locus-tag	class	description
AF_0004	GO:0055072	iron ion homeostasis
AF_0004	GO:0006811	ion transport
AF_0004	GO:0016887	ATPase activity
AF_0004	GO:0005524	ATP binding
AF_0004	GO:0005886	plasma membrane
AF_0006	GO:0015948	methanogenesis
AF_0006	GO:0006730	one-carbon metabolic process
AF_0006	GO:0031419	cobalamin binding
AF_0006	GO:0050897	cobalt ion binding
AF_0009	GO:0008168	methyltransferase activity
AF_0009	GO:0032259	methylation
AF_0009	GO:0006730	one-carbon metabolic process
AF_0011	GO:0015948	methanogenesis
AF_0011	GO:0006730	one-carbon metabolic process
AF_0011	GO:0050897	cobalt ion binding
AF_0011	GO:0031419	cobalamin binding
AF_0017	GO:0019605	butyrate metabolic process
AF_0017	GO:0070403	NAD+ binding
AF_0017	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity
AF_0017	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_0018	GO:0042952	beta-ketoadipate pathway
AF_0018	GO:0033812	3-oxoadipyl-CoA thiolase activity
AF_0018	GO:0019619	3,4-dihydroxybenzoate catabolic process
AF_0020	GO:0030573	bile acid catabolic process
AF_0020	GO:0008410	CoA-transferase activity
AF_0021	GO:0000155	phosphorelay sensor kinase activity
AF_0021	GO:0016021	integral component of membrane
AF_0021	GO:0005524	ATP binding
AF_0021	GO:0005886	plasma membrane
AF_0021	GO:0006355	regulation of transcription, DNA-templated
AF_0023	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0023	GO:0009055	electron transfer activity
AF_0023	GO:0051536	iron-sulfur cluster binding
AF_0023	GO:0046872	metal ion binding
AF_0023	GO:0043546	molybdopterin cofactor binding
AF_0023	GO:0016625	oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
AF_0024	GO:0016491	oxidoreductase activity
AF_0024	GO:0046872	metal ion binding
AF_0033	GO:0006633	fatty acid biosynthetic process
AF_0033	GO:0033818	beta-ketoacyl-acyl-carrier-protein synthase III activity
AF_0033	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity
AF_0033	GO:0005737	cytoplasm
AF_0034	GO:0033812	3-oxoadipyl-CoA thiolase activity
AF_0034	GO:0019619	3,4-dihydroxybenzoate catabolic process
AF_0034	GO:0042952	beta-ketoadipate pathway
AF_0035	GO:0000032	cell wall mannoprotein biosynthetic process
AF_0035	GO:0006486	protein glycosylation
AF_0035	GO:0009298	GDP-mannose biosynthetic process
AF_0035	GO:0005829	cytosol
AF_0035	GO:0004476	mannose-6-phosphate isomerase activity
AF_0035	GO:0008270	zinc ion binding
AF_0035	GO:0005975	carbohydrate metabolic process
AF_0036	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
AF_0036	GO:0005737	cytoplasm
AF_0036	GO:0030091	protein repair
AF_0037	GO:0009236	cobalamin biosynthetic process
AF_0037	GO:0051073	adenosylcobinamide-GDP ribazoletransferase activity
AF_0037	GO:0005886	plasma membrane
AF_0037	GO:0016021	integral component of membrane
AF_0037	GO:0008818	cobalamin 5'-phosphate synthase activity
AF_0038	GO:0010125	mycothiol biosynthetic process
AF_0038	GO:0102710	D-inositol-3-phosphate glycosyltransferase activity
AF_0038	GO:0008375	acetylglucosaminyltransferase activity
AF_0038	GO:0000287	magnesium ion binding
AF_0039	GO:0047267	undecaprenyl-phosphate mannosyltransferase activity
AF_0039	GO:0004582	dolichyl-phosphate beta-D-mannosyltransferase activity
AF_0041	GO:0016887	ATPase activity
AF_0041	GO:0005524	ATP binding
AF_0043	GO:0016757	transferase activity, transferring glycosyl groups
AF_0043	GO:0009244	lipopolysaccharide core region biosynthetic process
AF_0044	GO:0009243	O antigen biosynthetic process
AF_0044	GO:0070401	NADP+ binding
AF_0044	GO:0042351	'de novo' GDP-L-fucose biosynthetic process
AF_0044	GO:0019673	GDP-mannose metabolic process
AF_0044	GO:0008446	GDP-mannose 4,6-dehydratase activity
AF_0050	GO:0005524	ATP binding
AF_0050	GO:0000287	magnesium ion binding
AF_0050	GO:0004478	methionine adenosyltransferase activity
AF_0050	GO:0006730	one-carbon metabolic process
AF_0050	GO:0006556	S-adenosylmethionine biosynthetic process
AF_0051	GO:0019877	diaminopimelate biosynthetic process
AF_0051	GO:0008270	zinc ion binding
AF_0051	GO:0009014	succinyl-diaminopimelate desuccinylase activity
AF_0051	GO:0050897	cobalt ion binding
AF_0051	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0061	GO:0005524	ATP binding
AF_0061	GO:0006233	dTDP biosynthetic process
AF_0061	GO:0006235	dTTP biosynthetic process
AF_0061	GO:0004798	thymidylate kinase activity
AF_0071	GO:0051607	defense response to virus
AF_0071	GO:0003676	nucleic acid binding
AF_0071	GO:0046872	metal ion binding
AF_0071	GO:0004386	helicase activity
AF_0071	GO:0004536	deoxyribonuclease activity
AF_0071	GO:0005524	ATP binding
AF_0074	GO:0006355	regulation of transcription, DNA-templated
AF_0074	GO:0009305	protein biotinylation
AF_0074	GO:0003677	DNA binding
AF_0074	GO:0004077	biotin-[acetyl-CoA-carboxylase] ligase activity
AF_0074	GO:0005524	ATP binding
AF_0074	GO:0005737	cytoplasm
AF_0076	GO:0046872	metal ion binding
AF_0076	GO:0055114	oxidation-reduction process
AF_0076	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0080	GO:0005737	cytoplasm
AF_0080	GO:0003992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AF_0080	GO:0030170	pyridoxal phosphate binding
AF_0080	GO:0006526	arginine biosynthetic process
AF_0086	GO:0006790	sulfur compound metabolic process
AF_0086	GO:0005886	plasma membrane
AF_0086	GO:0005887	integral component of plasma membrane
AF_0086	GO:0022857	transmembrane transporter activity
AF_0086	GO:0042918	alkanesulfonate transport
AF_0086	GO:0042959	alkanesulfonate transmembrane transporter activity
AF_0087	GO:0016887	ATPase activity
AF_0087	GO:0005524	ATP binding
AF_0087	GO:0005886	plasma membrane
AF_0087	GO:0008509	anion transmembrane transporter activity
AF_0088	GO:0016887	ATPase activity
AF_0088	GO:0015112	nitrate transmembrane transporter activity
AF_0088	GO:0005524	ATP binding
AF_0088	GO:0005886	plasma membrane
AF_0089	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_0089	GO:0102391	decanoate-CoA ligase activity
AF_0089	GO:0005524	ATP binding
AF_0089	GO:0006635	fatty acid beta-oxidation
AF_0091	GO:0003824	catalytic activity
AF_0091	GO:0046872	metal ion binding
AF_0092	GO:0015594	ATPase-coupled putrescine transmembrane transporter activity
AF_0092	GO:0016887	ATPase activity
AF_0092	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_0092	GO:0015595	ATPase-coupled spermidine transmembrane transporter activity
AF_0092	GO:0005524	ATP binding
AF_0093	GO:0016021	integral component of membrane
AF_0093	GO:0005886	plasma membrane
AF_0093	GO:0015098	molybdate ion transmembrane transporter activity
AF_0094	GO:1901359	tungstate binding
AF_0106	GO:0004070	aspartate carbamoyltransferase activity
AF_0106	GO:0006520	cellular amino acid metabolic process
AF_0106	GO:0016597	amino acid binding
AF_0106	GO:0044205	'de novo' UMP biosynthetic process
AF_0106	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
AF_0107	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
AF_0107	GO:0046872	metal ion binding
AF_0107	GO:0006221	pyrimidine nucleotide biosynthetic process
AF_0107	GO:0009347	aspartate carbamoyltransferase complex
AF_0108	GO:0016836	hydro-lyase activity
AF_0108	GO:0016744	transferase activity, transferring aldehyde or ketonic groups
AF_0108	GO:0009073	aromatic amino acid family biosynthetic process
AF_0108	GO:0004332	fructose-bisphosphate aldolase activity
AF_0110	GO:0006432	phenylalanyl-tRNA aminoacylation
AF_0110	GO:0000049	tRNA binding
AF_0110	GO:0005737	cytoplasm
AF_0110	GO:0004826	phenylalanine-tRNA ligase activity
AF_0110	GO:0000287	magnesium ion binding
AF_0110	GO:0005524	ATP binding
AF_0112	GO:0008270	zinc ion binding
AF_0112	GO:0016740	transferase activity
AF_0112	GO:0070403	NAD+ binding
AF_0112	GO:0005737	cytoplasm
AF_0112	GO:0017136	NAD-dependent histone deacetylase activity
AF_0115	GO:0006807	nitrogen compound metabolic process
AF_0115	GO:0106008	2-oxoglutaramate amidase activity
AF_0129	GO:0005737	cytoplasm
AF_0129	GO:0043737	deoxyribonuclease V activity
AF_0129	GO:0000287	magnesium ion binding
AF_0129	GO:0006281	DNA repair
AF_0130	GO:0016787	hydrolase activity
AF_0130	GO:0046872	metal ion binding
AF_0131	GO:0005737	cytoplasm
AF_0131	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
AF_0140	GO:0102094	S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
AF_0140	GO:0102955	S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
AF_0140	GO:0043770	demethylmenaquinone methyltransferase activity
AF_0140	GO:0009060	aerobic respiration
AF_0140	GO:0043333	2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
AF_0140	GO:0006744	ubiquinone biosynthetic process
AF_0140	GO:0102027	S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
AF_0140	GO:0032259	methylation
AF_0140	GO:0009234	menaquinone biosynthetic process
AF_0152	GO:0006825	copper ion transport
AF_0152	GO:0005886	plasma membrane
AF_0152	GO:0005524	ATP binding
AF_0152	GO:0046872	metal ion binding
AF_0152	GO:0019829	ATPase-coupled cation transmembrane transporter activity
AF_0152	GO:0016021	integral component of membrane
AF_0154	GO:0033573	high-affinity iron permease complex
AF_0154	GO:0015093	ferrous iron transmembrane transporter activity
AF_0154	GO:0034755	iron ion transmembrane transport
AF_0154	GO:0055072	iron ion homeostasis
AF_0154	GO:0005886	plasma membrane
AF_0156	GO:0009055	electron transfer activity
AF_0156	GO:0046872	metal ion binding
AF_0156	GO:0005886	plasma membrane
AF_0156	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0157	GO:0016491	oxidoreductase activity
AF_0157	GO:0046872	metal ion binding
AF_0157	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0159	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0159	GO:0043546	molybdopterin cofactor binding
AF_0159	GO:0046872	metal ion binding
AF_0159	GO:0042597	periplasmic space
AF_0159	GO:0016491	oxidoreductase activity
AF_0159	GO:0045272	plasma membrane respiratory chain complex I
AF_0159	GO:0045333	cellular respiration
AF_0161	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_0161	GO:0061599	molybdopterin molybdotransferase activity
AF_0161	GO:0032324	molybdopterin cofactor biosynthetic process
AF_0161	GO:0046872	metal ion binding
AF_0164	GO:0009337	sulfite reductase complex (NADPH)
AF_0164	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0164	GO:0046872	metal ion binding
AF_0164	GO:0050661	NADP binding
AF_0164	GO:0004783	sulfite reductase (NADPH) activity
AF_0164	GO:0019344	cysteine biosynthetic process
AF_0164	GO:0070814	hydrogen sulfide biosynthetic process
AF_0164	GO:0020037	heme binding
AF_0164	GO:0000103	sulfate assimilation
AF_0166	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0166	GO:0009055	electron transfer activity
AF_0166	GO:0005506	iron ion binding
AF_0167	GO:0046872	metal ion binding
AF_0167	GO:0009055	electron transfer activity
AF_0167	GO:0010181	FMN binding
AF_0171	GO:0016491	oxidoreductase activity
AF_0171	GO:0046872	metal ion binding
AF_0175	GO:0046872	metal ion binding
AF_0175	GO:0042597	periplasmic space
AF_0175	GO:0055114	oxidation-reduction process
AF_0175	GO:0005886	plasma membrane
AF_0175	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0176	GO:0042597	periplasmic space
AF_0176	GO:0016491	oxidoreductase activity
AF_0176	GO:0043546	molybdopterin cofactor binding
AF_0176	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0176	GO:0046872	metal ion binding
AF_0185	GO:0008198	ferrous iron binding
AF_0185	GO:0006879	cellular iron ion homeostasis
AF_0185	GO:0016226	iron-sulfur cluster assembly
AF_0185	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0185	GO:0051537	2 iron, 2 sulfur cluster binding
AF_0185	GO:0005737	cytoplasm
AF_0186	GO:0031071	cysteine desulfurase activity
AF_0186	GO:0006520	cellular amino acid metabolic process
AF_0186	GO:0005737	cytoplasm
AF_0186	GO:0046872	metal ion binding
AF_0186	GO:0030170	pyridoxal phosphate binding
AF_0186	GO:0051537	2 iron, 2 sulfur cluster binding
AF_0186	GO:0044571	[2Fe-2S] cluster assembly
AF_0188	GO:0097163	sulfur carrier activity
AF_0188	GO:0002143	tRNA wobble position uridine thiolation
AF_0188	GO:0005737	cytoplasm
AF_0191	GO:0006825	copper ion transport
AF_0191	GO:0005385	zinc ion transmembrane transporter activity
AF_0191	GO:0015086	cadmium ion transmembrane transporter activity
AF_0191	GO:0005524	ATP binding
AF_0191	GO:0005886	plasma membrane
AF_0191	GO:0016021	integral component of membrane
AF_0191	GO:0006824	cobalt ion transport
AF_0191	GO:0016463	zinc transmembrane transporter activity, phosphorylative mechanism
AF_0191	GO:0046686	response to cadmium ion
AF_0191	GO:0046872	metal ion binding
AF_0192	GO:0006829	zinc ion transport
AF_0192	GO:0016887	ATPase activity
AF_0192	GO:0015692	lead ion transport
AF_0192	GO:0015086	cadmium ion transmembrane transporter activity
AF_0192	GO:0006824	cobalt ion transport
AF_0192	GO:0016463	zinc transmembrane transporter activity, phosphorylative mechanism
AF_0192	GO:0015094	lead ion transmembrane transporter activity
AF_0192	GO:0046872	metal ion binding
AF_0192	GO:0015099	nickel cation transmembrane transporter activity
AF_0192	GO:0005385	zinc ion transmembrane transporter activity
AF_0192	GO:0046686	response to cadmium ion
AF_0192	GO:0010312	detoxification of zinc ion
AF_0192	GO:0008551	cadmium transmembrane transporter activity, phosphorylative mechanism
AF_0192	GO:0005524	ATP binding
AF_0192	GO:0005886	plasma membrane
AF_0192	GO:0015087	cobalt ion transmembrane transporter activity
AF_0192	GO:0016021	integral component of membrane
AF_0196	GO:0005524	ATP binding
AF_0196	GO:0046872	metal ion binding
AF_0196	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_0196	GO:0102391	decanoate-CoA ligase activity
AF_0197	GO:0006629	lipid metabolic process
AF_0197	GO:0030729	acetoacetate-CoA ligase activity
AF_0197	GO:0046872	metal ion binding
AF_0197	GO:0005524	ATP binding
AF_0198	GO:0010124	phenylacetate catabolic process
AF_0198	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
AF_0198	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
AF_0198	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
AF_0198	GO:0016803	ether hydrolase activity
AF_0198	GO:0004300	enoyl-CoA hydratase activity
AF_0199	GO:0050660	flavin adenine dinucleotide binding
AF_0199	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
AF_0200	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_0200	GO:0102391	decanoate-CoA ligase activity
AF_0200	GO:0016405	CoA-ligase activity
AF_0200	GO:0005524	ATP binding
AF_0205	GO:0005737	cytoplasm
AF_0205	GO:0008276	protein methyltransferase activity
AF_0208	GO:0016021	integral component of membrane
AF_0208	GO:0005886	plasma membrane
AF_0208	GO:0005524	ATP binding
AF_0208	GO:0000155	phosphorelay sensor kinase activity
AF_0209	GO:0005737	cytoplasm
AF_0209	GO:0006744	ubiquinone biosynthetic process
AF_0209	GO:0016831	carboxy-lyase activity
AF_0209	GO:0008694	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AF_0209	GO:0005829	cytosol
AF_0211	GO:0015095	magnesium ion transmembrane transporter activity
AF_0211	GO:0042802	identical protein binding
AF_0211	GO:0016021	integral component of membrane
AF_0211	GO:0000287	magnesium ion binding
AF_0211	GO:0005886	plasma membrane
AF_0211	GO:0015693	magnesium ion transport
AF_0211	GO:0042803	protein homodimerization activity
AF_0212	GO:0000105	histidine biosynthetic process
AF_0212	GO:0008270	zinc ion binding
AF_0212	GO:0051287	NAD binding
AF_0212	GO:0004399	histidinol dehydrogenase activity
AF_0216	GO:0008276	protein methyltransferase activity
AF_0216	GO:0005737	cytoplasm
AF_0217	GO:0015299	solute:proton antiporter activity
AF_0217	GO:0006813	potassium ion transport
AF_0217	GO:0005886	plasma membrane
AF_0217	GO:0016021	integral component of membrane
AF_0219	GO:0009098	leucine biosynthetic process
AF_0219	GO:0003852	2-isopropylmalate synthase activity
AF_0219	GO:0005829	cytosol
AF_0220	GO:2001295	malonyl-CoA biosynthetic process
AF_0220	GO:0006633	fatty acid biosynthetic process
AF_0220	GO:0004075	biotin carboxylase activity
AF_0220	GO:0046872	metal ion binding
AF_0220	GO:0003989	acetyl-CoA carboxylase activity
AF_0220	GO:0005524	ATP binding
AF_0221	GO:0005524	ATP binding
AF_0221	GO:0016887	ATPase activity
AF_0221	GO:0015658	branched-chain amino acid transmembrane transporter activity
AF_0222	GO:0006865	amino acid transport
AF_0222	GO:0016887	ATPase activity
AF_0222	GO:0005524	ATP binding
AF_0224	GO:0006865	amino acid transport
AF_0224	GO:0005886	plasma membrane
AF_0224	GO:0016021	integral component of membrane
AF_0224	GO:0022857	transmembrane transporter activity
AF_0226	GO:0016491	oxidoreductase activity
AF_0227	GO:0004106	chorismate mutase activity
AF_0227	GO:0004664	prephenate dehydratase activity
AF_0227	GO:0046417	chorismate metabolic process
AF_0227	GO:0009094	L-phenylalanine biosynthetic process
AF_0227	GO:0005737	cytoplasm
AF_0228	GO:0003855	3-dehydroquinate dehydratase activity
AF_0228	GO:0009073	aromatic amino acid family biosynthetic process
AF_0228	GO:0009423	chorismate biosynthetic process
AF_0229	GO:0003856	3-dehydroquinate synthase activity
AF_0229	GO:0051287	NAD binding
AF_0229	GO:0016639	oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
AF_0229	GO:0009073	aromatic amino acid family biosynthetic process
AF_0230	GO:0016836	hydro-lyase activity
AF_0230	GO:0009073	aromatic amino acid family biosynthetic process
AF_0230	GO:0004332	fructose-bisphosphate aldolase activity
AF_0230	GO:0016744	transferase activity, transferring aldehyde or ketonic groups
AF_0231	GO:0005886	plasma membrane
AF_0231	GO:0006865	amino acid transport
AF_0234	GO:0016787	hydrolase activity
AF_0235	GO:0004222	metalloendopeptidase activity
AF_0235	GO:0008270	zinc ion binding
AF_0235	GO:0005886	plasma membrane
AF_0235	GO:0016021	integral component of membrane
AF_0237	GO:0016021	integral component of membrane
AF_0237	GO:0005886	plasma membrane
AF_0237	GO:0022857	transmembrane transporter activity
AF_0237	GO:0006865	amino acid transport
AF_0239	GO:0000310	xanthine phosphoribosyltransferase activity
AF_0239	GO:0005886	plasma membrane
AF_0239	GO:0000287	magnesium ion binding
AF_0239	GO:0032265	XMP salvage
AF_0239	GO:0032263	GMP salvage
AF_0240	GO:0000034	adenine deaminase activity
AF_0240	GO:0006146	adenine catabolic process
AF_0241	GO:0030488	tRNA methylation
AF_0241	GO:0000049	tRNA binding
AF_0241	GO:0089715	tRNA m6t6A37 methyltransferase activity
AF_0242	GO:0005978	glycogen biosynthetic process
AF_0242	GO:0005524	ATP binding
AF_0242	GO:0008878	glucose-1-phosphate adenylyltransferase activity
AF_0245	GO:0003700	DNA-binding transcription factor activity
AF_0245	GO:0046983	protein dimerization activity
AF_0245	GO:0046914	transition metal ion binding
AF_0245	GO:0003677	DNA binding
AF_0245	GO:0005737	cytoplasm
AF_0246	GO:0016021	integral component of membrane
AF_0246	GO:0055072	iron ion homeostasis
AF_0246	GO:0005886	plasma membrane
AF_0246	GO:0015093	ferrous iron transmembrane transporter activity
AF_0246	GO:0005525	GTP binding
AF_0246	GO:0046914	transition metal ion binding
AF_0248	GO:0010181	FMN binding
AF_0248	GO:0016491	oxidoreductase activity
AF_0248	GO:0046872	metal ion binding
AF_0248	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0252	GO:0003883	CTP synthase activity
AF_0252	GO:0044210	'de novo' CTP biosynthetic process
AF_0252	GO:0006541	glutamine metabolic process
AF_0252	GO:0005524	ATP binding
AF_0252	GO:0046872	metal ion binding
AF_0253	GO:0005524	ATP binding
AF_0253	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity
AF_0253	GO:0016462	pyrophosphatase activity
AF_0253	GO:0006541	glutamine metabolic process
AF_0254	GO:0045454	cell redox homeostasis
AF_0254	GO:0016692	NADH peroxidase activity
AF_0254	GO:0050660	flavin adenine dinucleotide binding
AF_0260	GO:0006425	glutaminyl-tRNA aminoacylation
AF_0260	GO:0004819	glutamine-tRNA ligase activity
AF_0260	GO:0005524	ATP binding
AF_0260	GO:0005737	cytoplasm
AF_0260	GO:0006424	glutamyl-tRNA aminoacylation
AF_0262	GO:0046872	metal ion binding
AF_0262	GO:0102391	decanoate-CoA ligase activity
AF_0262	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_0262	GO:0005524	ATP binding
AF_0263	GO:0016780	phosphotransferase activity, for other substituted phosphate groups
AF_0263	GO:0016779	nucleotidyltransferase activity
AF_0263	GO:0046872	metal ion binding
AF_0263	GO:0016021	integral component of membrane
AF_0263	GO:0008654	phospholipid biosynthetic process
AF_0265	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_0266	GO:0006865	amino acid transport
AF_0266	GO:0016021	integral component of membrane
AF_0266	GO:0005886	plasma membrane
AF_0270	GO:0051920	peroxiredoxin activity
AF_0270	GO:0004601	peroxidase activity
AF_0270	GO:0005737	cytoplasm
AF_0273	GO:0008115	sarcosine oxidase activity
AF_0273	GO:0005737	cytoplasm
AF_0273	GO:0046653	tetrahydrofolate metabolic process
AF_0274	GO:0055130	D-alanine catabolic process
AF_0274	GO:0008718	D-amino-acid dehydrogenase activity
AF_0276	GO:0009236	cobalamin biosynthetic process
AF_0276	GO:0008939	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AF_0280	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0280	GO:0046872	metal ion binding
AF_0280	GO:0008173	RNA methyltransferase activity
AF_0280	GO:0006396	RNA processing
AF_0283	GO:0006635	fatty acid beta-oxidation
AF_0283	GO:0005737	cytoplasm
AF_0283	GO:0003988	acetyl-CoA C-acyltransferase activity
AF_0285	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity
AF_0285	GO:0019605	butyrate metabolic process
AF_0285	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_0285	GO:0070403	NAD+ binding
AF_0286	GO:0000166	nucleotide binding
AF_0286	GO:0009055	electron transfer activity
AF_0287	GO:0005737	cytoplasm
AF_0287	GO:0050660	flavin adenine dinucleotide binding
AF_0287	GO:0019605	butyrate metabolic process
AF_0287	GO:0009055	electron transfer activity
AF_0288	GO:0004781	sulfate adenylyltransferase (ATP) activity
AF_0288	GO:0004020	adenylylsulfate kinase activity
AF_0288	GO:0010134	sulfate assimilation via adenylyl sulfate reduction
AF_0288	GO:0005524	ATP binding
AF_0288	GO:0000103	sulfate assimilation
AF_0288	GO:0019379	sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)
AF_0288	GO:0000096	sulfur amino acid metabolic process
AF_0288	GO:0070814	hydrogen sulfide biosynthetic process
AF_0290	GO:0016887	ATPase activity
AF_0290	GO:0005524	ATP binding
AF_0302	GO:0000271	polysaccharide biosynthetic process
AF_0302	GO:0071555	cell wall organization
AF_0302	GO:0006065	UDP-glucuronate biosynthetic process
AF_0302	GO:0003979	UDP-glucose 6-dehydrogenase activity
AF_0302	GO:0051287	NAD binding
AF_0302	GO:0005737	cytoplasm
AF_0321	GO:0006486	protein glycosylation
AF_0321	GO:0016757	transferase activity, transferring glycosyl groups
AF_0321	GO:0000166	nucleotide binding
AF_0321	GO:0046872	metal ion binding
AF_0322	GO:0016740	transferase activity
AF_0322	GO:0005886	plasma membrane
AF_0322	GO:0016021	integral component of membrane
AF_0324	GO:0008460	dTDP-glucose 4,6-dehydratase activity
AF_0324	GO:0009225	nucleotide-sugar metabolic process
AF_0325	GO:0017000	antibiotic biosynthetic process
AF_0325	GO:0008879	glucose-1-phosphate thymidylyltransferase activity
AF_0325	GO:0046872	metal ion binding
AF_0327	GO:0000287	magnesium ion binding
AF_0327	GO:0010125	mycothiol biosynthetic process
AF_0327	GO:0008375	acetylglucosaminyltransferase activity
AF_0327	GO:0102710	D-inositol-3-phosphate glycosyltransferase activity
AF_0328	GO:0047267	undecaprenyl-phosphate mannosyltransferase activity
AF_0328	GO:0004582	dolichyl-phosphate beta-D-mannosyltransferase activity
AF_0332	GO:0004222	metalloendopeptidase activity
AF_0332	GO:0046872	metal ion binding
AF_0332	GO:0005886	plasma membrane
AF_0332	GO:0016021	integral component of membrane
AF_0333	GO:0050393	vinylacetyl-CoA delta-isomerase activity
AF_0333	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0333	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
AF_0333	GO:0046872	metal ion binding
AF_0333	GO:0043721	4-hydroxybutanoyl-CoA dehydratase activity
AF_0338	GO:0000746	conjugation
AF_0338	GO:0005524	ATP binding
AF_0338	GO:0005737	cytoplasm
AF_0339	GO:0046872	metal ion binding
AF_0339	GO:0008912	lactaldehyde reductase activity
AF_0339	GO:0019317	fucose catabolic process
AF_0343	GO:0051287	NAD binding
AF_0343	GO:0010181	FMN binding
AF_0343	GO:0003955	NAD(P)H dehydrogenase (quinone) activity
AF_0343	GO:0050661	NADP binding
AF_0343	GO:0050660	flavin adenine dinucleotide binding
AF_0344	GO:0050605	superoxide reductase activity
AF_0344	GO:0005506	iron ion binding
AF_0346	GO:0016021	integral component of membrane
AF_0346	GO:0005886	plasma membrane
AF_0346	GO:0015677	copper ion import
AF_0346	GO:0043682	copper transmembrane transporter activity, phosphorylative mechanism
AF_0346	GO:0005507	copper ion binding
AF_0346	GO:0005524	ATP binding
AF_0355	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0355	GO:0046872	metal ion binding
AF_0355	GO:0005737	cytoplasm
AF_0356	GO:0004747	ribokinase activity
AF_0356	GO:0019303	D-ribose catabolic process
AF_0356	GO:0005524	ATP binding
AF_0356	GO:0005829	cytosol
AF_0356	GO:0046872	metal ion binding
AF_0358	GO:0006281	DNA repair
AF_0358	GO:0006310	DNA recombination
AF_0358	GO:0003678	DNA helicase activity
AF_0358	GO:0003677	DNA binding
AF_0358	GO:0005524	ATP binding
AF_0361	GO:0003978	UDP-glucose 4-epimerase activity
AF_0361	GO:0000271	polysaccharide biosynthetic process
AF_0361	GO:0006012	galactose metabolic process
AF_0364	GO:0005737	cytoplasm
AF_0364	GO:0005524	ATP binding
AF_0364	GO:0004176	ATP-dependent peptidase activity
AF_0364	GO:0030163	protein catabolic process
AF_0364	GO:0004252	serine-type endopeptidase activity
AF_0366	GO:0005524	ATP binding
AF_0366	GO:0046872	metal ion binding
AF_0366	GO:0003987	acetate-CoA ligase activity
AF_0366	GO:0016208	AMP binding
AF_0366	GO:0019427	acetyl-CoA biosynthetic process from acetate
AF_0367	GO:0016021	integral component of membrane
AF_0367	GO:0005886	plasma membrane
AF_0367	GO:0022857	transmembrane transporter activity
AF_0370	GO:0046523	S-methyl-5-thioribose-1-phosphate isomerase activity
AF_0370	GO:0019509	L-methionine salvage from methylthioadenosine
AF_0370	GO:0019284	L-methionine salvage from S-adenosylmethionine
AF_0371	GO:0006284	base-excision repair
AF_0371	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds
AF_0371	GO:0140078	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AF_0372	GO:0005737	cytoplasm
AF_0372	GO:0097163	sulfur carrier activity
AF_0372	GO:0016783	sulfurtransferase activity
AF_0372	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_0374	GO:0016791	phosphatase activity
AF_0374	GO:0046872	metal ion binding
AF_0374	GO:0004647	phosphoserine phosphatase activity
AF_0374	GO:0050308	sugar-phosphatase activity
AF_0376	GO:0015977	carbon fixation
AF_0376	GO:0046356	acetyl-CoA catabolic process
AF_0376	GO:0008168	methyltransferase activity
AF_0376	GO:0005506	iron ion binding
AF_0376	GO:0031419	cobalamin binding
AF_0376	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0377	GO:0015977	carbon fixation
AF_0377	GO:0031419	cobalamin binding
AF_0377	GO:0006730	one-carbon metabolic process
AF_0378	GO:0018414	nickel incorporation into metallo-sulfur cluster
AF_0378	GO:0016020	membrane
AF_0378	GO:0005524	ATP binding
AF_0378	GO:0003924	GTPase activity
AF_0379	GO:0015977	carbon fixation
AF_0379	GO:0018492	carbon-monoxide dehydrogenase (acceptor) activity
AF_0379	GO:0043884	CO-methylating acetyl-CoA synthase activity
AF_0379	GO:0006084	acetyl-CoA metabolic process
AF_0379	GO:0046872	metal ion binding
AF_0379	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0386	GO:0000287	magnesium ion binding
AF_0386	GO:0006222	UMP biosynthetic process
AF_0386	GO:0044205	'de novo' UMP biosynthetic process
AF_0386	GO:0009116	nucleoside metabolic process
AF_0386	GO:0019856	pyrimidine nucleobase biosynthetic process
AF_0386	GO:0004588	orotate phosphoribosyltransferase activity
AF_0388	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0388	GO:0102573	aminodeoxyfutalosine synthase activity
AF_0388	GO:0005506	iron ion binding
AF_0388	GO:0009234	menaquinone biosynthetic process
AF_0390	GO:0009234	menaquinone biosynthetic process
AF_0390	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0390	GO:0044689	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity
AF_0390	GO:0005506	iron ion binding
AF_0390	GO:0046992	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
AF_0393	GO:0030420	establishment of competence for transformation
AF_0393	GO:0005524	ATP binding
AF_0393	GO:0030435	sporulation resulting in formation of a cellular spore
AF_0394	GO:0005886	plasma membrane
AF_0394	GO:0009339	glycolate oxidase complex
AF_0394	GO:0008891	glycolate oxidase activity
AF_0394	GO:0071949	FAD binding
AF_0394	GO:0019154	glycolate dehydrogenase activity
AF_0395	GO:0016692	NADH peroxidase activity
AF_0395	GO:0045454	cell redox homeostasis
AF_0395	GO:0050660	flavin adenine dinucleotide binding
AF_0400	GO:0045454	cell redox homeostasis
AF_0400	GO:0050660	flavin adenine dinucleotide binding
AF_0400	GO:0016692	NADH peroxidase activity
AF_0401	GO:0009052	pentose-phosphate shunt, non-oxidative branch
AF_0401	GO:0005524	ATP binding
AF_0401	GO:0004747	ribokinase activity
AF_0401	GO:0046872	metal ion binding
AF_0401	GO:0005737	cytoplasm
AF_0401	GO:0004751	ribose-5-phosphate isomerase activity
AF_0401	GO:0019303	D-ribose catabolic process
AF_0403	GO:0000287	magnesium ion binding
AF_0403	GO:0046474	glycerophospholipid biosynthetic process
AF_0403	GO:0002094	polyprenyltransferase activity
AF_0406	GO:0016772	transferase activity, transferring phosphorus-containing groups
AF_0406	GO:0003950	NAD+ ADP-ribosyltransferase activity
AF_0406	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation
AF_0409	GO:0033362	lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
AF_0409	GO:0030170	pyridoxal phosphate binding
AF_0409	GO:0010285	L,L-diaminopimelate aminotransferase activity
AF_0410	GO:0000155	phosphorelay sensor kinase activity
AF_0410	GO:0006355	regulation of transcription, DNA-templated
AF_0410	GO:0030435	sporulation resulting in formation of a cellular spore
AF_0410	GO:0042802	identical protein binding
AF_0410	GO:0005524	ATP binding
AF_0411	GO:0008270	zinc ion binding
AF_0411	GO:0005737	cytoplasm
AF_0411	GO:0005524	ATP binding
AF_0411	GO:0004817	cysteine-tRNA ligase activity
AF_0411	GO:0006423	cysteinyl-tRNA aminoacylation
AF_0419	GO:0003824	catalytic activity
AF_0422	GO:0032259	methylation
AF_0422	GO:0009236	cobalamin biosynthetic process
AF_0422	GO:0051287	NAD binding
AF_0422	GO:0004851	uroporphyrin-III C-methyltransferase activity
AF_0422	GO:0019354	siroheme biosynthetic process
AF_0422	GO:0051266	sirohydrochlorin ferrochelatase activity
AF_0422	GO:0043115	precorrin-2 dehydrogenase activity
AF_0423	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0423	GO:0046872	metal ion binding
AF_0423	GO:0018551	hydrogensulfite reductase activity
AF_0423	GO:0020037	heme binding
AF_0424	GO:0009055	electron transfer activity
AF_0424	GO:0020037	heme binding
AF_0424	GO:0018551	hydrogensulfite reductase activity
AF_0424	GO:0046872	metal ion binding
AF_0424	GO:0006790	sulfur compound metabolic process
AF_0424	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0428	GO:0042254	ribosome biogenesis
AF_0428	GO:0000287	magnesium ion binding
AF_0428	GO:0005737	cytoplasm
AF_0428	GO:0003924	GTPase activity
AF_0428	GO:0005525	GTP binding
AF_0430	GO:0005886	plasma membrane
AF_0430	GO:0005524	ATP binding
AF_0430	GO:0016887	ATPase activity
AF_0430	GO:0055072	iron ion homeostasis
AF_0430	GO:0006826	iron ion transport
AF_0431	GO:0033214	siderophore-dependent iron import into cell
AF_0431	GO:0005887	integral component of plasma membrane
AF_0431	GO:0022857	transmembrane transporter activity
AF_0434	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity
AF_0434	GO:0019605	butyrate metabolic process
AF_0434	GO:0070403	NAD+ binding
AF_0434	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_0435	GO:0019605	butyrate metabolic process
AF_0435	GO:0016829	lyase activity
AF_0436	GO:0003995	acyl-CoA dehydrogenase activity
AF_0436	GO:0050660	flavin adenine dinucleotide binding
AF_0436	GO:0006635	fatty acid beta-oxidation
AF_0438	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity
AF_0438	GO:0006633	fatty acid biosynthetic process
AF_0438	GO:0033818	beta-ketoacyl-acyl-carrier-protein synthase III activity
AF_0438	GO:0005737	cytoplasm
AF_0440	GO:0008616	queuosine biosynthetic process
AF_0440	GO:0046872	metal ion binding
AF_0440	GO:0070497	6-carboxy-5,6,7,8-tetrahydropterin synthase activity
AF_0441	GO:0000287	magnesium ion binding
AF_0441	GO:1904047	S-adenosyl-L-methionine binding
AF_0441	GO:0008616	queuosine biosynthetic process
AF_0441	GO:0016840	carbon-nitrogen lyase activity
AF_0441	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0442	GO:0005524	ATP binding
AF_0442	GO:0008270	zinc ion binding
AF_0442	GO:0016879	ligase activity, forming carbon-nitrogen bonds
AF_0442	GO:0008616	queuosine biosynthetic process
AF_0444	GO:0046872	metal ion binding
AF_0444	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
AF_0444	GO:0016787	hydrolase activity
AF_0448	GO:0005524	ATP binding
AF_0448	GO:0000155	phosphorelay sensor kinase activity
AF_0448	GO:0006355	regulation of transcription, DNA-templated
AF_0448	GO:0030435	sporulation resulting in formation of a cellular spore
AF_0449	GO:0000160	phosphorelay signal transduction system
AF_0449	GO:0046872	metal ion binding
AF_0449	GO:0005737	cytoplasm
AF_0449	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility
AF_0449	GO:0006935	chemotaxis
AF_0450	GO:0005886	plasma membrane
AF_0450	GO:0016021	integral component of membrane
AF_0450	GO:0000155	phosphorelay sensor kinase activity
AF_0450	GO:0005524	ATP binding
AF_0450	GO:0006355	regulation of transcription, DNA-templated
AF_0452	GO:0008094	DNA-dependent ATPase activity
AF_0452	GO:0003684	damaged DNA binding
AF_0452	GO:0005524	ATP binding
AF_0452	GO:0046872	metal ion binding
AF_0452	GO:0000725	recombinational repair
AF_0455	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0455	GO:0046872	metal ion binding
AF_0455	GO:0016491	oxidoreductase activity
AF_0455	GO:0005737	cytoplasm
AF_0455	GO:0010181	FMN binding
AF_0458	GO:0005975	carbohydrate metabolic process
AF_0458	GO:0008966	phosphoglucosamine mutase activity
AF_0458	GO:0000287	magnesium ion binding
AF_0459	GO:0016021	integral component of membrane
AF_0459	GO:0005886	plasma membrane
AF_0464	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
AF_0464	GO:0071949	FAD binding
AF_0464	GO:0009234	menaquinone biosynthetic process
AF_0465	GO:0005694	chromosome
AF_0465	GO:0005737	cytoplasm
AF_0465	GO:0005524	ATP binding
AF_0465	GO:0003677	DNA binding
AF_0465	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
AF_0465	GO:0006265	DNA topological change
AF_0465	GO:0006261	DNA-dependent DNA replication
AF_0468	GO:0006099	tricarboxylic acid cycle
AF_0468	GO:0005618	cell wall
AF_0468	GO:0005829	cytosol
AF_0468	GO:0030976	thiamine pyrophosphate binding
AF_0468	GO:0047553	2-oxoglutarate synthase activity
AF_0468	GO:0000287	magnesium ion binding
AF_0469	GO:0006979	response to oxidative stress
AF_0469	GO:0005618	cell wall
AF_0469	GO:0006099	tricarboxylic acid cycle
AF_0469	GO:0005886	plasma membrane
AF_0469	GO:0047553	2-oxoglutarate synthase activity
AF_0473	GO:0006825	copper ion transport
AF_0473	GO:0046872	metal ion binding
AF_0473	GO:0005524	ATP binding
AF_0473	GO:0005886	plasma membrane
AF_0473	GO:0019829	ATPase-coupled cation transmembrane transporter activity
AF_0473	GO:0016021	integral component of membrane
AF_0474	GO:0043565	sequence-specific DNA binding
AF_0475	GO:0015105	arsenite transmembrane transporter activity
AF_0475	GO:0015297	antiporter activity
AF_0475	GO:0016021	integral component of membrane
AF_0475	GO:0005886	plasma membrane
AF_0475	GO:0015699	antimonite transport
AF_0475	GO:0015104	antimonite transmembrane transporter activity
AF_0475	GO:0015700	arsenite transport
AF_0475	GO:0046685	response to arsenic-containing substance
AF_0477	GO:0004222	metalloendopeptidase activity
AF_0477	GO:0005886	plasma membrane
AF_0477	GO:0005524	ATP binding
AF_0477	GO:0004176	ATP-dependent peptidase activity
AF_0477	GO:0008270	zinc ion binding
AF_0477	GO:0016021	integral component of membrane
AF_0477	GO:0030163	protein catabolic process
AF_0478	GO:0016787	hydrolase activity
AF_0481	GO:0005737	cytoplasm
AF_0481	GO:0019774	proteasome core complex, beta-subunit complex
AF_0481	GO:0004298	threonine-type endopeptidase activity
AF_0481	GO:0019941	modification-dependent protein catabolic process
AF_0481	GO:0010498	proteasomal protein catabolic process
AF_0482	GO:0006364	rRNA processing
AF_0482	GO:0003723	RNA binding
AF_0482	GO:0046872	metal ion binding
AF_0482	GO:0005737	cytoplasm
AF_0482	GO:0004519	endonuclease activity
AF_0484	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity
AF_0484	GO:0003935	GTP cyclohydrolase II activity
AF_0484	GO:0000287	magnesium ion binding
AF_0484	GO:0030145	manganese ion binding
AF_0484	GO:0008270	zinc ion binding
AF_0484	GO:0009231	riboflavin biosynthetic process
AF_0484	GO:0005525	GTP binding
AF_0487	GO:0042597	periplasmic space
AF_0487	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
AF_0487	GO:0017000	antibiotic biosynthetic process
AF_0487	GO:0009372	quorum sensing
AF_0492	GO:0005737	cytoplasm
AF_0492	GO:0000287	magnesium ion binding
AF_0492	GO:0004654	polyribonucleotide nucleotidyltransferase activity
AF_0492	GO:0003723	RNA binding
AF_0492	GO:0006402	mRNA catabolic process
AF_0492	GO:0006396	RNA processing
AF_0493	GO:0003723	RNA binding
AF_0493	GO:0006396	RNA processing
AF_0493	GO:0005737	cytoplasm
AF_0493	GO:0000287	magnesium ion binding
AF_0493	GO:0004654	polyribonucleotide nucleotidyltransferase activity
AF_0493	GO:0006402	mRNA catabolic process
AF_0494	GO:0000175	3'-5'-exoribonuclease activity
AF_0494	GO:0000049	tRNA binding
AF_0494	GO:0009022	tRNA nucleotidyltransferase activity
AF_0494	GO:0016075	rRNA catabolic process
AF_0494	GO:0006364	rRNA processing
AF_0494	GO:0008033	tRNA processing
AF_0497	GO:0003677	DNA binding
AF_0497	GO:0003887	DNA-directed DNA polymerase activity
AF_0497	GO:0045004	DNA replication proofreading
AF_0497	GO:0000166	nucleotide binding
AF_0497	GO:0008296	3'-5'-exodeoxyribonuclease activity
AF_0497	GO:0006261	DNA-dependent DNA replication
AF_0497	GO:0009432	SOS response
AF_0499	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0499	GO:0046872	metal ion binding
AF_0499	GO:0055114	oxidation-reduction process
AF_0499	GO:0042597	periplasmic space
AF_0499	GO:0005886	plasma membrane
AF_0506	GO:0005886	plasma membrane
AF_0506	GO:0016021	integral component of membrane
AF_0506	GO:0046872	metal ion binding
AF_0506	GO:0016491	oxidoreductase activity
AF_0506	GO:0019605	butyrate metabolic process
AF_0506	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0508	GO:0042823	pyridoxal phosphate biosynthetic process
AF_0508	GO:0036381	pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
AF_0509	GO:0004359	glutaminase activity
AF_0509	GO:0036381	pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
AF_0509	GO:0006543	glutamine catabolic process
AF_0509	GO:0042823	pyridoxal phosphate biosynthetic process
AF_0512	GO:0032259	methylation
AF_0512	GO:0043770	demethylmenaquinone methyltransferase activity
AF_0512	GO:0102094	S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
AF_0512	GO:0102955	S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
AF_0512	GO:0102027	S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
AF_0512	GO:0009234	menaquinone biosynthetic process
AF_0520	GO:0009088	threonine biosynthetic process
AF_0520	GO:0004413	homoserine kinase activity
AF_0520	GO:0005524	ATP binding
AF_0520	GO:0005737	cytoplasm
AF_0522	GO:0009014	succinyl-diaminopimelate desuccinylase activity
AF_0522	GO:0046872	metal ion binding
AF_0522	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0522	GO:0019877	diaminopimelate biosynthetic process
AF_0527	GO:0005737	cytoplasm
AF_0527	GO:0000287	magnesium ion binding
AF_0527	GO:0004654	polyribonucleotide nucleotidyltransferase activity
AF_0527	GO:0003723	RNA binding
AF_0527	GO:0006402	mRNA catabolic process
AF_0527	GO:0006396	RNA processing
AF_0528	GO:0046872	metal ion binding
AF_0528	GO:0051537	2 iron, 2 sulfur cluster binding
AF_0528	GO:0009055	electron transfer activity
AF_0528	GO:0050660	flavin adenine dinucleotide binding
AF_0528	GO:0044205	'de novo' UMP biosynthetic process
AF_0530	GO:0005737	cytoplasm
AF_0530	GO:0006261	DNA-dependent DNA replication
AF_0530	GO:0006265	DNA topological change
AF_0530	GO:0046872	metal ion binding
AF_0530	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
AF_0530	GO:0003677	DNA binding
AF_0530	GO:0005524	ATP binding
AF_0530	GO:0005694	chromosome
AF_0531	GO:0008641	ubiquitin-like modifier activating enzyme activity
AF_0531	GO:0009229	thiamine diphosphate biosynthetic process
AF_0531	GO:0009228	thiamine biosynthetic process
AF_0531	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_0531	GO:0061605	molybdopterin-synthase adenylyltransferase activity
AF_0531	GO:0046872	metal ion binding
AF_0531	GO:0005524	ATP binding
AF_0531	GO:0008033	tRNA processing
AF_0532	GO:0006364	rRNA processing
AF_0532	GO:0008270	zinc ion binding
AF_0532	GO:0003723	RNA binding
AF_0532	GO:0004521	endoribonuclease activity
AF_0532	GO:0005737	cytoplasm
AF_0532	GO:0004534	5'-3' exoribonuclease activity
AF_0535	GO:0032153	cell division site
AF_0535	GO:0051258	protein polymerization
AF_0535	GO:0043093	FtsZ-dependent cytokinesis
AF_0535	GO:0000917	division septum assembly
AF_0535	GO:0003924	GTPase activity
AF_0535	GO:0005737	cytoplasm
AF_0535	GO:0005525	GTP binding
AF_0538	GO:0022625	cytosolic large ribosomal subunit
AF_0538	GO:0015934	large ribosomal subunit
AF_0538	GO:0005840	ribosome
AF_0538	GO:0070180	large ribosomal subunit rRNA binding
AF_0538	GO:0019843	rRNA binding
AF_0538	GO:0003735	structural constituent of ribosome
AF_0538	GO:0000027	ribosomal large subunit assembly
AF_0538	GO:0006412	translation
AF_0544	GO:0055114	oxidation-reduction process
AF_0544	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0544	GO:0046872	metal ion binding
AF_0544	GO:0005737	cytoplasm
AF_0547	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0547	GO:0046872	metal ion binding
AF_0547	GO:0055114	oxidation-reduction process
AF_0547	GO:0005737	cytoplasm
AF_0548	GO:0004829	threonine-tRNA ligase activity
AF_0548	GO:0046872	metal ion binding
AF_0548	GO:0005524	ATP binding
AF_0548	GO:0000049	tRNA binding
AF_0548	GO:0006435	threonyl-tRNA aminoacylation
AF_0548	GO:0005737	cytoplasm
AF_0550	GO:0046872	metal ion binding
AF_0550	GO:0090614	5'-methylthioadenosine deaminase activity
AF_0550	GO:0050270	S-adenosylhomocysteine deaminase activity
AF_0551	GO:0005737	cytoplasm
AF_0551	GO:0030170	pyridoxal phosphate binding
AF_0551	GO:0004795	threonine synthase activity
AF_0551	GO:0009088	threonine biosynthetic process
AF_0553	GO:0061605	molybdopterin-synthase adenylyltransferase activity
AF_0553	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_0553	GO:0009228	thiamine biosynthetic process
AF_0553	GO:0046872	metal ion binding
AF_0553	GO:0005524	ATP binding
AF_0553	GO:0009229	thiamine diphosphate biosynthetic process
AF_0553	GO:0008033	tRNA processing
AF_0553	GO:0008641	ubiquitin-like modifier activating enzyme activity
AF_0557	GO:0016020	membrane
AF_0557	GO:0000166	nucleotide binding
AF_0557	GO:0016491	oxidoreductase activity
AF_0557	GO:0048038	quinone binding
AF_0559	GO:0000049	tRNA binding
AF_0559	GO:0016783	sulfurtransferase activity
AF_0559	GO:0005524	ATP binding
AF_0559	GO:0005737	cytoplasm
AF_0559	GO:0006400	tRNA modification
AF_0564	GO:0005737	cytoplasm
AF_0564	GO:0044571	[2Fe-2S] cluster assembly
AF_0564	GO:0006520	cellular amino acid metabolic process
AF_0564	GO:0030170	pyridoxal phosphate binding
AF_0564	GO:0051537	2 iron, 2 sulfur cluster binding
AF_0564	GO:0031071	cysteine desulfurase activity
AF_0564	GO:0046872	metal ion binding
AF_0565	GO:0016226	iron-sulfur cluster assembly
AF_0565	GO:0006879	cellular iron ion homeostasis
AF_0565	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0565	GO:0051537	2 iron, 2 sulfur cluster binding
AF_0565	GO:0005737	cytoplasm
AF_0565	GO:0008198	ferrous iron binding
AF_0568	GO:0005524	ATP binding
AF_0568	GO:0102391	decanoate-CoA ligase activity
AF_0568	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_0570	GO:0005525	GTP binding
AF_0570	GO:0003924	GTPase activity
AF_0570	GO:0000917	division septum assembly
AF_0570	GO:0051258	protein polymerization
AF_0570	GO:0032153	cell division site
AF_0570	GO:0043093	FtsZ-dependent cytokinesis
AF_0570	GO:0005737	cytoplasm
AF_0575	GO:0046872	metal ion binding
AF_0575	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
AF_0575	GO:0005829	cytosol
AF_0575	GO:0004416	hydroxyacylglutathione hydrolase activity
AF_0575	GO:0009636	response to toxic substance
AF_0580	GO:0003677	DNA binding
AF_0580	GO:0004519	endonuclease activity
AF_0580	GO:0008853	exodeoxyribonuclease III activity
AF_0580	GO:0006281	DNA repair
AF_0580	GO:0046872	metal ion binding
AF_0581	GO:0009103	lipopolysaccharide biosynthetic process
AF_0581	GO:0016021	integral component of membrane
AF_0581	GO:0005886	plasma membrane
AF_0581	GO:0046677	response to antibiotic
AF_0581	GO:0016780	phosphotransferase activity, for other substituted phosphate groups
AF_0581	GO:0099621	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase activity
AF_0581	GO:0036108	4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process
AF_0581	GO:0009245	lipid A biosynthetic process
AF_0584	GO:0043565	sequence-specific DNA binding
AF_0588	GO:0008616	queuosine biosynthetic process
AF_0588	GO:0101030	tRNA-guanine transglycosylation
AF_0588	GO:0046872	metal ion binding
AF_0588	GO:0008479	queuine tRNA-ribosyltransferase activity
AF_0589	GO:0005737	cytoplasm
AF_0589	GO:0000287	magnesium ion binding
AF_0589	GO:0016301	kinase activity
AF_0589	GO:0009156	ribonucleoside monophosphate biosynthetic process
AF_0589	GO:0009165	nucleotide biosynthetic process
AF_0589	GO:0005524	ATP binding
AF_0589	GO:0004749	ribose phosphate diphosphokinase activity
AF_0589	GO:0006015	5-phosphoribose 1-diphosphate biosynthetic process
AF_0589	GO:0009116	nucleoside metabolic process
AF_0590	GO:0003879	ATP phosphoribosyltransferase activity
AF_0590	GO:0000287	magnesium ion binding
AF_0590	GO:0000105	histidine biosynthetic process
AF_0590	GO:0005524	ATP binding
AF_0590	GO:0005737	cytoplasm
AF_0592	GO:0005525	GTP binding
AF_0592	GO:0005737	cytoplasm
AF_0592	GO:0003746	translation elongation factor activity
AF_0592	GO:0003924	GTPase activity
AF_0596	GO:0071555	cell wall organization
AF_0596	GO:0000271	polysaccharide biosynthetic process
AF_0596	GO:0005737	cytoplasm
AF_0596	GO:0006065	UDP-glucuronate biosynthetic process
AF_0596	GO:0003979	UDP-glucose 6-dehydrogenase activity
AF_0596	GO:0051287	NAD binding
AF_0606	GO:0000287	magnesium ion binding
AF_0606	GO:0010125	mycothiol biosynthetic process
AF_0606	GO:0102710	D-inositol-3-phosphate glycosyltransferase activity
AF_0606	GO:0008375	acetylglucosaminyltransferase activity
AF_0607	GO:0016757	transferase activity, transferring glycosyl groups
AF_0607	GO:0000271	polysaccharide biosynthetic process
AF_0607	GO:0009405	pathogenesis
AF_0617	GO:0010125	mycothiol biosynthetic process
AF_0617	GO:0000287	magnesium ion binding
AF_0617	GO:0102710	D-inositol-3-phosphate glycosyltransferase activity
AF_0617	GO:0008375	acetylglucosaminyltransferase activity
AF_0621	GO:0004523	RNA-DNA hybrid ribonuclease activity
AF_0621	GO:0005737	cytoplasm
AF_0621	GO:0003723	RNA binding
AF_0621	GO:0006401	RNA catabolic process
AF_0621	GO:0030145	manganese ion binding
AF_0622	GO:0048500	signal recognition particle
AF_0622	GO:0008312	7S RNA binding
AF_0622	GO:0005525	GTP binding
AF_0622	GO:0003924	GTPase activity
AF_0622	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
AF_0623	GO:0006310	DNA recombination
AF_0623	GO:0005524	ATP binding
AF_0623	GO:0003677	DNA binding
AF_0623	GO:0051103	DNA ligation involved in DNA repair
AF_0623	GO:0046872	metal ion binding
AF_0623	GO:0003910	DNA ligase (ATP) activity
AF_0623	GO:0051301	cell division
AF_0623	GO:0071897	DNA biosynthetic process
AF_0623	GO:0006260	DNA replication
AF_0623	GO:0007049	cell cycle
AF_0628	GO:0019878	lysine biosynthetic process via aminoadipic acid
AF_0628	GO:0046872	metal ion binding
AF_0628	GO:0047046	homoisocitrate dehydrogenase activity
AF_0629	GO:0003861	3-isopropylmalate dehydratase activity
AF_0629	GO:0009098	leucine biosynthetic process
AF_0632	GO:0051536	iron-sulfur cluster binding
AF_0632	GO:0005506	iron ion binding
AF_0632	GO:0016226	iron-sulfur cluster assembly
AF_0632	GO:0009399	nitrogen fixation
AF_0633	GO:0000049	tRNA binding
AF_0633	GO:0005737	cytoplasm
AF_0633	GO:0006428	isoleucyl-tRNA aminoacylation
AF_0633	GO:0008270	zinc ion binding
AF_0633	GO:0004822	isoleucine-tRNA ligase activity
AF_0633	GO:0002161	aminoacyl-tRNA editing activity
AF_0633	GO:0005524	ATP binding
AF_0634	GO:0006591	ornithine metabolic process
AF_0634	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0634	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase
AF_0634	GO:0047530	2,4-diaminopentanoate dehydrogenase activity
AF_0638	GO:0008509	anion transmembrane transporter activity
AF_0638	GO:0016887	ATPase activity
AF_0638	GO:0005886	plasma membrane
AF_0638	GO:0005524	ATP binding
AF_0639	GO:0015734	taurine transport
AF_0639	GO:0005887	integral component of plasma membrane
AF_0639	GO:0042918	alkanesulfonate transport
AF_0639	GO:0005886	plasma membrane
AF_0639	GO:0010438	cellular response to sulfur starvation
AF_0639	GO:0022857	transmembrane transporter activity
AF_0639	GO:0005368	taurine transmembrane transporter activity
AF_0639	GO:0042959	alkanesulfonate transmembrane transporter activity
AF_0640	GO:0005886	plasma membrane
AF_0640	GO:0016887	ATPase activity
AF_0640	GO:0015414	ATPase-coupled nitrate transmembrane transporter activity
AF_0640	GO:0042128	nitrate assimilation
AF_0640	GO:0005524	ATP binding
AF_0646	GO:0008783	agmatinase activity
AF_0646	GO:0046872	metal ion binding
AF_0646	GO:0033388	putrescine biosynthetic process from arginine
AF_0646	GO:0008295	spermidine biosynthetic process
AF_0647	GO:0006099	tricarboxylic acid cycle
AF_0647	GO:0006097	glyoxylate cycle
AF_0647	GO:0022900	electron transport chain
AF_0647	GO:0006979	response to oxidative stress
AF_0647	GO:0051287	NAD binding
AF_0647	GO:0004450	isocitrate dehydrogenase (NADP+) activity
AF_0647	GO:0005737	cytoplasm
AF_0647	GO:0000287	magnesium ion binding
AF_0647	GO:0005829	cytosol
AF_0654	GO:0050660	flavin adenine dinucleotide binding
AF_0654	GO:0016491	oxidoreductase activity
AF_0654	GO:0042597	periplasmic space
AF_0655	GO:0005829	cytosol
AF_0655	GO:0008237	metallopeptidase activity
AF_0659	GO:0000746	conjugation
AF_0659	GO:0005737	cytoplasm
AF_0659	GO:0005524	ATP binding
AF_0662	GO:0016020	membrane
AF_0662	GO:0000104	succinate dehydrogenase activity
AF_0662	GO:0010181	FMN binding
AF_0663	GO:0009405	pathogenesis
AF_0663	GO:0016117	carotenoid biosynthetic process
AF_0663	GO:0016491	oxidoreductase activity
AF_0665	GO:0004674	protein serine/threonine kinase activity
AF_0665	GO:0005524	ATP binding
AF_0670	GO:0009073	aromatic amino acid family biosynthetic process
AF_0670	GO:0009423	chorismate biosynthetic process
AF_0670	GO:0004107	chorismate synthase activity
AF_0671	GO:0003995	acyl-CoA dehydrogenase activity
AF_0671	GO:0050660	flavin adenine dinucleotide binding
AF_0672	GO:0046872	metal ion binding
AF_0672	GO:0005524	ATP binding
AF_0672	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_0672	GO:0102391	decanoate-CoA ligase activity
AF_0673	GO:0045893	positive regulation of transcription, DNA-templated
AF_0673	GO:0003700	DNA-binding transcription factor activity
AF_0673	GO:0005737	cytoplasm
AF_0673	GO:0005507	copper ion binding
AF_0673	GO:0003677	DNA binding
AF_0676	GO:0009123	nucleoside monophosphate metabolic process
AF_0676	GO:0009132	nucleoside diphosphate metabolic process
AF_0676	GO:0044209	AMP salvage
AF_0676	GO:0008270	zinc ion binding
AF_0676	GO:0005524	ATP binding
AF_0676	GO:0004017	adenylate kinase activity
AF_0676	GO:0005829	cytosol
AF_0676	GO:0005737	cytoplasm
AF_0676	GO:0006163	purine nucleotide metabolic process
AF_0676	GO:0004550	nucleoside diphosphate kinase activity
AF_0677	GO:0019427	acetyl-CoA biosynthetic process from acetate
AF_0677	GO:0046872	metal ion binding
AF_0677	GO:0005524	ATP binding
AF_0677	GO:0016208	AMP binding
AF_0677	GO:0003987	acetate-CoA ligase activity
AF_0680	GO:0015424	ATPase-coupled amino acid transmembrane transporter activity
AF_0680	GO:0016887	ATPase activity
AF_0680	GO:0005524	ATP binding
AF_0680	GO:0005886	plasma membrane
AF_0681	GO:0050660	flavin adenine dinucleotide binding
AF_0681	GO:0005886	plasma membrane
AF_0681	GO:0102040	fumarate reductase (menaquinone)
AF_0681	GO:0009061	anaerobic respiration
AF_0681	GO:0022900	electron transport chain
AF_0682	GO:0006099	tricarboxylic acid cycle
AF_0682	GO:0046872	metal ion binding
AF_0682	GO:0102040	fumarate reductase (menaquinone)
AF_0682	GO:0009055	electron transfer activity
AF_0682	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0682	GO:0051538	3 iron, 4 sulfur cluster binding
AF_0682	GO:0005886	plasma membrane
AF_0682	GO:0051537	2 iron, 2 sulfur cluster binding
AF_0685	GO:0004300	enoyl-CoA hydratase activity
AF_0685	GO:0006631	fatty acid metabolic process
AF_0687	GO:0005524	ATP binding
AF_0687	GO:0006635	fatty acid beta-oxidation
AF_0687	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_0687	GO:0102391	decanoate-CoA ligase activity
AF_0690	GO:0046872	metal ion binding
AF_0690	GO:0047609	acetylputrescine deacetylase activity
AF_0691	GO:0006814	sodium ion transport
AF_0691	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
AF_0691	GO:0009055	electron transfer activity
AF_0691	GO:0051537	2 iron, 2 sulfur cluster binding
AF_0691	GO:0005886	plasma membrane
AF_0691	GO:0016021	integral component of membrane
AF_0691	GO:0046872	metal ion binding
AF_0696	GO:0005886	plasma membrane
AF_0696	GO:0000917	division septum assembly
AF_0696	GO:0016887	ATPase activity
AF_0696	GO:0005524	ATP binding
AF_0696	GO:0005829	cytosol
AF_0696	GO:0051782	negative regulation of cell division
AF_0696	GO:0009898	cytoplasmic side of plasma membrane
AF_0699	GO:0005737	cytoplasm
AF_0699	GO:0005524	ATP binding
AF_0699	GO:0000049	tRNA binding
AF_0699	GO:0008270	zinc ion binding
AF_0699	GO:0006419	alanyl-tRNA aminoacylation
AF_0699	GO:0004813	alanine-tRNA ligase activity
AF_0700	GO:0004072	aspartate kinase activity
AF_0700	GO:0005524	ATP binding
AF_0700	GO:0050661	NADP binding
AF_0700	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0700	GO:0009088	threonine biosynthetic process
AF_0700	GO:0004412	homoserine dehydrogenase activity
AF_0702	GO:0009228	thiamine biosynthetic process
AF_0702	GO:0016763	transferase activity, transferring pentosyl groups
AF_0702	GO:0005506	iron ion binding
AF_0702	GO:0009229	thiamine diphosphate biosynthetic process
AF_0702	GO:0052837	thiazole biosynthetic process
AF_0704	GO:0008276	protein methyltransferase activity
AF_0704	GO:0005737	cytoplasm
AF_0707	GO:0004659	prenyltransferase activity
AF_0707	GO:0000287	magnesium ion binding
AF_0710	GO:0008986	pyruvate, water dikinase activity
AF_0710	GO:0005524	ATP binding
AF_0710	GO:0046872	metal ion binding
AF_0710	GO:0006090	pyruvate metabolic process
AF_0710	GO:0006094	gluconeogenesis
AF_0713	GO:0003949	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity
AF_0713	GO:0000105	histidine biosynthetic process
AF_0713	GO:0005737	cytoplasm
AF_0724	GO:0032259	methylation
AF_0724	GO:0009236	cobalamin biosynthetic process
AF_0724	GO:0008168	methyltransferase activity
AF_0726	GO:0046026	precorrin-4 C11-methyltransferase activity
AF_0726	GO:0032259	methylation
AF_0726	GO:0055114	oxidation-reduction process
AF_0726	GO:0009236	cobalamin biosynthetic process
AF_0728	GO:0009236	cobalamin biosynthetic process
AF_0728	GO:0015087	cobalt ion transmembrane transporter activity
AF_0728	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_0731	GO:0016887	ATPase activity
AF_0731	GO:0015087	cobalt ion transmembrane transporter activity
AF_0731	GO:0005524	ATP binding
AF_0731	GO:0005886	plasma membrane
AF_0731	GO:0009236	cobalamin biosynthetic process
AF_0733	GO:0009229	thiamine diphosphate biosynthetic process
AF_0733	GO:0009228	thiamine biosynthetic process
AF_0733	GO:0009030	thiamine-phosphate kinase activity
AF_0733	GO:0000287	magnesium ion binding
AF_0733	GO:0005524	ATP binding
AF_0737	GO:0008033	tRNA processing
AF_0737	GO:0000166	nucleotide binding
AF_0743	GO:0003677	DNA binding
AF_0743	GO:0003700	DNA-binding transcription factor activity
AF_0743	GO:0016151	nickel cation binding
AF_0743	GO:0006355	regulation of transcription, DNA-templated
AF_0743	GO:0010045	response to nickel cation
AF_0744	GO:0005525	GTP binding
AF_0744	GO:0005737	cytoplasm
AF_0744	GO:0003924	GTPase activity
AF_0744	GO:0003746	translation elongation factor activity
AF_0745	GO:0044205	'de novo' UMP biosynthetic process
AF_0745	GO:0005737	cytoplasm
AF_0745	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
AF_0745	GO:1990663	dihydroorotate dehydrogenase (fumarate) activity
AF_0745	GO:0004152	dihydroorotate dehydrogenase activity
AF_0747	GO:0005737	cytoplasm
AF_0747	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0747	GO:0008837	diaminopimelate epimerase activity
AF_0750	GO:0030976	thiamine pyrophosphate binding
AF_0750	GO:0047553	2-oxoglutarate synthase activity
AF_0750	GO:0005829	cytosol
AF_0750	GO:0000287	magnesium ion binding
AF_0750	GO:0005618	cell wall
AF_0750	GO:0006099	tricarboxylic acid cycle
AF_0755	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0755	GO:0016491	oxidoreductase activity
AF_0755	GO:0019605	butyrate metabolic process
AF_0755	GO:0016021	integral component of membrane
AF_0755	GO:0005886	plasma membrane
AF_0755	GO:0046872	metal ion binding
AF_0756	GO:0005737	cytoplasm
AF_0756	GO:0030145	manganese ion binding
AF_0756	GO:0004427	inorganic diphosphatase activity
AF_0767	GO:0006183	GTP biosynthetic process
AF_0767	GO:0006241	CTP biosynthetic process
AF_0767	GO:0006228	UTP biosynthetic process
AF_0767	GO:0046872	metal ion binding
AF_0767	GO:0005737	cytoplasm
AF_0767	GO:0005524	ATP binding
AF_0767	GO:0004550	nucleoside diphosphate kinase activity
AF_0770	GO:0006355	regulation of transcription, DNA-templated
AF_0770	GO:0000155	phosphorelay sensor kinase activity
AF_0770	GO:0005524	ATP binding
AF_0770	GO:0030435	sporulation resulting in formation of a cellular spore
AF_0776	GO:0005524	ATP binding
AF_0776	GO:0003723	RNA binding
AF_0776	GO:0006437	tyrosyl-tRNA aminoacylation
AF_0776	GO:0005737	cytoplasm
AF_0776	GO:0004831	tyrosine-tRNA ligase activity
AF_0781	GO:0005524	ATP binding
AF_0781	GO:0002949	tRNA threonylcarbamoyladenosine modification
AF_0781	GO:0006450	regulation of translational fidelity
AF_0781	GO:0000049	tRNA binding
AF_0781	GO:0016779	nucleotidyltransferase activity
AF_0781	GO:0061710	L-threonylcarbamoyladenylate synthase
AF_0781	GO:0003725	double-stranded RNA binding
AF_0781	GO:0005737	cytoplasm
AF_0784	GO:0005887	integral component of plasma membrane
AF_0784	GO:0033281	TAT protein transport complex
AF_0784	GO:0008320	protein transmembrane transporter activity
AF_0784	GO:0043953	protein transport by the Tat complex
AF_0786	GO:0005887	integral component of plasma membrane
AF_0786	GO:1903830	magnesium ion transmembrane transport
AF_0786	GO:0006824	cobalt ion transport
AF_0786	GO:0015095	magnesium ion transmembrane transporter activity
AF_0786	GO:0050897	cobalt ion binding
AF_0786	GO:0000287	magnesium ion binding
AF_0786	GO:0015087	cobalt ion transmembrane transporter activity
AF_0786	GO:0051260	protein homooligomerization
AF_0786	GO:0042802	identical protein binding
AF_0788	GO:0005886	plasma membrane
AF_0788	GO:0016021	integral component of membrane
AF_0797	GO:0044689	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity
AF_0797	GO:0016829	lyase activity
AF_0797	GO:0046872	metal ion binding
AF_0797	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0798	GO:0046872	metal ion binding
AF_0798	GO:0016829	lyase activity
AF_0798	GO:0044689	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity
AF_0798	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0800	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0800	GO:0030170	pyridoxal phosphate binding
AF_0800	GO:0008836	diaminopimelate decarboxylase activity
AF_0806	GO:0005887	integral component of plasma membrane
AF_0806	GO:0015129	lactate transmembrane transporter activity
AF_0806	GO:0015295	solute:proton symporter activity
AF_0806	GO:0005886	plasma membrane
AF_0807	GO:0010181	FMN binding
AF_0807	GO:0033720	(S)-mandelate dehydrogenase activity
AF_0807	GO:0019596	mandelate catabolic process
AF_0807	GO:0016020	membrane
AF_0808	GO:0019154	glycolate dehydrogenase activity
AF_0808	GO:0008891	glycolate oxidase activity
AF_0808	GO:0071949	FAD binding
AF_0808	GO:0005886	plasma membrane
AF_0808	GO:0009339	glycolate oxidase complex
AF_0811	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0811	GO:0046872	metal ion binding
AF_0811	GO:0019516	lactate oxidation
AF_0813	GO:0051287	NAD binding
AF_0813	GO:0004617	phosphoglycerate dehydrogenase activity
AF_0813	GO:0006520	cellular amino acid metabolic process
AF_0813	GO:0006564	L-serine biosynthetic process
AF_0814	GO:0016311	dephosphorylation
AF_0814	GO:0017111	nucleoside-triphosphatase activity
AF_0814	GO:0005524	ATP binding
AF_0815	GO:0000049	tRNA binding
AF_0815	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity
AF_0815	GO:0002940	tRNA N2-guanine methylation
AF_0818	GO:0003998	acylphosphatase activity
AF_0819	GO:0005737	cytoplasm
AF_0819	GO:0016833	oxo-acid-lyase activity
AF_0819	GO:0000105	histidine biosynthetic process
AF_0819	GO:0000107	imidazoleglycerol-phosphate synthase activity
AF_0822	GO:0016887	ATPase activity
AF_0822	GO:0005524	ATP binding
AF_0822	GO:0015658	branched-chain amino acid transmembrane transporter activity
AF_0823	GO:0005524	ATP binding
AF_0823	GO:0016887	ATPase activity
AF_0823	GO:0006865	amino acid transport
AF_0825	GO:0016021	integral component of membrane
AF_0825	GO:0005886	plasma membrane
AF_0825	GO:0022857	transmembrane transporter activity
AF_0825	GO:0006865	amino acid transport
AF_0827	GO:0015803	branched-chain amino acid transport
AF_0827	GO:1903805	L-valine import across plasma membrane
AF_0827	GO:1903806	L-isoleucine import across plasma membrane
AF_0827	GO:0015808	L-alanine transport
AF_0827	GO:0042941	D-alanine transport
AF_0827	GO:0042597	periplasmic space
AF_0830	GO:0010181	FMN binding
AF_0830	GO:0016491	oxidoreductase activity
AF_0830	GO:0005506	iron ion binding
AF_0831	GO:0005506	iron ion binding
AF_0831	GO:0016692	NADH peroxidase activity
AF_0831	GO:0009055	electron transfer activity
AF_0832	GO:0005737	cytoplasm
AF_0832	GO:0005506	iron ion binding
AF_0832	GO:0016491	oxidoreductase activity
AF_0833	GO:0005506	iron ion binding
AF_0833	GO:0019430	removal of superoxide radicals
AF_0833	GO:0050605	superoxide reductase activity
AF_0834	GO:0006879	cellular iron ion homeostasis
AF_0834	GO:0008199	ferric iron binding
AF_0834	GO:0016491	oxidoreductase activity
AF_0834	GO:0006826	iron ion transport
AF_0838	GO:0015079	potassium ion transmembrane transporter activity
AF_0838	GO:0005886	plasma membrane
AF_0839	GO:0016021	integral component of membrane
AF_0839	GO:0005886	plasma membrane
AF_0839	GO:0005267	potassium channel activity
AF_0839	GO:0071805	potassium ion transmembrane transport
AF_0839	GO:0015379	potassium:chloride symporter activity
AF_0839	GO:0030955	potassium ion binding
AF_0840	GO:0005524	ATP binding
AF_0840	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_0840	GO:0102391	decanoate-CoA ligase activity
AF_0841	GO:0000287	magnesium ion binding
AF_0841	GO:0044208	'de novo' AMP biosynthetic process
AF_0841	GO:0005737	cytoplasm
AF_0841	GO:0004019	adenylosuccinate synthase activity
AF_0841	GO:0005525	GTP binding
AF_0845	GO:0050660	flavin adenine dinucleotide binding
AF_0845	GO:0003995	acyl-CoA dehydrogenase activity
AF_0845	GO:0006635	fatty acid beta-oxidation
AF_0846	GO:0006814	sodium ion transport
AF_0846	GO:0005886	plasma membrane
AF_0846	GO:0016021	integral component of membrane
AF_0846	GO:0015299	solute:proton antiporter activity
AF_0847	GO:0005524	ATP binding
AF_0847	GO:0016887	ATPase activity
AF_0847	GO:0006865	amino acid transport
AF_0847	GO:0031460	glycine betaine transport
AF_0847	GO:0016020	membrane
AF_0851	GO:0000166	nucleotide binding
AF_0851	GO:0046872	metal ion binding
AF_0851	GO:0052856	NADHX epimerase activity
AF_0851	GO:0052857	NADPHX epimerase activity
AF_0852	GO:0070905	serine binding
AF_0852	GO:0005829	cytosol
AF_0852	GO:0006565	L-serine catabolic process
AF_0852	GO:0016597	amino acid binding
AF_0852	GO:0050897	cobalt ion binding
AF_0852	GO:0004372	glycine hydroxymethyltransferase activity
AF_0852	GO:0006730	one-carbon metabolic process
AF_0852	GO:0046653	tetrahydrofolate metabolic process
AF_0852	GO:0030170	pyridoxal phosphate binding
AF_0852	GO:0006544	glycine metabolic process
AF_0852	GO:0019264	glycine biosynthetic process from serine
AF_0852	GO:0046655	folic acid metabolic process
AF_0852	GO:1904482	cellular response to tetrahydrofolate
AF_0852	GO:0008270	zinc ion binding
AF_0852	GO:0035999	tetrahydrofolate interconversion
AF_0853	GO:0003723	RNA binding
AF_0853	GO:0016434	rRNA (cytosine) methyltransferase activity
AF_0853	GO:0005737	cytoplasm
AF_0855	GO:0006096	glycolytic process
AF_0855	GO:0004459	L-lactate dehydrogenase activity
AF_0855	GO:0005737	cytoplasm
AF_0861	GO:0006730	one-carbon metabolic process
AF_0861	GO:0019647	formaldehyde assimilation via ribulose monophosphate cycle
AF_0861	GO:0005975	carbohydrate metabolic process
AF_0861	GO:0043801	hexulose-6-phosphate synthase activity
AF_0861	GO:0004590	orotidine-5'-phosphate decarboxylase activity
AF_0861	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
AF_0862	GO:0046872	metal ion binding
AF_0862	GO:0005525	GTP binding
AF_0862	GO:0008452	RNA ligase activity
AF_0862	GO:0008033	tRNA processing
AF_0865	GO:0009102	biotin biosynthetic process
AF_0865	GO:0005737	cytoplasm
AF_0865	GO:0052689	carboxylic ester hydrolase activity
AF_0866	GO:0019563	glycerol catabolic process
AF_0866	GO:0004370	glycerol kinase activity
AF_0866	GO:0006071	glycerol metabolic process
AF_0866	GO:0005524	ATP binding
AF_0866	GO:0006072	glycerol-3-phosphate metabolic process
AF_0866	GO:0005829	cytosol
AF_0868	GO:0009339	glycolate oxidase complex
AF_0868	GO:0008891	glycolate oxidase activity
AF_0868	GO:0019154	glycolate dehydrogenase activity
AF_0868	GO:0071949	FAD binding
AF_0868	GO:0005886	plasma membrane
AF_0871	GO:0046167	glycerol-3-phosphate biosynthetic process
AF_0871	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity
AF_0871	GO:0009331	glycerol-3-phosphate dehydrogenase complex
AF_0871	GO:0005975	carbohydrate metabolic process
AF_0871	GO:0046168	glycerol-3-phosphate catabolic process
AF_0871	GO:0006650	glycerophospholipid metabolic process
AF_0871	GO:0051287	NAD binding
AF_0871	GO:0008654	phospholipid biosynthetic process
AF_0873	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0873	GO:0009116	nucleoside metabolic process
AF_0873	GO:0009113	purine nucleobase biosynthetic process
AF_0873	GO:0006189	'de novo' IMP biosynthetic process
AF_0873	GO:0000287	magnesium ion binding
AF_0873	GO:0006541	glutamine metabolic process
AF_0873	GO:0004044	amidophosphoribosyltransferase activity
AF_0873	GO:0006164	purine nucleotide biosynthetic process
AF_0876	GO:0005576	extracellular region
AF_0876	GO:0005618	cell wall
AF_0876	GO:0009166	nucleotide catabolic process
AF_0876	GO:0008768	UDP-sugar diphosphatase activity
AF_0876	GO:0000166	nucleotide binding
AF_0876	GO:0046872	metal ion binding
AF_0876	GO:0004519	endonuclease activity
AF_0876	GO:0008253	5'-nucleotidase activity
AF_0876	GO:0030288	outer membrane-bounded periplasmic space
AF_0879	GO:0009229	thiamine diphosphate biosynthetic process
AF_0879	GO:0009228	thiamine biosynthetic process
AF_0879	GO:0000049	tRNA binding
AF_0879	GO:0005737	cytoplasm
AF_0879	GO:0005524	ATP binding
AF_0879	GO:0004810	tRNA adenylyltransferase activity
AF_0879	GO:0016783	sulfurtransferase activity
AF_0879	GO:0034227	tRNA thio-modification
AF_0880	GO:0005506	iron ion binding
AF_0880	GO:0072592	oxygen metabolic process
AF_0880	GO:0009636	response to toxic substance
AF_0880	GO:0009055	electron transfer activity
AF_0882	GO:0006520	cellular amino acid metabolic process
AF_0882	GO:0004067	asparaginase activity
AF_0882	GO:0005737	cytoplasm
AF_0885	GO:0043721	4-hydroxybutanoyl-CoA dehydratase activity
AF_0885	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0885	GO:0046872	metal ion binding
AF_0885	GO:0050393	vinylacetyl-CoA delta-isomerase activity
AF_0885	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
AF_0886	GO:0005737	cytoplasm
AF_0886	GO:0004013	adenosylhomocysteinase activity
AF_0886	GO:0006730	one-carbon metabolic process
AF_0890	GO:0005886	plasma membrane
AF_0893	GO:0005829	cytosol
AF_0893	GO:0005887	integral component of plasma membrane
AF_0893	GO:0030288	outer membrane-bounded periplasmic space
AF_0893	GO:0005886	plasma membrane
AF_0893	GO:0009927	histidine phosphotransfer kinase activity
AF_0893	GO:0005524	ATP binding
AF_0893	GO:0000155	phosphorelay sensor kinase activity
AF_0893	GO:0004673	protein histidine kinase activity
AF_0893	GO:0018106	peptidyl-histidine phosphorylation
AF_0893	GO:0046777	protein autophosphorylation
AF_0893	GO:0006355	regulation of transcription, DNA-templated
AF_0894	GO:0004814	arginine-tRNA ligase activity
AF_0894	GO:0005737	cytoplasm
AF_0894	GO:0006420	arginyl-tRNA aminoacylation
AF_0894	GO:0005524	ATP binding
AF_0901	GO:0017111	nucleoside-triphosphatase activity
AF_0901	GO:0009117	nucleotide metabolic process
AF_0901	GO:0000166	nucleotide binding
AF_0901	GO:0046872	metal ion binding
AF_0904	GO:0050897	cobalt ion binding
AF_0904	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0904	GO:0019877	diaminopimelate biosynthetic process
AF_0904	GO:0008270	zinc ion binding
AF_0904	GO:0009014	succinyl-diaminopimelate desuccinylase activity
AF_0907	GO:0022857	transmembrane transporter activity
AF_0907	GO:0005886	plasma membrane
AF_0907	GO:0016021	integral component of membrane
AF_0909	GO:0019877	diaminopimelate biosynthetic process
AF_0909	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0909	GO:0005737	cytoplasm
AF_0909	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase
AF_0909	GO:0051287	NAD binding
AF_0909	GO:0050661	NADP binding
AF_0909	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
AF_0910	GO:0019877	diaminopimelate biosynthetic process
AF_0910	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_0910	GO:0005737	cytoplasm
AF_0910	GO:0008840	4-hydroxy-tetrahydrodipicolinate synthase activity
AF_0914	GO:0003729	mRNA binding
AF_0914	GO:0002188	translation reinitiation
AF_0914	GO:0003743	translation initiation factor activity
AF_0914	GO:0001731	formation of translation preinitiation complex
AF_0916	GO:0005737	cytoplasm
AF_0916	GO:0005524	ATP binding
AF_0916	GO:0004820	glycine-tRNA ligase activity
AF_0916	GO:0046983	protein dimerization activity
AF_0916	GO:0006426	glycyl-tRNA aminoacylation
AF_0920	GO:0005737	cytoplasm
AF_0920	GO:0004815	aspartate-tRNA ligase activity
AF_0920	GO:0050560	aspartate-tRNA(Asn) ligase activity
AF_0920	GO:0005524	ATP binding
AF_0920	GO:0003676	nucleic acid binding
AF_0920	GO:0006422	aspartyl-tRNA aminoacylation
AF_0926	GO:0016790	thiolester hydrolase activity
AF_0926	GO:0009239	enterobactin biosynthetic process
AF_0926	GO:0005737	cytoplasm
AF_0928	GO:0004427	inorganic diphosphatase activity
AF_0928	GO:0000287	magnesium ion binding
AF_0929	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
AF_0929	GO:0004590	orotidine-5'-phosphate decarboxylase activity
AF_0929	GO:0044205	'de novo' UMP biosynthetic process
AF_0930	GO:0061599	molybdopterin molybdotransferase activity
AF_0930	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_0930	GO:0032324	molybdopterin cofactor biosynthetic process
AF_0930	GO:0046872	metal ion binding
AF_0931	GO:0032324	molybdopterin cofactor biosynthetic process
AF_0931	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_0931	GO:0061599	molybdopterin molybdotransferase activity
AF_0931	GO:0046872	metal ion binding
AF_0932	GO:0046872	metal ion binding
AF_0932	GO:0005524	ATP binding
AF_0932	GO:0008080	N-acetyltransferase activity
AF_0933	GO:0009098	leucine biosynthetic process
AF_0933	GO:0009099	valine biosynthetic process
AF_0933	GO:0009097	isoleucine biosynthetic process
AF_0933	GO:0052655	L-valine transaminase activity
AF_0933	GO:0052656	L-isoleucine transaminase activity
AF_0933	GO:0052654	L-leucine transaminase activity
AF_0935	GO:0009088	threonine biosynthetic process
AF_0935	GO:0009086	methionine biosynthetic process
AF_0935	GO:0009097	isoleucine biosynthetic process
AF_0935	GO:0050661	NADP binding
AF_0935	GO:0004412	homoserine dehydrogenase activity
AF_0937	GO:0003746	translation elongation factor activity
AF_0937	GO:0003924	GTPase activity
AF_0937	GO:0005525	GTP binding
AF_0937	GO:0005737	cytoplasm
AF_0938	GO:0003735	structural constituent of ribosome
AF_0938	GO:0000049	tRNA binding
AF_0938	GO:0006412	translation
AF_0938	GO:0005840	ribosome
AF_0939	GO:0008270	zinc ion binding
AF_0939	GO:0042781	3'-tRNA processing endoribonuclease activity
AF_0942	GO:0008253	5'-nucleotidase activity
AF_0942	GO:0046872	metal ion binding
AF_0942	GO:0005737	cytoplasm
AF_0942	GO:0000166	nucleotide binding
AF_0943	GO:0009052	pentose-phosphate shunt, non-oxidative branch
AF_0943	GO:0004751	ribose-5-phosphate isomerase activity
AF_0949	GO:0004356	glutamate-ammonia ligase activity
AF_0949	GO:0005524	ATP binding
AF_0949	GO:0016020	membrane
AF_0949	GO:0005737	cytoplasm
AF_0949	GO:0019740	nitrogen utilization
AF_0949	GO:0046872	metal ion binding
AF_0949	GO:0006542	glutamine biosynthetic process
AF_0950	GO:0055114	oxidation-reduction process
AF_0950	GO:0046872	metal ion binding
AF_0950	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0950	GO:0005886	plasma membrane
AF_0951	GO:0042128	nitrate assimilation
AF_0951	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0951	GO:0050660	flavin adenine dinucleotide binding
AF_0951	GO:0020037	heme binding
AF_0951	GO:0046872	metal ion binding
AF_0951	GO:0050661	NADP binding
AF_0951	GO:0008942	nitrite reductase [NAD(P)H] activity
AF_0952	GO:0006541	glutamine metabolic process
AF_0953	GO:0046872	metal ion binding
AF_0953	GO:0051539	4 iron, 4 sulfur cluster binding
AF_0953	GO:0004355	glutamate synthase (NADPH) activity
AF_0953	GO:0006537	glutamate biosynthetic process
AF_0957	GO:0003852	2-isopropylmalate synthase activity
AF_0957	GO:0005829	cytosol
AF_0957	GO:0009098	leucine biosynthetic process
AF_0958	GO:0005886	plasma membrane
AF_0958	GO:0005524	ATP binding
AF_0958	GO:0016887	ATPase activity
AF_0958	GO:0015410	manganese transmembrane transporter activity, phosphorylative mechanism
AF_0959	GO:0005737	cytoplasm
AF_0959	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_0959	GO:0016887	ATPase activity
AF_0959	GO:0015437	lipopolysaccharide floppase activity
AF_0959	GO:0055085	transmembrane transport
AF_0959	GO:0005524	ATP binding
AF_0959	GO:0005886	plasma membrane
AF_0960	GO:0015658	branched-chain amino acid transmembrane transporter activity
AF_0960	GO:0016021	integral component of membrane
AF_0960	GO:0005886	plasma membrane
AF_0960	GO:0015803	branched-chain amino acid transport
AF_0963	GO:0016829	lyase activity
AF_0963	GO:0019605	butyrate metabolic process
AF_0964	GO:0050660	flavin adenine dinucleotide binding
AF_0964	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
AF_0969	GO:0006814	sodium ion transport
AF_0969	GO:0015293	symporter activity
AF_0969	GO:0043879	glycolate transmembrane transporter activity
AF_0969	GO:0015123	acetate transmembrane transporter activity
AF_0969	GO:0005887	integral component of plasma membrane
AF_0972	GO:0005829	cytosol
AF_0972	GO:0044776	DNA polymerase III, core complex
AF_0972	GO:0008408	3'-5' exonuclease activity
AF_0972	GO:0003677	DNA binding
AF_0972	GO:0045004	DNA replication proofreading
AF_0972	GO:0003887	DNA-directed DNA polymerase activity
AF_0972	GO:0046872	metal ion binding
AF_0973	GO:0008410	CoA-transferase activity
AF_0973	GO:0043427	carbon fixation by 3-hydroxypropionate cycle
AF_0974	GO:0008410	CoA-transferase activity
AF_0975	GO:0016208	AMP binding
AF_0975	GO:0005524	ATP binding
AF_0975	GO:0046872	metal ion binding
AF_0975	GO:0019427	acetyl-CoA biosynthetic process from acetate
AF_0975	GO:0003987	acetate-CoA ligase activity
AF_0976	GO:0046872	metal ion binding
AF_0976	GO:0005524	ATP binding
AF_0976	GO:0003987	acetate-CoA ligase activity
AF_0977	GO:0005887	integral component of plasma membrane
AF_0977	GO:0008519	ammonium transmembrane transporter activity
AF_0977	GO:0019740	nitrogen utilization
AF_0978	GO:0030234	enzyme regulator activity
AF_0978	GO:0006808	regulation of nitrogen utilization
AF_0978	GO:0000166	nucleotide binding
AF_0979	GO:0055085	transmembrane transport
AF_0979	GO:0005886	plasma membrane
AF_0979	GO:0016021	integral component of membrane
AF_0980	GO:0055085	transmembrane transport
AF_0980	GO:0006865	amino acid transport
AF_0980	GO:0005886	plasma membrane
AF_0980	GO:0016021	integral component of membrane
AF_0981	GO:0005524	ATP binding
AF_0981	GO:0016887	ATPase activity
AF_0981	GO:0016020	membrane
AF_0981	GO:0031460	glycine betaine transport
AF_0981	GO:0006865	amino acid transport
AF_0982	GO:0042597	periplasmic space
AF_0982	GO:0022857	transmembrane transporter activity
AF_0982	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_0984	GO:0005524	ATP binding
AF_0984	GO:0016887	ATPase activity
AF_0984	GO:0006814	sodium ion transport
AF_0985	GO:0000105	histidine biosynthetic process
AF_0985	GO:0004401	histidinol-phosphatase activity
AF_0985	GO:0004424	imidazoleglycerol-phosphate dehydratase activity
AF_0985	GO:0005737	cytoplasm
AF_0985	GO:0046872	metal ion binding
AF_0986	GO:0005737	cytoplasm
AF_0986	GO:0000105	histidine biosynthetic process
AF_0986	GO:0003949	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity
AF_0990	GO:0008410	CoA-transferase activity
AF_0991	GO:0050660	flavin adenine dinucleotide binding
AF_0991	GO:0003995	acyl-CoA dehydrogenase activity
AF_0991	GO:0019439	aromatic compound catabolic process
AF_0996	GO:0000746	conjugation
AF_0996	GO:0005524	ATP binding
AF_0996	GO:0005737	cytoplasm
AF_0997	GO:0090614	5'-methylthioadenosine deaminase activity
AF_0997	GO:0050270	S-adenosylhomocysteine deaminase activity
AF_0997	GO:0046872	metal ion binding
AF_1000	GO:0005737	cytoplasm
AF_1000	GO:0009435	NAD biosynthetic process
AF_1000	GO:0008795	NAD+ synthase activity
AF_1000	GO:0004359	glutaminase activity
AF_1000	GO:0005524	ATP binding
AF_1000	GO:0003952	NAD+ synthase (glutamine-hydrolyzing) activity
AF_1000	GO:0046872	metal ion binding
AF_1005	GO:0055085	transmembrane transport
AF_1005	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_1006	GO:0015562	efflux transmembrane transporter activity
AF_1006	GO:0016887	ATPase activity
AF_1006	GO:0005524	ATP binding
AF_1006	GO:0005886	plasma membrane
AF_1006	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane
AF_1014	GO:0005829	cytosol
AF_1014	GO:0004160	dihydroxy-acid dehydratase activity
AF_1014	GO:0016836	hydro-lyase activity
AF_1014	GO:0046872	metal ion binding
AF_1014	GO:0009097	isoleucine biosynthetic process
AF_1014	GO:0009099	valine biosynthetic process
AF_1014	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1017	GO:2001070	starch binding
AF_1017	GO:0042802	identical protein binding
AF_1017	GO:0022857	transmembrane transporter activity
AF_1017	GO:0005886	plasma membrane
AF_1017	GO:0016021	integral component of membrane
AF_1018	GO:0005886	plasma membrane
AF_1018	GO:0005524	ATP binding
AF_1018	GO:0016887	ATPase activity
AF_1018	GO:0022857	transmembrane transporter activity
AF_1018	GO:0055085	transmembrane transport
AF_1021	GO:0005886	plasma membrane
AF_1021	GO:0016887	ATPase activity
AF_1021	GO:0009877	nodulation
AF_1021	GO:0005524	ATP binding
AF_1021	GO:0022857	transmembrane transporter activity
AF_1022	GO:0015689	molybdate ion transport
AF_1022	GO:0030151	molybdenum ion binding
AF_1022	GO:0042802	identical protein binding
AF_1022	GO:0003700	DNA-binding transcription factor activity
AF_1023	GO:0102067	geranylgeranyl diphosphate reductase activity
AF_1023	GO:0045550	geranylgeranyl reductase activity
AF_1023	GO:0036070	light-independent bacteriochlorophyll biosynthetic process
AF_1023	GO:0015979	photosynthesis
AF_1024	GO:0008270	zinc ion binding
AF_1024	GO:0006265	DNA topological change
AF_1024	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
AF_1024	GO:0003678	DNA helicase activity
AF_1024	GO:0005524	ATP binding
AF_1024	GO:0003677	DNA binding
AF_1024	GO:0006268	DNA unwinding involved in DNA replication
AF_1025	GO:0019605	butyrate metabolic process
AF_1025	GO:0070403	NAD+ binding
AF_1025	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity
AF_1025	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_1026	GO:0003995	acyl-CoA dehydrogenase activity
AF_1026	GO:0004085	butyryl-CoA dehydrogenase activity
AF_1026	GO:0019605	butyrate metabolic process
AF_1026	GO:0050660	flavin adenine dinucleotide binding
AF_1027	GO:0043721	4-hydroxybutanoyl-CoA dehydratase activity
AF_1027	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1027	GO:0050393	vinylacetyl-CoA delta-isomerase activity
AF_1027	GO:0046872	metal ion binding
AF_1027	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
AF_1028	GO:0005737	cytoplasm
AF_1028	GO:0003988	acetyl-CoA C-acyltransferase activity
AF_1028	GO:0006635	fatty acid beta-oxidation
AF_1029	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_1029	GO:0102391	decanoate-CoA ligase activity
AF_1029	GO:0005524	ATP binding
AF_1034	GO:0005886	plasma membrane
AF_1034	GO:0016021	integral component of membrane
AF_1034	GO:0004888	transmembrane signaling receptor activity
AF_1034	GO:0006935	chemotaxis
AF_1034	GO:0007165	signal transduction
AF_1037	GO:0006935	chemotaxis
AF_1037	GO:0008983	protein-glutamate O-methyltransferase activity
AF_1038	GO:0006935	chemotaxis
AF_1038	GO:0050568	protein-glutamine glutaminase activity
AF_1039	GO:0016787	hydrolase activity
AF_1039	GO:0006935	chemotaxis
AF_1040	GO:0005524	ATP binding
AF_1040	GO:0006935	chemotaxis
AF_1040	GO:0000155	phosphorelay sensor kinase activity
AF_1040	GO:0019904	protein domain specific binding
AF_1040	GO:0005737	cytoplasm
AF_1041	GO:0008984	protein-glutamate methylesterase activity
AF_1041	GO:0006935	chemotaxis
AF_1041	GO:0018277	protein deamination
AF_1041	GO:0005737	cytoplasm
AF_1041	GO:0006482	protein demethylation
AF_1041	GO:0050568	protein-glutamine glutaminase activity
AF_1041	GO:0000156	phosphorelay response regulator activity
AF_1042	GO:0046872	metal ion binding
AF_1042	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility
AF_1042	GO:0006935	chemotaxis
AF_1042	GO:0000160	phosphorelay signal transduction system
AF_1042	GO:0005737	cytoplasm
AF_1044	GO:0005737	cytoplasm
AF_1044	GO:0006935	chemotaxis
AF_1044	GO:0007165	signal transduction
AF_1045	GO:0006935	chemotaxis
AF_1045	GO:0004888	transmembrane signaling receptor activity
AF_1045	GO:0007165	signal transduction
AF_1045	GO:0005886	plasma membrane
AF_1045	GO:0016021	integral component of membrane
AF_1049	GO:0000746	conjugation
AF_1049	GO:0005524	ATP binding
AF_1049	GO:0005737	cytoplasm
AF_1063	GO:0006935	chemotaxis
AF_1063	GO:0046872	metal ion binding
AF_1063	GO:0005737	cytoplasm
AF_1063	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility
AF_1063	GO:0000160	phosphorelay signal transduction system
AF_1064	GO:0005886	plasma membrane
AF_1064	GO:0005524	ATP binding
AF_1064	GO:0016887	ATPase activity
AF_1064	GO:0015633	ATPase-coupled zinc transmembrane transporter activity
AF_1066	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
AF_1066	GO:0006629	lipid metabolic process
AF_1069	GO:0005886	plasma membrane
AF_1069	GO:0015233	pantothenate transmembrane transporter activity
AF_1069	GO:0015081	sodium ion transmembrane transporter activity
AF_1069	GO:0015293	symporter activity
AF_1069	GO:0036376	sodium ion export across plasma membrane
AF_1069	GO:0016021	integral component of membrane
AF_1069	GO:0015887	pantothenate transmembrane transport
AF_1070	GO:0005524	ATP binding
AF_1070	GO:0010124	phenylacetate catabolic process
AF_1070	GO:0047475	phenylacetate-CoA ligase activity
AF_1097	GO:0004475	mannose-1-phosphate guanylyltransferase activity
AF_1097	GO:0005525	GTP binding
AF_1097	GO:0009298	GDP-mannose biosynthetic process
AF_1097	GO:0009103	lipopolysaccharide biosynthetic process
AF_1097	GO:0004476	mannose-6-phosphate isomerase activity
AF_1098	GO:0006099	tricarboxylic acid cycle
AF_1098	GO:0046872	metal ion binding
AF_1098	GO:0004333	fumarate hydratase activity
AF_1098	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1107	GO:0004518	nuclease activity
AF_1112	GO:0005737	cytoplasm
AF_1112	GO:0000408	EKC/KEOPS complex
AF_1112	GO:0061711	N(6)-L-threonylcarbamoyladenine synthase activity
AF_1112	GO:0002949	tRNA threonylcarbamoyladenosine modification
AF_1112	GO:0005506	iron ion binding
AF_1117	GO:0005737	cytoplasm
AF_1117	GO:0000287	magnesium ion binding
AF_1117	GO:0004654	polyribonucleotide nucleotidyltransferase activity
AF_1117	GO:0003723	RNA binding
AF_1117	GO:0006402	mRNA catabolic process
AF_1117	GO:0006396	RNA processing
AF_1122	GO:0070403	NAD+ binding
AF_1122	GO:0019605	butyrate metabolic process
AF_1122	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_1122	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity
AF_1125	GO:0018189	pyrroloquinoline quinone biosynthetic process
AF_1125	GO:0009975	cyclase activity
AF_1125	GO:0005506	iron ion binding
AF_1125	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1125	GO:0016491	oxidoreductase activity
AF_1125	GO:1904047	S-adenosyl-L-methionine binding
AF_1128	GO:0006412	translation
AF_1128	GO:0003735	structural constituent of ribosome
AF_1128	GO:0005840	ribosome
AF_1129	GO:0005840	ribosome
AF_1129	GO:0003735	structural constituent of ribosome
AF_1129	GO:0006412	translation
AF_1132	GO:0000287	magnesium ion binding
AF_1132	GO:0000015	phosphopyruvate hydratase complex
AF_1132	GO:0004634	phosphopyruvate hydratase activity
AF_1132	GO:0006096	glycolytic process
AF_1132	GO:0032889	regulation of vacuole fusion, non-autophagic
AF_1132	GO:0005576	extracellular region
AF_1132	GO:0009986	cell surface
AF_1133	GO:0015935	small ribosomal subunit
AF_1133	GO:0006412	translation
AF_1133	GO:0003735	structural constituent of ribosome
AF_1136	GO:0046677	response to antibiotic
AF_1136	GO:0005524	ATP binding
AF_1136	GO:0016887	ATPase activity
AF_1139	GO:0005524	ATP binding
AF_1139	GO:0016887	ATPase activity
AF_1142	GO:0016779	nucleotidyltransferase activity
AF_1142	GO:0045227	capsule polysaccharide biosynthetic process
AF_1144	GO:0016021	integral component of membrane
AF_1144	GO:0022857	transmembrane transporter activity
AF_1144	GO:0046677	response to antibiotic
AF_1144	GO:0005886	plasma membrane
AF_1145	GO:0019605	butyrate metabolic process
AF_1145	GO:0006084	acetyl-CoA metabolic process
AF_1145	GO:0003986	acetyl-CoA hydrolase activity
AF_1145	GO:0006083	acetate metabolic process
AF_1145	GO:0019679	propionate metabolic process, methylcitrate cycle
AF_1145	GO:0008775	acetate CoA-transferase activity
AF_1145	GO:0005737	cytoplasm
AF_1146	GO:0005829	cytosol
AF_1146	GO:0043531	ADP binding
AF_1146	GO:0004618	phosphoglycerate kinase activity
AF_1146	GO:0006094	gluconeogenesis
AF_1146	GO:0005524	ATP binding
AF_1146	GO:1903862	positive regulation of oxidative phosphorylation
AF_1146	GO:0006096	glycolytic process
AF_1147	GO:0005737	cytoplasm
AF_1147	GO:0103045	methione N-acyltransferase activity
AF_1147	GO:0004358	glutamate N-acetyltransferase activity
AF_1147	GO:0006526	arginine biosynthetic process
AF_1147	GO:0004042	acetyl-CoA:L-glutamate N-acetyltransferase activity
AF_1148	GO:0043200	response to amino acid
AF_1148	GO:0043201	response to leucine
AF_1148	GO:0043565	sequence-specific DNA binding
AF_1148	GO:0006524	alanine catabolic process
AF_1148	GO:0005829	cytosol
AF_1149	GO:0005524	ATP binding
AF_1149	GO:0004386	helicase activity
AF_1149	GO:0003676	nucleic acid binding
AF_1157	GO:0005524	ATP binding
AF_1157	GO:0006189	'de novo' IMP biosynthetic process
AF_1157	GO:0009113	purine nucleobase biosynthetic process
AF_1157	GO:0046872	metal ion binding
AF_1157	GO:0004637	phosphoribosylamine-glycine ligase activity
AF_1159	GO:0005886	plasma membrane
AF_1159	GO:0033179	proton-transporting V-type ATPase, V0 domain
AF_1159	GO:0015078	proton transmembrane transporter activity
AF_1159	GO:0006814	sodium ion transport
AF_1159	GO:0016021	integral component of membrane
AF_1164	GO:0033179	proton-transporting V-type ATPase, V0 domain
AF_1164	GO:0042777	plasma membrane ATP synthesis coupled proton transport
AF_1164	GO:0046961	proton-transporting ATPase activity, rotational mechanism
AF_1164	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
AF_1164	GO:0005524	ATP binding
AF_1166	GO:0042777	plasma membrane ATP synthesis coupled proton transport
AF_1166	GO:0046961	proton-transporting ATPase activity, rotational mechanism
AF_1166	GO:0005524	ATP binding
AF_1166	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
AF_1167	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
AF_1167	GO:0042777	plasma membrane ATP synthesis coupled proton transport
AF_1167	GO:0005524	ATP binding
AF_1168	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
AF_1168	GO:0042626	ATPase-coupled transmembrane transporter activity
AF_1168	GO:0042777	plasma membrane ATP synthesis coupled proton transport
AF_1168	GO:0006814	sodium ion transport
AF_1168	GO:0005524	ATP binding
AF_1169	GO:0005886	plasma membrane
AF_1169	GO:0016021	integral component of membrane
AF_1169	GO:0015225	biotin transmembrane transporter activity
AF_1170	GO:0016887	ATPase activity
AF_1170	GO:0005886	plasma membrane
AF_1170	GO:0005524	ATP binding
AF_1175	GO:0030435	sporulation resulting in formation of a cellular spore
AF_1175	GO:0050660	flavin adenine dinucleotide binding
AF_1175	GO:0003995	acyl-CoA dehydrogenase activity
AF_1177	GO:0070403	NAD+ binding
AF_1177	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity
AF_1177	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_1177	GO:0019605	butyrate metabolic process
AF_1184	GO:0046777	protein autophosphorylation
AF_1184	GO:0005524	ATP binding
AF_1184	GO:0006355	regulation of transcription, DNA-templated
AF_1184	GO:0009399	nitrogen fixation
AF_1184	GO:0004673	protein histidine kinase activity
AF_1184	GO:0005887	integral component of plasma membrane
AF_1184	GO:0009927	histidine phosphotransfer kinase activity
AF_1184	GO:0046872	metal ion binding
AF_1184	GO:0000155	phosphorelay sensor kinase activity
AF_1186	GO:0003938	IMP dehydrogenase activity
AF_1186	GO:0046872	metal ion binding
AF_1186	GO:0000166	nucleotide binding
AF_1186	GO:0006177	GMP biosynthetic process
AF_1190	GO:0019605	butyrate metabolic process
AF_1190	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_1190	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity
AF_1190	GO:0070403	NAD+ binding
AF_1191	GO:0008935	1,4-dihydroxy-2-naphthoyl-CoA synthase activity
AF_1191	GO:0005829	cytosol
AF_1191	GO:0009234	menaquinone biosynthetic process
AF_1191	GO:0071890	bicarbonate binding
AF_1192	GO:0018393	internal peptidyl-lysine acetylation
AF_1192	GO:0006979	response to oxidative stress
AF_1192	GO:0009408	response to heat
AF_1192	GO:0032462	regulation of protein homooligomerization
AF_1192	GO:0052858	peptidyl-lysine acetyltransferase activity
AF_1192	GO:0032991	protein-containing complex
AF_1192	GO:0005524	ATP binding
AF_1192	GO:0061733	peptide-lysine-N-acetyltransferase activity
AF_1192	GO:0042802	identical protein binding
AF_1192	GO:0046872	metal ion binding
AF_1195	GO:0003677	DNA binding
AF_1195	GO:0008047	enzyme activator activity
AF_1195	GO:0006282	regulation of DNA repair
AF_1195	GO:0009378	four-way junction helicase activity
AF_1195	GO:0005524	ATP binding
AF_1195	GO:0006310	DNA recombination
AF_1195	GO:0006281	DNA repair
AF_1195	GO:0017116	single-stranded DNA helicase activity
AF_1195	GO:0006261	DNA-dependent DNA replication
AF_1196	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
AF_1196	GO:0004497	monooxygenase activity
AF_1197	GO:0019605	butyrate metabolic process
AF_1197	GO:0003985	acetyl-CoA C-acetyltransferase activity
AF_1197	GO:0005737	cytoplasm
AF_1199	GO:0042952	beta-ketoadipate pathway
AF_1199	GO:0047569	3-oxoadipate CoA-transferase activity
AF_1202	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1202	GO:0046872	metal ion binding
AF_1202	GO:0055114	oxidation-reduction process
AF_1202	GO:0005886	plasma membrane
AF_1203	GO:0016491	oxidoreductase activity
AF_1203	GO:0046872	metal ion binding
AF_1203	GO:0018818	acetylene hydratase activity
AF_1203	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1203	GO:0043546	molybdopterin cofactor binding
AF_1206	GO:0047728	carnitine 3-dehydrogenase activity
AF_1206	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_1206	GO:0006631	fatty acid metabolic process
AF_1206	GO:0051287	NAD binding
AF_1206	GO:0042413	carnitine catabolic process
AF_1206	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
AF_1206	GO:0005737	cytoplasm
AF_1207	GO:0008888	glycerol dehydrogenase [NAD+] activity
AF_1207	GO:0019563	glycerol catabolic process
AF_1207	GO:0000287	magnesium ion binding
AF_1207	GO:0005737	cytoplasm
AF_1207	GO:0030145	manganese ion binding
AF_1210	GO:0046872	metal ion binding
AF_1210	GO:0016740	transferase activity
AF_1210	GO:0019475	L-lysine catabolic process to acetate
AF_1211	GO:0032991	protein-containing complex
AF_1211	GO:0046872	metal ion binding
AF_1211	GO:0009408	response to heat
AF_1211	GO:0032462	regulation of protein homooligomerization
AF_1211	GO:0042802	identical protein binding
AF_1211	GO:0005524	ATP binding
AF_1211	GO:0018393	internal peptidyl-lysine acetylation
AF_1211	GO:0052858	peptidyl-lysine acetyltransferase activity
AF_1211	GO:0061733	peptide-lysine-N-acetyltransferase activity
AF_1211	GO:0006979	response to oxidative stress
AF_1214	GO:0106141	flavin prenyltransferase activity
AF_1215	GO:0000917	division septum assembly
AF_1215	GO:0003924	GTPase activity
AF_1215	GO:0005525	GTP binding
AF_1215	GO:0051258	protein polymerization
AF_1215	GO:0005737	cytoplasm
AF_1215	GO:0043093	FtsZ-dependent cytokinesis
AF_1215	GO:0032153	cell division site
AF_1216	GO:0006430	lysyl-tRNA aminoacylation
AF_1216	GO:0004824	lysine-tRNA ligase activity
AF_1216	GO:0005524	ATP binding
AF_1216	GO:0005737	cytoplasm
AF_1216	GO:0000049	tRNA binding
AF_1219	GO:0004659	prenyltransferase activity
AF_1219	GO:0000287	magnesium ion binding
AF_1222	GO:0006814	sodium ion transport
AF_1222	GO:0015293	symporter activity
AF_1222	GO:0043879	glycolate transmembrane transporter activity
AF_1222	GO:0005887	integral component of plasma membrane
AF_1222	GO:0015123	acetate transmembrane transporter activity
AF_1224	GO:0016021	integral component of membrane
AF_1224	GO:0005886	plasma membrane
AF_1224	GO:0004521	endoribonuclease activity
AF_1224	GO:0003723	RNA binding
AF_1224	GO:0006402	mRNA catabolic process
AF_1229	GO:0005886	plasma membrane
AF_1229	GO:0016021	integral component of membrane
AF_1234	GO:0016787	hydrolase activity
AF_1238	GO:0006559	L-phenylalanine catabolic process
AF_1238	GO:0047540	2-enoate reductase activity
AF_1238	GO:0010181	FMN binding
AF_1238	GO:0051536	iron-sulfur cluster binding
AF_1238	GO:0046872	metal ion binding
AF_1240	GO:0000162	tryptophan biosynthetic process
AF_1240	GO:0004834	tryptophan synthase activity
AF_1240	GO:0030170	pyridoxal phosphate binding
AF_1240	GO:0052684	L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity
AF_1241	GO:0008483	transaminase activity
AF_1241	GO:0006782	protoporphyrinogen IX biosynthetic process
AF_1241	GO:0030170	pyridoxal phosphate binding
AF_1241	GO:0005737	cytoplasm
AF_1241	GO:0042286	glutamate-1-semialdehyde 2,1-aminomutase activity
AF_1241	GO:0006779	porphyrin-containing compound biosynthetic process
AF_1242	GO:0006782	protoporphyrinogen IX biosynthetic process
AF_1242	GO:0006783	heme biosynthetic process
AF_1242	GO:0004418	hydroxymethylbilane synthase activity
AF_1242	GO:0005737	cytoplasm
AF_1242	GO:0018160	peptidyl-pyrromethane cofactor linkage
AF_1243	GO:0004851	uroporphyrin-III C-methyltransferase activity
AF_1243	GO:0009236	cobalamin biosynthetic process
AF_1243	GO:0032259	methylation
AF_1243	GO:0019354	siroheme biosynthetic process
AF_1243	GO:0055114	oxidation-reduction process
AF_1245	GO:0016021	integral component of membrane
AF_1245	GO:0006813	potassium ion transport
AF_1245	GO:0005886	plasma membrane
AF_1245	GO:0015299	solute:proton antiporter activity
AF_1247	GO:0046872	metal ion binding
AF_1247	GO:0005737	cytoplasm
AF_1247	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1247	GO:0035596	methylthiotransferase activity
AF_1247	GO:0006400	tRNA modification
AF_1248	GO:0016021	integral component of membrane
AF_1248	GO:0005886	plasma membrane
AF_1252	GO:0015451	decarboxylation-driven active transmembrane transporter activity
AF_1252	GO:0008948	oxaloacetate decarboxylase activity
AF_1252	GO:0006814	sodium ion transport
AF_1255	GO:0005737	cytoplasm
AF_1255	GO:0004585	ornithine carbamoyltransferase activity
AF_1255	GO:0016597	amino acid binding
AF_1255	GO:0006526	arginine biosynthetic process
AF_1256	GO:0050568	protein-glutamine glutaminase activity
AF_1256	GO:0006935	chemotaxis
AF_1256	GO:0005737	cytoplasm
AF_1256	GO:0000156	phosphorelay response regulator activity
AF_1256	GO:0008984	protein-glutamate methylesterase activity
AF_1256	GO:0018277	protein deamination
AF_1256	GO:0006482	protein demethylation
AF_1257	GO:0016423	tRNA (guanine) methyltransferase activity
AF_1257	GO:0003723	RNA binding
AF_1257	GO:0030488	tRNA methylation
AF_1259	GO:0016887	ATPase activity
AF_1259	GO:0031460	glycine betaine transport
AF_1259	GO:0005524	ATP binding
AF_1259	GO:0016020	membrane
AF_1259	GO:0006865	amino acid transport
AF_1260	GO:0006541	glutamine metabolic process
AF_1260	GO:0006189	'de novo' IMP biosynthetic process
AF_1260	GO:0004642	phosphoribosylformylglycinamidine synthase activity
AF_1260	GO:0005737	cytoplasm
AF_1260	GO:0005524	ATP binding
AF_1260	GO:0004359	glutaminase activity
AF_1261	GO:0102391	decanoate-CoA ligase activity
AF_1261	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_1261	GO:0005524	ATP binding
AF_1261	GO:0046872	metal ion binding
AF_1262	GO:0010181	FMN binding
AF_1262	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1262	GO:0005737	cytoplasm
AF_1262	GO:0016491	oxidoreductase activity
AF_1262	GO:0046872	metal ion binding
AF_1265	GO:0016787	hydrolase activity
AF_1271	GO:0043727	5-amino-4-imidazole carboxylate lyase activity
AF_1271	GO:0006189	'de novo' IMP biosynthetic process
AF_1271	GO:0004638	phosphoribosylaminoimidazole carboxylase activity
AF_1272	GO:0005524	ATP binding
AF_1272	GO:0009236	cobalamin biosynthetic process
AF_1272	GO:0006189	'de novo' IMP biosynthetic process
AF_1272	GO:0004639	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AF_1273	GO:0005737	cytoplasm
AF_1273	GO:0005524	ATP binding
AF_1273	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AF_1273	GO:0006541	glutamine metabolic process
AF_1273	GO:0006526	arginine biosynthetic process
AF_1273	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
AF_1273	GO:0006807	nitrogen compound metabolic process
AF_1273	GO:0044205	'de novo' UMP biosynthetic process
AF_1273	GO:0005951	carbamoyl-phosphate synthase complex
AF_1274	GO:0005524	ATP binding
AF_1274	GO:0006526	arginine biosynthetic process
AF_1274	GO:0044205	'de novo' UMP biosynthetic process
AF_1274	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AF_1274	GO:0046872	metal ion binding
AF_1275	GO:0005886	plasma membrane
AF_1275	GO:0016021	integral component of membrane
AF_1275	GO:0016787	hydrolase activity
AF_1275	GO:0016740	transferase activity
AF_1275	GO:0006189	'de novo' IMP biosynthetic process
AF_1277	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AF_1277	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
AF_1277	GO:0006541	glutamine metabolic process
AF_1277	GO:0005737	cytoplasm
AF_1277	GO:0005951	carbamoyl-phosphate synthase complex
AF_1277	GO:0006807	nitrogen compound metabolic process
AF_1277	GO:0044205	'de novo' UMP biosynthetic process
AF_1277	GO:0005524	ATP binding
AF_1277	GO:0006526	arginine biosynthetic process
AF_1280	GO:0003991	acetylglutamate kinase activity
AF_1280	GO:0005524	ATP binding
AF_1280	GO:0042450	arginine biosynthetic process via ornithine
AF_1280	GO:0005737	cytoplasm
AF_1284	GO:0006662	glycerol ether metabolic process
AF_1284	GO:0015035	protein disulfide oxidoreductase activity
AF_1284	GO:0045454	cell redox homeostasis
AF_1285	GO:0016021	integral component of membrane
AF_1285	GO:0008270	zinc ion binding
AF_1285	GO:0004222	metalloendopeptidase activity
AF_1285	GO:0030163	protein catabolic process
AF_1285	GO:0004176	ATP-dependent peptidase activity
AF_1285	GO:0005886	plasma membrane
AF_1285	GO:0005524	ATP binding
AF_1286	GO:0045150	acetoin catabolic process
AF_1287	GO:0004321	fatty-acyl-CoA synthase activity
AF_1287	GO:0006633	fatty acid biosynthetic process
AF_1287	GO:0006637	acyl-CoA metabolic process
AF_1287	GO:0005524	ATP binding
AF_1287	GO:0015645	fatty acid ligase activity
AF_1289	GO:0005524	ATP binding
AF_1289	GO:0005525	GTP binding
AF_1289	GO:0003924	GTPase activity
AF_1291	GO:0042952	beta-ketoadipate pathway
AF_1291	GO:0033812	3-oxoadipyl-CoA thiolase activity
AF_1291	GO:0019619	3,4-dihydroxybenzoate catabolic process
AF_1293	GO:0050660	flavin adenine dinucleotide binding
AF_1293	GO:0003995	acyl-CoA dehydrogenase activity
AF_1293	GO:0006635	fatty acid beta-oxidation
AF_1297	GO:0005524	ATP binding
AF_1297	GO:0004222	metalloendopeptidase activity
AF_1297	GO:0016021	integral component of membrane
AF_1297	GO:0004176	ATP-dependent peptidase activity
AF_1297	GO:0008270	zinc ion binding
AF_1297	GO:0030163	protein catabolic process
AF_1297	GO:0005886	plasma membrane
AF_1300	GO:0016887	ATPase activity
AF_1300	GO:0005524	ATP binding
AF_1300	GO:0005886	plasma membrane
AF_1300	GO:0010165	response to X-ray
AF_1304	GO:0005737	cytoplasm
AF_1304	GO:0004807	triose-phosphate isomerase activity
AF_1304	GO:0006094	gluconeogenesis
AF_1304	GO:0006096	glycolytic process
AF_1305	GO:0016840	carbon-nitrogen lyase activity
AF_1305	GO:0006730	one-carbon metabolic process
AF_1305	GO:0046294	formaldehyde catabolic process
AF_1305	GO:0005737	cytoplasm
AF_1305	GO:0016051	carbohydrate biosynthetic process
AF_1308	GO:0006235	dTTP biosynthetic process
AF_1308	GO:0005524	ATP binding
AF_1308	GO:0004798	thymidylate kinase activity
AF_1308	GO:0006233	dTDP biosynthetic process
AF_1309	GO:0005886	plasma membrane
AF_1309	GO:0033306	phytol metabolic process
AF_1309	GO:0010189	vitamin E biosynthetic process
AF_1309	GO:0016021	integral component of membrane
AF_1309	GO:0010276	phytol kinase activity
AF_1309	GO:0000166	nucleotide binding
AF_1311	GO:0046872	metal ion binding
AF_1311	GO:0005737	cytoplasm
AF_1311	GO:0006779	porphyrin-containing compound biosynthetic process
AF_1311	GO:0004109	coproporphyrinogen oxidase activity
AF_1311	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1315	GO:0036412	acetyl-CoA:oxalate CoA-transferase
AF_1316	GO:0005737	cytoplasm
AF_1316	GO:0030170	pyridoxal phosphate binding
AF_1316	GO:0009088	threonine biosynthetic process
AF_1316	GO:0004795	threonine synthase activity
AF_1320	GO:0006541	glutamine metabolic process
AF_1320	GO:0005524	ATP binding
AF_1320	GO:0016462	pyrophosphatase activity
AF_1320	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity
AF_1321	GO:0002143	tRNA wobble position uridine thiolation
AF_1321	GO:0000049	tRNA binding
AF_1321	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1321	GO:0002144	cytosolic tRNA wobble base thiouridylase complex
AF_1321	GO:0046872	metal ion binding
AF_1321	GO:0005524	ATP binding
AF_1321	GO:0016740	transferase activity
AF_1324	GO:0005998	xylulose catabolic process
AF_1324	GO:0042732	D-xylose metabolic process
AF_1324	GO:0004856	xylulokinase activity
AF_1324	GO:0005524	ATP binding
AF_1326	GO:0005525	GTP binding
AF_1326	GO:0000917	division septum assembly
AF_1326	GO:0046872	metal ion binding
AF_1328	GO:0055130	D-alanine catabolic process
AF_1328	GO:0008718	D-amino-acid dehydrogenase activity
AF_1336	GO:0009236	cobalamin biosynthetic process
AF_1336	GO:0048472	threonine-phosphate decarboxylase activity
AF_1336	GO:0015420	ATPase-coupled vitamin B12 transmembrane transporter activity
AF_1336	GO:0005886	plasma membrane
AF_1336	GO:0016021	integral component of membrane
AF_1338	GO:0003824	catalytic activity
AF_1338	GO:0009236	cobalamin biosynthetic process
AF_1338	GO:0006541	glutamine metabolic process
AF_1338	GO:0015420	ATPase-coupled vitamin B12 transmembrane transporter activity
AF_1339	GO:0000049	tRNA binding
AF_1339	GO:0005840	ribosome
AF_1339	GO:0019843	rRNA binding
AF_1339	GO:0003735	structural constituent of ribosome
AF_1339	GO:0006412	translation
AF_1340	GO:0006099	tricarboxylic acid cycle
AF_1340	GO:0005975	carbohydrate metabolic process
AF_1340	GO:0005737	cytoplasm
AF_1340	GO:0004108	citrate (Si)-synthase activity
AF_1341	GO:0006213	pyrimidine nucleoside metabolic process
AF_1341	GO:0006206	pyrimidine nucleobase metabolic process
AF_1341	GO:0009032	thymidine phosphorylase activity
AF_1341	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity
AF_1342	GO:0009032	thymidine phosphorylase activity
AF_1342	GO:0006213	pyrimidine nucleoside metabolic process
AF_1342	GO:0006206	pyrimidine nucleobase metabolic process
AF_1342	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity
AF_1343	GO:0046872	metal ion binding
AF_1343	GO:0004416	hydroxyacylglutathione hydrolase activity
AF_1343	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
AF_1344	GO:0005887	integral component of plasma membrane
AF_1344	GO:0033281	TAT protein transport complex
AF_1344	GO:0043953	protein transport by the Tat complex
AF_1344	GO:0008320	protein transmembrane transporter activity
AF_1349	GO:0009055	electron transfer activity
AF_1349	GO:0005506	iron ion binding
AF_1349	GO:0072592	oxygen metabolic process
AF_1349	GO:0009636	response to toxic substance
AF_1350	GO:0004416	hydroxyacylglutathione hydrolase activity
AF_1350	GO:0046872	metal ion binding
AF_1350	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
AF_1354	GO:0016021	integral component of membrane
AF_1354	GO:0005886	plasma membrane
AF_1354	GO:0015297	antiporter activity
AF_1354	GO:0015081	sodium ion transmembrane transporter activity
AF_1354	GO:0006885	regulation of pH
AF_1356	GO:0042301	phosphate ion binding
AF_1357	GO:0016021	integral component of membrane
AF_1357	GO:0005886	plasma membrane
AF_1357	GO:0005315	inorganic phosphate transmembrane transporter activity
AF_1357	GO:0006817	phosphate ion transport
AF_1358	GO:0005887	integral component of plasma membrane
AF_1358	GO:0005315	inorganic phosphate transmembrane transporter activity
AF_1358	GO:0035435	phosphate ion transmembrane transport
AF_1359	GO:0005315	inorganic phosphate transmembrane transporter activity
AF_1359	GO:0005524	ATP binding
AF_1359	GO:0015415	ATPase-coupled phosphate ion transmembrane transporter activity
AF_1359	GO:0016887	ATPase activity
AF_1359	GO:0005886	plasma membrane
AF_1360	GO:2000186	negative regulation of phosphate transmembrane transport
AF_1360	GO:0045936	negative regulation of phosphate metabolic process
AF_1360	GO:0030643	cellular phosphate ion homeostasis
AF_1360	GO:0042803	protein homodimerization activity
AF_1360	GO:0005737	cytoplasm
AF_1360	GO:0006817	phosphate ion transport
AF_1364	GO:0005525	GTP binding
AF_1364	GO:0042254	ribosome biogenesis
AF_1364	GO:0003924	GTPase activity
AF_1364	GO:0000287	magnesium ion binding
AF_1364	GO:0005737	cytoplasm
AF_1365	GO:0016829	lyase activity
AF_1366	GO:0008270	zinc ion binding
AF_1366	GO:0046944	protein carbamoylation
AF_1366	GO:0016743	carboxyl- or carbamoyltransferase activity
AF_1366	GO:0003725	double-stranded RNA binding
AF_1366	GO:0016874	ligase activity
AF_1367	GO:0016151	nickel cation binding
AF_1367	GO:0006464	cellular protein modification process
AF_1367	GO:0051604	protein maturation
AF_1367	GO:0008270	zinc ion binding
AF_1368	GO:0005525	GTP binding
AF_1368	GO:0016151	nickel cation binding
AF_1368	GO:0051604	protein maturation
AF_1368	GO:0016787	hydrolase activity
AF_1370	GO:0051604	protein maturation
AF_1370	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1370	GO:0070025	carbon monoxide binding
AF_1370	GO:0005506	iron ion binding
AF_1372	GO:0005737	cytoplasm
AF_1372	GO:0016151	nickel cation binding
AF_1372	GO:0047985	hydrogen dehydrogenase activity
AF_1372	GO:0008901	ferredoxin hydrogenase activity
AF_1373	GO:0051538	3 iron, 4 sulfur cluster binding
AF_1373	GO:0046872	metal ion binding
AF_1373	GO:0047985	hydrogen dehydrogenase activity
AF_1373	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1373	GO:0051537	2 iron, 2 sulfur cluster binding
AF_1373	GO:0005737	cytoplasm
AF_1378	GO:0004190	aspartic-type endopeptidase activity
AF_1378	GO:0004175	endopeptidase activity
AF_1378	GO:0008047	enzyme activator activity
AF_1378	GO:0046872	metal ion binding
AF_1378	GO:0006464	cellular protein modification process
AF_1378	GO:0016485	protein processing
AF_1380	GO:0016151	nickel cation binding
AF_1380	GO:0042597	periplasmic space
AF_1380	GO:0033748	hydrogenase (acceptor) activity
AF_1380	GO:0008901	ferredoxin hydrogenase activity
AF_1381	GO:0047806	cytochrome-c3 hydrogenase activity
AF_1381	GO:0008901	ferredoxin hydrogenase activity
AF_1381	GO:0051538	3 iron, 4 sulfur cluster binding
AF_1381	GO:0046872	metal ion binding
AF_1381	GO:0042597	periplasmic space
AF_1381	GO:0009375	ferredoxin hydrogenase complex
AF_1381	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1384	GO:0000160	phosphorelay signal transduction system
AF_1389	GO:0016887	ATPase activity
AF_1389	GO:0015658	branched-chain amino acid transmembrane transporter activity
AF_1389	GO:0015807	L-amino acid transport
AF_1389	GO:0015808	L-alanine transport
AF_1389	GO:0005886	plasma membrane
AF_1389	GO:0042941	D-alanine transport
AF_1389	GO:0005524	ATP binding
AF_1390	GO:1903805	L-valine import across plasma membrane
AF_1390	GO:0098713	leucine import across plasma membrane
AF_1390	GO:0005304	L-valine transmembrane transporter activity
AF_1390	GO:0015808	L-alanine transport
AF_1390	GO:0042941	D-alanine transport
AF_1390	GO:0015192	L-phenylalanine transmembrane transporter activity
AF_1390	GO:0005886	plasma membrane
AF_1390	GO:0005524	ATP binding
AF_1390	GO:0016887	ATPase activity
AF_1390	GO:0015190	L-leucine transmembrane transporter activity
AF_1390	GO:0015188	L-isoleucine transmembrane transporter activity
AF_1390	GO:1903806	L-isoleucine import across plasma membrane
AF_1398	GO:0016829	lyase activity
AF_1398	GO:0000250	lanosterol synthase activity
AF_1398	GO:0042300	beta-amyrin synthase activity
AF_1398	GO:0005886	plasma membrane
AF_1398	GO:0005811	lipid droplet
AF_1398	GO:0051007	squalene-hopene cyclase activity
AF_1398	GO:0019746	hopanoid biosynthetic process
AF_1399	GO:0051205	protein insertion into membrane
AF_1399	GO:0043165	Gram-negative-bacterium-type cell outer membrane assembly
AF_1399	GO:0009279	cell outer membrane
AF_1401	GO:0016887	ATPase activity
AF_1401	GO:0015439	ATPase-coupled heme transmembrane transporter activity
AF_1401	GO:0005886	plasma membrane
AF_1401	GO:0005524	ATP binding
AF_1402	GO:0033214	siderophore-dependent iron import into cell
AF_1402	GO:0022857	transmembrane transporter activity
AF_1402	GO:0005887	integral component of plasma membrane
AF_1409	GO:0008170	N-methyltransferase activity
AF_1409	GO:0008168	methyltransferase activity
AF_1409	GO:0005737	cytoplasm
AF_1409	GO:0009307	DNA restriction-modification system
AF_1409	GO:0003677	DNA binding
AF_1409	GO:0009007	site-specific DNA-methyltransferase (adenine-specific) activity
AF_1415	GO:0005247	voltage-gated chloride channel activity
AF_1415	GO:0005887	integral component of plasma membrane
AF_1415	GO:0015297	antiporter activity
AF_1417	GO:0005777	peroxisome
AF_1417	GO:0019265	glycine biosynthetic process, by transamination of glyoxylate
AF_1417	GO:0008453	alanine-glyoxylate transaminase activity
AF_1417	GO:0004760	serine-pyruvate transaminase activity
AF_1418	GO:0097171	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AF_1418	GO:0005524	ATP binding
AF_1418	GO:0033785	heptose 7-phosphate kinase activity
AF_1418	GO:0033786	heptose-1-phosphate adenylyltransferase activity
AF_1418	GO:0016773	phosphotransferase activity, alcohol group as acceptor
AF_1419	GO:0009156	ribonucleoside monophosphate biosynthetic process
AF_1419	GO:0004749	ribose phosphate diphosphokinase activity
AF_1419	GO:0005737	cytoplasm
AF_1419	GO:0005524	ATP binding
AF_1419	GO:0016301	kinase activity
AF_1419	GO:0000287	magnesium ion binding
AF_1419	GO:0006015	5-phosphoribose 1-diphosphate biosynthetic process
AF_1419	GO:0009116	nucleoside metabolic process
AF_1419	GO:0009165	nucleotide biosynthetic process
AF_1420	GO:0016021	integral component of membrane
AF_1421	GO:0016021	integral component of membrane
AF_1421	GO:0005886	plasma membrane
AF_1422	GO:0047689	aspartate racemase activity
AF_1422	GO:0008881	glutamate racemase activity
AF_1422	GO:0006807	nitrogen compound metabolic process
AF_1423	GO:0006203	dGTP catabolic process
AF_1423	GO:0008832	dGTPase activity
AF_1424	GO:0003723	RNA binding
AF_1424	GO:0004826	phenylalanine-tRNA ligase activity
AF_1424	GO:0000287	magnesium ion binding
AF_1424	GO:0005524	ATP binding
AF_1424	GO:0005737	cytoplasm
AF_1424	GO:0006432	phenylalanyl-tRNA aminoacylation
AF_1425	GO:0046872	metal ion binding
AF_1425	GO:0046537	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
AF_1425	GO:0006096	glycolytic process
AF_1426	GO:0016021	integral component of membrane
AF_1426	GO:0005886	plasma membrane
AF_1426	GO:0015267	channel activity
AF_1435	GO:0005737	cytoplasm
AF_1435	GO:0005524	ATP binding
AF_1435	GO:0003963	RNA-3'-phosphate cyclase activity
AF_1435	GO:0006396	RNA processing
AF_1440	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
AF_1440	GO:0006412	translation
AF_1440	GO:0005524	ATP binding
AF_1442	GO:0006094	gluconeogenesis
AF_1442	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity
AF_1442	GO:0000287	magnesium ion binding
AF_1442	GO:0004332	fructose-bisphosphate aldolase activity
AF_1443	GO:0009649	entrainment of circadian clock
AF_1443	GO:0006355	regulation of transcription, DNA-templated
AF_1443	GO:0007623	circadian rhythm
AF_1443	GO:0004712	protein serine/threonine/tyrosine kinase activity
AF_1443	GO:0004674	protein serine/threonine kinase activity
AF_1443	GO:0000287	magnesium ion binding
AF_1443	GO:0042802	identical protein binding
AF_1443	GO:0003677	DNA binding
AF_1443	GO:0005524	ATP binding
AF_1443	GO:0070297	regulation of phosphorelay signal transduction system
AF_1443	GO:0042754	negative regulation of circadian rhythm
AF_1448	GO:0043565	sequence-specific DNA binding
AF_1450	GO:0046872	metal ion binding
AF_1450	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1450	GO:0043364	glycyl-radical enzyme activating activity
AF_1452	GO:0000155	phosphorelay sensor kinase activity
AF_1452	GO:0005524	ATP binding
AF_1452	GO:0005886	plasma membrane
AF_1453	GO:0000049	tRNA binding
AF_1453	GO:0004825	methionine-tRNA ligase activity
AF_1453	GO:0046872	metal ion binding
AF_1453	GO:0005524	ATP binding
AF_1453	GO:0005737	cytoplasm
AF_1453	GO:0006431	methionyl-tRNA aminoacylation
AF_1458	GO:0006355	regulation of transcription, DNA-templated
AF_1458	GO:0000716	transcription-coupled nucleotide-excision repair, DNA damage recognition
AF_1458	GO:0004386	helicase activity
AF_1458	GO:0003684	damaged DNA binding
AF_1458	GO:0005524	ATP binding
AF_1458	GO:0005737	cytoplasm
AF_1461	GO:0009055	electron transfer activity
AF_1461	GO:0005506	iron ion binding
AF_1461	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1463	GO:0009435	NAD biosynthetic process
AF_1463	GO:0005737	cytoplasm
AF_1463	GO:0044318	L-aspartate:fumarate oxidoreductase activity
AF_1463	GO:0008734	L-aspartate oxidase activity
AF_1469	GO:0055085	transmembrane transport
AF_1469	GO:0005886	plasma membrane
AF_1469	GO:0022857	transmembrane transporter activity
AF_1469	GO:0005524	ATP binding
AF_1469	GO:0016887	ATPase activity
AF_1470	GO:0015562	efflux transmembrane transporter activity
AF_1470	GO:0008559	ATPase-coupled xenobiotic transmembrane transporter activity
AF_1470	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane
AF_1470	GO:0046677	response to antibiotic
AF_1470	GO:0005524	ATP binding
AF_1470	GO:0005887	integral component of plasma membrane
AF_1470	GO:0016887	ATPase activity
AF_1472	GO:0008134	transcription factor binding
AF_1472	GO:0005524	ATP binding
AF_1472	GO:0043565	sequence-specific DNA binding
AF_1472	GO:0000160	phosphorelay signal transduction system
AF_1472	GO:0045893	positive regulation of transcription, DNA-templated
AF_1473	GO:0000160	phosphorelay signal transduction system
AF_1475	GO:0016021	integral component of membrane
AF_1475	GO:0033013	tetrapyrrole metabolic process
AF_1475	GO:0046906	tetrapyrrole binding
AF_1475	GO:0005886	plasma membrane
AF_1476	GO:0004493	methylmalonyl-CoA epimerase activity
AF_1476	GO:0046491	L-methylmalonyl-CoA metabolic process
AF_1476	GO:0016829	lyase activity
AF_1483	GO:0005886	plasma membrane
AF_1483	GO:0005524	ATP binding
AF_1483	GO:0016021	integral component of membrane
AF_1483	GO:0006527	arginine catabolic process
AF_1483	GO:0000155	phosphorelay sensor kinase activity
AF_1484	GO:0005524	ATP binding
AF_1485	GO:0046872	metal ion binding
AF_1485	GO:0008479	queuine tRNA-ribosyltransferase activity
AF_1485	GO:0008616	queuosine biosynthetic process
AF_1485	GO:0101030	tRNA-guanine transglycosylation
AF_1486	GO:0006107	oxaloacetate metabolic process
AF_1486	GO:0006099	tricarboxylic acid cycle
AF_1486	GO:0008964	phosphoenolpyruvate carboxylase activity
AF_1486	GO:0000287	magnesium ion binding
AF_1486	GO:0015977	carbon fixation
AF_1488	GO:0005737	cytoplasm
AF_1488	GO:0000309	nicotinamide-nucleotide adenylyltransferase activity
AF_1488	GO:0005524	ATP binding
AF_1488	GO:0009435	NAD biosynthetic process
AF_1488	GO:0042802	identical protein binding
AF_1488	GO:0016787	hydrolase activity
AF_1490	GO:0022625	cytosolic large ribosomal subunit
AF_1490	GO:0003723	RNA binding
AF_1490	GO:0006417	regulation of translation
AF_1490	GO:0000470	maturation of LSU-rRNA
AF_1490	GO:0006412	translation
AF_1490	GO:0000049	tRNA binding
AF_1490	GO:0003735	structural constituent of ribosome
AF_1490	GO:0019843	rRNA binding
AF_1491	GO:0070180	large ribosomal subunit rRNA binding
AF_1491	GO:0005840	ribosome
AF_1491	GO:0006412	translation
AF_1491	GO:0042254	ribosome biogenesis
AF_1497	GO:0005737	cytoplasm
AF_1497	GO:0009423	chorismate biosynthetic process
AF_1497	GO:0009073	aromatic amino acid family biosynthetic process
AF_1497	GO:0003866	3-phosphoshikimate 1-carboxyvinyltransferase activity
AF_1506	GO:0009089	lysine biosynthetic process via diaminopimelate
AF_1506	GO:0009088	threonine biosynthetic process
AF_1506	GO:0071266	'de novo' L-methionine biosynthetic process
AF_1506	GO:0046983	protein dimerization activity
AF_1506	GO:0050661	NADP binding
AF_1506	GO:0051287	NAD binding
AF_1506	GO:0004073	aspartate-semialdehyde dehydrogenase activity
AF_1506	GO:0009097	isoleucine biosynthetic process
AF_1506	GO:0019877	diaminopimelate biosynthetic process
AF_1509	GO:0102007	acyl-L-homoserine-lactone lactonohydrolase activity
AF_1509	GO:0046872	metal ion binding
AF_1510	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_1510	GO:0102391	decanoate-CoA ligase activity
AF_1510	GO:0005524	ATP binding
AF_1511	GO:0009361	succinate-CoA ligase complex (ADP-forming)
AF_1511	GO:0042709	succinate-CoA ligase complex
AF_1511	GO:0000166	nucleotide binding
AF_1511	GO:0004775	succinate-CoA ligase (ADP-forming) activity
AF_1511	GO:0004776	succinate-CoA ligase (GDP-forming) activity
AF_1511	GO:0009142	nucleoside triphosphate biosynthetic process
AF_1511	GO:0006099	tricarboxylic acid cycle
AF_1511	GO:0004550	nucleoside diphosphate kinase activity
AF_1512	GO:0009977	proton motive force dependent protein transmembrane transporter activity
AF_1512	GO:0033281	TAT protein transport complex
AF_1512	GO:0005887	integral component of plasma membrane
AF_1512	GO:0043953	protein transport by the Tat complex
AF_1512	GO:0065002	intracellular protein transmembrane transport
AF_1515	GO:0016021	integral component of membrane
AF_1515	GO:0005524	ATP binding
AF_1515	GO:0000155	phosphorelay sensor kinase activity
AF_1515	GO:0005886	plasma membrane
AF_1516	GO:0003677	DNA binding
AF_1518	GO:0016829	lyase activity
AF_1520	GO:0009055	electron transfer activity
AF_1520	GO:0046872	metal ion binding
AF_1520	GO:0010181	FMN binding
AF_1521	GO:0042278	purine nucleoside metabolic process
AF_1521	GO:0060701	negative regulation of ribonuclease activity
AF_1521	GO:0008428	ribonuclease inhibitor activity
AF_1521	GO:0019213	deacetylase activity
AF_1521	GO:0001883	purine nucleoside binding
AF_1522	GO:0005737	cytoplasm
AF_1522	GO:0005524	ATP binding
AF_1522	GO:0000049	tRNA binding
AF_1522	GO:0051392	tRNA N-acetyltransferase activity
AF_1522	GO:0002101	tRNA wobble cytosine modification
AF_1522	GO:0051391	tRNA acetylation
AF_1537	GO:0018771	2-hydroxy-6-oxonona-2,4-dienedioate hydrolase activity
AF_1537	GO:0042803	protein homodimerization activity
AF_1537	GO:0019380	3-phenylpropionate catabolic process
AF_1537	GO:0005737	cytoplasm
AF_1537	GO:0052823	2-hydroxy-6-oxonona-2,4,7-trienedioate hydrolase activity
AF_1538	GO:0016021	integral component of membrane
AF_1538	GO:0005886	plasma membrane
AF_1539	GO:0005829	cytosol
AF_1539	GO:0009361	succinate-CoA ligase complex (ADP-forming)
AF_1539	GO:0000166	nucleotide binding
AF_1539	GO:0006099	tricarboxylic acid cycle
AF_1539	GO:0004775	succinate-CoA ligase (ADP-forming) activity
AF_1539	GO:0004776	succinate-CoA ligase (GDP-forming) activity
AF_1540	GO:0005525	GTP binding
AF_1540	GO:0006099	tricarboxylic acid cycle
AF_1540	GO:0004776	succinate-CoA ligase (GDP-forming) activity
AF_1540	GO:0004775	succinate-CoA ligase (ADP-forming) activity
AF_1540	GO:0000287	magnesium ion binding
AF_1540	GO:0005524	ATP binding
AF_1541	GO:0022857	transmembrane transporter activity
AF_1541	GO:0016021	integral component of membrane
AF_1541	GO:0005886	plasma membrane
AF_1542	GO:0003677	DNA binding
AF_1542	GO:0046872	metal ion binding
AF_1546	GO:0055085	transmembrane transport
AF_1546	GO:0016021	integral component of membrane
AF_1546	GO:0005886	plasma membrane
AF_1551	GO:0015979	photosynthesis
AF_1551	GO:0008299	isoprenoid biosynthetic process
AF_1551	GO:0004659	prenyltransferase activity
AF_1551	GO:0046872	metal ion binding
AF_1553	GO:0003950	NAD+ ADP-ribosyltransferase activity
AF_1553	GO:0016772	transferase activity, transferring phosphorus-containing groups
AF_1553	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation
AF_1554	GO:0019430	removal of superoxide radicals
AF_1554	GO:0005737	cytoplasm
AF_1554	GO:0004791	thioredoxin-disulfide reductase activity
AF_1556	GO:0005524	ATP binding
AF_1556	GO:0006400	tRNA modification
AF_1556	GO:0000049	tRNA binding
AF_1556	GO:0016783	sulfurtransferase activity
AF_1556	GO:0005737	cytoplasm
AF_1558	GO:0003677	DNA binding
AF_1558	GO:0030261	chromosome condensation
AF_1558	GO:0006260	DNA replication
AF_1558	GO:0005737	cytoplasm
AF_1558	GO:0007062	sister chromatid cohesion
AF_1558	GO:0005524	ATP binding
AF_1558	GO:0005694	chromosome
AF_1563	GO:0016787	hydrolase activity
AF_1580	GO:0051301	cell division
AF_1580	GO:0005737	cytoplasm
AF_1580	GO:0051304	chromosome separation
AF_1587	GO:0019284	L-methionine salvage from S-adenosylmethionine
AF_1587	GO:0043715	2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity
AF_1587	GO:0000287	magnesium ion binding
AF_1587	GO:0016984	ribulose-bisphosphate carboxylase activity
AF_1587	GO:0015977	carbon fixation
AF_1587	GO:0019509	L-methionine salvage from methylthioadenosine
AF_1595	GO:0002098	tRNA wobble uridine modification
AF_1595	GO:0005524	ATP binding
AF_1595	GO:0046872	metal ion binding
AF_1595	GO:0016740	transferase activity
AF_1595	GO:0000049	tRNA binding
AF_1595	GO:0034227	tRNA thio-modification
AF_1595	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1599	GO:0004834	tryptophan synthase activity
AF_1600	GO:0004834	tryptophan synthase activity
AF_1601	GO:0000162	tryptophan biosynthetic process
AF_1601	GO:0004640	phosphoribosylanthranilate isomerase activity
AF_1602	GO:0004049	anthranilate synthase activity
AF_1602	GO:0000287	magnesium ion binding
AF_1602	GO:0006541	glutamine metabolic process
AF_1602	GO:0000162	tryptophan biosynthetic process
AF_1602	GO:0004048	anthranilate phosphoribosyltransferase activity
AF_1603	GO:0000162	tryptophan biosynthetic process
AF_1603	GO:0046872	metal ion binding
AF_1603	GO:0004049	anthranilate synthase activity
AF_1604	GO:0004048	anthranilate phosphoribosyltransferase activity
AF_1604	GO:0000162	tryptophan biosynthetic process
AF_1604	GO:0000287	magnesium ion binding
AF_1606	GO:0016021	integral component of membrane
AF_1606	GO:0005886	plasma membrane
AF_1606	GO:0055085	transmembrane transport
AF_1607	GO:0015847	putrescine transport
AF_1607	GO:0055085	transmembrane transport
AF_1607	GO:0005886	plasma membrane
AF_1607	GO:0005887	integral component of plasma membrane
AF_1607	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_1608	GO:0005524	ATP binding
AF_1608	GO:0015595	ATPase-coupled spermidine transmembrane transporter activity
AF_1608	GO:0015594	ATPase-coupled putrescine transmembrane transporter activity
AF_1608	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_1608	GO:0016887	ATPase activity
AF_1610	GO:0006557	S-adenosylmethioninamine biosynthetic process
AF_1610	GO:0004014	adenosylmethionine decarboxylase activity
AF_1610	GO:0008295	spermidine biosynthetic process
AF_1611	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
AF_1611	GO:0005737	cytoplasm
AF_1611	GO:0006596	polyamine biosynthetic process
AF_1612	GO:0090549	response to carbon starvation
AF_1612	GO:0015812	gamma-aminobutyric acid transport
AF_1612	GO:0006974	cellular response to DNA damage stimulus
AF_1612	GO:0016021	integral component of membrane
AF_1612	GO:0005886	plasma membrane
AF_1612	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity
AF_1612	GO:0015291	secondary active transmembrane transporter activity
AF_1612	GO:0009450	gamma-aminobutyric acid catabolic process
AF_1612	GO:0006995	cellular response to nitrogen starvation
AF_1615	GO:1904047	S-adenosyl-L-methionine binding
AF_1615	GO:0019008	molybdopterin synthase complex
AF_1615	GO:0061798	GTP 3',8'-cyclase activity
AF_1615	GO:0005525	GTP binding
AF_1615	GO:0046872	metal ion binding
AF_1615	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_1615	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1618	GO:0016021	integral component of membrane
AF_1618	GO:0005886	plasma membrane
AF_1619	GO:0016021	integral component of membrane
AF_1619	GO:0005886	plasma membrane
AF_1621	GO:0005886	plasma membrane
AF_1621	GO:0016021	integral component of membrane
AF_1622	GO:0043565	sequence-specific DNA binding
AF_1623	GO:0030170	pyridoxal phosphate binding
AF_1623	GO:0008483	transaminase activity
AF_1623	GO:0008652	cellular amino acid biosynthetic process
AF_1623	GO:0005737	cytoplasm
AF_1624	GO:0005829	cytosol
AF_1624	GO:0000166	nucleotide binding
AF_1624	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_1630	GO:0006527	arginine catabolic process
AF_1630	GO:0008792	arginine decarboxylase activity
AF_1638	GO:0019253	reductive pentose-phosphate cycle
AF_1638	GO:0016984	ribulose-bisphosphate carboxylase activity
AF_1638	GO:0004497	monooxygenase activity
AF_1638	GO:0000287	magnesium ion binding
AF_1639	GO:0016021	integral component of membrane
AF_1639	GO:0005886	plasma membrane
AF_1639	GO:0006355	regulation of transcription, DNA-templated
AF_1639	GO:0000155	phosphorelay sensor kinase activity
AF_1639	GO:0005524	ATP binding
AF_1640	GO:0005506	iron ion binding
AF_1640	GO:0016692	NADH peroxidase activity
AF_1641	GO:0006631	fatty acid metabolic process
AF_1641	GO:0004300	enoyl-CoA hydratase activity
AF_1642	GO:0005524	ATP binding
AF_1642	GO:0006427	histidyl-tRNA aminoacylation
AF_1642	GO:0005737	cytoplasm
AF_1642	GO:0004821	histidine-tRNA ligase activity
AF_1643	GO:0016831	carboxy-lyase activity
AF_1643	GO:0008694	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AF_1643	GO:0005829	cytosol
AF_1643	GO:0005737	cytoplasm
AF_1643	GO:0006744	ubiquinone biosynthetic process
AF_1645	GO:0010181	FMN binding
AF_1645	GO:0046872	metal ion binding
AF_1645	GO:0004632	phosphopantothenate--cysteine ligase activity
AF_1645	GO:0004633	phosphopantothenoylcysteine decarboxylase activity
AF_1645	GO:0015941	pantothenate catabolic process
AF_1645	GO:0015937	coenzyme A biosynthetic process
AF_1652	GO:0004252	serine-type endopeptidase activity
AF_1652	GO:0046872	metal ion binding
AF_1652	GO:0005576	extracellular region
AF_1653	GO:0004252	serine-type endopeptidase activity
AF_1653	GO:0005576	extracellular region
AF_1653	GO:0046872	metal ion binding
AF_1664	GO:0071897	DNA biosynthetic process
AF_1664	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
AF_1664	GO:0031419	cobalamin binding
AF_1664	GO:0006260	DNA replication
AF_1664	GO:0005524	ATP binding
AF_1665	GO:0016491	oxidoreductase activity
AF_1669	GO:0019420	dissimilatory sulfate reduction
AF_1669	GO:0046982	protein heterodimerization activity
AF_1669	GO:0005737	cytoplasm
AF_1669	GO:0046872	metal ion binding
AF_1669	GO:0051290	protein heterotetramerization
AF_1669	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1670	GO:0051290	protein heterotetramerization
AF_1670	GO:0019420	dissimilatory sulfate reduction
AF_1670	GO:0046982	protein heterodimerization activity
AF_1670	GO:0071949	FAD binding
AF_1670	GO:0009973	adenylyl-sulfate reductase activity
AF_1670	GO:0005737	cytoplasm
AF_1671	GO:0005524	ATP binding
AF_1671	GO:0047475	phenylacetate-CoA ligase activity
AF_1671	GO:0010124	phenylacetate catabolic process
AF_1674	GO:0005737	cytoplasm
AF_1674	GO:0003856	3-dehydroquinate synthase activity
AF_1674	GO:0050492	glycerol-1-phosphate dehydrogenase [NAD(P)+] activity
AF_1674	GO:0046872	metal ion binding
AF_1674	GO:0008654	phospholipid biosynthetic process
AF_1676	GO:0061698	protein deglutarylation
AF_1676	GO:0036049	peptidyl-lysine desuccinylation
AF_1676	GO:0036047	peptidyl-lysine demalonylation
AF_1676	GO:0008270	zinc ion binding
AF_1676	GO:0070403	NAD+ binding
AF_1676	GO:0005737	cytoplasm
AF_1676	GO:0034979	NAD-dependent protein deacetylase activity
AF_1676	GO:0061697	protein-glutaryllysine deglutarylase activity
AF_1676	GO:0016740	transferase activity
AF_1676	GO:0036054	protein-malonyllysine demalonylase activity
AF_1676	GO:0036055	protein-succinyllysine desuccinylase activity
AF_1677	GO:0009982	pseudouridine synthase activity
AF_1677	GO:0106029	tRNA pseudouridine synthase activity
AF_1677	GO:0031119	tRNA pseudouridine synthesis
AF_1677	GO:0003723	RNA binding
AF_1677	GO:0001522	pseudouridine synthesis
AF_1685	GO:0003924	GTPase activity
AF_1685	GO:0005524	ATP binding
AF_1685	GO:0016020	membrane
AF_1685	GO:0018414	nickel incorporation into metallo-sulfur cluster
AF_1692	GO:0006296	nucleotide-excision repair, DNA incision, 5'-to lesion
AF_1692	GO:0006285	base-excision repair, AP site formation
AF_1692	GO:0000703	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
AF_1692	GO:0046872	metal ion binding
AF_1692	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity
AF_1692	GO:0003677	DNA binding
AF_1692	GO:0140078	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AF_1692	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1693	GO:0004641	phosphoribosylformylglycinamidine cyclo-ligase activity
AF_1693	GO:0006189	'de novo' IMP biosynthetic process
AF_1693	GO:0005737	cytoplasm
AF_1693	GO:0005524	ATP binding
AF_1695	GO:0050661	NADP binding
AF_1695	GO:0008677	2-dehydropantoate 2-reductase activity
AF_1695	GO:0005737	cytoplasm
AF_1695	GO:0015940	pantothenate biosynthetic process
AF_1701	GO:0016625	oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
AF_1701	GO:0033611	oxalate catabolic process
AF_1702	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1702	GO:0046872	metal ion binding
AF_1702	GO:0016625	oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
AF_1702	GO:0030976	thiamine pyrophosphate binding
AF_1702	GO:0033611	oxalate catabolic process
AF_1704	GO:0009234	menaquinone biosynthetic process
AF_1704	GO:0016830	carbon-carbon lyase activity
AF_1706	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
AF_1708	GO:0005524	ATP binding
AF_1708	GO:0003677	DNA binding
AF_1708	GO:0009035	type I site-specific deoxyribonuclease activity
AF_1708	GO:0009307	DNA restriction-modification system
AF_1710	GO:0009307	DNA restriction-modification system
AF_1710	GO:0003677	DNA binding
AF_1716	GO:0080030	methyl indole-3-acetate esterase activity
AF_1719	GO:1990610	acetolactate synthase regulator activity
AF_1719	GO:0005829	cytosol
AF_1719	GO:0009099	valine biosynthetic process
AF_1719	GO:0009097	isoleucine biosynthetic process
AF_1719	GO:0003984	acetolactate synthase activity
AF_1720	GO:0005948	acetolactate synthase complex
AF_1720	GO:0003984	acetolactate synthase activity
AF_1720	GO:0050660	flavin adenine dinucleotide binding
AF_1720	GO:0000287	magnesium ion binding
AF_1720	GO:0030976	thiamine pyrophosphate binding
AF_1720	GO:0009097	isoleucine biosynthetic process
AF_1720	GO:0009099	valine biosynthetic process
AF_1721	GO:0005524	ATP binding
AF_1721	GO:0004721	phosphoprotein phosphatase activity
AF_1721	GO:0000155	phosphorelay sensor kinase activity
AF_1721	GO:0009405	pathogenesis
AF_1721	GO:0016021	integral component of membrane
AF_1721	GO:0005886	plasma membrane
AF_1726	GO:0006303	double-strand break repair via nonhomologous end joining
AF_1726	GO:0003690	double-stranded DNA binding
AF_1726	GO:0006310	DNA recombination
AF_1727	GO:0051287	NAD binding
AF_1727	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity
AF_1727	GO:0046872	metal ion binding
AF_1727	GO:0008948	oxaloacetate decarboxylase activity
AF_1728	GO:0102710	D-inositol-3-phosphate glycosyltransferase activity
AF_1728	GO:0000287	magnesium ion binding
AF_1728	GO:0010125	mycothiol biosynthetic process
AF_1728	GO:0008375	acetylglucosaminyltransferase activity
AF_1730	GO:0031119	tRNA pseudouridine synthesis
AF_1730	GO:0106029	tRNA pseudouridine synthase activity
AF_1730	GO:0003723	RNA binding
AF_1732	GO:0006006	glucose metabolic process
AF_1732	GO:0050661	NADP binding
AF_1732	GO:0005737	cytoplasm
AF_1732	GO:0006096	glycolytic process
AF_1732	GO:0051287	NAD binding
AF_1732	GO:0004365	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AF_1732	GO:0016020	membrane
AF_1732	GO:0034394	protein localization to cell surface
AF_1732	GO:0031639	plasminogen activation
AF_1736	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity
AF_1736	GO:0042282	hydroxymethylglutaryl-CoA reductase activity
AF_1736	GO:0015936	coenzyme A metabolic process
AF_1737	GO:0005975	carbohydrate metabolic process
AF_1741	GO:0009116	nucleoside metabolic process
AF_1741	GO:0000287	magnesium ion binding
AF_1741	GO:0004588	orotate phosphoribosyltransferase activity
AF_1741	GO:0044205	'de novo' UMP biosynthetic process
AF_1743	GO:0003700	DNA-binding transcription factor activity
AF_1743	GO:0003677	DNA binding
AF_1744	GO:0008654	phospholipid biosynthetic process
AF_1744	GO:0016780	phosphotransferase activity, for other substituted phosphate groups
AF_1744	GO:0016020	membrane
AF_1746	GO:0016021	integral component of membrane
AF_1746	GO:0008519	ammonium transmembrane transporter activity
AF_1746	GO:0005886	plasma membrane
AF_1747	GO:0006808	regulation of nitrogen utilization
AF_1747	GO:0030234	enzyme regulator activity
AF_1747	GO:0005524	ATP binding
AF_1747	GO:0005829	cytosol
AF_1748	GO:0004416	hydroxyacylglutathione hydrolase activity
AF_1748	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
AF_1748	GO:0046872	metal ion binding
AF_1749	GO:0005887	integral component of plasma membrane
AF_1749	GO:0008519	ammonium transmembrane transporter activity
AF_1749	GO:0019740	nitrogen utilization
AF_1750	GO:0006808	regulation of nitrogen utilization
AF_1750	GO:0000166	nucleotide binding
AF_1750	GO:0030234	enzyme regulator activity
AF_1751	GO:0046872	metal ion binding
AF_1751	GO:0006096	glycolytic process
AF_1751	GO:0046537	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
AF_1752	GO:0019563	glycerol catabolic process
AF_1752	GO:0004370	glycerol kinase activity
AF_1752	GO:0005524	ATP binding
AF_1752	GO:0006072	glycerol-3-phosphate metabolic process
AF_1752	GO:0006071	glycerol metabolic process
AF_1755	GO:0005886	plasma membrane
AF_1755	GO:0015562	efflux transmembrane transporter activity
AF_1755	GO:1903785	L-valine transmembrane transport
AF_1755	GO:0005887	integral component of plasma membrane
AF_1755	GO:0005304	L-valine transmembrane transporter activity
AF_1761	GO:0003861	3-isopropylmalate dehydratase activity
AF_1761	GO:0009098	leucine biosynthetic process
AF_1764	GO:0008270	zinc ion binding
AF_1764	GO:0016787	hydrolase activity
AF_1765	GO:0005829	cytosol
AF_1765	GO:0016888	endodeoxyribonuclease activity, producing 5'-phosphomonoesters
AF_1765	GO:0046872	metal ion binding
AF_1767	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_1767	GO:0030288	outer membrane-bounded periplasmic space
AF_1767	GO:1904680	peptide transmembrane transporter activity
AF_1767	GO:0015833	peptide transport
AF_1767	GO:0015031	protein transport
AF_1768	GO:0015031	protein transport
AF_1768	GO:0005886	plasma membrane
AF_1768	GO:0016021	integral component of membrane
AF_1768	GO:0055085	transmembrane transport
AF_1770	GO:0015031	protein transport
AF_1770	GO:0030420	establishment of competence for transformation
AF_1770	GO:0022857	transmembrane transporter activity
AF_1770	GO:0055085	transmembrane transport
AF_1770	GO:0016887	ATPase activity
AF_1770	GO:0005524	ATP binding
AF_1770	GO:0005886	plasma membrane
AF_1770	GO:0030435	sporulation resulting in formation of a cellular spore
AF_1771	GO:0005524	ATP binding
AF_1771	GO:0005886	plasma membrane
AF_1771	GO:0015031	protein transport
AF_1771	GO:0016887	ATPase activity
AF_1772	GO:0005524	ATP binding
AF_1772	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_1772	GO:0102391	decanoate-CoA ligase activity
AF_1773	GO:0005886	plasma membrane
AF_1773	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1773	GO:0046872	metal ion binding
AF_1773	GO:0016491	oxidoreductase activity
AF_1773	GO:0016021	integral component of membrane
AF_1774	GO:0009268	response to pH
AF_1774	GO:1990169	stress response to copper ion
AF_1774	GO:0016021	integral component of membrane
AF_1774	GO:0005886	plasma membrane
AF_1774	GO:0022857	transmembrane transporter activity
AF_1774	GO:0006865	amino acid transport
AF_1777	GO:0005737	cytoplasm
AF_1777	GO:0046872	metal ion binding
AF_1778	GO:0030435	sporulation resulting in formation of a cellular spore
AF_1778	GO:0000917	division septum assembly
AF_1779	GO:0005829	cytosol
AF_1779	GO:0008873	gluconate 2-dehydrogenase activity
AF_1779	GO:0030267	glyoxylate reductase (NADP+) activity
AF_1779	GO:0016618	hydroxypyruvate reductase activity
AF_1779	GO:0051287	NAD binding
AF_1779	GO:0019521	D-gluconate metabolic process
AF_1780	GO:0009099	valine biosynthetic process
AF_1780	GO:0050660	flavin adenine dinucleotide binding
AF_1780	GO:0009097	isoleucine biosynthetic process
AF_1780	GO:0030976	thiamine pyrophosphate binding
AF_1780	GO:0000287	magnesium ion binding
AF_1780	GO:0003984	acetolactate synthase activity
AF_1783	GO:0003723	RNA binding
AF_1783	GO:0052908	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AF_1783	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity
AF_1783	GO:0005737	cytoplasm
AF_1787	GO:0008360	regulation of cell shape
AF_1787	GO:0003677	DNA binding
AF_1787	GO:0005886	plasma membrane
AF_1787	GO:0016021	integral component of membrane
AF_1788	GO:0006166	purine ribonucleoside salvage
AF_1788	GO:0017061	S-methyl-5-thioadenosine phosphorylase activity
AF_1788	GO:0019509	L-methionine salvage from methylthioadenosine
AF_1795	GO:0004177	aminopeptidase activity
AF_1795	GO:0046872	metal ion binding
AF_1795	GO:0008237	metallopeptidase activity
AF_1796	GO:0019647	formaldehyde assimilation via ribulose monophosphate cycle
AF_1796	GO:1901135	carbohydrate derivative metabolic process
AF_1796	GO:0043800	hexulose-6-phosphate isomerase activity
AF_1796	GO:0097367	carbohydrate derivative binding
AF_1796	GO:0005975	carbohydrate metabolic process
AF_1797	GO:0030643	cellular phosphate ion homeostasis
AF_1797	GO:0045936	negative regulation of phosphate metabolic process
AF_1797	GO:2000186	negative regulation of phosphate transmembrane transport
AF_1797	GO:0050922	negative regulation of chemotaxis
AF_1797	GO:0060326	cell chemotaxis
AF_1797	GO:0042803	protein homodimerization activity
AF_1797	GO:0005737	cytoplasm
AF_1797	GO:0050928	negative regulation of positive chemotaxis
AF_1797	GO:0006817	phosphate ion transport
AF_1798	GO:0006817	phosphate ion transport
AF_1798	GO:0016021	integral component of membrane
AF_1798	GO:0005886	plasma membrane
AF_1798	GO:0005315	inorganic phosphate transmembrane transporter activity
AF_1801	GO:0002128	tRNA nucleoside ribose methylation
AF_1801	GO:0005829	cytosol
AF_1801	GO:0003723	RNA binding
AF_1801	GO:0052666	tRNA (cytosine-2'-O-)-methyltransferase activity
AF_1801	GO:0052665	tRNA (uracil-2'-O-)-methyltransferase activity
AF_1806	GO:0006265	DNA topological change
AF_1806	GO:0046872	metal ion binding
AF_1806	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity
AF_1806	GO:0003677	DNA binding
AF_1806	GO:0005694	chromosome
AF_1810	GO:0046872	metal ion binding
AF_1810	GO:1904047	S-adenosyl-L-methionine binding
AF_1810	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_1810	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1810	GO:0005525	GTP binding
AF_1810	GO:0019008	molybdopterin synthase complex
AF_1810	GO:0061798	GTP 3',8'-cyclase activity
AF_1811	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity
AF_1811	GO:0003937	IMP cyclohydrolase activity
AF_1811	GO:0006189	'de novo' IMP biosynthetic process
AF_1813	GO:0005886	plasma membrane
AF_1813	GO:0030163	protein catabolic process
AF_1813	GO:0008270	zinc ion binding
AF_1813	GO:0004222	metalloendopeptidase activity
AF_1813	GO:0004176	ATP-dependent peptidase activity
AF_1813	GO:0005524	ATP binding
AF_1813	GO:0016021	integral component of membrane
AF_1815	GO:0009447	putrescine catabolic process
AF_1815	GO:0030170	pyridoxal phosphate binding
AF_1815	GO:0033094	butane-1,4-diamine:2-oxoglutarate aminotransferase activity
AF_1815	GO:0019477	L-lysine catabolic process
AF_1815	GO:0019161	diamine transaminase activity
AF_1817	GO:0003677	DNA binding
AF_1819	GO:0055085	transmembrane transport
AF_1819	GO:0022857	transmembrane transporter activity
AF_1819	GO:0016887	ATPase activity
AF_1819	GO:0005524	ATP binding
AF_1819	GO:0005886	plasma membrane
AF_1825	GO:0008137	NADH dehydrogenase (ubiquinone) activity
AF_1825	GO:0048038	quinone binding
AF_1825	GO:0042773	ATP synthesis coupled electron transport
AF_1825	GO:0016021	integral component of membrane
AF_1825	GO:0005886	plasma membrane
AF_1826	GO:0016021	integral component of membrane
AF_1826	GO:0005886	plasma membrane
AF_1826	GO:0008137	NADH dehydrogenase (ubiquinone) activity
AF_1826	GO:0048038	quinone binding
AF_1826	GO:0042773	ATP synthesis coupled electron transport
AF_1827	GO:0008137	NADH dehydrogenase (ubiquinone) activity
AF_1827	GO:0016021	integral component of membrane
AF_1827	GO:0048038	quinone binding
AF_1827	GO:0005886	plasma membrane
AF_1827	GO:0042773	ATP synthesis coupled electron transport
AF_1829	GO:0005506	iron ion binding
AF_1829	GO:0005886	plasma membrane
AF_1829	GO:0048038	quinone binding
AF_1829	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1829	GO:0008137	NADH dehydrogenase (ubiquinone) activity
AF_1830	GO:0050136	NADH dehydrogenase (quinone) activity
AF_1830	GO:0048038	quinone binding
AF_1830	GO:0051287	NAD binding
AF_1830	GO:0005886	plasma membrane
AF_1831	GO:0016021	integral component of membrane
AF_1831	GO:0005886	plasma membrane
AF_1831	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
AF_1831	GO:0048038	quinone binding
AF_1838	GO:0009435	NAD biosynthetic process
AF_1838	GO:0016639	oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
AF_1838	GO:0050661	NADP binding
AF_1838	GO:0051287	NAD binding
AF_1838	GO:0033735	aspartate dehydrogenase activity
AF_1839	GO:0034213	quinolinate catabolic process
AF_1839	GO:0009435	NAD biosynthetic process
AF_1839	GO:0005737	cytoplasm
AF_1839	GO:0004514	nicotinate-nucleotide diphosphorylase (carboxylating) activity
AF_1840	GO:0046872	metal ion binding
AF_1840	GO:0070006	metalloaminopeptidase activity
AF_1840	GO:0070084	protein initiator methionine removal
AF_1841	GO:0005886	plasma membrane
AF_1841	GO:0005524	ATP binding
AF_1841	GO:0016887	ATPase activity
AF_1843	GO:0016021	integral component of membrane
AF_1843	GO:0005886	plasma membrane
AF_1843	GO:0015675	nickel cation transport
AF_1849	GO:0018492	carbon-monoxide dehydrogenase (acceptor) activity
AF_1849	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1849	GO:0005737	cytoplasm
AF_1849	GO:0005886	plasma membrane
AF_1849	GO:0016151	nickel cation binding
AF_1849	GO:0006091	generation of precursor metabolites and energy
AF_1849	GO:0043885	carbon-monoxide dehydrogenase (ferredoxin) activity
AF_1854	GO:0003986	acetyl-CoA hydrolase activity
AF_1854	GO:0006083	acetate metabolic process
AF_1854	GO:0006084	acetyl-CoA metabolic process
AF_1854	GO:0046358	butyrate biosynthetic process
AF_1854	GO:0008775	acetate CoA-transferase activity
AF_1854	GO:0019679	propionate metabolic process, methylcitrate cycle
AF_1855	GO:0005886	plasma membrane
AF_1855	GO:0031956	medium-chain fatty acid-CoA ligase activity
AF_1855	GO:0005524	ATP binding
AF_1855	GO:0006635	fatty acid beta-oxidation
AF_1858	GO:0045454	cell redox homeostasis
AF_1858	GO:0008137	NADH dehydrogenase (ubiquinone) activity
AF_1858	GO:0050660	flavin adenine dinucleotide binding
AF_1876	GO:0043571	maintenance of CRISPR repeat elements
AF_1876	GO:0004521	endoribonuclease activity
AF_1876	GO:0051607	defense response to virus
AF_1876	GO:0046872	metal ion binding
AF_1877	GO:0051607	defense response to virus
AF_1877	GO:0046872	metal ion binding
AF_1877	GO:0051536	iron-sulfur cluster binding
AF_1877	GO:0004527	exonuclease activity
AF_1878	GO:0051607	defense response to virus
AF_1878	GO:0046872	metal ion binding
AF_1878	GO:0004520	endodeoxyribonuclease activity
AF_1878	GO:0003677	DNA binding
AF_1878	GO:0043571	maintenance of CRISPR repeat elements
AF_1883	GO:0015772	oligosaccharide transport
AF_1883	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_1883	GO:0022857	transmembrane transporter activity
AF_1883	GO:0009877	nodulation
AF_1884	GO:0016887	ATPase activity
AF_1884	GO:0005524	ATP binding
AF_1886	GO:0003677	DNA binding
AF_1886	GO:0006351	transcription, DNA-templated
AF_1886	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
AF_1886	GO:0032549	ribonucleoside binding
AF_1887	GO:0003677	DNA binding
AF_1887	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
AF_1887	GO:0032549	ribonucleoside binding
AF_1887	GO:0006351	transcription, DNA-templated
AF_1888	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
AF_1888	GO:0000287	magnesium ion binding
AF_1888	GO:0003677	DNA binding
AF_1888	GO:0006351	transcription, DNA-templated
AF_1888	GO:0008270	zinc ion binding
AF_1890	GO:0005840	ribosome
AF_1891	GO:0003700	DNA-binding transcription factor activity
AF_1891	GO:0031564	transcription antitermination
AF_1891	GO:0006353	DNA-templated transcription, termination
AF_1891	GO:0003723	RNA binding
AF_1891	GO:0005829	cytosol
AF_1893	GO:0015935	small ribosomal subunit
AF_1893	GO:0019843	rRNA binding
AF_1893	GO:0003735	structural constituent of ribosome
AF_1893	GO:0000049	tRNA binding
AF_1893	GO:0006412	translation
AF_1894	GO:0003746	translation elongation factor activity
AF_1894	GO:0005525	GTP binding
AF_1894	GO:0005737	cytoplasm
AF_1894	GO:0003924	GTPase activity
AF_1896	GO:0050660	flavin adenine dinucleotide binding
AF_1896	GO:0010181	FMN binding
AF_1896	GO:0051287	NAD binding
AF_1896	GO:0003955	NAD(P)H dehydrogenase (quinone) activity
AF_1896	GO:0050661	NADP binding
AF_1898	GO:0006935	chemotaxis
AF_1898	GO:0000160	phosphorelay signal transduction system
AF_1898	GO:0046872	metal ion binding
AF_1898	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility
AF_1898	GO:0005737	cytoplasm
AF_1899	GO:0008270	zinc ion binding
AF_1899	GO:0003896	DNA primase activity
AF_1899	GO:1990077	primosome complex
AF_1899	GO:0003677	DNA binding
AF_1900	GO:0005524	ATP binding
AF_1900	GO:0006220	pyrimidine nucleotide metabolic process
AF_1900	GO:0004127	cytidylate kinase activity
AF_1900	GO:0005737	cytoplasm
AF_1902	GO:0031522	cell envelope Sec protein transport complex
AF_1902	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
AF_1902	GO:0005887	integral component of plasma membrane
AF_1902	GO:0005886	plasma membrane
AF_1902	GO:0008320	protein transmembrane transporter activity
AF_1902	GO:0005048	signal sequence binding
AF_1902	GO:0043952	protein transport by the Sec complex
AF_1903	GO:0015934	large ribosomal subunit
AF_1903	GO:0019843	rRNA binding
AF_1903	GO:0003735	structural constituent of ribosome
AF_1903	GO:0006412	translation
AF_1905	GO:0003735	structural constituent of ribosome
AF_1905	GO:0015935	small ribosomal subunit
AF_1905	GO:0019843	rRNA binding
AF_1905	GO:0006412	translation
AF_1906	GO:0022625	cytosolic large ribosomal subunit
AF_1906	GO:0006412	translation
AF_1906	GO:0003735	structural constituent of ribosome
AF_1906	GO:0008097	5S rRNA binding
AF_1909	GO:0005840	ribosome
AF_1909	GO:0006412	translation
AF_1909	GO:0003735	structural constituent of ribosome
AF_1909	GO:0019843	rRNA binding
AF_1910	GO:0019843	rRNA binding
AF_1910	GO:0003735	structural constituent of ribosome
AF_1910	GO:0006412	translation
AF_1910	GO:0005840	ribosome
AF_1912	GO:0000049	tRNA binding
AF_1912	GO:0003735	structural constituent of ribosome
AF_1912	GO:0005840	ribosome
AF_1912	GO:0006412	translation
AF_1912	GO:0019843	rRNA binding
AF_1914	GO:0006412	translation
AF_1914	GO:0019843	rRNA binding
AF_1914	GO:0005840	ribosome
AF_1914	GO:0003735	structural constituent of ribosome
AF_1915	GO:0003735	structural constituent of ribosome
AF_1915	GO:0019843	rRNA binding
AF_1915	GO:0015934	large ribosomal subunit
AF_1915	GO:0006412	translation
AF_1916	GO:0005840	ribosome
AF_1916	GO:0019843	rRNA binding
AF_1916	GO:0006412	translation
AF_1916	GO:0003735	structural constituent of ribosome
AF_1918	GO:0006412	translation
AF_1918	GO:0005840	ribosome
AF_1918	GO:0003735	structural constituent of ribosome
AF_1919	GO:0019843	rRNA binding
AF_1919	GO:0003729	mRNA binding
AF_1919	GO:0005840	ribosome
AF_1919	GO:0006412	translation
AF_1919	GO:0003735	structural constituent of ribosome
AF_1920	GO:0003735	structural constituent of ribosome
AF_1920	GO:0019843	rRNA binding
AF_1920	GO:0015934	large ribosomal subunit
AF_1920	GO:0006412	translation
AF_1921	GO:0015935	small ribosomal subunit
AF_1921	GO:0006412	translation
AF_1921	GO:0003735	structural constituent of ribosome
AF_1921	GO:0019843	rRNA binding
AF_1922	GO:0015934	large ribosomal subunit
AF_1922	GO:0019843	rRNA binding
AF_1922	GO:0006412	translation
AF_1922	GO:0016740	transferase activity
AF_1922	GO:0003735	structural constituent of ribosome
AF_1923	GO:0003735	structural constituent of ribosome
AF_1923	GO:0019843	rRNA binding
AF_1923	GO:0005840	ribosome
AF_1923	GO:0006412	translation
AF_1924	GO:0005840	ribosome
AF_1924	GO:0019843	rRNA binding
AF_1924	GO:0003735	structural constituent of ribosome
AF_1924	GO:0006412	translation
AF_1925	GO:0005840	ribosome
AF_1925	GO:0019843	rRNA binding
AF_1925	GO:0003735	structural constituent of ribosome
AF_1925	GO:0006412	translation
AF_1930	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
AF_1930	GO:0005737	cytoplasm
AF_1930	GO:0046872	metal ion binding
AF_1930	GO:0046294	formaldehyde catabolic process
AF_1930	GO:0006730	one-carbon metabolic process
AF_1932	GO:0005524	ATP binding
AF_1932	GO:0006635	fatty acid beta-oxidation
AF_1932	GO:0102391	decanoate-CoA ligase activity
AF_1932	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_1935	GO:0005737	cytoplasm
AF_1935	GO:0046294	formaldehyde catabolic process
AF_1935	GO:0006730	one-carbon metabolic process
AF_1935	GO:0018759	methenyltetrahydromethanopterin cyclohydrolase activity
AF_1938	GO:0005524	ATP binding
AF_1938	GO:0008080	N-acetyltransferase activity
AF_1938	GO:0046872	metal ion binding
AF_1940	GO:0005737	cytoplasm
AF_1940	GO:0006189	'de novo' IMP biosynthetic process
AF_1940	GO:0004642	phosphoribosylformylglycinamidine synthase activity
AF_1940	GO:0005524	ATP binding
AF_1940	GO:0000287	magnesium ion binding
AF_1941	GO:0005737	cytoplasm
AF_1941	GO:0006189	'de novo' IMP biosynthetic process
AF_1941	GO:0004642	phosphoribosylformylglycinamidine synthase activity
AF_1941	GO:0005524	ATP binding
AF_1950	GO:0005737	cytoplasm
AF_1950	GO:0005524	ATP binding
AF_1950	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity
AF_1950	GO:0004636	phosphoribosyl-ATP diphosphatase activity
AF_1950	GO:0000105	histidine biosynthetic process
AF_1951	GO:0016021	integral component of membrane
AF_1951	GO:0046872	metal ion binding
AF_1951	GO:0004518	nuclease activity
AF_1954	GO:0005524	ATP binding
AF_1954	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
AF_1954	GO:0016787	hydrolase activity
AF_1954	GO:0006412	translation
AF_1954	GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex
AF_1955	GO:0000049	tRNA binding
AF_1955	GO:0005737	cytoplasm
AF_1955	GO:0006432	phenylalanyl-tRNA aminoacylation
AF_1955	GO:0000287	magnesium ion binding
AF_1955	GO:0004826	phenylalanine-tRNA ligase activity
AF_1955	GO:0005524	ATP binding
AF_1957	GO:0046872	metal ion binding
AF_1957	GO:0006551	leucine metabolic process
AF_1957	GO:0016836	hydro-lyase activity
AF_1957	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1958	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1958	GO:0016836	hydro-lyase activity
AF_1958	GO:0046872	metal ion binding
AF_1958	GO:0006551	leucine metabolic process
AF_1959	GO:0019552	glutamate catabolic process via 2-hydroxyglutarate
AF_1959	GO:0046872	metal ion binding
AF_1959	GO:0016787	hydrolase activity
AF_1959	GO:0005524	ATP binding
AF_1959	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1960	GO:0005829	cytosol
AF_1960	GO:0004385	guanylate kinase activity
AF_1960	GO:0005524	ATP binding
AF_1963	GO:0009098	leucine biosynthetic process
AF_1963	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1963	GO:0046872	metal ion binding
AF_1963	GO:0003861	3-isopropylmalate dehydratase activity
AF_1968	GO:0003677	DNA binding
AF_1968	GO:0042732	D-xylose metabolic process
AF_1973	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1973	GO:0046872	metal ion binding
AF_1973	GO:0070041	rRNA (uridine-C5-)-methyltransferase activity
AF_1973	GO:0070475	rRNA base methylation
AF_1974	GO:0006782	protoporphyrinogen IX biosynthetic process
AF_1974	GO:0006783	heme biosynthetic process
AF_1974	GO:0008270	zinc ion binding
AF_1974	GO:0004655	porphobilinogen synthase activity
AF_1974	GO:0005829	cytosol
AF_1975	GO:0008883	glutamyl-tRNA reductase activity
AF_1975	GO:0050661	NADP binding
AF_1975	GO:0006782	protoporphyrinogen IX biosynthetic process
AF_1976	GO:0030163	protein catabolic process
AF_1976	GO:0006508	proteolysis
AF_1976	GO:0016021	integral component of membrane
AF_1976	GO:0005886	plasma membrane
AF_1976	GO:0005524	ATP binding
AF_1976	GO:0004176	ATP-dependent peptidase activity
AF_1976	GO:0004222	metalloendopeptidase activity
AF_1976	GO:0008270	zinc ion binding
AF_1980	GO:0015886	heme transport
AF_1980	GO:0017004	cytochrome complex assembly
AF_1980	GO:0015232	heme transmembrane transporter activity
AF_1980	GO:0020037	heme binding
AF_1980	GO:0005886	plasma membrane
AF_1980	GO:0016021	integral component of membrane
AF_1981	GO:0042626	ATPase-coupled transmembrane transporter activity
AF_1981	GO:0006829	zinc ion transport
AF_1981	GO:0005887	integral component of plasma membrane
AF_1981	GO:0043190	ATP-binding cassette (ABC) transporter complex
AF_1982	GO:0005524	ATP binding
AF_1982	GO:0016887	ATPase activity
AF_1982	GO:0006829	zinc ion transport
AF_1983	GO:0042597	periplasmic space
AF_1983	GO:0046872	metal ion binding
AF_1983	GO:0030001	metal ion transport
AF_1985	GO:0000287	magnesium ion binding
AF_1985	GO:0050661	NADP binding
AF_1985	GO:0004455	ketol-acid reductoisomerase activity
AF_1985	GO:0009099	valine biosynthetic process
AF_1985	GO:0009097	isoleucine biosynthetic process
AF_1989	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
AF_1989	GO:0046872	metal ion binding
AF_1989	GO:0005737	cytoplasm
AF_1989	GO:0042026	protein refolding
AF_1995	GO:0016021	integral component of membrane
AF_1995	GO:0035725	sodium ion transmembrane transport
AF_1995	GO:0015293	symporter activity
AF_1995	GO:0005886	plasma membrane
AF_1998	GO:0016491	oxidoreductase activity
AF_1998	GO:0046872	metal ion binding
AF_1998	GO:0051539	4 iron, 4 sulfur cluster binding
AF_1998	GO:0016021	integral component of membrane
AF_1998	GO:0005886	plasma membrane
AF_2000	GO:0006730	one-carbon metabolic process
AF_2000	GO:0033353	S-adenosylmethionine cycle
AF_2000	GO:0004013	adenosylhomocysteinase activity
AF_2000	GO:0005829	cytosol
AF_2002	GO:0030170	pyridoxal phosphate binding
AF_2002	GO:0004400	histidinol-phosphate transaminase activity
AF_2002	GO:0000105	histidine biosynthetic process
AF_2004	GO:0019752	carboxylic acid metabolic process
AF_2004	GO:0004398	histidine decarboxylase activity
AF_2004	GO:0030170	pyridoxal phosphate binding
AF_2005	GO:0005737	cytoplasm
AF_2005	GO:0005525	GTP binding
AF_2005	GO:0046872	metal ion binding
AF_2005	GO:0061603	molybdenum cofactor guanylyltransferase activity
AF_2005	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_2006	GO:1904047	S-adenosyl-L-methionine binding
AF_2006	GO:0019008	molybdopterin synthase complex
AF_2006	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2006	GO:0061798	GTP 3',8'-cyclase activity
AF_2006	GO:0005525	GTP binding
AF_2006	GO:0046872	metal ion binding
AF_2006	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_2007	GO:0046872	metal ion binding
AF_2007	GO:0009231	riboflavin biosynthetic process
AF_2007	GO:0050661	NADP binding
AF_2007	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity
AF_2007	GO:0008835	diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
AF_2009	GO:0005506	iron ion binding
AF_2009	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2009	GO:0009975	cyclase activity
AF_2009	GO:0018189	pyrroloquinoline quinone biosynthetic process
AF_2009	GO:1904047	S-adenosyl-L-methionine binding
AF_2009	GO:0016491	oxidoreductase activity
AF_2013	GO:0047475	phenylacetate-CoA ligase activity
AF_2013	GO:0010124	phenylacetate catabolic process
AF_2013	GO:0005524	ATP binding
AF_2014	GO:0008643	carbohydrate transport
AF_2014	GO:0015538	sialic acid:proton symporter activity
AF_2014	GO:0005887	integral component of plasma membrane
AF_2015	GO:0003984	acetolactate synthase activity
AF_2015	GO:0050660	flavin adenine dinucleotide binding
AF_2015	GO:0030976	thiamine pyrophosphate binding
AF_2015	GO:0009099	valine biosynthetic process
AF_2015	GO:0009097	isoleucine biosynthetic process
AF_2015	GO:0005948	acetolactate synthase complex
AF_2015	GO:0000287	magnesium ion binding
AF_2017	GO:0036125	fatty acid beta-oxidation multienzyme complex
AF_2017	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_2017	GO:0008692	3-hydroxybutyryl-CoA epimerase activity
AF_2017	GO:0004165	dodecenoyl-CoA delta-isomerase activity
AF_2017	GO:0004300	enoyl-CoA hydratase activity
AF_2017	GO:0006635	fatty acid beta-oxidation
AF_2019	GO:0050060	long-chain-alcohol dehydrogenase activity
AF_2019	GO:0008888	glycerol dehydrogenase [NAD+] activity
AF_2019	GO:0046872	metal ion binding
AF_2032	GO:0005524	ATP binding
AF_2032	GO:0000155	phosphorelay sensor kinase activity
AF_2032	GO:0006355	regulation of transcription, DNA-templated
AF_2032	GO:0030435	sporulation resulting in formation of a cellular spore
AF_2033	GO:0005524	ATP binding
AF_2033	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_2033	GO:0046872	metal ion binding
AF_2033	GO:0102391	decanoate-CoA ligase activity
AF_2034	GO:0008233	peptidase activity
AF_2034	GO:0008237	metallopeptidase activity
AF_2034	GO:0046872	metal ion binding
AF_2034	GO:0005829	cytosol
AF_2034	GO:0004177	aminopeptidase activity
AF_2035	GO:0016260	selenocysteine biosynthetic process
AF_2035	GO:0005737	cytoplasm
AF_2035	GO:0005524	ATP binding
AF_2035	GO:0004828	serine-tRNA ligase activity
AF_2035	GO:0006434	seryl-tRNA aminoacylation
AF_2035	GO:0097056	selenocysteinyl-tRNA(Sec) biosynthetic process
AF_2036	GO:0008495	protoheme IX farnesyltransferase activity
AF_2036	GO:0005886	plasma membrane
AF_2036	GO:0016021	integral component of membrane
AF_2036	GO:0048034	heme O biosynthetic process
AF_2037	GO:0046523	S-methyl-5-thioribose-1-phosphate isomerase activity
AF_2037	GO:0019284	L-methionine salvage from S-adenosylmethionine
AF_2037	GO:0019509	L-methionine salvage from methylthioadenosine
AF_2039	GO:0005737	cytoplasm
AF_2039	GO:0003723	RNA binding
AF_2039	GO:0016434	rRNA (cytosine) methyltransferase activity
AF_2042	GO:0033862	UMP kinase activity
AF_2042	GO:0005524	ATP binding
AF_2042	GO:0005737	cytoplasm
AF_2042	GO:0044210	'de novo' CTP biosynthetic process
AF_2044	GO:0003882	CDP-diacylglycerol-serine O-phosphatidyltransferase activity
AF_2044	GO:0008654	phospholipid biosynthetic process
AF_2044	GO:0005886	plasma membrane
AF_2044	GO:0016021	integral component of membrane
AF_2045	GO:0006646	phosphatidylethanolamine biosynthetic process
AF_2045	GO:0004609	phosphatidylserine decarboxylase activity
AF_2045	GO:0005886	plasma membrane
AF_2047	GO:0005737	cytoplasm
AF_2047	GO:0004799	thymidylate synthase activity
AF_2047	GO:0006231	dTMP biosynthetic process
AF_2047	GO:0006235	dTTP biosynthetic process
AF_2047	GO:0032259	methylation
AF_2051	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity
AF_2051	GO:0005737	cytoplasm
AF_2052	GO:0033611	oxalate catabolic process
AF_2052	GO:0046872	metal ion binding
AF_2052	GO:0016625	oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
AF_2052	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2052	GO:0030976	thiamine pyrophosphate binding
AF_2053	GO:0006979	response to oxidative stress
AF_2053	GO:0019164	pyruvate synthase activity
AF_2054	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2054	GO:0046872	metal ion binding
AF_2054	GO:0016625	oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
AF_2056	GO:0043953	protein transport by the Tat complex
AF_2056	GO:0008320	protein transmembrane transporter activity
AF_2056	GO:0033281	TAT protein transport complex
AF_2056	GO:0005887	integral component of plasma membrane
AF_2057	GO:0003995	acyl-CoA dehydrogenase activity
AF_2057	GO:0050660	flavin adenine dinucleotide binding
AF_2057	GO:0006635	fatty acid beta-oxidation
AF_2060	GO:0005737	cytoplasm
AF_2060	GO:0016887	ATPase activity
AF_2060	GO:0005524	ATP binding
AF_2062	GO:0031226	intrinsic component of plasma membrane
AF_2062	GO:0005737	cytoplasm
AF_2062	GO:0005525	GTP binding
AF_2062	GO:0003924	GTPase activity
AF_2062	GO:0005047	signal recognition particle binding
AF_2062	GO:0006605	protein targeting
AF_2062	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
AF_2062	GO:0005886	plasma membrane
AF_2062	GO:0016020	membrane
AF_2071	GO:0003942	N-acetyl-gamma-glutamyl-phosphate reductase activity
AF_2071	GO:0051287	NAD binding
AF_2071	GO:0046983	protein dimerization activity
AF_2071	GO:0006526	arginine biosynthetic process
AF_2071	GO:0005737	cytoplasm
AF_2073	GO:0006730	one-carbon metabolic process
AF_2073	GO:0005737	cytoplasm
AF_2073	GO:0030270	formylmethanofuran-tetrahydromethanopterin N-formyltransferase activity
AF_2073	GO:0046294	formaldehyde catabolic process
AF_2074	GO:0009228	thiamine biosynthetic process
AF_2074	GO:0004789	thiamine-phosphate diphosphorylase activity
AF_2074	GO:0000287	magnesium ion binding
AF_2074	GO:0009229	thiamine diphosphate biosynthetic process
AF_2075	GO:0009229	thiamine diphosphate biosynthetic process
AF_2075	GO:0009228	thiamine biosynthetic process
AF_2075	GO:0000287	magnesium ion binding
AF_2075	GO:0004417	hydroxyethylthiazole kinase activity
AF_2075	GO:0005524	ATP binding
AF_2084	GO:0015451	decarboxylation-driven active transmembrane transporter activity
AF_2084	GO:0005886	plasma membrane
AF_2084	GO:0018801	glutaconyl-CoA decarboxylase activity
AF_2084	GO:0006814	sodium ion transport
AF_2084	GO:0016021	integral component of membrane
AF_2084	GO:0019552	glutamate catabolic process via 2-hydroxyglutarate
AF_2085	GO:0005524	ATP binding
AF_2085	GO:0034029	2-oxoglutarate carboxylase activity
AF_2085	GO:0046872	metal ion binding
AF_2089	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
AF_2089	GO:0005524	ATP binding
AF_2089	GO:0016114	terpenoid biosynthetic process
AF_2089	GO:0050515	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
AF_2098	GO:0004222	metalloendopeptidase activity
AF_2098	GO:0008270	zinc ion binding
AF_2098	GO:0004176	ATP-dependent peptidase activity
AF_2098	GO:0005524	ATP binding
AF_2098	GO:0005886	plasma membrane
AF_2098	GO:0016021	integral component of membrane
AF_2098	GO:0030163	protein catabolic process
AF_2099	GO:0016052	carbohydrate catabolic process
AF_2099	GO:0009063	cellular amino acid catabolic process
AF_2099	GO:1903663	L-altrarate catabolic process
AF_2099	GO:1990594	L-altrarate dehydratase activity
AF_2099	GO:0016836	hydro-lyase activity
AF_2099	GO:0008867	galactarate dehydratase activity
AF_2099	GO:0046392	galactarate catabolic process
AF_2099	GO:0000287	magnesium ion binding
AF_2100	GO:0000287	magnesium ion binding
AF_2100	GO:0050660	flavin adenine dinucleotide binding
AF_2100	GO:0009097	isoleucine biosynthetic process
AF_2100	GO:0003984	acetolactate synthase activity
AF_2100	GO:0009099	valine biosynthetic process
AF_2100	GO:0030976	thiamine pyrophosphate binding
AF_2101	GO:0005737	cytoplasm
AF_2101	GO:0019518	L-threonine catabolic process to glycine
AF_2101	GO:0008743	L-threonine 3-dehydrogenase activity
AF_2101	GO:0008270	zinc ion binding
AF_2109	GO:0006355	regulation of transcription, DNA-templated
AF_2109	GO:0000155	phosphorelay sensor kinase activity
AF_2109	GO:0005524	ATP binding
AF_2109	GO:0005886	plasma membrane
AF_2109	GO:0016021	integral component of membrane
AF_2111	GO:0016021	integral component of membrane
AF_2111	GO:0005886	plasma membrane
AF_2116	GO:0006412	translation
AF_2116	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
AF_2116	GO:0005524	ATP binding
AF_2116	GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation
AF_2118	GO:0005737	cytoplasm
AF_2118	GO:0004122	cystathionine beta-synthase activity
AF_2118	GO:0019343	cysteine biosynthetic process via cystathionine
AF_2127	GO:0003677	DNA binding
AF_2127	GO:0003700	DNA-binding transcription factor activity
AF_2127	GO:0070689	L-threonine catabolic process to propionate
AF_2128	GO:0009349	riboflavin synthase complex
AF_2128	GO:0000906	6,7-dimethyl-8-ribityllumazine synthase activity
AF_2128	GO:0009231	riboflavin biosynthetic process
AF_2129	GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity
AF_2129	GO:0030170	pyridoxal phosphate binding
AF_2129	GO:0009058	biosynthetic process
AF_2129	GO:0005737	cytoplasm
AF_2136	GO:0005737	cytoplasm
AF_2136	GO:0006355	regulation of transcription, DNA-templated
AF_2136	GO:0000976	transcription regulatory region sequence-specific DNA binding
AF_2136	GO:0003700	DNA-binding transcription factor activity
AF_2137	GO:0008324	cation transmembrane transporter activity
AF_2137	GO:0016021	integral component of membrane
AF_2137	GO:0016020	membrane
AF_2137	GO:0005886	plasma membrane
AF_2138	GO:0016311	dephosphorylation
AF_2138	GO:0004647	phosphoserine phosphatase activity
AF_2138	GO:0016791	phosphatase activity
AF_2138	GO:0005737	cytoplasm
AF_2138	GO:0006564	L-serine biosynthetic process
AF_2138	GO:0000287	magnesium ion binding
AF_2144	GO:0015035	protein disulfide oxidoreductase activity
AF_2144	GO:0006662	glycerol ether metabolic process
AF_2144	GO:0045454	cell redox homeostasis
AF_2146	GO:0005525	GTP binding
AF_2146	GO:0003924	GTPase activity
AF_2146	GO:0042254	ribosome biogenesis
AF_2146	GO:0005737	cytoplasm
AF_2146	GO:0000287	magnesium ion binding
AF_2148	GO:0046872	metal ion binding
AF_2148	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
AF_2148	GO:0004416	hydroxyacylglutathione hydrolase activity
AF_2150	GO:0061799	cyclic pyranopterin monophosphate synthase activity
AF_2150	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_2151	GO:0019740	nitrogen utilization
AF_2151	GO:0006212	uracil catabolic process
AF_2151	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
AF_2153	GO:0016787	hydrolase activity
AF_2155	GO:0004519	endonuclease activity
AF_2155	GO:0006364	rRNA processing
AF_2155	GO:0005737	cytoplasm
AF_2155	GO:0046872	metal ion binding
AF_2155	GO:0003723	RNA binding
AF_2157	GO:0005829	cytosol
AF_2157	GO:0034237	protein kinase A regulatory subunit binding
AF_2157	GO:0008664	2'-5'-RNA ligase activity
AF_2157	GO:0004113	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
AF_2157	GO:0010738	regulation of protein kinase A signaling
AF_2173	GO:0055114	oxidation-reduction process
AF_2173	GO:0016491	oxidoreductase activity
AF_2173	GO:0018580	nitronate monooxygenase activity
AF_2173	GO:0000166	nucleotide binding
AF_2178	GO:0005737	cytoplasm
AF_2178	GO:0052915	23S rRNA (guanine(2445)-N(2))-methyltransferase activity
AF_2178	GO:0070043	rRNA (guanine-N7-)-methyltransferase activity
AF_2178	GO:0003723	RNA binding
AF_2179	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_2179	GO:0030366	molybdopterin synthase activity
AF_2179	GO:0005829	cytosol
AF_2184	GO:0019843	rRNA binding
AF_2184	GO:0003735	structural constituent of ribosome
AF_2184	GO:0015935	small ribosomal subunit
AF_2184	GO:0006412	translation
AF_2185	GO:0004776	succinate-CoA ligase (GDP-forming) activity
AF_2185	GO:0000166	nucleotide binding
AF_2185	GO:0004775	succinate-CoA ligase (ADP-forming) activity
AF_2185	GO:0009361	succinate-CoA ligase complex (ADP-forming)
AF_2185	GO:0005829	cytosol
AF_2185	GO:0006099	tricarboxylic acid cycle
AF_2186	GO:0005524	ATP binding
AF_2186	GO:0000287	magnesium ion binding
AF_2186	GO:0004775	succinate-CoA ligase (ADP-forming) activity
AF_2186	GO:0006099	tricarboxylic acid cycle
AF_2192	GO:0016021	integral component of membrane
AF_2192	GO:0018378	cytochrome c-heme linkage via heme-L-cysteine
AF_2192	GO:0015232	heme transmembrane transporter activity
AF_2192	GO:0020037	heme binding
AF_2192	GO:0005886	plasma membrane
AF_2194	GO:0008276	protein methyltransferase activity
AF_2194	GO:0005737	cytoplasm
AF_2195	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine
AF_2195	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
AF_2196	GO:0016829	lyase activity
AF_2199	GO:0003861	3-isopropylmalate dehydratase activity
AF_2199	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2199	GO:0009098	leucine biosynthetic process
AF_2199	GO:0046872	metal ion binding
AF_2200	GO:0046872	metal ion binding
AF_2200	GO:0016817	hydrolase activity, acting on acid anhydrides
AF_2207	GO:0030270	formylmethanofuran-tetrahydromethanopterin N-formyltransferase activity
AF_2207	GO:0005737	cytoplasm
AF_2207	GO:0046294	formaldehyde catabolic process
AF_2207	GO:0006730	one-carbon metabolic process
AF_2207	GO:0015947	methane metabolic process
AF_2208	GO:0008902	hydroxymethylpyrimidine kinase activity
AF_2208	GO:0005524	ATP binding
AF_2208	GO:0000287	magnesium ion binding
AF_2208	GO:0004789	thiamine-phosphate diphosphorylase activity
AF_2208	GO:0008972	phosphomethylpyrimidine kinase activity
AF_2208	GO:0009228	thiamine biosynthetic process
AF_2208	GO:0009229	thiamine diphosphate biosynthetic process
AF_2211	GO:0005524	ATP binding
AF_2211	GO:0003877	ATP adenylyltransferase activity
AF_2216	GO:0046872	metal ion binding
AF_2216	GO:0005524	ATP binding
AF_2216	GO:0034029	2-oxoglutarate carboxylase activity
AF_2217	GO:0003989	acetyl-CoA carboxylase activity
AF_2217	GO:0047154	methylmalonyl-CoA carboxytransferase activity
AF_2217	GO:0006633	fatty acid biosynthetic process
AF_2217	GO:0009317	acetyl-CoA carboxylase complex
AF_2218	GO:0004493	methylmalonyl-CoA epimerase activity
AF_2218	GO:0046872	metal ion binding
AF_2218	GO:0046491	L-methylmalonyl-CoA metabolic process
AF_2218	GO:0004462	lactoylglutathione lyase activity
AF_2224	GO:0006438	valyl-tRNA aminoacylation
AF_2224	GO:0004832	valine-tRNA ligase activity
AF_2224	GO:0005524	ATP binding
AF_2224	GO:0005737	cytoplasm
AF_2224	GO:0002161	aminoacyl-tRNA editing activity
AF_2225	GO:0046872	metal ion binding
AF_2225	GO:0003824	catalytic activity
AF_2226	GO:0009229	thiamine diphosphate biosynthetic process
AF_2226	GO:0004810	tRNA adenylyltransferase activity
AF_2226	GO:0016783	sulfurtransferase activity
AF_2226	GO:0005524	ATP binding
AF_2226	GO:0000049	tRNA binding
AF_2226	GO:0009228	thiamine biosynthetic process
AF_2226	GO:0034227	tRNA thio-modification
AF_2226	GO:0052837	thiazole biosynthetic process
AF_2226	GO:0005737	cytoplasm
AF_2228	GO:0005737	cytoplasm
AF_2228	GO:0016740	transferase activity
AF_2228	GO:0008033	tRNA processing
AF_2229	GO:0006541	glutamine metabolic process
AF_2229	GO:0009236	cobalamin biosynthetic process
AF_2229	GO:0042242	cobyrinic acid a,c-diamide synthase activity
AF_2229	GO:0005524	ATP binding
AF_2232	GO:0005737	cytoplasm
AF_2232	GO:0003700	DNA-binding transcription factor activity
AF_2232	GO:0003677	DNA binding
AF_2232	GO:0046872	metal ion binding
AF_2233	GO:0020037	heme binding
AF_2233	GO:0006979	response to oxidative stress
AF_2233	GO:0042744	hydrogen peroxide catabolic process
AF_2233	GO:0046872	metal ion binding
AF_2233	GO:0004096	catalase activity
AF_2237	GO:0009146	purine nucleoside triphosphate catabolic process
AF_2237	GO:0000166	nucleotide binding
AF_2237	GO:0035870	dITP diphosphatase activity
AF_2237	GO:0046872	metal ion binding
AF_2237	GO:0017111	nucleoside-triphosphatase activity
AF_2237	GO:0047429	nucleoside-triphosphate diphosphatase activity
AF_2237	GO:0005737	cytoplasm
AF_2237	GO:0005829	cytosol
AF_2237	GO:0036222	XTP diphosphatase activity
AF_2237	GO:0009143	nucleoside triphosphate catabolic process
AF_2237	GO:0009117	nucleotide metabolic process
AF_2242	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
AF_2242	GO:0044208	'de novo' AMP biosynthetic process
AF_2242	GO:0006189	'de novo' IMP biosynthetic process
AF_2242	GO:0070626	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity
AF_2242	GO:0005829	cytosol
AF_2243	GO:0006635	fatty acid beta-oxidation
AF_2243	GO:0003988	acetyl-CoA C-acyltransferase activity
AF_2243	GO:0005737	cytoplasm
AF_2244	GO:0003995	acyl-CoA dehydrogenase activity
AF_2244	GO:0004085	butyryl-CoA dehydrogenase activity
AF_2244	GO:0050660	flavin adenine dinucleotide binding
AF_2244	GO:0019605	butyrate metabolic process
AF_2249	GO:0046872	metal ion binding
AF_2249	GO:0005737	cytoplasm
AF_2249	GO:0000160	phosphorelay signal transduction system
AF_2249	GO:0006935	chemotaxis
AF_2249	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility
AF_2250	GO:0044205	'de novo' UMP biosynthetic process
AF_2250	GO:0004151	dihydroorotase activity
AF_2250	GO:0008270	zinc ion binding
AF_2252	GO:0006526	arginine biosynthetic process
AF_2252	GO:0005524	ATP binding
AF_2252	GO:0004055	argininosuccinate synthase activity
AF_2252	GO:0005737	cytoplasm
AF_2253	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_2253	GO:0005525	GTP binding
AF_2254	GO:0005524	ATP binding
AF_2254	GO:0005829	cytosol
AF_2254	GO:0010501	RNA secondary structure unwinding
AF_2254	GO:0006401	RNA catabolic process
AF_2254	GO:0000027	ribosomal large subunit assembly
AF_2254	GO:0033592	RNA strand annealing activity
AF_2254	GO:0003724	RNA helicase activity
AF_2254	GO:0003723	RNA binding
AF_2255	GO:0004813	alanine-tRNA ligase activity
AF_2255	GO:0005737	cytoplasm
AF_2255	GO:0005524	ATP binding
AF_2255	GO:0000049	tRNA binding
AF_2255	GO:0006419	alanyl-tRNA aminoacylation
AF_2255	GO:0008270	zinc ion binding
AF_2256	GO:0043773	coenzyme F420-0 gamma-glutamyl ligase activity
AF_2256	GO:0052618	coenzyme F420-0:L-glutamate ligase activity
AF_2256	GO:0052619	coenzyme F420-1:gamma-L-glutamate ligase activity
AF_2256	GO:0005525	GTP binding
AF_2256	GO:0016491	oxidoreductase activity
AF_2256	GO:0046872	metal ion binding
AF_2257	GO:0008716	D-alanine-D-alanine ligase activity
AF_2257	GO:0005737	cytoplasm
AF_2257	GO:0071555	cell wall organization
AF_2257	GO:0046872	metal ion binding
AF_2257	GO:0008360	regulation of cell shape
AF_2257	GO:0005524	ATP binding
AF_2257	GO:0009252	peptidoglycan biosynthetic process
AF_2258	GO:0016021	integral component of membrane
AF_2258	GO:0005886	plasma membrane
AF_2258	GO:0022857	transmembrane transporter activity
AF_2258	GO:0016020	membrane
AF_2264	GO:0016289	CoA hydrolase activity
AF_2265	GO:0016829	lyase activity
AF_2265	GO:0000105	histidine biosynthetic process
AF_2265	GO:0000107	imidazoleglycerol-phosphate synthase activity
AF_2265	GO:0004359	glutaminase activity
AF_2265	GO:0005737	cytoplasm
AF_2265	GO:0006541	glutamine metabolic process
AF_2266	GO:0004416	hydroxyacylglutathione hydrolase activity
AF_2266	GO:0046872	metal ion binding
AF_2266	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
AF_2267	GO:0046677	response to antibiotic
AF_2267	GO:0016491	oxidoreductase activity
AF_2269	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2269	GO:0016887	ATPase activity
AF_2269	GO:0046872	metal ion binding
AF_2269	GO:0016226	iron-sulfur cluster assembly
AF_2269	GO:0005524	ATP binding
AF_2273	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
AF_2273	GO:0019605	butyrate metabolic process
AF_2273	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity
AF_2273	GO:0070403	NAD+ binding
AF_2275	GO:0050660	flavin adenine dinucleotide binding
AF_2275	GO:0003995	acyl-CoA dehydrogenase activity
AF_2275	GO:0019439	aromatic compound catabolic process
AF_2277	GO:0004844	uracil DNA N-glycosylase activity
AF_2277	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2277	GO:0046872	metal ion binding
AF_2277	GO:0006281	DNA repair
AF_2281	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2281	GO:0046872	metal ion binding
AF_2281	GO:0043546	molybdopterin cofactor binding
AF_2281	GO:0016625	oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
AF_2281	GO:0051536	iron-sulfur cluster binding
AF_2281	GO:0009055	electron transfer activity
AF_2283	GO:0006412	translation
AF_2283	GO:0019843	rRNA binding
AF_2283	GO:0003735	structural constituent of ribosome
AF_2283	GO:0005840	ribosome
AF_2284	GO:0006412	translation
AF_2284	GO:0045903	positive regulation of translational fidelity
AF_2284	GO:0003735	structural constituent of ribosome
AF_2284	GO:0019843	rRNA binding
AF_2284	GO:0015935	small ribosomal subunit
AF_2285	GO:0003735	structural constituent of ribosome
AF_2285	GO:0019843	rRNA binding
AF_2285	GO:0005840	ribosome
AF_2285	GO:0006412	translation
AF_2285	GO:0000049	tRNA binding
AF_2286	GO:0046872	metal ion binding
AF_2286	GO:0006744	ubiquinone biosynthetic process
AF_2286	GO:0004659	prenyltransferase activity
AF_2286	GO:0042802	identical protein binding
AF_2286	GO:0008299	isoprenoid biosynthetic process
AF_2286	GO:0016094	polyprenol biosynthetic process
AF_2286	GO:0005829	cytosol
AF_2288	GO:0005524	ATP binding
AF_2288	GO:0003991	acetylglutamate kinase activity
AF_2288	GO:0005737	cytoplasm
AF_2288	GO:0042450	arginine biosynthetic process via ornithine
AF_2289	GO:0005737	cytoplasm
AF_2289	GO:0005524	ATP binding
AF_2289	GO:0000287	magnesium ion binding
AF_2289	GO:0004335	galactokinase activity
AF_2289	GO:0006012	galactose metabolic process
AF_2290	GO:0016787	hydrolase activity
AF_2295	GO:0019289	rhizobactin 1021 biosynthetic process
AF_2295	GO:0030170	pyridoxal phosphate binding
AF_2295	GO:0033983	diaminobutyrate decarboxylase activity
AF_2299	GO:0016021	integral component of membrane
AF_2299	GO:0046872	metal ion binding
AF_2299	GO:0016779	nucleotidyltransferase activity
AF_2299	GO:0016780	phosphotransferase activity, for other substituted phosphate groups
AF_2299	GO:0008654	phospholipid biosynthetic process
AF_2300	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine
AF_2300	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
AF_2301	GO:0006527	arginine catabolic process
AF_2301	GO:0008792	arginine decarboxylase activity
AF_2303	GO:0046872	metal ion binding
AF_2303	GO:0006464	cellular protein modification process
AF_2303	GO:0005524	ATP binding
AF_2303	GO:0016881	acid-amino acid ligase activity
AF_2303	GO:0006412	translation
AF_2313	GO:0004300	enoyl-CoA hydratase activity
AF_2313	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
AF_2313	GO:0010124	phenylacetate catabolic process
AF_2313	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
AF_2313	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
AF_2313	GO:0016803	ether hydrolase activity
AF_2314	GO:0005737	cytoplasm
AF_2314	GO:0003908	methylated-DNA-[protein]-cysteine S-methyltransferase activity
AF_2314	GO:0032259	methylation
AF_2314	GO:0006307	DNA dealkylation involved in DNA repair
AF_2315	GO:0000309	nicotinamide-nucleotide adenylyltransferase activity
AF_2315	GO:0042802	identical protein binding
AF_2315	GO:0016787	hydrolase activity
AF_2315	GO:0005524	ATP binding
AF_2315	GO:0009435	NAD biosynthetic process
AF_2315	GO:0005737	cytoplasm
AF_2316	GO:0005525	GTP binding
AF_2316	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2316	GO:0061798	GTP 3',8'-cyclase activity
AF_2316	GO:0046872	metal ion binding
AF_2316	GO:1904047	S-adenosyl-L-methionine binding
AF_2316	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
AF_2316	GO:0019008	molybdopterin synthase complex
AF_2322	GO:0030091	protein repair
AF_2322	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
AF_2322	GO:0005737	cytoplasm
AF_2323	GO:0051073	adenosylcobinamide-GDP ribazoletransferase activity
AF_2323	GO:0009236	cobalamin biosynthetic process
AF_2323	GO:0008818	cobalamin 5'-phosphate synthase activity
AF_2323	GO:0005886	plasma membrane
AF_2323	GO:0016021	integral component of membrane
AF_2324	GO:0006355	regulation of transcription, DNA-templated
AF_2324	GO:0003723	RNA binding
AF_2324	GO:0016434	rRNA (cytosine) methyltransferase activity
AF_2324	GO:0005737	cytoplasm
AF_2327	GO:0050661	NADP binding
AF_2327	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity
AF_2327	GO:0009073	aromatic amino acid family biosynthetic process
AF_2327	GO:0019632	shikimate metabolic process
AF_2327	GO:0009423	chorismate biosynthetic process
AF_2328	GO:0006412	translation
AF_2328	GO:0005524	ATP binding
AF_2328	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
AF_2328	GO:0006450	regulation of translational fidelity
AF_2329	GO:0006412	translation
AF_2329	GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex
AF_2329	GO:0005524	ATP binding
AF_2329	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
AF_2329	GO:0016787	hydrolase activity
AF_2334	GO:0008295	spermidine biosynthetic process
AF_2334	GO:0004766	spermidine synthase activity
AF_2334	GO:0005737	cytoplasm
AF_2336	GO:0004742	dihydrolipoyllysine-residue acetyltransferase activity
AF_2336	GO:0045150	acetoin catabolic process
AF_2350	GO:0004386	helicase activity
AF_2350	GO:0005524	ATP binding
AF_2363	GO:0000287	magnesium ion binding
AF_2363	GO:0005524	ATP binding
AF_2363	GO:0004642	phosphoribosylformylglycinamidine synthase activity
AF_2363	GO:0006189	'de novo' IMP biosynthetic process
AF_2363	GO:0005737	cytoplasm
AF_2364	GO:0016887	ATPase activity
AF_2364	GO:0005524	ATP binding
AF_2364	GO:0005886	plasma membrane
AF_2365	GO:0016226	iron-sulfur cluster assembly
AF_2366	GO:0030170	pyridoxal phosphate binding
AF_2366	GO:0005737	cytoplasm
AF_2366	GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity
AF_2366	GO:0009058	biosynthetic process
AF_2367	GO:0033816	diaminobutyrate acetyltransferase activity
AF_2367	GO:0019491	ectoine biosynthetic process
AF_2367	GO:0008080	N-acetyltransferase activity
AF_2368	GO:0005524	ATP binding
AF_2368	GO:0102391	decanoate-CoA ligase activity
AF_2368	GO:0004467	long-chain fatty acid-CoA ligase activity
AF_2372	GO:0004401	histidinol-phosphatase activity
AF_2372	GO:0042578	phosphoric ester hydrolase activity
AF_2372	GO:0046855	inositol phosphate dephosphorylation
AF_2372	GO:0000105	histidine biosynthetic process
AF_2372	GO:0016791	phosphatase activity
AF_2372	GO:0046872	metal ion binding
AF_2373	GO:0003951	NAD+ kinase activity
AF_2373	GO:0006741	NADP biosynthetic process
AF_2373	GO:0019674	NAD metabolic process
AF_2373	GO:0005737	cytoplasm
AF_2373	GO:0005524	ATP binding
AF_2373	GO:0046872	metal ion binding
AF_2380	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2380	GO:0005524	ATP binding
AF_2380	GO:0016887	ATPase activity
AF_2380	GO:0046872	metal ion binding
AF_2380	GO:0016226	iron-sulfur cluster assembly
AF_2382	GO:0016887	ATPase activity
AF_2382	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2382	GO:0005524	ATP binding
AF_2382	GO:0016226	iron-sulfur cluster assembly
AF_2382	GO:0046872	metal ion binding
AF_2384	GO:0042597	periplasmic space
AF_2384	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2384	GO:0030151	molybdenum ion binding
AF_2384	GO:0008940	nitrate reductase activity
AF_2384	GO:0043546	molybdopterin cofactor binding
AF_2385	GO:0042597	periplasmic space
AF_2385	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2385	GO:0055114	oxidation-reduction process
AF_2385	GO:0046872	metal ion binding
AF_2385	GO:0005886	plasma membrane
AF_2388	GO:0008324	cation transmembrane transporter activity
AF_2388	GO:0016021	integral component of membrane
AF_2388	GO:0016020	membrane
AF_2388	GO:0005886	plasma membrane
AF_2389-C	GO:0016208	AMP binding
AF_2389-C	GO:0003987	acetate-CoA ligase activity
AF_2389-C	GO:0005524	ATP binding
AF_2389-C	GO:0046872	metal ion binding
AF_2389-C	GO:0019427	acetyl-CoA biosynthetic process from acetate
AF_2394	GO:0005886	plasma membrane
AF_2394	GO:0015093	ferrous iron transmembrane transporter activity
AF_2394	GO:0016021	integral component of membrane
AF_2394	GO:0005525	GTP binding
AF_2394	GO:0055072	iron ion homeostasis
AF_2395	GO:0030026	cellular manganese ion homeostasis
AF_2395	GO:0003677	DNA binding
AF_2395	GO:0005737	cytoplasm
AF_2395	GO:0046983	protein dimerization activity
AF_2395	GO:0003700	DNA-binding transcription factor activity
AF_2395	GO:0030145	manganese ion binding
AF_2399	GO:0003723	RNA binding
AF_2399	GO:0008173	RNA methyltransferase activity
AF_2399	GO:0006396	RNA processing
AF_2406	GO:0003676	nucleic acid binding
AF_2406	GO:0043138	3'-5' DNA helicase activity
AF_2406	GO:0005524	ATP binding
AF_2406	GO:0006289	nucleotide-excision repair
AF_2407	GO:0016787	hydrolase activity
AF_2407	GO:0046872	metal ion binding
AF_2409	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2409	GO:0005737	cytoplasm
AF_2409	GO:0046872	metal ion binding
AF_2409	GO:0008033	tRNA processing
AF_2409	GO:0008616	queuosine biosynthetic process
AF_2409	GO:0052693	epoxyqueuosine reductase activity
AF_2411	GO:0006629	lipid metabolic process
AF_2411	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
AF_2412	GO:0009229	thiamine diphosphate biosynthetic process
AF_2412	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2412	GO:0016830	carbon-carbon lyase activity
AF_2412	GO:0008270	zinc ion binding
AF_2412	GO:0009228	thiamine biosynthetic process
AF_2413	GO:0009975	cyclase activity
AF_2413	GO:0018189	pyrroloquinoline quinone biosynthetic process
AF_2413	GO:0005506	iron ion binding
AF_2413	GO:0016491	oxidoreductase activity
AF_2413	GO:1904047	S-adenosyl-L-methionine binding
AF_2413	GO:0051539	4 iron, 4 sulfur cluster binding
AF_2415	GO:0006633	fatty acid biosynthetic process
AF_2415	GO:0033818	beta-ketoacyl-acyl-carrier-protein synthase III activity
AF_2415	GO:0005737	cytoplasm
AF_2415	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity
AF_2419	GO:0003677	DNA binding
AF_2419	GO:0005737	cytoplasm
AF_2419	GO:0000160	phosphorelay signal transduction system
AF_2420	GO:0006355	regulation of transcription, DNA-templated
AF_2420	GO:0000155	phosphorelay sensor kinase activity
AF_2420	GO:0005524	ATP binding
AF_2420	GO:0030435	sporulation resulting in formation of a cellular spore
AF_2421	GO:0002161	aminoacyl-tRNA editing activity
AF_2421	GO:0005737	cytoplasm
AF_2421	GO:0005524	ATP binding
AF_2421	GO:0004823	leucine-tRNA ligase activity
AF_2421	GO:0006429	leucyl-tRNA aminoacylation
AF_2425	GO:0016887	ATPase activity
AF_2425	GO:0005524	ATP binding
AF_2429	GO:0004300	enoyl-CoA hydratase activity
AF_2429	GO:0006635	fatty acid beta-oxidation
AF_2431	GO:0006527	arginine catabolic process
AF_2431	GO:0008792	arginine decarboxylase activity
AF_2434	GO:0004521	endoribonuclease activity
AF_2434	GO:0043571	maintenance of CRISPR repeat elements
AF_2434	GO:0051607	defense response to virus
AF_2434	GO:0046872	metal ion binding
AF_2435	GO:0046872	metal ion binding
AF_2435	GO:0004520	endodeoxyribonuclease activity
AF_2435	GO:0003677	DNA binding
AF_2435	GO:0051607	defense response to virus
AF_2435	GO:0043571	maintenance of CRISPR repeat elements