locus-tag	class	description
J5A53_00005	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J5A53_00010	COG4608	Belongs to the ABC transporter superfamily
J5A53_00015	COG0444	Belongs to the ABC transporter superfamily
J5A53_00020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5A53_00025	COG0601	transmembrane transport
J5A53_00030	COG0747	negative chemotaxis
J5A53_00050	COG0640	Transcriptional regulator
J5A53_00055	COG2814	Major facilitator Superfamily
J5A53_00065	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J5A53_00070	COG0187	DNA topoisomerase II activity
J5A53_00095	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
J5A53_00100	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J5A53_00110	COG0592	DNA-directed DNA polymerase activity
J5A53_00115	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
J5A53_00120	COG0230	Belongs to the bacterial ribosomal protein bL34 family
J5A53_00125	COG0594	ribonuclease P activity
J5A53_00130	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
J5A53_00135	COG0706	membrane insertase activity
J5A53_00145	COG0357	Ribosomal RNA small subunit methyltransferase G
J5A53_00170	COG1181	Belongs to the D-alanine--D-alanine ligase family
J5A53_00190	COG0492	ferredoxin-NADP+ reductase activity
J5A53_00215	COG1505	serine-type exopeptidase activity
J5A53_00220	COG1024	Enoyl-CoA hydratase
J5A53_00230	COG1971	Probably functions as a manganese efflux pump
J5A53_00235	COG1321	iron dependent repressor
J5A53_00265	COG2267	carboxylic ester hydrolase activity
J5A53_00270	COG0783	Belongs to the Dps family
J5A53_00280	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_00285	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_00290	COG1120	ATPase activity
J5A53_00305	COG3527	Alpha-acetolactate decarboxylase
J5A53_00315	COG0768	penicillin binding
J5A53_00345	COG2856	Zn peptidase
J5A53_00370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
J5A53_00440	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5A53_00450	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J5A53_00465	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
J5A53_00500	COG0521	Mo-molybdopterin cofactor biosynthetic process
J5A53_00500	COG0315	cyclic pyranopterin monophosphate synthase activity
J5A53_00505	COG0653	protein targeting
J5A53_00510	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
J5A53_00530	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5A53_00545	COG0791	NLP P60 protein
J5A53_00545	COG3883	PFAM NLP P60 protein
J5A53_00605	COG3012	SEC-C Motif Domain Protein
J5A53_00620	COG1408	metallophosphoesterase
J5A53_00625	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5A53_00635	COG0733	neurotransmitter:sodium symporter activity
J5A53_00650	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
J5A53_00660	COG0519	Catalyzes the synthesis of GMP from XMP
J5A53_00675	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
J5A53_00685	COG1696	Membrane protein involved in D-alanine export
J5A53_00690	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5A53_00700	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5A53_00755	COG3588	fructose-bisphosphate aldolase
J5A53_00780	COG3848	Pyruvate phosphate dikinase
J5A53_00780	COG0574	Belongs to the PEP-utilizing enzyme family
J5A53_00790	COG0442	prolyl-tRNA aminoacylation
J5A53_00810	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
J5A53_00835	COG1674	ftsk spoiiie
J5A53_00965	COG1215	transferase activity, transferring glycosyl groups
J5A53_00985	COG1216	Glycosyl transferase, family 2
J5A53_00985	COG0438	transferase activity, transferring glycosyl groups
J5A53_01050	COG0039	L-malate dehydrogenase activity
J5A53_01065	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
J5A53_01080	COG4869	propanediol catabolic process
J5A53_01135	COG4917	ethanolamine utilization protein
J5A53_01160	COG0789	Transcriptional regulator
J5A53_01165	COG0667	Aldo Keto reductase
J5A53_01170	COG1129	ABC transporter
J5A53_01190	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5A53_01200	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
J5A53_01215	COG0137	argininosuccinate synthase activity
J5A53_01245	COG1316	TRANSCRIPTIONal
J5A53_01265	COG0584	glycerophosphoryl diester phosphodiesterase
J5A53_01270	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
J5A53_01280	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
J5A53_01295	COG1621	beta-fructofuranosidase activity
J5A53_01310	COG1175	transmembrane transport
J5A53_01390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_01395	COG1120	ATPase activity
J5A53_01400	COG1429	ligase activity, forming nitrogen-metal bonds
J5A53_01415	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
J5A53_01425	COG3655	Transcriptional regulator
J5A53_01430	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5A53_01440	COG5564	TIM-barrel signal transduction protein
J5A53_01485	COG3311	Transcriptional regulator
J5A53_01495	COG1715	Restriction endonuclease
J5A53_01500	COG0732	type I restriction modification DNA specificity domain
J5A53_01525	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5A53_01530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_01535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_01540	COG1120	ATPase activity
J5A53_01545	COG1132	(ABC) transporter
J5A53_01550	COG1132	(ABC) transporter
J5A53_01575	COG1131	(ABC) transporter
J5A53_01580	COG4585	Histidine kinase
J5A53_01585	COG2197	response regulator
J5A53_01600	COG0433	COG0433 Predicted ATPase
J5A53_01615	COG1120	ATPase activity
J5A53_01620	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_01635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_01640	COG1120	ATPase activity
J5A53_01655	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J5A53_01675	COG0673	inositol 2-dehydrogenase activity
J5A53_01690	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
J5A53_01725	COG0601	transmembrane transport
J5A53_01730	COG0673	inositol 2-dehydrogenase activity
J5A53_01760	COG0717	Belongs to the dCTP deaminase family
J5A53_01775	COG1132	(ABC) transporter
J5A53_01815	COG2375	cellular response to nickel ion
J5A53_01815	COG1132	(ABC) transporter
J5A53_01825	COG1129	ABC transporter
J5A53_01835	COG2814	Major facilitator Superfamily
J5A53_01840	COG1021	2,3-dihydroxybenzoate-AMP ligase
J5A53_01845	COG1021	2,3-dihydroxybenzoate-AMP ligase
J5A53_01860	COG1129	ABC transporter
J5A53_01910	COG0318	PFAM AMP-dependent synthetase and ligase
J5A53_01920	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5A53_01920	COG2226	methyltransferase
J5A53_01920	COG3433	isochorismatase activity
J5A53_01940	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
J5A53_01945	COG2205	protein histidine kinase activity
J5A53_01950	COG0745	RESPONSE REGULATOR receiver
J5A53_01975	COG1116	anion transmembrane transporter activity
J5A53_01980	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
J5A53_01990	COG1252	NADH dehydrogenase
J5A53_01995	COG2211	Major facilitator Superfamily
J5A53_02005	COG1609	Transcriptional regulator
J5A53_02025	COG1136	(ABC) transporter
J5A53_02025	COG0577	efflux transmembrane transporter activity
J5A53_02030	COG0577	efflux transmembrane transporter activity
J5A53_02030	COG1136	(ABC) transporter
J5A53_02075	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
J5A53_02080	COG2027	D-alanyl-D-alanine carboxypeptidase
J5A53_02110	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5A53_02115	COG0438	transferase activity, transferring glycosyl groups
J5A53_02145	COG3263	regulation of cellular component size
J5A53_02150	COG2827	Endonuclease containing a URI domain
J5A53_02210	COG1468	defense response to virus
J5A53_02210	COG1518	maintenance of DNA repeat elements
J5A53_02215	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
J5A53_02245	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
J5A53_02250	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5A53_02275	COG0515	serine threonine protein kinase
J5A53_02280	COG0768	penicillin binding
J5A53_02300	COG1716	ATPase activity
J5A53_02330	COG1216	Glycosyl transferase, family 2
J5A53_02340	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J5A53_02345	COG0656	L-ascorbic acid biosynthetic process
J5A53_02350	COG0018	arginyl-trna synthetase
J5A53_02365	COG1136	(ABC) transporter
J5A53_02370	COG1621	beta-fructofuranosidase activity
J5A53_02380	COG0385	Bile acid
J5A53_02385	COG1968	undecaprenyl-diphosphatase activity
J5A53_02390	COG1940	carbohydrate kinase activity
J5A53_02430	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J5A53_02430	COG1754	DNA topoisomerase type I activity
J5A53_02460	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
J5A53_02465	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
J5A53_02485	COG1774	PSP1 C-terminal conserved region
J5A53_02495	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
J5A53_02510	COG1722	exodeoxyribonuclease VII activity
J5A53_02515	COG1570	exodeoxyribonuclease VII activity
J5A53_02530	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
J5A53_02570	COG0813	purine-nucleoside phosphorylase activity
J5A53_02575	COG1322	Protein conserved in bacteria
J5A53_02580	COG1362	aminopeptidase activity
J5A53_02585	COG0012	GTP binding
J5A53_02615	COG1396	sequence-specific DNA binding
J5A53_02620	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
J5A53_02645	COG0456	acetyltransferase
J5A53_02680	COG1733	regulation of RNA biosynthetic process
J5A53_02695	COG3226	Transcriptional regulator
J5A53_02700	COG2161	toxin-antitoxin pair type II binding
J5A53_02705	COG4115	mRNA cleavage
J5A53_02715	COG4691	Plasmid stability protein
J5A53_02725	COG2814	Major facilitator Superfamily
J5A53_02755	COG0477	Major facilitator Superfamily
J5A53_02760	COG1309	transcriptional regulator
J5A53_02805	COG1234	tRNA 3'-trailer cleavage
J5A53_02860	COG0174	glutamine synthetase
J5A53_02870	COG0477	Major facilitator Superfamily
J5A53_02890	COG0281	malic enzyme
J5A53_02905	COG3226	Transcriptional regulator
J5A53_02935	COG1970	mechanosensitive ion channel activity
J5A53_02950	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
J5A53_03155	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
J5A53_03160	COG0484	heat shock protein binding
J5A53_03165	COG0789	Transcriptional regulator
J5A53_03170	COG0366	Alpha amylase catalytic
J5A53_03185	COG1175	transmembrane transport
J5A53_03190	COG3833	ABC-type maltose transport systems, permease component
J5A53_03195	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5A53_03210	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
J5A53_03215	COG2838	Isocitrate dehydrogenase
J5A53_03255	COG0166	Belongs to the GPI family
J5A53_03300	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
J5A53_03305	COG2011	ABC-type metal ion transport system permease component
J5A53_03310	COG1464	Belongs to the NlpA lipoprotein family
J5A53_03320	COG1473	amidohydrolase
J5A53_03345	COG0560	Phosphoserine phosphatase
J5A53_03345	COG3830	Belongs to the UPF0237 family
J5A53_03350	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J5A53_03355	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5A53_03365	COG0454	-acetyltransferase
J5A53_03365	COG0456	acetyltransferase
J5A53_03390	COG2814	Major facilitator Superfamily
J5A53_03405	COG0840	transmembrane signaling receptor activity
J5A53_03420	COG0515	serine threonine protein kinase
J5A53_03445	COG0076	glutamate decarboxylase activity
J5A53_03450	COG2056	Na+-H+ antiporter family
J5A53_03470	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
J5A53_03485	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
J5A53_03490	COG1848	Toxic component of a toxin-antitoxin (TA) module. An RNase
J5A53_03510	COG0577	efflux transmembrane transporter activity
J5A53_03510	COG1136	(ABC) transporter
J5A53_03515	COG1136	(ABC) transporter
J5A53_03520	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
J5A53_03525	COG2197	response regulator
J5A53_03530	COG4585	Histidine kinase
J5A53_03585	COG2409	Drug exporters of the RND superfamily
J5A53_03610	COG0667	Aldo Keto reductase
J5A53_03625	COG1131	(ABC) transporter
J5A53_03630	COG4585	Histidine kinase
J5A53_03635	COG2197	response regulator
J5A53_03645	COG1028	Short-chain dehydrogenase reductase Sdr
J5A53_03645	COG3321	synthase
J5A53_03645	COG0604	alcohol dehydrogenase
J5A53_03700	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
J5A53_03705	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
J5A53_03720	COG0640	Transcriptional regulator
J5A53_03755	COG4166	transmembrane transport
J5A53_03760	COG1132	(ABC) transporter
J5A53_03765	COG1132	(ABC) transporter
J5A53_03765	COG2375	cellular response to nickel ion
J5A53_03785	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
J5A53_03795	COG1461	Dihydroxyacetone kinase
J5A53_03815	COG4948	Mandelate Racemase Muconate Lactonizing
J5A53_03820	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
J5A53_03830	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
J5A53_03835	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
J5A53_03845	COG2226	methyltransferase
J5A53_03855	COG4133	protoheme IX ABC transporter activity
J5A53_03875	COG1169	isochorismate synthase
J5A53_03890	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5A53_03895	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5A53_03900	COG0649	NAD binding
J5A53_03910	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
J5A53_03915	COG1034	ATP synthesis coupled electron transport
J5A53_03920	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
J5A53_03925	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5A53_03930	COG0839	Belongs to the complex I subunit 6 family
J5A53_03935	COG0713	ATP synthesis coupled electron transport
J5A53_03950	COG1007	ATP synthesis coupled electron transport
J5A53_03955	COG0142	geranyltranstransferase activity
J5A53_03975	COG3552	Protein containing von Willebrand factor type A (VWA) domain
J5A53_03980	COG0714	Associated with various cellular activities
J5A53_04005	COG1013	pyruvate-flavodoxin oxidoreductase activity
J5A53_04010	COG0674	pyruvate-flavodoxin oxidoreductase activity
J5A53_04010	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
J5A53_04025	COG0708	Exodeoxyribonuclease III
J5A53_04030	COG2354	Protein conserved in bacteria
J5A53_04040	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
J5A53_04040	COG4106	trans-aconitate 2-methyltransferase activity
J5A53_04045	COG1666	GTP binding
J5A53_04060	COG0813	purine-nucleoside phosphorylase activity
J5A53_04065	COG2190	(PTS) system
J5A53_04065	COG2211	Major facilitator Superfamily
J5A53_04070	COG0789	Transcriptional regulator
J5A53_04080	COG1022	Amp-dependent synthetase and ligase
J5A53_04100	COG0778	Nitroreductase
J5A53_04110	COG0577	efflux transmembrane transporter activity
J5A53_04110	COG1136	(ABC) transporter
J5A53_04125	COG0360	Binds together with S18 to 16S ribosomal RNA
J5A53_04135	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
J5A53_04140	COG0359	binds to the 23S rRNA
J5A53_04150	COG0577	efflux transmembrane transporter activity
J5A53_04150	COG1136	(ABC) transporter
J5A53_04180	COG4585	Histidine kinase
J5A53_04200	COG4585	Histidine kinase
J5A53_04205	COG2197	response regulator
J5A53_04215	COG0737	Belongs to the 5'-nucleotidase family
J5A53_04245	COG1131	(ABC) transporter
J5A53_04260	COG0371	Dehydrogenase
J5A53_04270	COG3732	PTS system glucitol sorbitol-specific
J5A53_04285	COG3711	transcriptional antiterminator
J5A53_04285	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5A53_04290	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
J5A53_04320	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J5A53_04325	COG2030	dehydratase
J5A53_04335	COG0812	UDP-N-acetylmuramate dehydrogenase activity
J5A53_04350	COG0250	Participates in transcription elongation, termination and antitermination
J5A53_04355	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
J5A53_04360	COG0081	regulation of translation
J5A53_04375	COG0254	rRNA binding
J5A53_04380	COG0227	Belongs to the bacterial ribosomal protein bL28 family
J5A53_04385	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J5A53_04400	COG2378	regulation of single-species biofilm formation
J5A53_04420	COG1132	(ABC) transporter
J5A53_04425	COG1132	(ABC) transporter
J5A53_04430	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
J5A53_04435	COG0222	ribosome binding
J5A53_04445	COG0085	RNA polymerase activity
J5A53_04450	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
J5A53_04455	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
J5A53_04460	COG0049	tRNA binding
J5A53_04465	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
J5A53_04475	COG0698	ribose 5-phosphate isomerase
J5A53_04480	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
J5A53_04490	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J5A53_04500	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J5A53_04510	COG1136	(ABC) transporter
J5A53_04525	COG0051	transcription antitermination factor activity, RNA binding
J5A53_04530	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
J5A53_04535	COG0088	Forms part of the polypeptide exit tunnel
J5A53_04540	COG0089	rRNA binding
J5A53_04545	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
J5A53_04550	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
J5A53_04555	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
J5A53_04560	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
J5A53_04565	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
J5A53_04570	COG0255	Belongs to the universal ribosomal protein uL29 family
J5A53_04575	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
J5A53_04585	COG0784	Response regulator, receiver
J5A53_04585	COG2198	Histidine kinase
J5A53_04585	COG2205	protein histidine kinase activity
J5A53_04600	COG1528	Iron-storage protein
J5A53_04665	COG3883	PFAM NLP P60 protein
J5A53_04665	COG0791	NLP P60 protein
J5A53_04685	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
J5A53_04690	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
J5A53_04695	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
J5A53_04700	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
J5A53_04705	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
J5A53_04710	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
J5A53_04715	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
J5A53_04720	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
J5A53_04725	COG1841	ribosomal large subunit assembly
J5A53_04735	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
J5A53_04740	COG0201	protein transport
J5A53_04745	COG0563	adenylate kinase activity
J5A53_04750	COG0024	Methionine aminopeptidase
J5A53_04765	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
J5A53_04770	COG0257	Belongs to the bacterial ribosomal protein bL36 family
J5A53_04775	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
J5A53_04780	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
J5A53_04785	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
J5A53_04790	COG0202	RNA polymerase activity
J5A53_04795	COG0203	ribosomal protein L17
J5A53_04820	COG1674	ftsk spoiiie
J5A53_04925	COG0444	Belongs to the ABC transporter superfamily
J5A53_04930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5A53_04935	COG0601	transmembrane transport
J5A53_04960	COG0101	tRNA pseudouridine synthase activity
J5A53_04965	COG0220	tRNA (guanine-N7-)-methyltransferase activity
J5A53_04975	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_04980	COG1120	ATPase activity
J5A53_04985	COG3304	Inner membrane component domain
J5A53_05000	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J5A53_05000	COG2169	Transcriptional regulator
J5A53_05010	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
J5A53_05015	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J5A53_05020	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5A53_05025	COG1072	(Pantothenic acid kinase))
J5A53_05030	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J5A53_05030	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
J5A53_05035	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
J5A53_05040	COG0736	holo-[acyl-carrier-protein] synthase activity
J5A53_05085	COG0513	Belongs to the DEAD box helicase family
J5A53_05090	COG0802	atpase or kinase
J5A53_05095	COG0456	acetyltransferase
J5A53_05095	COG1214	PFAM Peptidase M22, glycoprotease
J5A53_05105	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
J5A53_05115	COG0601	transmembrane transport
J5A53_05120	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5A53_05145	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
J5A53_05150	COG0459	protein refolding
J5A53_05160	COG1486	melibiose metabolic process
J5A53_05170	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5A53_05175	COG2860	membrane
J5A53_05185	COG0516	GMP reductase activity
J5A53_05205	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_05210	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_05215	COG1120	ATPase activity
J5A53_05225	COG2826	transposase and inactivated derivatives, IS30 family
J5A53_05235	COG3226	Transcriptional regulator
J5A53_05255	COG0519	Catalyzes the synthesis of GMP from XMP
J5A53_05255	COG0518	GMP synthase (glutamine-hydrolyzing) activity
J5A53_05265	COG1848	Toxic component of a toxin-antitoxin (TA) module. An RNase
J5A53_05270	COG1129	ABC transporter
J5A53_05290	COG1983	PspC domain protein
J5A53_05305	COG2205	protein histidine kinase activity
J5A53_05310	COG2197	response regulator
J5A53_05320	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5A53_05345	COG0535	radical SAM domain protein
J5A53_05355	COG0138	bifunctional purine biosynthesis protein purh
J5A53_05360	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
J5A53_05370	COG0039	L-malate dehydrogenase activity
J5A53_05375	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5A53_05380	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5A53_05410	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
J5A53_05415	COG4988	ABC transporter
J5A53_05420	COG1132	(ABC) transporter
J5A53_05430	COG0010	Belongs to the arginase family
J5A53_05475	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J5A53_05485	COG0088	Forms part of the polypeptide exit tunnel
J5A53_05490	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J5A53_05515	COG2197	response regulator
J5A53_05520	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
J5A53_05540	COG0515	serine threonine protein kinase
J5A53_05540	COG2815	serine threonine protein kinase
J5A53_05550	COG4592	Periplasmic binding protein
J5A53_05555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_05560	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_05565	COG1120	ATPase activity
J5A53_05580	COG0142	geranyltranstransferase activity
J5A53_05585	COG2826	transposase and inactivated derivatives, IS30 family
J5A53_05595	COG3973	AAA domain
J5A53_05600	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
J5A53_05600	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
J5A53_05615	COG0477	Major facilitator Superfamily
J5A53_05630	COG0667	Aldo Keto reductase
J5A53_05640	COG0215	cysteine-tRNA ligase activity
J5A53_05645	COG0140	phosphoribosyl-ATP diphosphatase activity
J5A53_05650	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
J5A53_05670	COG1120	ATPase activity
J5A53_05675	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_05685	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
J5A53_05690	COG0291	Belongs to the bacterial ribosomal protein bL35 family
J5A53_05695	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
J5A53_05705	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
J5A53_05710	COG0072	phenylalanine-tRNA ligase activity
J5A53_05710	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5A53_05720	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5A53_05730	COG0495	leucyl-tRNA aminoacylation
J5A53_05735	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
J5A53_05740	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
J5A53_05745	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
J5A53_05750	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J5A53_05760	COG0165	Argininosuccinate lyase
J5A53_05775	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
J5A53_05800	COG0647	UMP catabolic process
J5A53_05815	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
J5A53_05820	COG0497	DNA recombination
J5A53_05825	COG1335	isochorismatase
J5A53_05845	COG0494	nUDIX hydrolase
J5A53_05870	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
J5A53_05885	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J5A53_05905	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J5A53_05910	COG0805	protein transport
J5A53_05920	COG4581	dead DEAH box helicase
J5A53_05925	COG0107	imidazoleglycerol-phosphate synthase activity
J5A53_05930	COG0537	adenosine 5'-monophosphoramidase activity
J5A53_05935	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
J5A53_05945	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
J5A53_05950	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J5A53_05955	COG3609	addiction module antidote protein, CC2985 family
J5A53_05960	COG2337	Toxic component of a toxin-antitoxin (TA) module
J5A53_06030	COG1053	succinate dehydrogenase
J5A53_06035	COG0477	Major facilitator Superfamily
J5A53_06040	COG1012	belongs to the aldehyde dehydrogenase family
J5A53_06050	COG0028	Belongs to the TPP enzyme family
J5A53_06060	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J5A53_06065	COG1309	transcriptional regulator
J5A53_06070	COG0710	3-dehydroquinate dehydratase activity
J5A53_06080	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
J5A53_06095	COG1333	cytochrome c biogenesis protein
J5A53_06100	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J5A53_06110	COG0129	dihydroxy-acid dehydratase activity
J5A53_06135	COG1643	Atp-dependent helicase
J5A53_06140	COG1946	Acyl-CoA thioesterase
J5A53_06150	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J5A53_06190	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
J5A53_06200	COG1615	UPF0182 protein
J5A53_06230	COG0714	Associated with various cellular activities
J5A53_06235	COG2001	Belongs to the MraZ family
J5A53_06240	COG0275	rRNA processing
J5A53_06250	COG0768	penicillin binding
J5A53_06255	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
J5A53_06260	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
J5A53_06265	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J5A53_06270	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
J5A53_06275	COG0772	Belongs to the SEDS family
J5A53_06280	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J5A53_06285	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J5A53_06300	COG1799	cell septum assembly
J5A53_06320	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
J5A53_06330	COG0469	pyruvate kinase activity
J5A53_06345	COG2050	protein possibly involved in aromatic compounds catabolism
J5A53_06360	COG0539	negative regulation of cytoplasmic translation
J5A53_06365	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J5A53_06365	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J5A53_06370	COG0509	glycine decarboxylation via glycine cleavage system
J5A53_06375	COG0404	The glycine cleavage system catalyzes the degradation of glycine
J5A53_06385	COG0237	dephospho-CoA kinase activity
J5A53_06390	COG0556	nucleotide-excision repair
J5A53_06405	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J5A53_06410	COG2197	response regulator
J5A53_06450	COG0277	FAD linked oxidase domain protein
J5A53_06460	COG1022	Amp-dependent synthetase and ligase
J5A53_06470	COG0583	DNA-binding transcription factor activity
J5A53_06485	COG1201	RNA secondary structure unwinding
J5A53_06500	COG0477	Major facilitator Superfamily
J5A53_06510	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
J5A53_06515	COG0540	Belongs to the ATCase OTCase family
J5A53_06525	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
J5A53_06530	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5A53_06560	COG0701	Predicted permease
J5A53_06595	COG0371	Dehydrogenase
J5A53_06600	COG1070	Carbohydrate kinase
J5A53_06605	COG0647	UMP catabolic process
J5A53_06615	COG0698	ribose 5-phosphate isomerase
J5A53_06620	COG1349	DNA-binding transcription factor activity
J5A53_06625	COG0586	Pfam SNARE associated Golgi protein
J5A53_06650	COG1950	PFAM Membrane protein of
J5A53_06670	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
J5A53_06675	COG0544	peptidyl-prolyl cis-trans isomerase activity
J5A53_06685	COG0740	serine-type endopeptidase activity
J5A53_06690	COG0740	serine-type endopeptidase activity
J5A53_06695	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
J5A53_06700	COG0793	Belongs to the peptidase S41A family
J5A53_06700	COG4946	Tricorn protease homolog
J5A53_06705	COG0525	valine-tRNA ligase activity
J5A53_06720	COG0285	dihydrofolate synthase activity
J5A53_06735	COG1530	ribonuclease E activity
J5A53_06735	COG1530	ribonuclease E activity
J5A53_06740	COG0261	This protein binds to 23S rRNA in the presence of protein L20
J5A53_06745	COG0211	Belongs to the bacterial ribosomal protein bL27 family
J5A53_06750	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
J5A53_06755	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
J5A53_06760	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
J5A53_06765	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
J5A53_06770	COG0799	negative regulation of ribosome biogenesis
J5A53_06790	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5A53_06820	COG0656	L-ascorbic acid biosynthetic process
J5A53_06850	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
J5A53_06855	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
J5A53_06860	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
J5A53_06865	COG0181	hydroxymethylbilane synthase activity
J5A53_06870	COG0113	porphobilinogen synthase activity
J5A53_06875	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J5A53_06900	COG2815	serine threonine protein kinase
J5A53_06900	COG0515	serine threonine protein kinase
J5A53_06945	COG0456	acetyltransferase
J5A53_06945	COG1214	PFAM Peptidase M22, glycoprotease
J5A53_06955	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
J5A53_06960	COG2855	membrane
J5A53_06965	COG1760	l-serine dehydratase
J5A53_06985	COG1131	(ABC) transporter
J5A53_07010	COG2814	Major facilitator Superfamily
J5A53_07015	COG0640	Transcriptional regulator
J5A53_07065	COG0277	FAD linked oxidase domain protein
J5A53_07070	COG2197	response regulator
J5A53_07075	COG3851	Histidine kinase
J5A53_07105	COG4868	Belongs to the UPF0371 family
J5A53_07110	COG0268	Binds directly to 16S ribosomal RNA
J5A53_07115	COG0481	GTPase activity
J5A53_07130	COG1175	transmembrane transport
J5A53_07145	COG2318	DinB family
J5A53_07170	COG4221	oxidoreductase activity
J5A53_07180	COG1131	(ABC) transporter
J5A53_07195	COG0483	inositol monophosphate 1-phosphatase activity
J5A53_07205	COG1420	regulation of RNA biosynthetic process
J5A53_07210	COG0484	heat shock protein binding
J5A53_07225	COG0343	queuine tRNA-ribosyltransferase activity
J5A53_07245	COG1609	Transcriptional regulator
J5A53_07260	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
J5A53_07270	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
J5A53_07275	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5A53_07280	COG1408	metallophosphoesterase
J5A53_07310	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
J5A53_07315	COG3281	Trehalose synthase
J5A53_07320	COG0366	Alpha amylase catalytic
J5A53_07340	COG0482	sulfurtransferase activity
J5A53_07365	COG2197	response regulator
J5A53_07370	COG4585	Histidine kinase
J5A53_07395	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
J5A53_07400	COG0154	amidase activity
J5A53_07405	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
J5A53_07415	COG1690	Belongs to the RtcB family
J5A53_07430	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
J5A53_07435	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
J5A53_07440	COG0134	indole-3-glycerol-phosphate synthase activity
J5A53_07445	COG0133	tryptophan synthase activity
J5A53_07450	COG0159	tryptophan synthase activity
J5A53_07460	COG0673	inositol 2-dehydrogenase activity
J5A53_07465	COG1653	transport
J5A53_07480	COG3842	ATPase activity
J5A53_07495	COG0577	efflux transmembrane transporter activity
J5A53_07495	COG1136	(ABC) transporter
J5A53_07500	COG2197	response regulator
J5A53_07515	COG0587	DNA-directed DNA polymerase activity
J5A53_07525	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
J5A53_07530	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
J5A53_07535	COG0131	Imidazoleglycerol-phosphate dehydratase
J5A53_07540	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
J5A53_07545	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
J5A53_07550	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
J5A53_07555	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
J5A53_07575	COG0456	acetyltransferase
J5A53_07580	COG0217	transcriptional regulatory protein
J5A53_07585	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
J5A53_07590	COG0632	four-way junction helicase activity
J5A53_07595	COG2255	four-way junction helicase activity
J5A53_07600	COG1862	Preprotein translocase
J5A53_07605	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J5A53_07610	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J5A53_07615	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J5A53_07625	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J5A53_07630	COG1196	nuclear chromosome segregation
J5A53_07640	COG0124	histidyl-tRNA synthetase
J5A53_07645	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
J5A53_07655	COG2814	Major facilitator Superfamily
J5A53_07675	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J5A53_07680	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
J5A53_07685	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
J5A53_07690	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J5A53_07695	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
J5A53_07700	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
J5A53_07705	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
J5A53_07710	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
J5A53_07715	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J5A53_07720	COG0505	Belongs to the CarA family
J5A53_07725	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
J5A53_07730	COG0167	dihydroorotate dehydrogenase activity
J5A53_07735	COG0284	orotidine-5'-phosphate decarboxylase activity
J5A53_07745	COG0194	GDP metabolic process
J5A53_07750	COG1758	RNA polymerase activity
J5A53_07755	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
J5A53_07765	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J5A53_07775	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
J5A53_07805	COG0646	methionine synthase
J5A53_07805	COG1410	methionine synthase
J5A53_07810	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5A53_07825	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
J5A53_07835	COG0488	(ABC) transporter
J5A53_07840	COG1160	GTP binding
J5A53_07850	COG0702	epimerase
J5A53_07865	COG1376	ErfK ybiS ycfS ynhG family protein
J5A53_07870	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
J5A53_07870	COG2111	Na H antiporter
J5A53_07875	COG1006	Multisubunit Na H antiporter MnhC subunit
J5A53_07880	COG0651	ATP synthesis coupled electron transport
J5A53_07885	COG1863	multisubunit Na H antiporter MnhE subunit
J5A53_07890	COG2212	antiporter activity
J5A53_07900	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
J5A53_07905	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
J5A53_07905	COG2813	Specifically methylates the guanine in position
J5A53_07910	COG0815	Transfers the fatty acyl group on membrane lipoproteins
J5A53_07915	COG1216	Glycosyl transferase, family 2
J5A53_07920	COG3030	protein affecting phage T7 exclusion by the F plasmid
J5A53_07935	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
J5A53_07940	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
J5A53_07950	COG1937	Protein conserved in bacteria
J5A53_07960	COG4552	Acetyltransferase involved in intracellular survival and related
J5A53_07965	COG1472	Belongs to the glycosyl hydrolase 3 family
J5A53_07975	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
J5A53_07985	COG0009	L-threonylcarbamoyladenylate synthase
J5A53_08005	COG1295	ribonuclease BN
J5A53_08025	COG1716	ATPase activity
J5A53_08055	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J5A53_08095	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5A53_08110	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
J5A53_08115	COG1113	amino acid transport
J5A53_08120	COG0686	Belongs to the AlaDH PNT family
J5A53_08125	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
J5A53_08130	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
J5A53_08135	COG0531	amino acid
J5A53_08140	COG0569	domain protein
J5A53_08160	COG0756	dUTP diphosphatase activity
J5A53_08180	COG1435	thymidine kinase activity
J5A53_08205	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J5A53_08220	COG0187	DNA topoisomerase II activity
J5A53_08240	COG1278	Cold shock
J5A53_08255	COG0513	Belongs to the DEAD box helicase family
J5A53_08260	COG0180	Tryptophanyl-tRNA synthetase
J5A53_08265	COG0613	PHP domain protein
J5A53_08285	COG0653	protein targeting
J5A53_08290	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
J5A53_08300	COG5401	PFAM Sporulation and spore germination
J5A53_08305	COG5002	protein histidine kinase activity
J5A53_08310	COG0745	RESPONSE REGULATOR receiver
J5A53_08315	COG1678	Uncharacterized ACR, COG1678
J5A53_08320	COG0366	Alpha amylase catalytic
J5A53_08335	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
J5A53_08350	COG2884	Cell division ATP-binding protein ftsE
J5A53_08355	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
J5A53_08375	COG0205	6-phosphofructokinase activity
J5A53_08385	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
J5A53_08390	COG1653	transport
J5A53_08405	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5A53_08410	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5A53_08430	COG2304	oxidoreductase activity
J5A53_08435	COG2304	oxidoreductase activity
J5A53_08445	COG0714	Associated with various cellular activities
J5A53_08530	COG0406	alpha-ribazole phosphatase activity
J5A53_08540	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J5A53_08550	COG2197	response regulator
J5A53_08555	COG4585	Histidine kinase
J5A53_08565	COG1131	(ABC) transporter
J5A53_08570	COG0232	Belongs to the dGTPase family. Type 2 subfamily
J5A53_08575	COG2197	response regulator
J5A53_08580	COG3851	Histidine kinase
J5A53_08585	COG1136	(ABC) transporter
J5A53_08605	COG0339	signal peptide processing
J5A53_08610	COG1940	carbohydrate kinase activity
J5A53_08625	COG1175	transmembrane transport
J5A53_08640	COG0803	Belongs to the bacterial solute-binding protein 9 family
J5A53_08645	COG1120	ATPase activity
J5A53_08660	COG1381	Involved in DNA repair and RecF pathway recombination
J5A53_08665	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
J5A53_08715	COG0596	Alpha beta hydrolase
J5A53_08720	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J5A53_08735	COG0355	proton-transporting ATP synthase activity, rotational mechanism
J5A53_08740	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
J5A53_08745	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
J5A53_08750	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
J5A53_08755	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J5A53_08760	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
J5A53_08765	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J5A53_08770	COG0356	it plays a direct role in the translocation of protons across the membrane
J5A53_08785	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J5A53_08795	COG2890	protein-(glutamine-N5) methyltransferase activity
J5A53_08800	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
J5A53_08805	COG0254	rRNA binding
J5A53_08815	COG0083	homoserine kinase activity
J5A53_08820	COG0460	homoserine dehydrogenase
J5A53_08855	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5A53_08855	COG0567	Dehydrogenase, E1 component
J5A53_08860	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
J5A53_08880	COG1595	DNA-templated transcription, initiation
J5A53_08890	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
J5A53_08895	COG1162	GTPase activity
J5A53_08900	COG0483	inositol monophosphate 1-phosphatase activity
J5A53_08905	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
J5A53_08920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5A53_08930	COG0747	negative chemotaxis
J5A53_08940	COG4942	peptidase
J5A53_08950	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J5A53_08955	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
J5A53_08960	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
J5A53_08970	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J5A53_08975	COG2017	converts alpha-aldose to the beta-anomer
J5A53_08980	COG1418	mRNA catabolic process
J5A53_08985	COG2137	regulation of response to DNA damage stimulus
J5A53_09010	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J5A53_09015	COG1674	ftsk spoiiie
J5A53_09020	COG3585	molybdate ion transport
J5A53_09030	COG1181	Belongs to the D-alanine--D-alanine ligase family
J5A53_09045	COG1120	ATPase activity
J5A53_09050	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_09065	COG0066	3-isopropylmalate dehydratase activity
J5A53_09070	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
J5A53_09075	COG1414	Transcriptional regulator
J5A53_09090	COG1131	(ABC) transporter
J5A53_09100	COG2197	response regulator
J5A53_09125	COG0179	Fumarylacetoacetate (FAA) hydrolase
J5A53_09130	COG0473	3-isopropylmalate dehydrogenase activity
J5A53_09145	COG1061	Type III restriction enzyme res subunit
J5A53_09150	COG0477	Major facilitator Superfamily
J5A53_09155	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
J5A53_09160	COG0440	acetolactate synthase activity
J5A53_09170	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
J5A53_09200	COG0792	nuclease activity
J5A53_09210	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J5A53_09220	COG0335	large ribosomal subunit rRNA binding
J5A53_09225	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
J5A53_09230	COG1053	succinate dehydrogenase
J5A53_09240	COG0336	Belongs to the RNA methyltransferase TrmD family
J5A53_09245	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
J5A53_09250	COG1837	Belongs to the UPF0109 family
J5A53_09255	COG0228	four-way junction DNA binding
J5A53_09265	COG0616	signal peptide processing
J5A53_09280	COG4585	Histidine kinase
J5A53_09290	COG2197	response regulator
J5A53_09300	COG0640	Transcriptional regulator
J5A53_09310	COG1196	nuclear chromosome segregation
J5A53_09320	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
J5A53_09325	COG0571	ribonuclease III activity
J5A53_09330	COG0333	Belongs to the bacterial ribosomal protein bL32 family
J5A53_09340	COG1846	Transcriptional regulator
J5A53_09345	COG0003	Pfam Anion-transporting ATPase
J5A53_09355	COG0003	Pfam Anion-transporting ATPase
J5A53_09365	COG0601	transmembrane transport
J5A53_09370	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5A53_09375	COG4172	Belongs to the ABC transporter superfamily
J5A53_09380	COG1124	(ABC) transporter
J5A53_09385	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
J5A53_09400	COG0227	Belongs to the bacterial ribosomal protein bL28 family
J5A53_09405	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J5A53_09415	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
J5A53_09420	COG1185	polyribonucleotide nucleotidyltransferase activity
J5A53_09425	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
J5A53_09435	COG1556	Lactate utilization protein
J5A53_09440	COG1139	Iron-sulfur cluster binding protein
J5A53_09445	COG0247	lactate metabolic process
J5A53_09450	COG1620	l-lactate permease
J5A53_09455	COG4106	trans-aconitate 2-methyltransferase activity
J5A53_09460	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
J5A53_09475	COG4139	cobalamin transport
J5A53_09480	COG2186	Transcriptional regulator
J5A53_09485	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
J5A53_09490	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
J5A53_09495	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
J5A53_09510	COG0195	Participates in both transcription termination and antitermination
J5A53_09515	COG0779	Required for maturation of 30S ribosomal subunits
J5A53_09525	COG0442	prolyl-tRNA aminoacylation
J5A53_09530	COG0456	acetyltransferase
J5A53_09535	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
J5A53_09550	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J5A53_09550	COG1648	precorrin-2 dehydrogenase activity
J5A53_09555	COG1797	cobyrinic acid a,c-diamide synthase activity
J5A53_09560	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
J5A53_09615	COG0310	cobalt ion transport
J5A53_09630	COG0321	lipoyl(octanoyl) transferase activity
J5A53_09635	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
J5A53_09645	COG0488	(ABC) transporter
J5A53_09650	COG2188	Transcriptional regulator
J5A53_09695	COG1309	transcriptional regulator
J5A53_09700	COG1476	TRANSCRIPTIONal
J5A53_09710	COG1131	(ABC) transporter
J5A53_09715	COG0174	glutamine synthetase
J5A53_09720	COG2409	Drug exporters of the RND superfamily
J5A53_09730	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5A53_09730	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5A53_09735	COG1063	alcohol dehydrogenase
J5A53_09740	COG1349	DNA-binding transcription factor activity
J5A53_09750	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5A53_09755	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
J5A53_09760	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5A53_09765	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5A53_09770	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
J5A53_09780	COG0174	glutamine synthetase
J5A53_09845	COG0557	exoribonuclease II activity
J5A53_09855	COG0006	proline dipeptidase activity
J5A53_09890	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J5A53_09900	COG1595	DNA-templated transcription, initiation
J5A53_09905	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J5A53_09920	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J5A53_09925	COG0297	glycogen (starch) synthase activity
J5A53_09945	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5A53_09950	COG2171	N-acyltransferase activity
J5A53_09990	COG0616	signal peptide processing
J5A53_10005	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
J5A53_10015	COG1342	Belongs to the UPF0251 family
J5A53_10050	COG3552	Protein containing von Willebrand factor type A (VWA) domain
J5A53_10060	COG0714	Associated with various cellular activities
J5A53_10085	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
J5A53_10095	COG0584	glycerophosphoryl diester phosphodiesterase
J5A53_10110	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5A53_10125	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5A53_10135	COG1131	(ABC) transporter
J5A53_10140	COG0823	Involved in the tonB-independent uptake of proteins
J5A53_10140	COG1506	peptidase
J5A53_10140	COG4946	Tricorn protease homolog
J5A53_10155	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
J5A53_10165	COG1079	Belongs to the binding-protein-dependent transport system permease family
J5A53_10170	COG4603	Belongs to the binding-protein-dependent transport system permease family
J5A53_10175	COG3845	ABC transporter
J5A53_10180	COG1744	ABC transporter substrate-binding protein PnrA-like
J5A53_10190	COG1253	flavin adenine dinucleotide binding
J5A53_10205	COG1492	cobalamin metabolic process
J5A53_10210	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
J5A53_10215	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
J5A53_10225	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
J5A53_10230	COG0750	zinc metalloprotease
J5A53_10235	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
J5A53_10240	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J5A53_10245	COG0820	rRNA (adenine-C2-)-methyltransferase activity
J5A53_10250	COG0575	Belongs to the CDS family
J5A53_10255	COG0233	cytoplasmic translational termination
J5A53_10260	COG0528	UMP kinase activity
J5A53_10265	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
J5A53_10270	COG0052	Belongs to the universal ribosomal protein uS2 family
J5A53_10275	COG1196	nuclear chromosome segregation
J5A53_10275	COG0739	heme binding
J5A53_10275	COG0741	lytic transglycosylase activity
J5A53_10280	COG4974	Belongs to the 'phage' integrase family
J5A53_10285	COG0242	peptide deformylase activity
J5A53_10315	COG0114	fumarate hydratase activity
J5A53_10320	COG1119	ATPase activity
J5A53_10330	COG1028	Short-chain dehydrogenase reductase Sdr
J5A53_10350	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5A53_10355	COG0488	(ABC) transporter
J5A53_10375	COG2267	carboxylic ester hydrolase activity
J5A53_10385	COG0822	iron-sulfur transferase activity
J5A53_10390	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
J5A53_10395	COG0396	ATPase activity
J5A53_10435	COG0363	glucosamine-6-phosphate deaminase activity
J5A53_10460	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J5A53_10465	COG0149	triose-phosphate isomerase activity
J5A53_10470	COG0126	phosphoglycerate kinase activity
J5A53_10475	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J5A53_10485	COG0391	Required for morphogenesis under gluconeogenic growth conditions
J5A53_10490	COG1660	Displays ATPase and GTPase activities
J5A53_10500	COG1122	ATPase activity
J5A53_10505	COG1268	BioY protein
J5A53_10520	COG0322	excinuclease ABC activity
J5A53_10530	COG1160	GTP binding
J5A53_10550	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
J5A53_10585	COG0252	asparaginase activity
J5A53_10630	COG1131	(ABC) transporter
J5A53_10645	COG1024	Enoyl-CoA hydratase
J5A53_10650	COG3425	synthase
J5A53_10655	COG0604	alcohol dehydrogenase
J5A53_10655	COG3321	synthase
J5A53_10660	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5A53_10660	COG0300	oxidoreductase activity
J5A53_10660	COG3321	synthase
J5A53_10660	COG4221	oxidoreductase activity
J5A53_10665	COG4221	oxidoreductase activity
J5A53_10665	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5A53_10665	COG0300	oxidoreductase activity
J5A53_10665	COG3321	synthase
J5A53_10670	COG0300	oxidoreductase activity
J5A53_10670	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5A53_10670	COG4221	oxidoreductase activity
J5A53_10670	COG3321	synthase
J5A53_10675	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5A53_10675	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5A53_10675	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5A53_10675	COG1028	Short-chain dehydrogenase reductase Sdr
J5A53_10675	COG3321	synthase
J5A53_10680	COG4221	oxidoreductase activity
J5A53_10680	COG3321	synthase
J5A53_10680	COG1028	Short-chain dehydrogenase reductase Sdr
J5A53_10680	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5A53_10685	COG1024	Enoyl-CoA hydratase
J5A53_10690	COG2070	2-Nitropropane dioxygenase
J5A53_10690	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
J5A53_10710	COG3321	synthase
J5A53_10715	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5A53_10735	COG1073	alpha beta
J5A53_10745	COG0189	ligase activity
J5A53_10755	COG0189	ligase activity
J5A53_10760	COG0246	Mannitol dehydrogenase
J5A53_10775	COG0431	NADPH-dependent FMN reductase
J5A53_10795	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
J5A53_10805	COG1053	succinate dehydrogenase
J5A53_10835	COG1739	Uncharacterized protein family UPF0029
J5A53_10855	COG0259	pyridoxamine-phosphate oxidase activity
J5A53_10865	COG1063	alcohol dehydrogenase
J5A53_10870	COG0156	8-amino-7-oxononanoate synthase activity
J5A53_10890	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J5A53_10905	COG2425	protein containing a von Willebrand factor type A (vWA) domain
J5A53_10910	COG3552	Protein containing von Willebrand factor type A (VWA) domain
J5A53_10925	COG0714	Associated with various cellular activities
J5A53_10930	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
J5A53_10935	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
J5A53_10940	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
J5A53_10945	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
J5A53_10985	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
J5A53_10995	COG2835	tetraacyldisaccharide 4'-kinase activity
J5A53_11000	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5A53_11060	COG1316	TRANSCRIPTIONal
J5A53_11070	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
J5A53_11100	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
J5A53_11110	COG0424	maF-like protein
J5A53_11155	COG4770	biotin carboxylase activity
J5A53_11160	COG1045	serine acetyltransferase
J5A53_11185	COG1070	Carbohydrate kinase
J5A53_11200	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5A53_11210	COG0191	fructose-bisphosphate aldolase activity
J5A53_11230	COG1704	LemA family
J5A53_11235	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
J5A53_11250	COG2815	serine threonine protein kinase
J5A53_11250	COG0515	serine threonine protein kinase
J5A53_11275	COG0714	Associated with various cellular activities
J5A53_11300	COG0534	Mate efflux family protein
J5A53_11305	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5A53_11310	COG1113	amino acid transport
J5A53_11325	COG5012	cobalamin binding
J5A53_11355	COG0542	response to heat
J5A53_11360	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
J5A53_11365	COG0514	ATP-dependent DNA helicase (RecQ)
J5A53_11425	COG1404	Belongs to the peptidase S8 family
J5A53_11435	COG0352	thiamine-phosphate diphosphorylase activity
J5A53_11435	COG0351	phosphomethylpyrimidine kinase
J5A53_11435	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J5A53_11440	COG0351	phosphomethylpyrimidine kinase
J5A53_11445	COG0351	phosphomethylpyrimidine kinase
J5A53_11445	COG0352	thiamine-phosphate diphosphorylase activity
J5A53_11445	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J5A53_11450	COG0574	Belongs to the PEP-utilizing enzyme family
J5A53_11450	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
J5A53_11460	COG1404	Belongs to the peptidase S8 family
J5A53_11465	COG2190	(PTS) system
J5A53_11465	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5A53_11465	COG1263	PTS System
J5A53_11510	COG3845	ABC transporter
J5A53_11515	COG4721	ABC-type cobalt transport system, permease component
J5A53_11530	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
J5A53_11535	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5A53_11570	COG1131	(ABC) transporter
J5A53_11600	COG0366	Alpha amylase catalytic
J5A53_11610	COG2986	histidine ammonia-lyase
J5A53_11620	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
J5A53_11695	COG0314	molybdopterin synthase activity
J5A53_11700	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
J5A53_11740	COG1120	ATPase activity
J5A53_11745	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_11795	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5A53_11815	COG1609	Transcriptional regulator
J5A53_11825	COG0746	molybdenum cofactor guanylyltransferase activity
J5A53_11830	COG0315	cyclic pyranopterin monophosphate synthase activity
J5A53_11860	COG1140	nitrate reductase beta subunit
J5A53_11900	COG1120	ATPase activity
J5A53_11905	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5A53_11910	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_11915	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_11935	COG1304	FMN binding
J5A53_11960	COG3048	D-serine ammonia-lyase activity
J5A53_11985	COG0604	alcohol dehydrogenase
J5A53_11995	COG0156	8-amino-7-oxononanoate synthase activity
J5A53_12005	COG0477	Major facilitator Superfamily
J5A53_12015	COG1174	glycine betaine transport
J5A53_12025	COG0517	IMP dehydrogenase activity
J5A53_12025	COG1125	glycine betaine transport
J5A53_12045	COG1013	pyruvate-flavodoxin oxidoreductase activity
J5A53_12045	COG0674	pyruvate-flavodoxin oxidoreductase activity
J5A53_12045	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
J5A53_12045	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
J5A53_12055	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5A53_12060	COG1321	iron dependent repressor
J5A53_12075	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
J5A53_12090	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
J5A53_12125	COG2252	PERMEase
J5A53_12135	COG1278	Cold shock
J5A53_12140	COG0363	glucosamine-6-phosphate deaminase activity
J5A53_12150	COG0494	nUDIX hydrolase
J5A53_12155	COG3142	Participates in the control of copper homeostasis
J5A53_12170	COG0454	-acetyltransferase
J5A53_12195	COG0275	rRNA processing
J5A53_12210	COG3842	ATPase activity
J5A53_12215	COG0626	cystathionine gamma-synthase activity
J5A53_12220	COG1882	Formate acetyltransferase
J5A53_12235	COG3541	Predicted nucleotidyltransferase
J5A53_12245	COG2226	methyltransferase
J5A53_12275	COG2132	Multicopper oxidase
J5A53_12280	COG2205	protein histidine kinase activity
J5A53_12285	COG0745	RESPONSE REGULATOR receiver
J5A53_12300	COG0215	cysteine-tRNA ligase activity
J5A53_12310	COG0698	ribose 5-phosphate isomerase
J5A53_12315	COG0789	Transcriptional regulator
J5A53_12325	COG1132	(ABC) transporter
J5A53_12325	COG2375	cellular response to nickel ion
J5A53_12335	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
J5A53_12360	COG2826	transposase and inactivated derivatives, IS30 family
J5A53_12385	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
J5A53_12390	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
J5A53_12395	COG1329	Transcriptional regulator
J5A53_12400	COG0745	RESPONSE REGULATOR receiver
J5A53_12405	COG5002	protein histidine kinase activity
J5A53_12410	COG0704	Plays a role in the regulation of phosphate uptake
J5A53_12415	COG0726	polysaccharide deacetylase
J5A53_12420	COG0588	phosphoglycerate mutase activity
J5A53_12425	COG0038	chloride channel
J5A53_12480	COG4946	Tricorn protease homolog
J5A53_12480	COG1506	peptidase
J5A53_12480	COG0823	Involved in the tonB-independent uptake of proteins
J5A53_12485	COG2755	lipolytic protein G-D-S-L family
J5A53_12485	COG0657	acetylesterase activity
J5A53_12495	COG1472	Belongs to the glycosyl hydrolase 3 family
J5A53_12505	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J5A53_12510	COG1113	amino acid transport
J5A53_12525	COG1063	alcohol dehydrogenase
J5A53_12530	COG2376	Dihydroxyacetone kinase
J5A53_12545	COG1028	Short-chain dehydrogenase reductase Sdr
J5A53_12555	COG0022	dehydrogenase e1 component
J5A53_12560	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5A53_12565	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5A53_12570	COG1349	DNA-binding transcription factor activity
J5A53_12625	COG3591	Belongs to the peptidase S1B family
J5A53_12630	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
J5A53_12650	COG1203	CRISPR-associated helicase, Cas3
J5A53_12660	COG1468	defense response to virus
J5A53_12660	COG1518	maintenance of DNA repeat elements
J5A53_12680	COG0765	amino acid transport
J5A53_12700	COG4191	Histidine kinase
J5A53_12705	COG0745	RESPONSE REGULATOR receiver
J5A53_12720	COG0095	Lipoate-protein ligase
J5A53_12730	COG2188	Transcriptional regulator
J5A53_12735	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
J5A53_12740	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
J5A53_12750	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5A53_12775	COG3831	ATPase activity
J5A53_12780	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J5A53_12785	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
J5A53_12785	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
J5A53_12810	COG0148	phosphopyruvate hydratase activity
J5A53_12820	COG2304	oxidoreductase activity
J5A53_12845	COG0193	aminoacyl-tRNA hydrolase activity
J5A53_12850	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
J5A53_12870	COG0583	DNA-binding transcription factor activity
J5A53_12880	COG2094	Belongs to the DNA glycosylase MPG family
J5A53_12895	COG1131	(ABC) transporter
J5A53_12905	COG1136	(ABC) transporter
J5A53_12905	COG0577	efflux transmembrane transporter activity
J5A53_12910	COG0577	efflux transmembrane transporter activity
J5A53_12910	COG1136	(ABC) transporter
J5A53_12925	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
J5A53_12930	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
J5A53_12950	COG0519	Catalyzes the synthesis of GMP from XMP
J5A53_12965	COG0577	efflux transmembrane transporter activity
J5A53_12965	COG1136	(ABC) transporter
J5A53_12980	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
J5A53_12985	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
J5A53_12990	COG0084	hydrolase, TatD family'
J5A53_13015	COG2233	PERMEase
J5A53_13020	COG0133	tryptophan synthase activity
J5A53_13030	COG5002	protein histidine kinase activity
J5A53_13040	COG0785	Cytochrome C biogenesis protein
J5A53_13040	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5A53_13065	COG1309	transcriptional regulator
J5A53_13070	COG2814	Major facilitator Superfamily
J5A53_13105	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
J5A53_13110	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5A53_13120	COG1331	Highly conserved protein containing a thioredoxin domain
J5A53_13135	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
J5A53_13145	COG4585	Histidine kinase
J5A53_13160	COG2161	toxin-antitoxin pair type II binding
J5A53_13165	COG4115	mRNA cleavage
J5A53_13170	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5A53_13180	COG0427	acetyl-CoA hydrolase
J5A53_13190	COG1051	belongs to the nudix hydrolase family
J5A53_13200	COG0047	phosphoribosylformylglycinamidine synthase activity
J5A53_13205	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J5A53_13220	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
J5A53_13230	COG0577	efflux transmembrane transporter activity
J5A53_13230	COG1136	(ABC) transporter
J5A53_13235	COG4585	Histidine kinase
J5A53_13240	COG2197	response regulator
J5A53_13245	COG4152	abc transporter atp-binding protein
J5A53_13250	COG1668	transmembrane transport
J5A53_13270	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
J5A53_13275	COG0151	Belongs to the GarS family
J5A53_13305	COG3189	MarR family transcriptional regulator
J5A53_13320	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
J5A53_13325	COG2376	Dihydroxyacetone kinase
J5A53_13330	COG1461	Dihydroxyacetone kinase
J5A53_13335	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
J5A53_13355	COG1217	gtp-binding protein TYPA
J5A53_13375	COG0738	Major facilitator superfamily
J5A53_13390	COG0583	DNA-binding transcription factor activity
J5A53_13405	COG2326	polyphosphate kinase activity
J5A53_13425	COG0354	folic acid binding
J5A53_13430	COG3485	protocatechuate 3,4-dioxygenase
J5A53_13435	COG1490	D-aminoacyl-tRNA deacylase activity
J5A53_13460	COG0745	RESPONSE REGULATOR receiver
J5A53_13465	COG0456	acetyltransferase
J5A53_13470	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
J5A53_13475	COG0494	nUDIX hydrolase
J5A53_13475	COG0406	alpha-ribazole phosphatase activity
J5A53_13490	COG1401	restriction endodeoxyribonuclease activity
J5A53_13505	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
J5A53_13520	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
J5A53_13535	COG1028	Short-chain dehydrogenase reductase Sdr
J5A53_13545	COG0406	alpha-ribazole phosphatase activity
J5A53_13560	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5A53_13585	COG1082	Xylose isomerase domain protein TIM barrel
J5A53_13595	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
J5A53_13600	COG2826	transposase and inactivated derivatives, IS30 family
J5A53_13615	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
J5A53_13645	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
J5A53_13650	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
J5A53_13655	COG0302	gtp cyclohydrolase
J5A53_13665	COG1252	NADH dehydrogenase
J5A53_13670	COG1595	DNA-templated transcription, initiation
J5A53_13680	COG0406	alpha-ribazole phosphatase activity
J5A53_13715	COG1132	(ABC) transporter
J5A53_13770	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J5A53_13770	COG1648	precorrin-2 dehydrogenase activity
J5A53_13790	COG1205	dead DEAH box helicase
J5A53_13790	COG1111	helicase
J5A53_13810	COG2197	response regulator
J5A53_13840	COG2226	methyltransferase
J5A53_13900	COG0577	efflux transmembrane transporter activity
J5A53_13900	COG1136	(ABC) transporter
J5A53_13905	COG0577	efflux transmembrane transporter activity
J5A53_13905	COG1136	(ABC) transporter
J5A53_13910	COG2197	response regulator
J5A53_13950	COG0494	nUDIX hydrolase
J5A53_14020	COG0561	phosphatase activity
J5A53_14025	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
J5A53_14045	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
J5A53_14055	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J5A53_14065	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5A53_14070	COG0022	dehydrogenase e1 component
J5A53_14100	COG2205	protein histidine kinase activity
J5A53_14130	COG0366	Alpha amylase catalytic
J5A53_14160	COG1940	carbohydrate kinase activity
J5A53_14165	COG0395	ABC-type sugar transport system, permease component
J5A53_14170	COG1175	transmembrane transport
J5A53_14180	COG1940	carbohydrate kinase activity
J5A53_14185	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
J5A53_14190	COG1027	Aspartate ammonia-lyase
J5A53_14200	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
J5A53_14225	COG0300	oxidoreductase activity
J5A53_14280	COG1271	oxidase subunit
J5A53_14285	COG1294	oxidase, subunit
J5A53_14315	COG4988	ABC transporter
J5A53_14320	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
J5A53_14330	COG1131	(ABC) transporter
J5A53_14335	COG4585	Histidine kinase
J5A53_14340	COG2197	response regulator
J5A53_14360	COG0477	Major facilitator Superfamily
J5A53_14365	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
J5A53_14380	COG1937	Protein conserved in bacteria
J5A53_14385	COG0305	Participates in initiation and elongation during chromosome replication
J5A53_14395	COG1129	ABC transporter
J5A53_14405	COG1122	ATPase activity
J5A53_14410	COG1132	(ABC) transporter
J5A53_14410	COG2375	cellular response to nickel ion
J5A53_14420	COG1309	transcriptional regulator
J5A53_14445	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
J5A53_14465	COG0673	inositol 2-dehydrogenase activity
J5A53_14535	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
J5A53_14545	COG0673	inositol 2-dehydrogenase activity
J5A53_14560	COG1131	(ABC) transporter
J5A53_14565	COG1136	(ABC) transporter
J5A53_14620	COG1674	ftsk spoiiie
J5A53_14655	COG3266	domain, Protein
J5A53_14660	COG1404	Belongs to the peptidase S8 family
J5A53_14690	COG0745	RESPONSE REGULATOR receiver
J5A53_14695	COG5002	protein histidine kinase activity
J5A53_14705	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J5A53_14720	COG1132	(ABC) transporter
J5A53_14725	COG0438	transferase activity, transferring glycosyl groups
J5A53_14740	COG3022	response to hydroperoxide
J5A53_14755	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5A53_14810	COG1609	Transcriptional regulator
J5A53_14815	COG1879	ABC-type sugar transport system periplasmic component
J5A53_14820	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5A53_14835	COG0673	inositol 2-dehydrogenase activity
J5A53_14840	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5A53_14860	COG1902	pentaerythritol trinitrate reductase activity
J5A53_14875	COG0456	acetyltransferase
J5A53_14900	COG0395	ABC-type sugar transport system, permease component
J5A53_14905	COG1175	transmembrane transport
J5A53_14945	COG3962	Belongs to the TPP enzyme family
J5A53_14950	COG3718	enzyme involved in inositol metabolism
J5A53_15015	COG2197	response regulator
J5A53_15020	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
J5A53_15025	COG0673	inositol 2-dehydrogenase activity
J5A53_15045	COG0667	Aldo Keto reductase
J5A53_15055	COG1309	transcriptional regulator
J5A53_15085	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5A53_15090	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5A53_15095	COG1120	ATPase activity
J5A53_15120	COG1116	anion transmembrane transporter activity
J5A53_15125	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
J5A53_15150	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
J5A53_15260	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
J5A53_15270	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5A53_15275	COG3739	integral membrane protein
J5A53_15295	COG0640	Transcriptional regulator
J5A53_15300	COG2814	Major facilitator Superfamily
J5A53_15330	COG0561	phosphatase activity
J5A53_15350	COG0316	Belongs to the HesB IscA family
J5A53_15350	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
J5A53_15385	COG1309	transcriptional regulator
J5A53_15390	COG1131	(ABC) transporter
J5A53_15410	COG0667	Aldo Keto reductase
J5A53_15420	COG1131	(ABC) transporter
J5A53_15445	COG0205	6-phosphofructokinase activity
J5A53_15450	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J5A53_15525	COG0803	Belongs to the bacterial solute-binding protein 9 family
J5A53_15530	COG1121	(ABC) transporter
J5A53_15535	COG1108	ABC-type Mn2 Zn2 transport systems permease components