domain. 131 175 - T 23-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 DLM_3062 8b05f017cc5ba6c509adb055feb5bb44 225 Gene3D G3DSA:3.30.1330.60 77 220 1.5E-39 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_3062 8b05f017cc5ba6c509adb055feb5bb44 225 Pfam PF00691 OmpA family 94 183 1.9E-17 T 23-10-2018 IPR006665 OmpA-like domain DLM_3062 8b05f017cc5ba6c509adb055feb5bb44 225 PRINTS PR01022 Outer membrane protein A signature 83 98 9.6E-5 T 23-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DLM_3062 8b05f017cc5ba6c509adb055feb5bb44 225 PRINTS PR01022 Outer membrane protein A signature 153 172 9.6E-5 T 23-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DLM_2657 e96dd00dc3a14cd86d8d67352854630b 184 Gene3D G3DSA:3.40.630.30 2 170 1.4E-32 T 23-10-2018 DLM_2657 e96dd00dc3a14cd86d8d67352854630b 184 Pfam PF13302 Acetyltransferase (GNAT) domain 9 157 4.7E-20 T 23-10-2018 IPR000182 GNAT domain DLM_2657 e96dd00dc3a14cd86d8d67352854630b 184 SUPERFAMILY SSF55729 5 163 1.8E-28 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_4050 5d551b6ea3b0112460b50ee478b4bbb5 248 Pfam PF00072 Response regulator receiver domain 10 126 5.3E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4050 5d551b6ea3b0112460b50ee478b4bbb5 248 SMART SM00448 8 126 7.0E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_4050 5d551b6ea3b0112460b50ee478b4bbb5 248 SUPERFAMILY SSF52172 5 138 4.84E-29 T 23-10-2018 IPR011006 CheY-like superfamily DLM_4050 5d551b6ea3b0112460b50ee478b4bbb5 248 Gene3D G3DSA:3.40.50.2300 1 137 2.3E-28 T 23-10-2018 DLM_0482 1195f9cc8a1b7b98ffaf16ad0289a2ec 175 SUPERFAMILY SSF49401 28 175 1.14E-24 T 23-10-2018 IPR008966 Adhesion domain superfamily DLM_0482 1195f9cc8a1b7b98ffaf16ad0289a2ec 175 Pfam PF16970 Type-1 fimbrial protein, A 54 175 1.7E-18 T 23-10-2018 IPR039458 Type-1 fimbrial protein, A DLM_0482 1195f9cc8a1b7b98ffaf16ad0289a2ec 175 Gene3D G3DSA:2.60.40.1090 27 175 2.9E-30 T 23-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 DLM_2446 5f46e3df355f6f1de03c24718eb6b93f 136 Pfam PF00460 Flagella basal body rod protein 9 31 1.2E-6 T 23-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DLM_2446 5f46e3df355f6f1de03c24718eb6b93f 136 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 134 3.5E-16 T 23-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DLM_2446 5f46e3df355f6f1de03c24718eb6b93f 136 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 136 3.2E-53 T 23-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 DLM_2446 5f46e3df355f6f1de03c24718eb6b93f 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DLM_3036 db26ab123798222570e83559b9374d1c 231 Gene3D G3DSA:3.30.110.170 32 225 2.8E-14 T 23-10-2018 DLM_3036 db26ab123798222570e83559b9374d1c 231 Pfam PF04402 Protein of unknown function (DUF541) 30 226 3.5E-25 T 23-10-2018 IPR007497 Protein of unknown function DUF541 DLM_3036 db26ab123798222570e83559b9374d1c 231 Gene3D G3DSA:3.30.70.2970 41 142 2.8E-14 T 23-10-2018 DLM_3781 98ce9d291e1b0c825ee6eb6e0ff77ffc 148 Gene3D G3DSA:3.40.630.30 1 140 3.7E-26 T 23-10-2018 DLM_3781 98ce9d291e1b0c825ee6eb6e0ff77ffc 148 Pfam PF00583 Acetyltransferase (GNAT) family 43 131 7.0E-13 T 23-10-2018 IPR000182 GNAT domain DLM_3781 98ce9d291e1b0c825ee6eb6e0ff77ffc 148 SUPERFAMILY SSF55729 1 133 4.32E-24 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_2547 798f591dcd000a88d5a34ff0e57368c0 130 Pfam PF13411 MerR HTH family regulatory protein 6 71 6.1E-17 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_2547 798f591dcd000a88d5a34ff0e57368c0 130 SMART SM00422 6 73 2.8E-20 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_2547 798f591dcd000a88d5a34ff0e57368c0 130 SUPERFAMILY SSF46955 6 120 2.82E-26 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_2547 798f591dcd000a88d5a34ff0e57368c0 130 Gene3D G3DSA:1.10.1660.10 4 129 1.4E-26 T 23-10-2018 DLM_1417 574a721321acfde5efa4f2f8c36d85a9 368 SUPERFAMILY SSF58104 14 251 1.05E-47 T 23-10-2018 DLM_1417 574a721321acfde5efa4f2f8c36d85a9 368 SMART SM00283 29 266 1.8E-24 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1417 574a721321acfde5efa4f2f8c36d85a9 368 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 117 246 1.7E-34 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1417 574a721321acfde5efa4f2f8c36d85a9 368 Gene3D G3DSA:1.10.287.950 4 259 7.9E-49 T 23-10-2018 DLM_1417 574a721321acfde5efa4f2f8c36d85a9 368 Gene3D G3DSA:1.20.120.30 265 362 1.3E-5 T 23-10-2018 DLM_1417 574a721321acfde5efa4f2f8c36d85a9 368 Pfam PF13682 Chemoreceptor zinc-binding domain 260 327 2.3E-12 T 23-10-2018 IPR025991 Chemoreceptor zinc-binding domain DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 Pfam PF03466 LysR substrate binding domain 94 294 4.5E-36 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.3E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 Gene3D G3DSA:3.40.190.10 165 264 4.8E-51 T 23-10-2018 DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 SUPERFAMILY SSF46785 4 87 6.18E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.4E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.4E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.4E-9 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 SUPERFAMILY SSF53850 95 297 2.9E-38 T 23-10-2018 DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 Gene3D G3DSA:1.10.10.10 8 97 1.6E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4052 1d6d5bdc3d7ea94bc5a92d917cd40991 305 Gene3D G3DSA:3.40.190.10 102 291 4.8E-51 T 23-10-2018 DLM_1645 7344baad0d5217aba5cfcb269360700f 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 126 1.1E-9 T 23-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DLM_1645 7344baad0d5217aba5cfcb269360700f 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 104 114 1.1E-9 T 23-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DLM_1645 7344baad0d5217aba5cfcb269360700f 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 143 155 1.1E-9 T 23-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DLM_1645 7344baad0d5217aba5cfcb269360700f 192 Pfam PF00717 Peptidase S24-like 107 174 5.3E-16 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DLM_1645 7344baad0d5217aba5cfcb269360700f 192 SUPERFAMILY SSF51306 66 189 8.37E-36 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DLM_1645 7344baad0d5217aba5cfcb269360700f 192 Gene3D G3DSA:2.10.109.10 77 191 1.7E-42 T 23-10-2018 DLM_2353 ca68e51427339d605e7a88f7fbb1b7ca 653 Gene3D G3DSA:3.20.20.370 24 286 2.3E-68 T 23-10-2018 DLM_2353 ca68e51427339d605e7a88f7fbb1b7ca 653 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 304 627 1.0E-140 T 23-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal DLM_2353 ca68e51427339d605e7a88f7fbb1b7ca 653 Pfam PF01522 Polysaccharide deacetylase 84 247 6.4E-25 T 23-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DLM_2353 ca68e51427339d605e7a88f7fbb1b7ca 653 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 30 648 7.8E-253 T 23-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 DLM_2353 ca68e51427339d605e7a88f7fbb1b7ca 653 SUPERFAMILY SSF88713 47 333 2.47E-34 T 23-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DLM_2353 ca68e51427339d605e7a88f7fbb1b7ca 653 Gene3D G3DSA:3.20.20.80 295 653 1.6E-139 T 23-10-2018 DLM_0258 3fbd4b6ceb5c17fffd869c596f116efb 186 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 184 2.6E-31 T 23-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DLM_0258 3fbd4b6ceb5c17fffd869c596f116efb 186 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 185 7.3E-30 T 23-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related DLM_0489 9a2624783d3619f5fb5ebb8e47ddf298 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 306 5.5E-148 T 23-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DLM_0489 9a2624783d3619f5fb5ebb8e47ddf298 310 Gene3D G3DSA:3.40.50.1100 6 302 1.6E-130 T 23-10-2018 DLM_0489 9a2624783d3619f5fb5ebb8e47ddf298 310 SUPERFAMILY SSF53686 1 306 1.26E-105 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DLM_0489 9a2624783d3619f5fb5ebb8e47ddf298 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 23-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DLM_0489 9a2624783d3619f5fb5ebb8e47ddf298 310 Gene3D G3DSA:3.40.50.1100 45 145 1.6E-130 T 23-10-2018 DLM_0489 9a2624783d3619f5fb5ebb8e47ddf298 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 306 1.4E-141 T 23-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DLM_0489 9a2624783d3619f5fb5ebb8e47ddf298 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 293 6.1E-68 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DLM_0657 6f9846a28c974fbc25ec33c3c4e5ee14 159 SUPERFAMILY SSF89562 5 157 3.27E-50 T 23-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DLM_0657 6f9846a28c974fbc25ec33c3c4e5ee14 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.8E-67 T 23-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 DLM_0657 6f9846a28c974fbc25ec33c3c4e5ee14 159 Gene3D G3DSA:3.50.30.40 1 159 5.6E-67 T 23-10-2018 DLM_0657 6f9846a28c974fbc25ec33c3c4e5ee14 159 Pfam PF03737 Aldolase/RraA 5 153 3.3E-44 T 23-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 SUPERFAMILY SSF160996 197 353 2.49E-11 T 23-10-2018 DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 404 5.1E-86 T 23-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 Gene3D G3DSA:2.40.30.10 196 352 1.2E-66 T 23-10-2018 DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 30 410 2.3E-162 T 23-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 Gene3D G3DSA:1.10.8.260 280 335 1.2E-66 T 23-10-2018 IPR023166 HI0933-like insert domain superfamily DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 1.1E-8 T 23-10-2018 DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.1E-8 T 23-10-2018 DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 Pfam PF03486 HI0933-like protein 9 404 2.6E-108 T 23-10-2018 DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 Gene3D G3DSA:3.50.50.60 12 399 1.2E-66 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1424 cb7c4f4bfcea6f78512088150bf05d51 416 SUPERFAMILY SSF51905 8 410 4.64E-43 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3894 5f325301d4b14f0b21cdf346351f4748 348 SUPERFAMILY SSF49401 208 348 2.19E-22 T 23-10-2018 IPR008966 Adhesion domain superfamily DLM_3894 5f325301d4b14f0b21cdf346351f4748 348 Pfam PF00419 Fimbrial protein 201 348 2.0E-16 T 23-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 DLM_3894 5f325301d4b14f0b21cdf346351f4748 348 Gene3D G3DSA:2.60.40.1090 207 348 8.6E-26 T 23-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 DLM_4356 b643196aaec48a4c9e30fe374375856c 238 SUPERFAMILY SSF52317 24 199 6.51E-40 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_4356 b643196aaec48a4c9e30fe374375856c 238 Gene3D G3DSA:3.40.50.880 13 233 3.7E-52 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_4356 b643196aaec48a4c9e30fe374375856c 238 Pfam PF00117 Glutamine amidotransferase class-I 30 193 1.2E-15 T 23-10-2018 IPR017926 Glutamine amidotransferase DLM_2322 a3453c0e08aaa9f4c48f1e40705d9e3e 596 Gene3D G3DSA:1.10.645.10 1 581 1.4E-280 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2322 a3453c0e08aaa9f4c48f1e40705d9e3e 596 SUPERFAMILY SSF56762 10 581 3.92E-178 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_2322 a3453c0e08aaa9f4c48f1e40705d9e3e 596 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 52 77 - T 23-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 DLM_2322 a3453c0e08aaa9f4c48f1e40705d9e3e 596 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 572 581 - T 23-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 DLM_2322 a3453c0e08aaa9f4c48f1e40705d9e3e 596 Pfam PF00374 Nickel-dependent hydrogenase 52 581 7.0E-237 T 23-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 DLM_2705 49d35bb51a86bef91993026d4f6b3ec0 245 Gene3D G3DSA:3.40.50.300 13 170 3.6E-10 T 23-10-2018 DLM_2705 49d35bb51a86bef91993026d4f6b3ec0 245 SUPERFAMILY SSF52540 33 224 9.36E-16 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2705 49d35bb51a86bef91993026d4f6b3ec0 245 Pfam PF13401 AAA domain 34 145 9.4E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3713 e6d6e5deba0590c74767861029c0bb64 213 Gene3D G3DSA:3.40.190.10 94 180 1.1E-72 T 23-10-2018 DLM_3713 e6d6e5deba0590c74767861029c0bb64 213 Pfam PF01634 ATP phosphoribosyltransferase 52 205 1.8E-51 T 23-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DLM_3713 e6d6e5deba0590c74767861029c0bb64 213 SUPERFAMILY SSF53850 2 210 9.12E-68 T 23-10-2018 DLM_3713 e6d6e5deba0590c74767861029c0bb64 213 Gene3D G3DSA:3.40.190.10 4 201 1.1E-72 T 23-10-2018 DLM_3713 e6d6e5deba0590c74767861029c0bb64 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 188 6.0E-61 T 23-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DLM_3713 e6d6e5deba0590c74767861029c0bb64 213 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 147 168 - T 23-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 DLM_3713 e6d6e5deba0590c74767861029c0bb64 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 2 212 58.331 T 23-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 DLM_3739 0024c4b9897d8091d008c919877980d0 435 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 21 435 35.058 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 Pfam PF01566 Natural resistance-associated macrophage protein 53 410 3.0E-128 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 348 365 1.1E-55 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 140 159 1.1E-55 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 380 399 1.1E-55 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 165 186 1.1E-55 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 112 138 1.1E-55 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 217 240 1.1E-55 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 320 339 1.1E-55 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_3739 0024c4b9897d8091d008c919877980d0 435 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 32 404 6.6E-106 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DLM_1672 6cb0cc20c861ce3570561f78d0279b3b 74 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 11 73 1.0E-14 T 23-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich DLM_1672 6cb0cc20c861ce3570561f78d0279b3b 74 Pfam PF09493 Tryptophan-rich protein (DUF2389) 13 73 1.1E-19 T 23-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 SUPERFAMILY SSF54211 11 170 1.14E-29 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 393 2.7E-96 T 23-10-2018 IPR000523 Magnesium chelatase ChlI domain DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 4.2E-183 T 23-10-2018 IPR004482 Mg chelatase-related protein DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 2.5E-8 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 208 223 2.5E-8 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 2.5E-8 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 2.5E-8 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.3E-25 T 23-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 140 1.0E-44 T 23-10-2018 DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 Gene3D G3DSA:3.40.50.300 186 498 1.0E-54 T 23-10-2018 DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 SMART SM00382 209 391 1.6E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_0070 8a4a062698ed06aaa26da399a76062e2 499 SUPERFAMILY SSF52540 189 495 5.73E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1192 c877244be70aa7975d5848341afcdd8f 536 PIRSF PIRSF006630 4 536 7.9E-199 T 23-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DLM_1192 c877244be70aa7975d5848341afcdd8f 536 SUPERFAMILY SSF56317 6 245 7.33E-64 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_1192 c877244be70aa7975d5848341afcdd8f 536 Pfam PF00795 Carbon-nitrogen hydrolase 7 251 2.2E-28 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DLM_1192 c877244be70aa7975d5848341afcdd8f 536 TIGRFAM TIGR00552 nadE: NAD+ synthetase 271 513 2.9E-61 T 23-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 DLM_1192 c877244be70aa7975d5848341afcdd8f 536 Gene3D G3DSA:3.60.110.10 3 255 3.3E-91 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_1192 c877244be70aa7975d5848341afcdd8f 536 SUPERFAMILY SSF52402 252 521 1.7E-77 T 23-10-2018 DLM_1192 c877244be70aa7975d5848341afcdd8f 536 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 6 536 29.893 T 23-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DLM_1192 c877244be70aa7975d5848341afcdd8f 536 Gene3D G3DSA:3.40.50.620 262 536 5.6E-117 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1192 c877244be70aa7975d5848341afcdd8f 536 Pfam PF02540 NAD synthase 264 512 2.3E-72 T 23-10-2018 IPR022310 NAD/GMP synthase DLM_2297 873d197f0d0fd5202fe82950b433a6b3 358 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 5.1E-117 T 23-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 DLM_2297 873d197f0d0fd5202fe82950b433a6b3 358 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 353 2.3E-69 T 23-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 Gene3D G3DSA:2.30.42.10 378 470 2.8E-13 T 23-10-2018 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 31 463 8.9E-149 T 23-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 SUPERFAMILY SSF50156 381 467 4.07E-12 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 SMART SM00228 380 458 1.4E-5 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 SMART SM00228 261 343 1.2E-12 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 Pfam PF13365 Trypsin-like peptidase domain 89 222 1.1E-35 T 23-10-2018 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 SUPERFAMILY SSF50494 29 253 2.64E-69 T 23-10-2018 IPR009003 Peptidase S1, PA clan DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 Gene3D G3DSA:2.40.10.120 29 254 4.6E-84 T 23-10-2018 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 Pfam PF13180 PDZ domain 262 350 2.6E-14 T 23-10-2018 IPR001478 PDZ domain GO:0005515 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 Gene3D G3DSA:2.30.42.10 256 364 2.8E-27 T 23-10-2018 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 PRINTS PR00834 HtrA/DegQ protease family signature 119 139 6.4E-52 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 PRINTS PR00834 HtrA/DegQ protease family signature 215 232 6.4E-52 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 PRINTS PR00834 HtrA/DegQ protease family signature 98 110 6.4E-52 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 PRINTS PR00834 HtrA/DegQ protease family signature 159 183 6.4E-52 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 PRINTS PR00834 HtrA/DegQ protease family signature 193 210 6.4E-52 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 PRINTS PR00834 HtrA/DegQ protease family signature 301 313 6.4E-52 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DLM_1440 5cdc99179a1641c810a54bf92bf6587e 471 SUPERFAMILY SSF50156 219 342 2.1E-25 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 DLM_0381 a13b001ec77a0c9912f5fc776c8b36c1 204 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 6 183 1.5E-92 T 23-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO DLM_0381 a13b001ec77a0c9912f5fc776c8b36c1 204 Gene3D G3DSA:1.10.760.10 42 204 1.3E-75 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0381 a13b001ec77a0c9912f5fc776c8b36c1 204 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 6 181 1.3E-84 T 23-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO DLM_0381 a13b001ec77a0c9912f5fc776c8b36c1 204 SUPERFAMILY SSF46626 16 196 1.25E-30 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2152 b4820f9f118679589a8f8d5844a84298 280 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 266 4.3E-59 T 23-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DLM_2152 b4820f9f118679589a8f8d5844a84298 280 Gene3D G3DSA:3.40.830.10 1 280 9.8E-85 T 23-10-2018 DLM_2152 b4820f9f118679589a8f8d5844a84298 280 SUPERFAMILY SSF53213 2 278 1.23E-92 T 23-10-2018 DLM_0564 a89da379181e1f6d9a6e123773ab4681 278 Pfam PF05036 Sporulation related domain 212 269 4.2E-13 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 DLM_0564 a89da379181e1f6d9a6e123773ab4681 278 SUPERFAMILY SSF110997 210 273 3.14E-15 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_0564 a89da379181e1f6d9a6e123773ab4681 278 Gene3D G3DSA:3.30.70.1070 212 274 2.9E-13 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DLM_3176 2f25a483de9639025131adfd5df84534 828 Pfam PF02687 FtsX-like permease family 289 379 2.3E-6 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DLM_4299 3d25b1126d8b87d9fc368a8279e3e5e6 427 Gene3D G3DSA:3.40.50.11280 66 205 3.6E-47 T 23-10-2018 DLM_4299 3d25b1126d8b87d9fc368a8279e3e5e6 427 SUPERFAMILY SSF56059 250 357 1.04E-6 T 23-10-2018 DLM_4299 3d25b1126d8b87d9fc368a8279e3e5e6 427 Pfam PF08886 Glutamate-cysteine ligase 18 419 2.2E-198 T 23-10-2018 IPR011718 Glutamate--cysteine ligase GshA DLM_4299 3d25b1126d8b87d9fc368a8279e3e5e6 427 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 19 422 5.4E-195 T 23-10-2018 IPR011718 Glutamate--cysteine ligase GshA DLM_3770 abfef8e43f740f4a02fac95aead344a7 586 Pfam PF01103 Surface antigen 303 586 2.0E-32 T 23-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DLM_3770 abfef8e43f740f4a02fac95aead344a7 586 Gene3D G3DSA:3.10.20.310 203 278 2.4E-12 T 23-10-2018 DLM_3770 abfef8e43f740f4a02fac95aead344a7 586 Gene3D G3DSA:2.40.160.50 279 585 2.3E-66 T 23-10-2018 DLM_3179 358957dcffe876a3bf5a5f2e54833ac7 418 Gene3D G3DSA:3.30.70.270 243 410 2.8E-45 T 23-10-2018 DLM_3179 358957dcffe876a3bf5a5f2e54833ac7 418 SUPERFAMILY SSF55073 248 404 1.49E-39 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_3179 358957dcffe876a3bf5a5f2e54833ac7 418 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 403 8.6E-36 T 23-10-2018 IPR000160 GGDEF domain DLM_3179 358957dcffe876a3bf5a5f2e54833ac7 418 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 399 6.1E-33 T 23-10-2018 IPR000160 GGDEF domain DLM_3179 358957dcffe876a3bf5a5f2e54833ac7 418 SMART SM00267 232 403 1.7E-36 T 23-10-2018 IPR000160 GGDEF domain DLM_2620 e8e1a77aade7b686d5c884b6b7a6915e 316 Pfam PF02678 Pirin 42 148 8.7E-31 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DLM_2620 e8e1a77aade7b686d5c884b6b7a6915e 316 Pfam PF05726 Pirin C-terminal cupin domain 201 301 2.9E-14 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DLM_2620 e8e1a77aade7b686d5c884b6b7a6915e 316 SUPERFAMILY SSF51182 31 312 1.03E-67 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_2620 e8e1a77aade7b686d5c884b6b7a6915e 316 Gene3D G3DSA:2.60.120.10 25 271 4.6E-59 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_2620 e8e1a77aade7b686d5c884b6b7a6915e 316 PIRSF PIRSF006232 26 308 5.5E-71 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DLM_1431 ec4e791854c34bf91dacbaa70e06e65b 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 21 293 45.619 T 23-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DLM_1431 ec4e791854c34bf91dacbaa70e06e65b 293 Pfam PF02666 Phosphatidylserine decarboxylase 74 288 4.2E-58 T 23-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DLM_1431 ec4e791854c34bf91dacbaa70e06e65b 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 60 290 5.9E-73 T 23-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DLM_2982 02a915a33de009564bdbefacba26f32e 246 Gene3D G3DSA:3.40.109.10 1 246 3.0E-70 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_2982 02a915a33de009564bdbefacba26f32e 246 PIRSF PIRSF005426 1 245 1.2E-77 T 23-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 DLM_2982 02a915a33de009564bdbefacba26f32e 246 Pfam PF00881 Nitroreductase family 9 164 8.2E-26 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DLM_2982 02a915a33de009564bdbefacba26f32e 246 SUPERFAMILY SSF55469 1 244 1.1E-65 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_2030 a9d8f49aeb980ec91fb10269da26fb6d 181 SMART SM00450 57 164 3.1E-11 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_2030 a9d8f49aeb980ec91fb10269da26fb6d 181 SUPERFAMILY SSF52821 41 179 3.4E-20 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_2030 a9d8f49aeb980ec91fb10269da26fb6d 181 Gene3D G3DSA:3.40.250.10 51 181 2.2E-31 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_2030 a9d8f49aeb980ec91fb10269da26fb6d 181 Pfam PF00581 Rhodanese-like domain 64 156 2.6E-12 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_3838 e7985b4ff7aff46c2356aae0eb1d86a5 112 ProSitePatterns PS00380 Rhodanese signature 1. 39 50 - T 23-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 DLM_3838 e7985b4ff7aff46c2356aae0eb1d86a5 112 SUPERFAMILY SSF52821 13 98 2.88E-20 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_3838 e7985b4ff7aff46c2356aae0eb1d86a5 112 Pfam PF00581 Rhodanese-like domain 19 96 2.7E-9 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_3838 e7985b4ff7aff46c2356aae0eb1d86a5 112 SMART SM00450 14 111 5.6E-10 T 23-10-2018 IPR001763 Rhodanese-like domain DLM_3838 e7985b4ff7aff46c2356aae0eb1d86a5 112 Gene3D G3DSA:3.40.250.10 12 110 1.6E-19 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily DLM_2876 2b26bf46b9ba30c5207661ef3f5910a0 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 40.844 T 23-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DLM_2876 2b26bf46b9ba30c5207661ef3f5910a0 128 Pfam PF01597 Glycine cleavage H-protein 8 126 1.7E-44 T 23-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate DLM_2876 2b26bf46b9ba30c5207661ef3f5910a0 128 Gene3D G3DSA:2.40.50.100 2 127 1.3E-48 T 23-10-2018 DLM_2876 2b26bf46b9ba30c5207661ef3f5910a0 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DLM_2876 2b26bf46b9ba30c5207661ef3f5910a0 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 4.9E-49 T 23-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DLM_2876 2b26bf46b9ba30c5207661ef3f5910a0 128 SUPERFAMILY SSF51230 3 126 3.66E-43 T 23-10-2018 IPR011053 Single hybrid motif DLM_3498 0b6937fdecf5905bff0757e8e3fabfa9 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 220 4.1E-20 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3498 0b6937fdecf5905bff0757e8e3fabfa9 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 1.4E-20 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_3498 0b6937fdecf5905bff0757e8e3fabfa9 229 Gene3D G3DSA:1.10.3720.10 2 224 3.3E-50 T 23-10-2018 IPR035906 MetI-like superfamily DLM_3498 0b6937fdecf5905bff0757e8e3fabfa9 229 SUPERFAMILY SSF161098 8 206 4.69E-40 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2684 9810d6bcfd7d725e29a1a05ee65ee4ed 164 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 7 116 2.3E-17 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_2684 9810d6bcfd7d725e29a1a05ee65ee4ed 164 Pfam PF05069 Phage virion morphogenesis family 9 158 6.6E-26 T 23-10-2018 IPR006522 Phage virion morphogensis protein DLM_0943 48ee2a4fa9fe90255ba72babf591b524 271 Gene3D G3DSA:3.40.50.11240 71 248 6.4E-61 T 23-10-2018 DLM_0943 48ee2a4fa9fe90255ba72babf591b524 271 PIRSF PIRSF018982 6 258 3.8E-91 T 23-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DLM_0943 48ee2a4fa9fe90255ba72babf591b524 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 15 249 1.8E-88 T 23-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DLM_0943 48ee2a4fa9fe90255ba72babf591b524 271 Gene3D G3DSA:1.10.30.40 8 60 1.5E-9 T 23-10-2018 DLM_1071 32ea89d8542370a7d1f39f801310f516 452 Gene3D G3DSA:3.30.2290.10 10 237 2.5E-90 T 23-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DLM_1071 32ea89d8542370a7d1f39f801310f516 452 Pfam PF01523 Putative modulator of DNA gyrase 40 328 3.6E-63 T 23-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DLM_1071 32ea89d8542370a7d1f39f801310f516 452 SUPERFAMILY SSF111283 18 451 1.31E-129 T 23-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DLM_2281 9b846fdad0c41b8600d60abc73176f29 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 1.4E-137 T 23-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 DLM_2281 9b846fdad0c41b8600d60abc73176f29 307 SUPERFAMILY SSF56752 1 303 4.71E-105 T 23-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DLM_2281 9b846fdad0c41b8600d60abc73176f29 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 23-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DLM_2281 9b846fdad0c41b8600d60abc73176f29 307 Gene3D G3DSA:3.20.10.10 130 295 2.8E-56 T 23-10-2018 DLM_2281 9b846fdad0c41b8600d60abc73176f29 307 Gene3D G3DSA:3.30.470.10 2 129 1.3E-42 T 23-10-2018 DLM_2281 9b846fdad0c41b8600d60abc73176f29 307 Pfam PF01063 Amino-transferase class IV 36 266 5.0E-56 T 23-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DLM_1321 eb30ac0a9940625502421fe8487e2f33 179 Pfam PF12833 Helix-turn-helix domain 97 174 2.5E-20 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1321 eb30ac0a9940625502421fe8487e2f33 179 SUPERFAMILY SSF46689 130 174 1.75E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1321 eb30ac0a9940625502421fe8487e2f33 179 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 143 158 9.9E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_1321 eb30ac0a9940625502421fe8487e2f33 179 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 158 174 9.9E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_1321 eb30ac0a9940625502421fe8487e2f33 179 Gene3D G3DSA:1.10.10.60 73 178 8.2E-26 T 23-10-2018 DLM_1321 eb30ac0a9940625502421fe8487e2f33 179 SMART SM00342 91 174 5.2E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 Pfam PF01494 FAD binding domain 2 342 2.0E-83 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 2.2E-27 T 23-10-2018 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 2.2E-27 T 23-10-2018 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 2.2E-27 T 23-10-2018 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 2.2E-27 T 23-10-2018 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 Gene3D G3DSA:3.30.9.10 73 387 7.4E-158 T 23-10-2018 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 Gene3D G3DSA:3.50.50.60 2 351 7.4E-158 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 SUPERFAMILY SSF54373 175 275 1.14E-43 T 23-10-2018 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 2 390 9.1E-206 T 23-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 DLM_1320 cdd1cf026cf79a6840d1ac6d8a212f7b 390 SUPERFAMILY SSF51905 2 389 2.16E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3241 b2acae46a0ca366e3127d652702fbf2b 158 PIRSF PIRSF000216 1 157 2.2E-44 T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DLM_3241 b2acae46a0ca366e3127d652702fbf2b 158 Gene3D G3DSA:3.40.30.10 70 151 7.5E-20 T 23-10-2018 DLM_3241 b2acae46a0ca366e3127d652702fbf2b 158 Gene3D G3DSA:1.10.10.1590 1 69 1.1E-12 T 23-10-2018 DLM_3241 b2acae46a0ca366e3127d652702fbf2b 158 SUPERFAMILY SSF52833 2 152 3.69E-43 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3241 b2acae46a0ca366e3127d652702fbf2b 158 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 10 152 6.1E-39 T 23-10-2018 DLM_3162 afc7beea9fefc2bcee7f0f5ef844ec89 104 SUPERFAMILY SSF48600 6 92 2.14E-21 T 23-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DLM_3162 afc7beea9fefc2bcee7f0f5ef844ec89 104 SMART SM00830 14 93 1.7E-20 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DLM_3162 afc7beea9fefc2bcee7f0f5ef844ec89 104 Gene3D G3DSA:1.20.59.10 3 99 7.4E-31 T 23-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DLM_3162 afc7beea9fefc2bcee7f0f5ef844ec89 104 Pfam PF01817 Chorismate mutase type II 14 90 2.0E-15 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DLM_3565 7b3d2cafae3249543eb084995e1b7ade 449 SUPERFAMILY SSF103473 10 427 1.57E-55 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3565 7b3d2cafae3249543eb084995e1b7ade 449 Gene3D G3DSA:1.20.1250.20 14 431 4.7E-50 T 23-10-2018 DLM_3565 7b3d2cafae3249543eb084995e1b7ade 449 Pfam PF00083 Sugar (and other) transporter 18 218 6.0E-18 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DLM_0781 adfbe86451f948d441a96d278092fb9e 543 Gene3D G3DSA:3.40.50.300 42 230 2.6E-31 T 23-10-2018 DLM_0781 adfbe86451f948d441a96d278092fb9e 543 PIRSF PIRSF007056 16 537 1.1E-238 T 23-10-2018 IPR012036 Bacteriophage Mu, Gp28 DLM_0730 0d1fd2a9e2c71c872b592ec2c1cf0382 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 125 178 7.2E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DLM_0730 0d1fd2a9e2c71c872b592ec2c1cf0382 219 SUPERFAMILY SSF56784 5 216 1.02E-54 T 23-10-2018 IPR036412 HAD-like superfamily DLM_0730 0d1fd2a9e2c71c872b592ec2c1cf0382 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 182 4.5E-29 T 23-10-2018 DLM_0730 0d1fd2a9e2c71c872b592ec2c1cf0382 219 Gene3D G3DSA:3.40.50.1000 8 207 1.4E-49 T 23-10-2018 IPR023214 HAD superfamily DLM_0730 0d1fd2a9e2c71c872b592ec2c1cf0382 219 Gene3D G3DSA:1.10.150.240 20 85 1.4E-49 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DLM_0808 d11dc385833b818bc38238d227aaca72 442 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 7 423 4.4E-136 T 23-10-2018 IPR017830 Hydroxysqualene dehydroxylase HpnE MetaCyc: PWY-7072 DLM_0808 d11dc385833b818bc38238d227aaca72 442 Pfam PF01593 Flavin containing amine oxidoreductase 15 422 1.7E-26 T 23-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DLM_0808 d11dc385833b818bc38238d227aaca72 442 SUPERFAMILY SSF51905 1 426 1.47E-48 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_0808 d11dc385833b818bc38238d227aaca72 442 Gene3D G3DSA:3.50.50.60 2 432 2.3E-27 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1206 398e49087b3c7c6d58fc1c9d15ca65b7 323 SUPERFAMILY SSF46785 5 114 7.9E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1206 398e49087b3c7c6d58fc1c9d15ca65b7 323 Gene3D G3DSA:1.10.10.10 4 91 1.4E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1206 398e49087b3c7c6d58fc1c9d15ca65b7 323 Pfam PF03466 LysR substrate binding domain 90 295 7.7E-32 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1206 398e49087b3c7c6d58fc1c9d15ca65b7 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.7E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1206 398e49087b3c7c6d58fc1c9d15ca65b7 323 SUPERFAMILY SSF53850 91 296 6.7E-37 T 23-10-2018 DLM_1206 398e49087b3c7c6d58fc1c9d15ca65b7 323 Gene3D G3DSA:3.40.190.10 94 291 1.3E-49 T 23-10-2018 DLM_1206 398e49087b3c7c6d58fc1c9d15ca65b7 323 Gene3D G3DSA:3.40.190.10 165 267 1.3E-49 T 23-10-2018 DLM_1256 46e6838ceea30c06e90094aa75743a34 429 Pfam PF07157 DNA circularisation protein N-terminus 7 91 4.1E-29 T 23-10-2018 IPR009826 DNA circulation, N-terminal DLM_1256 46e6838ceea30c06e90094aa75743a34 429 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 3 128 5.0E-38 T 23-10-2018 IPR009826 DNA circulation, N-terminal DLM_0369 c94357382810edc8ae64f55c2b2728f2 268 Gene3D G3DSA:3.20.20.370 2 268 2.8E-27 T 23-10-2018 DLM_0369 c94357382810edc8ae64f55c2b2728f2 268 Pfam PF04794 YdjC-like protein 5 257 5.6E-45 T 23-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like DLM_0369 c94357382810edc8ae64f55c2b2728f2 268 SUPERFAMILY SSF88713 3 267 7.34E-54 T 23-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DLM_3923 facf521abc094c2bfc226d70807efd03 193 Pfam PF03167 Uracil DNA glycosylase superfamily 31 179 7.0E-23 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3923 facf521abc094c2bfc226d70807efd03 193 SUPERFAMILY SSF52141 6 190 6.05E-52 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3923 facf521abc094c2bfc226d70807efd03 193 SMART SM00987 28 183 3.8E-24 T 23-10-2018 DLM_3923 facf521abc094c2bfc226d70807efd03 193 Gene3D G3DSA:3.40.470.10 2 193 8.5E-66 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_3923 facf521abc094c2bfc226d70807efd03 193 SMART SM00986 28 183 3.8E-24 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DLM_1152 7bb16e8f07dc765eae97330cc3cd9d0a 141 SUPERFAMILY SSF54637 2 136 1.41E-25 T 23-10-2018 IPR029069 HotDog domain superfamily DLM_1152 7bb16e8f07dc765eae97330cc3cd9d0a 141 Pfam PF13279 Thioesterase-like superfamily 20 136 6.2E-17 T 23-10-2018 DLM_1152 7bb16e8f07dc765eae97330cc3cd9d0a 141 Gene3D G3DSA:3.10.129.10 2 140 2.9E-24 T 23-10-2018 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 1 626 41.101 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 Gene3D G3DSA:1.20.58.930 358 453 3.3E-224 T 23-10-2018 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 88 102 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 535 556 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 142 157 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 192 214 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 319 336 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 482 507 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 168 189 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 457 478 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01180 Arginine decarboxylase signature 64 79 1.9E-74 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 Gene3D G3DSA:3.20.20.10 65 344 3.3E-224 T 23-10-2018 IPR029066 PLP-binding barrel DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 8.0E-17 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 8.0E-17 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 8.0E-17 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 535 548 8.0E-17 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 8.0E-17 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 PIRSF PIRSF001336 1 626 2.4E-251 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 625 1.0E-257 T 23-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 73 339 2.5E-42 T 23-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 SUPERFAMILY SSF51419 64 341 1.55E-66 T 23-10-2018 IPR029066 PLP-binding barrel DLM_2430 e137a21d9e64c09fe61162c94019f239 626 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 271 286 - T 23-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DLM_2430 e137a21d9e64c09fe61162c94019f239 626 SUPERFAMILY SSF50621 450 556 1.33E-5 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_2430 e137a21d9e64c09fe61162c94019f239 626 Gene3D G3DSA:2.40.37.10 12 562 3.3E-224 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DLM_2536 3ceaf9a0f4b81e82799974972848d406 341 Pfam PF12833 Helix-turn-helix domain 254 333 9.7E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_2536 3ceaf9a0f4b81e82799974972848d406 341 SMART SM00342 248 332 2.9E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DLM_2536 3ceaf9a0f4b81e82799974972848d406 341 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 285 328 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DLM_2536 3ceaf9a0f4b81e82799974972848d406 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 3.8E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_2536 3ceaf9a0f4b81e82799974972848d406 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 3.8E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DLM_2536 3ceaf9a0f4b81e82799974972848d406 341 Gene3D G3DSA:1.10.10.60 230 338 1.5E-20 T 23-10-2018 DLM_2536 3ceaf9a0f4b81e82799974972848d406 341 SUPERFAMILY SSF46689 286 333 1.25E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1367 a22260cbc8b0c03a9706066bb848b1af 422 Gene3D G3DSA:3.40.50.2300 147 396 4.1E-138 T 23-10-2018 DLM_1367 a22260cbc8b0c03a9706066bb848b1af 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 32 405 5.2E-177 T 23-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like DLM_1367 a22260cbc8b0c03a9706066bb848b1af 422 SUPERFAMILY SSF53822 31 409 1.94E-90 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1367 a22260cbc8b0c03a9706066bb848b1af 422 Gene3D G3DSA:3.40.50.2300 34 376 4.1E-138 T 23-10-2018 DLM_1367 a22260cbc8b0c03a9706066bb848b1af 422 Pfam PF13433 Periplasmic binding protein domain 32 408 1.1E-170 T 23-10-2018 DLM_1548 ef3b8acea1d39af97fc0ec91044c385b 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 256 2.1E-4 T 23-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DLM_1548 ef3b8acea1d39af97fc0ec91044c385b 260 Pfam PF00005 ABC transporter 25 185 4.1E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_1548 ef3b8acea1d39af97fc0ec91044c385b 260 SMART SM00382 33 234 1.5E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_1548 ef3b8acea1d39af97fc0ec91044c385b 260 SUPERFAMILY SSF52540 7 257 1.15E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1548 ef3b8acea1d39af97fc0ec91044c385b 260 Gene3D G3DSA:3.40.50.300 1 258 9.7E-60 T 23-10-2018 DLM_1356 e8d596f03d28dac3c1def1f5a88f136e 363 SUPERFAMILY SSF81345 23 357 5.75E-69 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_1356 e8d596f03d28dac3c1def1f5a88f136e 363 Pfam PF01032 FecCD transport family 40 357 2.1E-74 T 23-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DLM_1356 e8d596f03d28dac3c1def1f5a88f136e 363 Gene3D G3DSA:1.10.3470.10 27 362 1.4E-85 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_1450 4470649b6e63c74480c4661a7950eb34 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 22.432 T 23-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DLM_1450 4470649b6e63c74480c4661a7950eb34 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 2.1E-32 T 23-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DLM_1450 4470649b6e63c74480c4661a7950eb34 126 SUPERFAMILY SSF56214 1 124 8.11E-25 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DLM_1450 4470649b6e63c74480c4661a7950eb34 126 Gene3D G3DSA:3.90.470.20 1 125 5.0E-33 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DLM_1450 4470649b6e63c74480c4661a7950eb34 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 125 6.7E-24 T 23-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DLM_1450 4470649b6e63c74480c4661a7950eb34 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 124 4.0E-27 T 23-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DLM_1450 4470649b6e63c74480c4661a7950eb34 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 107 3.3E-14 T 23-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DLM_1230 12a3d4d7b3c80d28606692cba326e7ed 411 Pfam PF01584 CheW-like domain 268 404 6.9E-9 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1230 12a3d4d7b3c80d28606692cba326e7ed 411 Pfam PF01584 CheW-like domain 88 204 4.2E-10 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_1230 12a3d4d7b3c80d28606692cba326e7ed 411 SUPERFAMILY SSF50341 265 359 1.14E-7 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_1230 12a3d4d7b3c80d28606692cba326e7ed 411 SUPERFAMILY SSF50341 84 204 9.55E-12 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_2708 05a313fac4af1efefbe98d2d99bf3553 113 SUPERFAMILY SSF51306 6 111 1.26E-23 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DLM_2708 05a313fac4af1efefbe98d2d99bf3553 113 Gene3D G3DSA:2.10.109.10 4 113 9.6E-14 T 23-10-2018 DLM_2708 05a313fac4af1efefbe98d2d99bf3553 113 Pfam PF00717 Peptidase S24-like 27 92 1.4E-12 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DLM_1992 bbe5c604e14c0a4e305f97f5713bb33f 379 Gene3D G3DSA:3.40.50.12740 4 193 3.4E-40 T 23-10-2018 DLM_1992 bbe5c604e14c0a4e305f97f5713bb33f 379 SMART SM00448 5 118 7.5E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1992 bbe5c604e14c0a4e305f97f5713bb33f 379 Pfam PF00072 Response regulator receiver domain 7 118 2.2E-20 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1992 bbe5c604e14c0a4e305f97f5713bb33f 379 SUPERFAMILY SSF52172 2 129 4.27E-33 T 23-10-2018 IPR011006 CheY-like superfamily DLM_0407 a2824655b48b241d55bd9d8df65ee382 445 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 43 423 2.7E-148 T 23-10-2018 IPR013397 CRISPR-associated protein Csy1 DLM_0407 a2824655b48b241d55bd9d8df65ee382 445 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 42 432 3.3E-145 T 23-10-2018 IPR013397 CRISPR-associated protein Csy1 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 Gene3D G3DSA:3.10.290.10 2 58 1.8E-9 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 Pfam PF00849 RNA pseudouridylate synthase 64 195 4.6E-13 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 Gene3D G3DSA:3.30.70.1560 131 212 1.1E-50 T 23-10-2018 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 225 3.0E-40 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 SUPERFAMILY SSF55174 6 83 3.36E-7 T 23-10-2018 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 SUPERFAMILY SSF55120 63 229 2.24E-38 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 Pfam PF01479 S4 domain 6 37 6.6E-6 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 Gene3D G3DSA:3.30.70.580 64 228 1.1E-50 T 23-10-2018 DLM_3839 36dfcfebcf5ba837ca1588008ef78b47 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 23-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DLM_0419 55a4b4dfa858c6da474a1ecc74ef1e45 216 SUPERFAMILY SSF52540 4 204 6.93E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0419 55a4b4dfa858c6da474a1ecc74ef1e45 216 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 182 6.0E-15 T 23-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DLM_0419 55a4b4dfa858c6da474a1ecc74ef1e45 216 Gene3D G3DSA:3.40.50.300 4 208 2.9E-36 T 23-10-2018 DLM_0419 55a4b4dfa858c6da474a1ecc74ef1e45 216 PIRSF PIRSF009320 2 201 7.8E-25 T 23-10-2018 DLM_1658 736d96e1e697b7764e548ffb4ffdd8b7 477 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 105 1.2E-18 T 23-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DLM_1658 736d96e1e697b7764e548ffb4ffdd8b7 477 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 238 453 2.9E-40 T 23-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 DLM_3717 f770aacc6b8dde1c40ce915c0e72ffe8 364 Pfam PF02628 Cytochrome oxidase assembly protein 20 319 6.8E-63 T 23-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PIRSF PIRSF019574 1 364 1.5E-110 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 SUPERFAMILY SSF53850 26 362 1.0E-91 T 23-10-2018 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 103 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 1.4E-55 T 23-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 Gene3D G3DSA:3.40.190.10 132 360 5.3E-117 T 23-10-2018 DLM_1572 ad08483104e02d23276a7b354a9c4681 364 Pfam PF13416 Bacterial extracellular solute-binding protein 44 326 2.1E-33 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_1572 ad08483104e02d23276a7b354a9c4681 364 Gene3D G3DSA:3.40.190.10 29 331 5.3E-117 T 23-10-2018 DLM_3721 226c434d79eaa64e8f21614835170755 287 SUPERFAMILY SSF81452 11 287 1.09E-74 T 23-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3721 226c434d79eaa64e8f21614835170755 287 Gene3D G3DSA:1.10.287.70 6 75 1.1E-15 T 23-10-2018 DLM_3721 226c434d79eaa64e8f21614835170755 287 Gene3D G3DSA:1.20.120.80 76 287 4.0E-60 T 23-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3721 226c434d79eaa64e8f21614835170755 287 Pfam PF00510 Cytochrome c oxidase subunit III 13 286 7.9E-56 T 23-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_4396 88182600cd1a43665c4366069f847ecf 109 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 5.1E-35 T 23-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DLM_4396 88182600cd1a43665c4366069f847ecf 109 SUPERFAMILY SSF54843 2 108 6.54E-39 T 23-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4396 88182600cd1a43665c4366069f847ecf 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.2E-45 T 23-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_4396 88182600cd1a43665c4366069f847ecf 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4396 88182600cd1a43665c4366069f847ecf 109 Gene3D G3DSA:3.90.470.10 1 109 2.4E-43 T 23-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DLM_4396 88182600cd1a43665c4366069f847ecf 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.663 T 23-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_1596 cf4b75a853ecca19cf131d657c375afb 338 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 17 147 2.2E-20 T 23-10-2018 IPR017748 T6S-associated protein TagF DLM_1596 cf4b75a853ecca19cf131d657c375afb 338 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 17 147 3.7E-23 T 23-10-2018 IPR017748 T6S-associated protein TagF DLM_1596 cf4b75a853ecca19cf131d657c375afb 338 Gene3D G3DSA:3.40.1730.10 13 215 5.4E-18 T 23-10-2018 IPR038225 T6S-associated protein TagF superfamily DLM_1022 fd73fe7b71a500e68b9dbf1d3bced546 171 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 5.3E-58 T 23-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 DLM_1022 fd73fe7b71a500e68b9dbf1d3bced546 171 SUPERFAMILY SSF52540 4 167 1.76E-24 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1022 fd73fe7b71a500e68b9dbf1d3bced546 171 Pfam PF01202 Shikimate kinase 13 134 4.0E-9 T 23-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DLM_1022 fd73fe7b71a500e68b9dbf1d3bced546 171 Gene3D G3DSA:3.40.50.300 4 170 2.5E-58 T 23-10-2018 DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 SMART SM00829 12 338 5.1E-5 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 Gene3D G3DSA:3.90.180.10 21 328 1.2E-121 T 23-10-2018 DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 Pfam PF00107 Zinc-binding dehydrogenase 174 298 2.8E-28 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 SUPERFAMILY SSF50129 1 173 4.72E-52 T 23-10-2018 IPR011032 GroES-like superfamily DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 9.5E-31 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.5E-168 T 23-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 59.957 T 23-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 SUPERFAMILY SSF51735 141 305 4.6E-38 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_3012 46bbe4e6ee70db72f936a7f2cddd5a72 341 Gene3D G3DSA:3.40.50.720 153 286 1.2E-121 T 23-10-2018 DLM_3181 f6163258e082d2c825d3a0ecd2c04d16 204 Pfam PF00578 AhpC/TSA family 5 143 9.5E-28 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_3181 f6163258e082d2c825d3a0ecd2c04d16 204 SUPERFAMILY SSF52833 4 198 4.94E-60 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3181 f6163258e082d2c825d3a0ecd2c04d16 204 PIRSF PIRSF000239 1 203 6.6E-55 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_3181 f6163258e082d2c825d3a0ecd2c04d16 204 Gene3D G3DSA:3.40.30.10 1 201 1.3E-67 T 23-10-2018 DLM_3181 f6163258e082d2c825d3a0ecd2c04d16 204 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 197 1.1E-12 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_2252 168f47e7c520515217cbec4df0e0f65c 280 Pfam PF01738 Dienelactone hydrolase family 53 274 3.2E-69 T 23-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 DLM_2252 168f47e7c520515217cbec4df0e0f65c 280 SUPERFAMILY SSF53474 46 275 6.93E-47 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2252 168f47e7c520515217cbec4df0e0f65c 280 Gene3D G3DSA:3.40.50.1820 43 274 3.4E-65 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2902 396cd24fdd553d576f52959a4d5451b1 145 Pfam PF00583 Acetyltransferase (GNAT) family 60 118 8.8E-12 T 23-10-2018 IPR000182 GNAT domain DLM_2902 396cd24fdd553d576f52959a4d5451b1 145 SUPERFAMILY SSF55729 5 144 5.83E-25 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_2902 396cd24fdd553d576f52959a4d5451b1 145 Gene3D G3DSA:3.40.630.30 1 145 3.4E-32 T 23-10-2018 DLM_2902 396cd24fdd553d576f52959a4d5451b1 145 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 25 141 8.4E-28 T 23-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DLM_2694 983d232a6425d706f3b664572bbc397a 135 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 8 69 7.9E-6 T 23-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 DLM_2694 983d232a6425d706f3b664572bbc397a 135 SUPERFAMILY SSF55166 5 130 1.57E-20 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DLM_2694 983d232a6425d706f3b664572bbc397a 135 Gene3D G3DSA:3.30.1380.10 1 130 3.6E-28 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DLM_2760 9233fffd736f8f1d86fa8a6fa13d9d70 610 SMART SM00327 418 602 1.1E-13 T 23-10-2018 IPR002035 von Willebrand factor, type A DLM_2760 9233fffd736f8f1d86fa8a6fa13d9d70 610 SUPERFAMILY SSF53300 424 606 1.21E-17 T 23-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DLM_2760 9233fffd736f8f1d86fa8a6fa13d9d70 610 Gene3D G3DSA:3.40.50.410 417 604 1.9E-11 T 23-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DLM_4484 6a959968392355c8c8a55bb8f7c0c0d6 283 Pfam PF04333 MlaA lipoprotein 32 225 9.3E-69 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DLM_4484 6a959968392355c8c8a55bb8f7c0c0d6 283 PRINTS PR01805 VacJ lipoprotein signature 32 45 3.7E-25 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DLM_4484 6a959968392355c8c8a55bb8f7c0c0d6 283 PRINTS PR01805 VacJ lipoprotein signature 49 65 3.7E-25 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DLM_4484 6a959968392355c8c8a55bb8f7c0c0d6 283 PRINTS PR01805 VacJ lipoprotein signature 100 117 3.7E-25 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DLM_4484 6a959968392355c8c8a55bb8f7c0c0d6 283 PRINTS PR01805 VacJ lipoprotein signature 136 153 3.7E-25 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DLM_3063 58a3bb8c10c1b91175ff361391ae8b1a 170 PIRSF PIRSF030820 1 169 1.7E-52 T 23-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 DLM_3063 58a3bb8c10c1b91175ff361391ae8b1a 170 Pfam PF06073 Bacterial protein of unknown function (DUF934) 57 163 1.9E-37 T 23-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 DLM_4128 77110b94b41642dc4060236f89e49310 302 Pfam PF00892 EamA-like transporter family 15 145 5.8E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_4128 77110b94b41642dc4060236f89e49310 302 Pfam PF00892 EamA-like transporter family 155 289 8.6E-18 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_4128 77110b94b41642dc4060236f89e49310 302 SUPERFAMILY SSF103481 204 295 2.48E-15 T 23-10-2018 DLM_4128 77110b94b41642dc4060236f89e49310 302 SUPERFAMILY SSF103481 48 146 2.35E-6 T 23-10-2018 DLM_3282 1c0350bfbbbc35e3ca6a577f69d4f5c8 152 Pfam PF03358 NADPH-dependent FMN reductase 42 124 3.5E-8 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DLM_3282 1c0350bfbbbc35e3ca6a577f69d4f5c8 152 SUPERFAMILY SSF52218 1 135 3.38E-23 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_3282 1c0350bfbbbc35e3ca6a577f69d4f5c8 152 Gene3D G3DSA:3.40.50.360 1 148 4.1E-19 T 23-10-2018 IPR029039 Flavoprotein-like superfamily DLM_4217 3ef8a881f3c10cbe2957715b96bd6151 246 Gene3D G3DSA:3.30.2010.10 59 144 2.9E-9 T 23-10-2018 DLM_4217 3ef8a881f3c10cbe2957715b96bd6151 246 Pfam PF01435 Peptidase family M48 86 242 8.8E-24 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DLM_3033 ad266d6e1ab9f04fbb7f38950bc317f4 319 SUPERFAMILY SSF53822 34 284 5.18E-17 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_3033 ad266d6e1ab9f04fbb7f38950bc317f4 319 Gene3D G3DSA:3.40.50.2300 140 312 9.2E-86 T 23-10-2018 DLM_3033 ad266d6e1ab9f04fbb7f38950bc317f4 319 Gene3D G3DSA:3.40.50.2300 38 289 9.2E-86 T 23-10-2018 DLM_3033 ad266d6e1ab9f04fbb7f38950bc317f4 319 Pfam PF04392 ABC transporter substrate binding protein 27 316 6.7E-100 T 23-10-2018 IPR007487 ABC transporter, substrate-binding protein DLM_1425 4f588744624f9511b540b39ca3e68138 70 Gene3D G3DSA:1.10.10.10 4 65 1.4E-8 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1425 4f588744624f9511b540b39ca3e68138 70 SUPERFAMILY SSF88659 14 61 3.92E-7 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DLM_0194 5aff014444204f4fe03557d27ed2b2b2 266 Pfam PF02754 Cysteine-rich domain 19 97 1.9E-11 T 23-10-2018 IPR004017 Cysteine-rich domain DLM_0194 5aff014444204f4fe03557d27ed2b2b2 266 Pfam PF02754 Cysteine-rich domain 145 239 2.2E-12 T 23-10-2018 IPR004017 Cysteine-rich domain DLM_3476 ed4ea145f7368f74307d59b30f4b9bfc 1081 Pfam PF06761 Intracellular multiplication and human macrophage-killing 379 686 5.4E-57 T 23-10-2018 IPR009612 ImcF-related DLM_3476 ed4ea145f7368f74307d59b30f4b9bfc 1081 Pfam PF06744 Type VI secretion protein IcmF C-terminal 814 1012 1.6E-45 T 23-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal DLM_3686 c4868e6a96c08a1dd2e8f87b8650c851 356 PIRSF PIRSF000654 35 296 7.3E-21 T 23-10-2018 DLM_3686 c4868e6a96c08a1dd2e8f87b8650c851 356 Gene3D G3DSA:3.30.200.20 1 84 1.8E-19 T 23-10-2018 DLM_3686 c4868e6a96c08a1dd2e8f87b8650c851 356 Gene3D G3DSA:1.10.510.10 85 298 4.3E-42 T 23-10-2018 DLM_3686 c4868e6a96c08a1dd2e8f87b8650c851 356 SMART SM00220 10 279 9.4E-53 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DLM_3686 c4868e6a96c08a1dd2e8f87b8650c851 356 SUPERFAMILY SSF56112 4 284 1.03E-60 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_3686 c4868e6a96c08a1dd2e8f87b8650c851 356 Pfam PF00069 Protein kinase domain 10 278 4.9E-47 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DLM_3686 c4868e6a96c08a1dd2e8f87b8650c851 356 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 124 136 - T 23-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 DLM_3795 56a7993bbdc8176e3628e4d6357b2deb 185 Gene3D G3DSA:3.30.160.150 20 168 1.7E-44 T 23-10-2018 DLM_3795 56a7993bbdc8176e3628e4d6357b2deb 185 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 165 18.712 T 23-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DLM_3795 56a7993bbdc8176e3628e4d6357b2deb 185 Pfam PF04390 Lipopolysaccharide-assembly 48 160 5.0E-9 T 23-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DLM_1736 f0c803a291606f16cbd18f267f2c814d 167 Gene3D G3DSA:3.90.960.10 1 164 1.1E-44 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_1736 f0c803a291606f16cbd18f267f2c814d 167 Pfam PF04073 Aminoacyl-tRNA editing domain 23 149 1.7E-24 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DLM_1736 f0c803a291606f16cbd18f267f2c814d 167 SUPERFAMILY SSF55826 1 162 9.03E-39 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 2.6E-258 T 23-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 Pfam PF01380 SIS domain 297 416 1.0E-27 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 Pfam PF01380 SIS domain 462 591 1.6E-25 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 SUPERFAMILY SSF56235 2 234 5.49E-72 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 Gene3D G3DSA:3.60.20.10 2 241 2.1E-75 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 SUPERFAMILY SSF53697 245 609 5.2E-107 T 23-10-2018 DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 Gene3D G3DSA:3.40.50.10490 447 594 6.4E-140 T 23-10-2018 DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 Pfam PF13522 Glutamine amidotransferase domain 63 191 4.1E-19 T 23-10-2018 DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 Gene3D G3DSA:3.40.50.10490 249 608 6.4E-140 T 23-10-2018 DLM_3656 70a9b87a7698f01274bb17383d3cd458 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.184 T 23-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DLM_0210 0c9cc35ceea77733647544eb1803ea44 548 SUPERFAMILY SSF58104 250 507 1.44E-55 T 23-10-2018 DLM_0210 0c9cc35ceea77733647544eb1803ea44 548 Gene3D G3DSA:1.10.287.950 226 508 1.3E-64 T 23-10-2018 DLM_0210 0c9cc35ceea77733647544eb1803ea44 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 492 5.1E-33 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0210 0c9cc35ceea77733647544eb1803ea44 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 5.3E-28 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0210 0c9cc35ceea77733647544eb1803ea44 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 5.3E-28 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0210 0c9cc35ceea77733647544eb1803ea44 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 5.3E-28 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0210 0c9cc35ceea77733647544eb1803ea44 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 5.3E-28 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0210 0c9cc35ceea77733647544eb1803ea44 548 SMART SM00283 273 506 2.9E-65 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 Pfam PF00375 Sodium:dicarboxylate symporter family 7 401 6.2E-110 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 Gene3D G3DSA:1.10.3860.10 1 418 2.1E-118 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 3.3E-40 T 23-10-2018 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 3.3E-40 T 23-10-2018 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 3.3E-40 T 23-10-2018 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.3E-40 T 23-10-2018 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 3.3E-40 T 23-10-2018 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 3.3E-40 T 23-10-2018 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 3.3E-40 T 23-10-2018 DLM_0137 9a3d0f5f2cdcc97d57652640a2941a34 422 SUPERFAMILY SSF118215 7 402 1.57E-110 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DLM_2008 0f318372731e54db0136ef6769c413c9 383 Pfam PF01061 ABC-2 type transporter 191 347 3.5E-26 T 23-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DLM_0262 d78bb2e74744a2e95ebffed8072c8ba7 703 Pfam PF05170 AsmA family 4 356 4.2E-20 T 23-10-2018 IPR007844 AsmA DLM_0262 d78bb2e74744a2e95ebffed8072c8ba7 703 Pfam PF13502 AsmA-like C-terminal region 461 646 6.6E-24 T 23-10-2018 IPR032712 AsmA-like, C-terminal DLM_1097 c94a0c1f0f259b4734e10b940fcf38a9 614 SUPERFAMILY SSF54534 245 348 3.27E-32 T 23-10-2018 DLM_1097 c94a0c1f0f259b4734e10b940fcf38a9 614 Pfam PF13624 SurA N-terminal domain 1 143 8.1E-31 T 23-10-2018 DLM_1097 c94a0c1f0f259b4734e10b940fcf38a9 614 Gene3D G3DSA:1.10.4030.30 221 370 9.8E-42 T 23-10-2018 DLM_1097 c94a0c1f0f259b4734e10b940fcf38a9 614 SUPERFAMILY SSF109998 37 277 7.45E-32 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily DLM_1097 c94a0c1f0f259b4734e10b940fcf38a9 614 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 288 309 - T 23-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DLM_1097 c94a0c1f0f259b4734e10b940fcf38a9 614 Gene3D G3DSA:3.10.50.40 247 351 9.8E-42 T 23-10-2018 DLM_1097 c94a0c1f0f259b4734e10b940fcf38a9 614 Pfam PF00639 PPIC-type PPIASE domain 253 348 1.1E-30 T 23-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DLM_1097 c94a0c1f0f259b4734e10b940fcf38a9 614 Pfam PF13145 PPIC-type PPIASE domain 351 473 7.0E-8 T 23-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DLM_3465 a56097b042ad83b145fca804b70d2e56 166 SUPERFAMILY SSF55729 5 162 2.05E-14 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3465 a56097b042ad83b145fca804b70d2e56 166 Gene3D G3DSA:3.40.630.30 3 158 5.6E-13 T 23-10-2018 DLM_4430 a84f0d94072d15d0af7e31002587ba40 132 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 132 30.371 T 23-10-2018 IPR023064 D-ribose pyranase GO:0016872 DLM_4430 a84f0d94072d15d0af7e31002587ba40 132 SUPERFAMILY SSF102546 1 132 3.27E-43 T 23-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DLM_4430 a84f0d94072d15d0af7e31002587ba40 132 Pfam PF05025 RbsD / FucU transport protein family 1 131 5.2E-45 T 23-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DLM_4430 a84f0d94072d15d0af7e31002587ba40 132 Gene3D G3DSA:3.40.1650.10 8 129 1.2E-36 T 23-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DLM_2265 42211d7184d0868439e82eb5323c7c56 455 Pfam PF01966 HD domain 78 152 3.5E-8 T 23-10-2018 IPR006674 HD domain DLM_2265 42211d7184d0868439e82eb5323c7c56 455 Pfam PF13286 Phosphohydrolase-associated domain 346 447 7.5E-5 T 23-10-2018 IPR026875 Phosphohydrolase-associated domain DLM_2265 42211d7184d0868439e82eb5323c7c56 455 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 41 447 4.6E-93 T 23-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DLM_2265 42211d7184d0868439e82eb5323c7c56 455 SMART SM00471 74 272 2.1E-9 T 23-10-2018 IPR003607 HD/PDEase domain DLM_2265 42211d7184d0868439e82eb5323c7c56 455 SUPERFAMILY SSF109604 39 444 1.57E-59 T 23-10-2018 DLM_2265 42211d7184d0868439e82eb5323c7c56 455 Gene3D G3DSA:1.10.3410.10 256 363 8.1E-136 T 23-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 DLM_2265 42211d7184d0868439e82eb5323c7c56 455 Gene3D G3DSA:1.10.3550.10 131 442 8.1E-136 T 23-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal DLM_2265 42211d7184d0868439e82eb5323c7c56 455 Gene3D G3DSA:1.10.3210.10 43 255 8.1E-136 T 23-10-2018 DLM_1962 baa60dd67e4a28628ec659ce6e5e4c69 203 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 191 37.259 T 23-10-2018 IPR022898 Ribonuclease HII GO:0004523 DLM_1962 baa60dd67e4a28628ec659ce6e5e4c69 203 Pfam PF01351 Ribonuclease HII 13 188 3.9E-38 T 23-10-2018 IPR024567 Ribonuclease HII/HIII domain DLM_1962 baa60dd67e4a28628ec659ce6e5e4c69 203 Gene3D G3DSA:3.30.420.10 2 202 1.0E-70 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1962 baa60dd67e4a28628ec659ce6e5e4c69 203 SUPERFAMILY SSF53098 8 196 2.28E-64 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_3971 ba4fe8653ad3d8c31a710e28dd96c108 219 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 23-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DLM_3971 ba4fe8653ad3d8c31a710e28dd96c108 219 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 197 8.9E-36 T 23-10-2018 DLM_3971 ba4fe8653ad3d8c31a710e28dd96c108 219 SUPERFAMILY SSF53335 1 178 1.07E-45 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3971 ba4fe8653ad3d8c31a710e28dd96c108 219 Gene3D G3DSA:3.40.50.150 1 213 2.7E-50 T 23-10-2018 DLM_3556 3e573561edb4566dd5b089e38a4d6d49 200 Pfam PF07021 Methionine biosynthesis protein MetW 8 195 3.1E-77 T 23-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 DLM_3556 3e573561edb4566dd5b089e38a4d6d49 200 SUPERFAMILY SSF53335 8 175 3.41E-27 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3556 3e573561edb4566dd5b089e38a4d6d49 200 Gene3D G3DSA:3.40.50.150 11 185 2.0E-24 T 23-10-2018 DLM_3556 3e573561edb4566dd5b089e38a4d6d49 200 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 8 195 1.0E-80 T 23-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 DLM_3963 715ae039a362612b94009a2ec1cc5629 154 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 144 1.3E-37 T 23-10-2018 IPR006750 Putative inner membrane exporter, YdcZ DLM_3365 6e897c6d3e750a32d0dfb6765b9f7e67 253 Pfam PF02167 Cytochrome C1 family 36 252 5.4E-23 T 23-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DLM_3365 6e897c6d3e750a32d0dfb6765b9f7e67 253 Gene3D G3DSA:1.10.760.10 29 217 1.4E-21 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_3365 6e897c6d3e750a32d0dfb6765b9f7e67 253 SUPERFAMILY SSF46626 26 216 4.6E-52 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_1002 b5dd6b058647c4a5914d6c9244a0c5ae 415 Pfam PF13378 Enolase C-terminal domain-like 147 373 4.0E-60 T 23-10-2018 IPR029065 Enolase C-terminal domain-like DLM_1002 b5dd6b058647c4a5914d6c9244a0c5ae 415 SUPERFAMILY SSF54826 1 120 4.82E-28 T 23-10-2018 DLM_1002 b5dd6b058647c4a5914d6c9244a0c5ae 415 SUPERFAMILY SSF51604 106 378 4.72E-78 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_1002 b5dd6b058647c4a5914d6c9244a0c5ae 415 SMART SM00922 145 254 1.0E-19 T 23-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DLM_1002 b5dd6b058647c4a5914d6c9244a0c5ae 415 Gene3D G3DSA:3.20.20.120 112 366 5.2E-134 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DLM_1002 b5dd6b058647c4a5914d6c9244a0c5ae 415 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 23 118 1.4E-12 T 23-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DLM_1002 b5dd6b058647c4a5914d6c9244a0c5ae 415 Gene3D G3DSA:3.30.390.10 6 376 5.2E-134 T 23-10-2018 IPR029017 Enolase-like, N-terminal DLM_2377 11b5f1cf639c1c06671cb1d9de436196 124 PIRSF PIRSF009151 1 122 7.5E-47 T 23-10-2018 IPR008497 Protein of unknown function DUF779 DLM_2377 11b5f1cf639c1c06671cb1d9de436196 124 Pfam PF05610 Protein of unknown function (DUF779) 14 107 2.4E-39 T 23-10-2018 IPR008497 Protein of unknown function DUF779 DLM_1463 3bb0e6c8ba40e2a8eaed4cb5f23beef4 289 SUPERFAMILY SSF103481 48 147 9.68E-14 T 23-10-2018 DLM_1463 3bb0e6c8ba40e2a8eaed4cb5f23beef4 289 Pfam PF00892 EamA-like transporter family 14 144 1.9E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_1463 3bb0e6c8ba40e2a8eaed4cb5f23beef4 289 SUPERFAMILY SSF103481 189 288 1.44E-9 T 23-10-2018 DLM_4206 dfe8032bc1a001b692f433738a0423b3 132 Gene3D G3DSA:1.20.1270.180 18 130 2.1E-27 T 23-10-2018 DLM_4206 dfe8032bc1a001b692f433738a0423b3 132 Pfam PF07007 Lysozyme inhibitor LprI 23 115 2.4E-20 T 23-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal DLM_4206 dfe8032bc1a001b692f433738a0423b3 132 ProDom PD498860 RC0070 99 129 0.002 T 23-10-2018 DLM_2329 dbf3298547a783c6cf2607bc2dd1c3ee 126 Gene3D G3DSA:3.40.1590.10 1 126 3.3E-50 T 23-10-2018 IPR037891 Immunity protein Cdil-like superfamily DLM_2329 dbf3298547a783c6cf2607bc2dd1c3ee 126 Pfam PF07262 CDI immunity protein 1 125 4.4E-39 T 23-10-2018 IPR009888 Immunity protein CdiI DLM_2329 dbf3298547a783c6cf2607bc2dd1c3ee 126 SUPERFAMILY SSF160207 1 126 4.71E-46 T 23-10-2018 IPR037891 Immunity protein Cdil-like superfamily DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1581 1685 1.1E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1908 2012 2.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2017 2121 9.4E-8 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2671 2775 1.9E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 600 704 1.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2126 2230 2.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1254 1358 3.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2889 2993 1.9E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2998 3102 2.7E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 381 485 7.0E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2235 2339 2.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2562 2666 2.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2453 2557 2.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1690 1794 1.9E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 818 922 3.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2780 2884 2.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 3515 3619 4.6E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 2344 2448 9.4E-8 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1363 1467 1.9E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 709 813 1.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1472 1576 2.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1036 1140 1.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1799 1903 9.4E-8 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 3620 3720 1.1E-19 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 927 1031 1.9E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 1145 1249 1.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 487 586 2.0E-13 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4089 4191 4.6E-16 T 23-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 SUPERFAMILY SSF51120 4019 4152 4.39E-7 T 23-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Gene3D G3DSA:2.60.40.10 158 260 8.5E-11 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Pfam PF12245 Bacterial Ig-like domain (group 3) 455 480 0.15 T 23-10-2018 IPR022038 Bacterial Ig-like domain DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Pfam PF12245 Bacterial Ig-like domain (group 3) 3358 3381 0.6 T 23-10-2018 IPR022038 Bacterial Ig-like domain DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Pfam PF12245 Bacterial Ig-like domain (group 3) 3588 3613 0.015 T 23-10-2018 IPR022038 Bacterial Ig-like domain DLM_3695 ab48b34cd58e40d01cf3dc648a4242fa 4193 Pfam PF07691 PA14 domain 3201 3269 6.2E-6 T 23-10-2018 IPR011658 PA14 domain DLM_2672 92ba2603d3984bf0f4abe7948be6e5fe 689 Pfam PF10145 Phage-related minor tail protein 185 354 1.6E-21 T 23-10-2018 IPR010090 Phage tail tape measure protein DLM_1665 bda638f62f1ae169ec6f66649f6ab4bf 216 Pfam PF03692 Putative zinc- or iron-chelating domain 63 144 5.9E-8 T 23-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DLM_4117 f438de7f4821a1d8cb9aca5bec5d086a 98 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 9 95 3.2E-38 T 23-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DLM_4214 9787471945fed58752d6a734b1c38a90 306 SUPERFAMILY SSF161098 88 292 1.96E-18 T 23-10-2018 IPR035906 MetI-like superfamily DLM_4214 9787471945fed58752d6a734b1c38a90 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 3.9E-34 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_4214 9787471945fed58752d6a734b1c38a90 306 Gene3D G3DSA:1.10.3720.10 85 299 9.3E-19 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0675 d360f9e82b7f3b3d05e19b85fec1302f 458 Gene3D G3DSA:1.20.1250.20 19 452 3.7E-54 T 23-10-2018 DLM_0675 d360f9e82b7f3b3d05e19b85fec1302f 458 Pfam PF00083 Sugar (and other) transporter 69 447 6.4E-22 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DLM_0675 d360f9e82b7f3b3d05e19b85fec1302f 458 SUPERFAMILY SSF103473 21 445 1.7E-57 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1494 1794e8bab187cec95260aea24fee3086 367 Gene3D G3DSA:1.10.287.950 8 268 4.4E-47 T 23-10-2018 DLM_1494 1794e8bab187cec95260aea24fee3086 367 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 71 100 4.4E-6 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1494 1794e8bab187cec95260aea24fee3086 367 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 170 199 4.4E-6 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_1494 1794e8bab187cec95260aea24fee3086 367 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 112 235 5.2E-34 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1494 1794e8bab187cec95260aea24fee3086 367 Pfam PF13682 Chemoreceptor zinc-binding domain 264 327 1.5E-11 T 23-10-2018 IPR025991 Chemoreceptor zinc-binding domain DLM_1494 1794e8bab187cec95260aea24fee3086 367 SUPERFAMILY SSF58104 49 261 2.22E-48 T 23-10-2018 DLM_1494 1794e8bab187cec95260aea24fee3086 367 SMART SM00283 36 266 2.7E-24 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0720 ff6911a64a876affa20bde6ff6f4bcf1 135 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 115 27.538 T 23-10-2018 IPR026592 Outer membrane protein assembly factor BamE DLM_0720 ff6911a64a876affa20bde6ff6f4bcf1 135 Pfam PF04355 SmpA / OmlA family 34 103 9.8E-26 T 23-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 DLM_0720 ff6911a64a876affa20bde6ff6f4bcf1 135 Gene3D G3DSA:3.30.1450.10 40 114 1.3E-27 T 23-10-2018 IPR037873 BamE-like DLM_0890 728844ce638dd61a4d53fcf8ad8206ae 91 SMART SM00411 1 90 1.7E-26 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0890 728844ce638dd61a4d53fcf8ad8206ae 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.0E-28 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0890 728844ce638dd61a4d53fcf8ad8206ae 91 SUPERFAMILY SSF47729 1 90 2.21E-26 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_0890 728844ce638dd61a4d53fcf8ad8206ae 91 Gene3D G3DSA:4.10.520.10 1 91 6.1E-31 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DLM_0890 728844ce638dd61a4d53fcf8ad8206ae 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 8.6E-9 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0890 728844ce638dd61a4d53fcf8ad8206ae 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 8.6E-9 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_0890 728844ce638dd61a4d53fcf8ad8206ae 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 8.6E-9 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DLM_2775 4d32b447a1a2a64a85bc11b327572826 398 Pfam PF05940 NnrS protein 9 392 5.4E-62 T 23-10-2018 IPR010266 NnrS DLM_2231 18a051ff3fd3df6473a7922e76ccb627 220 Pfam PF11745 Protein of unknown function (DUF3304) 102 189 3.9E-20 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_0209 867aed315b87ccb8c45673277896febd 194 Gene3D G3DSA:2.40.50.180 46 115 4.7E-27 T 23-10-2018 DLM_0209 867aed315b87ccb8c45673277896febd 194 SUPERFAMILY SSF50341 24 165 3.14E-27 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DLM_0209 867aed315b87ccb8c45673277896febd 194 SMART SM00260 23 163 4.5E-16 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0209 867aed315b87ccb8c45673277896febd 194 Pfam PF01584 CheW-like domain 27 163 4.4E-27 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DLM_0209 867aed315b87ccb8c45673277896febd 194 Gene3D G3DSA:2.30.30.40 31 157 4.7E-27 T 23-10-2018 DLM_3577 9d25997e6ff0a0cda052261284f4c883 164 Pfam PF12802 MarR family 58 111 1.1E-8 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3577 9d25997e6ff0a0cda052261284f4c883 164 SMART SM00347 46 148 1.2E-19 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3577 9d25997e6ff0a0cda052261284f4c883 164 SUPERFAMILY SSF46785 25 162 6.16E-29 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3577 9d25997e6ff0a0cda052261284f4c883 164 Gene3D G3DSA:1.10.10.10 6 163 3.0E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3577 9d25997e6ff0a0cda052261284f4c883 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 1.4E-15 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3577 9d25997e6ff0a0cda052261284f4c883 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.4E-15 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3577 9d25997e6ff0a0cda052261284f4c883 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.4E-15 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3577 9d25997e6ff0a0cda052261284f4c883 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.4E-15 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_4157 5b0f54191f9b9ebef2ee648702457b71 380 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 141 378 4.5E-71 T 23-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 DLM_4157 5b0f54191f9b9ebef2ee648702457b71 380 Pfam PF01578 Cytochrome C assembly protein 171 375 1.5E-47 T 23-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DLM_1114 01c04aa027d2d060ebb0d4ab1920f593 531 Pfam PF13520 Amino acid permease 52 493 7.9E-47 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_1114 01c04aa027d2d060ebb0d4ab1920f593 531 PIRSF PIRSF006060 24 531 2.1E-56 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_1114 01c04aa027d2d060ebb0d4ab1920f593 531 Gene3D G3DSA:1.20.1740.10 51 507 2.6E-33 T 23-10-2018 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 SUPERFAMILY SSF55620 11 83 7.78E-5 T 23-10-2018 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 114 217 1.2E-14 T 23-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 225 327 1.4E-10 T 23-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 11 76 1.3E-4 T 23-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 Gene3D G3DSA:3.30.479.10 111 219 6.2E-24 T 23-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 Gene3D G3DSA:3.30.479.10 5 97 1.8E-5 T 23-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 Gene3D G3DSA:3.30.479.10 220 330 7.5E-18 T 23-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 SUPERFAMILY SSF55620 220 328 9.45E-16 T 23-10-2018 DLM_2988 0f8c1ec831cda412dc299a5e0d8fa458 343 SUPERFAMILY SSF55620 111 216 5.56E-19 T 23-10-2018 DLM_3936 765a5399ae0da085b0595127b5e9b9a4 194 SUPERFAMILY SSF53697 2 187 2.0E-46 T 23-10-2018 DLM_3936 765a5399ae0da085b0595127b5e9b9a4 194 Pfam PF13580 SIS domain 24 145 3.9E-27 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_3936 765a5399ae0da085b0595127b5e9b9a4 194 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 186 2.6E-63 T 23-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DLM_3936 765a5399ae0da085b0595127b5e9b9a4 194 Gene3D G3DSA:3.40.50.10490 2 190 4.3E-63 T 23-10-2018 DLM_3120 2a208ec7c79401bed1c000ddc841e751 109 PIRSF PIRSF019302 3 108 5.5E-40 T 23-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 DLM_3120 2a208ec7c79401bed1c000ddc841e751 109 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 5 97 6.6E-37 T 23-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 DLM_0005 6316e63e906bd48540c34ba0379ed27c 142 Gene3D G3DSA:1.20.120.340 4 132 5.2E-36 T 23-10-2018 DLM_0005 6316e63e906bd48540c34ba0379ed27c 142 Pfam PF02561 Flagellar protein FliS 13 128 1.3E-33 T 23-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DLM_0005 6316e63e906bd48540c34ba0379ed27c 142 PIRSF PIRSF039090 5 137 1.2E-37 T 23-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DLM_0005 6316e63e906bd48540c34ba0379ed27c 142 TIGRFAM TIGR00208 fliS: flagellar protein FliS 12 130 1.3E-25 T 23-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DLM_0005 6316e63e906bd48540c34ba0379ed27c 142 SUPERFAMILY SSF101116 13 128 4.58E-33 T 23-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 DLM_0212 24b1cd2ab82638aa59027644f22f2fc5 96 SUPERFAMILY SSF52091 4 90 1.96E-14 T 23-10-2018 IPR036513 STAS domain superfamily DLM_0212 24b1cd2ab82638aa59027644f22f2fc5 96 Pfam PF13466 STAS domain 5 84 1.2E-18 T 23-10-2018 IPR002645 STAS domain DLM_0212 24b1cd2ab82638aa59027644f22f2fc5 96 Gene3D G3DSA:3.30.750.24 2 95 9.6E-18 T 23-10-2018 IPR036513 STAS domain superfamily DLM_2381 a2c1357e1db620e19586f0b462553d1e 384 SMART SM01204 233 363 1.6E-29 T 23-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DLM_2381 a2c1357e1db620e19586f0b462553d1e 384 SMART SM00897 30 232 7.9E-48 T 23-10-2018 IPR013702 FIST domain, N-terminal DLM_2381 a2c1357e1db620e19586f0b462553d1e 384 Pfam PF08495 FIST N domain 34 230 1.0E-32 T 23-10-2018 IPR013702 FIST domain, N-terminal DLM_2381 a2c1357e1db620e19586f0b462553d1e 384 Pfam PF10442 FIST C domain 234 361 1.7E-13 T 23-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DLM_1305 e37798a0fdd21c17f2d4ffc821d96dba 110 Pfam PF11745 Protein of unknown function (DUF3304) 2 85 4.2E-25 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_2398 5a850a6242d453a42840242215ef52c3 117 Gene3D G3DSA:1.10.1660.10 11 86 3.4E-20 T 23-10-2018 DLM_2398 5a850a6242d453a42840242215ef52c3 117 Pfam PF13411 MerR HTH family regulatory protein 17 84 1.9E-20 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_2398 5a850a6242d453a42840242215ef52c3 117 SMART SM00422 17 87 1.8E-5 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DLM_2398 5a850a6242d453a42840242215ef52c3 117 SUPERFAMILY SSF46955 15 109 4.58E-17 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily DLM_3836 fe8f6dfe097c6a5d99d6fa3cbd92b107 481 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 237 367 1.5E-28 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3836 fe8f6dfe097c6a5d99d6fa3cbd92b107 481 Gene3D G3DSA:1.10.287.950 63 400 9.7E-45 T 23-10-2018 DLM_3836 fe8f6dfe097c6a5d99d6fa3cbd92b107 481 SMART SM00283 149 412 1.5E-20 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3836 fe8f6dfe097c6a5d99d6fa3cbd92b107 481 SUPERFAMILY SSF58104 95 381 3.4E-43 T 23-10-2018 DLM_3782 3e2cbc214ca2ba2cbccb1960c96a11b4 193 SUPERFAMILY SSF53056 3 181 5.49E-40 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DLM_3782 3e2cbc214ca2ba2cbccb1960c96a11b4 193 Gene3D G3DSA:3.40.1050.10 1 182 2.1E-46 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DLM_3782 3e2cbc214ca2ba2cbccb1960c96a11b4 193 Pfam PF00484 Carbonic anhydrase 34 177 2.7E-15 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DLM_3782 3e2cbc214ca2ba2cbccb1960c96a11b4 193 SMART SM00947 26 182 1.9E-34 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DLM_2548 ddb7aa4286382b5b8a8cd96df78e87df 283 SUPERFAMILY SSF51735 2 185 5.37E-57 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2548 ddb7aa4286382b5b8a8cd96df78e87df 283 PIRSF PIRSF000105 1 283 3.9E-87 T 23-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 DLM_2548 ddb7aa4286382b5b8a8cd96df78e87df 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 3.9E-33 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_2548 ddb7aa4286382b5b8a8cd96df78e87df 283 Gene3D G3DSA:1.10.1040.10 189 283 4.2E-34 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DLM_2548 ddb7aa4286382b5b8a8cd96df78e87df 283 SUPERFAMILY SSF48179 185 283 2.64E-32 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DLM_2548 ddb7aa4286382b5b8a8cd96df78e87df 283 Gene3D G3DSA:3.40.50.720 1 188 5.9E-67 T 23-10-2018 DLM_2548 ddb7aa4286382b5b8a8cd96df78e87df 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 9.6E-65 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DLM_3849 1caa01fc581181d431a6904f7427f78c 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 25 94 2.4E-16 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DLM_3849 1caa01fc581181d431a6904f7427f78c 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 31 78 1.2E-13 T 23-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DLM_3849 1caa01fc581181d431a6904f7427f78c 143 SUPERFAMILY SSF69118 11 142 6.89E-36 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DLM_3849 1caa01fc581181d431a6904f7427f78c 143 Gene3D G3DSA:1.20.1290.10 3 143 2.2E-40 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DLM_3817 21dd79a6846d9aa91822822ecd6a8ea9 1374 Pfam PF05567 Neisseria PilC beta-propeller domain 861 1193 1.4E-44 T 23-10-2018 IPR008707 PilC beta-propeller domain DLM_4094 c49c30430aa6562beafc8801d8eefa13 89 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 50 1.6E-5 T 23-10-2018 IPR022789 Antitoxin ParD DLM_4094 c49c30430aa6562beafc8801d8eefa13 89 SUPERFAMILY SSF47598 4 50 3.11E-12 T 23-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DLM_4094 c49c30430aa6562beafc8801d8eefa13 89 Gene3D G3DSA:1.10.8.1250 13 88 6.9E-9 T 23-10-2018 IPR038296 Antitoxin ParD superfamily DLM_0333 d53c77c37d8f0fe43e692a045d18bd86 483 Pfam PF13391 HNH endonuclease 381 434 3.4E-9 T 23-10-2018 IPR003615 HNH nuclease DLM_4405 c2baea2bd2dcf00b68bf79cfed2836d8 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 6.8E-27 T 23-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4405 c2baea2bd2dcf00b68bf79cfed2836d8 101 SUPERFAMILY SSF57716 2 101 6.84E-36 T 23-10-2018 DLM_4405 c2baea2bd2dcf00b68bf79cfed2836d8 101 Gene3D G3DSA:4.10.830.10 39 101 1.5E-22 T 23-10-2018 DLM_4405 c2baea2bd2dcf00b68bf79cfed2836d8 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.447 T 23-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 Gene3D G3DSA:3.30.70.920 54 140 9.0E-23 T 23-10-2018 DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 Pfam PF01037 Lrp/AsnC ligand binding domain 69 136 1.6E-16 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.6E-12 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.6E-12 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.6E-12 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 SUPERFAMILY SSF46785 3 63 3.54E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 Gene3D G3DSA:1.10.10.10 4 53 5.3E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 SMART SM00344 3 109 9.7E-40 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.2E-16 T 23-10-2018 DLM_3851 40a8e5547dc453344fc76f0c65d8334a 147 SUPERFAMILY SSF54909 65 138 3.65E-15 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_3551 d27285bc0d193068a6f07ad609bed675 606 Gene3D G3DSA:3.60.20.10 5 221 6.7E-49 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_3551 d27285bc0d193068a6f07ad609bed675 606 SUPERFAMILY SSF56235 5 224 9.44E-47 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_3551 d27285bc0d193068a6f07ad609bed675 606 Pfam PF13537 Glutamine amidotransferase domain 44 162 2.9E-37 T 23-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DLM_3551 d27285bc0d193068a6f07ad609bed675 606 PIRSF PIRSF001589 1 597 3.0E-113 T 23-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DLM_3551 d27285bc0d193068a6f07ad609bed675 606 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 5 531 2.0E-103 T 23-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DLM_3551 d27285bc0d193068a6f07ad609bed675 606 Pfam PF00733 Asparagine synthase 234 593 2.8E-71 T 23-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DLM_3551 d27285bc0d193068a6f07ad609bed675 606 SUPERFAMILY SSF52402 224 580 3.2E-51 T 23-10-2018 DLM_4553 ea724d52753211d4a32a8cf3fe67999e 321 SUPERFAMILY SSF53448 4 213 5.16E-38 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_4553 ea724d52753211d4a32a8cf3fe67999e 321 Gene3D G3DSA:3.90.550.10 1 227 6.4E-37 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_4553 ea724d52753211d4a32a8cf3fe67999e 321 Pfam PF00535 Glycosyl transferase family 2 8 123 1.2E-21 T 23-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DLM_4229 f449eef1f97a24190d88e4466e603c3e 152 Pfam PF00582 Universal stress protein family 1 148 6.3E-31 T 23-10-2018 IPR006016 UspA DLM_4229 f449eef1f97a24190d88e4466e603c3e 152 Gene3D G3DSA:3.40.50.620 1 148 7.0E-38 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_4229 f449eef1f97a24190d88e4466e603c3e 152 PRINTS PR01438 Universal stress protein signature 108 120 3.4E-20 T 23-10-2018 IPR006015 Universal stress protein A DLM_4229 f449eef1f97a24190d88e4466e603c3e 152 PRINTS PR01438 Universal stress protein signature 126 148 3.4E-20 T 23-10-2018 IPR006015 Universal stress protein A DLM_4229 f449eef1f97a24190d88e4466e603c3e 152 PRINTS PR01438 Universal stress protein signature 2 20 3.4E-20 T 23-10-2018 IPR006015 Universal stress protein A DLM_4229 f449eef1f97a24190d88e4466e603c3e 152 SUPERFAMILY SSF52402 1 148 8.29E-37 T 23-10-2018 DLM_4229 f449eef1f97a24190d88e4466e603c3e 152 PIRSF PIRSF006276 1 151 6.2E-22 T 23-10-2018 IPR006015 Universal stress protein A DLM_2925 73c67ab43784860cfa44c92f61fc726c 153 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.97 T 23-10-2018 IPR003791 Protein of unknown function UPF0178 DLM_2925 73c67ab43784860cfa44c92f61fc726c 153 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.8E-43 T 23-10-2018 IPR003791 Protein of unknown function UPF0178 DLM_1186 bb385f5feea28ce292ad4be6ea91a1a2 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 257 3.6E-52 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_1186 bb385f5feea28ce292ad4be6ea91a1a2 259 Gene3D G3DSA:3.90.226.10 1 258 4.5E-74 T 23-10-2018 DLM_1186 bb385f5feea28ce292ad4be6ea91a1a2 259 SUPERFAMILY SSF52096 3 257 5.71E-71 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_1186 bb385f5feea28ce292ad4be6ea91a1a2 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DLM_4419 a98b548094ff88de885b8b29082fd6bc 260 SUPERFAMILY SSF141673 1 123 4.97E-28 T 23-10-2018 DLM_4419 a98b548094ff88de885b8b29082fd6bc 260 Pfam PF03476 MOSC N-terminal beta barrel domain 1 108 5.0E-21 T 23-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 DLM_4419 a98b548094ff88de885b8b29082fd6bc 260 Pfam PF03473 MOSC domain 130 252 2.1E-30 T 23-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DLM_4419 a98b548094ff88de885b8b29082fd6bc 260 SUPERFAMILY SSF50800 139 254 5.23E-12 T 23-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DLM_1562 210cca2140bd24bc1d7e020f7a50c2c4 63 SUPERFAMILY SSF53850 1 52 2.71E-8 T 23-10-2018 DLM_1562 210cca2140bd24bc1d7e020f7a50c2c4 63 Gene3D G3DSA:3.40.190.290 1 50 1.6E-10 T 23-10-2018 DLM_0107 94306c61de754a281d8dfacefed1f9ca 108 Gene3D G3DSA:3.10.50.40 1 108 3.2E-48 T 23-10-2018 DLM_0107 94306c61de754a281d8dfacefed1f9ca 108 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 1.2E-37 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DLM_0107 94306c61de754a281d8dfacefed1f9ca 108 SUPERFAMILY SSF54534 2 107 1.32E-44 T 23-10-2018 DLM_2424 bf75eb06b1a77e9812776fff1bd7e0de 140 Gene3D G3DSA:3.90.79.10 1 139 1.3E-37 T 23-10-2018 DLM_2424 bf75eb06b1a77e9812776fff1bd7e0de 140 ProSitePatterns PS00893 Nudix box signature. 29 50 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_2424 bf75eb06b1a77e9812776fff1bd7e0de 140 Pfam PF00293 NUDIX domain 4 118 2.7E-15 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_2424 bf75eb06b1a77e9812776fff1bd7e0de 140 SUPERFAMILY SSF55811 1 136 7.85E-26 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_0903 275a4fa557fc92c1b78a678118e92a9f 269 Pfam PF07804 HipA-like C-terminal domain 9 206 7.9E-23 T 23-10-2018 IPR012893 HipA-like, C-terminal DLM_3865 c657b0cca8f6d2f984a835ff2c19d8c3 179 Pfam PF07700 Haem-NO-binding 2 159 8.7E-35 T 23-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 DLM_3865 c657b0cca8f6d2f984a835ff2c19d8c3 179 Gene3D G3DSA:3.90.1520.10 1 178 6.1E-60 T 23-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 DLM_3865 c657b0cca8f6d2f984a835ff2c19d8c3 179 SUPERFAMILY SSF111126 1 176 9.77E-37 T 23-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily DLM_3738 abbbb22fd61e113aebccfce055e00480 165 SUPERFAMILY SSF46785 19 162 4.61E-34 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_3738 abbbb22fd61e113aebccfce055e00480 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 88 122 - T 23-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DLM_3738 abbbb22fd61e113aebccfce055e00480 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 89 1.8E-12 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3738 abbbb22fd61e113aebccfce055e00480 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 139 159 1.8E-12 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3738 abbbb22fd61e113aebccfce055e00480 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 105 1.8E-12 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3738 abbbb22fd61e113aebccfce055e00480 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 125 1.8E-12 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3738 abbbb22fd61e113aebccfce055e00480 165 Pfam PF12802 MarR family 53 113 3.0E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3738 abbbb22fd61e113aebccfce055e00480 165 SMART SM00347 46 149 2.2E-26 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DLM_3738 abbbb22fd61e113aebccfce055e00480 165 Gene3D G3DSA:1.10.10.10 2 164 3.6E-37 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4319 a950d55b0f67957d801d201e13f2ceb4 163 Pfam PF08534 Redoxin 26 150 7.0E-28 T 23-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DLM_4319 a950d55b0f67957d801d201e13f2ceb4 163 SUPERFAMILY SSF52833 21 161 1.55E-37 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_4319 a950d55b0f67957d801d201e13f2ceb4 163 Gene3D G3DSA:3.40.30.10 18 163 1.5E-40 T 23-10-2018 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 Gene3D G3DSA:1.10.10.350 366 461 2.1E-21 T 23-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 Gene3D G3DSA:3.40.50.620 1 317 4.0E-136 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_2505 125e990094ad28d2803d43e64b2d4619 461 SUPERFAMILY SSF48163 302 460 4.32E-39 T 23-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 1.7E-26 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 1.7E-26 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.7E-26 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.7E-26 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 1.7E-26 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 SUPERFAMILY SSF52374 2 300 1.1E-111 T 23-10-2018 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 308 4.6E-107 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 461 31.164 T 23-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DLM_2505 125e990094ad28d2803d43e64b2d4619 461 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 460 3.0E-179 T 23-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DLM_0279 0e423e4499e14085d0725f490d006102 222 SUPERFAMILY SSF56784 2 206 7.07E-28 T 23-10-2018 IPR036412 HAD-like superfamily DLM_0279 0e423e4499e14085d0725f490d006102 222 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 2 188 6.1E-23 T 23-10-2018 DLM_0279 0e423e4499e14085d0725f490d006102 222 Pfam PF12710 haloacid dehalogenase-like hydrolase 3 186 9.6E-37 T 23-10-2018 DLM_0279 0e423e4499e14085d0725f490d006102 222 Gene3D G3DSA:3.40.50.1000 2 210 3.4E-68 T 23-10-2018 IPR023214 HAD superfamily DLM_0279 0e423e4499e14085d0725f490d006102 222 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 2 200 3.5E-54 T 23-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like DLM_0279 0e423e4499e14085d0725f490d006102 222 Gene3D G3DSA:1.20.1440.100 14 86 3.4E-68 T 23-10-2018 DLM_1811 6b78bc8b26dd7c27e9b901019cfaa67a 215 Pfam PF04340 Protein of unknown function, DUF484 3 210 8.1E-28 T 23-10-2018 IPR007435 Protein of unknown function DUF484 DLM_1811 6b78bc8b26dd7c27e9b901019cfaa67a 215 Gene3D G3DSA:3.30.450.40 36 212 5.8E-40 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_0949 dc8f0674cc07a599f85538d9aa9c720c 181 Pfam PF00857 Isochorismatase family 5 141 2.9E-22 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 DLM_0949 dc8f0674cc07a599f85538d9aa9c720c 181 Gene3D G3DSA:3.40.50.850 1 181 2.5E-34 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_0949 dc8f0674cc07a599f85538d9aa9c720c 181 SUPERFAMILY SSF52499 2 181 1.18E-34 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_0069 2927234b49fb46a88861c8560279d2f6 95 Pfam PF04380 Membrane fusogenic activity 1 74 1.3E-30 T 23-10-2018 IPR007475 Membrane fusogenic activity DLM_3381 8617a2912d7da2e4a919becc06b96fe1 519 SUPERFAMILY SSF53756 130 450 5.09E-6 T 23-10-2018 DLM_3873 e354bca8f581a62e0ca42f8458262205 286 Pfam PF00892 EamA-like transporter family 8 135 1.3E-21 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3873 e354bca8f581a62e0ca42f8458262205 286 Pfam PF00892 EamA-like transporter family 148 280 8.6E-20 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3873 e354bca8f581a62e0ca42f8458262205 286 SUPERFAMILY SSF103481 37 139 7.59E-18 T 23-10-2018 DLM_3873 e354bca8f581a62e0ca42f8458262205 286 SUPERFAMILY SSF103481 186 285 1.02E-17 T 23-10-2018 DLM_0679 c3676f1bf6d6cdd7294487fc73d7fe01 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 2.3E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0679 c3676f1bf6d6cdd7294487fc73d7fe01 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 2.3E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0679 c3676f1bf6d6cdd7294487fc73d7fe01 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 2.3E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_0679 c3676f1bf6d6cdd7294487fc73d7fe01 528 Gene3D G3DSA:1.10.287.950 225 505 1.9E-50 T 23-10-2018 DLM_0679 c3676f1bf6d6cdd7294487fc73d7fe01 528 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 488 1.5E-29 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0679 c3676f1bf6d6cdd7294487fc73d7fe01 528 SUPERFAMILY SSF58104 247 504 5.75E-46 T 23-10-2018 DLM_0679 c3676f1bf6d6cdd7294487fc73d7fe01 528 SMART SM00283 266 503 4.9E-35 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_3914 8fed407fa6da3dc318e2c4c6cc3f2de4 89 PIRSF PIRSF020555 1 89 1.1E-39 T 23-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats DLM_3914 8fed407fa6da3dc318e2c4c6cc3f2de4 89 Pfam PF16068 Domain of unknown function (DUF4810) 1 83 4.6E-31 T 23-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats DLM_2680 b4315ffaa1f24daa69255404c31b4c38 302 Pfam PF10124 Mu-like prophage major head subunit gpT 233 298 1.3E-23 T 23-10-2018 IPR018774 Bacteriophage Mu, GpT DLM_2680 b4315ffaa1f24daa69255404c31b4c38 302 Pfam PF10124 Mu-like prophage major head subunit gpT 8 149 1.9E-57 T 23-10-2018 IPR018774 Bacteriophage Mu, GpT DLM_2680 b4315ffaa1f24daa69255404c31b4c38 302 Pfam PF10124 Mu-like prophage major head subunit gpT 159 228 7.9E-16 T 23-10-2018 IPR018774 Bacteriophage Mu, GpT DLM_3937 a2db27f561db4409d0c27c3906e4da77 295 SUPERFAMILY SSF103481 207 294 3.27E-8 T 23-10-2018 DLM_3937 a2db27f561db4409d0c27c3906e4da77 295 SUPERFAMILY SSF103481 41 139 4.71E-12 T 23-10-2018 DLM_3937 a2db27f561db4409d0c27c3906e4da77 295 Pfam PF00892 EamA-like transporter family 155 293 2.7E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3937 a2db27f561db4409d0c27c3906e4da77 295 Pfam PF00892 EamA-like transporter family 1 135 3.8E-19 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3902 e2d69128d1026d8bd046065b96a01173 287 SUPERFAMILY SSF103481 191 286 3.14E-5 T 23-10-2018 DLM_3902 e2d69128d1026d8bd046065b96a01173 287 Pfam PF00892 EamA-like transporter family 152 283 3.7E-9 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3902 e2d69128d1026d8bd046065b96a01173 287 Pfam PF00892 EamA-like transporter family 9 139 8.8E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_3902 e2d69128d1026d8bd046065b96a01173 287 SUPERFAMILY SSF103481 42 142 3.14E-13 T 23-10-2018 DLM_0385 cbdd2017910a4b0c096234e813a5bb08 316 Gene3D G3DSA:3.40.50.1820 17 195 2.6E-23 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0385 cbdd2017910a4b0c096234e813a5bb08 316 SUPERFAMILY SSF53474 18 307 2.29E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0385 cbdd2017910a4b0c096234e813a5bb08 316 Pfam PF12146 Serine aminopeptidase, S33 50 185 1.1E-12 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 DLM_3134 6f6137aac45769b1d9c9834d9066523d 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DLM_3134 6f6137aac45769b1d9c9834d9066523d 257 SUPERFAMILY SSF52096 2 256 2.89E-88 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_3134 6f6137aac45769b1d9c9834d9066523d 257 Gene3D G3DSA:3.90.226.10 2 199 1.7E-70 T 23-10-2018 DLM_3134 6f6137aac45769b1d9c9834d9066523d 257 Gene3D G3DSA:1.10.12.10 200 256 1.0E-21 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DLM_3134 6f6137aac45769b1d9c9834d9066523d 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 255 2.2E-80 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_3960 93caab8d4c0b315b53079a2c7d94a5af 166 Pfam PF07813 LTXXQ motif family protein 52 141 1.9E-15 T 23-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 DLM_1986 2f3c277891f63eb1f14de546545f9ee1 414 Gene3D G3DSA:3.30.2010.10 204 285 5.2E-32 T 23-10-2018 DLM_1986 2f3c277891f63eb1f14de546545f9ee1 414 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 28 205 4.2E-57 T 23-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 DLM_1986 2f3c277891f63eb1f14de546545f9ee1 414 Pfam PF01435 Peptidase family M48 208 412 4.9E-40 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DLM_0577 ed507beb0a44600a47b694def24f1447 288 Gene3D G3DSA:3.30.479.30 45 181 3.1E-21 T 23-10-2018 DLM_0577 ed507beb0a44600a47b694def24f1447 288 TIGRFAM TIGR01932 hflC: HflC protein 142 278 4.0E-50 T 23-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DLM_0577 ed507beb0a44600a47b694def24f1447 288 Pfam PF01145 SPFH domain / Band 7 family 20 195 2.0E-29 T 23-10-2018 IPR001107 Band 7 domain DLM_0577 ed507beb0a44600a47b694def24f1447 288 SUPERFAMILY SSF117892 48 184 8.5E-28 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily DLM_0577 ed507beb0a44600a47b694def24f1447 288 PIRSF PIRSF005651 1 288 2.6E-99 T 23-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DLM_0577 ed507beb0a44600a47b694def24f1447 288 SMART SM00244 16 179 1.3E-31 T 23-10-2018 IPR001107 Band 7 domain DLM_0494 6fd0077e3cc3d4308ab578d701ed7336 62 SMART SM00899 1 60 7.8E-5 T 23-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DLM_0494 6fd0077e3cc3d4308ab578d701ed7336 62 SUPERFAMILY SSF50037 3 60 1.01E-13 T 23-10-2018 IPR008988 Transcriptional repressor, C-terminal DLM_0494 6fd0077e3cc3d4308ab578d701ed7336 62 Pfam PF04023 FeoA domain 8 59 8.6E-13 T 23-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DLM_0494 6fd0077e3cc3d4308ab578d701ed7336 62 Gene3D G3DSA:2.30.30.90 1 61 1.7E-15 T 23-10-2018 IPR038157 Ferrous iron transporter, core domain DLM_4057 9318ae7d7ae27b1e4163d48d151f490b 249 Pfam PF12697 Alpha/beta hydrolase family 14 206 8.4E-10 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_4057 9318ae7d7ae27b1e4163d48d151f490b 249 SUPERFAMILY SSF53474 2 247 2.9E-30 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4057 9318ae7d7ae27b1e4163d48d151f490b 249 Gene3D G3DSA:3.40.50.1820 1 248 1.1E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4292 1403a59a319c2f008988e34346ab8035 522 SUPERFAMILY SSF51905 5 519 1.25E-64 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4292 1403a59a319c2f008988e34346ab8035 522 SUPERFAMILY SSF54373 367 460 8.14E-12 T 23-10-2018 DLM_4292 1403a59a319c2f008988e34346ab8035 522 Gene3D G3DSA:3.50.50.60 7 513 6.8E-146 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4292 1403a59a319c2f008988e34346ab8035 522 PIRSF PIRSF000137 1 361 6.1E-76 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_4292 1403a59a319c2f008988e34346ab8035 522 PIRSF PIRSF000137 364 522 2.7E-25 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_4292 1403a59a319c2f008988e34346ab8035 522 Pfam PF05199 GMC oxidoreductase 374 512 3.3E-24 T 23-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DLM_4292 1403a59a319c2f008988e34346ab8035 522 Gene3D G3DSA:3.30.410.40 155 454 6.8E-146 T 23-10-2018 DLM_4292 1403a59a319c2f008988e34346ab8035 522 Pfam PF00732 GMC oxidoreductase 7 303 3.3E-66 T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DLM_2583 0d6f264e3cbff956a5c19f1cb8576c23 209 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 200 2.4E-58 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_2583 0d6f264e3cbff956a5c19f1cb8576c23 209 Pfam PF01914 MarC family integral membrane protein 5 203 1.7E-61 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_1934 82837030f1c69a5ee86e9c1d80a23829 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 543 6.1E-24 T 23-10-2018 IPR006512 YidE/YbjL duplication DLM_1934 82837030f1c69a5ee86e9c1d80a23829 560 Pfam PF06826 Predicted Permease Membrane Region 16 178 3.1E-34 T 23-10-2018 IPR006512 YidE/YbjL duplication DLM_1934 82837030f1c69a5ee86e9c1d80a23829 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 2.0E-36 T 23-10-2018 IPR006512 YidE/YbjL duplication DLM_1934 82837030f1c69a5ee86e9c1d80a23829 560 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 2 559 5.4E-166 T 23-10-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 DLM_1934 82837030f1c69a5ee86e9c1d80a23829 560 SUPERFAMILY SSF116726 289 375 5.62E-7 T 23-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DLM_0460 b2264da6a8041b4eb0fe9c960dbaa281 415 Pfam PF00464 Serine hydroxymethyltransferase 9 382 2.5E-169 T 23-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DLM_0460 b2264da6a8041b4eb0fe9c960dbaa281 415 Gene3D G3DSA:3.90.1150.10 10 392 4.6E-182 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_0460 b2264da6a8041b4eb0fe9c960dbaa281 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 51.648 T 23-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DLM_0460 b2264da6a8041b4eb0fe9c960dbaa281 415 PIRSF PIRSF000412 1 414 2.5E-165 T 23-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DLM_0460 b2264da6a8041b4eb0fe9c960dbaa281 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 23-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DLM_0460 b2264da6a8041b4eb0fe9c960dbaa281 415 Gene3D G3DSA:3.40.640.10 37 286 4.6E-182 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_0460 b2264da6a8041b4eb0fe9c960dbaa281 415 SUPERFAMILY SSF53383 5 413 2.31E-176 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2885 77f6d5c4424b50545306e1fafb4a15d4 201 Pfam PF03975 CheD chemotactic sensory transduction 64 167 4.3E-31 T 23-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 DLM_2885 77f6d5c4424b50545306e1fafb4a15d4 201 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 17 171 28.221 T 23-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 DLM_2885 77f6d5c4424b50545306e1fafb4a15d4 201 Gene3D G3DSA:3.30.1330.200 19 178 1.3E-50 T 23-10-2018 IPR038592 CheD-like superfamily DLM_2885 77f6d5c4424b50545306e1fafb4a15d4 201 SUPERFAMILY SSF64438 22 172 1.65E-47 T 23-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DLM_4446 51867547a57346d7cd0753895c7dacc0 354 SUPERFAMILY SSF55347 141 286 5.23E-35 T 23-10-2018 DLM_4446 51867547a57346d7cd0753895c7dacc0 354 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 149 259 3.9E-16 T 23-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DLM_4446 51867547a57346d7cd0753895c7dacc0 354 SUPERFAMILY SSF51735 7 168 1.47E-40 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_4446 51867547a57346d7cd0753895c7dacc0 354 Gene3D G3DSA:3.30.360.10 141 346 4.9E-123 T 23-10-2018 DLM_4446 51867547a57346d7cd0753895c7dacc0 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 14 131 1.6E-25 T 23-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DLM_4446 51867547a57346d7cd0753895c7dacc0 354 Gene3D G3DSA:3.40.50.720 15 324 4.9E-123 T 23-10-2018 DLM_2830 414c3bd5ec45010841b61e179649bbb8 513 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 44 508 1.5E-205 T 23-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DLM_2830 414c3bd5ec45010841b61e179649bbb8 513 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 89 508 3.5E-174 T 23-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DLM_1112 da6cbec6f3cd777ce7eb7fcc6555d229 67 Pfam PF10981 Protein of unknown function (DUF2788) 14 63 5.4E-24 T 23-10-2018 IPR021249 Protein of unknown function DUF2788 DLM_1955 86b16e6ce111f26c750901d0ccfe43f6 546 SMART SM01080 36 317 3.5E-66 T 23-10-2018 IPR007890 CHASE2 DLM_1955 86b16e6ce111f26c750901d0ccfe43f6 546 Gene3D G3DSA:3.30.70.270 368 542 8.4E-53 T 23-10-2018 DLM_1955 86b16e6ce111f26c750901d0ccfe43f6 546 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 376 541 1.3E-44 T 23-10-2018 IPR000160 GGDEF domain DLM_1955 86b16e6ce111f26c750901d0ccfe43f6 546 Pfam PF05226 CHASE2 domain 26 311 1.8E-46 T 23-10-2018 IPR007890 CHASE2 DLM_1955 86b16e6ce111f26c750901d0ccfe43f6 546 Pfam PF00990 Diguanylate cyclase, GGDEF domain 380 539 2.2E-45 T 23-10-2018 IPR000160 GGDEF domain DLM_1955 86b16e6ce111f26c750901d0ccfe43f6 546 SMART SM00267 369 544 5.8E-54 T 23-10-2018 IPR000160 GGDEF domain DLM_1955 86b16e6ce111f26c750901d0ccfe43f6 546 SUPERFAMILY SSF55073 385 542 4.08E-44 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_0016 bf0b0dd1ca5142f5c02453731af14c86 284 Pfam PF03755 YicC-like family, N-terminal region 1 151 7.1E-39 T 23-10-2018 IPR013527 YicC-like, N-terminal DLM_0016 bf0b0dd1ca5142f5c02453731af14c86 284 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 284 1.8E-77 T 23-10-2018 IPR005229 Conserved hypothetical protein CHP00255 DLM_0016 bf0b0dd1ca5142f5c02453731af14c86 284 Pfam PF08340 Domain of unknown function (DUF1732) 200 284 5.5E-35 T 23-10-2018 IPR013551 Domain of unknown function DUF1732 DLM_4468 33a1ff83a278a57a34eb72e8037e1b76 119 Pfam PF04320 Protein with unknown function (DUF469) 19 117 1.4E-24 T 23-10-2018 IPR007416 Protein of unknown function DUF469 DLM_2678 c16a68b0c3a836a9787c44010e505225 139 Pfam PF07030 Protein of unknown function (DUF1320) 2 118 3.2E-39 T 23-10-2018 IPR009752 Bacteriophage Mu, Gp36 DLM_3051 87e4989059202f5b295911e38f29c999 117 Gene3D G3DSA:2.60.40.180 1 117 6.2E-39 T 23-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DLM_3051 87e4989059202f5b295911e38f29c999 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 1.9E-37 T 23-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DLM_3051 87e4989059202f5b295911e38f29c999 117 Pfam PF00576 HIUase/Transthyretin family 4 116 9.1E-33 T 23-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DLM_3051 87e4989059202f5b295911e38f29c999 117 SUPERFAMILY SSF49472 1 117 3.79E-39 T 23-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DLM_0976 ddf905e917c48e73bc9c53c782748abe 337 SUPERFAMILY SSF53850 32 326 1.71E-71 T 23-10-2018 DLM_0976 ddf905e917c48e73bc9c53c782748abe 337 Gene3D G3DSA:3.40.190.10 127 315 1.6E-101 T 23-10-2018 DLM_0976 ddf905e917c48e73bc9c53c782748abe 337 Pfam PF13343 Bacterial extracellular solute-binding protein 80 307 1.5E-23 T 23-10-2018 DLM_0976 ddf905e917c48e73bc9c53c782748abe 337 Gene3D G3DSA:3.40.190.10 34 307 1.6E-101 T 23-10-2018 DLM_0976 ddf905e917c48e73bc9c53c782748abe 337 PIRSF PIRSF002825 4 337 3.9E-79 T 23-10-2018 IPR026045 Ferric binding protein DLM_3368 542724b7915a2bf792255f4392a6ba56 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 243 2.6E-60 T 23-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DLM_3368 542724b7915a2bf792255f4392a6ba56 248 Gene3D G3DSA:3.40.1390.30 15 232 3.3E-77 T 23-10-2018 DLM_3368 542724b7915a2bf792255f4392a6ba56 248 Gene3D G3DSA:3.40.1390.30 97 219 3.3E-77 T 23-10-2018 DLM_3368 542724b7915a2bf792255f4392a6ba56 248 SUPERFAMILY SSF102705 1 247 6.8E-77 T 23-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DLM_3368 542724b7915a2bf792255f4392a6ba56 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 233 5.2E-56 T 23-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DLM_0785 1db6ae60faada75cd048cec1bd91e311 352 PIRSF PIRSF016624 21 349 2.7E-35 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_0785 1db6ae60faada75cd048cec1bd91e311 352 Pfam PF10123 Mu-like prophage I protein 47 334 3.3E-62 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_0703 e53fe2dd90db34a8f2a09ae701d4e167 223 Pfam PF02810 SEC-C motif 204 221 2.1E-10 T 23-10-2018 IPR004027 SEC-C motif DLM_0703 e53fe2dd90db34a8f2a09ae701d4e167 223 Gene3D G3DSA:3.10.450.50 145 223 1.6E-10 T 23-10-2018 DLM_0703 e53fe2dd90db34a8f2a09ae701d4e167 223 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 11 185 3.8E-32 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 DLM_0703 e53fe2dd90db34a8f2a09ae701d4e167 223 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 186 5.8E-28 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 DLM_0703 e53fe2dd90db34a8f2a09ae701d4e167 223 SUPERFAMILY SSF101327 13 192 9.94E-26 T 23-10-2018 IPR036255 YgfB-like superfamily DLM_0703 e53fe2dd90db34a8f2a09ae701d4e167 223 SUPERFAMILY SSF103642 201 222 4.25E-8 T 23-10-2018 DLM_4141 2d841418f4eac63009bc6caa31008429 414 Gene3D G3DSA:3.40.190.10 140 396 7.4E-164 T 23-10-2018 DLM_4141 2d841418f4eac63009bc6caa31008429 414 SUPERFAMILY SSF53850 23 410 2.79E-60 T 23-10-2018 DLM_4141 2d841418f4eac63009bc6caa31008429 414 Pfam PF01547 Bacterial extracellular solute-binding protein 60 307 9.0E-24 T 23-10-2018 IPR006059 Bacterial extracellular solute-binding protein DLM_4141 2d841418f4eac63009bc6caa31008429 414 Gene3D G3DSA:3.40.190.10 25 372 7.4E-164 T 23-10-2018 DLM_2871 df1d534516ef243ad7ed7e5c7b132d51 425 Gene3D G3DSA:3.90.1150.10 289 425 8.5E-50 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_2871 df1d534516ef243ad7ed7e5c7b132d51 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 421 7.8E-141 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_2871 df1d534516ef243ad7ed7e5c7b132d51 425 PIRSF PIRSF001434 1 424 1.5E-130 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_2871 df1d534516ef243ad7ed7e5c7b132d51 425 Gene3D G3DSA:3.40.640.10 1 285 2.2E-103 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2871 df1d534516ef243ad7ed7e5c7b132d51 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 421 6.9E-198 T 23-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 DLM_2871 df1d534516ef243ad7ed7e5c7b132d51 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_2871 df1d534516ef243ad7ed7e5c7b132d51 425 SUPERFAMILY SSF53383 1 421 3.19E-131 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_0539 72ce98badab925fc80bb00494adf4f64 188 Pfam PF16157 Domain of unknown function (DUF4865) 1 183 1.3E-56 T 23-10-2018 IPR032349 Protein of unknown function DUF4865 DLM_4091 b3648c6ea2af7b7cb71ebcf0b9cc62c5 49 SUPERFAMILY SSF47413 1 47 6.48E-11 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_4091 b3648c6ea2af7b7cb71ebcf0b9cc62c5 49 Gene3D G3DSA:1.10.260.40 1 49 1.9E-13 T 23-10-2018 DLM_4091 b3648c6ea2af7b7cb71ebcf0b9cc62c5 49 Pfam PF01381 Helix-turn-helix 1 43 1.2E-9 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_3799 1884d1ba73a51963d9143ed0256676da 152 Pfam PF01878 EVE domain 2 149 8.3E-49 T 23-10-2018 IPR002740 EVE domain DLM_3799 1884d1ba73a51963d9143ed0256676da 152 SUPERFAMILY SSF88697 1 149 5.8E-57 T 23-10-2018 IPR015947 PUA-like superfamily DLM_3799 1884d1ba73a51963d9143ed0256676da 152 Gene3D G3DSA:3.10.590.10 1 151 1.3E-55 T 23-10-2018 DLM_4545 fa373b6d2ac49e2a542bc13b509e227d 459 Gene3D G3DSA:1.20.1250.20 1 230 3.7E-57 T 23-10-2018 DLM_4545 fa373b6d2ac49e2a542bc13b509e227d 459 SUPERFAMILY SSF103473 22 454 7.32E-26 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_4545 fa373b6d2ac49e2a542bc13b509e227d 459 Gene3D G3DSA:1.20.1250.20 232 458 4.8E-53 T 23-10-2018 DLM_2138 668aeebce1c9503f8f7b2ddba385c6b8 271 Gene3D G3DSA:3.40.50.720 113 251 1.5E-63 T 23-10-2018 DLM_2138 668aeebce1c9503f8f7b2ddba385c6b8 271 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 16 98 1.7E-15 T 23-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DLM_2138 668aeebce1c9503f8f7b2ddba385c6b8 271 Gene3D G3DSA:3.40.50.10860 11 112 1.5E-63 T 23-10-2018 DLM_2138 668aeebce1c9503f8f7b2ddba385c6b8 271 SUPERFAMILY SSF51735 113 253 2.39E-25 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2138 668aeebce1c9503f8f7b2ddba385c6b8 271 Pfam PF00899 ThiF family 129 164 2.4E-5 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DLM_2138 668aeebce1c9503f8f7b2ddba385c6b8 271 SUPERFAMILY SSF53223 5 110 6.33E-22 T 23-10-2018 DLM_1116 4322456c6429423174508252fcbd27bf 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 373 3.4E-109 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DLM_1116 4322456c6429423174508252fcbd27bf 387 Gene3D G3DSA:1.20.1090.10 192 387 1.7E-53 T 23-10-2018 DLM_1116 4322456c6429423174508252fcbd27bf 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 265 285 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DLM_1116 4322456c6429423174508252fcbd27bf 387 Gene3D G3DSA:3.40.50.1970 2 190 5.6E-53 T 23-10-2018 DLM_1116 4322456c6429423174508252fcbd27bf 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 179 207 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DLM_1116 4322456c6429423174508252fcbd27bf 387 SUPERFAMILY SSF56796 6 384 3.27E-120 T 23-10-2018 DLM_1722 1c4c6a8a011e9bc1560fa55df9a32c32 285 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 18 276 1.1E-71 T 23-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DLM_1722 1c4c6a8a011e9bc1560fa55df9a32c32 285 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 285 139.197 T 23-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DLM_1722 1c4c6a8a011e9bc1560fa55df9a32c32 285 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 14 279 2.2E-97 T 23-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DLM_2155 7491a7e4f8e6a09215de10fae07104d6 293 Gene3D G3DSA:3.40.830.10 1 293 7.6E-90 T 23-10-2018 DLM_2155 7491a7e4f8e6a09215de10fae07104d6 293 SUPERFAMILY SSF53213 2 291 4.32E-90 T 23-10-2018 DLM_2155 7491a7e4f8e6a09215de10fae07104d6 293 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 285 3.8E-88 T 23-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DLM_1473 e54de42fbf66918e4338717a16ddd2d0 463 Gene3D G3DSA:1.10.3210.10 65 238 1.0E-5 T 23-10-2018 DLM_1473 e54de42fbf66918e4338717a16ddd2d0 463 Gene3D G3DSA:3.30.450.40 301 462 1.8E-17 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_1473 e54de42fbf66918e4338717a16ddd2d0 463 SUPERFAMILY SSF55781 315 461 1.7E-11 T 23-10-2018 DLM_3004 579de740e7ee29dd5a1997960f38d0b3 256 SUPERFAMILY SSF69593 8 233 1.09E-37 T 23-10-2018 DLM_3004 579de740e7ee29dd5a1997960f38d0b3 256 Pfam PF01553 Acyltransferase 59 182 4.0E-18 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DLM_3004 579de740e7ee29dd5a1997960f38d0b3 256 SMART SM00563 71 185 2.4E-28 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DLM_0602 f0ac2cfdcfc77b5cd6a295b5db0baf3a 120 Pfam PF06945 Protein of unknown function (DUF1289) 7 50 2.0E-14 T 23-10-2018 IPR010710 Protein of unknown function DUF1289 DLM_0001 82d7638786745b3eb6c29114d199b6f1 293 Gene3D G3DSA:3.40.50.2000 113 261 4.0E-11 T 23-10-2018 DLM_0001 82d7638786745b3eb6c29114d199b6f1 293 SUPERFAMILY SSF53756 6 285 3.77E-11 T 23-10-2018 DLM_3337 a08fed65fd4a0a18d43a461a97084397 149 Pfam PF00293 NUDIX domain 23 121 2.8E-10 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DLM_3337 a08fed65fd4a0a18d43a461a97084397 149 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DLM_3337 a08fed65fd4a0a18d43a461a97084397 149 Gene3D G3DSA:3.90.79.10 6 146 5.4E-19 T 23-10-2018 DLM_3337 a08fed65fd4a0a18d43a461a97084397 149 SUPERFAMILY SSF55811 8 136 4.2E-21 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DLM_0422 0acebd085fb4cc4523534a2d99962444 150 PRINTS PR00117 Barnase signature 46 63 3.2E-6 T 23-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 DLM_0422 0acebd085fb4cc4523534a2d99962444 150 PRINTS PR00117 Barnase signature 66 83 3.2E-6 T 23-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 DLM_0422 0acebd085fb4cc4523534a2d99962444 150 PRINTS PR00117 Barnase signature 105 124 3.2E-6 T 23-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 DLM_0422 0acebd085fb4cc4523534a2d99962444 150 PRINTS PR00117 Barnase signature 127 145 3.2E-6 T 23-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 DLM_0422 0acebd085fb4cc4523534a2d99962444 150 PIRSF PIRSF001013 2 147 1.8E-29 T 23-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 DLM_0422 0acebd085fb4cc4523534a2d99962444 150 SUPERFAMILY SSF53933 45 146 1.56E-26 T 23-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 DLM_0422 0acebd085fb4cc4523534a2d99962444 150 Pfam PF00545 ribonuclease 59 144 5.0E-21 T 23-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 DLM_0422 0acebd085fb4cc4523534a2d99962444 150 Gene3D G3DSA:3.10.450.30 34 146 1.6E-31 T 23-10-2018 DLM_1942 2c524764d26b36d3c547b28a51012244 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 181 7.7E-23 T 23-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DLM_1942 2c524764d26b36d3c547b28a51012244 541 SUPERFAMILY SSF58104 240 541 4.58E-70 T 23-10-2018 DLM_1942 2c524764d26b36d3c547b28a51012244 541 SMART SM00283 279 540 5.3E-72 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1942 2c524764d26b36d3c547b28a51012244 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 507 1.3E-42 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1942 2c524764d26b36d3c547b28a51012244 541 Gene3D G3DSA:1.10.287.950 210 541 2.9E-74 T 23-10-2018 DLM_1942 2c524764d26b36d3c547b28a51012244 541 SMART SM00304 271 324 43.0 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1942 2c524764d26b36d3c547b28a51012244 541 SMART SM00304 210 264 9.7E-5 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_3924 e69541fd7f2749b1a4ab017ca7210116 107 Pfam PF14373 Superinfection immunity protein 58 98 1.2E-10 T 23-10-2018 IPR016410 Bacteriophage-associated immunity protein DLM_3924 e69541fd7f2749b1a4ab017ca7210116 107 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 52 97 0.008 T 23-10-2018 IPR016410 Bacteriophage-associated immunity protein DLM_2994 fcf6c26fa36f314c3d316f4d94357878 154 Pfam PF07681 DoxX 27 107 2.6E-15 T 23-10-2018 IPR032808 DoxX family DLM_0681 4e6070b45e8fbcf59c8c74ed0c8dde49 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 23-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DLM_0681 4e6070b45e8fbcf59c8c74ed0c8dde49 163 SUPERFAMILY SSF50891 2 162 1.02E-56 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily DLM_0681 4e6070b45e8fbcf59c8c74ed0c8dde49 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.1E-12 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DLM_0681 4e6070b45e8fbcf59c8c74ed0c8dde49 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.1E-12 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DLM_0681 4e6070b45e8fbcf59c8c74ed0c8dde49 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.1E-12 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DLM_0681 4e6070b45e8fbcf59c8c74ed0c8dde49 163 PIRSF PIRSF001467 1 162 6.3E-28 T 23-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DLM_0681 4e6070b45e8fbcf59c8c74ed0c8dde49 163 Gene3D G3DSA:2.40.100.10 1 163 1.3E-64 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily DLM_0681 4e6070b45e8fbcf59c8c74ed0c8dde49 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 8.0E-46 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DLM_3932 033387d53fa0f6dc8f63720d5c39def9 281 Pfam PF01263 Aldose 1-epimerase 21 278 2.5E-40 T 23-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DLM_3932 033387d53fa0f6dc8f63720d5c39def9 281 Gene3D G3DSA:2.70.98.10 13 280 8.0E-72 T 23-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DLM_3932 033387d53fa0f6dc8f63720d5c39def9 281 SUPERFAMILY SSF74650 16 278 4.02E-60 T 23-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DLM_3932 033387d53fa0f6dc8f63720d5c39def9 281 PIRSF PIRSF016020 9 280 6.8E-48 T 23-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 DLM_0726 db215cf0d5bb5261a090173c79749bac 196 Pfam PF00881 Nitroreductase family 18 174 6.8E-12 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DLM_0726 db215cf0d5bb5261a090173c79749bac 196 Gene3D G3DSA:3.40.109.10 5 194 6.2E-28 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_0726 db215cf0d5bb5261a090173c79749bac 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 43.119 T 23-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 DLM_0726 db215cf0d5bb5261a090173c79749bac 196 SUPERFAMILY SSF55469 11 194 4.32E-40 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DLM_4031 448758abb2f1d73ac45f26b2ba73ce55 152 Pfam PF02391 MoaE protein 8 121 1.1E-35 T 23-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DLM_4031 448758abb2f1d73ac45f26b2ba73ce55 152 SUPERFAMILY SSF54690 5 151 2.48E-51 T 23-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DLM_4031 448758abb2f1d73ac45f26b2ba73ce55 152 Gene3D G3DSA:3.90.1170.40 2 151 1.9E-51 T 23-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DLM_3140 99c51ef8c1d58e9451f59cc199e1087a 252 SUPERFAMILY SSF47240 7 246 4.06E-79 T 23-10-2018 IPR009078 Ferritin-like superfamily DLM_3140 99c51ef8c1d58e9451f59cc199e1087a 252 Pfam PF05138 Phenylacetic acid catabolic protein 1 252 2.6E-92 T 23-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 DLM_3140 99c51ef8c1d58e9451f59cc199e1087a 252 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 16 252 2.7E-87 T 23-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 DLM_3140 99c51ef8c1d58e9451f59cc199e1087a 252 PIRSF PIRSF037834 1 252 2.6E-95 T 23-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 DLM_3140 99c51ef8c1d58e9451f59cc199e1087a 252 Gene3D G3DSA:1.20.1260.10 2 252 3.0E-97 T 23-10-2018 IPR012347 Ferritin-like DLM_3696 f11db75992d354d4aeb98044b7231134 202 Gene3D G3DSA:1.10.10.10 91 202 3.8E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_3696 f11db75992d354d4aeb98044b7231134 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.9E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3696 f11db75992d354d4aeb98044b7231134 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.9E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3696 f11db75992d354d4aeb98044b7231134 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.9E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3696 f11db75992d354d4aeb98044b7231134 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3696 f11db75992d354d4aeb98044b7231134 202 SUPERFAMILY SSF46894 132 199 4.08E-18 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DLM_3696 f11db75992d354d4aeb98044b7231134 202 SMART SM00421 142 199 1.6E-18 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_3696 f11db75992d354d4aeb98044b7231134 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 196 8.3E-17 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DLM_1930 5c36c60c79c3bf1de38467954939b3df 466 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 3 459 2.2E-204 T 23-10-2018 IPR012831 Precorrin 3B synthase CobZ DLM_1930 5c36c60c79c3bf1de38467954939b3df 466 Gene3D G3DSA:3.90.700.10 236 397 6.0E-90 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_1930 5c36c60c79c3bf1de38467954939b3df 466 SUPERFAMILY SSF51905 2 460 2.17E-38 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_1930 5c36c60c79c3bf1de38467954939b3df 466 Pfam PF00890 FAD binding domain 3 432 1.7E-33 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_1930 5c36c60c79c3bf1de38467954939b3df 466 SUPERFAMILY SSF56425 235 396 1.22E-24 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_1930 5c36c60c79c3bf1de38467954939b3df 466 Gene3D G3DSA:3.50.50.60 2 455 6.0E-90 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4461 30984f5b614738694640359c4f8c4af4 372 Gene3D G3DSA:3.30.70.270 209 371 1.7E-43 T 23-10-2018 DLM_4461 30984f5b614738694640359c4f8c4af4 372 SMART SM00267 203 372 2.3E-43 T 23-10-2018 IPR000160 GGDEF domain DLM_4461 30984f5b614738694640359c4f8c4af4 372 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 213 370 6.3E-40 T 23-10-2018 IPR000160 GGDEF domain DLM_4461 30984f5b614738694640359c4f8c4af4 372 SUPERFAMILY SSF55073 219 370 4.24E-38 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4461 30984f5b614738694640359c4f8c4af4 372 Pfam PF00990 Diguanylate cyclase, GGDEF domain 216 368 3.0E-35 T 23-10-2018 IPR000160 GGDEF domain DLM_2872 b42a9c8c58e2414b91a17b3bd87bae8e 225 Gene3D G3DSA:1.10.357.10 7 223 1.6E-51 T 23-10-2018 DLM_2872 b42a9c8c58e2414b91a17b3bd87bae8e 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 3.0E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2872 b42a9c8c58e2414b91a17b3bd87bae8e 225 SUPERFAMILY SSF46689 3 75 1.85E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2872 b42a9c8c58e2414b91a17b3bd87bae8e 225 Pfam PF13972 Bacterial transcriptional repressor 63 208 2.7E-17 T 23-10-2018 IPR025722 Bacterial transcriptional repressor TetR DLM_2872 b42a9c8c58e2414b91a17b3bd87bae8e 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.4E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2872 b42a9c8c58e2414b91a17b3bd87bae8e 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.4E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_2212 b01ee6a92923157f9e2aa58b9a265bdb 313 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 2 273 1.3E-66 T 23-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DLM_2212 b01ee6a92923157f9e2aa58b9a265bdb 313 Pfam PF03186 CobD/Cbib protein 7 289 1.1E-94 T 23-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DLM_2212 b01ee6a92923157f9e2aa58b9a265bdb 313 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 104.688 T 23-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DLM_3946 fbee88aab67fcc4866a9191b4be26ac6 300 Pfam PF01936 NYN domain 5 139 7.0E-34 T 23-10-2018 IPR021139 NYN domain, limkain-b1-type DLM_3946 fbee88aab67fcc4866a9191b4be26ac6 300 Gene3D G3DSA:1.10.10.1880 181 253 9.9E-32 T 23-10-2018 DLM_3946 fbee88aab67fcc4866a9191b4be26ac6 300 Pfam PF12872 OST-HTH/LOTUS domain 189 243 5.3E-14 T 23-10-2018 IPR025605 OST-HTH/LOTUS domain DLM_3946 fbee88aab67fcc4866a9191b4be26ac6 300 Gene3D G3DSA:3.40.50.1010 1 143 1.2E-17 T 23-10-2018 DLM_0349 df81c94a3cd43b427e29e52ae760c72b 114 SUPERFAMILY SSF81343 4 114 1.53E-25 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0349 df81c94a3cd43b427e29e52ae760c72b 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 84 2.6E-10 T 23-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_0349 df81c94a3cd43b427e29e52ae760c72b 114 PIRSF PIRSF000169 1 114 5.9E-38 T 23-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 DLM_0349 df81c94a3cd43b427e29e52ae760c72b 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 112 2.9E-34 T 23-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 DLM_0349 df81c94a3cd43b427e29e52ae760c72b 114 Gene3D G3DSA:1.20.1300.10 1 114 3.4E-28 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DLM_1364 50387bdbca3b23dbd29d857e5a89dc70 264 Gene3D G3DSA:3.40.190.10 32 250 7.2E-52 T 23-10-2018 DLM_1364 50387bdbca3b23dbd29d857e5a89dc70 264 SMART SM00062 37 258 8.0E-40 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1364 50387bdbca3b23dbd29d857e5a89dc70 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 256 2.0E-48 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_1364 50387bdbca3b23dbd29d857e5a89dc70 264 SUPERFAMILY SSF53850 29 258 5.44E-53 T 23-10-2018 DLM_1364 50387bdbca3b23dbd29d857e5a89dc70 264 Gene3D G3DSA:3.40.190.10 124 216 7.2E-52 T 23-10-2018 DLM_0201 48d4196381475ea8a6cec3aded97a6b1 109 Pfam PF06942 GlpM protein 2 108 3.2E-48 T 23-10-2018 IPR009707 Membrane protein GlpM/YdgC DLM_0201 48d4196381475ea8a6cec3aded97a6b1 109 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 11 108 4.0E-31 T 23-10-2018 IPR009707 Membrane protein GlpM/YdgC DLM_0031 6473d19be26b642743f553e653a1069d 294 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 283 3.6E-91 T 23-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DLM_0031 6473d19be26b642743f553e653a1069d 294 Gene3D G3DSA:1.10.357.140 14 167 1.1E-19 T 23-10-2018 DLM_0031 6473d19be26b642743f553e653a1069d 294 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 23-10-2018 IPR030470 UbiA prenyltransferase conserved site DLM_0031 6473d19be26b642743f553e653a1069d 294 Pfam PF01040 UbiA prenyltransferase family 19 269 4.4E-58 T 23-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DLM_0031 6473d19be26b642743f553e653a1069d 294 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 285 17.64 T 23-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DLM_1559 58a0e02d42865d847b9ef838fab2e371 416 Gene3D G3DSA:3.40.640.10 9 279 2.9E-69 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_1559 58a0e02d42865d847b9ef838fab2e371 416 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 412 3.9E-106 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_1559 58a0e02d42865d847b9ef838fab2e371 416 SUPERFAMILY SSF53383 9 413 5.19E-85 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_1559 58a0e02d42865d847b9ef838fab2e371 416 PIRSF PIRSF001434 1 416 1.4E-117 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DLM_1559 58a0e02d42865d847b9ef838fab2e371 416 Gene3D G3DSA:3.90.1150.10 280 415 1.7E-41 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3610 98fa24ca0abfcfe1e728ce57d37a764b 62 Pfam PF04328 Selenoprotein, putative 2 62 1.3E-19 T 23-10-2018 IPR007423 Selenoprotein, putative DLM_2493 6fc136105d0154d5785d2ea1bbb015a1 234 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 217 1.4E-37 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_2493 6fc136105d0154d5785d2ea1bbb015a1 234 Pfam PF01914 MarC family integral membrane protein 10 221 4.8E-42 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_2481 6b9fd1d52b7cd52afd0beac632cadf4a 320 SUPERFAMILY SSF103481 209 304 3.79E-11 T 23-10-2018 DLM_2481 6b9fd1d52b7cd52afd0beac632cadf4a 320 Pfam PF00892 EamA-like transporter family 164 298 8.0E-21 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_2481 6b9fd1d52b7cd52afd0beac632cadf4a 320 Pfam PF00892 EamA-like transporter family 14 148 2.3E-24 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_2481 6b9fd1d52b7cd52afd0beac632cadf4a 320 SUPERFAMILY SSF103481 49 151 1.57E-17 T 23-10-2018 DLM_2797 82e8d793b8e247fd17269683681e1694 407 Gene3D G3DSA:3.40.50.300 49 217 8.4E-20 T 23-10-2018 DLM_2797 82e8d793b8e247fd17269683681e1694 407 Pfam PF03969 AFG1-like ATPase 34 388 1.9E-131 T 23-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 DLM_2797 82e8d793b8e247fd17269683681e1694 407 SUPERFAMILY SSF52540 84 216 8.91E-16 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2630 7de1535c6ca294d8c74bd6130f1e80b7 93 Gene3D G3DSA:2.180.10.10 3 92 2.5E-6 T 23-10-2018 DLM_2630 7de1535c6ca294d8c74bd6130f1e80b7 93 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 60 91 5.2E-5 T 23-10-2018 IPR006530 YD repeat DLM_2630 7de1535c6ca294d8c74bd6130f1e80b7 93 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 53 75 5.0E-4 T 23-10-2018 IPR006530 YD repeat DLM_2630 7de1535c6ca294d8c74bd6130f1e80b7 93 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 17 53 5.1E-4 T 23-10-2018 IPR006530 YD repeat DLM_2630 7de1535c6ca294d8c74bd6130f1e80b7 93 Pfam PF05593 RHS Repeat 60 92 4.6E-7 T 23-10-2018 IPR031325 RHS repeat DLM_2630 7de1535c6ca294d8c74bd6130f1e80b7 93 Pfam PF05593 RHS Repeat 37 71 7.4E-7 T 23-10-2018 IPR031325 RHS repeat DLM_1317 eb9fd86033b05f838988b7ad1501b48f 195 SUPERFAMILY SSF51182 7 181 7.0E-14 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_1317 eb9fd86033b05f838988b7ad1501b48f 195 Pfam PF07883 Cupin domain 116 175 1.5E-9 T 23-10-2018 IPR013096 Cupin 2, conserved barrel DLM_0618 2d93a0933d60ba2227018bdd60391628 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 45 247 1.2E-46 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DLM_0618 2d93a0933d60ba2227018bdd60391628 254 Gene3D G3DSA:3.90.850.10 41 253 7.4E-54 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_0618 2d93a0933d60ba2227018bdd60391628 254 SUPERFAMILY SSF56529 43 248 2.88E-55 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DLM_0618 2d93a0933d60ba2227018bdd60391628 254 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 43 246 5.2E-74 T 23-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 DLM_1985 003e9e5d0cbe078277dad2e7e51eaf5e 181 Gene3D G3DSA:3.30.420.10 1 181 6.6E-75 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_1985 003e9e5d0cbe078277dad2e7e51eaf5e 181 Pfam PF00929 Exonuclease 9 170 5.3E-33 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_1985 003e9e5d0cbe078277dad2e7e51eaf5e 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.228 T 23-10-2018 IPR022894 Oligoribonuclease GO:0000175 DLM_1985 003e9e5d0cbe078277dad2e7e51eaf5e 181 SMART SM00479 7 180 1.3E-25 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_1985 003e9e5d0cbe078277dad2e7e51eaf5e 181 SUPERFAMILY SSF53098 2 180 4.45E-48 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1420 6b626e937dddb1afafd198c19e6eb68f 293 Gene3D G3DSA:1.10.3720.10 86 286 1.4E-27 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1420 6b626e937dddb1afafd198c19e6eb68f 293 SUPERFAMILY SSF161098 93 276 2.88E-36 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1420 6b626e937dddb1afafd198c19e6eb68f 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 1.2E-23 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1546 3edb977a315fa96c28134cf577719aa4 367 Pfam PF00296 Luciferase-like monooxygenase 9 328 4.9E-77 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DLM_1546 3edb977a315fa96c28134cf577719aa4 367 SUPERFAMILY SSF51679 6 360 2.09E-94 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_1546 3edb977a315fa96c28134cf577719aa4 367 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 8 357 9.9E-196 T 23-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 DLM_1546 3edb977a315fa96c28134cf577719aa4 367 Gene3D G3DSA:3.20.20.30 5 359 2.0E-109 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DLM_1128 4f42a02647ca55a68a9dbaa51d07ab71 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 23-10-2018 IPR000540 Flagellar motor protein MotA, conserved site DLM_1128 4f42a02647ca55a68a9dbaa51d07ab71 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 141 232 2.6E-8 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DLM_1128 4f42a02647ca55a68a9dbaa51d07ab71 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 282 1.6E-121 T 23-10-2018 IPR022522 Flagellar motor stator, MotA DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 Pfam PF03466 LysR substrate binding domain 89 294 4.7E-39 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 SUPERFAMILY SSF46785 2 112 2.79E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 Gene3D G3DSA:1.10.10.10 1 86 7.2E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 7.0E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 SUPERFAMILY SSF53850 92 297 3.62E-40 T 23-10-2018 DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.5E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 Gene3D G3DSA:3.40.190.10 92 302 3.1E-85 T 23-10-2018 DLM_1014 4c253f2d110efbcafd9e1afddc2c3591 309 Gene3D G3DSA:3.40.190.10 167 266 3.1E-85 T 23-10-2018 DLM_4557 b3bf622579afe7842c309bbb3e40c747 283 Gene3D G3DSA:3.90.25.10 176 270 6.0E-43 T 23-10-2018 DLM_4557 b3bf622579afe7842c309bbb3e40c747 283 Gene3D G3DSA:3.40.50.720 10 273 6.0E-43 T 23-10-2018 DLM_4557 b3bf622579afe7842c309bbb3e40c747 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 220 4.9E-24 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DLM_4557 b3bf622579afe7842c309bbb3e40c747 283 SUPERFAMILY SSF51735 6 263 1.12E-40 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2189 670939b48478b88632bb197449a27c48 218 SMART SM00749 155 218 0.043 T 23-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DLM_2189 670939b48478b88632bb197449a27c48 218 SMART SM00749 9 72 3.4 T 23-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DLM_2189 670939b48478b88632bb197449a27c48 218 Pfam PF04972 BON domain 4 70 2.6E-13 T 23-10-2018 IPR007055 BON domain DLM_2189 670939b48478b88632bb197449a27c48 218 Pfam PF04972 BON domain 79 146 4.0E-12 T 23-10-2018 IPR007055 BON domain DLM_2189 670939b48478b88632bb197449a27c48 218 Pfam PF04972 BON domain 153 216 1.9E-11 T 23-10-2018 IPR007055 BON domain DLM_0400 9bc135bcf1e3d8f871d4016bf45a8b08 233 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 154 230 4.9E-21 T 23-10-2018 IPR006260 TonB/TolA, C-terminal DLM_0400 9bc135bcf1e3d8f871d4016bf45a8b08 233 SUPERFAMILY SSF74653 148 228 3.14E-22 T 23-10-2018 DLM_0400 9bc135bcf1e3d8f871d4016bf45a8b08 233 Gene3D G3DSA:3.30.1150.10 133 230 2.2E-23 T 23-10-2018 DLM_0400 9bc135bcf1e3d8f871d4016bf45a8b08 233 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 152 230 1.7E-21 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 DLM_1789 f1cc4d4fcda876bd46f766e0ed05cc59 707 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 121 372 3.3E-86 T 23-10-2018 IPR008766 Replication gene A protein GO:0006260 DLM_1740 41d19052b2bb5c2a784d82f4dd0fecf4 222 Gene3D G3DSA:1.20.1050.10 84 212 4.7E-31 T 23-10-2018 DLM_1740 41d19052b2bb5c2a784d82f4dd0fecf4 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 2.4E-13 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_1740 41d19052b2bb5c2a784d82f4dd0fecf4 222 Gene3D G3DSA:3.40.30.10 1 80 2.6E-34 T 23-10-2018 DLM_1740 41d19052b2bb5c2a784d82f4dd0fecf4 222 SUPERFAMILY SSF47616 84 218 1.81E-22 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_1740 41d19052b2bb5c2a784d82f4dd0fecf4 222 SUPERFAMILY SSF52833 1 78 8.8E-20 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_1740 41d19052b2bb5c2a784d82f4dd0fecf4 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 142 207 4.0E-10 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal DLM_1542 acc50ffc29f96813962d6007a8fc94a9 280 SUPERFAMILY SSF51556 2 280 2.63E-49 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_1542 acc50ffc29f96813962d6007a8fc94a9 280 Pfam PF04909 Amidohydrolase 77 280 2.3E-27 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_1542 acc50ffc29f96813962d6007a8fc94a9 280 Gene3D G3DSA:3.20.20.140 1 279 6.2E-59 T 23-10-2018 DLM_1211 e6e71a5285fef1e57ef3f2abffe1815f 190 Pfam PF13460 NAD(P)H-binding 4 175 3.6E-41 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_1211 e6e71a5285fef1e57ef3f2abffe1815f 190 Gene3D G3DSA:3.40.50.720 1 190 2.0E-48 T 23-10-2018 DLM_1211 e6e71a5285fef1e57ef3f2abffe1815f 190 SUPERFAMILY SSF51735 1 177 2.11E-29 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2648 bcdbdb7153fe61aab5239774f57d370f 170 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 8 90 3.9E-36 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_4350 0958b3b735eb9745c969ac579048e2fc 229 Gene3D G3DSA:3.90.550.10 1 226 3.3E-54 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_4350 0958b3b735eb9745c969ac579048e2fc 229 Pfam PF00483 Nucleotidyl transferase 1 146 8.5E-20 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DLM_4350 0958b3b735eb9745c969ac579048e2fc 229 SUPERFAMILY SSF53448 1 223 1.33E-51 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_3043 f673746b52bd9d118a87d1711729ff94 87 Pfam PF13478 XdhC Rossmann domain 1 79 1.2E-9 T 23-10-2018 IPR027051 XdhC Rossmann domain DLM_3043 f673746b52bd9d118a87d1711729ff94 87 Gene3D G3DSA:3.40.50.720 1 83 2.2E-9 T 23-10-2018 DLM_3601 61886f9b14f00509255c55ee608f4593 66 SUPERFAMILY SSF56672 3 66 5.11E-15 T 23-10-2018 DLM_3601 61886f9b14f00509255c55ee608f4593 66 Pfam PF00476 DNA polymerase family A 2 63 5.8E-15 T 23-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DLM_3601 61886f9b14f00509255c55ee608f4593 66 Gene3D G3DSA:3.30.70.370 1 65 3.4E-15 T 23-10-2018 DLM_0840 58020fe401af85d95dc0be8978157317 203 SMART SM00903 22 178 8.7E-26 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DLM_0840 58020fe401af85d95dc0be8978157317 203 SUPERFAMILY SSF50475 4 195 6.38E-46 T 23-10-2018 DLM_0840 58020fe401af85d95dc0be8978157317 203 Pfam PF01613 Flavin reductase like domain 25 172 2.4E-21 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DLM_0840 58020fe401af85d95dc0be8978157317 203 Gene3D G3DSA:2.30.110.10 4 203 8.6E-67 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DLM_2847 18a51284911bbadd1d5f7651156b0b63 92 Pfam PF05488 PAAR motif 9 77 5.8E-12 T 23-10-2018 IPR008727 PAAR motif DLM_2414 cb98cb7075433228d55cade8883c1f08 184 Gene3D G3DSA:3.40.50.300 1 135 1.1E-25 T 23-10-2018 DLM_2414 cb98cb7075433228d55cade8883c1f08 184 Hamap MF_00124 Thymidine kinase [tdk]. 1 184 31.671 T 23-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DLM_2414 cb98cb7075433228d55cade8883c1f08 184 SUPERFAMILY SSF57716 137 183 7.6E-12 T 23-10-2018 DLM_2414 cb98cb7075433228d55cade8883c1f08 184 Gene3D G3DSA:3.30.60.20 138 184 8.3E-7 T 23-10-2018 DLM_2414 cb98cb7075433228d55cade8883c1f08 184 PIRSF PIRSF035805 1 184 4.1E-51 T 23-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DLM_2414 cb98cb7075433228d55cade8883c1f08 184 SUPERFAMILY SSF52540 1 137 4.43E-34 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2414 cb98cb7075433228d55cade8883c1f08 184 Pfam PF00265 Thymidine kinase 3 181 1.4E-42 T 23-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DLM_0559 4d8d85eaa0b9f275946d34c5707c8f77 288 Gene3D G3DSA:1.10.10.10 6 81 4.3E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0559 4d8d85eaa0b9f275946d34c5707c8f77 288 Pfam PF01380 SIS domain 141 268 1.7E-26 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_0559 4d8d85eaa0b9f275946d34c5707c8f77 288 Gene3D G3DSA:3.40.50.10490 108 282 1.3E-33 T 23-10-2018 DLM_0559 4d8d85eaa0b9f275946d34c5707c8f77 288 SUPERFAMILY SSF53697 111 271 4.85E-28 T 23-10-2018 DLM_0559 4d8d85eaa0b9f275946d34c5707c8f77 288 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 82 1.9E-13 T 23-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DLM_0559 4d8d85eaa0b9f275946d34c5707c8f77 288 SUPERFAMILY SSF46689 10 81 3.23E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_4023 931195984852b55183627adc44ab7c72 231 PIRSF PIRSF004848 1 231 3.4E-79 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DLM_4023 931195984852b55183627adc44ab7c72 231 Gene3D G3DSA:3.20.20.10 1 231 3.7E-92 T 23-10-2018 IPR029066 PLP-binding barrel DLM_4023 931195984852b55183627adc44ab7c72 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 7 226 32.72 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DLM_4023 931195984852b55183627adc44ab7c72 231 Pfam PF01168 Alanine racemase, N-terminal domain 16 227 6.8E-34 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DLM_4023 931195984852b55183627adc44ab7c72 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DLM_4023 931195984852b55183627adc44ab7c72 231 SUPERFAMILY SSF51419 4 225 1.83E-82 T 23-10-2018 IPR029066 PLP-binding barrel DLM_4023 931195984852b55183627adc44ab7c72 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 4 227 6.6E-78 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DLM_1209 7e6052ea5ed7cef559b96dcea12e71bc 382 Gene3D G3DSA:3.40.50.1970 1 184 1.7E-47 T 23-10-2018 DLM_1209 7e6052ea5ed7cef559b96dcea12e71bc 382 SUPERFAMILY SSF56796 1 379 3.4E-98 T 23-10-2018 DLM_1209 7e6052ea5ed7cef559b96dcea12e71bc 382 Gene3D G3DSA:1.20.1090.10 186 381 2.9E-39 T 23-10-2018 DLM_1209 7e6052ea5ed7cef559b96dcea12e71bc 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 1.9E-90 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DLM_3129 7dede4f09f03bfdb4fd89fc58da46d62 108 Pfam PF02583 Metal-sensitive transcriptional repressor 26 106 5.6E-30 T 23-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 DLM_3129 7dede4f09f03bfdb4fd89fc58da46d62 108 Gene3D G3DSA:1.20.58.1000 6 108 3.0E-33 T 23-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily DLM_3167 920b3b4b516e07f015c3298497bcfd92 121 Pfam PF07238 PilZ domain 15 101 6.1E-11 T 23-10-2018 IPR009875 PilZ domain GO:0035438 DLM_3167 920b3b4b516e07f015c3298497bcfd92 121 Gene3D G3DSA:2.40.10.220 7 121 8.7E-45 T 23-10-2018 DLM_0395 35b412b9d3c82eb02e5d553e390929b2 222 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 1 215 28.203 T 23-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 DLM_0395 35b412b9d3c82eb02e5d553e390929b2 222 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 205 6.1E-46 T 23-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 DLM_0395 35b412b9d3c82eb02e5d553e390929b2 222 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 1 210 1.7E-90 T 23-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 DLM_0395 35b412b9d3c82eb02e5d553e390929b2 222 Gene3D G3DSA:1.10.1760.20 1 210 6.3E-49 T 23-10-2018 DLM_3494 4b5d4f489695d2ba1ced685e55fbee73 194 Pfam PF11745 Protein of unknown function (DUF3304) 76 164 4.9E-21 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_4387 905e936096bf6fac3f0cac67c77a4c84 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.9E-66 T 23-10-2018 IPR023798 Ribosomal protein S7 domain DLM_4387 905e936096bf6fac3f0cac67c77a4c84 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.123 T 23-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DLM_4387 905e936096bf6fac3f0cac67c77a4c84 156 SUPERFAMILY SSF47973 2 149 2.22E-60 T 23-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DLM_4387 905e936096bf6fac3f0cac67c77a4c84 156 PIRSF PIRSF002122 3 156 4.6E-57 T 23-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DLM_4387 905e936096bf6fac3f0cac67c77a4c84 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4387 905e936096bf6fac3f0cac67c77a4c84 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 6.4E-65 T 23-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DLM_4387 905e936096bf6fac3f0cac67c77a4c84 156 Gene3D G3DSA:1.10.455.10 2 155 1.6E-60 T 23-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DLM_3126 8b50e8a7dd4c21faccc46d1587f2317e 99 Pfam PF00436 Single-strand binding protein family 3 85 9.3E-6 T 23-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DLM_3126 8b50e8a7dd4c21faccc46d1587f2317e 99 PIRSF PIRSF003135 1 98 7.5E-19 T 23-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DLM_3126 8b50e8a7dd4c21faccc46d1587f2317e 99 Gene3D G3DSA:2.40.50.140 2 99 8.0E-29 T 23-10-2018 DLM_3126 8b50e8a7dd4c21faccc46d1587f2317e 99 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 96 5.1E-29 T 23-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DLM_3126 8b50e8a7dd4c21faccc46d1587f2317e 99 Hamap MF_00720 Primosomal replication protein N [priB]. 2 97 20.536 T 23-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DLM_3126 8b50e8a7dd4c21faccc46d1587f2317e 99 SUPERFAMILY SSF50249 2 98 1.99E-18 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_3559 c2ad14b8963617e3ddd60b6f32c39993 320 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 20 312 2.9E-112 T 23-10-2018 IPR005911 Protein YhcC-like GO:0051536 DLM_3559 c2ad14b8963617e3ddd60b6f32c39993 320 SUPERFAMILY SSF102114 24 265 1.57E-44 T 23-10-2018 DLM_3559 c2ad14b8963617e3ddd60b6f32c39993 320 Pfam PF16199 Radical_SAM C-terminal domain 219 296 4.6E-17 T 23-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 DLM_3559 c2ad14b8963617e3ddd60b6f32c39993 320 SMART SM00729 35 258 2.8E-38 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DLM_3559 c2ad14b8963617e3ddd60b6f32c39993 320 Gene3D G3DSA:3.80.30.20 53 250 6.7E-17 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DLM_3559 c2ad14b8963617e3ddd60b6f32c39993 320 Pfam PF04055 Radical SAM superfamily 55 213 6.5E-14 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DLM_2110 7a796772f1e965ea12e94861c3c119e3 207 Pfam PF11363 Protein of unknown function (DUF3164) 12 205 2.1E-86 T 23-10-2018 IPR021505 Bacteriophage B3, Orf6 DLM_0767 7a796772f1e965ea12e94861c3c119e3 207 Pfam PF11363 Protein of unknown function (DUF3164) 12 205 2.1E-86 T 23-10-2018 IPR021505 Bacteriophage B3, Orf6 DLM_4489 173d43fdce61b3120b37dd77c534396b 272 SMART SM00382 31 220 3.7E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4489 173d43fdce61b3120b37dd77c534396b 272 SUPERFAMILY SSF52540 5 235 4.95E-68 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4489 173d43fdce61b3120b37dd77c534396b 272 Pfam PF00005 ABC transporter 22 170 1.2E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4489 173d43fdce61b3120b37dd77c534396b 272 Gene3D G3DSA:3.40.50.300 4 247 3.0E-68 T 23-10-2018 DLM_4489 173d43fdce61b3120b37dd77c534396b 272 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_4432 87ce9f7e0018e66d120eea9842011950 312 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 304 9.7E-51 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_4276 abbf7b470a32208451987f92ae45c14e 176 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 23-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 DLM_4276 abbf7b470a32208451987f92ae45c14e 176 Gene3D G3DSA:3.30.1330.60 55 174 7.7E-37 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_4276 abbf7b470a32208451987f92ae45c14e 176 PRINTS PR01021 OMPA domain signature 118 134 7.2E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_4276 abbf7b470a32208451987f92ae45c14e 176 PRINTS PR01021 OMPA domain signature 73 95 7.2E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_4276 abbf7b470a32208451987f92ae45c14e 176 PRINTS PR01021 OMPA domain signature 103 118 7.2E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DLM_4276 abbf7b470a32208451987f92ae45c14e 176 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 1 173 28.036 T 23-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 DLM_4276 abbf7b470a32208451987f92ae45c14e 176 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 173 8.8E-39 T 23-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 DLM_4276 abbf7b470a32208451987f92ae45c14e 176 Pfam PF00691 OmpA family 72 167 4.3E-21 T 23-10-2018 IPR006665 OmpA-like domain DLM_4276 abbf7b470a32208451987f92ae45c14e 176 SUPERFAMILY SSF103088 66 172 3.27E-30 T 23-10-2018 IPR036737 OmpA-like domain superfamily DLM_3052 ccfb0665cbf8ab9f82a21c736db95818 419 Pfam PF06181 Urate oxidase N-terminal 4 306 1.7E-116 T 23-10-2018 IPR010389 Urate oxidase N-terminal DLM_3492 8c9197d107a288708f2b262aeaa19271 174 Pfam PF11745 Protein of unknown function (DUF3304) 59 144 2.2E-18 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_2913 5e09a261364be92d5d92ae42630dbf87 150 SUPERFAMILY SSF55961 6 148 1.65E-33 T 23-10-2018 DLM_2913 5e09a261364be92d5d92ae42630dbf87 150 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 15 139 2.2E-30 T 23-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 DLM_2913 5e09a261364be92d5d92ae42630dbf87 150 Gene3D G3DSA:3.30.530.20 7 149 8.6E-36 T 23-10-2018 IPR023393 START-like domain superfamily DLM_0916 e688062183166e70395f498334c21123 93 Gene3D G3DSA:1.10.760.10 3 91 6.5E-21 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_0916 e688062183166e70395f498334c21123 93 SUPERFAMILY SSF46626 11 87 5.38E-12 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2170 9501750d829632021aa8d03cc9307554 336 Pfam PF03239 Iron permease FTR1 family 56 310 4.3E-52 T 23-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 DLM_0030 65e35b260d6c9683a92d19bfc76336d6 107 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 18 91 8.3E-17 T 23-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DLM_0030 65e35b260d6c9683a92d19bfc76336d6 107 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 11 105 1.5E-32 T 23-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 DLM_1786 308b562389fbc600d6a69a81c59f4a77 201 Gene3D G3DSA:3.40.50.300 6 200 9.7E-26 T 23-10-2018 DLM_1786 308b562389fbc600d6a69a81c59f4a77 201 SUPERFAMILY SSF52540 12 180 4.08E-8 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0468 7b13bca1e90678bd5bb7732da15ef849 161 SUPERFAMILY SSF55136 12 160 4.36E-21 T 23-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DLM_0468 7b13bca1e90678bd5bb7732da15ef849 161 SMART SM00871 2 161 4.3E-19 T 23-10-2018 IPR010499 Bacterial transcription activator, effector binding DLM_0468 7b13bca1e90678bd5bb7732da15ef849 161 Gene3D G3DSA:3.20.80.10 3 161 1.0E-26 T 23-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DLM_0468 7b13bca1e90678bd5bb7732da15ef849 161 Pfam PF06445 GyrI-like small molecule binding domain 7 160 3.2E-21 T 23-10-2018 IPR029442 GyrI-like small molecule binding domain DLM_4154 48d244f85fdf37d240e32d32a3bc79d8 273 Pfam PF13679 Methyltransferase domain 34 173 7.2E-43 T 23-10-2018 IPR025714 Methyltransferase domain DLM_4154 48d244f85fdf37d240e32d32a3bc79d8 273 Gene3D G3DSA:3.40.50.150 37 192 6.2E-6 T 23-10-2018 DLM_4154 48d244f85fdf37d240e32d32a3bc79d8 273 SUPERFAMILY SSF53335 34 172 2.98E-15 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_2664 c3724cfb4894b74fb13e2506ef919cac 169 ProDom PD055258 NMA1328 HI1402 103 166 4.0E-4 T 23-10-2018 IPR020088 Uncharacterised protein family HI1402 DLM_1316 e36016a2a0ba3609d4b5aba70b37e7f3 271 Gene3D G3DSA:3.50.30.50 6 270 6.3E-49 T 23-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DLM_1316 e36016a2a0ba3609d4b5aba70b37e7f3 271 Pfam PF04199 Putative cyclase 14 198 4.9E-37 T 23-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DLM_1316 e36016a2a0ba3609d4b5aba70b37e7f3 271 SUPERFAMILY SSF102198 11 268 1.57E-56 T 23-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DLM_2861 0a805908a0349ac795b2ca3a96f23ea6 59 Pfam PF01783 Ribosomal L32p protein family 2 55 7.6E-20 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2861 0a805908a0349ac795b2ca3a96f23ea6 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.538 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2861 0a805908a0349ac795b2ca3a96f23ea6 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 5.4E-20 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DLM_2861 0a805908a0349ac795b2ca3a96f23ea6 59 SUPERFAMILY SSF57829 2 54 1.53E-17 T 23-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DLM_4264 7db3c3525040deb49c52e47cdd3b4612 271 SUPERFAMILY SSF53850 22 246 3.69E-32 T 23-10-2018 DLM_4264 7db3c3525040deb49c52e47cdd3b4612 271 Gene3D G3DSA:3.40.190.10 104 203 1.2E-23 T 23-10-2018 DLM_4264 7db3c3525040deb49c52e47cdd3b4612 271 SMART SM00062 21 246 0.0013 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_4264 7db3c3525040deb49c52e47cdd3b4612 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 244 7.1E-20 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_4264 7db3c3525040deb49c52e47cdd3b4612 271 Gene3D G3DSA:3.40.190.10 27 242 1.2E-23 T 23-10-2018 DLM_0307 609d1c608b34b25290722ef5456cf57c 270 Gene3D G3DSA:3.40.50.300 1 260 4.1E-70 T 23-10-2018 DLM_0307 609d1c608b34b25290722ef5456cf57c 270 SUPERFAMILY SSF52540 2 267 4.23E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0307 609d1c608b34b25290722ef5456cf57c 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 8.1E-106 T 23-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 DLM_0307 609d1c608b34b25290722ef5456cf57c 270 PIRSF PIRSF003092 1 270 2.1E-91 T 23-10-2018 IPR025501 ATP binding protein MinD DLM_0307 609d1c608b34b25290722ef5456cf57c 270 Pfam PF13614 AAA domain 3 158 6.1E-20 T 23-10-2018 IPR025669 AAA domain DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 Gene3D G3DSA:2.40.110.10 133 230 1.4E-27 T 23-10-2018 DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 32 128 2.9E-11 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 PIRSF PIRSF016578 12 396 4.8E-33 T 23-10-2018 DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 SUPERFAMILY SSF47203 245 398 8.86E-19 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 Gene3D G3DSA:1.10.540.10 25 132 1.1E-27 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 383 6.4E-17 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 Gene3D G3DSA:1.20.140.10 234 408 3.8E-58 T 23-10-2018 DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 219 3.2E-11 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DLM_1527 fbe86e3187e08ba810a33e44a0680b7a 408 SUPERFAMILY SSF56645 30 231 9.16E-46 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DLM_0038 675b70c835b44294d96b0c79d4b4df26 142 Pfam PF13511 Domain of unknown function (DUF4124) 7 55 1.8E-6 T 23-10-2018 IPR025392 Domain of unknown function DUF4124 DLM_2544 87912e59cf1f5c70bfe9bb6846b86cd5 482 SMART SM00283 43 307 1.7E-13 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2544 87912e59cf1f5c70bfe9bb6846b86cd5 482 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 119 251 3.1E-26 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2544 87912e59cf1f5c70bfe9bb6846b86cd5 482 Gene3D G3DSA:1.10.287.950 16 343 1.1E-41 T 23-10-2018 DLM_2544 87912e59cf1f5c70bfe9bb6846b86cd5 482 SUPERFAMILY SSF58104 29 305 6.28E-43 T 23-10-2018 DLM_0826 3d1b0724aece20203547a50c716da922 387 Pfam PF03824 High-affinity nickel-transport protein 265 383 3.0E-10 T 23-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DLM_0826 3d1b0724aece20203547a50c716da922 387 Pfam PF03824 High-affinity nickel-transport protein 15 117 5.0E-17 T 23-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DLM_3153 64d62ba38d0be2892ae20216d1cdefde 355 SUPERFAMILY SSF53056 151 316 9.03E-30 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DLM_3153 64d62ba38d0be2892ae20216d1cdefde 355 SMART SM00947 178 319 1.1E-22 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DLM_3153 64d62ba38d0be2892ae20216d1cdefde 355 Pfam PF00484 Carbonic anhydrase 186 270 4.0E-20 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DLM_3153 64d62ba38d0be2892ae20216d1cdefde 355 Gene3D G3DSA:3.40.1050.10 137 325 7.1E-31 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DLM_0173 eef03c3d15a15bbad4bf4303788ac944 209 Pfam PF01810 LysE type translocator 16 204 4.6E-35 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_0173 eef03c3d15a15bbad4bf4303788ac944 209 PIRSF PIRSF006324 1 207 1.9E-55 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_0399 915d7adb6e42a5e9e556b3a13a6627af 757 Gene3D G3DSA:2.170.130.10 26 168 2.2E-9 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DLM_0399 915d7adb6e42a5e9e556b3a13a6627af 757 SUPERFAMILY SSF56935 37 757 8.9E-82 T 23-10-2018 DLM_0399 915d7adb6e42a5e9e556b3a13a6627af 757 Pfam PF00593 TonB dependent receptor 294 755 1.6E-49 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DLM_0399 915d7adb6e42a5e9e556b3a13a6627af 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 163 4.7E-9 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_0399 915d7adb6e42a5e9e556b3a13a6627af 757 Gene3D G3DSA:2.40.170.20 209 757 5.3E-67 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 SUPERFAMILY SSF55874 298 459 9.82E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 SUPERFAMILY SSF47384 224 304 3.14E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 SMART SM00387 351 461 2.6E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 Gene3D G3DSA:3.30.565.10 312 462 2.7E-27 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 450 1.6E-12 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 2.3E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.3E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 Gene3D G3DSA:1.10.287.130 191 306 8.0E-16 T 23-10-2018 DLM_2968 015a9b786ccccdbfa46a3e3ab1388e49 464 SMART SM00388 241 306 2.4E-6 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DLM_0125 315523e663142ae4399a89737e5df858 185 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 13 182 5.7E-66 T 23-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DLM_0125 315523e663142ae4399a89737e5df858 185 Pfam PF00156 Phosphoribosyl transferase domain 56 161 1.0E-13 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DLM_0125 315523e663142ae4399a89737e5df858 185 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 13 182 36.512 T 23-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DLM_0125 315523e663142ae4399a89737e5df858 185 SUPERFAMILY SSF53271 13 182 5.77E-52 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like DLM_0125 315523e663142ae4399a89737e5df858 185 Gene3D G3DSA:3.40.50.2020 5 185 6.7E-60 T 23-10-2018 DLM_0901 a1e982253edf8c3637506050c1eb887e 48 SUPERFAMILY SSF51306 1 46 1.27E-6 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DLM_0772 c898cc3ec5dd169bcf3bc050ae17f230 138 Pfam PF06252 Protein of unknown function (DUF1018) 21 133 2.1E-26 T 23-10-2018 IPR009363 Bacteriophage Mu, Gp16 DLM_2814 144b23059823bc02df6bf63da014fbe4 505 Pfam PF07690 Major Facilitator Superfamily 30 424 9.4E-27 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2814 144b23059823bc02df6bf63da014fbe4 505 Gene3D G3DSA:1.20.1250.20 275 503 1.5E-6 T 23-10-2018 DLM_2814 144b23059823bc02df6bf63da014fbe4 505 SUPERFAMILY SSF103473 25 501 8.37E-32 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2814 144b23059823bc02df6bf63da014fbe4 505 Gene3D G3DSA:1.20.1720.10 24 230 5.9E-21 T 23-10-2018 DLM_3267 c8f6cf7aa51af634d42106aeaf555373 417 Gene3D G3DSA:3.30.9.10 116 347 2.9E-112 T 23-10-2018 DLM_3267 c8f6cf7aa51af634d42106aeaf555373 417 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 4 409 2.5E-215 T 23-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DLM_3267 c8f6cf7aa51af634d42106aeaf555373 417 Gene3D G3DSA:3.50.50.60 35 390 2.9E-112 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3267 c8f6cf7aa51af634d42106aeaf555373 417 SUPERFAMILY SSF51905 33 405 6.24E-53 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3267 c8f6cf7aa51af634d42106aeaf555373 417 Pfam PF01266 FAD dependent oxidoreductase 35 381 1.3E-54 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_2258 44ffd820a5950b792243927274458a03 191 Pfam PF01553 Acyltransferase 41 146 4.2E-9 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DLM_2258 44ffd820a5950b792243927274458a03 191 SMART SM00563 41 153 3.8E-22 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DLM_2258 44ffd820a5950b792243927274458a03 191 SUPERFAMILY SSF69593 19 163 9.55E-20 T 23-10-2018 DLM_2761 597b2c9c7f1690a23fcbfed12506583b 267 SUPERFAMILY SSF52540 24 250 2.45E-33 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_2761 597b2c9c7f1690a23fcbfed12506583b 267 Gene3D G3DSA:3.40.50.300 16 185 2.6E-30 T 23-10-2018 DLM_2761 597b2c9c7f1690a23fcbfed12506583b 267 Pfam PF07728 AAA domain (dynein-related subfamily) 33 167 1.8E-33 T 23-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 DLM_2761 597b2c9c7f1690a23fcbfed12506583b 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 180 262 6.8E-29 T 23-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal DLM_4152 56a0f9ec25e66377dadf7ce30f7b1ec3 111 Gene3D G3DSA:1.10.10.10 3 108 1.2E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_4152 56a0f9ec25e66377dadf7ce30f7b1ec3 111 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 85 5.2E-24 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DLM_4152 56a0f9ec25e66377dadf7ce30f7b1ec3 111 SUPERFAMILY SSF46767 4 86 1.03E-22 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DLM_2394 243652af95c33a5bd5f0e4c7ce0d7f73 519 Gene3D G3DSA:1.10.132.100 373 506 6.4E-8 T 23-10-2018 DLM_2394 243652af95c33a5bd5f0e4c7ce0d7f73 519 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 7 465 9.8E-89 T 23-10-2018 IPR013381 CRISPR-associated protein Cse1 DLM_2394 243652af95c33a5bd5f0e4c7ce0d7f73 519 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 7 493 1.2E-47 T 23-10-2018 IPR013381 CRISPR-associated protein Cse1 DLM_2420 78efae718a7c3c77794e015d3bc51e59 261 PRINTS PR01837 MgtC/SapB protein signature 117 141 7.9E-39 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_2420 78efae718a7c3c77794e015d3bc51e59 261 PRINTS PR01837 MgtC/SapB protein signature 45 64 7.9E-39 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_2420 78efae718a7c3c77794e015d3bc51e59 261 PRINTS PR01837 MgtC/SapB protein signature 64 82 7.9E-39 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_2420 78efae718a7c3c77794e015d3bc51e59 261 PRINTS PR01837 MgtC/SapB protein signature 90 112 7.9E-39 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_2420 78efae718a7c3c77794e015d3bc51e59 261 Gene3D G3DSA:3.30.70.260 171 261 3.2E-9 T 23-10-2018 DLM_2420 78efae718a7c3c77794e015d3bc51e59 261 Pfam PF02308 MgtC family 42 162 2.1E-32 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DLM_1522 9dcb72d3d9c46644ceb2800ef8fe7831 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 182 3.5E-5 T 23-10-2018 DLM_1522 9dcb72d3d9c46644ceb2800ef8fe7831 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 237 4.4E-37 T 23-10-2018 DLM_1522 9dcb72d3d9c46644ceb2800ef8fe7831 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.5E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1522 9dcb72d3d9c46644ceb2800ef8fe7831 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 1.5E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1522 9dcb72d3d9c46644ceb2800ef8fe7831 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.5E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1522 9dcb72d3d9c46644ceb2800ef8fe7831 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.5E-17 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DLM_1522 9dcb72d3d9c46644ceb2800ef8fe7831 240 Gene3D G3DSA:3.40.50.720 1 239 1.7E-55 T 23-10-2018 DLM_1522 9dcb72d3d9c46644ceb2800ef8fe7831 240 SUPERFAMILY SSF51735 4 239 4.15E-54 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1254 0c81c474508dc9bbc94487372b0e7766 110 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 15 106 1.6E-14 T 23-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 DLM_1254 0c81c474508dc9bbc94487372b0e7766 110 Pfam PF06890 Bacteriophage Mu Gp45 protein 20 108 3.4E-29 T 23-10-2018 IPR014462 Phage-associated protein Gp45 DLM_2501 adfa122be63ff5abeacc386dfeed16c8 414 Pfam PF03060 Nitronate monooxygenase 17 306 2.9E-24 T 23-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DLM_2501 adfa122be63ff5abeacc386dfeed16c8 414 SUPERFAMILY SSF51412 17 340 6.41E-31 T 23-10-2018 DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 SUPERFAMILY SSF48008 79 214 1.02E-25 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 9.2E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 Gene3D G3DSA:1.20.120.530 78 222 3.8E-28 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 SMART SM00895 84 208 1.4E-16 T 23-10-2018 IPR011711 GntR, C-terminal DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 SUPERFAMILY SSF46785 5 83 8.54E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 Gene3D G3DSA:1.10.10.10 2 75 1.0E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.0E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.0E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 SMART SM00345 16 74 4.3E-17 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DLM_2617 88803a0719704619b99c21b21fdfb8ff 223 Pfam PF07729 FCD domain 84 206 2.3E-23 T 23-10-2018 IPR011711 GntR, C-terminal DLM_4309 1b82d62ada0e8ddf51b32f23c93b7362 345 Pfam PF01476 LysM domain 33 80 6.0E-15 T 23-10-2018 IPR018392 LysM domain DLM_4309 1b82d62ada0e8ddf51b32f23c93b7362 345 Gene3D G3DSA:3.10.350.10 31 79 2.8E-14 T 23-10-2018 IPR036779 LysM domain superfamily DLM_4309 1b82d62ada0e8ddf51b32f23c93b7362 345 SMART SM00257 32 81 7.3E-7 T 23-10-2018 IPR018392 LysM domain DLM_4309 1b82d62ada0e8ddf51b32f23c93b7362 345 SUPERFAMILY SSF54106 31 80 1.44E-7 T 23-10-2018 DLM_4371 2cc41a37949bbd35565b564b2bc45669 83 SUPERFAMILY SSF54862 5 76 1.68E-19 T 23-10-2018 DLM_4371 2cc41a37949bbd35565b564b2bc45669 83 Pfam PF00037 4Fe-4S binding domain 6 25 5.9E-6 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DLM_4371 2cc41a37949bbd35565b564b2bc45669 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DLM_4371 2cc41a37949bbd35565b564b2bc45669 83 Gene3D G3DSA:3.30.70.20 2 83 2.4E-34 T 23-10-2018 DLM_0245 7dafd261ad305d60e030e6957a037ef3 205 Pfam PF03006 Haemolysin-III related 5 197 4.5E-40 T 23-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 DLM_0245 7dafd261ad305d60e030e6957a037ef3 205 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 204 2.0E-67 T 23-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 DLM_2993 31551881865e9b574d2309aed27fb68f 249 Pfam PF09836 Putative DNA-binding domain 7 93 4.0E-20 T 23-10-2018 IPR018640 Putative DNA-binding domain, bacteria DLM_0897 ada4993d05a9768d22510a86bcb51406 237 Gene3D G3DSA:3.40.50.300 9 155 3.9E-9 T 23-10-2018 DLM_0897 ada4993d05a9768d22510a86bcb51406 237 SUPERFAMILY SSF52540 28 219 8.07E-14 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0897 ada4993d05a9768d22510a86bcb51406 237 Pfam PF13401 AAA domain 29 138 2.6E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_3975 5b93ba5ac002c7cab21dacd6489f3940 404 Pfam PF00999 Sodium/hydrogen exchanger family 15 388 1.8E-72 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DLM_3975 5b93ba5ac002c7cab21dacd6489f3940 404 Gene3D G3DSA:1.20.1530.20 6 401 6.8E-78 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily DLM_2088 990a0837e3962959621784fb6fe175a5 143 Pfam PF07030 Protein of unknown function (DUF1320) 7 126 3.4E-34 T 23-10-2018 IPR009752 Bacteriophage Mu, Gp36 DLM_3576 c01568eb99fc2d2257a66237c51dcdec 116 Pfam PF03960 ArsC family 5 112 1.5E-16 T 23-10-2018 IPR006660 Arsenate reductase-like DLM_3576 c01568eb99fc2d2257a66237c51dcdec 116 Gene3D G3DSA:3.40.30.10 1 116 1.9E-45 T 23-10-2018 DLM_3576 c01568eb99fc2d2257a66237c51dcdec 116 SUPERFAMILY SSF52833 1 114 4.79E-35 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3576 c01568eb99fc2d2257a66237c51dcdec 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 114 7.6E-41 T 23-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 DLM_2756 bb8eb22bc863a1259dbd3b290dd82c62 102 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 20 99 1.6E-6 T 23-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2756 bb8eb22bc863a1259dbd3b290dd82c62 102 SUPERFAMILY SSF46626 22 101 4.3E-14 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2756 bb8eb22bc863a1259dbd3b290dd82c62 102 PRINTS PR00606 Class ID cytochrome C signature 42 55 7.2E-16 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_2756 bb8eb22bc863a1259dbd3b290dd82c62 102 PRINTS PR00606 Class ID cytochrome C signature 27 40 7.2E-16 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_2756 bb8eb22bc863a1259dbd3b290dd82c62 102 PRINTS PR00606 Class ID cytochrome C signature 79 89 7.2E-16 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_2756 bb8eb22bc863a1259dbd3b290dd82c62 102 PRINTS PR00606 Class ID cytochrome C signature 91 101 7.2E-16 T 23-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 DLM_2756 bb8eb22bc863a1259dbd3b290dd82c62 102 Gene3D G3DSA:1.10.760.10 25 102 1.8E-29 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_3536 793c0a0343331fd1cb3a0968f76f04db 127 Gene3D G3DSA:1.25.40.10 40 111 1.8E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_0101 c5466f81bdef0e971b9e0585a6d2854e 205 Pfam PF01728 FtsJ-like methyltransferase 28 203 1.2E-55 T 23-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DLM_0101 c5466f81bdef0e971b9e0585a6d2854e 205 Gene3D G3DSA:3.40.50.150 27 205 1.1E-59 T 23-10-2018 DLM_0101 c5466f81bdef0e971b9e0585a6d2854e 205 PIRSF PIRSF005461 1 205 1.9E-76 T 23-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DLM_0101 c5466f81bdef0e971b9e0585a6d2854e 205 SUPERFAMILY SSF53335 27 204 6.78E-42 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_0101 c5466f81bdef0e971b9e0585a6d2854e 205 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 30.492 T 23-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DLM_2788 53049c667e2f7f2c807ff7d770a2ded6 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 313 3.4E-18 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_2788 53049c667e2f7f2c807ff7d770a2ded6 317 Gene3D G3DSA:1.10.3720.10 73 316 1.3E-61 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2788 53049c667e2f7f2c807ff7d770a2ded6 317 SUPERFAMILY SSF161098 77 304 4.97E-53 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2788 53049c667e2f7f2c807ff7d770a2ded6 317 SUPERFAMILY SSF160964 34 65 4.32E-5 T 23-10-2018 DLM_1796 4d0e0cfc45196fea603143ef6d566f9f 340 PIRSF PIRSF015283 1 340 1.2E-87 T 23-10-2018 IPR016631 Regulatory, RpfE DLM_1796 4d0e0cfc45196fea603143ef6d566f9f 340 Gene3D G3DSA:3.30.70.2130 82 206 2.0E-6 T 23-10-2018 DLM_3055 7da45703bd092dee7e165618b4c0a920 259 Gene3D G3DSA:3.20.20.150 1 259 2.4E-73 T 23-10-2018 DLM_3055 7da45703bd092dee7e165618b4c0a920 259 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 254 2.2E-114 T 23-10-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 DLM_3055 7da45703bd092dee7e165618b4c0a920 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.3E-31 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DLM_3055 7da45703bd092dee7e165618b4c0a920 259 PIRSF PIRSF006241 1 259 1.3E-89 T 23-10-2018 IPR026040 Hydroxypyruvate isomerase-like DLM_3055 7da45703bd092dee7e165618b4c0a920 259 SUPERFAMILY SSF51658 1 258 6.15E-83 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_2167 6a3c0a2ba31f8a83a54c8ea0b205ac82 426 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 66 412 6.9E-100 T 23-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DLM_2167 6a3c0a2ba31f8a83a54c8ea0b205ac82 426 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 15 423 2.7E-152 T 23-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 DLM_2167 6a3c0a2ba31f8a83a54c8ea0b205ac82 426 Pfam PF04261 Dyp-type peroxidase family 66 412 7.4E-110 T 23-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DLM_2167 6a3c0a2ba31f8a83a54c8ea0b205ac82 426 SUPERFAMILY SSF54909 59 416 1.79E-92 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_2069 156c0d14d292ef29f896057204512121 317 Pfam PF03466 LysR substrate binding domain 104 312 6.6E-20 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_2069 156c0d14d292ef29f896057204512121 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 77 8.2E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2069 156c0d14d292ef29f896057204512121 317 Gene3D G3DSA:3.40.190.10 183 287 1.0E-28 T 23-10-2018 DLM_2069 156c0d14d292ef29f896057204512121 317 Gene3D G3DSA:3.40.190.10 108 304 1.0E-28 T 23-10-2018 DLM_2069 156c0d14d292ef29f896057204512121 317 SUPERFAMILY SSF53850 108 315 2.24E-21 T 23-10-2018 DLM_2069 156c0d14d292ef29f896057204512121 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 4.4E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2069 156c0d14d292ef29f896057204512121 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 4.4E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2069 156c0d14d292ef29f896057204512121 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 4.4E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_2069 156c0d14d292ef29f896057204512121 317 SUPERFAMILY SSF46785 15 126 1.66E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2069 156c0d14d292ef29f896057204512121 317 Gene3D G3DSA:1.10.10.10 16 104 9.8E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1849 c32b6a8a98844c210d4e7b098ea29f15 205 Pfam PF00929 Exonuclease 10 165 6.4E-24 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_1849 c32b6a8a98844c210d4e7b098ea29f15 205 SUPERFAMILY SSF53098 7 174 2.08E-47 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_1849 c32b6a8a98844c210d4e7b098ea29f15 205 SMART SM00479 7 174 4.3E-34 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DLM_1849 c32b6a8a98844c210d4e7b098ea29f15 205 Gene3D G3DSA:3.30.420.10 2 178 2.6E-44 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DLM_2494 fa0d50368987c467b4fbb45cbc56e093 506 Pfam PF00324 Amino acid permease 18 471 3.1E-137 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DLM_2494 fa0d50368987c467b4fbb45cbc56e093 506 Gene3D G3DSA:1.20.1740.10 10 485 3.8E-58 T 23-10-2018 DLM_2494 fa0d50368987c467b4fbb45cbc56e093 506 PIRSF PIRSF006060 1 494 2.5E-76 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_2494 fa0d50368987c467b4fbb45cbc56e093 506 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DLM_2469 0ddbc2943917b609f35397677d2753ce 259 SMART SM00530 13 85 6.6E-8 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DLM_2469 0ddbc2943917b609f35397677d2753ce 259 Pfam PF13560 Helix-turn-helix domain 10 88 1.4E-16 T 23-10-2018 DLM_2469 0ddbc2943917b609f35397677d2753ce 259 Gene3D G3DSA:1.10.260.40 25 104 2.3E-9 T 23-10-2018 DLM_2469 0ddbc2943917b609f35397677d2753ce 259 Gene3D G3DSA:3.30.450.180 106 259 1.5E-16 T 23-10-2018 DLM_2469 0ddbc2943917b609f35397677d2753ce 259 SUPERFAMILY SSF47413 32 80 1.8E-9 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_4137 4110043d9e8c282eee1020439551eb2f 298 PRINTS PR00069 Aldo-keto reductase signature 146 163 5.0E-9 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_4137 4110043d9e8c282eee1020439551eb2f 298 PRINTS PR00069 Aldo-keto reductase signature 225 249 5.0E-9 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_4137 4110043d9e8c282eee1020439551eb2f 298 PRINTS PR00069 Aldo-keto reductase signature 115 133 5.0E-9 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DLM_4137 4110043d9e8c282eee1020439551eb2f 298 Pfam PF00248 Aldo/keto reductase family 19 288 7.4E-59 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain DLM_4137 4110043d9e8c282eee1020439551eb2f 298 SUPERFAMILY SSF51430 7 293 2.36E-77 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_4137 4110043d9e8c282eee1020439551eb2f 298 Gene3D G3DSA:3.20.20.100 4 298 4.1E-97 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DLM_2045 4953575c45dfc4ac0e46049451dc0c7e 614 Pfam PF07519 Tannase and feruloyl esterase 88 575 1.1E-116 T 23-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 DLM_2045 4953575c45dfc4ac0e46049451dc0c7e 614 SUPERFAMILY SSF53474 182 486 2.09E-12 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3038 cf727a14fe56a41ba3b1a1fe18e9d965 109 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 108 1.8E-41 T 23-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 DLM_3038 cf727a14fe56a41ba3b1a1fe18e9d965 109 SUPERFAMILY SSF103481 10 107 9.42E-7 T 23-10-2018 DLM_3038 cf727a14fe56a41ba3b1a1fe18e9d965 109 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 24.984 T 23-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 DLM_1560 47c39a9b199bf0bc1bf5a3da22a94a5f 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 353 4.6E-86 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_1560 47c39a9b199bf0bc1bf5a3da22a94a5f 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DLM_1560 47c39a9b199bf0bc1bf5a3da22a94a5f 361 Gene3D G3DSA:3.40.718.10 1 360 1.6E-146 T 23-10-2018 DLM_1560 47c39a9b199bf0bc1bf5a3da22a94a5f 361 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 357 2.0E-168 T 23-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 DLM_1560 47c39a9b199bf0bc1bf5a3da22a94a5f 361 SMART SM01329 4 353 1.2E-180 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DLM_1560 47c39a9b199bf0bc1bf5a3da22a94a5f 361 SUPERFAMILY SSF53659 1 357 4.03E-117 T 23-10-2018 DLM_2689 c4075ed62a18c25fcea799f0c332b9b3 166 Pfam PF08822 Protein of unknown function (DUF1804) 1 163 6.3E-67 T 23-10-2018 IPR014926 Bacteriophage D3112, Orf24 DLM_1028 617c8ec7174b01b385bbbcc275bf9680 313 Pfam PF00795 Carbon-nitrogen hydrolase 5 236 1.4E-29 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DLM_1028 617c8ec7174b01b385bbbcc275bf9680 313 Gene3D G3DSA:3.60.110.10 3 266 1.9E-61 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_1028 617c8ec7174b01b385bbbcc275bf9680 313 SUPERFAMILY SSF56317 4 240 4.06E-54 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DLM_1028 617c8ec7174b01b385bbbcc275bf9680 313 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 138 158 - T 23-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DLM_3767 e9f67d8f5a75cf71a1ce07687af6efd4 314 SUPERFAMILY SSF53590 3 307 6.41E-103 T 23-10-2018 IPR036452 Ribonucleoside hydrolase-like DLM_3767 e9f67d8f5a75cf71a1ce07687af6efd4 314 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 300 1.8E-93 T 23-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DLM_3767 e9f67d8f5a75cf71a1ce07687af6efd4 314 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 23-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 DLM_3767 e9f67d8f5a75cf71a1ce07687af6efd4 314 Gene3D G3DSA:3.90.245.10 1 313 1.2E-123 T 23-10-2018 IPR036452 Ribonucleoside hydrolase-like DLM_3597 4417da3db22298821feb5d556f0809d6 229 Pfam PF13681 Type IV pilus assembly protein PilX C-term 114 207 4.4E-7 T 23-10-2018 IPR025205 PilX/PilW C-terminal domain DLM_4274 218521b867f4188ccf3d6f2a3421a59a 321 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 256 319 9.9E-8 T 23-10-2018 IPR006260 TonB/TolA, C-terminal DLM_4274 218521b867f4188ccf3d6f2a3421a59a 321 SUPERFAMILY SSF74653 230 320 1.16E-12 T 23-10-2018 DLM_4274 218521b867f4188ccf3d6f2a3421a59a 321 Pfam PF13103 TonB C terminal 232 305 3.5E-18 T 23-10-2018 DLM_4274 218521b867f4188ccf3d6f2a3421a59a 321 Gene3D G3DSA:3.30.1150.10 202 321 3.4E-21 T 23-10-2018 DLM_1521 941d9f52abc2659c298b8dadd7a9eef0 269 Gene3D G3DSA:3.40.190.10 107 213 9.6E-72 T 23-10-2018 DLM_1521 941d9f52abc2659c298b8dadd7a9eef0 269 Gene3D G3DSA:3.40.190.10 27 245 9.6E-72 T 23-10-2018 DLM_1521 941d9f52abc2659c298b8dadd7a9eef0 269 Pfam PF03180 NLPA lipoprotein 27 258 4.3E-71 T 23-10-2018 IPR004872 Lipoprotein NlpA family DLM_1521 941d9f52abc2659c298b8dadd7a9eef0 269 SUPERFAMILY SSF53850 27 260 1.68E-64 T 23-10-2018 DLM_0039 c4ac8d21e78a236bb08e6879a891bda8 278 Gene3D G3DSA:3.10.310.10 114 265 2.4E-66 T 23-10-2018 DLM_0039 c4ac8d21e78a236bb08e6879a891bda8 278 Gene3D G3DSA:3.10.310.10 8 267 2.4E-66 T 23-10-2018 DLM_0039 c4ac8d21e78a236bb08e6879a891bda8 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 274 1.4E-46 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DLM_0039 c4ac8d21e78a236bb08e6879a891bda8 278 SUPERFAMILY SSF54506 4 277 3.31E-61 T 23-10-2018 DLM_0039 c4ac8d21e78a236bb08e6879a891bda8 278 Pfam PF02567 Phenazine biosynthesis-like protein 9 271 1.1E-48 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DLM_0039 c4ac8d21e78a236bb08e6879a891bda8 278 PIRSF PIRSF016184 1 278 2.6E-64 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DLM_4000 d7d820a2dc6f5210908aba3ca9c9d0f0 477 Gene3D G3DSA:3.30.9.10 97 334 8.4E-45 T 23-10-2018 DLM_4000 d7d820a2dc6f5210908aba3ca9c9d0f0 477 Pfam PF01266 FAD dependent oxidoreductase 4 371 2.2E-35 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DLM_4000 d7d820a2dc6f5210908aba3ca9c9d0f0 477 SUPERFAMILY SSF51905 3 395 1.42E-25 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_4000 d7d820a2dc6f5210908aba3ca9c9d0f0 477 Gene3D G3DSA:3.50.50.60 4 372 8.4E-45 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DLM_3174 0d4bd2b2bfdc5accc4626561925ac700 426 TIGRFAM TIGR00896 CynX: cyanate transporter 43 392 1.5E-125 T 23-10-2018 IPR004747 Cyanate transport system protein GO:0016021 DLM_3174 0d4bd2b2bfdc5accc4626561925ac700 426 Pfam PF07690 Major Facilitator Superfamily 58 373 2.0E-20 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_3174 0d4bd2b2bfdc5accc4626561925ac700 426 Gene3D G3DSA:1.20.1250.20 226 415 1.8E-19 T 23-10-2018 DLM_3174 0d4bd2b2bfdc5accc4626561925ac700 426 Gene3D G3DSA:1.20.1250.20 36 225 1.0E-12 T 23-10-2018 DLM_3174 0d4bd2b2bfdc5accc4626561925ac700 426 SUPERFAMILY SSF103473 25 417 3.79E-50 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_4535 267290b79e851a82d178340657e5ff57 180 Gene3D G3DSA:3.40.50.2020 4 180 1.8E-47 T 23-10-2018 DLM_4535 267290b79e851a82d178340657e5ff57 180 Pfam PF00156 Phosphoribosyl transferase domain 14 161 4.2E-17 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DLM_4535 267290b79e851a82d178340657e5ff57 180 SUPERFAMILY SSF53271 14 180 3.67E-45 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like DLM_3895 520cd60447ff97c7cf5a429e0a036505 420 Pfam PF03594 Benzoate membrane transport protein 26 398 2.9E-125 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 DLM_3895 520cd60447ff97c7cf5a429e0a036505 420 TIGRFAM TIGR00843 benE: benzoate transporter 25 397 5.9E-108 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 DLM_1856 249c1a8037cdfb181ece5a57e937492d 473 Gene3D G3DSA:1.20.1600.10 57 469 5.2E-118 T 23-10-2018 DLM_1856 249c1a8037cdfb181ece5a57e937492d 473 SUPERFAMILY SSF56954 3 471 9.16E-99 T 23-10-2018 DLM_1856 249c1a8037cdfb181ece5a57e937492d 473 Pfam PF02321 Outer membrane efflux protein 66 258 5.8E-24 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1856 249c1a8037cdfb181ece5a57e937492d 473 Pfam PF02321 Outer membrane efflux protein 287 467 3.0E-27 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1856 249c1a8037cdfb181ece5a57e937492d 473 Gene3D G3DSA:2.20.200.10 102 354 5.2E-118 T 23-10-2018 DLM_1856 249c1a8037cdfb181ece5a57e937492d 473 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 469 4.9E-129 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_3785 007bd30f7548124c142e55c81c63edc3 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 3.2E-47 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DLM_3785 007bd30f7548124c142e55c81c63edc3 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.1E-52 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DLM_3785 007bd30f7548124c142e55c81c63edc3 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.831 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DLM_3785 007bd30f7548124c142e55c81c63edc3 156 PIRSF PIRSF004505 1 155 3.6E-46 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DLM_3785 007bd30f7548124c142e55c81c63edc3 156 Gene3D G3DSA:3.40.1280.10 1 156 6.3E-54 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DLM_3785 007bd30f7548124c142e55c81c63edc3 156 SUPERFAMILY SSF75217 1 154 2.8E-52 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases DLM_3673 eb6f0178d6e20c9d213132c1d043b809 233 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 23-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site DLM_3673 eb6f0178d6e20c9d213132c1d043b809 233 Gene3D G3DSA:3.30.2310.10 146 226 1.4E-18 T 23-10-2018 DLM_3673 eb6f0178d6e20c9d213132c1d043b809 233 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 3.4E-48 T 23-10-2018 IPR023370 YaeB-like, N-terminal domain DLM_3673 eb6f0178d6e20c9d213132c1d043b809 233 SUPERFAMILY SSF118196 1 225 2.48E-80 T 23-10-2018 IPR036413 YaeB-like superfamily DLM_3673 eb6f0178d6e20c9d213132c1d043b809 233 Gene3D G3DSA:2.40.30.70 24 145 2.2E-48 T 23-10-2018 IPR036414 YaeB, N-terminal domain superfamily DLM_3673 eb6f0178d6e20c9d213132c1d043b809 233 Pfam PF01980 Uncharacterised protein family UPF0066 19 140 4.4E-41 T 23-10-2018 IPR023370 YaeB-like, N-terminal domain DLM_4366 02ab9737832cca0c06f37476049eccf3 217 SMART SM00382 27 214 5.5E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain DLM_4366 02ab9737832cca0c06f37476049eccf3 217 Pfam PF00005 ABC transporter 18 166 1.5E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DLM_4366 02ab9737832cca0c06f37476049eccf3 217 Gene3D G3DSA:3.40.50.300 1 217 1.6E-63 T 23-10-2018 DLM_4366 02ab9737832cca0c06f37476049eccf3 217 SUPERFAMILY SSF52540 1 215 1.46E-61 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4366 02ab9737832cca0c06f37476049eccf3 217 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DLM_4366 02ab9737832cca0c06f37476049eccf3 217 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 8.3E-83 T 23-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 DLM_2928 ee690f637826e3cabe24d5f7e31b36e1 292 Pfam PF00753 Metallo-beta-lactamase superfamily 41 103 5.9E-5 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_2928 ee690f637826e3cabe24d5f7e31b36e1 292 SMART SM00849 41 227 2.1E-7 T 23-10-2018 IPR001279 Metallo-beta-lactamase DLM_2928 ee690f637826e3cabe24d5f7e31b36e1 292 Gene3D G3DSA:3.60.15.10 24 262 2.8E-21 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_2928 ee690f637826e3cabe24d5f7e31b36e1 292 SUPERFAMILY SSF56281 34 251 1.22E-33 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DLM_3677 a14891e88182bbe2e2fd575d8d29d97e 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 36.69 T 23-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DLM_3677 a14891e88182bbe2e2fd575d8d29d97e 196 Pfam PF13580 SIS domain 10 146 1.4E-35 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DLM_3677 a14891e88182bbe2e2fd575d8d29d97e 196 Gene3D G3DSA:3.40.50.10490 1 195 2.8E-75 T 23-10-2018 DLM_3677 a14891e88182bbe2e2fd575d8d29d97e 196 SUPERFAMILY SSF53697 3 191 2.4E-56 T 23-10-2018 DLM_1592 a82904549bd5067953b01e269dc46716 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 447 1.3E-138 T 23-10-2018 IPR010263 Type VI secretion protein, VC_A0114 DLM_1592 a82904549bd5067953b01e269dc46716 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 3.3E-131 T 23-10-2018 IPR010263 Type VI secretion protein, VC_A0114 DLM_4086 eb5375557130b399cbd334ca16694684 282 Gene3D G3DSA:3.40.50.1820 64 274 2.3E-18 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4086 eb5375557130b399cbd334ca16694684 282 SUPERFAMILY SSF53474 117 277 1.1E-21 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4413 80e253027a62eab4ba1b56a5fe65dac4 120 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4413 80e253027a62eab4ba1b56a5fe65dac4 120 PIRSF PIRSF002134 1 120 2.9E-44 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4413 80e253027a62eab4ba1b56a5fe65dac4 120 SUPERFAMILY SSF46946 2 120 4.84E-45 T 23-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DLM_4413 80e253027a62eab4ba1b56a5fe65dac4 120 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.4E-52 T 23-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DLM_4413 80e253027a62eab4ba1b56a5fe65dac4 120 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.976 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4413 80e253027a62eab4ba1b56a5fe65dac4 120 Pfam PF00416 Ribosomal protein S13/S18 3 108 9.6E-30 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4413 80e253027a62eab4ba1b56a5fe65dac4 120 Gene3D G3DSA:4.10.910.10 72 117 3.7E-26 T 23-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4413 80e253027a62eab4ba1b56a5fe65dac4 120 Gene3D G3DSA:1.10.8.50 1 71 1.8E-27 T 23-10-2018 DLM_2372 42ef65dcbb0e36681a91b7124a402327 607 Gene3D G3DSA:1.10.287.950 95 427 4.7E-64 T 23-10-2018 DLM_2372 42ef65dcbb0e36681a91b7124a402327 607 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 71 91 5.7E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2372 42ef65dcbb0e36681a91b7124a402327 607 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 262 289 5.7E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2372 42ef65dcbb0e36681a91b7124a402327 607 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 5.7E-19 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DLM_2372 42ef65dcbb0e36681a91b7124a402327 607 SMART SM00283 164 425 4.9E-51 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2372 42ef65dcbb0e36681a91b7124a402327 607 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 237 390 4.0E-37 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_2372 42ef65dcbb0e36681a91b7124a402327 607 SMART SM00304 95 149 9.2E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_2372 42ef65dcbb0e36681a91b7124a402327 607 SUPERFAMILY SSF58104 117 426 1.44E-64 T 23-10-2018 DLM_4395 094f78c0c606c3c89c2437206e426450 92 Pfam PF00203 Ribosomal protein S19 3 83 3.6E-36 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4395 094f78c0c606c3c89c2437206e426450 92 SUPERFAMILY SSF54570 3 84 1.83E-34 T 23-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4395 094f78c0c606c3c89c2437206e426450 92 PIRSF PIRSF002144 1 92 2.9E-33 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4395 094f78c0c606c3c89c2437206e426450 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.0E-44 T 23-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DLM_4395 094f78c0c606c3c89c2437206e426450 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4395 094f78c0c606c3c89c2437206e426450 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.297 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4395 094f78c0c606c3c89c2437206e426450 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.8E-23 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4395 094f78c0c606c3c89c2437206e426450 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.8E-23 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4395 094f78c0c606c3c89c2437206e426450 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.8E-23 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_4395 094f78c0c606c3c89c2437206e426450 92 Gene3D G3DSA:3.30.860.10 1 92 4.5E-41 T 23-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DLM_2534 1f990c0ae0e526f0aa85080f783803e5 256 Pfam PF13460 NAD(P)H-binding 21 157 9.6E-10 T 23-10-2018 IPR016040 NAD(P)-binding domain DLM_2534 1f990c0ae0e526f0aa85080f783803e5 256 Gene3D G3DSA:3.40.50.720 4 166 4.2E-32 T 23-10-2018 DLM_2534 1f990c0ae0e526f0aa85080f783803e5 256 SUPERFAMILY SSF51735 12 241 4.0E-33 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_1642 d2d8be543a2075a0ed2726f3e0bbd80a 151 Gene3D G3DSA:3.40.630.30 3 141 4.6E-33 T 23-10-2018 DLM_1642 d2d8be543a2075a0ed2726f3e0bbd80a 151 SUPERFAMILY SSF55729 4 149 1.25E-34 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_1642 d2d8be543a2075a0ed2726f3e0bbd80a 151 Pfam PF00583 Acetyltransferase (GNAT) family 30 135 1.2E-19 T 23-10-2018 IPR000182 GNAT domain DLM_1291 689554881b50b4dabb811c69fdcfefc3 101 Gene3D G3DSA:1.10.260.40 6 78 4.6E-32 T 23-10-2018 DLM_1291 689554881b50b4dabb811c69fdcfefc3 101 Pfam PF13693 Winged helix-turn-helix DNA-binding 13 81 2.6E-31 T 23-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain DLM_1291 689554881b50b4dabb811c69fdcfefc3 101 SUPERFAMILY SSF47413 8 78 3.43E-28 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_2545 466a4f88a84cea7ee75fc95440a191a8 370 Pfam PF01594 AI-2E family transporter 15 346 1.5E-34 T 23-10-2018 IPR002549 Transmembrane protein TqsA-like DLM_0330 8243197e81e1cf5372220a92d536cd18 233 Pfam PF13489 Methyltransferase domain 47 199 2.2E-27 T 23-10-2018 DLM_0330 8243197e81e1cf5372220a92d536cd18 233 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 2.1E-88 T 23-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DLM_0330 8243197e81e1cf5372220a92d536cd18 233 Gene3D G3DSA:3.40.50.150 8 231 7.3E-78 T 23-10-2018 DLM_0330 8243197e81e1cf5372220a92d536cd18 233 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 231 38.089 T 23-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DLM_0330 8243197e81e1cf5372220a92d536cd18 233 SUPERFAMILY SSF53335 10 227 1.84E-50 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3493 a9e0669460ef7f484c74b76e0a627db9 190 Pfam PF11745 Protein of unknown function (DUF3304) 74 160 2.7E-20 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_0952 81380c8386fc7bd07a0b10fa1332dcca 220 Pfam PF02169 LPP20 lipoprotein 88 168 6.3E-14 T 23-10-2018 IPR024952 Lipoprotein LPP20-like DLM_2484 3cfc0bd2eb6c524d6cc17bcca7362d34 559 Pfam PF02470 MlaD protein 184 259 8.4E-10 T 23-10-2018 IPR003399 Mce/MlaD DLM_2484 3cfc0bd2eb6c524d6cc17bcca7362d34 559 Pfam PF02470 MlaD protein 69 160 5.9E-12 T 23-10-2018 IPR003399 Mce/MlaD DLM_2484 3cfc0bd2eb6c524d6cc17bcca7362d34 559 Pfam PF02470 MlaD protein 315 414 1.3E-15 T 23-10-2018 IPR003399 Mce/MlaD DLM_2504 ee9c83aff935f172233818134b178f87 416 TIGRFAM TIGR01814 kynureninase: kynureninase 8 400 5.0E-107 T 23-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DLM_2504 ee9c83aff935f172233818134b178f87 416 PIRSF PIRSF038800 1 407 7.9E-147 T 23-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DLM_2504 ee9c83aff935f172233818134b178f87 416 Pfam PF00266 Aminotransferase class-V 78 346 1.1E-14 T 23-10-2018 IPR000192 Aminotransferase class V domain DLM_2504 ee9c83aff935f172233818134b178f87 416 SUPERFAMILY SSF53383 3 401 3.2E-87 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DLM_2504 ee9c83aff935f172233818134b178f87 416 Gene3D G3DSA:3.40.640.10 41 303 8.1E-163 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DLM_2504 ee9c83aff935f172233818134b178f87 416 Hamap MF_01970 Kynureninase [kynU]. 1 399 34.349 T 23-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DLM_2504 ee9c83aff935f172233818134b178f87 416 Gene3D G3DSA:3.90.1150.10 11 399 8.1E-163 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DLM_3341 c25de197701a73299b397ef965902f6a 201 Pfam PF01914 MarC family integral membrane protein 4 195 1.8E-51 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_3341 c25de197701a73299b397ef965902f6a 201 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 193 3.7E-32 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DLM_2184 3f708f1bb8496abdeba14956e22ec54d 218 Pfam PF13545 Crp-like helix-turn-helix domain 129 195 8.3E-14 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_2184 3f708f1bb8496abdeba14956e22ec54d 218 SUPERFAMILY SSF51206 5 119 7.07E-12 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like DLM_2184 3f708f1bb8496abdeba14956e22ec54d 218 SMART SM00419 141 189 3.5E-4 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DLM_2184 3f708f1bb8496abdeba14956e22ec54d 218 Gene3D G3DSA:1.10.10.10 123 196 2.6E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_2184 3f708f1bb8496abdeba14956e22ec54d 218 SUPERFAMILY SSF46785 126 201 2.53E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_2604 c1223cbe77880cf547204224f9d1764f 310 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 307 1.7E-97 T 23-10-2018 IPR007296 Domain of unknown function DUF403 DLM_1570 a91c7aa0c8f43096f36080ff64128852 125 Pfam PF11578 Protein of unknown function (DUF3237) 3 124 1.7E-22 T 23-10-2018 IPR020915 Uncharacterised protein family UPF0311 DLM_1570 a91c7aa0c8f43096f36080ff64128852 125 Gene3D G3DSA:2.40.160.20 1 125 1.8E-32 T 23-10-2018 DLM_1198 2b1168999b19c307a2a2bca3c8b71194 434 SUPERFAMILY SSF52540 32 339 9.52E-7 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1198 2b1168999b19c307a2a2bca3c8b71194 434 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 5 406 4.8E-162 T 23-10-2018 IPR021228 Protein of unknown function DUF2791 DLM_3514 2f2bf32e733cb97f0aa305e364d62b67 412 SMART SM00990 81 200 1.7E-12 T 23-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 DLM_3514 2f2bf32e733cb97f0aa305e364d62b67 412 Pfam PF08774 VRR-NUC domain 82 198 3.2E-10 T 23-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 DLM_1246 33b0594bfb0b2963e28605e7b4d6e14c 191 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 86 190 8.0E-18 T 23-10-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DLM_0086 cdcdcd508188b3b400063e915ccbb5ea 65 Gene3D G3DSA:3.30.50.10 1 63 3.7E-24 T 23-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 DLM_0086 cdcdcd508188b3b400063e915ccbb5ea 65 SUPERFAMILY SSF57716 5 61 4.13E-21 T 23-10-2018 DLM_0086 cdcdcd508188b3b400063e915ccbb5ea 65 Pfam PF03884 DNA gyrase inhibitor YacG 8 57 2.3E-25 T 23-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DLM_0086 cdcdcd508188b3b400063e915ccbb5ea 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 63 18.32 T 23-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.4E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.4E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.4E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.4E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 SUPERFAMILY SSF50129 1 95 1.29E-34 T 23-10-2018 IPR011032 GroES-like superfamily DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 SMART SM00883 2 94 2.7E-57 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.054 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 5.8E-34 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DLM_3370 cdb8ad87d46a355f218d38e84f55328f 95 Gene3D G3DSA:2.30.33.40 1 95 1.5E-37 T 23-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 DLM_1124 f7b49fd14dce076cee08b5ca82336e59 135 Gene3D G3DSA:2.60.120.10 21 134 4.8E-18 T 23-10-2018 IPR014710 RmlC-like jelly roll fold DLM_1124 f7b49fd14dce076cee08b5ca82336e59 135 SUPERFAMILY SSF51182 1 134 1.76E-24 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily DLM_1124 f7b49fd14dce076cee08b5ca82336e59 135 Pfam PF07883 Cupin domain 61 128 6.1E-18 T 23-10-2018 IPR013096 Cupin 2, conserved barrel DLM_2204 4603b7a8bead82bbc14ac200114dda5b 358 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 18 345 1.7E-114 T 23-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 DLM_2204 4603b7a8bead82bbc14ac200114dda5b 358 Gene3D G3DSA:1.20.1530.20 16 347 6.5E-17 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily DLM_2204 4603b7a8bead82bbc14ac200114dda5b 358 PIRSF PIRSF005508 3 357 2.0E-114 T 23-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 DLM_2204 4603b7a8bead82bbc14ac200114dda5b 358 Pfam PF01758 Sodium Bile acid symporter family 64 257 5.7E-34 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DLM_4471 8918fd5f6078e54f461fe297c0504bc6 351 SUPERFAMILY SSF53686 21 335 1.57E-68 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DLM_4471 8918fd5f6078e54f461fe297c0504bc6 351 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 312 1.8E-41 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DLM_4471 8918fd5f6078e54f461fe297c0504bc6 351 Gene3D G3DSA:3.40.50.1100 48 154 9.6E-66 T 23-10-2018 DLM_4471 8918fd5f6078e54f461fe297c0504bc6 351 Gene3D G3DSA:3.40.50.1100 22 320 9.6E-66 T 23-10-2018 DLM_3639 a48957678b9383a423a1bf822977d4fd 131 Gene3D G3DSA:3.30.870.10 3 90 4.0E-9 T 23-10-2018 DLM_3639 a48957678b9383a423a1bf822977d4fd 131 SUPERFAMILY SSF56024 24 81 5.38E-10 T 23-10-2018 DLM_3639 a48957678b9383a423a1bf822977d4fd 131 Pfam PF13091 PLD-like domain 26 74 9.9E-8 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DLM_0412 d2ef6451bb81adb36d690632719a4ba4 899 Gene3D G3DSA:3.20.20.140 427 593 1.3E-14 T 23-10-2018 DLM_0412 d2ef6451bb81adb36d690632719a4ba4 899 Gene3D G3DSA:3.20.20.140 753 892 1.6E-15 T 23-10-2018 DLM_0412 d2ef6451bb81adb36d690632719a4ba4 899 SUPERFAMILY SSF51556 489 863 9.07E-11 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_2048 d22c42982cdf89ba8ed32bd4e6c2be47 227 SUPERFAMILY SSF89562 25 185 1.7E-49 T 23-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DLM_2048 d22c42982cdf89ba8ed32bd4e6c2be47 227 Pfam PF03737 Aldolase/RraA 28 174 1.2E-39 T 23-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DLM_2048 d22c42982cdf89ba8ed32bd4e6c2be47 227 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 5 226 7.7E-127 T 23-10-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 DLM_2048 d22c42982cdf89ba8ed32bd4e6c2be47 227 Gene3D G3DSA:3.50.30.40 26 176 1.0E-52 T 23-10-2018 DLM_2800 7e3922ae7b6eeaa41a8d2aa401b50aaa 392 Gene3D G3DSA:3.40.1090.10 11 121 8.8E-16 T 23-10-2018 DLM_2800 7e3922ae7b6eeaa41a8d2aa401b50aaa 392 Gene3D G3DSA:3.40.1090.10 132 298 2.2E-17 T 23-10-2018 DLM_2800 7e3922ae7b6eeaa41a8d2aa401b50aaa 392 Pfam PF01734 Patatin-like phospholipase 28 240 4.7E-20 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DLM_2800 7e3922ae7b6eeaa41a8d2aa401b50aaa 392 Pfam PF12536 Patatin phospholipase 277 381 5.1E-35 T 23-10-2018 IPR021095 Protein of unknown function DUF3734 DLM_2800 7e3922ae7b6eeaa41a8d2aa401b50aaa 392 SUPERFAMILY SSF52151 25 371 1.17E-54 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DLM_4424 1d4e051ea994b4c221c39a2aef22e887 320 Gene3D G3DSA:3.40.50.300 102 307 1.6E-73 T 23-10-2018 DLM_4424 1d4e051ea994b4c221c39a2aef22e887 320 Pfam PF02562 PhoH-like protein 105 307 3.5E-95 T 23-10-2018 IPR003714 PhoH-like protein GO:0005524 DLM_4424 1d4e051ea994b4c221c39a2aef22e887 320 SUPERFAMILY SSF52540 68 282 3.26E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_4270 8e4197bca96f362a83af4b37d6edb811 72 SUPERFAMILY SSF55073 6 66 1.65E-11 T 23-10-2018 IPR029787 Nucleotide cyclase DLM_4270 8e4197bca96f362a83af4b37d6edb811 72 Pfam PF00990 Diguanylate cyclase, GGDEF domain 4 65 3.5E-8 T 23-10-2018 IPR000160 GGDEF domain DLM_4270 8e4197bca96f362a83af4b37d6edb811 72 Gene3D G3DSA:3.30.70.270 1 68 1.1E-13 T 23-10-2018 DLM_0063 855a5dac4a2b1d4111d5b79ed6fd5045 98 Pfam PF10993 Protein of unknown function (DUF2818) 4 94 2.5E-31 T 23-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane DLM_0063 855a5dac4a2b1d4111d5b79ed6fd5045 98 PIRSF PIRSF019883 1 98 8.5E-37 T 23-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 SUPERFAMILY SSF46785 2 83 1.19E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 Gene3D G3DSA:1.10.10.10 1 87 4.4E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.2E-14 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 Pfam PF03466 LysR substrate binding domain 94 298 5.9E-19 T 23-10-2018 IPR005119 LysR, substrate-binding DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 Gene3D G3DSA:3.40.190.10 170 269 5.2E-53 T 23-10-2018 DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 SUPERFAMILY SSF53850 90 296 3.08E-36 T 23-10-2018 DLM_1309 0e5d34749cb0db4f677614f6cbba9134 306 Gene3D G3DSA:3.40.190.10 90 294 5.2E-53 T 23-10-2018 DLM_2812 5e1901023e3c1d7593b5740fb1471e71 137 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 4 91 1.8E-10 T 23-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DLM_2812 5e1901023e3c1d7593b5740fb1471e71 137 Gene3D G3DSA:1.10.3420.10 1 130 7.6E-24 T 23-10-2018 IPR023292 NTP pyrophosphohydrolase-like domain superfamily DLM_0009 969d4f3049a85e3a07993889180e654a 113 Pfam PF01312 FlhB HrpN YscU SpaS Family 13 85 3.0E-18 T 23-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DLM_0009 969d4f3049a85e3a07993889180e654a 113 SUPERFAMILY SSF160544 12 89 2.75E-22 T 23-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DLM_0009 969d4f3049a85e3a07993889180e654a 113 Gene3D G3DSA:3.40.1690.10 11 91 3.8E-24 T 23-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DLM_4480 49385d86f4b69d97f1001b229a3923f8 82 Pfam PF01722 BolA-like protein 22 76 3.4E-15 T 23-10-2018 IPR002634 BolA protein DLM_4480 49385d86f4b69d97f1001b229a3923f8 82 Gene3D G3DSA:3.30.300.90 1 79 1.2E-25 T 23-10-2018 DLM_4480 49385d86f4b69d97f1001b229a3923f8 82 SUPERFAMILY SSF82657 1 81 4.97E-25 T 23-10-2018 IPR036065 BolA-like superfamily DLM_4480 49385d86f4b69d97f1001b229a3923f8 82 PIRSF PIRSF003113 1 81 2.4E-18 T 23-10-2018 IPR002634 BolA protein DLM_3117 0c8ea730fe67a80722c78b8ad7c0d182 441 Pfam PF03573 outer membrane porin, OprD family 41 285 2.5E-11 T 23-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 DLM_3117 0c8ea730fe67a80722c78b8ad7c0d182 441 Gene3D G3DSA:2.40.160.10 45 330 6.0E-18 T 23-10-2018 IPR023614 Porin domain superfamily DLM_0771 7b6d11f220180702cf301152eab7bcf3 227 Pfam PF10979 Protein of unknown function (DUF2786) 6 42 5.9E-15 T 23-10-2018 IPR024498 Domain of unknown function DUF2786 DLM_0771 7b6d11f220180702cf301152eab7bcf3 227 PIRSF PIRSF028111 1 224 1.7E-65 T 23-10-2018 IPR016868 Bacteriophage B3, Orf5 DLM_2829 3fee32fc772830631f48efe96b257da5 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 4.3E-54 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DLM_2829 3fee32fc772830631f48efe96b257da5 168 PIRSF PIRSF028301 1 167 5.5E-54 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DLM_2829 3fee32fc772830631f48efe96b257da5 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 4.1E-53 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DLM_0729 531311fb83ea41f7c976399d6c6594d4 119 Pfam PF00355 Rieske [2Fe-2S] domain 39 98 9.4E-8 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DLM_0729 531311fb83ea41f7c976399d6c6594d4 119 SUPERFAMILY SSF50022 9 114 7.33E-19 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_0729 531311fb83ea41f7c976399d6c6594d4 119 Gene3D G3DSA:2.102.10.10 8 119 5.0E-10 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DLM_3238 a5d907aa791fd63ec92563dfe5a54183 76 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 66 1.4E-21 T 23-10-2018 IPR021074 Formate dehydrogenase, delta subunit DLM_1382 41a5d1a066a2c69aadbc640849bd7fca 87 SUPERFAMILY SSF52540 1 64 2.67E-11 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_1382 41a5d1a066a2c69aadbc640849bd7fca 87 Gene3D G3DSA:3.40.50.300 1 78 5.0E-11 T 23-10-2018 DLM_0160 583b840337f31c9a3a18bb57c946760d 148 Pfam PF08239 Bacterial SH3 domain 32 81 4.1E-7 T 23-10-2018 IPR003646 SH3-like domain, bacterial-type DLM_0160 583b840337f31c9a3a18bb57c946760d 148 Gene3D G3DSA:2.30.30.40 86 143 1.1E-6 T 23-10-2018 DLM_0160 583b840337f31c9a3a18bb57c946760d 148 Gene3D G3DSA:2.30.30.40 20 85 6.0E-6 T 23-10-2018 DLM_0160 583b840337f31c9a3a18bb57c946760d 148 Pfam PF06347 Bacterial SH3 domain 92 147 5.2E-9 T 23-10-2018 IPR010466 Protein of unknown function DUF1058 DLM_0393 e88504fdfa692923c7d6cfa54d507298 339 Gene3D G3DSA:2.40.160.10 10 339 3.3E-42 T 23-10-2018 IPR023614 Porin domain superfamily DLM_0393 e88504fdfa692923c7d6cfa54d507298 339 Pfam PF13609 Gram-negative porin 7 319 2.0E-33 T 23-10-2018 DLM_0393 e88504fdfa692923c7d6cfa54d507298 339 SUPERFAMILY SSF56935 15 327 6.41E-35 T 23-10-2018 DLM_3058 4c765525934b869860525e9a71d267b5 305 Gene3D G3DSA:3.40.1010.20 3 275 1.3E-111 T 23-10-2018 DLM_3058 4c765525934b869860525e9a71d267b5 305 Gene3D G3DSA:3.40.50.11270 9 93 1.3E-111 T 23-10-2018 DLM_3058 4c765525934b869860525e9a71d267b5 305 Pfam PF02401 LytB protein 2 276 2.1E-92 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DLM_3058 4c765525934b869860525e9a71d267b5 305 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 280 36.076 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DLM_3058 4c765525934b869860525e9a71d267b5 305 Gene3D G3DSA:3.40.1010.20 94 190 1.3E-111 T 23-10-2018 DLM_3058 4c765525934b869860525e9a71d267b5 305 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 278 7.6E-98 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DLM_3648 8f31890b76b47851165df5042d30f4fc 242 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 1 222 2.5E-44 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DLM_3648 8f31890b76b47851165df5042d30f4fc 242 SUPERFAMILY SSF53686 1 237 1.19E-47 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DLM_3648 8f31890b76b47851165df5042d30f4fc 242 Gene3D G3DSA:3.40.50.1100 64 227 5.0E-76 T 23-10-2018 DLM_3648 8f31890b76b47851165df5042d30f4fc 242 Gene3D G3DSA:3.40.50.1100 1 63 5.0E-76 T 23-10-2018 DLM_3855 15fdb59fabceaf26cbafb6e99f748356 416 SUPERFAMILY SSF103473 20 411 4.32E-39 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_3855 15fdb59fabceaf26cbafb6e99f748356 416 Pfam PF05977 Transmembrane secretion effector 23 403 1.4E-33 T 23-10-2018 IPR010290 Transmembrane secretion effector DLM_3855 15fdb59fabceaf26cbafb6e99f748356 416 Gene3D G3DSA:1.20.1250.20 18 403 2.0E-34 T 23-10-2018 DLM_2733 d1d6b1f6e4c26728f4a8b18fa6986a19 459 Pfam PF07690 Major Facilitator Superfamily 35 415 1.6E-12 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_2733 d1d6b1f6e4c26728f4a8b18fa6986a19 459 TIGRFAM TIGR00886 2A0108: nitrite transporter 26 411 2.4E-101 T 23-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 DLM_2733 d1d6b1f6e4c26728f4a8b18fa6986a19 459 SUPERFAMILY SSF103473 7 451 4.32E-37 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_2733 d1d6b1f6e4c26728f4a8b18fa6986a19 459 Gene3D G3DSA:1.20.1250.20 1 230 9.1E-82 T 23-10-2018 DLM_2733 d1d6b1f6e4c26728f4a8b18fa6986a19 459 Gene3D G3DSA:1.20.1250.20 231 458 2.1E-74 T 23-10-2018 DLM_2579 cdabd1012cffb6a39847b632e4b1d289 659 Pfam PF01145 SPFH domain / Band 7 family 326 542 1.5E-18 T 23-10-2018 IPR001107 Band 7 domain DLM_0634 8c9181e733ad0e7a08bef602bfc79e43 349 SUPERFAMILY SSF161098 111 326 1.7E-13 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0634 8c9181e733ad0e7a08bef602bfc79e43 349 Gene3D G3DSA:1.10.3720.10 105 334 1.6E-19 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0634 8c9181e733ad0e7a08bef602bfc79e43 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 343 1.2E-34 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_3003 f75873f7763e190a3c19f6ef12f2eb5f 220 Gene3D G3DSA:3.30.2010.10 131 212 7.9E-17 T 23-10-2018 DLM_3003 f75873f7763e190a3c19f6ef12f2eb5f 220 Pfam PF01863 Protein of unknown function DUF45 11 211 6.4E-55 T 23-10-2018 IPR002725 Protein of unknown function DUF45 DLM_0146 fe225ba478eaefb23409772f6fa53010 99 Pfam PF04972 BON domain 33 97 1.4E-15 T 23-10-2018 IPR007055 BON domain DLM_3862 34382d42166337cea22158d026cf69f5 239 SUPERFAMILY SSF53850 6 234 8.58E-28 T 23-10-2018 DLM_3862 34382d42166337cea22158d026cf69f5 239 Gene3D G3DSA:3.40.190.10 17 234 9.6E-18 T 23-10-2018 DLM_3862 34382d42166337cea22158d026cf69f5 239 SMART SM00062 11 238 0.008 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_3862 34382d42166337cea22158d026cf69f5 239 Gene3D G3DSA:3.40.190.10 100 196 9.6E-18 T 23-10-2018 DLM_3862 34382d42166337cea22158d026cf69f5 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 12 234 5.9E-16 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2506 e8a16f9905ed45b3a6c3e85a65f46dce 210 Pfam PF01810 LysE type translocator 12 195 3.2E-17 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_0954 526f10bb3b5d5e67efc28c515c3a6e87 160 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 5.7E-19 T 23-10-2018 IPR000182 GNAT domain DLM_0954 526f10bb3b5d5e67efc28c515c3a6e87 160 SUPERFAMILY SSF55729 3 150 6.52E-38 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_0954 526f10bb3b5d5e67efc28c515c3a6e87 160 Gene3D G3DSA:3.40.630.30 1 158 7.0E-50 T 23-10-2018 DLM_3321 ca212eeaae46f46fa550b57249f4d4d7 208 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 191 6.4E-48 T 23-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DLM_3321 ca212eeaae46f46fa550b57249f4d4d7 208 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 200 19.587 T 23-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DLM_3321 ca212eeaae46f46fa550b57249f4d4d7 208 SMART SM01207 10 192 1.3E-81 T 23-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DLM_3321 ca212eeaae46f46fa550b57249f4d4d7 208 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 201 3.6E-55 T 23-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DLM_1036 5097309e9ebe74667fe048be1b1b2fd8 256 Pfam PF01925 Sulfite exporter TauE/SafE 6 254 3.6E-48 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DLM_2108 9fb5c966e3cb2e8728bda7659a526e39 192 PIRSF PIRSF028111 1 189 9.8E-45 T 23-10-2018 IPR016868 Bacteriophage B3, Orf5 DLM_4343 7f564979837a43870d7c99c8bd885b50 250 Gene3D G3DSA:1.20.1050.10 114 238 5.5E-11 T 23-10-2018 DLM_4343 7f564979837a43870d7c99c8bd885b50 250 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 73 9.9E-14 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_4343 7f564979837a43870d7c99c8bd885b50 250 SUPERFAMILY SSF47616 76 232 2.09E-13 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_4343 7f564979837a43870d7c99c8bd885b50 250 Pfam PF00043 Glutathione S-transferase, C-terminal domain 148 230 2.6E-7 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal DLM_4343 7f564979837a43870d7c99c8bd885b50 250 SUPERFAMILY SSF52833 1 101 5.61E-19 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_4343 7f564979837a43870d7c99c8bd885b50 250 Gene3D G3DSA:3.40.30.10 1 99 5.7E-15 T 23-10-2018 DLM_0336 a36dcfc98de00497c36e115d4a2992ff 1414 SUPERFAMILY SSF52540 920 1389 4.3E-38 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0336 a36dcfc98de00497c36e115d4a2992ff 1414 Gene3D G3DSA:3.40.50.300 1157 1391 1.5E-23 T 23-10-2018 DLM_0336 a36dcfc98de00497c36e115d4a2992ff 1414 Pfam PF13086 AAA domain 922 995 1.2E-14 T 23-10-2018 DLM_0336 a36dcfc98de00497c36e115d4a2992ff 1414 Pfam PF13087 AAA domain 1147 1361 2.9E-17 T 23-10-2018 DLM_0182 4a5419c5c0fd7ebf99f695e2d13e246a 140 SUPERFAMILY SSF64076 18 139 6.02E-40 T 23-10-2018 IPR036748 MTH938-like superfamily DLM_0182 4a5419c5c0fd7ebf99f695e2d13e246a 140 Gene3D G3DSA:3.40.1230.10 19 140 6.9E-38 T 23-10-2018 IPR036748 MTH938-like superfamily DLM_0182 4a5419c5c0fd7ebf99f695e2d13e246a 140 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 33 138 3.0E-33 T 23-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein DLM_2026 43b1db8e6244edff12f9eb42db3946ff 144 SUPERFAMILY SSF55729 2 134 1.77E-32 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_2026 43b1db8e6244edff12f9eb42db3946ff 144 Gene3D G3DSA:3.40.630.30 3 137 1.6E-41 T 23-10-2018 DLM_2026 43b1db8e6244edff12f9eb42db3946ff 144 Pfam PF00583 Acetyltransferase (GNAT) family 35 125 3.2E-16 T 23-10-2018 IPR000182 GNAT domain DLM_3900 078dfb01a3ece38c70541d59c477347b 182 PIRSF PIRSF000239 21 181 6.2E-20 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_3900 078dfb01a3ece38c70541d59c477347b 182 SUPERFAMILY SSF52833 26 177 1.71E-35 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_3900 078dfb01a3ece38c70541d59c477347b 182 Gene3D G3DSA:3.40.30.10 19 177 1.1E-32 T 23-10-2018 DLM_3900 078dfb01a3ece38c70541d59c477347b 182 Pfam PF00578 AhpC/TSA family 29 156 9.3E-25 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DLM_0248 2ad1ce425c1d48deaef6b48363cc39e2 318 SUPERFAMILY SSF103481 49 145 3.14E-11 T 23-10-2018 DLM_0248 2ad1ce425c1d48deaef6b48363cc39e2 318 Pfam PF00892 EamA-like transporter family 6 142 1.4E-16 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_0248 2ad1ce425c1d48deaef6b48363cc39e2 318 Pfam PF00892 EamA-like transporter family 157 286 3.4E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_0248 2ad1ce425c1d48deaef6b48363cc39e2 318 SUPERFAMILY SSF103481 190 289 5.36E-9 T 23-10-2018 DLM_0957 2b60fd0518b8d854020c0a31679e470d 326 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 6 315 8.3E-99 T 23-10-2018 IPR016833 Putative sodium bile acid cotransporter DLM_0957 2b60fd0518b8d854020c0a31679e470d 326 Gene3D G3DSA:1.20.1530.20 2 317 1.6E-35 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily DLM_0957 2b60fd0518b8d854020c0a31679e470d 326 PIRSF PIRSF026166 1 326 1.6E-133 T 23-10-2018 IPR016833 Putative sodium bile acid cotransporter DLM_2065 c06ded43c151f8c36ac187bcbff11525 114 Pfam PF11287 Protein of unknown function (DUF3088) 3 111 7.4E-41 T 23-10-2018 IPR021439 Protein of unknown function DUF3088 DLM_3709 9a882a383981959d20aef42440eedb10 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 23-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DLM_3709 9a882a383981959d20aef42440eedb10 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.91 T 23-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DLM_3709 9a882a383981959d20aef42440eedb10 197 Gene3D G3DSA:3.30.230.40 90 197 2.2E-38 T 23-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DLM_3709 9a882a383981959d20aef42440eedb10 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 5.3E-64 T 23-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DLM_3709 9a882a383981959d20aef42440eedb10 197 SUPERFAMILY SSF54211 1 86 5.06E-34 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_3709 9a882a383981959d20aef42440eedb10 197 Gene3D G3DSA:3.30.230.40 1 89 4.3E-37 T 23-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DLM_3709 9a882a383981959d20aef42440eedb10 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 23-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DLM_3709 9a882a383981959d20aef42440eedb10 197 SUPERFAMILY SSF54211 87 179 2.78E-35 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DLM_0293 abc355ff0cd17ad99c53c872d8b2bbd8 206 SUPERFAMILY SSF55821 1 201 2.17E-63 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DLM_0293 abc355ff0cd17ad99c53c872d8b2bbd8 206 Pfam PF01300 Telomere recombination 23 197 6.3E-43 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 DLM_0293 abc355ff0cd17ad99c53c872d8b2bbd8 206 Gene3D G3DSA:3.90.870.10 1 204 4.2E-63 T 23-10-2018 DLM_0293 abc355ff0cd17ad99c53c872d8b2bbd8 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 199 2.2E-62 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 DLM_0189 20cda1652cdf9992656f3975e89202a1 154 Gene3D G3DSA:1.20.58.300 6 126 9.0E-23 T 23-10-2018 DLM_0189 20cda1652cdf9992656f3975e89202a1 154 Pfam PF05130 FlgN protein 1 142 1.0E-26 T 23-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 DLM_0189 20cda1652cdf9992656f3975e89202a1 154 SUPERFAMILY SSF140566 5 126 5.23E-20 T 23-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 DLM_2682 6c85a6c305954b0ac2563570cfbf16b9 364 PIRSF PIRSF016624 1 361 5.5E-76 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_2682 6c85a6c305954b0ac2563570cfbf16b9 364 Pfam PF10123 Mu-like prophage I protein 29 356 2.1E-102 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_3178 d87216ebfd769c3c02490043d4ae59bf 199 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 26 36 - T 23-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 DLM_3178 d87216ebfd769c3c02490043d4ae59bf 199 Gene3D G3DSA:3.40.50.1110 23 198 8.6E-60 T 23-10-2018 IPR036514 SGNH hydrolase superfamily DLM_3178 d87216ebfd769c3c02490043d4ae59bf 199 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 28 180 2.1E-23 T 23-10-2018 IPR013830 SGNH hydrolase-type esterase domain DLM_3178 d87216ebfd769c3c02490043d4ae59bf 199 SUPERFAMILY SSF52266 25 193 1.36E-44 T 23-10-2018 DLM_3297 7a20468e6b6a5e28f3c2c6083737fdd9 591 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 14 574 1.3E-253 T 23-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 DLM_3297 7a20468e6b6a5e28f3c2c6083737fdd9 591 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 12 577 0.0 T 23-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 DLM_3297 7a20468e6b6a5e28f3c2c6083737fdd9 591 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 6 578 43.823 T 23-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 DLM_3297 7a20468e6b6a5e28f3c2c6083737fdd9 591 PIRSF PIRSF000719 6 583 1.2E-235 T 23-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 DLM_1296 c5fb173ad45e48ea6a999a3fd2bd2f44 412 Pfam PF05488 PAAR motif 9 78 3.8E-17 T 23-10-2018 IPR008727 PAAR motif DLM_1165 0e2239f07c6dfbdb5be2dbac9f6ceef1 280 Gene3D G3DSA:1.10.3720.10 1 277 4.8E-57 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1165 0e2239f07c6dfbdb5be2dbac9f6ceef1 280 SUPERFAMILY SSF161098 1 271 1.11E-54 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1165 0e2239f07c6dfbdb5be2dbac9f6ceef1 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 271 3.1E-20 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_2835 c74aaec61ae3a3152708d7dbf9e9c8f1 165 SUPERFAMILY SSF160719 37 128 4.18E-18 T 23-10-2018 DLM_2835 c74aaec61ae3a3152708d7dbf9e9c8f1 165 Gene3D G3DSA:3.10.450.40 27 120 6.6E-7 T 23-10-2018 DLM_2835 c74aaec61ae3a3152708d7dbf9e9c8f1 165 Pfam PF04965 Gene 25-like lysozyme 38 108 1.9E-11 T 23-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DLM_2835 c74aaec61ae3a3152708d7dbf9e9c8f1 165 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 10 137 2.0E-23 T 23-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein DLM_1269 ce41c28fe15d6f72c98a95acec5d120c 424 Pfam PF04233 Phage Mu protein F like protein 57 186 1.4E-28 T 23-10-2018 IPR006528 Phage head morphogenesis domain DLM_1269 ce41c28fe15d6f72c98a95acec5d120c 424 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 109 185 8.3E-17 T 23-10-2018 IPR006528 Phage head morphogenesis domain DLM_1269 ce41c28fe15d6f72c98a95acec5d120c 424 ProDom PD097920 HI1570 NMA1315 211 354 2.0E-15 T 23-10-2018 IPR020388 Putative phage Mu head morphogenesis protein DLM_1447 ac41e7814aad29a971bf09eb3adf982a 101 SUPERFAMILY SSF54909 22 81 1.16E-10 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_1447 ac41e7814aad29a971bf09eb3adf982a 101 Gene3D G3DSA:3.30.70.100 8 94 1.7E-16 T 23-10-2018 DLM_2349 df1ffc229b9c5d6287fac7f563d2082a 163 SUPERFAMILY SSF109854 6 152 7.17E-19 T 23-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DLM_2349 df1ffc229b9c5d6287fac7f563d2082a 163 Gene3D G3DSA:1.20.120.450 1 154 3.8E-23 T 23-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DLM_2349 df1ffc229b9c5d6287fac7f563d2082a 163 Pfam PF05163 DinB family 3 160 1.8E-26 T 23-10-2018 IPR007837 DNA damage-inducible protein DinB DLM_1477 b8e74016576dfe002daa2a0b34a711f0 215 Pfam PF08856 Protein of unknown function (DUF1826) 16 210 8.4E-59 T 23-10-2018 IPR014955 Protein of unknown function DUF1826 DLM_3209 4993c64e0e7a7b9c4545de890b063836 115 Gene3D G3DSA:3.30.429.10 1 114 1.6E-31 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily DLM_3209 4993c64e0e7a7b9c4545de890b063836 115 SUPERFAMILY SSF55331 2 113 1.46E-23 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 Gene3D G3DSA:1.20.210.10 11 532 1.2E-220 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 SUPERFAMILY SSF81442 20 525 4.19E-193 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 32 473 4.8E-151 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 23 524 1.0E-216 T 23-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 353 371 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 381 400 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 186 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 452 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 216 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 269 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 139 151 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 22 47 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 69 92 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 309 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 318 339 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 3.4E-120 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_3724 cf39ddeb1dd6cc37f4137409c709de0b 542 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 250 304 - T 23-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 SUPERFAMILY SSF103190 90 189 1.61E-10 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 623 1.7E-39 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 SMART SM00304 328 381 1.9E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 SUPERFAMILY SSF58104 349 657 2.49E-63 T 23-10-2018 DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 Pfam PF17201 Cache 3/Cache 2 fusion domain 21 303 1.6E-69 T 23-10-2018 IPR033462 Cache 3/Cache 2 fusion domain DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 Pfam PF00672 HAMP domain 330 376 9.0E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 SMART SM00283 396 657 5.5E-50 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 Gene3D G3DSA:3.30.450.20 190 304 1.7E-5 T 23-10-2018 DLM_1041 a9ac2e510ff1f2a02306fa9e1e837e01 658 Gene3D G3DSA:1.10.287.950 328 658 6.7E-63 T 23-10-2018 DLM_2312 da537f460d963f0f5313475b4a6318f6 211 Gene3D G3DSA:1.20.120.1760 17 210 2.3E-23 T 23-10-2018 DLM_2312 da537f460d963f0f5313475b4a6318f6 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 37 105 8.0E-9 T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DLM_1535 a8f985fe4dad203bbd4196855854c4ac 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 2.3E-33 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_1905 744ef73e2a76cd6972d31368cf2470bd 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 252 3.1E-22 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_1905 744ef73e2a76cd6972d31368cf2470bd 258 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 53 147 7.6E-26 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DLM_1905 744ef73e2a76cd6972d31368cf2470bd 258 Gene3D G3DSA:1.10.3720.10 49 256 1.4E-51 T 23-10-2018 IPR035906 MetI-like superfamily DLM_1905 744ef73e2a76cd6972d31368cf2470bd 258 SUPERFAMILY SSF161098 51 241 6.02E-43 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2477 1b08ab551fd50cc42f39e67e9346edaa 106 PIRSF PIRSF037181 1 106 1.4E-33 T 23-10-2018 IPR014958 DGC DLM_2477 1b08ab551fd50cc42f39e67e9346edaa 106 Pfam PF08859 DGC domain 1 89 2.8E-22 T 23-10-2018 IPR014958 DGC DLM_1262 b3978b288a309b33748738c7175285f3 221 Pfam PF08873 Domain of unknown function (DUF1834) 1 206 7.4E-65 T 23-10-2018 IPR014972 Bacteriophage Mu, Gp37 DLM_0481 7c9ef3c272f2eb6b919c39ce95c0e163 118 Gene3D G3DSA:2.60.40.1090 1 117 1.4E-20 T 23-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 DLM_0481 7c9ef3c272f2eb6b919c39ce95c0e163 118 SUPERFAMILY SSF49401 3 118 5.47E-18 T 23-10-2018 IPR008966 Adhesion domain superfamily DLM_0481 7c9ef3c272f2eb6b919c39ce95c0e163 118 Pfam PF16970 Type-1 fimbrial protein, A 1 118 3.8E-11 T 23-10-2018 IPR039458 Type-1 fimbrial protein, A DLM_2813 12bf9c7a4f20bf3c52451a020aa8714a 182 SUPERFAMILY SSF81342 4 176 3.53E-30 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DLM_2813 12bf9c7a4f20bf3c52451a020aa8714a 182 Pfam PF01292 Prokaryotic cytochrome b561 9 177 1.1E-23 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DLM_4096 e3b62cd72ff78449e962ba4c43d7e16d 617 Pfam PF03235 Protein of unknown function DUF262 11 252 3.3E-31 T 23-10-2018 IPR004919 Domain of unknown function DUF262 DLM_2685 b88b65cbbba34b4b4dbb336c62305211 278 Pfam PF04233 Phage Mu protein F like protein 62 191 1.1E-32 T 23-10-2018 IPR006528 Phage head morphogenesis domain DLM_2685 b88b65cbbba34b4b4dbb336c62305211 278 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 114 190 4.2E-18 T 23-10-2018 IPR006528 Phage head morphogenesis domain DLM_2685 b88b65cbbba34b4b4dbb336c62305211 278 ProDom PD097920 HI1570 NMA1315 216 273 6.0E-5 T 23-10-2018 IPR020388 Putative phage Mu head morphogenesis protein DLM_2159 b046626eb3292bfb10fc78cd0dd0674b 341 Pfam PF04909 Amidohydrolase 3 330 2.4E-58 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_2159 b046626eb3292bfb10fc78cd0dd0674b 341 Gene3D G3DSA:3.20.20.140 1 340 5.7E-98 T 23-10-2018 DLM_2159 b046626eb3292bfb10fc78cd0dd0674b 341 SUPERFAMILY SSF51556 1 334 3.25E-94 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_1929 497edd641895da6936a50758770b183d 377 TIGRFAM TIGR02484 CitB: CitB domain protein 25 376 1.1E-120 T 23-10-2018 IPR012830 Citrate utilization protein B DLM_1929 497edd641895da6936a50758770b183d 377 SUPERFAMILY SSF103501 164 376 3.66E-29 T 23-10-2018 IPR036197 NarG-like superfamily DLM_1929 497edd641895da6936a50758770b183d 377 SUPERFAMILY SSF54862 30 84 3.56E-6 T 23-10-2018 DLM_4147 c834cd0b735ecfb5cb75047c4c5f8f77 225 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 212 7.8E-47 T 23-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DLM_4147 c834cd0b735ecfb5cb75047c4c5f8f77 225 SUPERFAMILY SSF100950 1 217 2.93E-51 T 23-10-2018 IPR037171 NagB/RpiA transferase-like DLM_4147 c834cd0b735ecfb5cb75047c4c5f8f77 225 Gene3D G3DSA:3.40.50.1360 1 225 4.0E-63 T 23-10-2018 DLM_4147 c834cd0b735ecfb5cb75047c4c5f8f77 225 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 8 213 1.1E-52 T 23-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 DLM_3593 2308889134912828a9a27b768c52f0b1 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 303 3.2E-41 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_2314 dce590f2cfed4f11e8608c0aa470ad4b 217 SMART SM00563 38 159 1.3E-20 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DLM_2314 dce590f2cfed4f11e8608c0aa470ad4b 217 Pfam PF01553 Acyltransferase 25 155 8.0E-22 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DLM_2314 dce590f2cfed4f11e8608c0aa470ad4b 217 SUPERFAMILY SSF69593 5 204 7.19E-27 T 23-10-2018 DLM_4170 672a1bad75715a2555747b4acf81adea 217 Gene3D G3DSA:3.40.30.10 1 79 1.0E-25 T 23-10-2018 DLM_4170 672a1bad75715a2555747b4acf81adea 217 SUPERFAMILY SSF52833 1 100 1.04E-21 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_4170 672a1bad75715a2555747b4acf81adea 217 SUPERFAMILY SSF47616 75 204 1.12E-18 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DLM_4170 672a1bad75715a2555747b4acf81adea 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 75 2.3E-16 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DLM_4170 672a1bad75715a2555747b4acf81adea 217 Gene3D G3DSA:1.20.1050.10 80 217 1.2E-33 T 23-10-2018 DLM_0106 d5a6dc768eea32d2920b1d8c7dec6f49 209 Pfam PF09335 SNARE associated Golgi protein 32 159 5.7E-25 T 23-10-2018 IPR032816 SNARE associated Golgi protein DLM_3687 f68e0a6d6ab118d571972d6d8e8b0597 738 Gene3D G3DSA:2.40.170.20 165 738 3.5E-56 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DLM_3687 f68e0a6d6ab118d571972d6d8e8b0597 738 SUPERFAMILY SSF56935 37 738 2.93E-74 T 23-10-2018 DLM_3687 f68e0a6d6ab118d571972d6d8e8b0597 738 Gene3D G3DSA:2.170.130.10 26 156 5.9E-13 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DLM_3687 f68e0a6d6ab118d571972d6d8e8b0597 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 152 3.0E-12 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain DLM_0649 06226491fa4d4f51b67510b6f779769f 245 SUPERFAMILY SSF53098 5 205 5.79E-8 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily DLM_0649 06226491fa4d4f51b67510b6f779769f 245 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 151 239 3.1E-6 T 23-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like DLM_0649 06226491fa4d4f51b67510b6f779769f 245 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 48 123 1.6E-12 T 23-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like DLM_0526 e2e8660a5da507b734f984b2e075040d 129 Pfam PF01638 HxlR-like helix-turn-helix 26 113 2.2E-24 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type DLM_0526 e2e8660a5da507b734f984b2e075040d 129 SUPERFAMILY SSF46785 14 121 7.88E-31 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0526 e2e8660a5da507b734f984b2e075040d 129 Gene3D G3DSA:1.10.10.10 12 129 1.1E-36 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_1598 fad61f2429ec8c3a71fbf13490e68587 494 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 3.4E-195 T 23-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DLM_1598 fad61f2429ec8c3a71fbf13490e68587 494 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 490 2.3E-218 T 23-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DLM_3290 db8f4654ee14f6bf84b0f1e9880b3815 254 Gene3D G3DSA:3.20.20.190 13 241 1.4E-71 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DLM_3290 db8f4654ee14f6bf84b0f1e9880b3815 254 SUPERFAMILY SSF51695 10 247 3.14E-59 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DLM_3290 db8f4654ee14f6bf84b0f1e9880b3815 254 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 17 244 5.5E-31 T 23-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DLM_1257 48158e3f6542537ddee508466c6c6f4c 704 Pfam PF10145 Phage-related minor tail protein 187 395 7.2E-16 T 23-10-2018 IPR010090 Phage tail tape measure protein DLM_3141 b2a272e5317fcb4c7c947493d2d48cc7 165 Pfam PF06243 Phenylacetic acid degradation B 79 161 3.2E-20 T 23-10-2018 IPR009359 Phenylacetic acid degradation B DLM_3141 b2a272e5317fcb4c7c947493d2d48cc7 165 Pfam PF06243 Phenylacetic acid degradation B 7 64 3.7E-22 T 23-10-2018 IPR009359 Phenylacetic acid degradation B DLM_3141 b2a272e5317fcb4c7c947493d2d48cc7 165 Gene3D G3DSA:3.10.20.520 72 135 4.5E-15 T 23-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B DLM_3141 b2a272e5317fcb4c7c947493d2d48cc7 165 Gene3D G3DSA:3.10.20.520 3 66 2.2E-23 T 23-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B DLM_3342 5cdb6b006af51483d3b03f1353789d6e 295 Pfam PF11740 Plasmid replication region DNA-binding N-term 12 128 8.6E-11 T 23-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain DLM_0500 1fa5f2f901148baa71800d7011cb5081 334 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 299 37.529 T 23-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 DLM_0500 1fa5f2f901148baa71800d7011cb5081 334 Pfam PF04381 Putative exonuclease, RdgC 1 296 1.2E-109 T 23-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 DLM_3082 11204295c5930501d83aa218c847334f 165 Pfam PF13511 Domain of unknown function (DUF4124) 11 45 7.8E-12 T 23-10-2018 IPR025392 Domain of unknown function DUF4124 DLM_0269 5b6d5d0534c35bbc159355f9adfc5931 355 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 335 6.6E-86 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DLM_0269 5b6d5d0534c35bbc159355f9adfc5931 355 Gene3D G3DSA:3.20.20.70 3 355 4.5E-125 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_0269 5b6d5d0534c35bbc159355f9adfc5931 355 SUPERFAMILY SSF51395 3 355 1.02E-112 T 23-10-2018 DLM_1680 42bf4295fb5e8016764af003049f4103 402 PIRSF PIRSF003085 15 402 4.1E-117 T 23-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 DLM_1680 42bf4295fb5e8016764af003049f4103 402 SUPERFAMILY SSF53335 137 397 5.47E-74 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_1680 42bf4295fb5e8016764af003049f4103 402 Pfam PF02353 Mycolic acid cyclopropane synthetase 129 395 2.6E-79 T 23-10-2018 DLM_1680 42bf4295fb5e8016764af003049f4103 402 Gene3D G3DSA:3.40.50.150 135 401 2.5E-92 T 23-10-2018 DLM_3634 44838dfca925d7ee3e98b8245414b951 174 Pfam PF00857 Isochorismatase family 4 139 6.2E-29 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 DLM_3634 44838dfca925d7ee3e98b8245414b951 174 SUPERFAMILY SSF52499 3 160 8.77E-39 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_3634 44838dfca925d7ee3e98b8245414b951 174 Gene3D G3DSA:3.40.50.850 3 162 9.5E-38 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 PRINTS PR00050 Cold shock protein signature 4 19 5.3E-13 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 PRINTS PR00050 Cold shock protein signature 25 34 5.3E-13 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 PRINTS PR00050 Cold shock protein signature 40 58 5.3E-13 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 SUPERFAMILY SSF50249 1 66 5.78E-23 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 PIRSF PIRSF002599 1 67 1.6E-21 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 Gene3D G3DSA:2.40.50.140 2 65 1.9E-25 T 23-10-2018 DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-10-2018 IPR019844 Cold-shock conserved site DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.2E-26 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DLM_2190 2728f1d5e837dbfdce5a3f8fbec5ae16 67 SMART SM00357 3 67 8.9E-25 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 DLM_3810 0051115d60046687a7fe9db39bb325e3 334 Pfam PF01435 Peptidase family M48 196 319 2.1E-11 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DLM_1575 6aeaf92f8826f9819c8ff705e7fed370 361 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 131 2.6E-35 T 23-10-2018 IPR010657 ImpA, N-terminal DLM_1575 6aeaf92f8826f9819c8ff705e7fed370 361 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 4 360 2.6E-112 T 23-10-2018 IPR017740 Type VI secretion system-associated, ImpA DLM_3561 8d20a2ddf5b85ee7015498b1f51852ce 207 Pfam PF01794 Ferric reductase like transmembrane component 57 170 1.2E-16 T 23-10-2018 IPR013130 Ferric reductase transmembrane component-like domain DLM_3561 8d20a2ddf5b85ee7015498b1f51852ce 207 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 17 207 20.788 T 23-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 DLM_3538 2210c80bf8deaabbf1b9078ab97d6e40 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 86 316 2.9E-20 T 23-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DLM_3538 2210c80bf8deaabbf1b9078ab97d6e40 353 Gene3D G3DSA:3.40.50.2000 1 159 3.3E-27 T 23-10-2018 DLM_3538 2210c80bf8deaabbf1b9078ab97d6e40 353 Gene3D G3DSA:3.40.50.2000 174 344 1.4E-31 T 23-10-2018 DLM_3538 2210c80bf8deaabbf1b9078ab97d6e40 353 SUPERFAMILY SSF53756 5 341 1.99E-57 T 23-10-2018 DLM_2126 b74b3c38794feb65f3bb9a1bde870ea6 311 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 30 292 2.7E-51 T 23-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 DLM_2126 b74b3c38794feb65f3bb9a1bde870ea6 311 SUPERFAMILY SSF51197 27 295 2.24E-70 T 23-10-2018 DLM_2126 b74b3c38794feb65f3bb9a1bde870ea6 311 Gene3D G3DSA:3.60.130.10 16 305 3.4E-75 T 23-10-2018 DLM_1267 25da6be5def6f3ee4e8b574725f2eb8d 352 Pfam PF10123 Mu-like prophage I protein 23 349 3.4E-100 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_1267 25da6be5def6f3ee4e8b574725f2eb8d 352 PIRSF PIRSF016624 3 347 3.4E-74 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_3843 c14754b3f0ef35c10d5d4bb9047e868f 198 Gene3D G3DSA:1.10.10.60 5 51 1.1E-14 T 23-10-2018 DLM_3843 c14754b3f0ef35c10d5d4bb9047e868f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.5E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_3843 c14754b3f0ef35c10d5d4bb9047e868f 198 Gene3D G3DSA:1.10.357.10 53 189 1.4E-31 T 23-10-2018 DLM_3843 c14754b3f0ef35c10d5d4bb9047e868f 198 SUPERFAMILY SSF48498 84 189 4.15E-17 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DLM_3843 c14754b3f0ef35c10d5d4bb9047e868f 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.3E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_3843 c14754b3f0ef35c10d5d4bb9047e868f 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.3E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DLM_3843 c14754b3f0ef35c10d5d4bb9047e868f 198 SUPERFAMILY SSF46689 3 77 2.77E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1883 0911acfec8026b67138b278d0f56df16 130 Gene3D G3DSA:3.10.450.50 2 127 2.8E-9 T 23-10-2018 DLM_1883 0911acfec8026b67138b278d0f56df16 130 SUPERFAMILY SSF54427 3 117 1.88E-8 T 23-10-2018 IPR032710 NTF2-like domain superfamily DLM_0268 7efaa0dd13f98645796a323511079fa4 121 SUPERFAMILY SSF46785 1 113 4.18E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DLM_0268 7efaa0dd13f98645796a323511079fa4 121 Gene3D G3DSA:1.10.10.10 1 121 2.1E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DLM_0268 7efaa0dd13f98645796a323511079fa4 121 Pfam PF01638 HxlR-like helix-turn-helix 1 78 4.5E-16 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type DLM_2581 0e3cceb2b02dbe0fc99280e250c765ce 347 Pfam PF01145 SPFH domain / Band 7 family 43 262 6.7E-13 T 23-10-2018 IPR001107 Band 7 domain DLM_0814 e16a3c0d8391c9c94bc6c91f9df94117 114 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 3 91 3.7E-16 T 23-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 DLM_0814 e16a3c0d8391c9c94bc6c91f9df94117 114 PIRSF PIRSF020408 1 105 8.4E-42 T 23-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 DLM_1341 567032d4fa41e67dc3ddaf6d0080c2c7 115 SUPERFAMILY SSF54909 1 99 1.11E-26 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_1341 567032d4fa41e67dc3ddaf6d0080c2c7 115 Gene3D G3DSA:3.30.70.100 1 94 2.5E-24 T 23-10-2018 DLM_1341 567032d4fa41e67dc3ddaf6d0080c2c7 115 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.2E-15 T 23-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DLM_2305 f717ebc52e806b4613f3e63e2cdc492c 146 Gene3D G3DSA:2.40.50.140 86 140 3.6E-8 T 23-10-2018 DLM_2305 f717ebc52e806b4613f3e63e2cdc492c 146 Pfam PF01957 NfeD-like C-terminal, partner-binding 5 138 1.0E-13 T 23-10-2018 IPR002810 NfeD-like, C-terminal domain DLM_2552 71b06159fdc01d59172e61153ef156f2 373 Gene3D G3DSA:3.90.226.10 3 373 1.9E-130 T 23-10-2018 DLM_2552 71b06159fdc01d59172e61153ef156f2 373 SUPERFAMILY SSF52096 15 344 1.24E-58 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_2552 71b06159fdc01d59172e61153ef156f2 373 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 358 6.2E-117 T 23-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 DLM_2177 11e48b6e3b6fd57ffc36b27c7f041f7b 245 Gene3D G3DSA:3.40.190.10 36 243 1.2E-16 T 23-10-2018 DLM_2177 11e48b6e3b6fd57ffc36b27c7f041f7b 245 SUPERFAMILY SSF53850 35 244 2.35E-20 T 23-10-2018 DLM_2177 11e48b6e3b6fd57ffc36b27c7f041f7b 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 244 4.8E-13 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DLM_2177 11e48b6e3b6fd57ffc36b27c7f041f7b 245 Gene3D G3DSA:3.40.190.10 111 209 1.2E-16 T 23-10-2018 DLM_1581 4890616f32f82f589feff9d1e506a977 204 Pfam PF05947 Type VI secretion system, TssF 6 197 2.0E-72 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like DLM_4450 3f7e3b42938ee1ff4b000b476ab67f23 431 Pfam PF13440 Polysaccharide biosynthesis protein 38 337 1.0E-19 T 23-10-2018 DLM_4029 57a919f9e559f665b026d4244be15403 320 Pfam PF00892 EamA-like transporter family 3 110 1.6E-8 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_4029 57a919f9e559f665b026d4244be15403 320 SUPERFAMILY SSF103481 221 304 8.63E-7 T 23-10-2018 DLM_3736 f878c3b00a42aa4652c17ae607fff4ec 129 Pfam PF11304 Protein of unknown function (DUF3106) 31 120 2.7E-20 T 23-10-2018 IPR021455 Protein of unknown function DUF3106 DLM_0749 3b2d6f3cf96100e45582587db2bf737f 198 Pfam PF00227 Proteasome subunit 2 169 1.2E-6 T 23-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DLM_0749 3b2d6f3cf96100e45582587db2bf737f 198 SUPERFAMILY SSF56235 1 186 6.9E-27 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_0749 3b2d6f3cf96100e45582587db2bf737f 198 Gene3D G3DSA:3.60.20.10 2 192 6.9E-32 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DLM_2264 d10197a30c7df4a87db7c1664fce3b94 388 Gene3D G3DSA:2.120.10.30 112 385 1.0E-16 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DLM_2264 d10197a30c7df4a87db7c1664fce3b94 388 SUPERFAMILY SSF50952 35 383 8.24E-27 T 23-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 DLM_2264 d10197a30c7df4a87db7c1664fce3b94 388 Pfam PF07995 Glucose / Sorbosone dehydrogenase 144 383 3.0E-9 T 23-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 SUPERFAMILY SSF54919 1 140 4.06E-56 T 23-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 Gene3D G3DSA:3.30.70.141 1 141 7.6E-58 T 23-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 SMART SM00562 3 140 1.9E-83 T 23-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.03 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.2E-37 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.2E-37 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.2E-37 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.2E-37 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.2E-37 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_0565 26fe3f689ab8150e9757c5e0adb3a561 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 4.3E-54 T 23-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DLM_1844 37304b7d3088b882b1e61851880a4614 202 SUPERFAMILY SSF54909 1 90 1.11E-17 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_1844 37304b7d3088b882b1e61851880a4614 202 Gene3D G3DSA:3.30.70.100 10 97 2.3E-7 T 23-10-2018 DLM_1844 37304b7d3088b882b1e61851880a4614 202 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 79 3.6E-6 T 23-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DLM_1372 4a7f1fa026fedcc26d5860b5d2e84d0f 286 Pfam PF01774 UreD urease accessory protein 63 259 1.2E-43 T 23-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DLM_1372 4a7f1fa026fedcc26d5860b5d2e84d0f 286 Hamap MF_01384 Urease accessory protein UreD [ureD]. 20 270 25.204 T 23-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DLM_4315 9886c65d464dc8471d5cec61e83381cb 184 Pfam PF14334 Domain of unknown function (DUF4390) 15 178 1.2E-41 T 23-10-2018 IPR025500 Protein of unknown function DUF4390 DLM_2232 56bfcafba9a8007ab0d406b050ae2173 217 Pfam PF11745 Protein of unknown function (DUF3304) 103 186 2.2E-20 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_3437 dd1c89a1372f2f6e5d3a9ce2f3b28202 71 Pfam PF04341 Protein of unknown function, DUF485 12 69 1.2E-8 T 23-10-2018 IPR007436 Protein of unknown function DUF485 DLM_0961 c1cc921a15688f1b0b98cd29c6d8a478 729 SUPERFAMILY SSF58104 419 728 3.92E-59 T 23-10-2018 DLM_0961 c1cc921a15688f1b0b98cd29c6d8a478 729 SMART SM00283 466 727 6.5E-56 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_0961 c1cc921a15688f1b0b98cd29c6d8a478 729 Gene3D G3DSA:1.10.287.950 437 728 1.6E-56 T 23-10-2018 DLM_0961 c1cc921a15688f1b0b98cd29c6d8a478 729 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 543 691 2.7E-40 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DLM_4019 106d65c2f33dc0be4ac120304cb0182c 433 Gene3D G3DSA:1.10.3210.10 235 399 4.5E-15 T 23-10-2018 DLM_4019 106d65c2f33dc0be4ac120304cb0182c 433 SUPERFAMILY SSF109604 214 431 9.42E-27 T 23-10-2018 DLM_4019 106d65c2f33dc0be4ac120304cb0182c 433 Pfam PF08668 HDOD domain 247 359 3.4E-7 T 23-10-2018 IPR013976 Metal-dependent hydrolase HDOD DLM_4019 106d65c2f33dc0be4ac120304cb0182c 433 Gene3D G3DSA:3.20.20.450 35 234 3.4E-19 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4019 106d65c2f33dc0be4ac120304cb0182c 433 SUPERFAMILY SSF141868 36 231 3.01E-29 T 23-10-2018 IPR035919 EAL domain superfamily DLM_4019 106d65c2f33dc0be4ac120304cb0182c 433 PIRSF PIRSF003180 32 432 3.4E-100 T 23-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing DLM_4019 106d65c2f33dc0be4ac120304cb0182c 433 SMART SM00052 14 228 9.5E-7 T 23-10-2018 IPR001633 EAL domain DLM_4019 106d65c2f33dc0be4ac120304cb0182c 433 Pfam PF00563 EAL domain 76 223 1.6E-12 T 23-10-2018 IPR001633 EAL domain DLM_0977 d4961f8d0278a224d49a1e5e17bcfc1e 318 Pfam PF02120 Flagellar hook-length control protein FliK 198 280 3.9E-20 T 23-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal DLM_0977 d4961f8d0278a224d49a1e5e17bcfc1e 318 Gene3D G3DSA:3.30.750.140 176 291 3.2E-32 T 23-10-2018 IPR038610 FliK-like, C-terminal domain superfamily DLM_4025 2606ef3d9ba8cae31e79598d28cdcc30 193 Pfam PF02325 YGGT family 12 80 3.1E-11 T 23-10-2018 IPR003425 CCB3/YggT GO:0016020 DLM_4025 2606ef3d9ba8cae31e79598d28cdcc30 193 Pfam PF02325 YGGT family 113 174 3.9E-16 T 23-10-2018 IPR003425 CCB3/YggT GO:0016020 DLM_0514 18b257bf2365751d10bc95c987107ba2 479 Pfam PF00171 Aldehyde dehydrogenase family 25 476 3.6E-155 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DLM_0514 18b257bf2365751d10bc95c987107ba2 479 Gene3D G3DSA:3.40.309.10 256 445 2.6E-160 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DLM_0514 18b257bf2365751d10bc95c987107ba2 479 Gene3D G3DSA:3.40.605.10 27 474 2.6E-160 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DLM_0514 18b257bf2365751d10bc95c987107ba2 479 SUPERFAMILY SSF53720 5 477 2.09E-154 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DLM_3980 8ed4c648de22f7da464ff07ca8ed1a94 252 SUPERFAMILY SSF53448 4 146 7.36E-26 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_3980 8ed4c648de22f7da464ff07ca8ed1a94 252 Pfam PF00535 Glycosyl transferase family 2 6 137 7.7E-19 T 23-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DLM_3980 8ed4c648de22f7da464ff07ca8ed1a94 252 Gene3D G3DSA:3.90.550.10 2 231 1.6E-25 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_3850 93a7b92fe077d93a0e23de293a10c2a6 208 Pfam PF01810 LysE type translocator 16 199 2.5E-27 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_2435 21a06c46c68e60188037b6d50a193455 261 SUPERFAMILY SSF52096 3 259 9.08E-67 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DLM_2435 21a06c46c68e60188037b6d50a193455 261 Gene3D G3DSA:3.90.226.10 3 202 7.7E-56 T 23-10-2018 DLM_2435 21a06c46c68e60188037b6d50a193455 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 5.6E-47 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DLM_2435 21a06c46c68e60188037b6d50a193455 261 Gene3D G3DSA:1.10.12.10 204 261 4.6E-17 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DLM_3545 11745ad915ea9249e1d778c83fa19972 135 Pfam PF03610 PTS system fructose IIA component 3 104 3.6E-19 T 23-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DLM_3545 11745ad915ea9249e1d778c83fa19972 135 SUPERFAMILY SSF53062 1 125 9.81E-30 T 23-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DLM_3545 11745ad915ea9249e1d778c83fa19972 135 Gene3D G3DSA:3.40.50.510 1 132 1.9E-33 T 23-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DLM_3652 ba9be0b92dc857960062d6852bb80b63 298 Pfam PF04773 FecR protein 94 184 3.5E-13 T 23-10-2018 IPR006860 FecR protein DLM_3652 ba9be0b92dc857960062d6852bb80b63 298 Gene3D G3DSA:2.60.120.1440 81 212 3.3E-14 T 23-10-2018 DLM_3652 ba9be0b92dc857960062d6852bb80b63 298 Pfam PF16220 Domain of unknown function (DUF4880) 3 36 5.8E-10 T 23-10-2018 IPR032623 FecR, N-terminal DLM_3652 ba9be0b92dc857960062d6852bb80b63 298 PIRSF PIRSF018266 1 298 7.0E-72 T 23-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component DLM_0290 21be0799168a183cdf5437f0eeabb1ab 71 Gene3D G3DSA:3.10.290.10 1 70 8.2E-24 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DLM_0290 21be0799168a183cdf5437f0eeabb1ab 71 SUPERFAMILY SSF55174 3 69 1.7E-18 T 23-10-2018 DLM_0290 21be0799168a183cdf5437f0eeabb1ab 71 Pfam PF13275 S4 domain 6 69 9.7E-25 T 23-10-2018 DLM_0402 47aee76f657536796449813c9a1ddd5a 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 8.0E-30 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DLM_0402 47aee76f657536796449813c9a1ddd5a 138 Gene3D G3DSA:3.30.420.270 65 131 9.1E-10 T 23-10-2018 DLM_3147 6a33a00d012068138e486bd4622628ad 202 Gene3D G3DSA:2.160.10.10 3 172 7.7E-51 T 23-10-2018 DLM_3147 6a33a00d012068138e486bd4622628ad 202 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 3.3E-8 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_3147 6a33a00d012068138e486bd4622628ad 202 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 89 121 7.5E-6 T 23-10-2018 IPR001451 Hexapeptide repeat DLM_3147 6a33a00d012068138e486bd4622628ad 202 SUPERFAMILY SSF51161 3 168 1.15E-42 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily DLM_0291 04047ef19d678857a7ab47b951600723 61 Pfam PF09791 Oxidoreductase-like protein, N-terminal 14 53 1.6E-9 T 23-10-2018 IPR019180 Oxidoreductase-like, N-terminal DLM_2429 332f9b3f777b142e8713b3a3822eed06 444 Gene3D G3DSA:1.20.1740.10 4 433 2.1E-77 T 23-10-2018 DLM_2429 332f9b3f777b142e8713b3a3822eed06 444 PIRSF PIRSF006060 1 438 7.1E-70 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_2429 332f9b3f777b142e8713b3a3822eed06 444 Pfam PF13520 Amino acid permease 19 402 1.6E-38 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_0754 ff35799eff96abb0264367e83b7ff602 235 SUPERFAMILY SSF55781 84 223 1.79E-17 T 23-10-2018 DLM_0754 ff35799eff96abb0264367e83b7ff602 235 Gene3D G3DSA:3.30.450.40 73 227 1.4E-17 T 23-10-2018 IPR029016 GAF-like domain superfamily DLM_3589 96faa554b2e53e8d97fd61d6f3abd01d 201 Gene3D G3DSA:3.20.20.70 1 198 6.0E-60 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DLM_3589 96faa554b2e53e8d97fd61d6f3abd01d 201 Pfam PF01081 KDPG and KHG aldolase 3 174 4.1E-27 T 23-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DLM_3589 96faa554b2e53e8d97fd61d6f3abd01d 201 SUPERFAMILY SSF51569 1 185 3.66E-52 T 23-10-2018 DLM_1479 f8abaf6cd51bf7042a0c44214ec0b113 304 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 144 301 4.0E-24 T 23-10-2018 IPR005642 Lysine exporter LysO DLM_1479 f8abaf6cd51bf7042a0c44214ec0b113 304 Pfam PF03956 Lysine exporter LysO 119 299 9.5E-41 T 23-10-2018 IPR005642 Lysine exporter LysO DLM_3406 397c7960d76881784464d397661b6294 364 Pfam PF02661 Fic/DOC family 108 214 2.2E-15 T 23-10-2018 IPR003812 Fido domain DLM_3406 397c7960d76881784464d397661b6294 364 Gene3D G3DSA:1.10.3290.10 21 282 4.0E-47 T 23-10-2018 IPR036597 Fido-like domain superfamily DLM_3406 397c7960d76881784464d397661b6294 364 SUPERFAMILY SSF140931 86 280 6.28E-34 T 23-10-2018 IPR036597 Fido-like domain superfamily DLM_1650 167c2204de312801be438c1535540ab2 130 Pfam PF09361 Phasin protein 13 101 3.5E-13 T 23-10-2018 IPR018968 Phasin DLM_1650 167c2204de312801be438c1535540ab2 130 TIGRFAM TIGR01841 phasin: phasin family protein 27 101 1.4E-9 T 23-10-2018 IPR010127 Phasin, subfamily 1 DLM_3852 9fcb3371bff2a337eebc18108109b991 181 Gene3D G3DSA:3.40.630.30 5 170 1.2E-36 T 23-10-2018 DLM_3852 9fcb3371bff2a337eebc18108109b991 181 SUPERFAMILY SSF55729 1 151 1.05E-30 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_3852 9fcb3371bff2a337eebc18108109b991 181 Pfam PF00583 Acetyltransferase (GNAT) family 32 143 5.5E-16 T 23-10-2018 IPR000182 GNAT domain DLM_2679 cc570d04ef6a70ff841617372914aba0 138 SUPERFAMILY SSF160059 85 136 2.68E-7 T 23-10-2018 DLM_1304 9e95357c33593b8cb6be8c78506b3e19 110 Pfam PF11745 Protein of unknown function (DUF3304) 2 85 3.4E-23 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_3951 600fb29bd2d6fc7d79ebffd310bbcf5b 195 PIRSF PIRSF006324 1 193 5.8E-41 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_3951 600fb29bd2d6fc7d79ebffd310bbcf5b 195 Pfam PF01810 LysE type translocator 7 188 2.5E-27 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_0509 969601f509ccca11133adaa61bc1279f 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 475 1.3E-102 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DLM_0509 969601f509ccca11133adaa61bc1279f 492 SUPERFAMILY SSF56954 2 479 8.37E-98 T 23-10-2018 DLM_0509 969601f509ccca11133adaa61bc1279f 492 Gene3D G3DSA:2.20.200.10 109 365 1.0E-117 T 23-10-2018 DLM_0509 969601f509ccca11133adaa61bc1279f 492 Gene3D G3DSA:1.20.1600.10 62 477 1.0E-117 T 23-10-2018 DLM_0509 969601f509ccca11133adaa61bc1279f 492 Pfam PF02321 Outer membrane efflux protein 291 474 4.7E-24 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_0509 969601f509ccca11133adaa61bc1279f 492 Pfam PF02321 Outer membrane efflux protein 72 267 5.1E-26 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DLM_1279 d45ac382803a21da5d2fb251480dfcbd 144 SUPERFAMILY SSF46689 10 131 1.43E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_1279 d45ac382803a21da5d2fb251480dfcbd 144 Pfam PF08765 Mor transcription activator family 31 143 2.3E-22 T 23-10-2018 IPR014875 Mor transcription activator DLM_1696 c1a49f426ed3ba0d8ce5c9dd913820b8 172 SUPERFAMILY SSF55961 24 166 2.37E-7 T 23-10-2018 DLM_1696 c1a49f426ed3ba0d8ce5c9dd913820b8 172 Gene3D G3DSA:3.30.530.20 1 167 7.9E-65 T 23-10-2018 IPR023393 START-like domain superfamily DLM_2412 b13c166b327524e8d3c65fcdaf5b59ed 214 Pfam PF09335 SNARE associated Golgi protein 49 173 2.6E-19 T 23-10-2018 IPR032816 SNARE associated Golgi protein DLM_0321 286e4b5738c857ede6c4d46eebb5fbde 249 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 219 2.0E-25 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DLM_2149 4c3b3d19477dbaa1426f0b916e2410e6 287 SUPERFAMILY SSF51658 6 277 1.93E-51 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily DLM_2149 4c3b3d19477dbaa1426f0b916e2410e6 287 Pfam PF01261 Xylose isomerase-like TIM barrel 22 224 1.7E-24 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DLM_2149 4c3b3d19477dbaa1426f0b916e2410e6 287 Gene3D G3DSA:3.20.20.150 3 283 8.9E-50 T 23-10-2018 DLM_2676 77f7d66274f757076c6160ec63973e2e 75 Pfam PF10948 Protein of unknown function (DUF2635) 4 48 1.7E-6 T 23-10-2018 IPR024400 Protein of unknown function DUF2635 DLM_2696 b111abf0bc685bc324dc4d24a887c491 136 Pfam PF06252 Protein of unknown function (DUF1018) 20 130 3.1E-30 T 23-10-2018 IPR009363 Bacteriophage Mu, Gp16 DLM_2626 25593437b873984b35aaf1065116a978 312 Gene3D G3DSA:2.180.10.10 50 174 9.1E-37 T 23-10-2018 DLM_2626 25593437b873984b35aaf1065116a978 312 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 181 269 7.1E-15 T 23-10-2018 IPR032871 AHH domain-containing protein DLM_2626 25593437b873984b35aaf1065116a978 312 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 93 174 1.3E-29 T 23-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DLM_2626 25593437b873984b35aaf1065116a978 312 PRINTS PR00394 RHS protein signature 60 80 2.1E-8 T 23-10-2018 IPR001826 RHS protein DLM_2626 25593437b873984b35aaf1065116a978 312 PRINTS PR00394 RHS protein signature 142 161 2.1E-8 T 23-10-2018 IPR001826 RHS protein DLM_2626 25593437b873984b35aaf1065116a978 312 Pfam PF03527 RHS protein 66 101 1.2E-13 T 23-10-2018 IPR001826 RHS protein DLM_1721 c270f1e159f644b843af1803b7b0658d 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 16 95 1.3E-22 T 23-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DLM_1721 c270f1e159f644b843af1803b7b0658d 98 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 96 2.2E-31 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit DLM_1721 c270f1e159f644b843af1803b7b0658d 98 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 98 42.865 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit DLM_1721 c270f1e159f644b843af1803b7b0658d 98 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 2.0E-23 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit DLM_3088 d5a798ecc446e5517bb2c65bdf824afc 237 Pfam PF04172 LrgB-like family 21 234 1.3E-72 T 23-10-2018 IPR007300 CidB/LrgB family DLM_1605 3c61d97882a02881965389a831650e15 104 SUPERFAMILY SSF54909 1 76 1.29E-7 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_2730 39ba4d43f89d0abbdbac6c6f48680c34 114 Gene3D G3DSA:2.60.40.1090 1 114 1.9E-21 T 23-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 DLM_2730 39ba4d43f89d0abbdbac6c6f48680c34 114 SUPERFAMILY SSF49401 3 114 9.44E-19 T 23-10-2018 IPR008966 Adhesion domain superfamily DLM_2730 39ba4d43f89d0abbdbac6c6f48680c34 114 Pfam PF16970 Type-1 fimbrial protein, A 3 114 9.1E-10 T 23-10-2018 IPR039458 Type-1 fimbrial protein, A DLM_2421 2a5d2d25715415a06d20ebf6c350ba88 374 Pfam PF01610 Transposase 251 370 1.3E-9 T 23-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DLM_2421 2a5d2d25715415a06d20ebf6c350ba88 374 Pfam PF00487 Fatty acid desaturase 2 208 8.9E-10 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 DLM_2151 e6b0ff158c11075fbe98f01572b84f49 116 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 26 111 1.7E-35 T 23-10-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit DLM_2151 e6b0ff158c11075fbe98f01572b84f49 116 Gene3D G3DSA:1.10.700.10 1 116 3.9E-44 T 23-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily DLM_2151 e6b0ff158c11075fbe98f01572b84f49 116 SUPERFAMILY SSF48076 7 115 1.83E-37 T 23-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily DLM_2352 c9cf12ff47179a091942632ecc821ebc 417 SUPERFAMILY SSF53448 37 319 8.63E-63 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_2352 c9cf12ff47179a091942632ecc821ebc 417 Pfam PF13641 Glycosyltransferase like family 2 50 272 6.5E-36 T 23-10-2018 DLM_2352 c9cf12ff47179a091942632ecc821ebc 417 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 9 412 2.0E-182 T 23-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 DLM_2352 c9cf12ff47179a091942632ecc821ebc 417 Gene3D G3DSA:3.90.550.10 43 262 4.6E-47 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_0003 ebb62072883ec629fa0131c27654c22e 141 SUPERFAMILY SSF160214 43 141 1.57E-25 T 23-10-2018 IPR035924 FlaG-like superfamily DLM_0003 ebb62072883ec629fa0131c27654c22e 141 Gene3D G3DSA:3.30.160.170 41 137 3.7E-16 T 23-10-2018 IPR035924 FlaG-like superfamily DLM_0003 ebb62072883ec629fa0131c27654c22e 141 Pfam PF03646 FlaG protein 47 138 2.4E-25 T 23-10-2018 IPR005186 FlaG protein DLM_1195 0a3dad8b2818ecb910af1b118280d7d7 581 SUPERFAMILY SSF56349 210 528 2.06E-15 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DLM_1195 0a3dad8b2818ecb910af1b118280d7d7 581 Gene3D G3DSA:1.10.443.10 357 548 4.1E-12 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DLM_2092 4b640fe847510cb26fab1f57aa9ce144 352 Pfam PF10123 Mu-like prophage I protein 45 334 2.2E-63 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_2092 4b640fe847510cb26fab1f57aa9ce144 352 PIRSF PIRSF016624 21 349 4.5E-36 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_4485 cc8bc03cb75b8646dbedbe839beca982 99 Gene3D G3DSA:3.30.750.24 12 97 3.3E-13 T 23-10-2018 IPR036513 STAS domain superfamily DLM_4485 cc8bc03cb75b8646dbedbe839beca982 99 SUPERFAMILY SSF52091 13 92 1.96E-12 T 23-10-2018 IPR036513 STAS domain superfamily DLM_4485 cc8bc03cb75b8646dbedbe839beca982 99 Pfam PF13466 STAS domain 13 89 4.6E-17 T 23-10-2018 IPR002645 STAS domain DLM_0660 7b59269abae37bdb125dca07208155d6 258 Pfam PF03116 NQR2, RnfD, RnfE family 5 126 1.1E-12 T 23-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 DLM_0660 7b59269abae37bdb125dca07208155d6 258 Pfam PF03116 NQR2, RnfD, RnfE family 141 251 2.5E-8 T 23-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 DLM_0865 938ac85a27da04193d97d44e94f2ec88 166 Pfam PF13302 Acetyltransferase (GNAT) domain 1 139 1.6E-23 T 23-10-2018 IPR000182 GNAT domain DLM_0865 938ac85a27da04193d97d44e94f2ec88 166 SUPERFAMILY SSF55729 1 145 1.51E-30 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_0865 938ac85a27da04193d97d44e94f2ec88 166 Gene3D G3DSA:3.40.630.30 1 158 5.6E-36 T 23-10-2018 DLM_2927 0ee6399aa14b4ffffd41ab5391cc3856 230 Gene3D G3DSA:3.40.30.10 1 213 1.8E-52 T 23-10-2018 DLM_2927 0ee6399aa14b4ffffd41ab5391cc3856 230 Pfam PF01323 DSBA-like thioredoxin domain 6 187 4.1E-14 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DLM_2927 0ee6399aa14b4ffffd41ab5391cc3856 230 SUPERFAMILY SSF52833 4 189 1.65E-31 T 23-10-2018 IPR036249 Thioredoxin-like superfamily DLM_1674 aee24495885c1e0297ebb97f4170f002 509 Gene3D G3DSA:3.40.50.620 6 229 6.4E-111 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DLM_1674 aee24495885c1e0297ebb97f4170f002 509 Gene3D G3DSA:1.10.10.1710 443 509 8.1E-25 T 23-10-2018 DLM_1674 aee24495885c1e0297ebb97f4170f002 509 SUPERFAMILY SSF48173 229 494 3.66E-61 T 23-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DLM_1674 aee24495885c1e0297ebb97f4170f002 509 Gene3D G3DSA:1.25.40.80 131 318 6.4E-111 T 23-10-2018 DLM_1674 aee24495885c1e0297ebb97f4170f002 509 Gene3D G3DSA:1.10.579.10 322 442 9.1E-54 T 23-10-2018 DLM_1674 aee24495885c1e0297ebb97f4170f002 509 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 221 1.4E-71 T 23-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein DLM_3029 3df06c0b582dd8f23e533f950217bbd7 465 Pfam PF13520 Amino acid permease 28 432 1.8E-65 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_3029 3df06c0b582dd8f23e533f950217bbd7 465 Gene3D G3DSA:1.20.1740.10 22 465 4.8E-127 T 23-10-2018 DLM_3029 3df06c0b582dd8f23e533f950217bbd7 465 PIRSF PIRSF006060 5 464 5.1E-96 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_1755 4f5acd90422afe0671ee76196cdd2e67 438 SUPERFAMILY SSF103473 10 420 9.16E-26 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1755 4f5acd90422afe0671ee76196cdd2e67 438 Pfam PF07690 Major Facilitator Superfamily 17 382 2.3E-16 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1755 4f5acd90422afe0671ee76196cdd2e67 438 Gene3D G3DSA:1.20.1250.20 9 416 7.6E-26 T 23-10-2018 DLM_0869 9672805734233aa0700a4588bf414b5c 359 Pfam PF04245 37-kD nucleoid-associated bacterial protein 41 353 6.2E-21 T 23-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DLM_2976 6416b4de7b9227d94fd6e332fbb3da73 871 Pfam PF05567 Neisseria PilC beta-propeller domain 328 628 1.0E-47 T 23-10-2018 IPR008707 PilC beta-propeller domain DLM_1115 ca1d55c1ccec93877233e0fd4f8863c7 235 Pfam PF07722 Peptidase C26 20 211 9.0E-55 T 23-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 DLM_1115 ca1d55c1ccec93877233e0fd4f8863c7 235 SUPERFAMILY SSF52317 19 231 1.31E-36 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_1115 ca1d55c1ccec93877233e0fd4f8863c7 235 Gene3D G3DSA:3.40.50.880 1 235 1.8E-66 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like DLM_3986 f17de77453bd687bd05428ef52ab8cad 374 Pfam PF12679 ABC-2 family transporter protein 10 366 7.4E-44 T 23-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DLM_2423 4c4c011340c9e1c04a52c2a6e064432e 66 Gene3D G3DSA:1.10.10.1100 1 57 4.0E-22 T 23-10-2018 DLM_2423 4c4c011340c9e1c04a52c2a6e064432e 66 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 42 3.8E-9 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DLM_1020 180021160682f06e08467a61878892af 96 Gene3D G3DSA:3.30.70.100 1 94 1.0E-25 T 23-10-2018 DLM_1020 180021160682f06e08467a61878892af 96 SUPERFAMILY SSF54909 3 90 4.74E-24 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel DLM_1020 180021160682f06e08467a61878892af 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 78 9.6E-18 T 23-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DLM_1133 b04df7fe6e9c8e9148362f4ca75069a3 230 SMART SM00646 83 222 1.6E-4 T 23-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DLM_1133 b04df7fe6e9c8e9148362f4ca75069a3 230 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 27 220 4.5E-26 T 23-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DLM_1133 b04df7fe6e9c8e9148362f4ca75069a3 230 Gene3D G3DSA:3.40.630.40 24 227 3.0E-25 T 23-10-2018 DLM_1133 b04df7fe6e9c8e9148362f4ca75069a3 230 SUPERFAMILY SSF53187 27 223 1.66E-21 T 23-10-2018 DLM_3624 4bae57f4253367cfbd652481fccc9049 387 Gene3D G3DSA:1.10.3210.10 8 306 2.4E-22 T 23-10-2018 DLM_3624 4bae57f4253367cfbd652481fccc9049 387 SUPERFAMILY SSF109604 154 290 5.58E-10 T 23-10-2018 DLM_3624 4bae57f4253367cfbd652481fccc9049 387 Pfam PF13487 HD domain 200 259 2.1E-10 T 23-10-2018 DLM_0639 42d8994834b22bd377207cac578e8a06 218 Pfam PF03458 UPF0126 domain 104 176 4.7E-21 T 23-10-2018 IPR005115 Uncharacterised domain UPF0126 DLM_0639 42d8994834b22bd377207cac578e8a06 218 Pfam PF03458 UPF0126 domain 16 83 5.1E-18 T 23-10-2018 IPR005115 Uncharacterised domain UPF0126 DLM_2758 0832420948967ae8cc36267500bc8681 71 Pfam PF11278 Protein of unknown function (DUF3079) 1 51 3.0E-34 T 23-10-2018 IPR021430 Protein of unknown function DUF3079 DLM_2121 34f886bed1ff55a56946d17900c820ec 369 Pfam PF03929 PepSY-associated TM region 8 345 5.5E-44 T 23-10-2018 IPR005625 PepSY-associated TM protein DLM_2627 1c369ed1fdd2ddf54270ab5308f1f0f6 135 Pfam PF05593 RHS Repeat 47 81 5.4E-7 T 23-10-2018 IPR031325 RHS repeat DLM_2627 1c369ed1fdd2ddf54270ab5308f1f0f6 135 Gene3D G3DSA:3.90.930.1 18 133 2.9E-7 T 23-10-2018 DLM_2627 1c369ed1fdd2ddf54270ab5308f1f0f6 135 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 70 109 2.9E-7 T 23-10-2018 IPR006530 YD repeat DLM_2627 1c369ed1fdd2ddf54270ab5308f1f0f6 135 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 64 85 1.1E-4 T 23-10-2018 IPR006530 YD repeat DLM_2627 1c369ed1fdd2ddf54270ab5308f1f0f6 135 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 27 61 0.0018 T 23-10-2018 IPR006530 YD repeat DLM_1611 85bf2fd8abc704b3d8c16915d9fe86ac 349 Pfam PF04393 Protein of unknown function (DUF535) 23 293 4.1E-68 T 23-10-2018 IPR007488 Protein of unknown function DUF535 DLM_3520 784e5bffe3e33a253f4b26b16b97e445 689 Pfam PF01757 Acyltransferase family 8 340 3.1E-21 T 23-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DLM_3520 784e5bffe3e33a253f4b26b16b97e445 689 SUPERFAMILY SSF52266 431 678 4.35E-5 T 23-10-2018 DLM_4348 1badc0861864a704405367091f130ca1 787 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 28 762 18.893 T 23-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 DLM_4348 1badc0861864a704405367091f130ca1 787 Pfam PF03968 OstA-like protein 63 211 7.8E-6 T 23-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DLM_4348 1badc0861864a704405367091f130ca1 787 Pfam PF04453 Organic solvent tolerance protein 317 697 3.0E-99 T 23-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 DLM_2542 cfb699cff052b20e8600285a0b12f0c9 265 Gene3D G3DSA:3.40.50.1820 2 258 2.4E-40 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2542 cfb699cff052b20e8600285a0b12f0c9 265 Pfam PF12697 Alpha/beta hydrolase family 18 251 2.2E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2542 cfb699cff052b20e8600285a0b12f0c9 265 SUPERFAMILY SSF53474 5 257 8.52E-27 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_0171 9f2a393bcf1ffe736c11d79c6dea86d3 123 Gene3D G3DSA:3.30.2020.30 5 103 1.3E-28 T 23-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 DLM_0171 9f2a393bcf1ffe736c11d79c6dea86d3 123 Pfam PF06155 Protein of unknown function (DUF971) 14 98 5.0E-30 T 23-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 DLM_1531 5d229fa35fa4cdd8d0648c09ce27f582 484 Pfam PF13520 Amino acid permease 39 445 1.9E-32 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_1531 5d229fa35fa4cdd8d0648c09ce27f582 484 Gene3D G3DSA:1.20.1740.10 26 473 5.5E-46 T 23-10-2018 DLM_1531 5d229fa35fa4cdd8d0648c09ce27f582 484 PIRSF PIRSF006060 4 484 2.8E-62 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DLM_4239 26a3097146cb345f0fd47a88f516ff7b 128 Pfam PF09345 Domain of unknown function (DUF1987) 6 124 1.7E-43 T 23-10-2018 IPR018530 Domain of unknown function DUF1987 DLM_0341 89d6bccdaa1f410a50e518dc42756efb 645 Pfam PF06527 TniQ 6 128 4.6E-13 T 23-10-2018 IPR009492 TniQ DLM_0717 a9a889af711dd517745f6324b38d2e0b 437 SUPERFAMILY SSF53300 264 363 1.46E-5 T 23-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DLM_0717 a9a889af711dd517745f6324b38d2e0b 437 Pfam PF04285 Protein of unknown function (DUF444) 16 432 2.4E-186 T 23-10-2018 IPR006698 Uncharacterised protein family UPF0229 DLM_0717 a9a889af711dd517745f6324b38d2e0b 437 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 13 434 38.67 T 23-10-2018 IPR006698 Uncharacterised protein family UPF0229 DLM_2096 61eef053548871bcc5a3490043dad2ed 543 PIRSF PIRSF007056 16 535 1.5E-236 T 23-10-2018 IPR012036 Bacteriophage Mu, Gp28 DLM_2096 61eef053548871bcc5a3490043dad2ed 543 Gene3D G3DSA:3.40.50.300 42 230 6.4E-31 T 23-10-2018 DLM_2991 a0cfc6c974ac6183894a2acd4454e005 84 Pfam PF10048 Predicted integral membrane protein (DUF2282) 31 81 2.5E-23 T 23-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane DLM_4262 e673d5cbbec70a98678d7449bc94cc85 188 PRINTS PR01008 Flagellar L-ring protein signature 127 143 8.5E-13 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_4262 e673d5cbbec70a98678d7449bc94cc85 188 PRINTS PR01008 Flagellar L-ring protein signature 27 39 8.5E-13 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_4262 e673d5cbbec70a98678d7449bc94cc85 188 PRINTS PR01008 Flagellar L-ring protein signature 101 116 8.5E-13 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_4262 e673d5cbbec70a98678d7449bc94cc85 188 PRINTS PR01008 Flagellar L-ring protein signature 148 162 8.5E-13 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_4262 e673d5cbbec70a98678d7449bc94cc85 188 Pfam PF02107 Flagellar L-ring protein 6 182 2.5E-40 T 23-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DLM_4479 89d242e6e8aa6bac810d70831d655b22 251 PIRSF PIRSF006648 1 248 1.3E-19 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_4479 89d242e6e8aa6bac810d70831d655b22 251 Pfam PF01061 ABC-2 type transporter 4 214 2.7E-33 T 23-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DLM_4479 89d242e6e8aa6bac810d70831d655b22 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 190 3.0E-7 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_4479 89d242e6e8aa6bac810d70831d655b22 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 53 75 3.0E-7 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DLM_2644 de18e965da04f0dfb51192e57a60e092 448 SUPERFAMILY SSF110296 125 438 1.96E-18 T 23-10-2018 DLM_2644 de18e965da04f0dfb51192e57a60e092 448 Gene3D G3DSA:2.130.10.10 158 290 2.2E-8 T 23-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DLM_2095 498c39e6aebeaecb2817226e24049bca 518 Pfam PF06074 Protein of unknown function (DUF935) 6 513 1.2E-164 T 23-10-2018 IPR009279 Protein of unknown function DUF935 DLM_1235 d2095e24aa04f62ed352b9df1e823d06 204 Pfam PF13646 HEAT repeats 23 103 7.5E-8 T 23-10-2018 DLM_1235 d2095e24aa04f62ed352b9df1e823d06 204 Pfam PF13646 HEAT repeats 111 193 3.5E-11 T 23-10-2018 DLM_1235 d2095e24aa04f62ed352b9df1e823d06 204 SUPERFAMILY SSF48371 15 183 2.07E-18 T 23-10-2018 IPR016024 Armadillo-type fold DLM_1235 d2095e24aa04f62ed352b9df1e823d06 204 Gene3D G3DSA:1.25.10.10 5 199 3.9E-23 T 23-10-2018 IPR011989 Armadillo-like helical DLM_3047 b77ab3902f8afb9596169d14ede9a015 207 Pfam PF01810 LysE type translocator 16 198 6.5E-23 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_1159 6c76841925adb5ebc459b9d2d9240674 272 PIRSF PIRSF012318 1 271 1.1E-96 T 23-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 DLM_1159 6c76841925adb5ebc459b9d2d9240674 272 SUPERFAMILY SSF47240 79 229 2.42E-19 T 23-10-2018 IPR009078 Ferritin-like superfamily DLM_1159 6c76841925adb5ebc459b9d2d9240674 272 Pfam PF04305 Protein of unknown function (DUF455) 18 260 1.3E-93 T 23-10-2018 IPR007402 Protein of unknown function DUF455 DLM_1793 ccc7c6f782496ae4fbb0ca8412ff5104 493 Pfam PF02646 RmuC family 176 476 9.3E-101 T 23-10-2018 IPR003798 DNA recombination RmuC DLM_0240 012ac799cf65bff127ea274d149ef2d0 207 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 187 7.7E-35 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DLM_3583 329de7cfa519202452e27774bf9d3a1f 334 Gene3D G3DSA:3.30.420.310 86 326 4.9E-39 T 23-10-2018 DLM_3583 329de7cfa519202452e27774bf9d3a1f 334 Pfam PF05035 2-keto-3-deoxy-galactonokinase 7 294 5.2E-44 T 23-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 DLM_3583 329de7cfa519202452e27774bf9d3a1f 334 SUPERFAMILY SSF53067 1 286 1.29E-5 T 23-10-2018 DLM_1237 1dd7d6e5ff90a163c12c078f7a6f2e44 123 SMART SM00448 2 115 8.1E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1237 1dd7d6e5ff90a163c12c078f7a6f2e44 123 SUPERFAMILY SSF52172 1 120 7.68E-34 T 23-10-2018 IPR011006 CheY-like superfamily DLM_1237 1dd7d6e5ff90a163c12c078f7a6f2e44 123 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DLM_1237 1dd7d6e5ff90a163c12c078f7a6f2e44 123 Gene3D G3DSA:3.40.50.12740 1 121 7.9E-35 T 23-10-2018 DLM_4334 c4f78d4a99e2704990ebb8ba8d466d47 201 Pfam PF13511 Domain of unknown function (DUF4124) 10 61 3.4E-10 T 23-10-2018 IPR025392 Domain of unknown function DUF4124 DLM_3530 5e6d9b001e6b47e25631736d54416737 198 Pfam PF05137 Fimbrial assembly protein (PilN) 100 176 1.6E-19 T 23-10-2018 IPR007813 Fimbrial assembly PilN DLM_4259 816d928c0d0696ba79c1d6ad8cd821ab 259 Pfam PF12395 Protein of unknown function 152 246 2.1E-17 T 23-10-2018 IPR022123 Protein of unknown function DUF3658 DLM_4259 816d928c0d0696ba79c1d6ad8cd821ab 259 Pfam PF08874 Domain of unknown function (DUF1835) 6 120 1.3E-10 T 23-10-2018 IPR014973 Protein of unknown function DUF1835 DLM_4285 87354b9015054ff497f5a419583d12b8 257 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 131 215 3.4E-9 T 23-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DLM_4285 87354b9015054ff497f5a419583d12b8 257 SUPERFAMILY SSF56214 129 236 1.34E-9 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DLM_4285 87354b9015054ff497f5a419583d12b8 257 PRINTS PR01399 Enterobactin synthetase component D signature 66 86 5.5E-14 T 23-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DLM_4285 87354b9015054ff497f5a419583d12b8 257 PRINTS PR01399 Enterobactin synthetase component D signature 172 188 5.5E-14 T 23-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DLM_4285 87354b9015054ff497f5a419583d12b8 257 PRINTS PR01399 Enterobactin synthetase component D signature 96 114 5.5E-14 T 23-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 DLM_0409 bc22a920376b698642b28b2d17e3de3b 1114 SUPERFAMILY SSF52540 429 871 1.56E-14 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DLM_0409 bc22a920376b698642b28b2d17e3de3b 1114 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1110 0.0 T 23-10-2018 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type DLM_0409 bc22a920376b698642b28b2d17e3de3b 1114 Gene3D G3DSA:1.10.3210.30 90 342 8.8E-9 T 23-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily DLM_2837 fdd26970a07c0315692599e6c30356b2 201 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 2 195 1.4E-38 T 23-10-2018 IPR017732 Type IV / VI secretion system, DotU DLM_2837 fdd26970a07c0315692599e6c30356b2 201 Gene3D G3DSA:1.25.40.590 1 161 1.8E-40 T 23-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily DLM_2837 fdd26970a07c0315692599e6c30356b2 201 Pfam PF09850 Type VI secretion system protein DotU 1 189 5.1E-39 T 23-10-2018 IPR017732 Type IV / VI secretion system, DotU DLM_2898 82c68db37525f904d111228bb5b0077a 245 PIRSF PIRSF002884 23 245 1.1E-77 T 23-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DLM_2898 82c68db37525f904d111228bb5b0077a 245 Gene3D G3DSA:1.10.287.500 67 200 1.9E-47 T 23-10-2018 DLM_2898 82c68db37525f904d111228bb5b0077a 245 SUPERFAMILY SSF75708 47 244 1.02E-60 T 23-10-2018 DLM_2898 82c68db37525f904d111228bb5b0077a 245 Pfam PF04344 Chemotaxis phosphatase, CheZ 49 245 2.9E-77 T 23-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DLM_1263 75b22ac63ac136b149ea2e05d5bfc12d 151 Pfam PF07030 Protein of unknown function (DUF1320) 14 137 2.9E-35 T 23-10-2018 IPR009752 Bacteriophage Mu, Gp36 DLM_2893 2ee65add509379b97a230f656be1ef2e 101 Pfam PF13466 STAS domain 15 91 6.1E-10 T 23-10-2018 IPR002645 STAS domain DLM_2893 2ee65add509379b97a230f656be1ef2e 101 SUPERFAMILY SSF52091 1 100 1.39E-21 T 23-10-2018 IPR036513 STAS domain superfamily DLM_2893 2ee65add509379b97a230f656be1ef2e 101 Gene3D G3DSA:3.30.750.24 3 101 6.5E-18 T 23-10-2018 IPR036513 STAS domain superfamily DLM_1890 1ce32d66a1b752c0b91d22a0da66221a 644 Pfam PF06527 TniQ 16 150 4.6E-15 T 23-10-2018 IPR009492 TniQ DLM_4093 6ef16e48ab592fffe80a9a59f0264020 105 Gene3D G3DSA:3.30.2310.20 1 98 6.1E-23 T 23-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DLM_4093 6ef16e48ab592fffe80a9a59f0264020 105 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 94 9.1E-14 T 23-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DLM_1716 cdc87239a2b03507c482b004e26a7aa9 221 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 7 204 2.2E-52 T 23-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 DLM_1716 cdc87239a2b03507c482b004e26a7aa9 221 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 7 204 1.0E-46 T 23-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 DLM_0421 08952b154e1b1fc6ff9463c028e802d2 92 Gene3D G3DSA:3.30.370.10 4 91 8.8E-24 T 23-10-2018 IPR035905 Barstar-like superfamily DLM_0421 08952b154e1b1fc6ff9463c028e802d2 92 SUPERFAMILY SSF52038 1 90 1.96E-21 T 23-10-2018 IPR035905 Barstar-like superfamily DLM_0421 08952b154e1b1fc6ff9463c028e802d2 92 Pfam PF01337 Barstar (barnase inhibitor) 7 83 2.1E-19 T 23-10-2018 IPR000468 Barstar (barnase inhibitor) DLM_1369 356f0f6a342874c4d5420e9a74e82c8f 366 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 45 358 1.0E-132 T 23-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC DLM_1369 356f0f6a342874c4d5420e9a74e82c8f 366 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 347 7.6E-41 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_3532 d860fa47bf85365836554649f6566ca1 173 Gene3D G3DSA:2.30.30.830 76 168 2.0E-28 T 23-10-2018 DLM_3532 d860fa47bf85365836554649f6566ca1 173 PIRSF PIRSF016481 1 171 1.0E-41 T 23-10-2018 IPR007446 Pilus assembly protein PilP DLM_3532 d860fa47bf85365836554649f6566ca1 173 Pfam PF04351 Pilus assembly protein, PilP 25 167 3.5E-47 T 23-10-2018 IPR007446 Pilus assembly protein PilP DLM_2105 86873f209918706eaec45875f80d1e39 151 SUPERFAMILY SSF46689 18 139 8.78E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DLM_2105 86873f209918706eaec45875f80d1e39 151 Pfam PF08765 Mor transcription activator family 42 150 3.8E-12 T 23-10-2018 IPR014875 Mor transcription activator DLM_3995 bbe11df6e5072d25d739d255af99905e 138 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 138 9.4E-46 T 23-10-2018 IPR005265 Uncharacterised protein family UPF0093 DLM_3995 bbe11df6e5072d25d739d255af99905e 138 PIRSF PIRSF004638 1 138 4.7E-49 T 23-10-2018 IPR005265 Uncharacterised protein family UPF0093 DLM_2392 314d40803624983b555cd84a53518983 378 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 4 334 8.3E-118 T 23-10-2018 IPR010148 CRISPR-associated protein, CT1975 DLM_2392 314d40803624983b555cd84a53518983 378 Pfam PF09344 CT1975-like protein 5 367 4.2E-123 T 23-10-2018 IPR010148 CRISPR-associated protein, CT1975 DLM_3377 0e6ce2ab786060563577f1f49ae8b0e8 234 SUPERFAMILY SSF53448 2 183 1.05E-19 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_3377 0e6ce2ab786060563577f1f49ae8b0e8 234 Pfam PF02348 Cytidylyltransferase 1 180 4.2E-17 T 23-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DLM_3377 0e6ce2ab786060563577f1f49ae8b0e8 234 Gene3D G3DSA:3.90.550.10 1 184 1.2E-24 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DLM_0431 3e8e6e24c408c5868c917862f14e489e 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 36.544 T 23-10-2018 IPR005583 Peroxide stress protein YaaA DLM_0431 3e8e6e24c408c5868c917862f14e489e 257 Pfam PF03883 Peroxide stress protein YaaA 1 242 1.1E-89 T 23-10-2018 IPR005583 Peroxide stress protein YaaA DLM_1895 09f7088c7641c21657708afd6340a4f8 83 SUPERFAMILY SSF89447 2 71 5.06E-10 T 23-10-2018 IPR037914 SpoVT-AbrB domain superfamily DLM_2532 d3cf654e124611f92c6ea86d5b540694 207 Pfam PF13761 Domain of unknown function (DUF4166) 16 186 1.2E-27 T 23-10-2018 IPR025311 Domain of unknown function DUF4166 DLM_1500 d11d5480493f25e25a80f6190e73cdac 379 PIRSF PIRSF000267 2 378 9.2E-121 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DLM_1500 d11d5480493f25e25a80f6190e73cdac 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.6E-154 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DLM_1500 d11d5480493f25e25a80f6190e73cdac 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 1.7E-108 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DLM_1601 c038353026c30a6a6bc3c7b474db6f0e 93 Pfam PF12587 Protein of unknown function (DUF3761) 8 92 2.8E-39 T 23-10-2018 IPR022236 Protein of unknown function DUF3761 DLM_3919 e37c31c997d0c1ebc8b008690f9ae3a2 190 Pfam PF06821 Serine hydrolase 10 175 7.5E-64 T 23-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 DLM_3919 e37c31c997d0c1ebc8b008690f9ae3a2 190 SUPERFAMILY SSF53474 10 173 1.06E-34 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_3919 e37c31c997d0c1ebc8b008690f9ae3a2 190 Gene3D G3DSA:3.40.50.1820 1 184 2.6E-52 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_1515 06be96e9c3fe203dcb2d9775cb7cfa0c 270 SUPERFAMILY SSF53850 33 269 1.58E-70 T 23-10-2018 DLM_1515 06be96e9c3fe203dcb2d9775cb7cfa0c 270 Gene3D G3DSA:3.40.190.10 33 250 2.2E-74 T 23-10-2018 DLM_1515 06be96e9c3fe203dcb2d9775cb7cfa0c 270 Gene3D G3DSA:3.40.190.10 113 218 2.2E-74 T 23-10-2018 DLM_1515 06be96e9c3fe203dcb2d9775cb7cfa0c 270 Pfam PF03180 NLPA lipoprotein 33 269 2.4E-74 T 23-10-2018 IPR004872 Lipoprotein NlpA family DLM_0273 d18e1b35ac9330d19ee0a3dd6ce45b95 188 Pfam PF14235 Domain of unknown function (DUF4337) 27 186 2.1E-35 T 23-10-2018 IPR025570 Protein of unknown function DUF4337 DLM_3383 8203a3111209e52ac82c28e09a6cdbc9 68 Gene3D G3DSA:3.90.25.10 1 65 3.6E-16 T 23-10-2018 DLM_3383 8203a3111209e52ac82c28e09a6cdbc9 68 SUPERFAMILY SSF51735 2 64 3.78E-11 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2807 ba8c38d296653230ff8e533b69d64cee 97 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 79 2.8E-16 T 23-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 DLM_3270 bfb6e323390bcd8e34d3cb96066ea9ed 73 Gene3D G3DSA:2.30.30.110 1 73 2.0E-11 T 23-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor DLM_3270 bfb6e323390bcd8e34d3cb96066ea9ed 73 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 71 9.5E-10 T 23-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 DLM_3270 bfb6e323390bcd8e34d3cb96066ea9ed 73 SUPERFAMILY SSF50118 2 71 3.76E-14 T 23-10-2018 DLM_2844 fd9ba235b04f0ff1f4296ac45bea8501 217 Pfam PF11745 Protein of unknown function (DUF3304) 106 186 9.7E-20 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_1387 682d989d1ddb3094469177b7e3bc8b62 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 286 5.3E-47 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_0827 32e83729f6eb8570a4cc5901259b8b9d 97 Pfam PF02583 Metal-sensitive transcriptional repressor 8 93 5.1E-23 T 23-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 DLM_0827 32e83729f6eb8570a4cc5901259b8b9d 97 Gene3D G3DSA:1.20.58.1000 1 97 7.4E-29 T 23-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily DLM_1007 934bce05689f5930bedabc865e1019fb 404 Gene3D G3DSA:1.20.1250.20 20 393 3.1E-41 T 23-10-2018 DLM_1007 934bce05689f5930bedabc865e1019fb 404 SUPERFAMILY SSF103473 9 401 9.42E-50 T 23-10-2018 IPR036259 MFS transporter superfamily DLM_1007 934bce05689f5930bedabc865e1019fb 404 Pfam PF07690 Major Facilitator Superfamily 27 297 1.6E-20 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DLM_1378 7e56aa1cac7a24fc54e75faaaacdde14 169 Pfam PF00583 Acetyltransferase (GNAT) family 44 129 6.6E-10 T 23-10-2018 IPR000182 GNAT domain DLM_1378 7e56aa1cac7a24fc54e75faaaacdde14 169 SUPERFAMILY SSF55729 1 151 6.73E-24 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase DLM_1378 7e56aa1cac7a24fc54e75faaaacdde14 169 Gene3D G3DSA:3.40.630.30 1 157 7.3E-41 T 23-10-2018 DLM_4283 705e788a89504eec9bf5d4b536deb9aa 341 Gene3D G3DSA:3.40.50.1820 17 338 5.7E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4283 705e788a89504eec9bf5d4b536deb9aa 341 PIRSF PIRSF037442 22 324 1.1E-47 T 23-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 DLM_4283 705e788a89504eec9bf5d4b536deb9aa 341 SUPERFAMILY SSF53474 27 330 3.52E-39 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4283 705e788a89504eec9bf5d4b536deb9aa 341 Pfam PF12146 Serine aminopeptidase, S33 54 317 1.7E-60 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 DLM_3599 b6570e9eb9aae62c657ba68fe0e8a833 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 18 9.7E-4 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site DLM_0480 a8e704ce62eaaa8f24679d2e320239ac 43 Gene3D G3DSA:2.60.40.10 1 43 5.1E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold DLM_0480 a8e704ce62eaaa8f24679d2e320239ac 43 SUPERFAMILY SSF49584 1 41 3.79E-6 T 23-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DLM_0928 52f63f35a1d49f78cbde75ba8193ca11 183 Pfam PF01609 Transposase DDE domain 6 169 3.8E-19 T 23-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 DLM_2214 af3d840507abc1ed6f295c2988d7604c 329 Pfam PF03824 High-affinity nickel-transport protein 26 312 1.3E-87 T 23-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DLM_2214 af3d840507abc1ed6f295c2988d7604c 329 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 28 308 1.9E-116 T 23-10-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 DLM_3399 f519242a6cd6bfd95e1e3a971f375756 554 Pfam PF06097 Bacterial protein of unknown function (DUF945) 2 443 5.6E-44 T 23-10-2018 IPR010352 Protein of unknown function DUF945 DLM_2511 73b798075a5cd8ad86e8b000a7fadd12 124 Gene3D G3DSA:3.40.50.720 1 96 5.1E-10 T 23-10-2018 DLM_2511 73b798075a5cd8ad86e8b000a7fadd12 124 SUPERFAMILY SSF51735 1 91 5.88E-15 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily DLM_2511 73b798075a5cd8ad86e8b000a7fadd12 124 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 86 5.0E-5 T 23-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DLM_4349 118ef51ee0bbe86f97e106aa8433e7b4 343 Gene3D G3DSA:3.90.1200.10 90 333 1.1E-69 T 23-10-2018 DLM_4349 118ef51ee0bbe86f97e106aa8433e7b4 343 Pfam PF01636 Phosphotransferase enzyme family 22 248 1.1E-23 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase DLM_4349 118ef51ee0bbe86f97e106aa8433e7b4 343 SUPERFAMILY SSF56112 4 319 5.54E-52 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily DLM_4349 118ef51ee0bbe86f97e106aa8433e7b4 343 Gene3D G3DSA:3.30.200.20 1 89 1.1E-15 T 23-10-2018 DLM_0893 5cdbb732075a7a1cbd259ff918d67f75 90 SUPERFAMILY SSF47413 11 66 1.07E-6 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DLM_0893 5cdbb732075a7a1cbd259ff918d67f75 90 Gene3D G3DSA:1.10.260.40 1 73 1.0E-7 T 23-10-2018 DLM_3720 c36520a2cf3f26fb5cae5fcbb187ae0f 66 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 2.5E-16 T 23-10-2018 IPR021313 Protein of unknown function DUF2909 DLM_1271 43e2acc5b6c58c5e0c3d5a0fcf8c28e2 538 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 378 513 4.2E-34 T 23-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit DLM_1271 43e2acc5b6c58c5e0c3d5a0fcf8c28e2 538 Gene3D G3DSA:3.40.50.300 32 240 9.8E-10 T 23-10-2018 DLM_2175 8c3d1fed9098772361d8da6a4dec9a4a 290 Pfam PF05425 Copper resistance protein D 185 284 3.3E-16 T 23-10-2018 IPR008457 Copper resistance protein D GO:0016021 DLM_2677 91a954ec98967ddf08327b228398616a 221 Pfam PF08873 Domain of unknown function (DUF1834) 3 205 1.2E-70 T 23-10-2018 IPR014972 Bacteriophage Mu, Gp37 DLM_0108 769d0ebabb3f26096e87807fec9d89d6 238 Pfam PF09955 Predicted integral membrane protein (DUF2189) 45 170 1.2E-30 T 23-10-2018 IPR018692 Predicted integral membrane protein DUF2189 DLM_1487 23bb2eb9a3f397bb08009bc10cc848a6 334 SUPERFAMILY SSF53822 38 271 3.4E-20 T 23-10-2018 IPR028082 Periplasmic binding protein-like I DLM_1487 23bb2eb9a3f397bb08009bc10cc848a6 334 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 30 317 7.4E-67 T 23-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DLM_1487 23bb2eb9a3f397bb08009bc10cc848a6 334 Gene3D G3DSA:3.40.50.2300 128 319 8.3E-97 T 23-10-2018 DLM_1487 23bb2eb9a3f397bb08009bc10cc848a6 334 Gene3D G3DSA:3.40.50.2300 29 284 8.3E-97 T 23-10-2018 DLM_0981 5f88703f27512888039ec08e9b01f637 130 Pfam PF04347 Flagellar biosynthesis protein, FliO 38 118 2.8E-20 T 23-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DLM_0981 5f88703f27512888039ec08e9b01f637 130 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 26 93 1.3E-21 T 23-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DLM_3121 e0c339355f71eba78e82a36c3321e7c1 415 Pfam PF03222 Tryptophan/tyrosine permease family 28 374 1.2E-31 T 23-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DLM_3119 88ac0e6bf01489818ca05c165b929d0f 461 Pfam PF04966 Carbohydrate-selective porin, OprB family 98 459 4.6E-58 T 23-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 DLM_3119 88ac0e6bf01489818ca05c165b929d0f 461 Gene3D G3DSA:2.40.160.180 52 461 4.8E-99 T 23-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily DLM_0626 d9643e9cca0ae6ee6f5b2819d1a227c5 196 Pfam PF11354 Protein of unknown function (DUF3156) 47 190 6.6E-44 T 23-10-2018 IPR021500 Protein of unknown function DUF3156 DLM_0708 b43d1895a43466a61a7332c4c4dad573 352 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 3 350 9.1E-75 T 23-10-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 DLM_0377 31666c14bc50fb745e622e9da5adbeba 175 Pfam PF05751 FixH 13 156 1.3E-40 T 23-10-2018 IPR008620 Nitrogen fixation protein FixH DLM_0225 bf2db24f20cca4bca6b938f394ec0566 336 Pfam PF07759 Protein of unknown function (DUF1615) 18 335 1.1E-135 T 23-10-2018 IPR011673 Protein of unknown function DUF1615 DLM_0225 bf2db24f20cca4bca6b938f394ec0566 336 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 7 335 1.0E-131 T 23-10-2018 IPR011673 Protein of unknown function DUF1615 DLM_3539 33d37cb8ae421c67f3d6a3add40b2954 432 Pfam PF04932 O-Antigen ligase 193 363 4.2E-9 T 23-10-2018 IPR007016 O-antigen ligase-related DLM_0907 676afe01041a72b3923eb4d26b4a1fc6 87 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 1 63 5.4E-23 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DLM_0388 0ef98f70b5d44f1cb54eac691654a1c2 474 Pfam PF08668 HDOD domain 266 381 1.1E-7 T 23-10-2018 IPR013976 Metal-dependent hydrolase HDOD DLM_0388 0ef98f70b5d44f1cb54eac691654a1c2 474 Gene3D G3DSA:1.10.3210.10 256 423 1.1E-16 T 23-10-2018 DLM_0388 0ef98f70b5d44f1cb54eac691654a1c2 474 SUPERFAMILY SSF109604 242 461 2.01E-31 T 23-10-2018 DLM_3967 d74d89e273d1fc1142af54fa0b545cef 409 Pfam PF06224 Winged helix DNA-binding domain 37 381 2.0E-87 T 23-10-2018 IPR009351 Protein of unknown function DUF1006 DLM_2661 7c6732ecd57f6478be2d026852b3dca5 395 Pfam PF07394 Protein of unknown function (DUF1501) 36 352 1.9E-42 T 23-10-2018 IPR010869 Protein of unknown function DUF1501 DLM_3886 97a9694844851a54c31f202b0d9b7888 295 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 48 251 1.3E-55 T 23-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 DLM_3886 97a9694844851a54c31f202b0d9b7888 295 PIRSF PIRSF028477 1 285 2.9E-72 T 23-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 DLM_4550 0578d101c68d477550f3a5ade432cbe9 163 Pfam PF12158 Protein of unknown function (DUF3592) 18 150 2.0E-21 T 23-10-2018 IPR021994 Protein of unknown function DUF3592 DLM_2768 1508fad7c46c4fad450472834e2468cd 70 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 5 62 2.8E-10 T 23-10-2018 IPR018720 Domain of unknown function DUF2249 DLM_0845 5bd7ce8e8cc1dbeb1e41f355c2a5e4cd 197 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 159 2.8E-26 T 23-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DLM_2686 2bfda7d78613dcf26c5aefcf33eedcd1 534 Pfam PF06074 Protein of unknown function (DUF935) 3 531 5.4E-205 T 23-10-2018 IPR009279 Protein of unknown function DUF935 DLM_0971 4d3764322c1a70d3b870caec5de62e31 265 Pfam PF02108 Flagellar assembly protein FliH 127 249 1.3E-28 T 23-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DLM_0997 2e5ebbcd8f728877396ea703fd93a9ce 293 Gene3D G3DSA:3.30.2010.10 70 162 2.1E-33 T 23-10-2018 DLM_0997 2e5ebbcd8f728877396ea703fd93a9ce 293 Pfam PF01435 Peptidase family M48 80 291 2.9E-40 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DLM_0997 2e5ebbcd8f728877396ea703fd93a9ce 293 Hamap MF_00188 Protease HtpX [htpX]. 1 292 25.231 T 23-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DLM_0978 b34a2c9c4737caadbf5e37fa48096ead 175 Pfam PF03748 Flagellar basal body-associated protein FliL 78 173 2.4E-25 T 23-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 DLM_2793 d3661ebf2a780fb64535c25ac804f875 1120 Pfam PF05359 Domain of Unknown Function (DUF748) 727 865 1.4E-29 T 23-10-2018 IPR008023 Protein of unknown function DUF748 DLM_2793 d3661ebf2a780fb64535c25ac804f875 1120 Pfam PF05359 Domain of Unknown Function (DUF748) 166 306 1.4E-21 T 23-10-2018 IPR008023 Protein of unknown function DUF748 DLM_2793 d3661ebf2a780fb64535c25ac804f875 1120 Pfam PF05359 Domain of Unknown Function (DUF748) 523 660 4.7E-19 T 23-10-2018 IPR008023 Protein of unknown function DUF748 DLM_1579 c5745be548ee96897c6a6be60552a53d 345 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 330 4.0E-95 T 23-10-2018 IPR010732 Type VI secretion, TssG-like DLM_1579 c5745be548ee96897c6a6be60552a53d 345 Pfam PF06996 Type VI secretion, TssG 20 330 4.6E-93 T 23-10-2018 IPR010732 Type VI secretion, TssG-like DLM_4289 fc9a40b09e534c6efcab7fed8e8dec43 162 Pfam PF01152 Bacterial-like globin 15 113 6.5E-12 T 23-10-2018 IPR001486 Truncated hemoglobin GO:0019825 DLM_4289 fc9a40b09e534c6efcab7fed8e8dec43 162 Gene3D G3DSA:1.10.490.10 12 136 6.3E-26 T 23-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DLM_4289 fc9a40b09e534c6efcab7fed8e8dec43 162 SUPERFAMILY SSF46458 14 126 1.42E-21 T 23-10-2018 IPR009050 Globin-like superfamily DLM_1832 e1195c2c539db8aa46961f81e9daabb5 186 Pfam PF04891 NifQ 30 177 2.6E-33 T 23-10-2018 IPR006975 NifQ GO:0009399|GO:0030151 DLM_4180 da429b4b66f31315618854d805135f4e 167 Pfam PF04093 rod shape-determining protein MreD 18 158 1.8E-18 T 23-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DLM_4180 da429b4b66f31315618854d805135f4e 167 PIRSF PIRSF018472 6 167 8.6E-52 T 23-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type DLM_4180 da429b4b66f31315618854d805135f4e 167 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 15 159 3.6E-34 T 23-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DLM_3171 803e2561b866ae672ed0fd70f7f323ce 214 Pfam PF11769 Protein of unknown function (DUF3313) 25 200 1.3E-31 T 23-10-2018 IPR021747 Protein of unknown function DUF3313 DLM_3722 afd995b5ba78a1f74d4b08af19024611 58 Pfam PF11174 Protein of unknown function (DUF2970) 4 56 2.2E-14 T 23-10-2018 IPR021344 Protein of unknown function DUF2970 DLM_0877 307d8d07a87545176cf41b9e7f2e009b 517 Pfam PF06074 Protein of unknown function (DUF935) 6 512 1.2E-165 T 23-10-2018 IPR009279 Protein of unknown function DUF935 DLM_1088 9f088955c7b02a70c37a12e9a173e7f0 229 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 221 2.0E-38 T 23-10-2018 IPR006214 Bax inhibitor 1-related DLM_0281 b8dad119c361e9ee5e5d7eebf8366237 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 250 8.3E-11 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DLM_0281 b8dad119c361e9ee5e5d7eebf8366237 263 Gene3D G3DSA:1.10.3720.10 5 259 5.3E-36 T 23-10-2018 IPR035906 MetI-like superfamily DLM_0281 b8dad119c361e9ee5e5d7eebf8366237 263 SUPERFAMILY SSF161098 4 252 3.36E-35 T 23-10-2018 IPR035906 MetI-like superfamily DLM_2172 5977f967ab02fc2d7b466ca22a7fcf82 344 SUPERFAMILY SSF81345 14 339 4.84E-75 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_2172 5977f967ab02fc2d7b466ca22a7fcf82 344 Gene3D G3DSA:1.10.3470.10 16 343 1.0E-94 T 23-10-2018 IPR037294 ABC transporter, BtuC-like DLM_2172 5977f967ab02fc2d7b466ca22a7fcf82 344 Pfam PF01032 FecCD transport family 32 339 1.8E-84 T 23-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DLM_0873 aad85f9a794a047c46cbc900791dc8dc 293 PIRSF PIRSF016624 2 290 9.5E-29 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_0873 aad85f9a794a047c46cbc900791dc8dc 293 Pfam PF10123 Mu-like prophage I protein 2 275 1.2E-59 T 23-10-2018 IPR012106 Protease, Mu phage/prophage I type DLM_3683 e68b4d3a08a5a75ac9361665b9833fd9 114 Pfam PF07363 Protein of unknown function (DUF1484) 14 113 1.2E-6 T 23-10-2018 IPR009957 Protein of unknown function DUF1484 DLM_4115 5ad012307f0f67e115d2f0b375b3a5bc 374 Pfam PF04116 Fatty acid hydroxylase superfamily 83 216 4.1E-29 T 23-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 DLM_3938 325968a4f9566735e5d90950a3215703 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 110 2.0E-18 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DLM_3938 325968a4f9566735e5d90950a3215703 131 SUPERFAMILY SSF51316 2 130 3.98E-37 T 23-10-2018 IPR011057 Mss4-like superfamily DLM_3938 325968a4f9566735e5d90950a3215703 131 Gene3D G3DSA:2.170.150.70 1 114 3.0E-17 T 23-10-2018 DLM_2868 2026e815cfbdef45453b62ad1dd5d9cc 315 ProSitePatterns PS00018 EF-hand calcium-binding domain. 228 240 - T 23-10-2018 IPR018247 EF-Hand 1, calcium-binding site DLM_4176 74cdeb457f7fb03b604a56e1a5532450 246 Pfam PF03591 AzlC protein 28 169 5.1E-39 T 23-10-2018 IPR011606 Branched-chain amino acid transport, permease DLM_4208 d0b86a6fe4118ae400ddca00d81ba014 173 Pfam PF08750 CNP1-like family 38 168 5.4E-38 T 23-10-2018 IPR014861 Uncharacterised domain CNP1 DLM_4244 ff185dc2f5c49bbf66e4ba0b8c36e4bb 434 Pfam PF11902 Protein of unknown function (DUF3422) 6 426 3.1E-151 T 23-10-2018 IPR021830 Protein of unknown function DUF3422 DLM_2917 a57a7b07daacff20060d5a0fceeb0fa4 130 Pfam PF05957 Bacterial protein of unknown function (DUF883) 37 130 6.3E-31 T 23-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 DLM_0007 7848253715686f6a7988a159216be125 118 Pfam PF02796 Helix-turn-helix domain of resolvase 74 103 6.1E-6 T 23-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 DLM_0007 7848253715686f6a7988a159216be125 118 Pfam PF10975 Protein of unknown function (DUF2802) 46 113 2.9E-19 T 23-10-2018 IPR021244 Protein of unknown function DUF2802 DLM_0789 dc1f1a0ae2ee705bf38a41537dddf1a6 143 Pfam PF07030 Protein of unknown function (DUF1320) 7 126 8.7E-35 T 23-10-2018 IPR009752 Bacteriophage Mu, Gp36 DLM_4487 c0b99cfa3444a19042fa1ec4f569c19f 161 Pfam PF02470 MlaD protein 38 115 4.1E-21 T 23-10-2018 IPR003399 Mce/MlaD DLM_4487 c0b99cfa3444a19042fa1ec4f569c19f 161 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 146 9.6E-56 T 23-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 DLM_2277 356d4d61c7aec5a5797016a7632f0c1e 480 Gene3D G3DSA:3.30.2290.10 17 237 5.2E-22 T 23-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DLM_2277 356d4d61c7aec5a5797016a7632f0c1e 480 SUPERFAMILY SSF111283 21 477 1.83E-128 T 23-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DLM_2277 356d4d61c7aec5a5797016a7632f0c1e 480 Pfam PF01523 Putative modulator of DNA gyrase 37 329 3.7E-70 T 23-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DLM_2277 356d4d61c7aec5a5797016a7632f0c1e 480 PIRSF PIRSF004919 18 479 5.0E-131 T 23-10-2018 IPR025502 TldD DLM_3089 d852415097ab2848ca459dee28d02f2b 118 Pfam PF03788 LrgA family 12 104 1.8E-23 T 23-10-2018 IPR005538 LrgA/CidA family GO:0016021 DLM_0110 2dc0ca3a21ee10eba83f60f8050d0947 159 Pfam PF08897 Domain of unknown function (DUF1841) 6 139 6.3E-58 T 23-10-2018 IPR014993 Protein of unknown function DUF1841 DLM_1489 e20b5bd6ac93047602de541bd570b2df 368 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 345 4.4E-36 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_4447 675191518fca2e36b404de6e9051a072 178 Pfam PF14235 Domain of unknown function (DUF4337) 11 174 2.4E-50 T 23-10-2018 IPR025570 Protein of unknown function DUF4337 DLM_3158 74553f3d8c87eac5254ac4d9b915425f 114 Pfam PF04076 Bacterial OB fold (BOF) protein 25 111 4.9E-25 T 23-10-2018 IPR005220 Bacterial OB-fold DLM_3158 74553f3d8c87eac5254ac4d9b915425f 114 Gene3D G3DSA:2.40.50.200 14 114 3.2E-29 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily DLM_3158 74553f3d8c87eac5254ac4d9b915425f 114 SUPERFAMILY SSF101756 12 113 9.29E-27 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily DLM_3726 1a4be93f356fc88a9e41463fd03a73bb 397 Pfam PF01966 HD domain 106 225 4.7E-11 T 23-10-2018 IPR006674 HD domain DLM_3726 1a4be93f356fc88a9e41463fd03a73bb 397 Gene3D G3DSA:1.10.3210.10 59 267 1.8E-25 T 23-10-2018 DLM_3726 1a4be93f356fc88a9e41463fd03a73bb 397 SUPERFAMILY SSF109604 101 233 2.24E-17 T 23-10-2018 DLM_1026 fcbea1ecff6c8323945368b028f48fdf 330 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 102 303 2.5E-25 T 23-10-2018 IPR005079 Peptidase C45 DLM_1026 fcbea1ecff6c8323945368b028f48fdf 330 Gene3D G3DSA:3.60.60.10 83 310 9.9E-19 T 23-10-2018 DLM_1656 b359120073cd28c05685e2af2399d1a1 195 Pfam PF01169 Uncharacterized protein family UPF0016 106 180 1.8E-22 T 23-10-2018 IPR001727 Gdt1 family DLM_1656 b359120073cd28c05685e2af2399d1a1 195 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.1E-19 T 23-10-2018 IPR001727 Gdt1 family DLM_3920 e8392b31c1186c7f853b44641d8d8514 179 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 106 155 1.9E-14 T 23-10-2018 IPR018637 Domain of unknown function DUF2059 DLM_2996 6ce9829efb3701977250a9bf390ad526 170 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 51 167 7.3E-7 T 23-10-2018 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain DLM_2256 eadaeab14a1e8e014666d04d024c047b 184 Pfam PF07209 Protein of unknown function (DUF1415) 9 177 4.4E-69 T 23-10-2018 IPR009858 Protein of unknown function DUF1415 DLM_3820 902a119ade21eecea843d48a9bd52fe4 147 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 1 96 7.5E-23 T 23-10-2018 IPR013362 Pilus modification type IV, PilV DLM_1681 e18766a623a8b00858629b60ed359cd7 262 Pfam PF07103 Protein of unknown function (DUF1365) 11 248 4.5E-69 T 23-10-2018 IPR010775 Protein of unknown function DUF1365 DLM_4209 578548507334fc06889c262bc87306e6 259 Pfam PF05742 Transport and Golgi organisation 2 1 232 9.4E-50 T 23-10-2018 IPR008551 Transport and Golgi organisation protein 2 DLM_4121 96045fbbc8dbf34f4f611ea49452a755 340 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 20 334 3.3E-59 T 23-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX DLM_4177 e799e2be7e7388baa6d5f054d399a8f8 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 4 100 2.2E-25 T 23-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DLM_2144 39691bcff5f055c01fe61b9f2aa86f2b 220 Pfam PF11745 Protein of unknown function (DUF3304) 1 108 6.1E-15 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_0707 9c11a2120fff19a9ef1cd25ffaa851be 299 SUPERFAMILY SSF51556 2 297 2.72E-44 T 23-10-2018 IPR032466 Metal-dependent hydrolase DLM_0707 9c11a2120fff19a9ef1cd25ffaa851be 299 Pfam PF04909 Amidohydrolase 4 297 7.3E-34 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DLM_0707 9c11a2120fff19a9ef1cd25ffaa851be 299 Gene3D G3DSA:3.20.20.140 1 299 4.6E-74 T 23-10-2018 DLM_2923 ff02a14e6049aa023a25459d2a96d9ee 138 Pfam PF11026 Protein of unknown function (DUF2721) 8 124 5.6E-32 T 23-10-2018 IPR021279 Protein of unknown function DUF2721 DLM_2486 40794117b7be53533ed29010e047abc9 212 Pfam PF04403 Paraquat-inducible protein A 54 205 1.5E-47 T 23-10-2018 IPR007498 Intermembrane transport protein PqiA-like DLM_0917 66a72c954b7a2f11900d95716f46dd24 46 Gene3D G3DSA:1.10.760.10 1 44 4.3E-5 T 23-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DLM_2009 38c86a27c5432dcde9abfbf11dad7254 384 Pfam PF12698 ABC-2 family transporter protein 24 375 6.3E-45 T 23-10-2018 DLM_2843 63bfa5fc2bae8bd6e47819148d699078 200 Pfam PF11745 Protein of unknown function (DUF3304) 82 169 8.9E-20 T 23-10-2018 IPR021733 Protein of unknown function DUF3304 DLM_2767 5bc753fde5718a7ce0f0bd7ead1e8ff3 142 Pfam PF01814 Hemerythrin HHE cation binding domain 3 125 2.1E-22 T 23-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DLM_2767 5bc753fde5718a7ce0f0bd7ead1e8ff3 142 Gene3D G3DSA:1.20.120.520 2 138 1.0E-24 T 23-10-2018 DLM_0713 b62cf12b015bfdcd33931cb5615b0cec 182 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 173 2.7E-38 T 23-10-2018 IPR018639 Domain of unknown function DUF2062 DLM_1113 051f7fcf2d7466b74c72f0f66b3d49e9 212 PIRSF PIRSF006324 3 210 1.8E-59 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_1113 051f7fcf2d7466b74c72f0f66b3d49e9 212 Pfam PF01810 LysE type translocator 18 208 7.3E-41 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_1689 c613c3107362db5e23a19d48622a0282 795 Hamap MF_01871 UPF0753 protein . 7 781 20.042 T 23-10-2018 IPR018752 Uncharacterised protein family UPF0753 DLM_1689 c613c3107362db5e23a19d48622a0282 795 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 14 768 4.6E-200 T 23-10-2018 IPR018752 Uncharacterised protein family UPF0753 DLM_2479 fc5899406bbddea8b6461c4bf9ac94cf 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 2.9E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2479 fc5899406bbddea8b6461c4bf9ac94cf 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 252 266 2.9E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2479 fc5899406bbddea8b6461c4bf9ac94cf 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 101 2.9E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2479 fc5899406bbddea8b6461c4bf9ac94cf 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 2.9E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2479 fc5899406bbddea8b6461c4bf9ac94cf 312 Pfam PF00561 alpha/beta hydrolase fold 60 288 2.7E-20 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DLM_2479 fc5899406bbddea8b6461c4bf9ac94cf 312 Gene3D G3DSA:3.40.50.1820 35 310 8.6E-48 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_2479 fc5899406bbddea8b6461c4bf9ac94cf 312 SUPERFAMILY SSF53474 36 306 3.59E-48 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold DLM_4067 eda8a47ba2534d67955a9ada7af8ba11 62 Pfam PF11127 Protein of unknown function (DUF2892) 1 61 4.8E-24 T 23-10-2018 IPR021309 Protein of unknown function DUF2892 DLM_4457 b684b5990e18c64aae2484662e4446cc 373 Pfam PF01757 Acyltransferase family 12 342 7.8E-17 T 23-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DLM_4035 2b572f5399077d96260aa96ff6766847 209 Pfam PF01810 LysE type translocator 15 203 5.4E-38 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_4035 2b572f5399077d96260aa96ff6766847 209 PIRSF PIRSF006324 1 208 9.2E-62 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_1717 e5052f1e9fa36e65ae71efb733fd925b 253 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 2 252 4.0E-121 T 23-10-2018 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 DLM_1717 e5052f1e9fa36e65ae71efb733fd925b 253 Pfam PF03818 Malonate/sodium symporter MadM subunit 3 60 1.1E-25 T 23-10-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal DLM_1345 8b380a824e9fb1a02401542e8727f84a 349 Pfam PF03756 A-factor biosynthesis hotdog domain 22 155 1.8E-21 T 23-10-2018 IPR005509 A-factor biosynthesis hotdog domain DLM_1345 8b380a824e9fb1a02401542e8727f84a 349 Pfam PF03756 A-factor biosynthesis hotdog domain 196 323 1.0E-19 T 23-10-2018 IPR005509 A-factor biosynthesis hotdog domain DLM_1264 16ec6155dc4c3bb2da5356fc406e4d62 110 SUPERFAMILY SSF160059 21 82 1.57E-13 T 23-10-2018 DLM_0780 711f320e1b1331f002838aa6a6a7615c 189 Pfam PF11985 Protein of unknown function (DUF3486) 1 187 7.4E-44 T 23-10-2018 IPR021874 Bacteriophage Mu, Gp27 DLM_0470 15ca5f3ecda6f7268e62c476195f8023 136 Pfam PF13511 Domain of unknown function (DUF4124) 4 54 2.5E-14 T 23-10-2018 IPR025392 Domain of unknown function DUF4124 DLM_3787 74da268caff4c006861326f1014f0ebe 207 Pfam PF07987 Domain of unkown function (DUF1775) 56 198 1.5E-44 T 23-10-2018 IPR012533 YcnI-like DLM_3787 74da268caff4c006861326f1014f0ebe 207 Gene3D G3DSA:2.60.40.2230 54 207 3.2E-32 T 23-10-2018 IPR038507 YcnI-like superfamily DLM_2601 e4429a4d4c5fcb7209914572a5dba8c0 210 SUPERFAMILY SSF103196 91 150 3.92E-7 T 23-10-2018 DLM_0783 26f05eb1ed97233c0256a0b2c066ca7e 431 Pfam PF04233 Phage Mu protein F like protein 59 177 3.2E-18 T 23-10-2018 IPR006528 Phage head morphogenesis domain DLM_1505 5efde7b2cbf36b0e41b0d0d2ce17e33a 176 SUPERFAMILY SSF81342 2 161 1.1E-7 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DLM_2687 bf2ce6e7b008b2343b5d9fa299f11c99 544 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 379 515 3.5E-36 T 23-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit DLM_2687 bf2ce6e7b008b2343b5d9fa299f11c99 544 Gene3D G3DSA:3.40.50.300 31 247 1.2E-7 T 23-10-2018 DLM_2242 cccfbdbf08e24b65d4576b22dcf8ed44 67 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 9.4E-23 T 23-10-2018 IPR012451 Protein of unknown function DUF1656 DLM_1571 f0254e93b55ffae4e6fbe0a74c2405bc 510 Pfam PF11336 Protein of unknown function (DUF3138) 1 510 1.4E-194 T 23-10-2018 IPR021485 Protein of unknown function DUF3138 DLM_4304 21b82f55cc7e89fd628f6503d3a1b1c5 125 Pfam PF07784 Protein of unknown function (DUF1622) 35 111 9.9E-26 T 23-10-2018 IPR012427 Protein of unknown function DUF1622 DLM_3699 fd4ea9be7560a7593085ec23dc11cdcb 115 Pfam PF09842 Predicted membrane protein (DUF2069) 10 109 2.7E-31 T 23-10-2018 IPR018643 Protein of unknown function DUF2069, membrane DLM_1568 fa1915db31c3f40728783d5463e2b0c6 145 Pfam PF04214 Protein of unknown function, DUF 51 119 7.9E-28 T 23-10-2018 IPR007332 Protein of unknown function DUF411 DLM_2185 c79cffe60076ced7a7516b5cfb15c8e1 218 Pfam PF04972 BON domain 79 146 9.2E-14 T 23-10-2018 IPR007055 BON domain DLM_2185 c79cffe60076ced7a7516b5cfb15c8e1 218 Pfam PF04972 BON domain 4 71 8.7E-16 T 23-10-2018 IPR007055 BON domain DLM_2185 c79cffe60076ced7a7516b5cfb15c8e1 218 Pfam PF04972 BON domain 153 216 5.3E-12 T 23-10-2018 IPR007055 BON domain DLM_2185 c79cffe60076ced7a7516b5cfb15c8e1 218 SMART SM00749 155 216 0.11 T 23-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DLM_2185 c79cffe60076ced7a7516b5cfb15c8e1 218 SMART SM00749 9 72 0.15 T 23-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DLM_2243 027499951bae84cfff5a95f525c1771c 690 Pfam PF04632 Fusaric acid resistance protein family 8 672 1.5E-194 T 23-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DLM_1920 7358320f82c1283f8424852ed336ec7e 160 SUPERFAMILY SSF82784 1 152 1.28E-42 T 23-10-2018 IPR036102 OsmC/Ohr superfamily DLM_1920 7358320f82c1283f8424852ed336ec7e 160 Gene3D G3DSA:3.30.300.20 1 151 1.1E-46 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta DLM_1920 7358320f82c1283f8424852ed336ec7e 160 Pfam PF02566 OsmC-like protein 51 148 2.9E-15 T 23-10-2018 IPR003718 OsmC/Ohr family DLM_2090 72b29211c6be2153afc8a8938dedd5fc 342 Pfam PF03864 Phage major capsid protein E 14 339 5.4E-88 T 23-10-2018 IPR005564 Major capsid protein GpE DLM_2778 3eabdeb3ca9ba1cb1f0924512b2029e4 597 Pfam PF06980 Protein of unknown function (DUF1302) 36 595 8.8E-106 T 23-10-2018 IPR010727 Protein of unknown function DUF1302 DLM_1386 d85176a86e676a5eaf8e0a834299a8ed 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 294 5.5E-41 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_3719 7465ecf3b26aa6d159eed2a519466b14 188 Pfam PF02104 SURF1 family 29 173 2.0E-8 T 23-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DLM_2094 b8663c9447d67bfe0bf039b65f5820ac 431 Pfam PF04233 Phage Mu protein F like protein 59 177 4.8E-18 T 23-10-2018 IPR006528 Phage head morphogenesis domain DLM_3017 3b6026c328096971568114453349150f 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 500 1.9E-108 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DLM_3017 3b6026c328096971568114453349150f 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 56 500 4.0E-131 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DLM_2466 cf7951c91e036c48386c1336e71271ca 45 Pfam PF08085 Entericidin EcnA/B family 18 38 3.0E-11 T 23-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 DLM_2533 0caae73f32d9e9ecfa13292479b826eb 159 Pfam PF10027 Predicted integral membrane protein (DUF2269) 6 152 2.8E-57 T 23-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane DLM_2459 5246ac7b0d98cdae4029d66a79411fe6 893 Gene3D G3DSA:1.25.40.10 634 710 3.7E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DLM_1490 4ee24ec1e9193afb5f94f7e5107881c5 320 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 297 7.9E-39 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_2701 2998424058c3fae91bcd172f73407158 203 Pfam PF11363 Protein of unknown function (DUF3164) 8 201 2.5E-86 T 23-10-2018 IPR021505 Bacteriophage B3, Orf6 DLM_0879 8cf23f141d712009156808bd06460fdf 189 Pfam PF11985 Protein of unknown function (DUF3486) 1 187 6.3E-46 T 23-10-2018 IPR021874 Bacteriophage Mu, Gp27 DLM_2475 fa851b0297bc19bd44b80a0d23dc106c 115 Pfam PF03692 Putative zinc- or iron-chelating domain 9 100 6.7E-10 T 23-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DLM_3495 e6f088ada2b3133a0bf9cd8f7bb7cb52 755 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 268 386 3.0E-15 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_3495 e6f088ada2b3133a0bf9cd8f7bb7cb52 755 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 65 254 1.5E-12 T 23-10-2018 IPR018712 Domain of unknown function DUF2235 DLM_3452 765009561f6742e2169491554cfa5dfb 89 Pfam PF13670 Peptidase propeptide and YPEB domain 5 86 4.7E-29 T 23-10-2018 IPR025711 PepSY domain DLM_2781 7bcb67d2dfac24ac08534557068ffb12 276 SUPERFAMILY SSF103481 29 127 2.09E-10 T 23-10-2018 DLM_2781 7bcb67d2dfac24ac08534557068ffb12 276 Pfam PF00892 EamA-like transporter family 144 271 2.1E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_2781 7bcb67d2dfac24ac08534557068ffb12 276 Pfam PF00892 EamA-like transporter family 1 126 4.3E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DLM_2781 7bcb67d2dfac24ac08534557068ffb12 276 SUPERFAMILY SSF103481 177 273 7.98E-12 T 23-10-2018 DLM_3175 7b82c68db8095da7a150fc8cecaa3532 174 Pfam PF11161 Protein of unknown function (DUF2946) 1 172 4.1E-49 T 23-10-2018 IPR021332 Protein of unknown function DUF2944 DLM_1900 462f17695d1d21247dc78d90c2182c2e 84 Pfam PF03891 Domain of unknown function (DUF333) 34 81 4.1E-19 T 23-10-2018 IPR005590 Protein of unknown function DUF333 DLM_0116 680a519bdb8ce4c5ce608216d512cf8c 45 Pfam PF11346 Protein of unknown function (DUF3149) 5 41 8.3E-6 T 23-10-2018 IPR021494 Protein of unknown function DUF3149 DLM_2660 98e7a9ffda9811992e4d6c2e1fee772e 480 Pfam PF08811 Protein of unknown function (DUF1800) 28 444 6.5E-116 T 23-10-2018 IPR014917 Protein of unknown function DUF1800 DLM_0365 cace26aecff0b99c5f3a75674c4928d9 227 Pfam PF04172 LrgB-like family 13 224 7.8E-71 T 23-10-2018 IPR007300 CidB/LrgB family DLM_0096 3df6b1442f1aa7459d1be4fd2fbcf774 218 PIRSF PIRSF006324 1 217 3.7E-53 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_0096 3df6b1442f1aa7459d1be4fd2fbcf774 218 Pfam PF01810 LysE type translocator 15 214 2.5E-46 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DLM_3346 83a941730ad44ede9eae32063fa90473 130 Pfam PF07681 DoxX 10 91 3.2E-20 T 23-10-2018 IPR032808 DoxX family DLM_2216 6d9483cfcadef09160d5e8f317f4b186 1389 Pfam PF02514 CobN/Magnesium Chelatase 119 1362 0.0 T 23-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 DLM_4560 64d7b6604460f84f2e99b59962c46707 386 Gene3D G3DSA:3.40.50.150 192 375 5.8E-25 T 23-10-2018 DLM_4560 64d7b6604460f84f2e99b59962c46707 386 SUPERFAMILY SSF53335 30 374 1.2E-50 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DLM_3398 c1d34096ded0448763cf73ef32741238 258 Pfam PF01925 Sulfite exporter TauE/SafE 17 254 6.1E-39 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DLM_3513 64395b7665908b589e7ce08828a54eb4 394 Pfam PF11876 Protein of unknown function (DUF3396) 123 326 3.0E-53 T 23-10-2018 IPR021815 Protein of unknown function DUF3396 DLM_3283 bc47499b318272c5ae765a2d67657c7f 308 Pfam PF08907 Domain of unknown function (DUF1853) 19 285 1.6E-64 T 23-10-2018 IPR015003 Protein of unknown function DUF1853 DLM_0042 fe42354953736d8cb516bb22e8703bd2 488 Pfam PF01384 Phosphate transporter family 32 476 9.9E-90 T 23-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 DLM_4459 ecc964eadb8fcda9314d1b357c2bcb03 225 Pfam PF02397 Bacterial sugar transferase 31 222 1.1E-54 T 23-10-2018 IPR003362 Bacterial sugar transferase DLM_0364 0b0e529c8fb8b533e6f03b36c4513872 139 Pfam PF03788 LrgA family 26 119 3.6E-23 T 23-10-2018 IPR005538 LrgA/CidA family GO:0016021 DLM_0099 9aef132a689f36fc0e24e10e2d1f534f 142 Pfam PF13664 Domain of unknown function (DUF4149) 10 105 7.7E-22 T 23-10-2018 IPR025423 Domain of unknown function DUF4149 DLM_0152 5b15fefeb49f43daf22aaecdbe62251d 187 Pfam PF02417 Chromate transporter 12 168 1.5E-33 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DLM_0813 19edeae695dd476c5163e0891dd242ba 59 Pfam PF13490 Putative zinc-finger 5 39 3.1E-8 T 23-10-2018 IPR027383 Putative zinc-finger DLM_0991 158f3c9c99ce70eba508ca584f8eef19 262 SUPERFAMILY SSF74653 193 246 7.19E-5 T 23-10-2018 DLM_3674 f4b0fdc96ce5010712c1df404cf4a761 312 SMART SM00978 184 311 2.2E-21 T 23-10-2018 IPR007379 Tim44-like domain DLM_4511 063fe2242e5e8624695094d20e07e2ac 89 Pfam PF04463 Protein of unknown function (DUF523) 2 77 4.9E-21 T 23-10-2018 IPR007553 Domain of unknown function DUF523 DLM_2127 c5caabfda0af1874b0538f64f8d875f9 309 Pfam PF03547 Membrane transport protein 10 152 2.2E-13 T 23-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DLM_1550 11f60dfea20b55984e8656882575d673 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 330 1.1E-32 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DLM_4494 ef1b6181186d1ebf39ac4562ec87e08d 71 Pfam PF04102 SlyX 4 71 7.8E-26 T 23-10-2018 IPR007236 SlyX DLM_4494 ef1b6181186d1ebf39ac4562ec87e08d 71 Hamap MF_00715 Protein SlyX [slyX]. 2 71 14.934 T 23-10-2018 IPR007236 SlyX DLM_0154 ea93a4f3d8dbc565629c8c006631363a 322 Pfam PF00487 Fatty acid desaturase 24 262 1.6E-9 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 DLM_2918 fe1422cf92ca32ee6b8c61be9d3adac3 111 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 4 107 1.6E-12 T 23-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III DLM_0891 e9ff30f55224a5816485c2b4ab9a6765 209 Pfam PF11363 Protein of unknown function (DUF3164) 11 204 7.0E-87 T 23-10-2018 IPR021505 Bacteriophage B3, Orf6 DLM_2005 8aea15e6cc60c5ead69af037332fca26 289 SUPERFAMILY SSF50182 103 170 1.05E-7 T 23-10-2018 IPR010920 LSM domain superfamily DLM_2005 8aea15e6cc60c5ead69af037332fca26 289 Pfam PF00924 Mechanosensitive ion channel 63 269 1.8E-13 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DLM_1196 16812a39b827ace0715fe9793e6f5ddd 426 Pfam PF07804 HipA-like C-terminal domain 166 343 7.6E-22 T 23-10-2018 IPR012893 HipA-like, C-terminal DLM_3737 9c0478d511d5efb85bf11b7b1fe6754b 179 Pfam PF06271 RDD family 8 159 5.4E-18 T 23-10-2018 IPR010432 RDD DLM_3518 8d2040152f5109a280a4174eb2f511b7 114 Pfam PF07363 Protein of unknown function (DUF1484) 15 113 4.1E-7 T 23-10-2018 IPR009957 Protein of unknown function DUF1484 DLM_3291 68d5d2b2e9d647bf9a4af00f36cdb67a 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 1.4E-85 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DLM_1669 b9dfe8001427c63afc14523e1c963e8c 169 Pfam PF06127 Protein of unknown function (DUF962) 1 145 1.5E-21 T 23-10-2018 IPR009305 Protein of unknown function DUF962 DLM_0533 7328227fd7014de88e72f55ab4b75771 187 Pfam PF04366 Las17-binding protein actin regulator 100 183 4.3E-13 T 23-10-2018 IPR007461 Ysc84 actin-binding domain DLM_0366 9ecc0adac1e8cbadc004b7647a16ee0b 210 Pfam PF12118 SprA-related family 62 189 1.1E-27 T 23-10-2018 IPR021973 SprA-related family DLM_2263 a663766d2cd9d10d6568f9320e835945 169 Gene3D G3DSA:1.20.120.1630 13 165 1.8E-24 T 23-10-2018 DLM_3964 f4e252b989d8c5477221122a93636e38 137 Pfam PF03692 Putative zinc- or iron-chelating domain 18 111 2.4E-15 T 23-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DLM_0483 a18729896f5ae892bbb74cbbf1bcf407 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 12 330 6.2E-22 T 23-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DLM_3371 1d5313bb5d332d25bf2b652e72dbe8b0 366 Pfam PF00953 Glycosyl transferase family 4 75 232 7.4E-29 T 23-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DLM_0841 47a9e91f6b5e23132efb3829e1b47614 306 Pfam PF04393 Protein of unknown function (DUF535) 31 303 7.6E-88 T 23-10-2018 IPR007488 Protein of unknown function DUF535 DLM_1945 d37c4814aee14e613e3e0b14c30deb2c 58 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 20 51 2.6E-9 T 23-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 DLM_0077 f4263706bc466dcbfb7f10cd52d347bb 273 Pfam PF01578 Cytochrome C assembly protein 72 269 2.4E-35 T 23-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037