A9P82_00005	SM00382	ATPases associated with a variety of cellular activities
A9P82_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A9P82_00015	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_00035	SM00382	ATPases associated with a variety of cellular activities
A9P82_00045	SM00014	Acid phosphatase homologues
A9P82_00095	SM00028	Tetratricopeptide repeats
A9P82_00110	SM01234	A9P82_00110
A9P82_00180	SM00448	cheY-homologous receiver domain
A9P82_00180	SM00850	LytTr DNA-binding domain
A9P82_00195	SM00271	DnaJ molecular chaperone homology domain
A9P82_00250	SM01252	A9P82_00250
A9P82_00320	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_00350	SM00947	Carbonic anhydrase
A9P82_00370	SM00886	Stress responsive A/B Barrel Domain
A9P82_00390	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_00460	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A9P82_00485	SM00421	helix_turn_helix, Lux Regulon
A9P82_00525	SM01400	A9P82_00525
A9P82_00540	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9P82_00540	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9P82_00540	SM00493	A9P82_00540
A9P82_00565	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9P82_00595	SM00487	DEAD-like helicases superfamily
A9P82_00595	SM00490	helicase superfamily c-terminal domain
A9P82_00600	SM00830	Chorismate mutase type II
A9P82_00615	SM01133	A9P82_00615
A9P82_00650	SM00028	Tetratricopeptide repeats
A9P82_00660	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_00735	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9P82_00765	SM00382	ATPases associated with a variety of cellular activities
A9P82_00770	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A9P82_00815	SM00316	Ribosomal protein S1-like RNA-binding domain
A9P82_00815	SM00732	Likely ribonuclease with RNase H fold.
A9P82_00820	SM00465	GIY-YIG type nucleases (URI domain)
A9P82_00825	SM00387	Histidine kinase-like ATPases
A9P82_00825	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_00835	SM01321	A9P82_00835
A9P82_00945	SM00782	PhnA Zinc-Ribbon
A9P82_00965	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_00970	SM00382	ATPases associated with a variety of cellular activities
A9P82_00990	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9P82_00990	SM01134	A9P82_00990
A9P82_01000	SM00478	endonuclease III
A9P82_01015	SM00663	RNA polymerase I subunit A N-terminus
A9P82_01020	SM00935	Outer membrane protein (OmpH-like)
A9P82_01035	SM00965	Secretin and TonB N terminus short domain
A9P82_01065	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9P82_01065	SM00245	tail specific protease
A9P82_01165	SM00382	ATPases associated with a variety of cellular activities
A9P82_01205	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9P82_01205	SM00474	3'-5' exonuclease
A9P82_01205	SM00475	5'-3' exonuclease
A9P82_01205	SM00482	DNA polymerase A domain
A9P82_01305	SM00448	cheY-homologous receiver domain
A9P82_01305	SM00850	LytTr DNA-binding domain
A9P82_01370	SM01091	Transporter associated domain
A9P82_01380	SM00382	ATPases associated with a variety of cellular activities
A9P82_01410	SM00977	TilS substrate C-terminal domain
A9P82_01420	SM00919	Malic enzyme, NAD binding domain
A9P82_01420	SM01274	A9P82_01420
A9P82_01475	SM00100	Cyclic nucleotide-monophosphate binding domain
A9P82_01510	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_01520	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_01550	SM01018	B12 binding domain
A9P82_01555	SM00641	Glycosyl hydrolases family 25
A9P82_01560	SM00387	Histidine kinase-like ATPases
A9P82_01560	SM00433	TopoisomeraseII
A9P82_01625	SM00672	Putative lipopolysaccharide-modifying enzyme.
A9P82_01630	SM00382	ATPases associated with a variety of cellular activities
A9P82_01630	SM00962	SRP54-type protein, GTPase domain
A9P82_01630	SM00963	SRP54-type protein, helical bundle domain
A9P82_01650	SM00235	Zinc-dependent metalloprotease
A9P82_01675	SM00363	S4 RNA-binding domain
A9P82_01680	SM01321	A9P82_01680
A9P82_01690	SM00481	DNA polymerase alpha chain like domain
A9P82_01710	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_01730	SM00271	DnaJ molecular chaperone homology domain
A9P82_01745	SM00825	Beta-ketoacyl synthase
A9P82_01750	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_01845	SM00382	ATPases associated with a variety of cellular activities
A9P82_01890	SM00642	Alpha-amylase domain
A9P82_01900	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9P82_01990	SM01040	BRO family, N-terminal domain
A9P82_02005	SM00822	A9P82_02005
A9P82_02025	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_02030	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_02040	SM00382	ATPases associated with a variety of cellular activities
A9P82_02065	SM00421	helix_turn_helix, Lux Regulon
A9P82_02070	SM00493	A9P82_02070
A9P82_02100	SM00382	ATPases associated with a variety of cellular activities
A9P82_02190	SM00387	Histidine kinase-like ATPases
A9P82_02190	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_02195	SM00448	cheY-homologous receiver domain
A9P82_02195	SM00862	Transcriptional regulatory protein, C terminal
A9P82_02270	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9P82_02320	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9P82_02325	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9P82_02325	SM00924	MgtE intracellular N domain
A9P82_02385	SM00028	Tetratricopeptide repeats
A9P82_02430	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9P82_02430	SM00245	tail specific protease
A9P82_02540	SM00382	ATPases associated with a variety of cellular activities
A9P82_02545	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9P82_02550	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9P82_02550	SM01091	Transporter associated domain
A9P82_02560	SM00867	YceI-like domain 
A9P82_02565	SM00382	ATPases associated with a variety of cellular activities
A9P82_02565	SM00994	ClpX C4-type zinc finger
A9P82_02565	SM01086	C-terminal, D2-small domain, of ClpB protein
A9P82_02585	SM00028	Tetratricopeptide repeats
A9P82_02590	SM00421	helix_turn_helix, Lux Regulon
A9P82_02590	SM00448	cheY-homologous receiver domain
A9P82_02635	SM00411	bacterial (prokaryotic) histone like domain
A9P82_02655	SM01409	A9P82_02655
A9P82_02750	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_02765	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_02820	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9P82_02850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9P82_02885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9P82_02915	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_02990	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_03005	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9P82_03005	SM00876	Biotin and Thiamin Synthesis associated domain
A9P82_03010	SM00858	A9P82_03010
A9P82_03030	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_03060	SM00479	A9P82_03060
A9P82_03245	SM00955	A9P82_03245
A9P82_03280	SM00341	Helicase and RNase D C-terminal
A9P82_03280	SM00487	DEAD-like helicases superfamily
A9P82_03280	SM00490	helicase superfamily c-terminal domain
A9P82_03280	SM00956	A9P82_03280
A9P82_03340	SM00953	A9P82_03340
A9P82_03365	SM00986	Uracil DNA glycosylase superfamily
A9P82_03365	SM00987	UreE urease accessory protein, C-terminal domain 
A9P82_03370	SM00563	Phosphate acyltransferases
A9P82_03380	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9P82_03420	SM00867	YceI-like domain 
A9P82_03430	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9P82_03495	SM00640	Glycosyl hydrolases family 32
A9P82_03510	SM00382	ATPases associated with a variety of cellular activities
A9P82_03625	SM00028	Tetratricopeptide repeats
A9P82_03670	SM00100	Cyclic nucleotide-monophosphate binding domain
A9P82_03695	SM00382	ATPases associated with a variety of cellular activities
A9P82_03765	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_03775	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_03820	SM00849	Metallo-beta-lactamase superfamily
A9P82_03820	SM01027	Beta-Casp domain
A9P82_03870	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A9P82_03880	SM00316	Ribosomal protein S1-like RNA-binding domain
A9P82_03945	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9P82_04030	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_04040	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_04050	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_04055	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_04095	SM00287	Bacterial SH3 domain homologues
A9P82_04135	SM00487	DEAD-like helicases superfamily
A9P82_04135	SM00490	helicase superfamily c-terminal domain
A9P82_04175	SM00072	Guanylate kinase homologues.
A9P82_04185	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9P82_04190	SM00746	metallochaperone-like domain
A9P82_04350	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_04350	SM00387	Histidine kinase-like ATPases
A9P82_04350	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_04350	SM00448	cheY-homologous receiver domain
A9P82_04460	SM00382	ATPases associated with a variety of cellular activities
A9P82_04530	SM00448	cheY-homologous receiver domain
A9P82_04530	SM00850	LytTr DNA-binding domain
A9P82_04560	SM00382	ATPases associated with a variety of cellular activities
A9P82_04590	SM00028	Tetratricopeptide repeats
A9P82_04635	SM00245	tail specific protease
A9P82_04680	SM00382	ATPases associated with a variety of cellular activities
A9P82_04685	SM01329	A9P82_04685
A9P82_04730	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_04740	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9P82_04770	SM00245	tail specific protease
A9P82_04790	SM00965	Secretin and TonB N terminus short domain
A9P82_04865	SM00881	CoA binding domain
A9P82_04890	SM00382	ATPases associated with a variety of cellular activities
A9P82_04905	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_04935	SM00829	Enoylreductase
A9P82_05025	SM01192	A9P82_05025
A9P82_05025	SM01193	A9P82_05025
A9P82_05055	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9P82_05055	SM00292	breast cancer carboxy-terminal domain
A9P82_05055	SM00532	Ligase N family
A9P82_05130	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9P82_05130	SM00924	MgtE intracellular N domain
A9P82_05175	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_05195	SM00450	Rhodanese Homology Domain
A9P82_05250	SM00434	DNA Topoisomerase IV
A9P82_05260	SM00448	cheY-homologous receiver domain
A9P82_05260	SM00850	LytTr DNA-binding domain
A9P82_05275	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9P82_05290	SM00382	ATPases associated with a variety of cellular activities
A9P82_05320	SM00382	ATPases associated with a variety of cellular activities
A9P82_05340	SM00849	Metallo-beta-lactamase superfamily
A9P82_05385	SM00226	Low molecular weight phosphatase family
A9P82_05405	SM00852	Probable molybdopterin binding domain
A9P82_05415	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9P82_05420	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A9P82_05470	SM00633	Glycosyl hydrolase family 10
A9P82_05475	SM01217	A9P82_05475
A9P82_05480	SM00606	Cellulose Binding Domain Type IV
A9P82_05505	SM00354	helix_turn _helix lactose operon repressor
A9P82_05510	SM00354	helix_turn _helix lactose operon repressor
A9P82_05530	SM00382	ATPases associated with a variety of cellular activities
A9P82_05530	SM00464	Found in ATP-dependent protease La (LON)
A9P82_05565	SM00448	cheY-homologous receiver domain
A9P82_05565	SM00850	LytTr DNA-binding domain
A9P82_05605	SM01149	A9P82_05605
A9P82_05610	SM00028	Tetratricopeptide repeats
A9P82_05640	SM01323	A9P82_05640
A9P82_05710	SM00646	A9P82_05710
A9P82_05810	SM00387	Histidine kinase-like ATPases
A9P82_05820	SM00421	helix_turn_helix, Lux Regulon
A9P82_05820	SM00448	cheY-homologous receiver domain
A9P82_05825	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_05980	SM00984	UDP binding domain
A9P82_06065	SM00387	Histidine kinase-like ATPases
A9P82_06065	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_06070	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_06070	SM00448	cheY-homologous receiver domain
A9P82_06080	SM00562	A9P82_06080
A9P82_06125	SM00382	ATPases associated with a variety of cellular activities
A9P82_06130	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_06145	SM00244	prohibitin homologues
A9P82_06200	SM00382	ATPases associated with a variety of cellular activities
A9P82_06235	SM01211	A9P82_06235
A9P82_06280	SM01329	A9P82_06280
A9P82_06305	SM00382	ATPases associated with a variety of cellular activities
A9P82_06325	SM00028	Tetratricopeptide repeats
A9P82_06330	SM00327	von Willebrand factor (vWF) type A domain
A9P82_06365	SM00849	Metallo-beta-lactamase superfamily
A9P82_06400	SM01192	A9P82_06400
A9P82_06400	SM01193	A9P82_06400
A9P82_06430	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_06450	SM00822	A9P82_06450
A9P82_06470	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_06475	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_06490	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_06495	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_06505	SM00382	ATPases associated with a variety of cellular activities
A9P82_06525	SM00421	helix_turn_helix, Lux Regulon
A9P82_06550	SM01011	Aminopeptidase P, N-terminal domain
A9P82_06615	SM00478	endonuclease III
A9P82_06615	SM00525	A9P82_06615
A9P82_06625	SM00387	Histidine kinase-like ATPases
A9P82_06625	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_06630	SM00448	cheY-homologous receiver domain
A9P82_06630	SM00862	Transcriptional regulatory protein, C terminal
A9P82_06690	SM00354	helix_turn _helix lactose operon repressor
A9P82_06695	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9P82_06705	SM00382	ATPases associated with a variety of cellular activities
A9P82_06740	SM00966	SpoVT / AbrB like domain 
A9P82_06805	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
A9P82_06840	SM00798	AICARFT/IMPCHase bienzyme
A9P82_06840	SM00851	MGS-like domain
A9P82_06850	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9P82_06885	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9P82_06885	SM01240	A9P82_06885
A9P82_06925	SM00271	DnaJ molecular chaperone homology domain
A9P82_06940	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_06995	SM00812	Alpha-L-fucosidase
A9P82_07050	SM00382	ATPases associated with a variety of cellular activities
A9P82_07080	SM00448	cheY-homologous receiver domain
A9P82_07080	SM00862	Transcriptional regulatory protein, C terminal
A9P82_07090	SM00965	Secretin and TonB N terminus short domain
A9P82_07195	SM01011	Aminopeptidase P, N-terminal domain
A9P82_07230	SM01130	A9P82_07230
A9P82_07235	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_07330	SM00861	Transketolase, pyrimidine binding domain
A9P82_07340	SM00946	Prolyl-tRNA synthetase, C-terminal
A9P82_07350	SM01130	A9P82_07350
A9P82_07410	SM00851	MGS-like domain
A9P82_07430	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9P82_07450	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9P82_07470	SM01040	BRO family, N-terminal domain
A9P82_07525	SM00382	ATPases associated with a variety of cellular activities
A9P82_07535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9P82_07545	SM00382	ATPases associated with a variety of cellular activities
A9P82_07610	SM00487	DEAD-like helicases superfamily
A9P82_07610	SM00490	helicase superfamily c-terminal domain
A9P82_07625	SM00382	ATPases associated with a variety of cellular activities
A9P82_07735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9P82_07735	SM00954	Region found in RelA / SpoT proteins
A9P82_07765	SM01207	A9P82_07765
A9P82_07885	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9P82_07975	SM01217	A9P82_07975
A9P82_07980	SM00421	helix_turn_helix, Lux Regulon
A9P82_07995	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_08000	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_08030	SM00400	zinc finger
A9P82_08065	SM00481	DNA polymerase alpha chain like domain
A9P82_08070	SM00465	GIY-YIG type nucleases (URI domain)
A9P82_08070	SM00479	A9P82_08070
A9P82_08130	SM00382	ATPases associated with a variety of cellular activities
A9P82_08175	SM00481	DNA polymerase alpha chain like domain
A9P82_08205	SM00487	DEAD-like helicases superfamily
A9P82_08205	SM00490	helicase superfamily c-terminal domain
A9P82_08215	SM00448	cheY-homologous receiver domain
A9P82_08215	SM00850	LytTr DNA-binding domain
A9P82_08235	SM01235	A9P82_08235
A9P82_08265	SM00448	cheY-homologous receiver domain
A9P82_08265	SM00850	LytTr DNA-binding domain
A9P82_08280	SM00843	A9P82_08280
A9P82_08285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9P82_08285	SM00245	tail specific protease
A9P82_08355	SM00671	Sel1-like repeats.
A9P82_08375	SM00506	Appr-1"-p processing enzyme
A9P82_08385	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
A9P82_08395	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_08445	SM00506	Appr-1"-p processing enzyme
A9P82_08455	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
A9P82_08465	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_08610	SM01269	A9P82_08610
A9P82_08635	SM00422	helix_turn_helix, mercury resistance
A9P82_08640	SM00248	ankyrin repeats
A9P82_08665	SM00845	GatB domain
A9P82_08720	SM00382	ATPases associated with a variety of cellular activities
A9P82_08810	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_08830	SM00028	Tetratricopeptide repeats
A9P82_08850	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_08900	SM00360	RNA recognition motif
A9P82_08905	SM00357	Cold shock protein domain
A9P82_08910	SM00360	RNA recognition motif
A9P82_08930	SM00812	Alpha-L-fucosidase
A9P82_08935	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_08945	SM00382	ATPases associated with a variety of cellular activities
A9P82_08950	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9P82_08980	SM00861	Transketolase, pyrimidine binding domain
A9P82_09040	SM00387	Histidine kinase-like ATPases
A9P82_09040	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_09045	SM00448	cheY-homologous receiver domain
A9P82_09045	SM00862	Transcriptional regulatory protein, C terminal
A9P82_09065	SM00873	B3/4 domain
A9P82_09065	SM00874	tRNA synthetase B5 domain
A9P82_09065	SM00896	Ferredoxin-fold anticodon binding domain
A9P82_09080	SM00357	Cold shock protein domain
A9P82_09080	SM00382	ATPases associated with a variety of cellular activities
A9P82_09080	SM00959	Rho termination factor, N-terminal domain
A9P82_09105	SM00322	K homology RNA-binding domain
A9P82_09105	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9P82_09160	SM00360	RNA recognition motif
A9P82_09180	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_09190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9P82_09190	SM00895	A9P82_09190
A9P82_09230	SM00849	Metallo-beta-lactamase superfamily
A9P82_09240	SM00470	ParB-like nuclease domain
A9P82_09315	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_09340	SM00849	Metallo-beta-lactamase superfamily
A9P82_09345	SM00644	A9P82_09345
A9P82_09355	SM00047	Lysozyme subfamily 2
A9P82_09365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9P82_09365	SM00245	tail specific protease
A9P82_09465	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_09515	SM00322	K homology RNA-binding domain
A9P82_09545	SM00479	A9P82_09545
A9P82_09565	SM00244	prohibitin homologues
A9P82_09680	SM00478	endonuclease III
A9P82_09685	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_09700	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9P82_09720	SM00327	von Willebrand factor (vWF) type A domain
A9P82_09730	SM00226	Low molecular weight phosphatase family
A9P82_09735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9P82_09755	SM00646	A9P82_09755
A9P82_09815	SM00838	Elongation factor G C-terminus
A9P82_09815	SM00889	Elongation factor G, domain IV
A9P82_09820	SM00878	Biotin carboxylase C-terminal domain
A9P82_09840	SM00841	Elongation factor P, C-terminal
A9P82_09840	SM01185	A9P82_09840
A9P82_09890	SM00712	DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria.
A9P82_09895	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_09925	SM00382	ATPases associated with a variety of cellular activities
A9P82_09945	SM00904	Riboflavin kinase
A9P82_09985	SM00387	Histidine kinase-like ATPases
A9P82_09985	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_09990	SM00448	cheY-homologous receiver domain
A9P82_09990	SM00862	Transcriptional regulatory protein, C terminal
A9P82_10030	SM00382	ATPases associated with a variety of cellular activities
A9P82_10030	SM01086	C-terminal, D2-small domain, of ClpB protein
A9P82_10070	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_10090	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_10095	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9P82_10105	SM00382	ATPases associated with a variety of cellular activities
A9P82_10125	SM00421	helix_turn_helix, Lux Regulon
A9P82_10185	SM00382	ATPases associated with a variety of cellular activities
A9P82_10220	SM00387	Histidine kinase-like ATPases
A9P82_10220	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_10225	SM00448	cheY-homologous receiver domain
A9P82_10225	SM00862	Transcriptional regulatory protein, C terminal
A9P82_10245	SM00710	Parallel beta-helix repeats
A9P82_10255	SM00354	helix_turn _helix lactose operon repressor
A9P82_10355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9P82_10375	SM01007	Class II Aldolase and Adducin N-terminal domain
A9P82_10430	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_10485	SM00448	cheY-homologous receiver domain
A9P82_10485	SM00850	LytTr DNA-binding domain
A9P82_10520	SM00487	DEAD-like helicases superfamily
A9P82_10545	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_10550	SM00028	Tetratricopeptide repeats
A9P82_10605	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_10630	SM00100	Cyclic nucleotide-monophosphate binding domain
A9P82_10735	SM00400	zinc finger
A9P82_10735	SM00493	A9P82_10735
A9P82_10850	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9P82_10850	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9P82_10850	SM00493	A9P82_10850
A9P82_10875	SM00490	helicase superfamily c-terminal domain
A9P82_10925	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_10940	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_10955	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_10985	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_10995	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_11015	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_11045	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_11050	SM00822	A9P82_11050
A9P82_11060	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9P82_11065	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_11135	SM00487	DEAD-like helicases superfamily
A9P82_11300	SM00354	helix_turn _helix lactose operon repressor
A9P82_11310	SM00382	ATPases associated with a variety of cellular activities
A9P82_11345	SM00100	Cyclic nucleotide-monophosphate binding domain
A9P82_11345	SM00419	helix_turn_helix, cAMP Regulatory protein
A9P82_11345	SM00448	cheY-homologous receiver domain
A9P82_11350	SM00091	PAS domain
A9P82_11350	SM00387	Histidine kinase-like ATPases
A9P82_11350	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_11365	SM00831	Cation transporter/ATPase, N-terminus
A9P82_11370	SM00465	GIY-YIG type nucleases (URI domain)
A9P82_11400	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_11415	SM00710	Parallel beta-helix repeats
A9P82_11455	SM00642	Alpha-amylase domain
A9P82_11465	SM00642	Alpha-amylase domain
A9P82_11530	SM00825	Beta-ketoacyl synthase
A9P82_11535	SM00358	Double-stranded RNA binding motif
A9P82_11535	SM00535	Ribonuclease III family
A9P82_11540	SM00788	Adenylosuccinate synthetase
A9P82_11565	SM00932	Scaffold protein Nfu/NifU N terminal
A9P82_11610	SM00387	Histidine kinase-like ATPases
A9P82_11615	SM00382	ATPases associated with a variety of cellular activities
A9P82_11615	SM00448	cheY-homologous receiver domain
A9P82_11625	SM00382	ATPases associated with a variety of cellular activities
A9P82_11645	SM00382	ATPases associated with a variety of cellular activities
A9P82_11710	SM00812	Alpha-L-fucosidase
A9P82_11825	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A9P82_11825	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A9P82_11895	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A9P82_11910	SM00899	A9P82_11910
A9P82_11920	SM01228	A9P82_11920
A9P82_11935	SM00382	ATPases associated with a variety of cellular activities
A9P82_11955	SM00028	Tetratricopeptide repeats
A9P82_11995	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9P82_12015	SM00448	cheY-homologous receiver domain
A9P82_12025	SM00448	cheY-homologous receiver domain
A9P82_12025	SM00850	LytTr DNA-binding domain
A9P82_12070	SM01209	A9P82_12070
A9P82_12070	SM01210	A9P82_12070
A9P82_12090	SM00028	Tetratricopeptide repeats
A9P82_12105	SM00448	cheY-homologous receiver domain
A9P82_12105	SM00850	LytTr DNA-binding domain
A9P82_12150	SM01217	A9P82_12150
A9P82_12190	SM01217	A9P82_12190
A9P82_12210	SM00060	Fibronectin type 3 domain
A9P82_12230	SM00387	Histidine kinase-like ATPases
A9P82_12230	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_12235	SM01230	A9P82_12235
A9P82_12240	SM00650	Ribosomal RNA adenine dimethylases
A9P82_12285	SM00257	Lysin motif
A9P82_12295	SM00487	DEAD-like helicases superfamily
A9P82_12295	SM00490	helicase superfamily c-terminal domain
A9P82_12295	SM00982	A9P82_12295
A9P82_12295	SM01058	CarD-like/TRCF domain
A9P82_12310	SM00382	ATPases associated with a variety of cellular activities
A9P82_12370	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A9P82_12375	SM00245	tail specific protease
A9P82_12390	SM00649	Ribosomal protein L11/L12
A9P82_12420	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_12475	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9P82_12515	SM01005	Alanine racemase, C-terminal domain
A9P82_12525	SM01360	A9P82_12525
A9P82_12535	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9P82_12540	SM00867	YceI-like domain 
A9P82_12555	SM00480	DNA polymerase III beta subunit
A9P82_12655	SM00965	Secretin and TonB N terminus short domain
A9P82_12715	SM00354	helix_turn _helix lactose operon repressor
A9P82_12725	SM00448	cheY-homologous receiver domain
A9P82_12725	SM00862	Transcriptional regulatory protein, C terminal
A9P82_12730	SM00387	Histidine kinase-like ATPases
A9P82_12730	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_12755	SM00812	Alpha-L-fucosidase
A9P82_12790	SM00245	tail specific protease
A9P82_12800	SM01321	A9P82_12800
A9P82_12810	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_12815	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_13010	SM00448	cheY-homologous receiver domain
A9P82_13010	SM00850	LytTr DNA-binding domain
A9P82_13180	SM01217	A9P82_13180
A9P82_13195	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_13210	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9P82_13225	SM00487	DEAD-like helicases superfamily
A9P82_13225	SM00490	helicase superfamily c-terminal domain
A9P82_13240	SM00529	Helix-turn-helix diphteria tox regulatory element
A9P82_13260	SM00838	Elongation factor G C-terminus
A9P82_13280	SM00460	Transglutaminase/protease-like homologues
A9P82_13310	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9P82_13315	SM00354	helix_turn _helix lactose operon repressor
A9P82_13370	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A9P82_13380	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A9P82_13430	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9P82_13445	SM01004	Delta-aminolevulinic acid dehydratase
A9P82_13465	SM00937	A9P82_13465
A9P82_13495	SM00450	Rhodanese Homology Domain
A9P82_13495	SM00849	Metallo-beta-lactamase superfamily
A9P82_13500	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9P82_13645	SM00421	helix_turn_helix, Lux Regulon
A9P82_13725	SM00448	cheY-homologous receiver domain
A9P82_13725	SM00850	LytTr DNA-binding domain
A9P82_13730	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_13770	SM01217	A9P82_13770
A9P82_13775	SM00382	ATPases associated with a variety of cellular activities
A9P82_13800	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9P82_13825	SM00382	ATPases associated with a variety of cellular activities
A9P82_13930	SM00836	DALR anticodon binding domain
A9P82_13930	SM01016	Arginyl tRNA synthetase N terminal dom
A9P82_13940	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A9P82_13995	SM00487	DEAD-like helicases superfamily
A9P82_13995	SM00490	helicase superfamily c-terminal domain
A9P82_14000	SM00849	Metallo-beta-lactamase superfamily
A9P82_14005	SM00387	Histidine kinase-like ATPases
A9P82_14030	SM00861	Transketolase, pyrimidine binding domain
A9P82_14055	SM00382	ATPases associated with a variety of cellular activities
A9P82_14060	SM00853	MutL C terminal dimerisation domain
A9P82_14060	SM01340	A9P82_14060
A9P82_14075	SM00327	von Willebrand factor (vWF) type A domain
A9P82_14095	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_14105	SM00421	helix_turn_helix, Lux Regulon
A9P82_14105	SM00448	cheY-homologous receiver domain
A9P82_14110	SM00387	Histidine kinase-like ATPases
A9P82_14110	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_14110	SM00448	cheY-homologous receiver domain
A9P82_14135	SM00382	ATPases associated with a variety of cellular activities
A9P82_14140	SM00864	Tubulin/FtsZ family, GTPase domain
A9P82_14140	SM00865	Tubulin/FtsZ family, C-terminal domain
A9P82_14145	SM00842	Cell division protein FtsA
A9P82_14255	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9P82_14260	SM00996	S-adenosyl-L-homocysteine hydrolase
A9P82_14260	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A9P82_14345	SM00448	cheY-homologous receiver domain
A9P82_14345	SM00850	LytTr DNA-binding domain
A9P82_14380	SM00363	S4 RNA-binding domain
A9P82_14420	SM00363	S4 RNA-binding domain
A9P82_14420	SM01390	A9P82_14420
A9P82_14425	SM00662	RNA polymerases D
A9P82_14440	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_14440	SM00387	Histidine kinase-like ATPases
A9P82_14440	SM00388	His Kinase A (phosphoacceptor) domain
A9P82_14440	SM00448	cheY-homologous receiver domain
A9P82_14475	SM00813	Alpha-L-arabinofuranosidase C-terminus
A9P82_14500	SM00344	helix_turn_helix ASNC type
A9P82_14505	SM00905	Dihydroneopterin aldolase
A9P82_14555	SM01403	A9P82_14555
A9P82_14575	SM01382	A9P82_14575
A9P82_14575	SM01383	A9P82_14575
A9P82_14590	SM00322	K homology RNA-binding domain
A9P82_14610	SM01374	A9P82_14610
A9P82_14665	SM01217	A9P82_14665
A9P82_14670	SM00796	Allophanate hydrolase subunit 1
A9P82_14675	SM00797	Allophanate hydrolase subunit 2
A9P82_14740	SM00829	Enoylreductase
A9P82_14770	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_14790	SM00530	Helix-turn-helix XRE-family like proteins 
A9P82_14805	SM00812	Alpha-L-fucosidase
A9P82_14820	SM01038	Beta galactosidase small chain
A9P82_14855	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_14875	SM01133	A9P82_14875
A9P82_14895	SM00382	ATPases associated with a variety of cellular activities
A9P82_14935	SM00382	ATPases associated with a variety of cellular activities
A9P82_15010	SM00448	cheY-homologous receiver domain
A9P82_15010	SM00850	LytTr DNA-binding domain
A9P82_15015	SM00387	Histidine kinase-like ATPases
A9P82_15040	SM00382	ATPases associated with a variety of cellular activities
A9P82_15055	SM00935	Outer membrane protein (OmpH-like)
A9P82_15060	SM00935	Outer membrane protein (OmpH-like)
A9P82_15070	SM00382	ATPases associated with a variety of cellular activities
A9P82_15070	SM00962	SRP54-type protein, GTPase domain
A9P82_15070	SM00963	SRP54-type protein, helical bundle domain
A9P82_15110	SM00840	A9P82_15110
A9P82_15130	SM00342	helix_turn_helix, arabinose operon control protein
A9P82_15170	SM00732	Likely ribonuclease with RNase H fold.
