Arch_0001 SM00382 ATPases associated with a variety of cellular activities Arch_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Arch_0002 SM00480 DNA polymerase III beta subunit Arch_0005 SM00387 Histidine kinase-like ATPases Arch_0005 SM00433 TopoisomeraseII Arch_0006 SM00434 DNA Topoisomerase IV Arch_0034 SM00872 Alpha mannosidase, middle domain Arch_0035 SM00354 helix_turn _helix lactose operon repressor Arch_0038 SM00829 Enoylreductase Arch_0044 SM00345 helix_turn_helix gluconate operon transcriptional repressor Arch_0044 SM00866 Arch_0044 Arch_0055 SM00382 ATPases associated with a variety of cellular activities Arch_0057 SM00812 Alpha-L-fucosidase Arch_0064 SM00020 Trypsin-like serine protease Arch_0068 SM00382 ATPases associated with a variety of cellular activities Arch_0102 SM00220 Serine/Threonine protein kinases, catalytic domain Arch_0102 SM00740 Arch_0102 Arch_0105 SM00331 Sigma factor PP2C-like phosphatases Arch_0105 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Arch_0106 SM00240 Forkhead associated domain Arch_0107 SM00240 Forkhead associated domain Arch_0109 SM00506 Appr-1"-p processing enzyme Arch_0121 SM00226 Low molecular weight phosphatase family Arch_0122 SM00731 SprT homologues. Arch_0124 SM00382 ATPases associated with a variety of cellular activities Arch_0126 SM00062 Bacterial periplasmic substrate-binding proteins Arch_0126 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Arch_0127 SM00382 ATPases associated with a variety of cellular activities Arch_0127 SM00487 DEAD-like helicases superfamily Arch_0127 SM00490 helicase superfamily c-terminal domain Arch_0127 SM00847 Helicase associated domain (HA2) Add an annotation Arch_0130 SM00345 helix_turn_helix gluconate operon transcriptional repressor Arch_0130 SM00866 Arch_0130 Arch_0143 SM00382 ATPases associated with a variety of cellular activities Arch_0146 SM00529 Helix-turn-helix diphteria tox regulatory element Arch_0146 SM00899 Arch_0146 Arch_0157 SM00382 ATPases associated with a variety of cellular activities Arch_0170 SM00271 DnaJ molecular chaperone homology domain Arch_0171 SM00422 helix_turn_helix, mercury resistance Arch_0180 SM00382 ATPases associated with a variety of cellular activities Arch_0180 SM01086 C-terminal, D2-small domain, of ClpB protein Arch_0202 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Arch_0218 SM00382 ATPases associated with a variety of cellular activities Arch_0227 SM00382 ATPases associated with a variety of cellular activities Arch_0227 SM01086 C-terminal, D2-small domain, of ClpB protein Arch_0244 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Arch_0251 SM00382 ATPases associated with a variety of cellular activities Arch_0254 SM00905 Dihydroneopterin aldolase Arch_0269 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Arch_0269 SM00478 endonuclease III Arch_0276 SM00382 ATPases associated with a variety of cellular activities Arch_0280 SM00347 helix_turn_helix multiple antibiotic resistance protein Arch_0281 SM00855 Phosphoglycerate mutase family Arch_0287 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Arch_0289 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Arch_0298 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Arch_0299 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Arch_0308 SM00957 SecA DEAD-like domain Arch_0308 SM00958 SecA preprotein cross-linking domain Arch_0313 SM00257 Lysin motif Arch_0316 SM00858 Arch_0316 Arch_0329 SM00345 helix_turn_helix gluconate operon transcriptional repressor Arch_0329 SM00895 Arch_0329 Arch_0337 SM00244 prohibitin homologues Arch_0346 SM00861 Transketolase, pyrimidine binding domain Arch_0347 SM00116 Domain in cystathionine beta-synthase and other proteins. Arch_0347 SM01091 Transporter associated domain Arch_0348 SM00116 Domain in cystathionine beta-synthase and other proteins. Arch_0351 SM00836 DALR anticodon binding domain Arch_0351 SM01016 Arginyl tRNA synthetase N terminal dom Arch_0354 SM00382 ATPases associated with a variety of cellular activities Arch_0354 SM00959 Rho termination factor, N-terminal domain Arch_0356 SM00937 Arch_0356 Arch_0367 SM00382 ATPases associated with a variety of cellular activities Arch_0377 SM00642 Alpha-amylase domain Arch_0378 SM00354 helix_turn _helix lactose operon repressor Arch_0383 SM00642 Alpha-amylase domain Arch_0385 SM00642 Alpha-amylase domain Arch_0386 SM00642 Alpha-amylase domain Arch_0391 SM00642 Alpha-amylase domain Arch_0393 SM00341 Helicase and RNase D C-terminal Arch_0400 SM00382 ATPases associated with a variety of cellular activities Arch_0401 SM00345 helix_turn_helix gluconate operon transcriptional repressor Arch_0404 SM00382 ATPases associated with a variety of cellular activities Arch_0411 SM00387 Histidine kinase-like ATPases Arch_0415 SM00421 helix_turn_helix, Lux Regulon Arch_0415 SM00448 cheY-homologous receiver domain Arch_0417 SM00292 breast cancer carboxy-terminal domain Arch_0417 SM00532 Ligase N family Arch_0418 SM00155 Phospholipase D. Active site motifs. Arch_0421 SM00845 GatB domain Arch_0422 SM00919 Malic enzyme, NAD binding domain Arch_0422 SM01274 Arch_0422 Arch_0434 SM00487 DEAD-like helicases superfamily Arch_0434 SM00490 helicase superfamily c-terminal domain Arch_0435 SM00354 helix_turn _helix lactose operon repressor Arch_0444 SM00382 ATPases associated with a variety of cellular activities Arch_0448 SM00479 Arch_0448 Arch_0452 SM00382 ATPases associated with a variety of cellular activities Arch_0457 SM00507 HNH nucleases Arch_0483 SM00382 ATPases associated with a variety of cellular activities Arch_0490 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Arch_0493 SM00852 Probable molybdopterin binding domain Arch_0497 SM00812 Alpha-L-fucosidase Arch_0505 SM00974 Arch_0505 Arch_0512 SM00507 HNH nucleases Arch_0519 SM00470 ParB-like nuclease domain Arch_0526 SM00421 helix_turn_helix, Lux Regulon Arch_0526 SM00448 cheY-homologous receiver domain Arch_0529 SM00421 helix_turn_helix, Lux Regulon Arch_0529 SM00448 cheY-homologous receiver domain Arch_0531 SM00382 ATPases associated with a variety of cellular activities Arch_0535 SM00833 Cobalamin synthesis protein cobW C-terminal domain Arch_0543 SM00382 ATPases associated with a variety of cellular activities Arch_0543 SM00994 ClpX C4-type zinc finger Arch_0543 SM01086 C-terminal, D2-small domain, of ClpB protein Arch_0544 SM00354 helix_turn _helix lactose operon repressor Arch_0551 SM00382 ATPases associated with a variety of cellular activities Arch_0552 SM00382 ATPases associated with a variety of cellular activities Arch_0555 SM00562 Arch_0555 Arch_0556 SM01120 Arch_0556 Arch_0557 SM00968 SMC proteins Flexible Hinge Domain Arch_0559 SM00382 ATPases associated with a variety of cellular activities Arch_0559 SM00962 SRP54-type protein, GTPase domain Arch_0559 SM00963 SRP54-type protein, helical bundle domain Arch_0560 SM00382 ATPases associated with a variety of cellular activities Arch_0560 SM00962 SRP54-type protein, GTPase domain Arch_0560 SM00963 SRP54-type protein, helical bundle domain Arch_0577 SM00382 ATPases associated with a variety of cellular activities Arch_0585 SM00893 Electron transfer flavoprotein domain Arch_0591 SM00530 Helix-turn-helix XRE-family like proteins Arch_0599 SM00363 S4 RNA-binding domain Arch_0624 SM00382 ATPases associated with a variety of cellular activities Arch_0626 SM00904 Riboflavin kinase Arch_0631 SM00382 ATPases associated with a variety of cellular activities Arch_0632 SM01387 Arch_0632 Arch_0633 SM00316 Ribosomal protein S1-like RNA-binding domain Arch_0633 SM00322 K homology RNA-binding domain Arch_0637 SM00849 Metallo-beta-lactamase superfamily Arch_0638 SM00382 ATPases associated with a variety of cellular activities Arch_0641 SM00448 cheY-homologous receiver domain Arch_0641 SM00862 Transcriptional regulatory protein, C terminal Arch_0642 SM00387 Histidine kinase-like ATPases Arch_0642 SM00388 His Kinase A (phosphoacceptor) domain Arch_0644 SM00382 ATPases associated with a variety of cellular activities Arch_0644 SM00843 Arch_0644 Arch_0647 SM00530 Helix-turn-helix XRE-family like proteins Arch_0649 SM00382 ATPases associated with a variety of cellular activities Arch_0651 SM00729 Elongator protein 3, MiaB family, Radical SAM Arch_0655 SM00487 DEAD-like helicases superfamily Arch_0655 SM00491 Arch_0655 Arch_0657 SM00257 Lysin motif Arch_0677 SM00864 Tubulin/FtsZ family, GTPase domain Arch_0677 SM00865 Tubulin/FtsZ family, C-terminal domain Arch_0685 SM00481 DNA polymerase alpha chain like domain Arch_0690 SM00382 ATPases associated with a variety of cellular activities Arch_0696 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Arch_0698 SM00382 ATPases associated with a variety of cellular activities Arch_0700 SM00450 Rhodanese Homology Domain Arch_0701 SM00400 zinc finger Arch_0701 SM00493 Arch_0701 Arch_0707 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Arch_0707 SM01110 Arch_0707 Arch_0716 SM00382 ATPases associated with a variety of cellular activities Arch_0717 SM00382 ATPases associated with a variety of cellular activities Arch_0729 SM01230 Arch_0729 Arch_0731 SM00855 Phosphoglycerate mutase family Arch_0732 SM01230 Arch_0732 Arch_0738 SM00382 ATPases associated with a variety of cellular activities Arch_0750 SM00465 GIY-YIG type nucleases (URI domain) Arch_0750 SM00479 Arch_0750 Arch_0754 SM00220 Serine/Threonine protein kinases, catalytic domain Arch_0754 SM00740 Arch_0754 Arch_0755 SM00257 Lysin motif Arch_0761 SM00479 Arch_0761 Arch_0763 SM00387 Histidine kinase-like ATPases Arch_0763 SM00433 TopoisomeraseII Arch_0766 SM00434 DNA Topoisomerase IV Arch_0782 SM00487 DEAD-like helicases superfamily Arch_0782 SM00490 helicase superfamily c-terminal domain Arch_0789 SM00382 ATPases associated with a variety of cellular activities Arch_0791 SM01001 AIR carboxylase Arch_0797 SM00861 Transketolase, pyrimidine binding domain Arch_0798 SM00341 Helicase and RNase D C-terminal Arch_0798 SM00474 3'-5' exonuclease Arch_0800 SM00642 Alpha-amylase domain Arch_0801 SM00642 Alpha-amylase domain Arch_0802 SM00642 Alpha-amylase domain Arch_0810 SM00382 ATPases associated with a variety of cellular activities Arch_0813 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Arch_0822 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Arch_0823 SM00382 ATPases associated with a variety of cellular activities Arch_0824 SM01323 Arch_0824 Arch_0828 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Arch_0828 SM00954 Region found in RelA / SpoT proteins Arch_0831 SM00849 Metallo-beta-lactamase superfamily Arch_0835 SM00487 DEAD-like helicases superfamily Arch_0835 SM00490 helicase superfamily c-terminal domain Arch_0840 SM00382 ATPases associated with a variety of cellular activities Arch_0841 SM00363 S4 RNA-binding domain Arch_0841 SM01390 Arch_0841 Arch_0842 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Arch_0843 SM00732 Likely ribonuclease with RNase H fold. Arch_0850 SM00841 Elongation factor P, C-terminal Arch_0850 SM01185 Arch_0850 Arch_0853 SM00072 Guanylate kinase homologues. Arch_0854 SM01409 Arch_0854 Arch_0866 SM00487 DEAD-like helicases superfamily Arch_0866 SM00490 helicase superfamily c-terminal domain Arch_0866 SM01142 Arch_0866 Arch_0869 SM00422 helix_turn_helix, mercury resistance Arch_0870 SM00422 helix_turn_helix, mercury resistance Arch_0871 SM00240 Forkhead associated domain Arch_0873 SM00382 ATPases associated with a variety of cellular activities Arch_0875 SM00363 S4 RNA-binding domain Arch_0880 SM00861 Transketolase, pyrimidine binding domain Arch_0884 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Arch_0892 SM00487 DEAD-like helicases superfamily Arch_0892 SM00490 helicase superfamily c-terminal domain Arch_0894 SM00316 Ribosomal protein S1-like RNA-binding domain Arch_0896 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Arch_0896 SM00475 5'-3' exonuclease Arch_0896 SM00482 DNA polymerase A domain Arch_0898 SM00448 cheY-homologous receiver domain Arch_0898 SM01012 Arch_0898 Arch_0905 SM00382 ATPases associated with a variety of cellular activities Arch_0922 SM00530 Helix-turn-helix XRE-family like proteins Arch_0924 SM00244 prohibitin homologues Arch_0926 SM00382 ATPases associated with a variety of cellular activities Arch_0929 SM00382 ATPases associated with a variety of cellular activities Arch_0934 SM00382 ATPases associated with a variety of cellular activities Arch_0946 SM00363 S4 RNA-binding domain Arch_0956 SM00873 B3/4 domain Arch_0956 SM00874 tRNA synthetase B5 domain Arch_0956 SM00896 Ferredoxin-fold anticodon binding domain Arch_0959 SM01130 Arch_0959 Arch_0960 SM00382 ATPases associated with a variety of cellular activities Arch_0961 SM00382 ATPases associated with a variety of cellular activities Arch_0964 SM00967 RNA 2'-O ribose methyltransferase substrate binding Arch_0974 SM00116 Domain in cystathionine beta-synthase and other proteins. Arch_0974 SM01091 Transporter associated domain Arch_0978 SM00271 DnaJ molecular chaperone homology domain Arch_0986 SM00729 Elongator protein 3, MiaB family, Radical SAM Arch_0988 SM00838 Elongation factor G C-terminus Arch_0994 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Arch_0994 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Arch_0997 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Arch_1002 SM00756 Arch_1002 Arch_1006 SM00382 ATPases associated with a variety of cellular activities Arch_1021 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Arch_1024 SM00851 MGS-like domain Arch_1024 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Arch_1054 SM00487 DEAD-like helicases superfamily Arch_1063 SM00855 Phosphoglycerate mutase family Arch_1072 SM00316 Ribosomal protein S1-like RNA-binding domain Arch_1075 SM00382 ATPases associated with a variety of cellular activities Arch_1076 SM00382 ATPases associated with a variety of cellular activities Arch_1077 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Arch_1077 SM00387 Histidine kinase-like ATPases Arch_1078 SM00421 helix_turn_helix, Lux Regulon Arch_1078 SM00448 cheY-homologous receiver domain Arch_1079 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Arch_1079 SM01232 Arch_1079 Arch_1080 SM00358 Double-stranded RNA binding motif Arch_1080 SM00535 Ribonuclease III family Arch_1085 SM00487 DEAD-like helicases superfamily Arch_1085 SM00490 helicase superfamily c-terminal domain Arch_1087 SM00382 ATPases associated with a variety of cellular activities Arch_1093 SM00563 Phosphate acyltransferases Arch_1095 SM00346 helix_turn_helix isocitrate lyase regulation Arch_1117 SM00487 DEAD-like helicases superfamily Arch_1119 SM00411 bacterial (prokaryotic) histone like domain Arch_1123 SM01120 Arch_1123 Arch_1127 SM00382 ATPases associated with a variety of cellular activities Arch_1130 SM00448 cheY-homologous receiver domain Arch_1130 SM00862 Transcriptional regulatory protein, C terminal Arch_1131 SM00387 Histidine kinase-like ATPases Arch_1131 SM00388 His Kinase A (phosphoacceptor) domain Arch_1142 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Arch_1144 SM00382 ATPases associated with a variety of cellular activities Arch_1149 SM00345 helix_turn_helix gluconate operon transcriptional repressor Arch_1150 SM00382 ATPases associated with a variety of cellular activities Arch_1152 SM00382 ATPases associated with a variety of cellular activities Arch_1154 SM00062 Bacterial periplasmic substrate-binding proteins Arch_1162 SM00900 Arch_1162 Arch_1177 SM00998 Adenylosuccinate lyase C-terminus Arch_1178 SM00788 Adenylosuccinate synthetase Arch_1179 SM00116 Domain in cystathionine beta-synthase and other proteins. Arch_1179 SM01240 Arch_1179 Arch_1181 SM00382 ATPases associated with a variety of cellular activities Arch_1182 SM00382 ATPases associated with a variety of cellular activities Arch_1183 SM00382 ATPases associated with a variety of cellular activities Arch_1187 SM00422 helix_turn_helix, mercury resistance Arch_1189 SM00530 Helix-turn-helix XRE-family like proteins Arch_1214 SM00857 Resolvase, N terminal domain Arch_1220 SM00382 ATPases associated with a variety of cellular activities Arch_1221 SM00937 Arch_1221 Arch_1234 SM00487 DEAD-like helicases superfamily Arch_1234 SM00490 helicase superfamily c-terminal domain Arch_1236 SM00481 DNA polymerase alpha chain like domain Arch_1237 SM01011 Aminopeptidase P, N-terminal domain Arch_1238 SM00924 MgtE intracellular N domain Arch_1245 SM00382 ATPases associated with a variety of cellular activities Arch_1247 SM00852 Probable molybdopterin binding domain Arch_1249 SM00852 Probable molybdopterin binding domain Arch_1251 SM00729 Elongator protein 3, MiaB family, Radical SAM Arch_1256 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Arch_1264 SM01133 Arch_1264 Arch_1266 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Arch_1270 SM00382 ATPases associated with a variety of cellular activities Arch_1281 SM01266 Arch_1281 Arch_1282 SM00421 helix_turn_helix, Lux Regulon Arch_1282 SM00448 cheY-homologous receiver domain Arch_1290 SM00642 Alpha-amylase domain Arch_1295 SM00881 CoA binding domain Arch_1313 SM00530 Helix-turn-helix XRE-family like proteins Arch_1320 SM01240 Arch_1320 Arch_1321 SM00479 Arch_1321 Arch_1325 SM01240 Arch_1325 Arch_1327 SM00883 Chaperonin 10 Kd subunit Arch_1337 SM01005 Alanine racemase, C-terminal domain Arch_1348 SM00662 RNA polymerases D Arch_1352 SM00316 Ribosomal protein S1-like RNA-binding domain Arch_1356 SM00893 Electron transfer flavoprotein domain Arch_1358 SM00849 Metallo-beta-lactamase superfamily Arch_1377 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Arch_1378 SM01374 Arch_1378 Arch_1382 SM00322 K homology RNA-binding domain Arch_1385 SM01382 Arch_1385 Arch_1385 SM01383 Arch_1385 Arch_1389 SM01403 Arch_1389 Arch_1391 SM00838 Elongation factor G C-terminus Arch_1391 SM00889 Elongation factor G, domain IV Arch_1395 SM00663 RNA polymerase I subunit A N-terminus Arch_1401 SM00649 Ribosomal protein L11/L12 Arch_1402 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Arch_1417 SM00909 Sporulation and spore germination Arch_1418 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Arch_1418 SM00387 Histidine kinase-like ATPases Arch_1418 SM00388 His Kinase A (phosphoacceptor) domain Arch_1419 SM00448 cheY-homologous receiver domain Arch_1419 SM00862 Transcriptional regulatory protein, C terminal Arch_1428 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Arch_1428 SM00387 Histidine kinase-like ATPases Arch_1428 SM00388 His Kinase A (phosphoacceptor) domain Arch_1429 SM00448 cheY-homologous receiver domain Arch_1429 SM00862 Transcriptional regulatory protein, C terminal Arch_1437 SM00838 Elongation factor G C-terminus Arch_1439 SM00382 ATPases associated with a variety of cellular activities Arch_1442 SM00382 ATPases associated with a variety of cellular activities Arch_1446 SM00729 Elongator protein 3, MiaB family, Radical SAM Arch_1459 SM01061 CAT RNA binding domain Arch_1463 SM00450 Rhodanese Homology Domain Arch_1473 SM00028 Tetratricopeptide repeats Arch_1477 SM01007 Class II Aldolase and Adducin N-terminal domain Arch_1478 SM00354 helix_turn _helix lactose operon repressor Arch_1488 SM00354 helix_turn _helix lactose operon repressor Arch_1497 SM00530 Helix-turn-helix XRE-family like proteins Arch_1509 SM00382 ATPases associated with a variety of cellular activities Arch_1516 SM01192 Arch_1516 Arch_1516 SM01193 Arch_1516 Arch_1517 SM00487 DEAD-like helicases superfamily Arch_1517 SM00490 helicase superfamily c-terminal domain Arch_1517 SM00982 Arch_1517 Arch_1517 SM01058 CarD-like/TRCF domain Arch_1520 SM01400 Arch_1520 Arch_1523 SM00382 ATPases associated with a variety of cellular activities Arch_1527 SM00382 ATPases associated with a variety of cellular activities Arch_1551 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Arch_1553 SM00226 Low molecular weight phosphatase family Arch_1557 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Arch_1573 SM00382 ATPases associated with a variety of cellular activities Arch_1574 SM00382 ATPases associated with a variety of cellular activities Arch_1575 SM00382 ATPases associated with a variety of cellular activities Arch_1577 SM00857 Resolvase, N terminal domain Arch_1578 SM00857 Resolvase, N terminal domain Arch_1585 SM00347 helix_turn_helix multiple antibiotic resistance protein Arch_1586 SM00382 ATPases associated with a variety of cellular activities Arch_1590 SM01061 CAT RNA binding domain Arch_1591 SM00650 Ribosomal RNA adenine dimethylases Arch_1592 SM01208 Arch_1592 Arch_1601 SM00382 ATPases associated with a variety of cellular activities Arch_1604 SM00421 helix_turn_helix, Lux Regulon Arch_1604 SM00448 cheY-homologous receiver domain Arch_1609 SM00852 Probable molybdopterin binding domain Arch_1611 SM00858 Arch_1611 Arch_1615 SM00450 Rhodanese Homology Domain Arch_1618 SM00529 Helix-turn-helix diphteria tox regulatory element Arch_1618 SM00899 Arch_1618 Arch_1622 SM00357 Cold shock protein domain Arch_1626 SM00448 cheY-homologous receiver domain Arch_1626 SM00862 Transcriptional regulatory protein, C terminal Arch_1627 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Arch_1627 SM00387 Histidine kinase-like ATPases Arch_1627 SM00388 His Kinase A (phosphoacceptor) domain Arch_1628 SM00563 Phosphate acyltransferases Arch_1634 SM00986 Uracil DNA glycosylase superfamily Arch_1634 SM00987 UreE urease accessory protein, C-terminal domain Arch_1642 SM00220 Serine/Threonine protein kinases, catalytic domain Arch_1643 SM00382 ATPases associated with a variety of cellular activities Arch_1645 SM00493 Arch_1645 Arch_1646 SM00382 ATPases associated with a variety of cellular activities Arch_1656 SM01022 Arch_1656 Arch_1658 SM00967 RNA 2'-O ribose methyltransferase substrate binding Arch_1659 SM00840 Arch_1659 Arch_1663 SM01058 CarD-like/TRCF domain Arch_1664 SM00448 cheY-homologous receiver domain Arch_1664 SM00862 Transcriptional regulatory protein, C terminal Arch_1665 SM00387 Histidine kinase-like ATPases Arch_1665 SM00388 His Kinase A (phosphoacceptor) domain Arch_1667 SM00855 Phosphoglycerate mutase family Arch_1670 SM00450 Rhodanese Homology Domain Arch_1675 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Arch_1704 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Arch_1704 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Arch_1704 SM00493 Arch_1704 Arch_1708 SM00487 DEAD-like helicases superfamily Arch_1708 SM00490 helicase superfamily c-terminal domain Arch_1721 SM00478 endonuclease III Arch_1721 SM00525 Arch_1721 Arch_1722 SM00100 Cyclic nucleotide-monophosphate binding domain Arch_1722 SM00419 helix_turn_helix, cAMP Regulatory protein Arch_1734 SM00191 Integrin alpha (beta-propellor repeats). Arch_1735 SM00191 Integrin alpha (beta-propellor repeats). Arch_1749 SM00421 helix_turn_helix, Lux Regulon Arch_1760 SM01101 Arch_1760 Arch_1761 SM00487 DEAD-like helicases superfamily Arch_1761 SM00490 helicase superfamily c-terminal domain Arch_1767 SM00345 helix_turn_helix gluconate operon transcriptional repressor Arch_1767 SM00866 Arch_1767 Arch_1783 SM00487 DEAD-like helicases superfamily Arch_1783 SM00490 helicase superfamily c-terminal domain Arch_1791 SM00563 Phosphate acyltransferases Arch_1793 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Arch_1794 SM00382 ATPases associated with a variety of cellular activities Arch_1806 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Arch_1813 SM00470 ParB-like nuclease domain Arch_1817 SM00393 Putative single-stranded nucleic acids-binding domain Arch_1819 SM01234 Arch_1819 Arch_R0043 SM00382 ATPases associated with a variety of cellular activities