locus-tag class description AF_0004 IPR003439 ABC transporter-like AF_0004 IPR017871 ABC transporter, conserved site AF_0004 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0004 IPR003593 AAA+ ATPase domain AF_0006 IPR012741 Methyltransferase cognate corrinoid protein AF_0006 IPR036594 Methionine synthase domain AF_0006 IPR036724 Cobalamin-binding domain superfamily AF_0006 IPR006158 Cobalamin (vitamin B12)-binding domain AF_0006 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AF_0009 IPR023467 Tetrahydromethanopterin S-methyltransferase, subunit H/Methyltransferase Mtx, subunit H AF_0009 IPR011005 Dihydropteroate synthase-like AF_0011 IPR036594 Methionine synthase domain AF_0011 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AF_0011 IPR012741 Methyltransferase cognate corrinoid protein AF_0011 IPR036724 Cobalamin-binding domain superfamily AF_0011 IPR006158 Cobalamin (vitamin B12)-binding domain AF_0017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_0017 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_0017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_0017 IPR036291 NAD(P)-binding domain superfamily AF_0017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_0017 IPR022694 3-hydroxyacyl-CoA dehydrogenase AF_0017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_0018 IPR020610 Thiolase, active site AF_0018 IPR012793 Beta-ketoadipyl CoA thiolase AF_0018 IPR002155 Thiolase AF_0018 IPR016039 Thiolase-like AF_0018 IPR020616 Thiolase, N-terminal AF_0018 IPR020613 Thiolase, conserved site AF_0018 IPR020617 Thiolase, C-terminal AF_0018 IPR020615 Thiolase, acyl-enzyme intermediate active site AF_0020 IPR003673 CoA-transferase family III AF_0020 IPR023606 CoA-transferase family III domain superfamily AF_0021 IPR000014 PAS domain AF_0021 IPR035965 PAS domain superfamily AF_0021 IPR005467 Histidine kinase domain AF_0021 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_0021 IPR003594 Histidine kinase/HSP90-like ATPase AF_0021 IPR033463 Single cache domain 3 AF_0021 IPR029151 Periplasmic sensor-like domain superfamily AF_0021 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_0021 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AF_0021 IPR013767 PAS fold AF_0021 IPR039506 SpoOB, alpha-helical domain AF_0023 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal AF_0023 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily AF_0023 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal AF_0023 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal AF_0023 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 AF_0023 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 AF_0024 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AF_0024 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AF_0024 IPR039697 Iron-type alcohol dehydrogenase-like AF_0027 IPR014845 Protein GYD/TTHA1554 AF_0033 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AF_0033 IPR016039 Thiolase-like AF_0033 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AF_0033 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AF_0034 IPR002155 Thiolase AF_0034 IPR012793 Beta-ketoadipyl CoA thiolase AF_0034 IPR016039 Thiolase-like AF_0034 IPR020610 Thiolase, active site AF_0034 IPR020615 Thiolase, acyl-enzyme intermediate active site AF_0034 IPR020617 Thiolase, C-terminal AF_0034 IPR020613 Thiolase, conserved site AF_0034 IPR020616 Thiolase, N-terminal AF_0035 IPR014710 RmlC-like jelly roll fold AF_0035 IPR016305 Mannose-6-phosphate isomerase AF_0035 IPR011051 RmlC-like cupin domain superfamily AF_0035 IPR001250 Mannose-6-phosphate isomerase, type I AF_0035 IPR018050 Phosphomannose isomerase, type I, conserved site AF_0036 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0036 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AF_0037 IPR003805 Adenosylcobinamide-GDP ribazoletransferase AF_0038 IPR017814 Mycothiol biosynthesis protein, MshA AF_0038 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AF_0038 IPR001296 Glycosyl transferase, family 1 AF_0039 IPR001173 Glycosyltransferase 2-like AF_0039 IPR029044 Nucleotide-diphospho-sugar transferases AF_0039 IPR039528 DPM1-like AF_0041 IPR003593 AAA+ ATPase domain AF_0041 IPR003439 ABC transporter-like AF_0041 IPR017871 ABC transporter, conserved site AF_0041 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0043 IPR001296 Glycosyl transferase, family 1 AF_0044 IPR036291 NAD(P)-binding domain superfamily AF_0044 IPR016040 NAD(P)-binding domain AF_0044 IPR006368 GDP-mannose 4,6-dehydratase AF_0050 IPR002795 S-adenosylmethionine synthetase, archaea AF_0050 IPR027790 S-adenosylmethionine synthase AF_0051 IPR011650 Peptidase M20, dimerisation domain AF_0051 IPR002933 Peptidase M20 AF_0051 IPR036264 Bacterial exopeptidase dimerisation domain AF_0051 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AF_0051 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AF_0061 IPR018094 Thymidylate kinase AF_0061 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0061 IPR039430 Thymidylate kinase-like domain AF_0062 IPR000644 CBS domain AF_0071 IPR001650 Helicase, C-terminal AF_0071 IPR038257 CRISPR-associated Cas3-type HD domain superfamily AF_0071 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_0071 IPR011545 DEAD/DEAH box helicase domain AF_0071 IPR006474 Helicase Cas3, CRISPR-associated, core AF_0071 IPR041372 Cas3, C-terminal AF_0071 IPR035011 CRISPR-associated endonuclease/helicase Cas3 AF_0071 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0071 IPR006483 CRISPR-associated Cas3-type HD domain AF_0074 IPR036390 Winged helix DNA-binding domain superfamily AF_0074 IPR003142 Biotin protein ligase, C-terminal AF_0074 IPR004409 Biotin operon repressor, helix-turn-helix domain AF_0074 IPR030855 Bifunctional ligase/repressor BirA AF_0074 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AF_0074 IPR036388 Winged helix-like DNA-binding domain superfamily AF_0074 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AF_0074 IPR008988 Transcriptional repressor, C-terminal AF_0074 IPR013196 Helix-turn-helix, type 11 AF_0076 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0076 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_0080 IPR015424 Pyridoxal phosphate-dependent transferase AF_0080 IPR005814 Aminotransferase class-III AF_0080 IPR004636 Acetylornithine/Succinylornithine transaminase family AF_0080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_0086 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_0086 IPR035906 MetI-like superfamily AF_0087 IPR003439 ABC transporter-like AF_0087 IPR003593 AAA+ ATPase domain AF_0087 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AF_0087 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0087 IPR017871 ABC transporter, conserved site AF_0088 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0088 IPR003593 AAA+ ATPase domain AF_0088 IPR003439 ABC transporter-like AF_0088 IPR017871 ABC transporter, conserved site AF_0088 IPR005890 Nitrate transport ATP-binding subunit C/D AF_0089 IPR000873 AMP-dependent synthetase/ligase AF_0089 IPR020845 AMP-binding, conserved site AF_0089 IPR020459 AMP-binding AF_0089 IPR025110 AMP-binding enzyme, C-terminal domain AF_0089 IPR042099 AMP-dependent synthetase-like superfamily AF_0091 IPR011234 Fumarylacetoacetase-like, C-terminal AF_0091 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AF_0092 IPR003593 AAA+ ATPase domain AF_0092 IPR013611 Transport-associated OB, type 2 AF_0092 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AF_0092 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0092 IPR003439 ABC transporter-like AF_0092 IPR008995 Molybdate/tungstate binding, C-terminal AF_0092 IPR017871 ABC transporter, conserved site AF_0092 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA AF_0093 IPR035906 MetI-like superfamily AF_0093 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_0093 IPR011867 Molybdate ABC transporter, permease protein AF_0094 IPR022498 Tungstate ABC transporter, substrate-binding protein WtpA AF_0106 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AF_0106 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AF_0106 IPR006130 Aspartate/ornithine carbamoyltransferase AF_0106 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AF_0106 IPR002082 Aspartate carbamoyltransferase AF_0107 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AF_0107 IPR002801 Aspartate transcarbamylase regulatory subunit AF_0107 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AF_0107 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AF_0107 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily AF_0108 IPR013785 Aldolase-type TIM barrel AF_0108 IPR041720 Aldolase FbaB-like, archaeal-type AF_0108 IPR010210 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase AF_0108 IPR002915 DeoC/FbaB/ lacD aldolase AF_0110 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AF_0110 IPR002319 Phenylalanyl-tRNA synthetase AF_0110 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AF_0110 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AF_0110 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AF_0110 IPR006195 Aminoacyl-tRNA synthetase, class II AF_0112 IPR003000 Sirtuin family AF_0112 IPR026590 Sirtuin family, catalytic core domain AF_0112 IPR026591 Sirtuin, catalytic core small domain superfamily AF_0112 IPR028628 Sirtuin, class U AF_0112 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_0115 IPR003010 Carbon-nitrogen hydrolase AF_0115 IPR036526 Carbon-nitrogen hydrolase superfamily AF_0129 IPR007581 Endonuclease V AF_0130 IPR000286 Histone deacetylase family AF_0130 IPR023801 Histone deacetylase domain AF_0130 IPR037138 Histone deacetylase domain superfamily AF_0130 IPR023696 Ureohydrolase domain superfamily AF_0131 IPR000415 Nitroreductase-like AF_0131 IPR029479 Nitroreductase AF_0140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0140 IPR004033 UbiE/COQ5 methyltransferase AF_0140 IPR023576 UbiE/COQ5 methyltransferase, conserved site AF_0152 IPR018303 P-type ATPase, phosphorylation site AF_0152 IPR023214 HAD superfamily AF_0152 IPR023298 P-type ATPase, transmembrane domain superfamily AF_0152 IPR023299 P-type ATPase, cytoplasmic domain N AF_0152 IPR036412 HAD-like superfamily AF_0152 IPR001757 P-type ATPase AF_0152 IPR027256 P-type ATPase, subfamily IB AF_0152 IPR008250 P-type ATPase, A domain superfamily AF_0154 IPR004923 Iron permease FTR1/Fip1/EfeU AF_0156 IPR007202 4Fe-4S domain AF_0156 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0156 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0156 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB AF_0156 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria AF_0157 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0157 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0159 IPR006656 Molybdopterin oxidoreductase AF_0159 IPR006657 Molybdopterin dinucleotide-binding domain AF_0159 IPR009010 Aspartate decarboxylase-like domain superfamily AF_0159 IPR037946 Tetrathionate reductase subunit A, MopB domain AF_0159 IPR041929 Tetrathionate reductase subunit A, N-terminal AF_0159 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AF_0161 IPR001453 MoaB/Mog domain AF_0161 IPR036135 MoeA, N-terminal and linker domain superfamily AF_0161 IPR005110 MoeA, N-terminal and linker domain AF_0161 IPR036688 MoeA, C-terminal, domain IV superfamily AF_0161 IPR005111 MoeA, C-terminal, domain IV AF_0161 IPR038987 Molybdopterin biosynthesis protein MoeA-like AF_0161 IPR036425 MoaB/Mog-like domain superfamily AF_0164 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit AF_0164 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AF_0164 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AF_0164 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AF_0164 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AF_0166 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0166 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0166 IPR001080 3Fe-4S ferredoxin AF_0167 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_0167 IPR016440 Rubredoxin-oxygen oxidoreductase AF_0167 IPR029039 Flavoprotein-like superfamily AF_0167 IPR008254 Flavodoxin/nitric oxide synthase AF_0167 IPR001279 Metallo-beta-lactamase AF_0171 IPR000572 Oxidoreductase, molybdopterin-binding domain AF_0171 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily AF_0175 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0175 IPR006311 Twin-arginine translocation pathway, signal sequence AF_0175 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0176 IPR017840 DMSO reductase family, type II, molybdopterin subunit AF_0176 IPR037943 Nitrate reductase alpha subunit-like, MopB domain AF_0176 IPR006656 Molybdopterin oxidoreductase AF_0176 IPR006657 Molybdopterin dinucleotide-binding domain AF_0176 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AF_0176 IPR006311 Twin-arginine translocation pathway, signal sequence AF_0176 IPR009010 Aspartate decarboxylase-like domain superfamily AF_0185 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AF_0186 IPR015424 Pyridoxal phosphate-dependent transferase AF_0186 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_0186 IPR016454 Cysteine desulfurase AF_0186 IPR010240 Cysteine desulfurase IscS AF_0186 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AF_0186 IPR000192 Aminotransferase class V domain AF_0186 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal AF_0186 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_0188 IPR036868 TusA-like domain superfamily AF_0188 IPR001455 TusA-like domain AF_0188 IPR022931 Sulfur carrier protein TusA AF_0191 IPR023299 P-type ATPase, cytoplasmic domain N AF_0191 IPR001757 P-type ATPase AF_0191 IPR027256 P-type ATPase, subfamily IB AF_0191 IPR023298 P-type ATPase, transmembrane domain superfamily AF_0191 IPR008250 P-type ATPase, A domain superfamily AF_0191 IPR036412 HAD-like superfamily AF_0191 IPR023214 HAD superfamily AF_0191 IPR017969 Heavy-metal-associated, conserved site AF_0191 IPR006121 Heavy metal-associated domain, HMA AF_0191 IPR018303 P-type ATPase, phosphorylation site AF_0191 IPR036163 Heavy metal-associated domain superfamily AF_0192 IPR027256 P-type ATPase, subfamily IB AF_0192 IPR001757 P-type ATPase AF_0192 IPR036163 Heavy metal-associated domain superfamily AF_0192 IPR023299 P-type ATPase, cytoplasmic domain N AF_0192 IPR006121 Heavy metal-associated domain, HMA AF_0192 IPR023214 HAD superfamily AF_0192 IPR017969 Heavy-metal-associated, conserved site AF_0192 IPR018303 P-type ATPase, phosphorylation site AF_0192 IPR023298 P-type ATPase, transmembrane domain superfamily AF_0192 IPR036412 HAD-like superfamily AF_0192 IPR008250 P-type ATPase, A domain superfamily AF_0196 IPR042099 AMP-dependent synthetase-like superfamily AF_0196 IPR025110 AMP-binding enzyme, C-terminal domain AF_0196 IPR020845 AMP-binding, conserved site AF_0196 IPR000873 AMP-dependent synthetase/ligase AF_0197 IPR042099 AMP-dependent synthetase-like superfamily AF_0197 IPR000873 AMP-dependent synthetase/ligase AF_0197 IPR020845 AMP-binding, conserved site AF_0197 IPR005914 Acetoacetyl-CoA synthase AF_0197 IPR025110 AMP-binding enzyme, C-terminal domain AF_0198 IPR015590 Aldehyde dehydrogenase domain AF_0198 IPR016163 Aldehyde dehydrogenase, C-terminal AF_0198 IPR016161 Aldehyde/histidinol dehydrogenase AF_0198 IPR011966 Phenylacetic acid degradation protein PaaN AF_0198 IPR029069 HotDog domain superfamily AF_0198 IPR002539 MaoC-like dehydratase domain AF_0198 IPR016162 Aldehyde dehydrogenase, N-terminal AF_0199 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_0199 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_0199 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_0199 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_0199 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_0199 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_0200 IPR020845 AMP-binding, conserved site AF_0200 IPR042099 AMP-dependent synthetase-like superfamily AF_0200 IPR000873 AMP-dependent synthetase/ligase AF_0205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0205 IPR004498 Ribosomal protein L11 methyltransferase AF_0208 IPR003594 Histidine kinase/HSP90-like ATPase AF_0208 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_0208 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_0208 IPR005467 Histidine kinase domain AF_0208 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_0208 IPR006290 Heavy metal sensor kinase AF_0208 IPR003660 HAMP domain AF_0208 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_0209 IPR002830 UbiD decarboxylyase family AF_0209 IPR022390 4-hydroxybenzoate decarboxylase subunit C AF_0211 IPR038076 MgtE, N-terminal domain superfamily AF_0211 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AF_0211 IPR006667 SLC41 divalent cation transporters, integral membrane domain AF_0211 IPR006668 Magnesium transporter, MgtE intracellular domain AF_0211 IPR000644 CBS domain AF_0211 IPR006669 Magnesium transporter MgtE AF_0211 IPR038048 Magnesium transporter MgtE, transmembrane domain AF_0212 IPR001692 Histidinol dehydrogenase, conserved site AF_0212 IPR016161 Aldehyde/histidinol dehydrogenase AF_0212 IPR012131 Histidinol dehydrogenase AF_0212 IPR022695 Histidinol dehydrogenase, monofunctional AF_0216 IPR004498 Ribosomal protein L11 methyltransferase AF_0216 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0217 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AF_0217 IPR003148 Regulator of K+ conductance, N-terminal AF_0217 IPR006153 Cation/H+ exchanger AF_0217 IPR036291 NAD(P)-binding domain superfamily AF_0217 IPR006037 Regulator of K+ conductance, C-terminal AF_0217 IPR038770 Sodium/solute symporter superfamily AF_0219 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AF_0219 IPR005671 2-isopropylmalate synthase, bacterial-type AF_0219 IPR000891 Pyruvate carboxyltransferase AF_0219 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AF_0219 IPR013785 Aldolase-type TIM barrel AF_0219 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AF_0220 IPR005481 Biotin carboxylase-like, N-terminal domain AF_0220 IPR011764 Biotin carboxylation domain AF_0220 IPR005482 Biotin carboxylase, C-terminal AF_0220 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AF_0220 IPR016185 Pre-ATP-grasp domain superfamily AF_0220 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AF_0220 IPR011761 ATP-grasp fold AF_0220 IPR011054 Rudiment single hybrid motif AF_0221 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AF_0221 IPR003439 ABC transporter-like AF_0221 IPR017871 ABC transporter, conserved site AF_0221 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0221 IPR003593 AAA+ ATPase domain AF_0222 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0222 IPR017871 ABC transporter, conserved site AF_0222 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AF_0222 IPR003593 AAA+ ATPase domain AF_0222 IPR003439 ABC transporter-like AF_0224 IPR001851 ABC transporter, permease AF_0226 IPR029479 Nitroreductase AF_0226 IPR016446 Flavin oxidoreductase Frp family AF_0226 IPR000415 Nitroreductase-like AF_0227 IPR018528 Prephenate dehydratase, conserved site AF_0227 IPR036979 Chorismate mutase domain superfamily AF_0227 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AF_0227 IPR002701 Chorismate mutase II, prokaryotic-type AF_0227 IPR001086 Prephenate dehydratase AF_0227 IPR002912 ACT domain AF_0227 IPR036263 Chorismate mutase type II superfamily AF_0228 IPR013785 Aldolase-type TIM barrel AF_0228 IPR018508 3-dehydroquinate dehydratase, active site AF_0228 IPR001381 3-dehydroquinate dehydratase type I AF_0229 IPR002812 3-dehydroquinate synthase AF_0230 IPR002915 DeoC/FbaB/ lacD aldolase AF_0230 IPR041720 Aldolase FbaB-like, archaeal-type AF_0230 IPR013785 Aldolase-type TIM barrel AF_0230 IPR010210 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase AF_0231 IPR018313 Solute-binding protein family 3, conserved site AF_0231 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AF_0234 IPR001279 Metallo-beta-lactamase AF_0234 IPR022877 Protein of unknown funcion UPF0173 AF_0234 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_0235 IPR001915 Peptidase M48 AF_0235 IPR022919 Peptidase M48, protease HtpX, putative AF_0237 IPR001734 Sodium/solute symporter AF_0237 IPR038377 Sodium/glucose symporter superfamily AF_0239 IPR000836 Phosphoribosyltransferase domain AF_0239 IPR029057 Phosphoribosyltransferase-like AF_0239 IPR023747 Xanthine-guanine phosphoribosyltransferase AF_0240 IPR006680 Amidohydrolase-related AF_0240 IPR011059 Metal-dependent hydrolase, composite domain superfamily AF_0240 IPR006679 Adenine deaminase AF_0240 IPR032466 Metal-dependent hydrolase AF_0240 IPR026912 Adenine deaminase C-terminal domain AF_0241 IPR036413 YaeB-like superfamily AF_0241 IPR023370 TrmO-like, N-terminal domain AF_0241 IPR041369 TrmO, C-terminal AF_0241 IPR040372 YaeB-like AF_0241 IPR023368 Uncharacterised protein family UPF0066, conserved site AF_0241 IPR036414 YaeB, N-terminal domain superfamily AF_0242 IPR011004 Trimeric LpxA-like superfamily AF_0242 IPR005835 Nucleotidyl transferase domain AF_0242 IPR005836 ADP-glucose pyrophosphorylase, conserved site AF_0242 IPR011831 Glucose-1-phosphate adenylyltransferase AF_0242 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial AF_0242 IPR029044 Nucleotide-diphospho-sugar transferases AF_0245 IPR036390 Winged helix DNA-binding domain superfamily AF_0245 IPR036388 Winged helix-like DNA-binding domain superfamily AF_0245 IPR040767 Diphteria toxin repressor, SH3 domain AF_0245 IPR022689 Iron dependent repressor AF_0245 IPR007167 Ferrous iron transporter FeoA domain AF_0245 IPR001367 Iron dependent repressor, metal binding and dimerisation domain AF_0245 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily AF_0245 IPR008988 Transcriptional repressor, C-terminal AF_0245 IPR038157 Ferrous iron transporter, core domain AF_0245 IPR022687 DTXR-type HTH domain AF_0246 IPR011640 Ferrous iron transport protein B, C-terminal AF_0246 IPR005225 Small GTP-binding protein domain AF_0246 IPR041069 FeoB, cytosolic helical domain AF_0246 IPR003373 Ferrous iron transport protein B AF_0246 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AF_0246 IPR006073 GTP binding domain AF_0246 IPR008988 Transcriptional repressor, C-terminal AF_0246 IPR007167 Ferrous iron transporter FeoA domain AF_0246 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0246 IPR038157 Ferrous iron transporter, core domain AF_0246 IPR030389 FeoB-type guanine nucleotide-binding (G) domain AF_0248 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AF_0248 IPR023753 FAD/NAD(P)-binding domain AF_0248 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0248 IPR013785 Aldolase-type TIM barrel AF_0252 IPR004468 CTP synthase AF_0252 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0252 IPR029062 Class I glutamine amidotransferase-like AF_0252 IPR017456 CTP synthase, N-terminal AF_0252 IPR017926 Glutamine amidotransferase AF_0252 IPR033828 CTP synthase GATase domain AF_0253 IPR022310 NAD/GMP synthase AF_0253 IPR025777 GMP synthetase ATP pyrophosphatase domain AF_0253 IPR022955 GMP synthase AF_0253 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0253 IPR001674 GMP synthase, C-terminal AF_0253 IPR017926 Glutamine amidotransferase AF_0253 IPR029062 Class I glutamine amidotransferase-like AF_0253 IPR004739 GMP synthase, glutamine amidotransferase AF_0254 IPR023753 FAD/NAD(P)-binding domain AF_0254 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF_0254 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AF_0254 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0260 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AF_0260 IPR022861 Glutamine-tRNA ligase, bacterial AF_0260 IPR004514 Glutamine-tRNA synthetase AF_0260 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AF_0260 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain AF_0260 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AF_0260 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AF_0260 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AF_0260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0260 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily AF_0262 IPR020845 AMP-binding, conserved site AF_0262 IPR000873 AMP-dependent synthetase/ligase AF_0262 IPR042099 AMP-dependent synthetase-like superfamily AF_0262 IPR025110 AMP-binding enzyme, C-terminal domain AF_0263 IPR029044 Nucleotide-diphospho-sugar transferases AF_0263 IPR000462 CDP-alcohol phosphatidyltransferase AF_0263 IPR005835 Nucleotidyl transferase domain AF_0265 IPR036425 MoaB/Mog-like domain superfamily AF_0265 IPR001453 MoaB/Mog domain AF_0265 IPR008284 Molybdenum cofactor biosynthesis, conserved site AF_0265 IPR012245 Molybdenum cofactor biosynthesis protein MoaB AF_0266 IPR000620 EamA domain AF_0270 IPR013766 Thioredoxin domain AF_0270 IPR024706 Peroxiredoxin, AhpC-type AF_0270 IPR019479 Peroxiredoxin, C-terminal AF_0270 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AF_0270 IPR022915 Peroxiredoxin, TDXH subfamily AF_0270 IPR036249 Thioredoxin-like superfamily AF_0273 IPR023753 FAD/NAD(P)-binding domain AF_0273 IPR041117 SoxA, A3 domain AF_0273 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AF_0273 IPR006222 Aminomethyltransferase, folate-binding domain AF_0273 IPR006277 Sarcosine oxidase, alpha subunit AF_0273 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal AF_0273 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AF_0273 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AF_0273 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0273 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AF_0274 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0274 IPR006076 FAD dependent oxidoreductase AF_0274 IPR023080 D-amino acid dehydrogenase DadA AF_0276 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily AF_0276 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like AF_0276 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative AF_0280 IPR012340 Nucleic acid-binding, OB-fold AF_0280 IPR030390 RNA methyltransferase TrmA, active site AF_0280 IPR010280 (Uracil-5)-methyltransferase family AF_0280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0280 IPR002792 TRAM domain AF_0283 IPR020617 Thiolase, C-terminal AF_0283 IPR020610 Thiolase, active site AF_0283 IPR016039 Thiolase-like AF_0283 IPR002155 Thiolase AF_0283 IPR020615 Thiolase, acyl-enzyme intermediate active site AF_0283 IPR012806 Acetyl-CoA C-acyltransferase FadI AF_0283 IPR020616 Thiolase, N-terminal AF_0283 IPR020613 Thiolase, conserved site AF_0285 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_0285 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_0285 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_0285 IPR036291 NAD(P)-binding domain superfamily AF_0285 IPR022694 3-hydroxyacyl-CoA dehydrogenase AF_0285 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_0285 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_0286 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0286 IPR012255 Electron transfer flavoprotein, beta subunit AF_0286 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AF_0286 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AF_0286 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal AF_0287 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_0287 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AF_0287 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AF_0287 IPR001308 Electron transfer flavoprotein alpha subunit/FixB AF_0287 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal AF_0287 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0287 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AF_0288 IPR002891 Adenylyl-sulfate kinase AF_0288 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0290 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0290 IPR017871 ABC transporter, conserved site AF_0290 IPR003439 ABC transporter-like AF_0290 IPR003593 AAA+ ATPase domain AF_0302 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AF_0302 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AF_0302 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_0302 IPR036291 NAD(P)-binding domain superfamily AF_0302 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AF_0302 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AF_0302 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AF_0302 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AF_0321 IPR029044 Nucleotide-diphospho-sugar transferases AF_0321 IPR002495 Glycosyl transferase, family 8 AF_0321 IPR001173 Glycosyltransferase 2-like AF_0322 IPR001173 Glycosyltransferase 2-like AF_0322 IPR023981 Putative mycofactocin biosynthesis glycosyltransferase AF_0322 IPR029044 Nucleotide-diphospho-sugar transferases AF_0324 IPR005888 dTDP-glucose 4,6-dehydratase AF_0324 IPR036291 NAD(P)-binding domain superfamily AF_0324 IPR016040 NAD(P)-binding domain AF_0325 IPR029044 Nucleotide-diphospho-sugar transferases AF_0325 IPR005908 Glucose-1-phosphate thymidylyltransferase, long form AF_0325 IPR005835 Nucleotidyl transferase domain AF_0327 IPR017814 Mycothiol biosynthesis protein, MshA AF_0327 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AF_0327 IPR001296 Glycosyl transferase, family 1 AF_0328 IPR001173 Glycosyltransferase 2-like AF_0328 IPR029044 Nucleotide-diphospho-sugar transferases AF_0328 IPR039528 DPM1-like AF_0332 IPR008915 Peptidase M50 AF_0332 IPR000644 CBS domain AF_0332 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS AF_0333 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_0333 IPR004925 HpaB/PvcC/4-BUDH AF_0333 IPR024719 HpaB/PvcC/4-BUDH C-terminal AF_0333 IPR024674 HpaB/PvcC/4-BUDH N-terminal AF_0333 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_0338 IPR001482 Type II/IV secretion system protein AF_0338 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0338 IPR022399 Helicase/secretion neighbourhood ATPase AF_0339 IPR039697 Iron-type alcohol dehydrogenase-like AF_0339 IPR013460 Lactaldehyde reductase AF_0339 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AF_0339 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AF_0343 IPR005025 NADPH-dependent FMN reductase-like AF_0343 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic AF_0343 IPR010089 Flavoprotein WrbA-like AF_0343 IPR029039 Flavoprotein-like superfamily AF_0343 IPR008254 Flavodoxin/nitric oxide synthase AF_0344 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain AF_0344 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily AF_0346 IPR006121 Heavy metal-associated domain, HMA AF_0346 IPR027256 P-type ATPase, subfamily IB AF_0346 IPR001757 P-type ATPase AF_0346 IPR017969 Heavy-metal-associated, conserved site AF_0346 IPR036412 HAD-like superfamily AF_0346 IPR023214 HAD superfamily AF_0346 IPR023298 P-type ATPase, transmembrane domain superfamily AF_0346 IPR018303 P-type ATPase, phosphorylation site AF_0346 IPR023299 P-type ATPase, cytoplasmic domain N AF_0346 IPR008250 P-type ATPase, A domain superfamily AF_0346 IPR036163 Heavy metal-associated domain superfamily AF_0355 IPR004496 Ferredoxin-type protein NapF AF_0355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0356 IPR011877 Ribokinase AF_0356 IPR011611 Carbohydrate kinase PfkB AF_0356 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AF_0356 IPR002139 Ribokinase/fructokinase AF_0356 IPR029056 Ribokinase-like AF_0358 IPR004609 ATP-dependent DNA helicase RecG AF_0358 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_0358 IPR001650 Helicase, C-terminal AF_0358 IPR012340 Nucleic acid-binding, OB-fold AF_0358 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0358 IPR033454 RecG, wedge domain AF_0358 IPR011545 DEAD/DEAH box helicase domain AF_0361 IPR005886 UDP-glucose 4-epimerase AF_0361 IPR001509 NAD-dependent epimerase/dehydratase AF_0361 IPR036291 NAD(P)-binding domain superfamily AF_0364 IPR003593 AAA+ ATPase domain AF_0364 IPR027065 Lon protease AF_0364 IPR003959 ATPase, AAA-type, core AF_0364 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_0364 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0364 IPR008268 Peptidase S16, active site AF_0364 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0364 IPR014251 Sporulation protease LonB AF_0364 IPR008269 Peptidase S16, Lon proteolytic domain AF_0366 IPR000873 AMP-dependent synthetase/ligase AF_0366 IPR011904 Acetate-CoA ligase AF_0366 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AF_0366 IPR020845 AMP-binding, conserved site AF_0366 IPR025110 AMP-binding enzyme, C-terminal domain AF_0366 IPR042099 AMP-dependent synthetase-like superfamily AF_0367 IPR011701 Major facilitator superfamily AF_0367 IPR020846 Major facilitator superfamily domain AF_0367 IPR036259 MFS transporter superfamily AF_0370 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal AF_0370 IPR011559 Initiation factor 2B alpha/beta/delta AF_0370 IPR000649 Initiation factor 2B-related AF_0370 IPR005251 Methylthioribose-1-phosphate isomerase AF_0370 IPR037171 NagB/RpiA transferase-like AF_0371 IPR003265 HhH-GPD domain AF_0371 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AF_0371 IPR011257 DNA glycosylase AF_0371 IPR012092 8-oxoguanine DNA glycosylase/DNA lyase, thermostable AF_0372 IPR016193 Cytidine deaminase-like AF_0372 IPR003786 Sulfur carrier protein FdhD AF_0374 IPR006357 HAD-superfamily hydrolase, subfamily IIA AF_0374 IPR023214 HAD superfamily AF_0374 IPR036412 HAD-like superfamily AF_0376 IPR016218 Acetyl-CoA decarbonylase/synthase complex, gamma subunit AF_0376 IPR007202 4Fe-4S domain AF_0376 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel AF_0376 IPR011005 Dihydropteroate synthase-like AF_0377 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel AF_0377 IPR011005 Dihydropteroate synthase-like AF_0377 IPR004486 CO dehydrogenase/acetyl-CoA synthase delta subunit AF_0378 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type AF_0378 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0378 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AF_0379 IPR041350 Carbon monoxide dehydrogenase subunit alpha ,N-terminal AF_0379 IPR038571 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase, domain 3 superfamily AF_0379 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit AF_0379 IPR016099 Prismane-like, alpha/beta-sandwich AF_0379 IPR011254 Prismane-like superfamily AF_0386 IPR029057 Phosphoribosyltransferase-like AF_0386 IPR000836 Phosphoribosyltransferase domain AF_0386 IPR023031 Orotate phosphoribosyltransferase AF_0386 IPR006273 Orotate phosphoribosyltransferase, bacterial AF_0388 IPR034405 F420, menaquinone cofactor biosynthesis AF_0388 IPR022432 Aminodeoxyfutalosine synthase AF_0388 IPR006638 Elp3/MiaB/NifB AF_0388 IPR020050 FO synthase, subunit 2 AF_0388 IPR007197 Radical SAM AF_0388 IPR013785 Aldolase-type TIM barrel AF_0390 IPR013785 Aldolase-type TIM barrel AF_0390 IPR034405 F420, menaquinone cofactor biosynthesis AF_0390 IPR022431 Cyclic dehypoxanthine futalosine synthase AF_0390 IPR007197 Radical SAM AF_0390 IPR020050 FO synthase, subunit 2 AF_0390 IPR006638 Elp3/MiaB/NifB AF_0393 IPR003593 AAA+ ATPase domain AF_0393 IPR003439 ABC transporter-like AF_0393 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0394 IPR006094 FAD linked oxidase, N-terminal AF_0394 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AF_0394 IPR004490 Glycolate oxidase subunit GlcD AF_0394 IPR004113 FAD-linked oxidase, C-terminal AF_0394 IPR016164 FAD-linked oxidase-like, C-terminal AF_0394 IPR036318 FAD-binding, type PCMH-like superfamily AF_0394 IPR016166 FAD-binding domain, PCMH-type AF_0395 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AF_0395 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0395 IPR023753 FAD/NAD(P)-binding domain AF_0395 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF_0400 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF_0400 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AF_0400 IPR023753 FAD/NAD(P)-binding domain AF_0400 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0401 IPR002139 Ribokinase/fructokinase AF_0401 IPR037171 NagB/RpiA transferase-like AF_0401 IPR004788 Ribose 5-phosphate isomerase, type A AF_0401 IPR011611 Carbohydrate kinase PfkB AF_0401 IPR029056 Ribokinase-like AF_0401 IPR011877 Ribokinase AF_0403 IPR038597 GGGP/HepGP synthase superfamily AF_0403 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase AF_0403 IPR039074 GGGP/HepGP synthase group I AF_0406 IPR042081 RNA 2'-phosphotransferase, C-terminal domain AF_0406 IPR002745 Phosphotransferase KptA/Tpt1 AF_0406 IPR022928 RNA 2'-phosphotransferase KptA, putative AF_0406 IPR042080 RNA 2'-phosphotransferase, N-terminal domain AF_0409 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type AF_0409 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AF_0409 IPR004839 Aminotransferase, class I/classII AF_0409 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_0409 IPR015424 Pyridoxal phosphate-dependent transferase AF_0409 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_0409 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 AF_0410 IPR013655 PAS fold-3 AF_0410 IPR013767 PAS fold AF_0410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_0410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_0410 IPR001610 PAC motif AF_0410 IPR035965 PAS domain superfamily AF_0410 IPR000014 PAS domain AF_0410 IPR005467 Histidine kinase domain AF_0410 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_0410 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_0410 IPR003594 Histidine kinase/HSP90-like ATPase AF_0411 IPR015803 Cysteine-tRNA ligase AF_0411 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AF_0411 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AF_0411 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AF_0411 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0411 IPR032678 tRNA synthetases class I, catalytic domain AF_0419 IPR011060 Ribulose-phosphate binding barrel AF_0419 IPR005137 Membrane complex biogenesis protein, BtpA family AF_0422 IPR014776 Tetrapyrrole methylase, subdomain 2 AF_0422 IPR035996 Tetrapyrrole methylase superfamily AF_0422 IPR000878 Tetrapyrrole methylase AF_0422 IPR006366 Uroporphyrin-III C-methyltransferase AF_0422 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AF_0422 IPR036291 NAD(P)-binding domain superfamily AF_0422 IPR037115 Sirohaem synthase, dimerisation domain superfamily AF_0422 IPR006367 Sirohaem synthase, N-terminal AF_0422 IPR019478 Sirohaem synthase, dimerisation domain AF_0422 IPR014777 Tetrapyrrole methylase, subdomain 1 AF_0422 IPR012409 Sirohaem synthase AF_0423 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0423 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AF_0423 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AF_0423 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit AF_0423 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AF_0424 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0424 IPR011808 Sulphite reductase, dissimilatory-type beta subunit AF_0424 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AF_0424 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AF_0424 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AF_0424 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0428 IPR015349 GTP-binding protein OBG, C-terminal AF_0428 IPR006169 GTP1/OBG domain AF_0428 IPR006073 GTP binding domain AF_0428 IPR005225 Small GTP-binding protein domain AF_0428 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0428 IPR006074 GTP1/OBG, conserved site AF_0428 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily AF_0428 IPR031167 OBG-type guanine nucleotide-binding (G) domain AF_0428 IPR036726 GTP1/OBG domain superfamily AF_0428 IPR014100 GTP-binding protein Obg/CgtA AF_0428 IPR035101 GTP-binding protein, Obg-type AF_0430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0430 IPR017871 ABC transporter, conserved site AF_0430 IPR003593 AAA+ ATPase domain AF_0430 IPR003439 ABC transporter-like AF_0431 IPR037294 ABC transporter, BtuC-like AF_0431 IPR000522 ABC transporter, permease protein, BtuC-like AF_0433 IPR023370 TrmO-like, N-terminal domain AF_0433 IPR036413 YaeB-like superfamily AF_0433 IPR036414 YaeB, N-terminal domain superfamily AF_0433 IPR040372 YaeB-like AF_0434 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_0434 IPR022694 3-hydroxyacyl-CoA dehydrogenase AF_0434 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_0434 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_0434 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_0434 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_0434 IPR036291 NAD(P)-binding domain superfamily AF_0435 IPR014748 Enoyl-CoA hydratase, C-terminal AF_0435 IPR001753 Enoyl-CoA hydratase/isomerase AF_0435 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AF_0435 IPR029045 ClpP/crotonase-like domain superfamily AF_0436 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_0436 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_0436 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_0436 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_0436 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_0436 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_0436 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_0438 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AF_0438 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AF_0438 IPR016039 Thiolase-like AF_0438 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AF_0440 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily AF_0440 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family AF_0441 IPR024924 7-carboxy-7-deazaguanine synthase-like AF_0441 IPR013785 Aldolase-type TIM barrel AF_0441 IPR007197 Radical SAM AF_0442 IPR018317 Queuosine biosynthesis protein QueC AF_0442 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0444 IPR023214 HAD superfamily AF_0444 IPR006379 HAD-superfamily hydrolase, subfamily IIB AF_0444 IPR036412 HAD-like superfamily AF_0444 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AF_0444 IPR029000 Cyclophilin-like domain superfamily AF_0444 IPR000150 Cof family AF_0448 IPR003594 Histidine kinase/HSP90-like ATPase AF_0448 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_0448 IPR005467 Histidine kinase domain AF_0448 IPR000014 PAS domain AF_0448 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_0448 IPR035965 PAS domain superfamily AF_0448 IPR013767 PAS fold AF_0448 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_0448 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_0449 IPR001789 Signal transduction response regulator, receiver domain AF_0449 IPR011006 CheY-like superfamily AF_0450 IPR039506 SpoOB, alpha-helical domain AF_0450 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AF_0450 IPR033463 Single cache domain 3 AF_0450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_0450 IPR003594 Histidine kinase/HSP90-like ATPase AF_0450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_0450 IPR029151 Periplasmic sensor-like domain superfamily AF_0450 IPR013767 PAS fold AF_0450 IPR035965 PAS domain superfamily AF_0450 IPR000014 PAS domain AF_0450 IPR005467 Histidine kinase domain AF_0452 IPR003593 AAA+ ATPase domain AF_0452 IPR041166 LapB, rubredoxin metal binding domain AF_0452 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_0452 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0452 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AF_0452 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0452 IPR004504 DNA repair protein RadA AF_0455 IPR023753 FAD/NAD(P)-binding domain AF_0455 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AF_0455 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0455 IPR013785 Aldolase-type TIM barrel AF_0458 IPR005841 Alpha-D-phosphohexomutase superfamily AF_0458 IPR006352 Phosphoglucosamine mutase, bacterial type AF_0458 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AF_0458 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AF_0458 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AF_0458 IPR005843 Alpha-D-phosphohexomutase, C-terminal AF_0458 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AF_0458 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AF_0459 IPR000731 Sterol-sensing domain AF_0459 IPR004869 Membrane transport protein MMPL domain AF_0464 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0464 IPR011777 Geranylgeranyl reductase family AF_0464 IPR002938 FAD-binding domain AF_0465 IPR005743 DNA gyrase, subunit A AF_0465 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AF_0465 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AF_0465 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AF_0465 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AF_0465 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AF_0465 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AF_0467 IPR011852 TRAP transporter solute receptor, TAXI family AF_0468 IPR029061 Thiamin diphosphate-binding fold AF_0468 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AF_0469 IPR029061 Thiamin diphosphate-binding fold AF_0469 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain AF_0469 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit AF_0469 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AF_0469 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain AF_0469 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AF_0469 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal AF_0473 IPR036412 HAD-like superfamily AF_0473 IPR023298 P-type ATPase, transmembrane domain superfamily AF_0473 IPR008250 P-type ATPase, A domain superfamily AF_0473 IPR001757 P-type ATPase AF_0473 IPR027256 P-type ATPase, subfamily IB AF_0473 IPR036163 Heavy metal-associated domain superfamily AF_0473 IPR006121 Heavy metal-associated domain, HMA AF_0473 IPR023299 P-type ATPase, cytoplasmic domain N AF_0473 IPR017969 Heavy-metal-associated, conserved site AF_0473 IPR023214 HAD superfamily AF_0473 IPR018303 P-type ATPase, phosphorylation site AF_0474 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AF_0474 IPR019888 Transcription regulator AsnC-type AF_0474 IPR036388 Winged helix-like DNA-binding domain superfamily AF_0474 IPR011008 Dimeric alpha-beta barrel AF_0474 IPR036390 Winged helix DNA-binding domain superfamily AF_0474 IPR000485 AsnC-type HTH domain AF_0475 IPR004706 Arsenical-resistance protein Acr3 AF_0475 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 AF_0475 IPR038770 Sodium/solute symporter superfamily AF_0477 IPR037219 Peptidase M41-like AF_0477 IPR000642 Peptidase M41 AF_0477 IPR041569 AAA ATPase, AAA+ lid domain AF_0477 IPR003959 ATPase, AAA-type, core AF_0477 IPR003960 ATPase, AAA-type, conserved site AF_0477 IPR005936 Peptidase, FtsH AF_0477 IPR003593 AAA+ ATPase domain AF_0477 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0478 IPR001279 Metallo-beta-lactamase AF_0478 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_0478 IPR022877 Protein of unknown funcion UPF0173 AF_0481 IPR029055 Nucleophile aminohydrolases, N-terminal AF_0481 IPR023333 Proteasome B-type subunit AF_0481 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria AF_0481 IPR001353 Proteasome, subunit alpha/beta AF_0482 IPR022712 Beta-Casp domain AF_0482 IPR001279 Metallo-beta-lactamase AF_0482 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_0482 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AF_0484 IPR016299 Riboflavin biosynthesis protein RibBA AF_0484 IPR036144 RibA-like superfamily AF_0484 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AF_0484 IPR032677 GTP cyclohydrolase II AF_0484 IPR000926 GTP cyclohydrolase II, RibA AF_0484 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AF_0487 IPR029055 Nucleophile aminohydrolases, N-terminal AF_0487 IPR014395 Penicillin/GL-7-ACA/AHL acylase AF_0487 IPR023343 Penicillin amidase type, domain 1 AF_0487 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase AF_0492 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AF_0492 IPR001247 Exoribonuclease, phosphorolytic domain 1 AF_0492 IPR015847 Exoribonuclease, phosphorolytic domain 2 AF_0492 IPR004087 K Homology domain AF_0492 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily AF_0492 IPR004088 K Homology domain, type 1 AF_0492 IPR036612 K Homology domain, type 1 superfamily AF_0492 IPR012340 Nucleic acid-binding, OB-fold AF_0492 IPR027408 PNPase/RNase PH domain superfamily AF_0492 IPR036345 Exoribonuclease, PH domain 2 superfamily AF_0492 IPR012162 Polyribonucleotide nucleotidyltransferase AF_0492 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0492 IPR003029 S1 domain AF_0492 IPR022967 RNA-binding domain, S1 AF_0493 IPR015847 Exoribonuclease, phosphorolytic domain 2 AF_0493 IPR012162 Polyribonucleotide nucleotidyltransferase AF_0493 IPR027408 PNPase/RNase PH domain superfamily AF_0493 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AF_0493 IPR036612 K Homology domain, type 1 superfamily AF_0493 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily AF_0493 IPR012340 Nucleic acid-binding, OB-fold AF_0493 IPR003029 S1 domain AF_0493 IPR022967 RNA-binding domain, S1 AF_0493 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0493 IPR004088 K Homology domain, type 1 AF_0493 IPR004087 K Homology domain AF_0493 IPR036345 Exoribonuclease, PH domain 2 superfamily AF_0493 IPR001247 Exoribonuclease, phosphorolytic domain 1 AF_0494 IPR002381 Ribonuclease PH, bacterial-type AF_0494 IPR018336 Ribonuclease PH, conserved site AF_0494 IPR027408 PNPase/RNase PH domain superfamily AF_0494 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0494 IPR015847 Exoribonuclease, phosphorolytic domain 2 AF_0494 IPR036345 Exoribonuclease, PH domain 2 superfamily AF_0494 IPR001247 Exoribonuclease, phosphorolytic domain 1 AF_0497 IPR006172 DNA-directed DNA polymerase, family B AF_0497 IPR017964 DNA-directed DNA polymerase, family B, conserved site AF_0497 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain AF_0497 IPR042087 DNA polymerase family B, C-terminal domain AF_0497 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain AF_0497 IPR012337 Ribonuclease H-like superfamily AF_0497 IPR036397 Ribonuclease H superfamily AF_0497 IPR023211 DNA polymerase, palm domain superfamily AF_0499 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0499 IPR006311 Twin-arginine translocation pathway, signal sequence AF_0499 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0506 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0506 IPR036197 NarG-like superfamily AF_0506 IPR004017 Cysteine-rich domain AF_0506 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0506 IPR023234 NarG-like domain AF_0506 IPR009051 Alpha-helical ferredoxin AF_0508 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ AF_0508 IPR013785 Aldolase-type TIM barrel AF_0508 IPR011060 Ribulose-phosphate binding barrel AF_0508 IPR033755 PdxS/SNZ N-terminal domain AF_0509 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO AF_0509 IPR021196 PdxT/SNO family, conserved site AF_0509 IPR029062 Class I glutamine amidotransferase-like AF_0512 IPR023576 UbiE/COQ5 methyltransferase, conserved site AF_0512 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0512 IPR004033 UbiE/COQ5 methyltransferase AF_0520 IPR006203 GHMP kinase, ATP-binding, conserved site AF_0520 IPR006204 GHMP kinase N-terminal domain AF_0520 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_0520 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0520 IPR000870 Homoserine kinase AF_0520 IPR036554 GHMP kinase, C-terminal domain superfamily AF_0520 IPR013750 GHMP kinase, C-terminal domain AF_0522 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE AF_0522 IPR036264 Bacterial exopeptidase dimerisation domain AF_0522 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AF_0522 IPR011650 Peptidase M20, dimerisation domain AF_0522 IPR002933 Peptidase M20 AF_0527 IPR004087 K Homology domain AF_0527 IPR012340 Nucleic acid-binding, OB-fold AF_0527 IPR012162 Polyribonucleotide nucleotidyltransferase AF_0527 IPR001247 Exoribonuclease, phosphorolytic domain 1 AF_0527 IPR003029 S1 domain AF_0527 IPR027408 PNPase/RNase PH domain superfamily AF_0527 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AF_0527 IPR015847 Exoribonuclease, phosphorolytic domain 2 AF_0527 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0527 IPR004088 K Homology domain, type 1 AF_0527 IPR022967 RNA-binding domain, S1 AF_0527 IPR036612 K Homology domain, type 1 superfamily AF_0527 IPR036345 Exoribonuclease, PH domain 2 superfamily AF_0528 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AF_0528 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit AF_0528 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit AF_0528 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain AF_0528 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AF_0528 IPR001433 Oxidoreductase FAD/NAD(P)-binding AF_0528 IPR017927 FAD-binding domain, ferredoxin reductase-type AF_0528 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily AF_0528 IPR000951 Phthalate dioxygenase reductase AF_0528 IPR017938 Riboflavin synthase-like beta-barrel AF_0530 IPR002288 DNA gyrase B subunit, C-terminal AF_0530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_0530 IPR001241 DNA topoisomerase, type IIA AF_0530 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AF_0530 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AF_0530 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AF_0530 IPR018522 DNA topoisomerase, type IIA, conserved site AF_0530 IPR006171 TOPRIM domain AF_0530 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_0530 IPR003594 Histidine kinase/HSP90-like ATPase AF_0530 IPR011557 DNA gyrase, subunit B AF_0530 IPR034160 DNA gyrase subunit B, TOPRIM domain AF_0531 IPR035985 Ubiquitin-activating enzyme AF_0531 IPR000594 THIF-type NAD/FAD binding fold AF_0532 IPR042173 Ribonuclease J, domain 2 AF_0532 IPR030854 Ribonuclease J, bacteria AF_0532 IPR041636 Ribonuclease J, C-terminal AF_0532 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AF_0532 IPR004613 Ribonuclease J AF_0532 IPR001279 Metallo-beta-lactamase AF_0532 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_0535 IPR003008 Tubulin/FtsZ, GTPase domain AF_0535 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AF_0535 IPR024757 Cell division protein FtsZ, C-terminal AF_0535 IPR020805 Cell division protein FtsZ, conserved site AF_0535 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AF_0535 IPR008280 Tubulin/FtsZ, C-terminal AF_0535 IPR000158 Cell division protein FtsZ AF_0538 IPR020783 Ribosomal protein L11, C-terminal AF_0538 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AF_0538 IPR020785 Ribosomal protein L11, conserved site AF_0538 IPR020784 Ribosomal protein L11, N-terminal AF_0538 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AF_0538 IPR000911 Ribosomal protein L11/L12 AF_0538 IPR006519 Ribosomal protein L11, bacterial-type AF_0544 IPR009051 Alpha-helical ferredoxin AF_0544 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0544 IPR004017 Cysteine-rich domain AF_0547 IPR004017 Cysteine-rich domain AF_0547 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0547 IPR009051 Alpha-helical ferredoxin AF_0548 IPR012676 TGS-like AF_0548 IPR002320 Threonine-tRNA ligase, class IIa AF_0548 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AF_0548 IPR012675 Beta-grasp domain superfamily AF_0548 IPR036621 Anticodon-binding domain superfamily AF_0548 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AF_0548 IPR006195 Aminoacyl-tRNA synthetase, class II AF_0548 IPR004154 Anticodon-binding AF_0548 IPR004095 TGS AF_0548 IPR033728 Threonine-tRNA ligase catalytic core domain AF_0548 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AF_0550 IPR023512 Deaminase MtaD/DadD AF_0550 IPR011059 Metal-dependent hydrolase, composite domain superfamily AF_0550 IPR006680 Amidohydrolase-related AF_0550 IPR032466 Metal-dependent hydrolase AF_0551 IPR001926 Pyridoxal-phosphate dependent enzyme AF_0551 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AF_0551 IPR004450 Threonine synthase-like AF_0551 IPR026260 Threonine synthase, bacterial/archaeal AF_0551 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AF_0552 IPR003749 Sulfur carrier ThiS/MoaD-like AF_0552 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AF_0552 IPR012675 Beta-grasp domain superfamily AF_0553 IPR035985 Ubiquitin-activating enzyme AF_0553 IPR000594 THIF-type NAD/FAD binding fold AF_0556 IPR021778 Domain of unknown function DUF3343 AF_0556 IPR036868 TusA-like domain superfamily AF_0556 IPR001455 TusA-like domain AF_0557 IPR023753 FAD/NAD(P)-binding domain AF_0557 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0559 IPR004506 tRNA-specific 2-thiouridylase AF_0559 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0559 IPR023382 Adenine nucleotide alpha hydrolase-like domains AF_0564 IPR000192 Aminotransferase class V domain AF_0564 IPR016454 Cysteine desulfurase AF_0564 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AF_0564 IPR010240 Cysteine desulfurase IscS AF_0564 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal AF_0564 IPR015424 Pyridoxal phosphate-dependent transferase AF_0564 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_0564 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_0565 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AF_0568 IPR025110 AMP-binding enzyme, C-terminal domain AF_0568 IPR020845 AMP-binding, conserved site AF_0568 IPR000873 AMP-dependent synthetase/ligase AF_0568 IPR042099 AMP-dependent synthetase-like superfamily AF_0570 IPR024757 Cell division protein FtsZ, C-terminal AF_0570 IPR003008 Tubulin/FtsZ, GTPase domain AF_0570 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AF_0570 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AF_0570 IPR008280 Tubulin/FtsZ, C-terminal AF_0570 IPR000158 Cell division protein FtsZ AF_0570 IPR020805 Cell division protein FtsZ, conserved site AF_0575 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_0575 IPR001279 Metallo-beta-lactamase AF_0580 IPR037493 Exodeoxyribonuclease III-like AF_0580 IPR020847 AP endonuclease 1, binding site AF_0580 IPR020848 AP endonuclease 1, conserved site AF_0580 IPR005135 Endonuclease/exonuclease/phosphatase AF_0580 IPR004808 AP endonuclease 1 AF_0580 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AF_0581 IPR001173 Glycosyltransferase 2-like AF_0581 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase AF_0581 IPR029044 Nucleotide-diphospho-sugar transferases AF_0584 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AF_0584 IPR011008 Dimeric alpha-beta barrel AF_0584 IPR000485 AsnC-type HTH domain AF_0584 IPR011991 ArsR-like helix-turn-helix domain AF_0584 IPR019888 Transcription regulator AsnC-type AF_0584 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AF_0584 IPR036390 Winged helix DNA-binding domain superfamily AF_0584 IPR036388 Winged helix-like DNA-binding domain superfamily AF_0588 IPR036511 Queuine tRNA-ribosyltransferase-like AF_0588 IPR002616 tRNA-guanine(15) transglycosylase-like AF_0588 IPR004803 tRNA-guanine transglycosylase AF_0589 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type AF_0589 IPR005946 Ribose-phosphate pyrophosphokinase AF_0589 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AF_0589 IPR000836 Phosphoribosyltransferase domain AF_0589 IPR029057 Phosphoribosyltransferase-like AF_0589 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AF_0590 IPR013115 Histidine biosynthesis HisG, C-terminal AF_0590 IPR020621 ATP phosphoribosyltransferase HisG, long form AF_0590 IPR001348 ATP phosphoribosyltransferase HisG AF_0590 IPR018198 ATP phosphoribosyltransferase, conserved site AF_0590 IPR013820 ATP phosphoribosyltransferase, catalytic domain AF_0590 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AF_0590 IPR011322 Nitrogen regulatory PII-like, alpha/beta AF_0592 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AF_0592 IPR009000 Translation protein, beta-barrel domain superfamily AF_0592 IPR005225 Small GTP-binding protein domain AF_0592 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AF_0592 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0592 IPR004161 Translation elongation factor EFTu-like, domain 2 AF_0592 IPR033720 Elongation factor Tu, domain 2 AF_0592 IPR000795 Transcription factor, GTP-binding domain AF_0592 IPR031157 Tr-type G domain, conserved site AF_0592 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AF_0592 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AF_0596 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AF_0596 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AF_0596 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AF_0596 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_0596 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AF_0596 IPR036291 NAD(P)-binding domain superfamily AF_0596 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AF_0596 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AF_0606 IPR017814 Mycothiol biosynthesis protein, MshA AF_0606 IPR001296 Glycosyl transferase, family 1 AF_0606 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AF_0607 IPR001296 Glycosyl transferase, family 1 AF_0617 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AF_0617 IPR001296 Glycosyl transferase, family 1 AF_0617 IPR017814 Mycothiol biosynthesis protein, MshA AF_0621 IPR024567 Ribonuclease HII/HIII domain AF_0621 IPR022898 Ribonuclease HII AF_0621 IPR001352 Ribonuclease HII/HIII AF_0621 IPR036397 Ribonuclease H superfamily AF_0621 IPR012337 Ribonuclease H-like superfamily AF_0622 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AF_0622 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AF_0622 IPR003593 AAA+ ATPase domain AF_0622 IPR022941 Signal recognition particle, SRP54 subunit AF_0622 IPR036225 SRP/SRP receptor, N-terminal AF_0622 IPR004780 Signal recognition particle protein AF_0622 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AF_0622 IPR013822 Signal recognition particle SRP54, helical bundle AF_0622 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily AF_0622 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0623 IPR016059 DNA ligase, ATP-dependent, conserved site AF_0623 IPR012308 DNA ligase, ATP-dependent, N-terminal AF_0623 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily AF_0623 IPR012309 DNA ligase, ATP-dependent, C-terminal AF_0623 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal AF_0623 IPR012340 Nucleic acid-binding, OB-fold AF_0623 IPR012310 DNA ligase, ATP-dependent, central AF_0623 IPR000977 DNA ligase, ATP-dependent AF_0628 IPR024084 Isopropylmalate dehydrogenase-like domain AF_0629 IPR011827 Hydrolyase LeuD/HacB/DmdB AF_0629 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AF_0629 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AF_0629 IPR033940 3-isopropylmalate dehydratase, swivel domain AF_0632 IPR034904 Fe-S cluster assembly domain superfamily AF_0632 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal AF_0633 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AF_0633 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AF_0633 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0633 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AF_0633 IPR023586 Isoleucine-tRNA ligase, type 2 AF_0633 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AF_0633 IPR002301 Isoleucine-tRNA ligase AF_0633 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain AF_0633 IPR002300 Aminoacyl-tRNA synthetase, class Ia AF_0634 IPR036291 NAD(P)-binding domain superfamily AF_0634 IPR000846 Dihydrodipicolinate reductase, N-terminal AF_0635 IPR011852 TRAP transporter solute receptor, TAXI family AF_0638 IPR003593 AAA+ ATPase domain AF_0638 IPR003439 ABC transporter-like AF_0638 IPR017871 ABC transporter, conserved site AF_0638 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AF_0638 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0639 IPR035906 MetI-like superfamily AF_0639 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_0640 IPR003593 AAA+ ATPase domain AF_0640 IPR003439 ABC transporter-like AF_0640 IPR017871 ABC transporter, conserved site AF_0640 IPR005890 Nitrate transport ATP-binding subunit C/D AF_0640 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0646 IPR005925 Agmatinase-related AF_0646 IPR006035 Ureohydrolase AF_0646 IPR023696 Ureohydrolase domain superfamily AF_0646 IPR020855 Ureohydrolase, manganese-binding site AF_0647 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic AF_0647 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AF_0647 IPR024084 Isopropylmalate dehydrogenase-like domain AF_0654 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding AF_0654 IPR023753 FAD/NAD(P)-binding domain AF_0654 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily AF_0654 IPR006311 Twin-arginine translocation pathway, signal sequence AF_0654 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AF_0654 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AF_0654 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0655 IPR036059 Metalloprotease TldD/PmbA superfamily AF_0655 IPR025502 TldD AF_0655 IPR002510 Metalloprotease TldD/PmbA AF_0655 IPR035068 Metalloprotease TldD/PmbA, N-terminal AF_0659 IPR022399 Helicase/secretion neighbourhood ATPase AF_0659 IPR001482 Type II/IV secretion system protein AF_0659 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0660 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AF_0660 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD AF_0662 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AF_0662 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0662 IPR010960 Flavocytochrome c AF_0662 IPR029039 Flavoprotein-like superfamily AF_0662 IPR007329 FMN-binding AF_0662 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AF_0662 IPR005025 NADPH-dependent FMN reductase-like AF_0663 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0663 IPR014105 Carotenoid/retinoid oxidoreductase AF_0663 IPR002937 Amine oxidase AF_0665 IPR008271 Serine/threonine-protein kinase, active site AF_0665 IPR005543 PASTA domain AF_0665 IPR000719 Protein kinase domain AF_0665 IPR017441 Protein kinase, ATP binding site AF_0665 IPR011009 Protein kinase-like domain superfamily AF_0666 IPR036388 Winged helix-like DNA-binding domain superfamily AF_0666 IPR002852 Uncharacterised protein family UPF0251 AF_0666 IPR013324 RNA polymerase sigma factor, region 3/4-like AF_0670 IPR000453 Chorismate synthase AF_0670 IPR020541 Chorismate synthase, conserved site AF_0670 IPR035904 Chorismate synthase AroC superfamily AF_0671 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_0671 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_0671 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_0671 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_0671 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_0671 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_0671 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_0672 IPR020845 AMP-binding, conserved site AF_0672 IPR025110 AMP-binding enzyme, C-terminal domain AF_0672 IPR042099 AMP-dependent synthetase-like superfamily AF_0672 IPR000873 AMP-dependent synthetase/ligase AF_0673 IPR015358 Transcription regulator MerR, DNA binding AF_0673 IPR000551 MerR-type HTH domain AF_0673 IPR011789 Cu(I)-responsive transcriptional regulator AF_0673 IPR009061 Putative DNA-binding domain superfamily AF_0676 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0676 IPR007862 Adenylate kinase, active site lid domain AF_0676 IPR033690 Adenylate kinase, conserved site AF_0676 IPR006259 Adenylate kinase subfamily AF_0676 IPR000850 Adenylate kinase/UMP-CMP kinase AF_0677 IPR042099 AMP-dependent synthetase-like superfamily AF_0677 IPR000873 AMP-dependent synthetase/ligase AF_0677 IPR020845 AMP-binding, conserved site AF_0677 IPR025110 AMP-binding enzyme, C-terminal domain AF_0677 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AF_0677 IPR011904 Acetate-CoA ligase AF_0679 IPR038717 Tc1-like transposase, DDE domain AF_0680 IPR003439 ABC transporter-like AF_0680 IPR017871 ABC transporter, conserved site AF_0680 IPR003593 AAA+ ATPase domain AF_0680 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AF_0680 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0681 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AF_0681 IPR005884 Fumarate reductase, flavoprotein subunit AF_0681 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AF_0681 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AF_0681 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AF_0681 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0681 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AF_0681 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AF_0682 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0682 IPR036010 2Fe-2S ferredoxin-like superfamily AF_0682 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AF_0682 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0682 IPR012675 Beta-grasp domain superfamily AF_0682 IPR009051 Alpha-helical ferredoxin AF_0682 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AF_0685 IPR001753 Enoyl-CoA hydratase/isomerase AF_0685 IPR029045 ClpP/crotonase-like domain superfamily AF_0685 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AF_0685 IPR014748 Enoyl-CoA hydratase, C-terminal AF_0687 IPR020459 AMP-binding AF_0687 IPR020845 AMP-binding, conserved site AF_0687 IPR042099 AMP-dependent synthetase-like superfamily AF_0687 IPR025110 AMP-binding enzyme, C-terminal domain AF_0687 IPR000873 AMP-dependent synthetase/ligase AF_0690 IPR023696 Ureohydrolase domain superfamily AF_0690 IPR000286 Histone deacetylase family AF_0690 IPR023801 Histone deacetylase domain AF_0690 IPR037138 Histone deacetylase domain superfamily AF_0691 IPR036010 2Fe-2S ferredoxin-like superfamily AF_0691 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AF_0691 IPR001433 Oxidoreductase FAD/NAD(P)-binding AF_0691 IPR017938 Riboflavin synthase-like beta-barrel AF_0691 IPR017927 FAD-binding domain, ferredoxin reductase-type AF_0691 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F AF_0691 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AF_0691 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AF_0691 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AF_0691 IPR012675 Beta-grasp domain superfamily AF_0696 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0696 IPR025501 ATP binding protein MinD AF_0696 IPR010223 ATP binding protein MinD, bacterial-type AF_0696 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AF_0699 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AF_0699 IPR009000 Translation protein, beta-barrel domain superfamily AF_0699 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AF_0699 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AF_0699 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AF_0699 IPR002318 Alanine-tRNA ligase, class IIc AF_0699 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AF_0699 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AF_0699 IPR003156 DHHA1 domain AF_0700 IPR036393 Acetylglutamate kinase-like superfamily AF_0700 IPR036291 NAD(P)-binding domain superfamily AF_0700 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain AF_0700 IPR019811 Homoserine dehydrogenase, conserved site AF_0700 IPR018042 Aspartate kinase, conserved site AF_0700 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AF_0700 IPR001048 Aspartate/glutamate/uridylate kinase AF_0700 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I AF_0700 IPR027795 CASTOR, ACT domain AF_0700 IPR001341 Aspartate kinase AF_0700 IPR001342 Homoserine dehydrogenase, catalytic AF_0700 IPR002912 ACT domain AF_0702 IPR022828 Thiazole biosynthetic enzyme, prokaryotic AF_0702 IPR002922 Thiazole biosynthetic enzyme Thi4 family AF_0702 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0704 IPR004498 Ribosomal protein L11 methyltransferase AF_0704 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0707 IPR036424 Decaprenyl diphosphate synthase-like superfamily AF_0707 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AF_0707 IPR001441 Decaprenyl diphosphate synthase-like AF_0710 IPR006319 Phosphoenolpyruvate synthase AF_0710 IPR008279 PEP-utilising enzyme, mobile domain AF_0710 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AF_0710 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AF_0710 IPR036637 Phosphohistidine domain superfamily AF_0710 IPR023151 PEP-utilising enzyme, conserved site AF_0710 IPR000121 PEP-utilising enzyme, C-terminal AF_0710 IPR018274 PEP-utilising enzyme, active site AF_0710 IPR013815 ATP-grasp fold, subdomain 1 AF_0713 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA AF_0713 IPR006062 Histidine biosynthesis AF_0713 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AF_0713 IPR011060 Ribulose-phosphate binding barrel AF_0713 IPR013785 Aldolase-type TIM barrel AF_0724 IPR000878 Tetrapyrrole methylase AF_0724 IPR035996 Tetrapyrrole methylase superfamily AF_0724 IPR006363 Precorrin-3B C17-methyltransferase domain AF_0724 IPR014776 Tetrapyrrole methylase, subdomain 2 AF_0724 IPR014777 Tetrapyrrole methylase, subdomain 1 AF_0726 IPR000878 Tetrapyrrole methylase AF_0726 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AF_0726 IPR035996 Tetrapyrrole methylase superfamily AF_0726 IPR014777 Tetrapyrrole methylase, subdomain 1 AF_0726 IPR014776 Tetrapyrrole methylase, subdomain 2 AF_0726 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase AF_0728 IPR002751 Metal transport protein CbiM/NikMN AF_0728 IPR018024 Cobalamin (vitamin B12) transport protein CbiM AF_0731 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 AF_0731 IPR003593 AAA+ ATPase domain AF_0731 IPR003439 ABC transporter-like AF_0731 IPR017871 ABC transporter, conserved site AF_0731 IPR015856 ABC transporter, CbiO/EcfA subunit AF_0731 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0733 IPR010918 PurM-like, C-terminal domain AF_0733 IPR036676 PurM-like, C-terminal domain superfamily AF_0733 IPR016188 PurM-like, N-terminal domain AF_0733 IPR036921 PurM-like, N-terminal domain superfamily AF_0733 IPR006283 Thiamine-monophosphate kinase AF_0737 IPR012675 Beta-grasp domain superfamily AF_0737 IPR003749 Sulfur carrier ThiS/MoaD-like AF_0737 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AF_0741 IPR001602 Uncharacterised protein family UPF0047 AF_0741 IPR035917 YjbQ-like superfamily AF_0743 IPR014864 Transcription factor, NikR, nickel binding C-terminal AF_0743 IPR010985 Ribbon-helix-helix AF_0743 IPR022988 Nickel-responsive transcriptional regulator NikR AF_0743 IPR002145 Ribbon-helix-helix protein, CopG AF_0743 IPR013321 Arc-type ribbon-helix-helix AF_0743 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AF_0744 IPR004161 Translation elongation factor EFTu-like, domain 2 AF_0744 IPR033720 Elongation factor Tu, domain 2 AF_0744 IPR031157 Tr-type G domain, conserved site AF_0744 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AF_0744 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AF_0744 IPR005225 Small GTP-binding protein domain AF_0744 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AF_0744 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0744 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AF_0744 IPR000795 Transcription factor, GTP-binding domain AF_0744 IPR009000 Translation protein, beta-barrel domain superfamily AF_0745 IPR001295 Dihydroorotate dehydrogenase, conserved site AF_0745 IPR024920 Dihydroorotate dehydrogenase, class 1 AF_0745 IPR005720 Dihydroorotate dehydrogenase domain AF_0745 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 AF_0745 IPR033888 Dihydroorotate dehydrogenase, class 1B AF_0745 IPR013785 Aldolase-type TIM barrel AF_0745 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 AF_0747 IPR018510 Diaminopimelate epimerase, active site AF_0747 IPR001653 Diaminopimelate epimerase, DapF AF_0750 IPR029061 Thiamin diphosphate-binding fold AF_0750 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AF_0755 IPR023234 NarG-like domain AF_0755 IPR009051 Alpha-helical ferredoxin AF_0755 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0755 IPR036197 NarG-like superfamily AF_0755 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0755 IPR004017 Cysteine-rich domain AF_0756 IPR001667 DDH domain AF_0756 IPR038763 DHH phosphoesterase superfamily AF_0756 IPR004097 DHHA2 domain AF_0756 IPR038222 DHHA2 domain superfamily AF_0756 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable AF_0767 IPR036850 Nucleoside diphosphate kinase-like domain superfamily AF_0767 IPR001564 Nucleoside diphosphate kinase AF_0767 IPR034907 Nucleoside diphosphate kinase-like domain AF_0770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_0770 IPR005467 Histidine kinase domain AF_0770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_0770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_0770 IPR000014 PAS domain AF_0770 IPR013767 PAS fold AF_0770 IPR003594 Histidine kinase/HSP90-like ATPase AF_0770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_0770 IPR035965 PAS domain superfamily AF_0776 IPR002305 Aminoacyl-tRNA synthetase, class Ic AF_0776 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 AF_0776 IPR024088 Tyrosine-tRNA ligase, bacterial-type AF_0776 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AF_0776 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0776 IPR002942 RNA-binding S4 domain AF_0776 IPR002307 Tyrosine-tRNA ligase AF_0776 IPR036986 RNA-binding S4 domain superfamily AF_0781 IPR006070 YrdC-like domain AF_0781 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AF_0781 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily AF_0781 IPR005145 Putative GTP-binding controlling metal-binding domain AF_0781 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AF_0784 IPR018448 Twin-arginine translocation protein TatB AF_0784 IPR003369 Sec-independent protein translocase protein TatA/B/E AF_0786 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AF_0786 IPR004488 Magnesium/cobalt transport protein CorA AF_0788 IPR000620 EamA domain AF_0797 IPR013785 Aldolase-type TIM barrel AF_0797 IPR006638 Elp3/MiaB/NifB AF_0797 IPR019940 CofH family AF_0797 IPR007197 Radical SAM AF_0797 IPR034405 F420, menaquinone cofactor biosynthesis AF_0797 IPR019939 CofG family AF_0797 IPR020050 FO synthase, subunit 2 AF_0798 IPR013785 Aldolase-type TIM barrel AF_0798 IPR019940 CofH family AF_0798 IPR006638 Elp3/MiaB/NifB AF_0798 IPR034405 F420, menaquinone cofactor biosynthesis AF_0798 IPR020050 FO synthase, subunit 2 AF_0798 IPR019939 CofG family AF_0798 IPR007197 Radical SAM AF_0800 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AF_0800 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AF_0800 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AF_0800 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AF_0800 IPR002986 Diaminopimelate decarboxylase, LysA AF_0800 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AF_0800 IPR029066 PLP-binding barrel AF_0800 IPR000183 Ornithine/DAP/Arg decarboxylase AF_0806 IPR003804 L-lactate permease AF_0807 IPR013785 Aldolase-type TIM barrel AF_0807 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AF_0807 IPR000262 FMN-dependent dehydrogenase AF_0807 IPR037396 FMN hydroxy acid dehydrogenase domain AF_0807 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AF_0808 IPR036318 FAD-binding, type PCMH-like superfamily AF_0808 IPR016166 FAD-binding domain, PCMH-type AF_0808 IPR004113 FAD-linked oxidase, C-terminal AF_0808 IPR016164 FAD-linked oxidase-like, C-terminal AF_0808 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AF_0808 IPR004490 Glycolate oxidase subunit GlcD AF_0808 IPR006094 FAD linked oxidase, N-terminal AF_0811 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AF_0811 IPR022825 Lactate utilization protein B AF_0811 IPR037171 NagB/RpiA transferase-like AF_0811 IPR024569 4Fe-4S binding protein, C-terminal AF_0811 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0811 IPR004452 4Fe-4S binding protein AF_0811 IPR003741 LUD domain AF_0811 IPR009051 Alpha-helical ferredoxin AF_0811 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0813 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AF_0813 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AF_0813 IPR036291 NAD(P)-binding domain superfamily AF_0813 IPR006236 D-3-phosphoglycerate dehydrogenase AF_0813 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AF_0813 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AF_0813 IPR002912 ACT domain AF_0813 IPR029009 Allosteric substrate binding domain superfamily AF_0814 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0814 IPR004948 Nucleoside-triphosphatase, THEP1 type AF_0814 IPR003593 AAA+ ATPase domain AF_0815 IPR002905 tRNA methyltransferase, Trm1 AF_0815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0815 IPR042296 tRNA methyltransferase, Trm1, C-terminal AF_0815 IPR022923 tRNA (guanine(26)-N(2))-dimethyltransferase, archaeal and bacterial AF_0818 IPR017968 Acylphosphatase, conserved site AF_0818 IPR036046 Acylphosphatase-like domain superfamily AF_0818 IPR001792 Acylphosphatase-like domain AF_0818 IPR020456 Acylphosphatase AF_0819 IPR011060 Ribulose-phosphate binding barrel AF_0819 IPR013785 Aldolase-type TIM barrel AF_0819 IPR006062 Histidine biosynthesis AF_0819 IPR004651 Histidine biosynthesis, HisF AF_0819 IPR020021 Glycosyl amidation-associated protein, WbuZ AF_0822 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AF_0822 IPR003439 ABC transporter-like AF_0822 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0822 IPR017871 ABC transporter, conserved site AF_0822 IPR003593 AAA+ ATPase domain AF_0823 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AF_0823 IPR017871 ABC transporter, conserved site AF_0823 IPR003593 AAA+ ATPase domain AF_0823 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0823 IPR003439 ABC transporter-like AF_0825 IPR001851 ABC transporter, permease AF_0827 IPR028081 Leucine-binding protein domain AF_0827 IPR000709 Leu/Ile/Val-binding protein AF_0827 IPR028082 Periplasmic binding protein-like I AF_0830 IPR024934 Rubredoxin-like domain AF_0830 IPR024935 Rubredoxin domain AF_0830 IPR018527 Rubredoxin, iron-binding site AF_0830 IPR012349 FMN-binding split barrel AF_0830 IPR002563 Flavin reductase like domain AF_0831 IPR012347 Ferritin-like AF_0831 IPR009040 Ferritin-like diiron domain AF_0831 IPR009078 Ferritin-like superfamily AF_0831 IPR024934 Rubredoxin-like domain AF_0831 IPR003251 Rubrerythrin AF_0832 IPR009078 Ferritin-like superfamily AF_0832 IPR012347 Ferritin-like AF_0832 IPR009040 Ferritin-like diiron domain AF_0832 IPR003251 Rubrerythrin AF_0832 IPR024934 Rubredoxin-like domain AF_0833 IPR038094 Desulforodoxin domain superfamily AF_0833 IPR004793 Desulfoferrodoxin AF_0833 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily AF_0833 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain AF_0833 IPR004462 Desulforodoxin domain AF_0834 IPR008331 Ferritin/DPS protein domain AF_0834 IPR041719 Ferritin, prokaryotic-type AF_0834 IPR009040 Ferritin-like diiron domain AF_0834 IPR009078 Ferritin-like superfamily AF_0834 IPR012347 Ferritin-like AF_0834 IPR001519 Ferritin AF_0838 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AF_0838 IPR006036 Potassium uptake protein TrkA AF_0838 IPR036291 NAD(P)-binding domain superfamily AF_0838 IPR003148 Regulator of K+ conductance, N-terminal AF_0838 IPR006037 Regulator of K+ conductance, C-terminal AF_0839 IPR003445 Cation transporter AF_0839 IPR004772 TrkH potassium transport family AF_0840 IPR000873 AMP-dependent synthetase/ligase AF_0840 IPR020845 AMP-binding, conserved site AF_0840 IPR042099 AMP-dependent synthetase-like superfamily AF_0840 IPR025110 AMP-binding enzyme, C-terminal domain AF_0841 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0841 IPR018220 Adenylosuccinate synthase, GTP-binding site AF_0841 IPR033128 Adenylosuccinate synthase, active site AF_0841 IPR042109 Adenylosuccinate synthetase, domain 1 AF_0841 IPR042110 Adenylosuccinate synthetase, domain 2 AF_0841 IPR001114 Adenylosuccinate synthetase AF_0841 IPR042111 Adenylosuccinate synthetase, domain 3 AF_0845 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_0845 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_0845 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_0845 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_0845 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_0845 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_0845 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_0846 IPR018422 Cation/H+ exchanger, CPA1 family AF_0846 IPR038770 Sodium/solute symporter superfamily AF_0846 IPR006153 Cation/H+ exchanger AF_0847 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0847 IPR005892 Glycine betaine transport ATP-binding subunit AF_0847 IPR003439 ABC transporter-like AF_0847 IPR000644 CBS domain AF_0847 IPR003593 AAA+ ATPase domain AF_0847 IPR017871 ABC transporter, conserved site AF_0848 IPR000644 CBS domain AF_0851 IPR004443 YjeF N-terminal domain AF_0851 IPR036652 YjeF N-terminal domain superfamily AF_0852 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AF_0852 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_0852 IPR001085 Serine hydroxymethyltransferase AF_0852 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_0852 IPR039429 Serine hydroxymethyltransferase-like domain AF_0852 IPR015424 Pyridoxal phosphate-dependent transferase AF_0853 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AF_0853 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal AF_0853 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AF_0853 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain AF_0853 IPR011023 Nop2p AF_0853 IPR023267 RNA (C5-cytosine) methyltransferase AF_0853 IPR023545 rRNA small subunit methyltransferase F AF_0853 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_0855 IPR018177 L-lactate dehydrogenase, active site AF_0855 IPR036291 NAD(P)-binding domain superfamily AF_0855 IPR011304 L-lactate dehydrogenase AF_0855 IPR001557 L-lactate/malate dehydrogenase AF_0855 IPR022383 Lactate/malate dehydrogenase, C-terminal AF_0855 IPR001236 Lactate/malate dehydrogenase, N-terminal AF_0855 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AF_0861 IPR013785 Aldolase-type TIM barrel AF_0861 IPR041710 HPS/KGPDC domain AF_0861 IPR001754 Orotidine 5'-phosphate decarboxylase domain AF_0861 IPR017553 3-hexulose-6-phosphate synthase AF_0861 IPR011060 Ribulose-phosphate binding barrel AF_0862 IPR036025 tRNA-splicing ligase RtcB-like superfamily AF_0862 IPR001233 tRNA-splicing ligase, RtcB AF_0865 IPR029058 Alpha/Beta hydrolase fold AF_0865 IPR000073 Alpha/beta hydrolase fold-1 AF_0865 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase AF_0866 IPR000577 Carbohydrate kinase, FGGY AF_0866 IPR005999 Glycerol kinase AF_0866 IPR018483 Carbohydrate kinase, FGGY, conserved site AF_0866 IPR018485 Carbohydrate kinase, FGGY, C-terminal AF_0866 IPR018484 Carbohydrate kinase, FGGY, N-terminal AF_0868 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AF_0868 IPR006094 FAD linked oxidase, N-terminal AF_0868 IPR004490 Glycolate oxidase subunit GlcD AF_0868 IPR004113 FAD-linked oxidase, C-terminal AF_0868 IPR016164 FAD-linked oxidase-like, C-terminal AF_0868 IPR036318 FAD-binding, type PCMH-like superfamily AF_0868 IPR016166 FAD-binding domain, PCMH-type AF_0869 IPR002765 Uncharacterised protein family UPF0145 AF_0869 IPR035439 UPF0145 domain superfamily AF_0871 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AF_0871 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AF_0871 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AF_0871 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_0871 IPR036291 NAD(P)-binding domain superfamily AF_0871 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_0873 IPR035584 Amidophosphoribosyltransferase, N-terminal AF_0873 IPR000836 Phosphoribosyltransferase domain AF_0873 IPR029057 Phosphoribosyltransferase-like AF_0873 IPR005854 Amidophosphoribosyltransferase AF_0873 IPR017932 Glutamine amidotransferase type 2 domain AF_0873 IPR029055 Nucleophile aminohydrolases, N-terminal AF_0876 IPR041831 Endonuclease YhcR, metallophosphatase domain AF_0876 IPR019948 Gram-positive LPXTG cell wall anchor AF_0876 IPR029052 Metallo-dependent phosphatase-like AF_0876 IPR012340 Nucleic acid-binding, OB-fold AF_0876 IPR035437 SNase-like, OB-fold superfamily AF_0876 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AF_0876 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AF_0876 IPR006179 5'-Nucleotidase/apyrase AF_0876 IPR006146 5'-Nucleotidase, conserved site AF_0876 IPR036907 5'-Nucleotidase, C-terminal domain superfamily AF_0876 IPR008334 5'-Nucleotidase, C-terminal AF_0876 IPR019931 LPXTG cell wall anchor domain AF_0879 IPR004114 THUMP domain AF_0879 IPR020536 Thil, AANH domain AF_0879 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0879 IPR003720 tRNA sulfurtransferase ThiI AF_0880 IPR018527 Rubredoxin, iron-binding site AF_0880 IPR024934 Rubredoxin-like domain AF_0880 IPR024922 Rubredoxin AF_0880 IPR024935 Rubredoxin domain AF_0882 IPR041725 Type I (cytosolic) L-asparaginase AF_0882 IPR027474 L-asparaginase, N-terminal AF_0882 IPR037152 L-asparaginase, N-terminal domain superfamily AF_0882 IPR027475 Asparaginase/glutaminase, active site 2 AF_0882 IPR020827 Asparaginase/glutaminase, active site 1 AF_0882 IPR006034 Asparaginase/glutaminase-like AF_0882 IPR036152 Asparaginase/glutaminase-like superfamily AF_0882 IPR006033 Type I L-asparaginase family AF_0882 IPR027473 L-asparaginase, C-terminal AF_0882 IPR040919 Asparaginase/glutaminase, C-terminal AF_0885 IPR024719 HpaB/PvcC/4-BUDH C-terminal AF_0885 IPR004925 HpaB/PvcC/4-BUDH AF_0885 IPR024674 HpaB/PvcC/4-BUDH N-terminal AF_0885 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_0885 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_0886 IPR036291 NAD(P)-binding domain superfamily AF_0886 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site AF_0886 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AF_0886 IPR000043 Adenosylhomocysteinase-like AF_0886 IPR042172 Adenosylhomocysteinase-like superfamily AF_0890 IPR003760 ABC transporter substrate-binding protein PnrA-like AF_0893 IPR005467 Histidine kinase domain AF_0893 IPR029151 Periplasmic sensor-like domain superfamily AF_0893 IPR013767 PAS fold AF_0893 IPR035965 PAS domain superfamily AF_0893 IPR000014 PAS domain AF_0893 IPR033463 Single cache domain 3 AF_0893 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_0893 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_0893 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AF_0893 IPR039506 SpoOB, alpha-helical domain AF_0893 IPR003594 Histidine kinase/HSP90-like ATPase AF_0894 IPR035684 Arginyl-tRNA synthetase, catalytic core domain AF_0894 IPR001278 Arginine-tRNA ligase AF_0894 IPR005148 Arginyl tRNA synthetase N-terminal domain AF_0894 IPR008909 DALR anticodon binding AF_0894 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_0894 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AF_0894 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily AF_0894 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AF_0901 IPR002786 Inosine/xanthosine triphosphatase AF_0901 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AF_0901 IPR029001 Inosine triphosphate pyrophosphatase-like AF_0904 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AF_0904 IPR011650 Peptidase M20, dimerisation domain AF_0904 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AF_0904 IPR002933 Peptidase M20 AF_0904 IPR036264 Bacterial exopeptidase dimerisation domain AF_0907 IPR020846 Major facilitator superfamily domain AF_0907 IPR011701 Major facilitator superfamily AF_0907 IPR036259 MFS transporter superfamily AF_0907 IPR000849 Sugar phosphate transporter AF_0909 IPR022664 Dihydrodipicolinate reductase, conserved site AF_0909 IPR022663 Dihydrodipicolinate reductase, C-terminal AF_0909 IPR036291 NAD(P)-binding domain superfamily AF_0909 IPR023940 Dihydrodipicolinate reductase AF_0909 IPR000846 Dihydrodipicolinate reductase, N-terminal AF_0910 IPR020625 Schiff base-forming aldolase, active site AF_0910 IPR002220 DapA-like AF_0910 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AF_0910 IPR013785 Aldolase-type TIM barrel AF_0910 IPR020624 Schiff base-forming aldolase, conserved site AF_0914 IPR001950 SUI1 domain AF_0914 IPR005872 Archaeal/bacterial translation initiation factor SUI1 AF_0914 IPR036877 SUI1 domain superfamily AF_0916 IPR036621 Anticodon-binding domain superfamily AF_0916 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AF_0916 IPR004154 Anticodon-binding AF_0916 IPR006195 Aminoacyl-tRNA synthetase, class II AF_0916 IPR022961 Glycine-tRNA ligase, bacterial AF_0916 IPR033731 Glycyl-tRNA synthetase-like core domain AF_0916 IPR002315 Glycyl-tRNA synthetase AF_0916 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 AF_0920 IPR004523 Aspartate-tRNA synthetase, type 2 AF_0920 IPR006195 Aminoacyl-tRNA synthetase, class II AF_0920 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AF_0920 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AF_0920 IPR012340 Nucleic acid-binding, OB-fold AF_0920 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AF_0926 IPR026576 Proofreading thioesterase EntH AF_0926 IPR003736 Phenylacetic acid degradation-related domain AF_0926 IPR029069 HotDog domain superfamily AF_0926 IPR006683 Thioesterase domain AF_0928 IPR023733 Pyrophosphatase PpaX AF_0928 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AF_0928 IPR041492 Haloacid dehalogenase-like hydrolase AF_0928 IPR023214 HAD superfamily AF_0928 IPR006439 HAD hydrolase, subfamily IA AF_0928 IPR036412 HAD-like superfamily AF_0928 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AF_0929 IPR013785 Aldolase-type TIM barrel AF_0929 IPR014732 Orotidine 5'-phosphate decarboxylase AF_0929 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AF_0929 IPR001754 Orotidine 5'-phosphate decarboxylase domain AF_0929 IPR011060 Ribulose-phosphate binding barrel AF_0930 IPR036425 MoaB/Mog-like domain superfamily AF_0930 IPR036688 MoeA, C-terminal, domain IV superfamily AF_0930 IPR038987 Molybdopterin biosynthesis protein MoeA-like AF_0930 IPR005111 MoeA, C-terminal, domain IV AF_0930 IPR005110 MoeA, N-terminal and linker domain AF_0930 IPR036135 MoeA, N-terminal and linker domain superfamily AF_0930 IPR001453 MoaB/Mog domain AF_0931 IPR005111 MoeA, C-terminal, domain IV AF_0931 IPR036688 MoeA, C-terminal, domain IV superfamily AF_0931 IPR005110 MoeA, N-terminal and linker domain AF_0931 IPR036135 MoeA, N-terminal and linker domain superfamily AF_0931 IPR001453 MoaB/Mog domain AF_0931 IPR036425 MoaB/Mog-like domain superfamily AF_0931 IPR038987 Molybdopterin biosynthesis protein MoeA-like AF_0931 IPR008284 Molybdenum cofactor biosynthesis, conserved site AF_0932 IPR016102 Succinyl-CoA synthetase-like AF_0932 IPR016181 Acyl-CoA N-acyltransferase AF_0932 IPR011761 ATP-grasp fold AF_0932 IPR013815 ATP-grasp fold, subdomain 1 AF_0932 IPR003781 CoA-binding AF_0932 IPR000182 GNAT domain AF_0932 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AF_0932 IPR036291 NAD(P)-binding domain superfamily AF_0933 IPR001544 Aminotransferase class IV AF_0933 IPR018300 Aminotransferase, class IV, conserved site AF_0933 IPR036038 Aminotransferase-like, PLP-dependent enzymes AF_0933 IPR005785 Branched-chain amino acid aminotransferase I AF_0933 IPR033939 Branched-chain aminotransferase AF_0935 IPR036291 NAD(P)-binding domain superfamily AF_0935 IPR002912 ACT domain AF_0935 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AF_0935 IPR016204 Homoserine dehydrogenase AF_0935 IPR001342 Homoserine dehydrogenase, catalytic AF_0935 IPR019811 Homoserine dehydrogenase, conserved site AF_0937 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AF_0937 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AF_0937 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AF_0937 IPR009000 Translation protein, beta-barrel domain superfamily AF_0937 IPR031157 Tr-type G domain, conserved site AF_0937 IPR000795 Transcription factor, GTP-binding domain AF_0937 IPR005225 Small GTP-binding protein domain AF_0937 IPR033720 Elongation factor Tu, domain 2 AF_0937 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0937 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AF_0937 IPR004161 Translation elongation factor EFTu-like, domain 2 AF_0938 IPR018268 Ribosomal protein S10, conserved site AF_0938 IPR027486 Ribosomal protein S10 domain AF_0938 IPR036838 Ribosomal protein S10 domain superfamily AF_0938 IPR001848 Ribosomal protein S10 AF_0939 IPR013471 Ribonuclease Z/BN AF_0939 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_0939 IPR001279 Metallo-beta-lactamase AF_0942 IPR030048 Survival protein SurE AF_0942 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AF_0942 IPR036523 SurE-like phosphatase/nucleotidase superfamily AF_0943 IPR037171 NagB/RpiA transferase-like AF_0943 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup AF_0943 IPR004788 Ribose 5-phosphate isomerase, type A AF_0949 IPR008146 Glutamine synthetase, catalytic domain AF_0949 IPR004809 Glutamine synthetase type I AF_0949 IPR036651 Glutamine synthetase, N-terminal domain superfamily AF_0949 IPR008147 Glutamine synthetase, beta-Grasp domain AF_0949 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AF_0950 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0950 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0951 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal AF_0951 IPR017121 Nitrite reductase [NAD(P)H], large subunit AF_0951 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AF_0951 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AF_0951 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AF_0951 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AF_0951 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AF_0951 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AF_0951 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AF_0951 IPR023753 FAD/NAD(P)-binding domain AF_0951 IPR036188 FAD/NAD(P)-binding domain superfamily AF_0951 IPR007419 BFD-like [2Fe-2S]-binding domain AF_0952 IPR029055 Nucleophile aminohydrolases, N-terminal AF_0952 IPR012375 Glutamate synthase large subunit domain 1 stand-alone protein AF_0952 IPR017932 Glutamine amidotransferase type 2 domain AF_0953 IPR024188 Glutamate synthase large subunit-like protein AF_0953 IPR002932 Glutamate synthase domain AF_0953 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_0953 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_0953 IPR013785 Aldolase-type TIM barrel AF_0957 IPR000891 Pyruvate carboxyltransferase AF_0957 IPR005671 2-isopropylmalate synthase, bacterial-type AF_0957 IPR013785 Aldolase-type TIM barrel AF_0957 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AF_0957 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AF_0957 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AF_0958 IPR017871 ABC transporter, conserved site AF_0958 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0958 IPR003593 AAA+ ATPase domain AF_0958 IPR003439 ABC transporter-like AF_0959 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0959 IPR003593 AAA+ ATPase domain AF_0959 IPR003439 ABC transporter-like AF_0959 IPR017871 ABC transporter, conserved site AF_0959 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AF_0959 IPR030921 LPS export ABC transporter, ATP-binding protein LptB AF_0960 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AF_0960 IPR001851 ABC transporter, permease AF_0963 IPR029045 ClpP/crotonase-like domain superfamily AF_0963 IPR014748 Enoyl-CoA hydratase, C-terminal AF_0963 IPR001753 Enoyl-CoA hydratase/isomerase AF_0963 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AF_0964 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_0964 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_0964 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_0964 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_0964 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_0964 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_0969 IPR018212 Sodium/solute symporter, conserved site AF_0969 IPR001734 Sodium/solute symporter AF_0969 IPR038377 Sodium/glucose symporter superfamily AF_0969 IPR014083 Cation/acetate symporter ActP AF_0972 IPR013520 Exonuclease, RNase T/DNA polymerase III AF_0972 IPR036397 Ribonuclease H superfamily AF_0972 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain AF_0972 IPR012337 Ribonuclease H-like superfamily AF_0973 IPR023606 CoA-transferase family III domain superfamily AF_0973 IPR003673 CoA-transferase family III AF_0974 IPR023606 CoA-transferase family III domain superfamily AF_0974 IPR003673 CoA-transferase family III AF_0975 IPR000873 AMP-dependent synthetase/ligase AF_0975 IPR020845 AMP-binding, conserved site AF_0975 IPR025110 AMP-binding enzyme, C-terminal domain AF_0975 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AF_0975 IPR011904 Acetate-CoA ligase AF_0975 IPR042099 AMP-dependent synthetase-like superfamily AF_0976 IPR025110 AMP-binding enzyme, C-terminal domain AF_0976 IPR020845 AMP-binding, conserved site AF_0976 IPR042099 AMP-dependent synthetase-like superfamily AF_0976 IPR000873 AMP-dependent synthetase/ligase AF_0977 IPR024041 Ammonium transporter AmtB-like domain AF_0977 IPR018047 Ammonium transporter, conserved site AF_0977 IPR001905 Ammonium transporter AF_0977 IPR029020 Ammonium/urea transporter AF_0978 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AF_0978 IPR011322 Nitrogen regulatory PII-like, alpha/beta AF_0978 IPR002187 Nitrogen regulatory protein PII AF_0978 IPR002332 Nitrogen regulatory protein P-II, urydylation site AF_0978 IPR017918 Nitrogen regulatory protein PII, conserved site AF_0979 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_0979 IPR035906 MetI-like superfamily AF_0980 IPR035906 MetI-like superfamily AF_0980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_0981 IPR003593 AAA+ ATPase domain AF_0981 IPR017871 ABC transporter, conserved site AF_0981 IPR000644 CBS domain AF_0981 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0981 IPR005892 Glycine betaine transport ATP-binding subunit AF_0981 IPR003439 ABC transporter-like AF_0982 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain AF_0984 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0984 IPR017871 ABC transporter, conserved site AF_0984 IPR003439 ABC transporter-like AF_0984 IPR003593 AAA+ ATPase domain AF_0985 IPR036412 HAD-like superfamily AF_0985 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AF_0985 IPR023214 HAD superfamily AF_0985 IPR020566 Histidine biosynthesis bifunctional protein HisB AF_0985 IPR005954 Histidinol-phosphatase AF_0985 IPR006543 Histidinol-phosphate phosphatase AF_0985 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily AF_0985 IPR000807 Imidazoleglycerol-phosphate dehydratase AF_0985 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AF_0985 IPR020568 Ribosomal protein S5 domain 2-type fold AF_0986 IPR013785 Aldolase-type TIM barrel AF_0986 IPR011060 Ribulose-phosphate binding barrel AF_0986 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AF_0986 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA AF_0986 IPR006062 Histidine biosynthesis AF_0990 IPR023606 CoA-transferase family III domain superfamily AF_0990 IPR003673 CoA-transferase family III AF_0991 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_0991 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_0991 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_0991 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_0991 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_0991 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_0991 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_0994 IPR006674 HD domain AF_0994 IPR003607 HD/PDEase domain AF_0996 IPR001482 Type II/IV secretion system protein AF_0996 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_0996 IPR022399 Helicase/secretion neighbourhood ATPase AF_0997 IPR023512 Deaminase MtaD/DadD AF_0997 IPR011059 Metal-dependent hydrolase, composite domain superfamily AF_0997 IPR032466 Metal-dependent hydrolase AF_0997 IPR006680 Amidohydrolase-related AF_1000 IPR022926 NH(3)-dependent NAD(+) synthetase AF_1000 IPR003694 NAD(+) synthetase AF_1000 IPR022310 NAD/GMP synthase AF_1000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1005 IPR000412 ABC-2 transporter AF_1006 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1006 IPR017871 ABC transporter, conserved site AF_1006 IPR003439 ABC transporter-like AF_1006 IPR003593 AAA+ ATPase domain AF_1009 IPR036390 Winged helix DNA-binding domain superfamily AF_1009 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1009 IPR002831 Transcription regulator TrmB, N-terminal AF_1009 IPR021586 Transcription regulator TrmB, C-terminal AF_1014 IPR042096 Dihydroxy-acid dehydratase, C-terminal AF_1014 IPR004404 Dihydroxy-acid dehydratase AF_1014 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AF_1014 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AF_1014 IPR037237 IlvD/EDD, N-terminal domain AF_1017 IPR025857 MacB-like periplasmic core domain AF_1017 IPR005085 Carbohydrate binding module family 25 AF_1017 IPR003838 ABC transporter permease protein domain AF_1018 IPR003593 AAA+ ATPase domain AF_1018 IPR003439 ABC transporter-like AF_1018 IPR017871 ABC transporter, conserved site AF_1018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1021 IPR003439 ABC transporter-like AF_1021 IPR003593 AAA+ ATPase domain AF_1021 IPR017871 ABC transporter, conserved site AF_1021 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1021 IPR005978 Nodulation ABC transporter, NodI AF_1021 IPR015851 ABC transporter, NodI AF_1022 IPR036390 Winged helix DNA-binding domain superfamily AF_1022 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1022 IPR000847 Transcription regulator HTH, LysR AF_1022 IPR005116 Transport-associated OB, type 1 AF_1022 IPR004606 Molybdenum-pterin binding AF_1022 IPR003725 Molybdenum-binding protein ModE, N-terminal AF_1022 IPR016462 Molybdate-dependent transcriptional regulator ModE AF_1022 IPR008995 Molybdate/tungstate binding, C-terminal AF_1023 IPR011777 Geranylgeranyl reductase family AF_1023 IPR036188 FAD/NAD(P)-binding domain superfamily AF_1023 IPR010253 Geranylgeranyl reductase, plant/prokaryotic AF_1024 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_1024 IPR006171 TOPRIM domain AF_1024 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AF_1024 IPR023405 DNA topoisomerase, type IA, core domain AF_1024 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AF_1024 IPR001650 Helicase, C-terminal AF_1024 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1024 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AF_1024 IPR013497 DNA topoisomerase, type IA, central AF_1024 IPR040569 Reverse gyrase, zinc finger AF_1024 IPR034142 Reverse gyrase, TOPRIM domain AF_1024 IPR005736 Reverse gyrase AF_1024 IPR003593 AAA+ ATPase domain AF_1024 IPR011545 DEAD/DEAH box helicase domain AF_1024 IPR003601 DNA topoisomerase, type IA, domain 2 AF_1025 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_1025 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_1025 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_1025 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_1025 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_1025 IPR022694 3-hydroxyacyl-CoA dehydrogenase AF_1025 IPR036291 NAD(P)-binding domain superfamily AF_1026 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_1026 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_1026 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_1026 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_1026 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_1026 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_1026 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_1027 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_1027 IPR024674 HpaB/PvcC/4-BUDH N-terminal AF_1027 IPR024719 HpaB/PvcC/4-BUDH C-terminal AF_1027 IPR004925 HpaB/PvcC/4-BUDH AF_1027 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_1028 IPR002155 Thiolase AF_1028 IPR020616 Thiolase, N-terminal AF_1028 IPR020613 Thiolase, conserved site AF_1028 IPR020617 Thiolase, C-terminal AF_1028 IPR012805 Acetyl-CoA C-acyltransferase FadA AF_1028 IPR020610 Thiolase, active site AF_1028 IPR020615 Thiolase, acyl-enzyme intermediate active site AF_1028 IPR016039 Thiolase-like AF_1029 IPR042099 AMP-dependent synthetase-like superfamily AF_1029 IPR020845 AMP-binding, conserved site AF_1029 IPR025110 AMP-binding enzyme, C-terminal domain AF_1029 IPR000873 AMP-dependent synthetase/ligase AF_1030 IPR008571 Helicase HerA-like AF_1030 IPR018538 Helicase HerA, barrel domain AF_1030 IPR002789 Helicase HerA, central domain AF_1030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1034 IPR033463 Single cache domain 3 AF_1034 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AF_1034 IPR004090 Chemotaxis methyl-accepting receptor AF_1034 IPR029151 Periplasmic sensor-like domain superfamily AF_1034 IPR003660 HAMP domain AF_1037 IPR026024 Chemotaxis protein methyltransferase CheR AF_1037 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AF_1037 IPR000780 MCP methyltransferase, CheR-type AF_1037 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AF_1037 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AF_1037 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_1038 IPR005659 Chemoreceptor glutamine deamidase CheD AF_1038 IPR038592 CheD-like superfamily AF_1038 IPR011324 Cytotoxic necrotizing factor-like, catalytic AF_1039 IPR007597 CheC-like protein AF_1039 IPR028976 CheC-like superfamily AF_1040 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AF_1040 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_1040 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily AF_1040 IPR005467 Histidine kinase domain AF_1040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_1040 IPR036641 HPT domain superfamily AF_1040 IPR035891 CheY-binding domain of CheA AF_1040 IPR002545 CheW-like domain AF_1040 IPR036061 CheW-like domain superfamily AF_1040 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding AF_1040 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily AF_1040 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_1040 IPR004105 Histidine kinase CheA-like, homodimeric domain AF_1040 IPR003594 Histidine kinase/HSP90-like ATPase AF_1041 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AF_1041 IPR035909 Methylesterase CheB, C-terminal AF_1041 IPR011006 CheY-like superfamily AF_1041 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AF_1041 IPR001789 Signal transduction response regulator, receiver domain AF_1042 IPR011006 CheY-like superfamily AF_1042 IPR001789 Signal transduction response regulator, receiver domain AF_1044 IPR039315 Chemotaxis protein CheW AF_1044 IPR036061 CheW-like domain superfamily AF_1044 IPR002545 CheW-like domain AF_1045 IPR004090 Chemotaxis methyl-accepting receptor AF_1045 IPR003660 HAMP domain AF_1045 IPR029151 Periplasmic sensor-like domain superfamily AF_1045 IPR033463 Single cache domain 3 AF_1045 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AF_1049 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1049 IPR001482 Type II/IV secretion system protein AF_1049 IPR022399 Helicase/secretion neighbourhood ATPase AF_1063 IPR011006 CheY-like superfamily AF_1063 IPR001789 Signal transduction response regulator, receiver domain AF_1064 IPR017882 Zinc import ATP-binding protein ZnuC AF_1064 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1064 IPR017871 ABC transporter, conserved site AF_1064 IPR003439 ABC transporter-like AF_1064 IPR003593 AAA+ ATPase domain AF_1066 IPR036661 Luciferase-like domain superfamily AF_1066 IPR011251 Luciferase-like domain AF_1069 IPR001734 Sodium/solute symporter AF_1069 IPR018212 Sodium/solute symporter, conserved site AF_1069 IPR038377 Sodium/glucose symporter superfamily AF_1069 IPR011849 Sodium/pantothenate symporter AF_1070 IPR000873 AMP-dependent synthetase/ligase AF_1070 IPR011880 Phenylacetate-CoA ligase AF_1070 IPR028154 AMP-dependent ligase, C-terminal AF_1070 IPR042099 AMP-dependent synthetase-like superfamily AF_1072 IPR035069 TTHA1013/TTHA0281-like AF_1072 IPR031807 HicB-like antitoxin of toxin-antitoxin system AF_1097 IPR029044 Nucleotide-diphospho-sugar transferases AF_1097 IPR005835 Nucleotidyl transferase domain AF_1097 IPR014710 RmlC-like jelly roll fold AF_1097 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AF_1097 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal AF_1097 IPR011051 RmlC-like cupin domain superfamily AF_1098 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily AF_1098 IPR011167 Iron-dependent fumarate hydratase AF_1098 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AF_1098 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AF_1107 IPR036104 Bifunctional nuclease superfamily AF_1107 IPR003729 Bifunctional nuclease domain AF_1112 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AF_1112 IPR017861 Kae1/TsaD family AF_1112 IPR000905 Gcp-like domain AF_1117 IPR022967 RNA-binding domain, S1 AF_1117 IPR020568 Ribosomal protein S5 domain 2-type fold AF_1117 IPR036345 Exoribonuclease, PH domain 2 superfamily AF_1117 IPR004087 K Homology domain AF_1117 IPR004088 K Homology domain, type 1 AF_1117 IPR001247 Exoribonuclease, phosphorolytic domain 1 AF_1117 IPR012340 Nucleic acid-binding, OB-fold AF_1117 IPR036612 K Homology domain, type 1 superfamily AF_1117 IPR012162 Polyribonucleotide nucleotidyltransferase AF_1117 IPR027408 PNPase/RNase PH domain superfamily AF_1117 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AF_1117 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily AF_1117 IPR003029 S1 domain AF_1117 IPR015847 Exoribonuclease, phosphorolytic domain 2 AF_1122 IPR022694 3-hydroxyacyl-CoA dehydrogenase AF_1122 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_1122 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_1122 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_1122 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_1122 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_1122 IPR036291 NAD(P)-binding domain superfamily AF_1125 IPR023885 4Fe4S-binding SPASM domain AF_1125 IPR006638 Elp3/MiaB/NifB AF_1125 IPR013785 Aldolase-type TIM barrel AF_1125 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AF_1125 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria AF_1125 IPR017200 Coenzyme PQQ synthesis protein E AF_1125 IPR007197 Radical SAM AF_1128 IPR005822 Ribosomal protein L13 AF_1128 IPR005823 Ribosomal protein L13, bacterial-type AF_1128 IPR023563 Ribosomal protein L13, conserved site AF_1128 IPR036899 Ribosomal protein L13 superfamily AF_1129 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_1129 IPR023035 Ribosomal protein S9, bacterial/plastid AF_1129 IPR020574 Ribosomal protein S9, conserved site AF_1129 IPR000754 Ribosomal protein S9 AF_1129 IPR020568 Ribosomal protein S5 domain 2-type fold AF_1132 IPR036849 Enolase-like, C-terminal domain superfamily AF_1132 IPR000941 Enolase AF_1132 IPR020809 Enolase, conserved site AF_1132 IPR029017 Enolase-like, N-terminal AF_1132 IPR020811 Enolase, N-terminal AF_1132 IPR020810 Enolase, C-terminal TIM barrel domain AF_1133 IPR001865 Ribosomal protein S2 AF_1133 IPR018130 Ribosomal protein S2, conserved site AF_1133 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AF_1133 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AF_1136 IPR003439 ABC transporter-like AF_1136 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1136 IPR003593 AAA+ ATPase domain AF_1136 IPR017871 ABC transporter, conserved site AF_1139 IPR017871 ABC transporter, conserved site AF_1139 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1139 IPR003439 ABC transporter-like AF_1139 IPR003593 AAA+ ATPase domain AF_1142 IPR029044 Nucleotide-diphospho-sugar transferases AF_1142 IPR005835 Nucleotidyl transferase domain AF_1144 IPR020846 Major facilitator superfamily domain AF_1144 IPR004638 Drug resistance transporter EmrB-like AF_1144 IPR036259 MFS transporter superfamily AF_1144 IPR005829 Sugar transporter, conserved site AF_1144 IPR011701 Major facilitator superfamily AF_1145 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AF_1145 IPR003702 Acetyl-CoA hydrolase/transferase AF_1145 IPR023990 Butyryl-CoA:acetate CoA-transferase AF_1145 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily AF_1145 IPR037171 NagB/RpiA transferase-like AF_1146 IPR015911 Phosphoglycerate kinase, conserved site AF_1146 IPR015824 Phosphoglycerate kinase, N-terminal AF_1146 IPR036043 Phosphoglycerate kinase superfamily AF_1146 IPR001576 Phosphoglycerate kinase AF_1147 IPR042195 ArgJ beta chain, C-terminal domain AF_1147 IPR002813 Arginine biosynthesis protein ArgJ AF_1147 IPR016117 ArgJ-like domain superfamily AF_1148 IPR036390 Winged helix DNA-binding domain superfamily AF_1148 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AF_1148 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AF_1148 IPR019888 Transcription regulator AsnC-type AF_1148 IPR011008 Dimeric alpha-beta barrel AF_1148 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1148 IPR000485 AsnC-type HTH domain AF_1149 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1149 IPR001650 Helicase, C-terminal AF_1149 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_1149 IPR011545 DEAD/DEAH box helicase domain AF_1149 IPR003593 AAA+ ATPase domain AF_1149 IPR013701 DEAD/H associated AF_1157 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily AF_1157 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AF_1157 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AF_1157 IPR000115 Phosphoribosylglycinamide synthetase AF_1157 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AF_1157 IPR011054 Rudiment single hybrid motif AF_1157 IPR016185 Pre-ATP-grasp domain superfamily AF_1157 IPR013815 ATP-grasp fold, subdomain 1 AF_1157 IPR020559 Phosphoribosylglycinamide synthetase, conserved site AF_1157 IPR011761 ATP-grasp fold AF_1159 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family AF_1164 IPR035067 V-type ATPase subunit c AF_1164 IPR002843 ATPase, V0 complex, c/d subunit AF_1164 IPR014272 ATPase, V0 complex, c subunit AF_1164 IPR036079 V-type ATP synthase subunit C-like AF_1166 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1166 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal AF_1166 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AF_1166 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AF_1166 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension AF_1166 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AF_1166 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AF_1166 IPR022878 V-type ATP synthase catalytic alpha chain AF_1166 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AF_1167 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AF_1167 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1167 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AF_1167 IPR022879 V-type ATP synthase regulatory subunit B/beta AF_1167 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AF_1168 IPR002699 ATPase, V1 complex, subunit D AF_1169 IPR003784 BioY protein AF_1170 IPR003593 AAA+ ATPase domain AF_1170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1170 IPR022216 Putative ABC cobalt transporter AF_1170 IPR017871 ABC transporter, conserved site AF_1170 IPR003439 ABC transporter-like AF_1175 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_1175 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_1175 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_1175 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_1175 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_1175 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_1175 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_1177 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_1177 IPR022694 3-hydroxyacyl-CoA dehydrogenase AF_1177 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_1177 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_1177 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_1177 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_1177 IPR036291 NAD(P)-binding domain superfamily AF_1184 IPR003594 Histidine kinase/HSP90-like ATPase AF_1184 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_1184 IPR005467 Histidine kinase domain AF_1184 IPR000700 PAS-associated, C-terminal AF_1184 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_1184 IPR035965 PAS domain superfamily AF_1184 IPR013767 PAS fold AF_1184 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_1184 IPR001610 PAC motif AF_1184 IPR000014 PAS domain AF_1184 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_1186 IPR005990 Inosine-5'-monophosphate dehydrogenase AF_1186 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AF_1186 IPR000644 CBS domain AF_1186 IPR001093 IMP dehydrogenase/GMP reductase AF_1186 IPR013785 Aldolase-type TIM barrel AF_1190 IPR022694 3-hydroxyacyl-CoA dehydrogenase AF_1190 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_1190 IPR036291 NAD(P)-binding domain superfamily AF_1190 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_1190 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_1190 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_1190 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_1191 IPR014748 Enoyl-CoA hydratase, C-terminal AF_1191 IPR001753 Enoyl-CoA hydratase/isomerase AF_1191 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AF_1191 IPR029045 ClpP/crotonase-like domain superfamily AF_1191 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB AF_1192 IPR000182 GNAT domain AF_1192 IPR003781 CoA-binding AF_1192 IPR013815 ATP-grasp fold, subdomain 1 AF_1192 IPR011761 ATP-grasp fold AF_1192 IPR016181 Acyl-CoA N-acyltransferase AF_1192 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AF_1192 IPR036291 NAD(P)-binding domain superfamily AF_1192 IPR016102 Succinyl-CoA synthetase-like AF_1195 IPR008824 RuvB-like P-loop domain AF_1195 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AF_1195 IPR032423 AAA C-terminal domain AF_1195 IPR021886 MgsA AAA+ ATPase C-terminal AF_1195 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1195 IPR003593 AAA+ ATPase domain AF_1196 IPR011251 Luciferase-like domain AF_1196 IPR036661 Luciferase-like domain superfamily AF_1197 IPR002155 Thiolase AF_1197 IPR016039 Thiolase-like AF_1197 IPR020615 Thiolase, acyl-enzyme intermediate active site AF_1197 IPR020610 Thiolase, active site AF_1197 IPR020617 Thiolase, C-terminal AF_1197 IPR020613 Thiolase, conserved site AF_1197 IPR020616 Thiolase, N-terminal AF_1199 IPR037171 NagB/RpiA transferase-like AF_1199 IPR004165 Coenzyme A transferase family I AF_1202 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_1202 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_1203 IPR041930 Acetylene hydratase AF_1203 IPR009010 Aspartate decarboxylase-like domain superfamily AF_1203 IPR037949 Acetylene hydratase, MopB domain AF_1203 IPR006657 Molybdopterin dinucleotide-binding domain AF_1203 IPR006656 Molybdopterin oxidoreductase AF_1206 IPR026578 L-carnitine dehydrogenase AF_1206 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_1206 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_1206 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_1206 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_1206 IPR036291 NAD(P)-binding domain superfamily AF_1207 IPR002347 Short-chain dehydrogenase/reductase SDR AF_1207 IPR020904 Short-chain dehydrogenase/reductase, conserved site AF_1207 IPR036291 NAD(P)-binding domain superfamily AF_1210 IPR008567 3-keto-5-aminohexanoate cleavage enzyme AF_1210 IPR013785 Aldolase-type TIM barrel AF_1211 IPR016102 Succinyl-CoA synthetase-like AF_1211 IPR016181 Acyl-CoA N-acyltransferase AF_1211 IPR013815 ATP-grasp fold, subdomain 1 AF_1211 IPR003781 CoA-binding AF_1211 IPR011761 ATP-grasp fold AF_1211 IPR036291 NAD(P)-binding domain superfamily AF_1211 IPR000182 GNAT domain AF_1211 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AF_1212 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1212 IPR010766 DRTGG AF_1212 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AF_1214 IPR036551 Flavin prenyltransferase-like AF_1214 IPR003382 Flavoprotein AF_1214 IPR004507 Flavin prenyltransferase UbiX-like AF_1215 IPR008280 Tubulin/FtsZ, C-terminal AF_1215 IPR024757 Cell division protein FtsZ, C-terminal AF_1215 IPR020805 Cell division protein FtsZ, conserved site AF_1215 IPR000158 Cell division protein FtsZ AF_1215 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily AF_1215 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AF_1215 IPR003008 Tubulin/FtsZ, GTPase domain AF_1215 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AF_1216 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AF_1216 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 AF_1216 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1216 IPR023386 Lysine-tRNA ligase, insertion domain superfamily AF_1216 IPR042078 Lysine tRNA ligase, stem contact fold domain AF_1216 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AF_1216 IPR002904 Lysine-tRNA ligase AF_1219 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AF_1219 IPR036424 Decaprenyl diphosphate synthase-like superfamily AF_1219 IPR001441 Decaprenyl diphosphate synthase-like AF_1222 IPR001734 Sodium/solute symporter AF_1222 IPR038377 Sodium/glucose symporter superfamily AF_1222 IPR018212 Sodium/solute symporter, conserved site AF_1222 IPR014083 Cation/acetate symporter ActP AF_1224 IPR006675 HDIG domain AF_1224 IPR004087 K Homology domain AF_1224 IPR004088 K Homology domain, type 1 AF_1224 IPR036612 K Homology domain, type 1 superfamily AF_1224 IPR006674 HD domain AF_1224 IPR017705 Ribonuclease Y AF_1224 IPR022711 Ribonuclease Y, N-terminal AF_1224 IPR003607 HD/PDEase domain AF_1229 IPR000731 Sterol-sensing domain AF_1229 IPR004869 Membrane transport protein MMPL domain AF_1229 IPR023845 Domain of unknown function DUF3817, transmembrane AF_1232 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1232 IPR021586 Transcription regulator TrmB, C-terminal AF_1232 IPR036390 Winged helix DNA-binding domain superfamily AF_1232 IPR002831 Transcription regulator TrmB, N-terminal AF_1234 IPR023214 HAD superfamily AF_1234 IPR000086 NUDIX hydrolase domain AF_1234 IPR020476 NUDIX hydrolase AF_1234 IPR006357 HAD-superfamily hydrolase, subfamily IIA AF_1234 IPR015797 NUDIX hydrolase-like domain superfamily AF_1234 IPR020084 NUDIX hydrolase, conserved site AF_1234 IPR036412 HAD-like superfamily AF_1238 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AF_1238 IPR023753 FAD/NAD(P)-binding domain AF_1238 IPR036188 FAD/NAD(P)-binding domain superfamily AF_1238 IPR013785 Aldolase-type TIM barrel AF_1240 IPR006654 Tryptophan synthase, beta chain AF_1240 IPR006316 Tryptophan synthase, beta chain-like AF_1240 IPR006653 Tryptophan synthase, beta chain, conserved site AF_1240 IPR023026 Tryptophan synthase beta chain/beta chain-like AF_1240 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AF_1240 IPR001926 Pyridoxal-phosphate dependent enzyme AF_1241 IPR005814 Aminotransferase class-III AF_1241 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AF_1241 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_1241 IPR015424 Pyridoxal phosphate-dependent transferase AF_1241 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_1242 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily AF_1242 IPR000860 Porphobilinogen deaminase AF_1242 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AF_1242 IPR022418 Porphobilinogen deaminase, C-terminal AF_1242 IPR022417 Porphobilinogen deaminase, N-terminal AF_1243 IPR000878 Tetrapyrrole methylase AF_1243 IPR035996 Tetrapyrrole methylase superfamily AF_1243 IPR014777 Tetrapyrrole methylase, subdomain 1 AF_1243 IPR014776 Tetrapyrrole methylase, subdomain 2 AF_1243 IPR006366 Uroporphyrin-III C-methyltransferase AF_1243 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AF_1245 IPR006153 Cation/H+ exchanger AF_1245 IPR038770 Sodium/solute symporter superfamily AF_1247 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB AF_1247 IPR038135 Methylthiotransferase, N-terminal domain superfamily AF_1247 IPR002792 TRAM domain AF_1247 IPR007197 Radical SAM AF_1247 IPR023404 Radical SAM, alpha/beta horseshoe AF_1247 IPR020612 Methylthiotransferase, conserved site AF_1247 IPR005839 Methylthiotransferase AF_1247 IPR013848 Methylthiotransferase, N-terminal AF_1247 IPR006638 Elp3/MiaB/NifB AF_1248 IPR007563 Protein of unknown function DUF554 AF_1252 IPR003379 Carboxylase, conserved domain AF_1252 IPR000089 Biotin/lipoyl attachment AF_1252 IPR001882 Biotin-binding site AF_1252 IPR013785 Aldolase-type TIM barrel AF_1252 IPR005776 Oxaloacetate decarboxylase, alpha subunit AF_1252 IPR000891 Pyruvate carboxyltransferase AF_1252 IPR011053 Single hybrid motif AF_1255 IPR006130 Aspartate/ornithine carbamoyltransferase AF_1255 IPR024904 Ornithine carbamoyltransferase AF_1255 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AF_1255 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AF_1255 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AF_1255 IPR002292 Ornithine/putrescine carbamoyltransferase AF_1256 IPR001789 Signal transduction response regulator, receiver domain AF_1256 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AF_1256 IPR035909 Methylesterase CheB, C-terminal AF_1256 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AF_1256 IPR011006 CheY-like superfamily AF_1257 IPR004114 THUMP domain AF_1257 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_1257 IPR000241 Putative RNA methylase domain AF_1257 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AF_1259 IPR017871 ABC transporter, conserved site AF_1259 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1259 IPR003439 ABC transporter-like AF_1259 IPR000644 CBS domain AF_1259 IPR005892 Glycine betaine transport ATP-binding subunit AF_1259 IPR003593 AAA+ ATPase domain AF_1260 IPR029062 Class I glutamine amidotransferase-like AF_1260 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ AF_1260 IPR017926 Glutamine amidotransferase AF_1261 IPR000873 AMP-dependent synthetase/ligase AF_1261 IPR042099 AMP-dependent synthetase-like superfamily AF_1261 IPR025110 AMP-binding enzyme, C-terminal domain AF_1261 IPR020845 AMP-binding, conserved site AF_1262 IPR013785 Aldolase-type TIM barrel AF_1262 IPR023753 FAD/NAD(P)-binding domain AF_1262 IPR036188 FAD/NAD(P)-binding domain superfamily AF_1262 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AF_1265 IPR001279 Metallo-beta-lactamase AF_1265 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_1265 IPR022877 Protein of unknown funcion UPF0173 AF_1271 IPR035893 PurE domain superfamily AF_1271 IPR024694 PurE, prokaryotic type AF_1271 IPR000031 PurE domain AF_1271 IPR033626 Class II PurE AF_1272 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase AF_1272 IPR018236 SAICAR synthetase, conserved site AF_1272 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase AF_1272 IPR028923 SAICAR synthetase/ADE2, N-terminal AF_1273 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AF_1273 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AF_1273 IPR006274 Carbamoyl-phosphate synthase, small subunit AF_1273 IPR029062 Class I glutamine amidotransferase-like AF_1273 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AF_1273 IPR017926 Glutamine amidotransferase AF_1274 IPR011607 Methylglyoxal synthase-like domain AF_1274 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain AF_1274 IPR011761 ATP-grasp fold AF_1274 IPR006275 Carbamoyl-phosphate synthase, large subunit AF_1274 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AF_1274 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily AF_1274 IPR016185 Pre-ATP-grasp domain superfamily AF_1274 IPR036914 Methylglyoxal synthase-like domain superfamily AF_1274 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AF_1274 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AF_1275 IPR035893 PurE domain superfamily AF_1275 IPR000031 PurE domain AF_1275 IPR039476 Pyridinium-3,5-biscarboxylic acid mononucleotide synthase AF_1277 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AF_1277 IPR017926 Glutamine amidotransferase AF_1277 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AF_1277 IPR029062 Class I glutamine amidotransferase-like AF_1277 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AF_1277 IPR006274 Carbamoyl-phosphate synthase, small subunit AF_1280 IPR001057 Glutamate/acetylglutamate kinase AF_1280 IPR041727 N-Acetyl-L-glutamate kinase, cyclic AF_1280 IPR037528 Acetylglutamate kinase ArgB AF_1280 IPR004662 Acetylglutamate kinase family AF_1280 IPR001048 Aspartate/glutamate/uridylate kinase AF_1280 IPR036393 Acetylglutamate kinase-like superfamily AF_1281 IPR006286 Deglycase PfpI AF_1281 IPR002818 DJ-1/PfpI AF_1281 IPR029062 Class I glutamine amidotransferase-like AF_1284 IPR036249 Thioredoxin-like superfamily AF_1284 IPR013766 Thioredoxin domain AF_1284 IPR017937 Thioredoxin, conserved site AF_1284 IPR005746 Thioredoxin AF_1285 IPR003593 AAA+ ATPase domain AF_1285 IPR003960 ATPase, AAA-type, conserved site AF_1285 IPR005936 Peptidase, FtsH AF_1285 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1285 IPR000642 Peptidase M41 AF_1285 IPR037219 Peptidase M41-like AF_1285 IPR041569 AAA ATPase, AAA+ lid domain AF_1285 IPR003959 ATPase, AAA-type, core AF_1286 IPR037138 Histone deacetylase domain superfamily AF_1286 IPR003085 Acetoin utilization protein AcuC AF_1286 IPR000286 Histone deacetylase family AF_1286 IPR023801 Histone deacetylase domain AF_1286 IPR023696 Ureohydrolase domain superfamily AF_1287 IPR025110 AMP-binding enzyme, C-terminal domain AF_1287 IPR020845 AMP-binding, conserved site AF_1287 IPR000873 AMP-dependent synthetase/ligase AF_1287 IPR042099 AMP-dependent synthetase-like superfamily AF_1289 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1289 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB AF_1291 IPR020616 Thiolase, N-terminal AF_1291 IPR020613 Thiolase, conserved site AF_1291 IPR020615 Thiolase, acyl-enzyme intermediate active site AF_1291 IPR012793 Beta-ketoadipyl CoA thiolase AF_1291 IPR002155 Thiolase AF_1291 IPR016039 Thiolase-like AF_1291 IPR020610 Thiolase, active site AF_1291 IPR020617 Thiolase, C-terminal AF_1293 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_1293 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_1293 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_1293 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_1293 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_1293 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_1293 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_1296 IPR002068 Alpha crystallin/Hsp20 domain AF_1296 IPR008978 HSP20-like chaperone AF_1297 IPR005936 Peptidase, FtsH AF_1297 IPR003593 AAA+ ATPase domain AF_1297 IPR000642 Peptidase M41 AF_1297 IPR037219 Peptidase M41-like AF_1297 IPR041569 AAA ATPase, AAA+ lid domain AF_1297 IPR003959 ATPase, AAA-type, core AF_1297 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1297 IPR003960 ATPase, AAA-type, conserved site AF_1300 IPR003439 ABC transporter-like AF_1300 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1300 IPR017871 ABC transporter, conserved site AF_1300 IPR003593 AAA+ ATPase domain AF_1304 IPR020861 Triosephosphate isomerase, active site AF_1304 IPR000652 Triosephosphate isomerase AF_1304 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AF_1304 IPR035990 Triosephosphate isomerase superfamily AF_1304 IPR013785 Aldolase-type TIM barrel AF_1305 IPR014826 Formaldehyde-activating enzyme AF_1305 IPR020568 Ribosomal protein S5 domain 2-type fold AF_1305 IPR037075 Formaldehyde-activating enzyme superfamily AF_1308 IPR018094 Thymidylate kinase AF_1308 IPR039430 Thymidylate kinase-like domain AF_1308 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1309 IPR039606 Phytol/farnesol kinase AF_1311 IPR023404 Radical SAM, alpha/beta horseshoe AF_1311 IPR006638 Elp3/MiaB/NifB AF_1311 IPR034505 Anaerobic coproporphyrinogen-III oxidase AF_1311 IPR007197 Radical SAM AF_1311 IPR004559 Heme chaperone HemW-like AF_1311 IPR010723 HemN, C-terminal AF_1315 IPR023606 CoA-transferase family III domain superfamily AF_1315 IPR003673 CoA-transferase family III AF_1316 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AF_1316 IPR026260 Threonine synthase, bacterial/archaeal AF_1316 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AF_1316 IPR004450 Threonine synthase-like AF_1316 IPR001926 Pyridoxal-phosphate dependent enzyme AF_1320 IPR001674 GMP synthase, C-terminal AF_1320 IPR022955 GMP synthase AF_1320 IPR017926 Glutamine amidotransferase AF_1320 IPR029062 Class I glutamine amidotransferase-like AF_1320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1320 IPR022310 NAD/GMP synthase AF_1320 IPR025777 GMP synthetase ATP pyrophosphatase domain AF_1320 IPR004739 GMP synthase, glutamine amidotransferase AF_1321 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AF_1321 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1321 IPR020554 Uncharacterised protein family UPF0021, conserved site AF_1321 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type AF_1324 IPR018484 Carbohydrate kinase, FGGY, N-terminal AF_1324 IPR018483 Carbohydrate kinase, FGGY, conserved site AF_1324 IPR000577 Carbohydrate kinase, FGGY AF_1324 IPR018485 Carbohydrate kinase, FGGY, C-terminal AF_1324 IPR006000 Xylulokinase AF_1326 IPR030393 EngB-type guanine nucleotide-binding (G) domain AF_1326 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC AF_1326 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1326 IPR006073 GTP binding domain AF_1328 IPR036188 FAD/NAD(P)-binding domain superfamily AF_1328 IPR006076 FAD dependent oxidoreductase AF_1328 IPR023080 D-amino acid dehydrogenase DadA AF_1336 IPR004485 Cobalamin biosynthesis CobD/CbiB AF_1338 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1338 IPR011698 CobB/CobQ-like glutamine amidotransferase AF_1338 IPR004459 Cobyric acid synthase CobQ AF_1338 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 AF_1338 IPR017929 CobB/CobQ glutamine amidotransferase AF_1338 IPR029062 Class I glutamine amidotransferase-like AF_1339 IPR036920 Ribosomal protein L10e/L16 superfamily AF_1339 IPR020798 Ribosomal protein L16, conserved site AF_1339 IPR000114 Ribosomal protein L16 AF_1339 IPR016180 Ribosomal protein L10e/L16 AF_1340 IPR016142 Citrate synthase-like, large alpha subdomain AF_1340 IPR016143 Citrate synthase-like, small alpha subdomain AF_1340 IPR002020 Citrate synthase AF_1340 IPR019810 Citrate synthase active site AF_1340 IPR024176 Citrate synthase, bacterial-type AF_1340 IPR036969 Citrate synthase superfamily AF_1340 IPR011278 2-methylcitrate synthase/citrate synthase type I AF_1341 IPR028579 Putative thymidine phosphorylase AF_1341 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily AF_1341 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase AF_1341 IPR013466 Thymidine phosphorylase/AMP phosphorylase AF_1341 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site AF_1341 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal AF_1341 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AF_1341 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AF_1341 IPR017459 Glycosyl transferase family 3, N-terminal domain AF_1341 IPR000312 Glycosyl transferase, family 3 AF_1342 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase AF_1342 IPR013466 Thymidine phosphorylase/AMP phosphorylase AF_1342 IPR028579 Putative thymidine phosphorylase AF_1342 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site AF_1342 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal AF_1342 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily AF_1342 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AF_1342 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AF_1342 IPR000312 Glycosyl transferase, family 3 AF_1342 IPR017459 Glycosyl transferase family 3, N-terminal domain AF_1343 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_1343 IPR017782 Hydroxyacylglutathione hydrolase AF_1343 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AF_1343 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AF_1343 IPR001279 Metallo-beta-lactamase AF_1344 IPR002033 Sec-independent periplasmic protein translocase TatC AF_1349 IPR024934 Rubredoxin-like domain AF_1349 IPR018527 Rubredoxin, iron-binding site AF_1349 IPR024935 Rubredoxin domain AF_1349 IPR024922 Rubredoxin AF_1350 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AF_1350 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AF_1350 IPR017782 Hydroxyacylglutathione hydrolase AF_1350 IPR001279 Metallo-beta-lactamase AF_1350 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_1352 IPR038717 Tc1-like transposase, DDE domain AF_1354 IPR013766 Thioredoxin domain AF_1354 IPR036249 Thioredoxin-like superfamily AF_1354 IPR023171 Na/H antiporter domain superfamily AF_1354 IPR004670 Na+/H+ antiporter NhaA AF_1354 IPR012336 Thioredoxin-like fold AF_1356 IPR011862 Phosphate binding protein AF_1356 IPR024370 PBP domain AF_1357 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_1357 IPR035906 MetI-like superfamily AF_1357 IPR011864 Phosphate ABC transporter, permease protein PstC AF_1358 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_1358 IPR005672 Phosphate transport system permease protein PstA AF_1358 IPR035906 MetI-like superfamily AF_1359 IPR015850 ABC transporter, phosphate import, PstB AF_1359 IPR017871 ABC transporter, conserved site AF_1359 IPR003439 ABC transporter-like AF_1359 IPR005670 Phosphate transport system permease protein 1 AF_1359 IPR003593 AAA+ ATPase domain AF_1359 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1360 IPR028366 Phosphate transport system protein PhoU AF_1360 IPR038078 PhoU-like domain superfamily AF_1360 IPR026022 PhoU domain AF_1364 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily AF_1364 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1364 IPR005225 Small GTP-binding protein domain AF_1364 IPR036726 GTP1/OBG domain superfamily AF_1364 IPR006169 GTP1/OBG domain AF_1364 IPR006074 GTP1/OBG, conserved site AF_1364 IPR015349 GTP-binding protein OBG, C-terminal AF_1364 IPR014100 GTP-binding protein Obg/CgtA AF_1364 IPR035101 GTP-binding protein, Obg-type AF_1364 IPR031167 OBG-type guanine nucleotide-binding (G) domain AF_1364 IPR006073 GTP binding domain AF_1365 IPR036676 PurM-like, C-terminal domain superfamily AF_1365 IPR011854 Carbamoyl dehydratase HypE AF_1365 IPR016188 PurM-like, N-terminal domain AF_1365 IPR036921 PurM-like, N-terminal domain superfamily AF_1365 IPR010918 PurM-like, C-terminal domain AF_1366 IPR017968 Acylphosphatase, conserved site AF_1366 IPR036046 Acylphosphatase-like domain superfamily AF_1366 IPR001792 Acylphosphatase-like domain AF_1366 IPR004421 Carbamoyltransferase, HypF-type AF_1366 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AF_1366 IPR041440 HypF, Kae1-like domain AF_1366 IPR006070 YrdC-like domain AF_1366 IPR011125 Zinc finger, HypF-type AF_1367 IPR000688 Hydrogenase maturation factor HypA/HybF AF_1368 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AF_1368 IPR004392 Hydrogenase maturation factor HypB AF_1368 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1369 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AF_1369 IPR019812 Hydrogenase assembly chaperone, conserved site AF_1369 IPR037254 HupF/HypC superfamily AF_1370 IPR042244 HypD, domain 1 AF_1370 IPR002780 Hydrogenase formation HypD protein AF_1370 IPR042243 HypD, domain 2 AF_1372 IPR001501 Nickel-dependent hydrogenase, large subunit AF_1372 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site AF_1372 IPR029014 [NiFe]-hydrogenase, large subunit AF_1373 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AF_1373 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily AF_1378 IPR023430 Peptidase HybD-like domain superfamily AF_1378 IPR004419 Peptidase A31, hydrogenase expression/formation protein AF_1378 IPR000671 Peptidase A31 family AF_1380 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site AF_1380 IPR029014 [NiFe]-hydrogenase, large subunit AF_1380 IPR001501 Nickel-dependent hydrogenase, large subunit AF_1381 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AF_1381 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AF_1381 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily AF_1381 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AF_1381 IPR006311 Twin-arginine translocation pathway, signal sequence AF_1381 IPR001821 [NiFe]-hydrogenase, small subunit AF_1381 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily AF_1384 IPR011006 CheY-like superfamily AF_1384 IPR001789 Signal transduction response regulator, receiver domain AF_1389 IPR003593 AAA+ ATPase domain AF_1389 IPR003439 ABC transporter-like AF_1389 IPR017871 ABC transporter, conserved site AF_1389 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1389 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AF_1390 IPR017871 ABC transporter, conserved site AF_1390 IPR003439 ABC transporter-like AF_1390 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AF_1390 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1390 IPR003593 AAA+ ATPase domain AF_1398 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AF_1398 IPR002365 Terpene synthase, conserved site AF_1398 IPR018333 Squalene cyclase AF_1398 IPR032696 Squalene cyclase, C-terminal AF_1398 IPR032697 Squalene cyclase, N-terminal AF_1398 IPR006400 Squalene hopene cyclase AF_1399 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AF_1399 IPR002372 Pyrrolo-quinoline quinone repeat AF_1399 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AF_1399 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AF_1399 IPR017687 Outer membrane protein assembly factor BamB AF_1401 IPR003439 ABC transporter-like AF_1401 IPR017871 ABC transporter, conserved site AF_1401 IPR003593 AAA+ ATPase domain AF_1401 IPR015863 ABC transporter, hemin import, HmuV AF_1401 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1402 IPR000522 ABC transporter, permease protein, BtuC-like AF_1402 IPR037294 ABC transporter, BtuC-like AF_1409 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AF_1409 IPR001091 Restriction/modification DNA-methylase AF_1409 IPR002941 DNA methylase N-4/N-6 AF_1409 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class AF_1409 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_1414 IPR017260 Uncharacterised conserved protein UCP037673 AF_1414 IPR025595 Domain of unknown function DUF4346 AF_1415 IPR023861 Chloride channel, ClcA AF_1415 IPR014743 Chloride channel, core AF_1415 IPR001807 Chloride channel, voltage gated AF_1417 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_1417 IPR015424 Pyridoxal phosphate-dependent transferase AF_1417 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AF_1417 IPR000192 Aminotransferase class V domain AF_1417 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_1417 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase AF_1418 IPR011913 RfaE bifunctional protein, domain I AF_1418 IPR011914 RfaE bifunctional protein, domain II AF_1418 IPR029056 Ribokinase-like AF_1418 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AF_1418 IPR023030 Bifunctional protein HldE AF_1418 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1418 IPR011611 Carbohydrate kinase PfkB AF_1418 IPR004821 Cytidyltransferase-like domain AF_1419 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AF_1419 IPR000836 Phosphoribosyltransferase domain AF_1419 IPR029057 Phosphoribosyltransferase-like AF_1419 IPR005946 Ribose-phosphate pyrophosphokinase AF_1419 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AF_1419 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type AF_1420 IPR018080 Band 7/stomatin-like, conserved site AF_1420 IPR032435 Band 7, C-terminal extension AF_1420 IPR001107 Band 7 domain AF_1420 IPR036013 Band 7/SPFH domain superfamily AF_1420 IPR001972 Stomatin family AF_1421 IPR005372 Uncharacterised protein family UPF0182 AF_1422 IPR018187 Asp/Glu racemase, active site 1 AF_1422 IPR033134 Asp/Glu racemase, active site 2 AF_1422 IPR015942 Asp/Glu/hydantoin racemase AF_1422 IPR001920 Asp/Glu racemase AF_1422 IPR004380 Aspartate racemase AF_1423 IPR003607 HD/PDEase domain AF_1423 IPR006674 HD domain AF_1424 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic AF_1424 IPR009061 Putative DNA-binding domain superfamily AF_1424 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AF_1424 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal AF_1424 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain AF_1424 IPR005147 tRNA synthetase, B5-domain AF_1425 IPR042253 2,3-bisphosphoglycerate-independent phosphoglycerate mutase superfamily AF_1425 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AF_1425 IPR006124 Metalloenzyme AF_1425 IPR017850 Alkaline-phosphatase-like, core domain superfamily AF_1425 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, prokaryotes AF_1426 IPR000425 Major intrinsic protein AF_1426 IPR034294 Aquaporin transporter AF_1426 IPR023271 Aquaporin-like AF_1433 IPR002802 Protein of unknown function DUF99 AF_1435 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily AF_1435 IPR017770 RNA 3'-terminal phosphate cyclase type 1 AF_1435 IPR000228 RNA 3'-terminal phosphate cyclase AF_1435 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AF_1435 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily AF_1435 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain AF_1435 IPR023797 RNA 3'-terminal phosphate cyclase domain AF_1435 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site AF_1440 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AF_1440 IPR018027 Asn/Gln amidotransferase AF_1440 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic AF_1440 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E AF_1440 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit AF_1440 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site AF_1440 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AF_1440 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 AF_1440 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AF_1442 IPR036076 Fructose-1,6-bisphosphatase, class V superfamily AF_1442 IPR002803 Fructose-1,6-bisphosphatase, class V AF_1443 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1443 IPR010624 KaiC domain AF_1443 IPR013503 Circadian clock KaiC, bacteria AF_1443 IPR014774 KaiC-like domain AF_1443 IPR030665 Circadian clock protein kinase KaiC AF_1448 IPR011008 Dimeric alpha-beta barrel AF_1448 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AF_1448 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1448 IPR036390 Winged helix DNA-binding domain superfamily AF_1448 IPR000485 AsnC-type HTH domain AF_1448 IPR011991 ArsR-like helix-turn-helix domain AF_1448 IPR019888 Transcription regulator AsnC-type AF_1448 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AF_1450 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_1450 IPR007197 Radical SAM AF_1450 IPR013785 Aldolase-type TIM barrel AF_1450 IPR001989 Radical-activating enzyme, conserved site AF_1450 IPR012839 Organic radical enzyme activase AF_1450 IPR034457 Organic radical-activating enzymes AF_1450 IPR040074 BssD/PflA/YjjW AF_1450 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_1452 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_1452 IPR003594 Histidine kinase/HSP90-like ATPase AF_1452 IPR005467 Histidine kinase domain AF_1452 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_1452 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_1452 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_1453 IPR023458 Methionine-tRNA ligase, type 1 AF_1453 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AF_1453 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain AF_1453 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal AF_1453 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1453 IPR002547 tRNA-binding domain AF_1453 IPR012340 Nucleic acid-binding, OB-fold AF_1453 IPR029038 Methionyl-tRNA synthetase, Zn-domain AF_1453 IPR033911 Methioninyl-tRNA synthetase core domain AF_1453 IPR015413 Methionyl/Leucyl tRNA synthetase AF_1453 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AF_1453 IPR014758 Methionyl-tRNA synthetase AF_1458 IPR037235 TRCF-like, C-terminal domain AF_1458 IPR036101 CarD-like/TRCF domain superfamily AF_1458 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1458 IPR011545 DEAD/DEAH box helicase domain AF_1458 IPR003711 CarD-like/TRCF domain AF_1458 IPR004576 Transcription-repair coupling factor AF_1458 IPR001650 Helicase, C-terminal AF_1458 IPR041471 UvrB, interaction domain AF_1458 IPR005118 Transcription-repair-coupling factor, C-terminal domain AF_1458 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_1461 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_1461 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_1461 IPR001080 3Fe-4S ferredoxin AF_1463 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AF_1463 IPR005288 L-aspartate oxidase AF_1463 IPR036188 FAD/NAD(P)-binding domain superfamily AF_1463 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AF_1469 IPR003439 ABC transporter-like AF_1469 IPR003593 AAA+ ATPase domain AF_1469 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1469 IPR017871 ABC transporter, conserved site AF_1470 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1470 IPR017911 ABC transporter, macrolide export, ATP-binding domain AF_1470 IPR003838 ABC transporter permease protein domain AF_1470 IPR003593 AAA+ ATPase domain AF_1470 IPR025857 MacB-like periplasmic core domain AF_1470 IPR017871 ABC transporter, conserved site AF_1470 IPR003439 ABC transporter-like AF_1472 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AF_1472 IPR025944 Sigma-54 interaction domain, conserved site AF_1472 IPR009057 Homeobox-like domain superfamily AF_1472 IPR002078 RNA polymerase sigma factor 54 interaction domain AF_1472 IPR003593 AAA+ ATPase domain AF_1472 IPR002197 DNA binding HTH domain, Fis-type AF_1472 IPR011006 CheY-like superfamily AF_1472 IPR001789 Signal transduction response regulator, receiver domain AF_1472 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1473 IPR011006 CheY-like superfamily AF_1473 IPR001789 Signal transduction response regulator, receiver domain AF_1475 IPR038330 TspO/MBR-related superfamily AF_1475 IPR004307 TspO/MBR-related protein AF_1476 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AF_1476 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AF_1476 IPR037523 Vicinal oxygen chelate (VOC) domain AF_1483 IPR003594 Histidine kinase/HSP90-like ATPase AF_1483 IPR011006 CheY-like superfamily AF_1483 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_1483 IPR033414 Periplasmic sensor domain AF_1483 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_1483 IPR003660 HAMP domain AF_1483 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_1483 IPR005467 Histidine kinase domain AF_1483 IPR001789 Signal transduction response regulator, receiver domain AF_1483 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AF_1483 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_1483 IPR036641 HPT domain superfamily AF_1484 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1484 IPR010624 KaiC domain AF_1484 IPR003593 AAA+ ATPase domain AF_1484 IPR014774 KaiC-like domain AF_1484 IPR030665 Circadian clock protein kinase KaiC AF_1485 IPR004803 tRNA-guanine transglycosylase AF_1485 IPR036511 Queuine tRNA-ribosyltransferase-like AF_1485 IPR002616 tRNA-guanine(15) transglycosylase-like AF_1486 IPR007566 Phosphoenolpyruvate carboxylase, archaeal-type AF_1486 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AF_1488 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain AF_1488 IPR015797 NUDIX hydrolase-like domain superfamily AF_1488 IPR020084 NUDIX hydrolase, conserved site AF_1488 IPR000086 NUDIX hydrolase domain AF_1488 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1488 IPR004821 Cytidyltransferase-like domain AF_1490 IPR023673 Ribosomal protein L1, conserved site AF_1490 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AF_1490 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AF_1490 IPR005878 Ribosomal protein L1, bacterial-type AF_1490 IPR002143 Ribosomal protein L1 AF_1490 IPR023674 Ribosomal protein L1-like AF_1491 IPR022973 Ribosomal protein L10 AF_1491 IPR001790 Ribosomal protein L10P AF_1497 IPR036968 Enolpyruvate transferase domain superfamily AF_1497 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AF_1497 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AF_1497 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AF_1497 IPR001986 Enolpyruvate transferase domain AF_1506 IPR000534 Semialdehyde dehydrogenase, NAD-binding AF_1506 IPR005676 Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking AF_1506 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AF_1506 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site AF_1506 IPR036291 NAD(P)-binding domain superfamily AF_1506 IPR012080 Aspartate-semialdehyde dehydrogenase AF_1509 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_1509 IPR001279 Metallo-beta-lactamase AF_1510 IPR000873 AMP-dependent synthetase/ligase AF_1510 IPR020845 AMP-binding, conserved site AF_1510 IPR042099 AMP-dependent synthetase-like superfamily AF_1510 IPR025110 AMP-binding enzyme, C-terminal domain AF_1511 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AF_1511 IPR036291 NAD(P)-binding domain superfamily AF_1511 IPR016102 Succinyl-CoA synthetase-like AF_1511 IPR005810 Succinyl-CoA ligase, alpha subunit AF_1511 IPR003781 CoA-binding AF_1511 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AF_1511 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AF_1512 IPR002033 Sec-independent periplasmic protein translocase TatC AF_1512 IPR019820 Sec-independent periplasmic protein translocase, conserved site AF_1515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_1515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_1515 IPR003594 Histidine kinase/HSP90-like ATPase AF_1515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_1515 IPR005467 Histidine kinase domain AF_1515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_1516 IPR005224 Sugar fermentation stimulation protein AF_1516 IPR040452 Sugar fermentation stimulation protein, C-terminal AF_1516 IPR041465 SfsA, N-terminal OB domain AF_1518 IPR036551 Flavin prenyltransferase-like AF_1518 IPR003382 Flavoprotein AF_1520 IPR008254 Flavodoxin/nitric oxide synthase AF_1520 IPR001279 Metallo-beta-lactamase AF_1520 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_1520 IPR016440 Rubredoxin-oxygen oxidoreductase AF_1520 IPR029039 Flavoprotein-like superfamily AF_1521 IPR002589 Macro domain AF_1521 IPR024900 O-acetyl-ADP-ribose deacetylase AF_1522 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA AF_1522 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal AF_1522 IPR016181 Acyl-CoA N-acyltransferase AF_1522 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain AF_1522 IPR000182 GNAT domain AF_1522 IPR032672 TmcA/NAT10/Kre33 AF_1522 IPR007807 Helicase domain AF_1522 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1522 IPR038321 TmcA, C-terminal domain superfamily AF_1537 IPR000073 Alpha/beta hydrolase fold-1 AF_1537 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase AF_1537 IPR000639 Epoxide hydrolase-like AF_1537 IPR029058 Alpha/Beta hydrolase fold AF_1538 IPR006160 Short chain fatty acid transporter AtoE AF_1538 IPR006161 Conserved hypothetical protein CHP00336 AF_1539 IPR016102 Succinyl-CoA synthetase-like AF_1539 IPR003781 CoA-binding AF_1539 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AF_1539 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AF_1539 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AF_1539 IPR036291 NAD(P)-binding domain superfamily AF_1539 IPR005810 Succinyl-CoA ligase, alpha subunit AF_1540 IPR016102 Succinyl-CoA synthetase-like AF_1540 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AF_1540 IPR005809 Succinate--CoA synthetase, beta subunit AF_1540 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AF_1540 IPR013815 ATP-grasp fold, subdomain 1 AF_1540 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AF_1540 IPR011761 ATP-grasp fold AF_1541 IPR011701 Major facilitator superfamily AF_1541 IPR036259 MFS transporter superfamily AF_1542 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1542 IPR036390 Winged helix DNA-binding domain superfamily AF_1542 IPR005149 Transcription regulator PadR, N-terminal AF_1546 IPR006686 Mechanosensitive ion channel MscS, conserved site AF_1546 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AF_1546 IPR011066 Mechanosensitive ion channel MscS, C-terminal AF_1546 IPR006685 Mechanosensitive ion channel MscS AF_1546 IPR023408 Mechanosensitive ion channel MscS domain superfamily AF_1546 IPR008910 Conserved TM helix AF_1546 IPR010920 LSM domain superfamily AF_1551 IPR000092 Polyprenyl synthetase AF_1551 IPR008949 Isoprenoid synthase domain superfamily AF_1551 IPR033749 Polyprenyl synthetase, conserved site AF_1553 IPR042080 RNA 2'-phosphotransferase, N-terminal domain AF_1553 IPR002745 Phosphotransferase KptA/Tpt1 AF_1553 IPR042081 RNA 2'-phosphotransferase, C-terminal domain AF_1553 IPR022928 RNA 2'-phosphotransferase KptA, putative AF_1554 IPR036188 FAD/NAD(P)-binding domain superfamily AF_1554 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AF_1554 IPR005982 Thioredoxin reductase AF_1554 IPR023753 FAD/NAD(P)-binding domain AF_1556 IPR004506 tRNA-specific 2-thiouridylase AF_1556 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1556 IPR023382 Adenine nucleotide alpha hydrolase-like domains AF_1558 IPR011890 Structural maintenance of chromosomes protein, prokaryotic AF_1558 IPR036277 SMCs flexible hinge superfamily AF_1558 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1558 IPR003395 RecF/RecN/SMC, N-terminal AF_1558 IPR024704 Structural maintenance of chromosomes protein AF_1558 IPR010935 SMCs flexible hinge AF_1563 IPR022742 Serine aminopeptidase, S33 AF_1563 IPR029058 Alpha/Beta hydrolase fold AF_1580 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1580 IPR036390 Winged helix DNA-binding domain superfamily AF_1580 IPR005234 Chromosome segregation/condensation protein ScpB AF_1587 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase AF_1587 IPR033966 RuBisCO AF_1587 IPR036422 RuBisCO large subunit, N-terminal domain superfamily AF_1587 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal AF_1587 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily AF_1587 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal AF_1595 IPR000541 Cytoplasmic tRNA 2-thiolation protein 1 AF_1595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_1595 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AF_1595 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type AF_1599 IPR013785 Aldolase-type TIM barrel AF_1599 IPR011060 Ribulose-phosphate binding barrel AF_1599 IPR002028 Tryptophan synthase, alpha chain AF_1599 IPR018204 Tryptophan synthase, alpha chain, active site AF_1600 IPR006654 Tryptophan synthase, beta chain AF_1600 IPR001926 Pyridoxal-phosphate dependent enzyme AF_1600 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AF_1600 IPR023026 Tryptophan synthase beta chain/beta chain-like AF_1600 IPR006653 Tryptophan synthase, beta chain, conserved site AF_1601 IPR013785 Aldolase-type TIM barrel AF_1601 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) AF_1601 IPR011060 Ribulose-phosphate binding barrel AF_1602 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AF_1602 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AF_1602 IPR005940 Anthranilate phosphoribosyl transferase AF_1602 IPR017459 Glycosyl transferase family 3, N-terminal domain AF_1602 IPR000312 Glycosyl transferase, family 3 AF_1602 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AF_1602 IPR029062 Class I glutamine amidotransferase-like AF_1602 IPR017926 Glutamine amidotransferase AF_1603 IPR006805 Anthranilate synthase component I, N-terminal AF_1603 IPR019999 Anthranilate synthase component I-like AF_1603 IPR005801 ADC synthase AF_1603 IPR015890 Chorismate-utilising enzyme, C-terminal AF_1604 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AF_1604 IPR017459 Glycosyl transferase family 3, N-terminal domain AF_1604 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AF_1604 IPR005940 Anthranilate phosphoribosyl transferase AF_1604 IPR000312 Glycosyl transferase, family 3 AF_1606 IPR035906 MetI-like superfamily AF_1606 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_1607 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_1607 IPR035906 MetI-like superfamily AF_1608 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AF_1608 IPR017871 ABC transporter, conserved site AF_1608 IPR003439 ABC transporter-like AF_1608 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA AF_1608 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1608 IPR008995 Molybdate/tungstate binding, C-terminal AF_1608 IPR003593 AAA+ ATPase domain AF_1608 IPR013611 Transport-associated OB, type 2 AF_1610 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic AF_1610 IPR016067 S-adenosylmethionine decarboxylase, core AF_1610 IPR017716 S-adenosylmethionine decarboxylase proenzyme AF_1611 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1611 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_1611 IPR002723 N(4)-bis(aminopropyl)spermidine synthase, C-terminal AF_1611 IPR014435 N(4)-bis(aminopropyl)spermidine synthase AF_1612 IPR004841 Amino acid permease/ SLC12A domain AF_1612 IPR011265 GABA permease AF_1612 IPR004840 Amino acid permease, conserved site AF_1615 IPR013483 Molybdenum cofactor biosynthesis protein A AF_1615 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AF_1615 IPR006638 Elp3/MiaB/NifB AF_1615 IPR007197 Radical SAM AF_1615 IPR010505 Molybdenum cofactor synthesis C-terminal AF_1615 IPR013785 Aldolase-type TIM barrel AF_1618 IPR018383 Uncharacterised protein family UPF0324, prokaryote AF_1619 IPR018383 Uncharacterised protein family UPF0324, prokaryote AF_1621 IPR018383 Uncharacterised protein family UPF0324, prokaryote AF_1622 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1622 IPR036390 Winged helix DNA-binding domain superfamily AF_1622 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AF_1622 IPR019888 Transcription regulator AsnC-type AF_1622 IPR011008 Dimeric alpha-beta barrel AF_1622 IPR000485 AsnC-type HTH domain AF_1623 IPR004839 Aminotransferase, class I/classII AF_1623 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AF_1623 IPR015424 Pyridoxal phosphate-dependent transferase AF_1623 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_1623 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_1624 IPR003749 Sulfur carrier ThiS/MoaD-like AF_1624 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AF_1624 IPR012675 Beta-grasp domain superfamily AF_1630 IPR002724 Pyruvoyl-dependent arginine decarboxylase AF_1630 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain AF_1630 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase AF_1638 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I AF_1638 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal AF_1638 IPR036422 RuBisCO large subunit, N-terminal domain superfamily AF_1638 IPR033966 RuBisCO AF_1638 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site AF_1638 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily AF_1638 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal AF_1639 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_1639 IPR035965 PAS domain superfamily AF_1639 IPR005467 Histidine kinase domain AF_1639 IPR003594 Histidine kinase/HSP90-like ATPase AF_1639 IPR000014 PAS domain AF_1639 IPR013767 PAS fold AF_1639 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_1639 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_1639 IPR003660 HAMP domain AF_1639 IPR000700 PAS-associated, C-terminal AF_1639 IPR029151 Periplasmic sensor-like domain superfamily AF_1639 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_1640 IPR009078 Ferritin-like superfamily AF_1640 IPR003251 Rubrerythrin AF_1640 IPR009040 Ferritin-like diiron domain AF_1640 IPR024934 Rubredoxin-like domain AF_1640 IPR012347 Ferritin-like AF_1641 IPR029045 ClpP/crotonase-like domain superfamily AF_1641 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AF_1641 IPR001753 Enoyl-CoA hydratase/isomerase AF_1641 IPR014748 Enoyl-CoA hydratase, C-terminal AF_1642 IPR006195 Aminoacyl-tRNA synthetase, class II AF_1642 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AF_1642 IPR015807 Histidine-tRNA ligase AF_1642 IPR036621 Anticodon-binding domain superfamily AF_1642 IPR004154 Anticodon-binding AF_1642 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AF_1643 IPR002830 UbiD decarboxylyase family AF_1643 IPR022390 4-hydroxybenzoate decarboxylase subunit C AF_1645 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AF_1645 IPR003382 Flavoprotein AF_1645 IPR035929 CoaB-like superfamily AF_1645 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AF_1645 IPR036551 Flavin prenyltransferase-like AF_1652 IPR034202 Subtilisin Carlsberg-like catalytic domain AF_1652 IPR000209 Peptidase S8/S53 domain AF_1652 IPR036852 Peptidase S8/S53 domain superfamily AF_1652 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily AF_1652 IPR022398 Peptidase S8, subtilisin, His-active site AF_1652 IPR023828 Peptidase S8, subtilisin, Ser-active site AF_1652 IPR015500 Peptidase S8, subtilisin-related AF_1652 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 AF_1652 IPR023827 Peptidase S8, subtilisin, Asp-active site AF_1653 IPR023828 Peptidase S8, subtilisin, Ser-active site AF_1653 IPR000209 Peptidase S8/S53 domain AF_1653 IPR036852 Peptidase S8/S53 domain superfamily AF_1653 IPR023827 Peptidase S8, subtilisin, Asp-active site AF_1653 IPR022398 Peptidase S8, subtilisin, His-active site AF_1653 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily AF_1653 IPR015500 Peptidase S8, subtilisin-related AF_1653 IPR034202 Subtilisin Carlsberg-like catalytic domain AF_1664 IPR013509 Ribonucleotide reductase large subunit, N-terminal AF_1664 IPR000788 Ribonucleotide reductase large subunit, C-terminal AF_1664 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent AF_1664 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AF_1664 IPR005144 ATP-cone domain AF_1665 IPR036291 NAD(P)-binding domain superfamily AF_1665 IPR023401 Ornithine cyclodeaminase, N-terminal AF_1665 IPR003462 Ornithine cyclodeaminase/mu-crystallin AF_1669 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily AF_1669 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal AF_1669 IPR011802 Adenylylsulphate reductase, beta subunit AF_1669 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_1669 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_1670 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AF_1670 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AF_1670 IPR036188 FAD/NAD(P)-binding domain superfamily AF_1670 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AF_1670 IPR011803 Adenylylsulphate reductase, alpha subunit AF_1671 IPR028154 AMP-dependent ligase, C-terminal AF_1671 IPR000873 AMP-dependent synthetase/ligase AF_1671 IPR011880 Phenylacetate-CoA ligase AF_1671 IPR042099 AMP-dependent synthetase-like superfamily AF_1674 IPR032837 Glycerol-1-phosphate dehydrogenase AF_1674 IPR023003 Glycerol-1-phosphate dehydrogenase, bacteria AF_1676 IPR027546 Sirtuin, class III AF_1676 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_1676 IPR003000 Sirtuin family AF_1676 IPR026591 Sirtuin, catalytic core small domain superfamily AF_1676 IPR026590 Sirtuin family, catalytic core domain AF_1677 IPR042214 Pseudouridine synthase, TruD, catalytic domain AF_1677 IPR011760 Pseudouridine synthase, TruD, insertion domain AF_1677 IPR020119 Pseudouridine synthase TruD, conserved site AF_1677 IPR001656 Pseudouridine synthase, TruD AF_1677 IPR020103 Pseudouridine synthase, catalytic domain superfamily AF_1685 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type AF_1685 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AF_1685 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1692 IPR000445 Helix-hairpin-helix motif AF_1692 IPR003265 HhH-GPD domain AF_1692 IPR004035 Endonuclease III, iron-sulphur binding site AF_1692 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AF_1692 IPR004036 Endonuclease III-like, conserved site-2 AF_1692 IPR011257 DNA glycosylase AF_1692 IPR005759 Endonuclease III AF_1692 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AF_1693 IPR010918 PurM-like, C-terminal domain AF_1693 IPR036676 PurM-like, C-terminal domain superfamily AF_1693 IPR016188 PurM-like, N-terminal domain AF_1693 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AF_1693 IPR036921 PurM-like, N-terminal domain superfamily AF_1695 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_1695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_1695 IPR003710 Ketopantoate reductase ApbA/PanE AF_1695 IPR013752 Ketopantoate reductase, C-terminal domain AF_1695 IPR013332 Ketopantoate reductase, N-terminal domain AF_1695 IPR036291 NAD(P)-binding domain superfamily AF_1698 IPR008914 Phosphatidylethanolamine-binding protein AF_1698 IPR036610 PEBP-like superfamily AF_1698 IPR005247 YbhB/YbcL AF_1701 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal AF_1701 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AF_1701 IPR029061 Thiamin diphosphate-binding fold AF_1701 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AF_1702 IPR029061 Thiamin diphosphate-binding fold AF_1702 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AF_1704 IPR030869 1,4-dihydroxy-6-naphtoate synthase AF_1704 IPR003773 Menaquinone biosynthesis enzyme AF_1706 IPR000073 Alpha/beta hydrolase fold-1 AF_1706 IPR029058 Alpha/Beta hydrolase fold AF_1708 IPR021810 Protein of unknown function DUF3387 AF_1708 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_1708 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1708 IPR040980 SWI2/SNF2 ATPase AF_1708 IPR004473 Restriction endonuclease, type I, HsdR AF_1708 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AF_1710 IPR000055 Restriction endonuclease, type I, HsdS AF_1716 IPR029058 Alpha/Beta hydrolase fold AF_1716 IPR013094 Alpha/beta hydrolase fold-3 AF_1717 IPR012440 Protein of unknown function DUF1641 AF_1719 IPR004789 Acetolactate synthase, small subunit AF_1719 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AF_1719 IPR019455 Acetolactate synthase, small subunit, C-terminal AF_1719 IPR002912 ACT domain AF_1719 IPR039557 AHAS, ACT domain AF_1720 IPR012000 Thiamine pyrophosphate enzyme, central domain AF_1720 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AF_1720 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AF_1720 IPR029061 Thiamin diphosphate-binding fold AF_1720 IPR039368 Acetolactate synthase large subunit, TPP binding domain AF_1720 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_1720 IPR012846 Acetolactate synthase, large subunit, biosynthetic AF_1721 IPR005467 Histidine kinase domain AF_1721 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_1721 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_1721 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_1721 IPR003660 HAMP domain AF_1721 IPR003594 Histidine kinase/HSP90-like ATPase AF_1721 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_1726 IPR006164 Ku70/Ku80 beta-barrel domain AF_1726 IPR016194 SPOC-like, C-terminal domain superfamily AF_1726 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AF_1727 IPR015884 Malic enzyme, conserved site AF_1727 IPR036291 NAD(P)-binding domain superfamily AF_1727 IPR037062 Malic enzyme, N-terminal domain superfamily AF_1727 IPR012302 Malic enzyme, NAD-binding AF_1727 IPR001891 Malic oxidoreductase AF_1727 IPR012301 Malic enzyme, N-terminal domain AF_1728 IPR001296 Glycosyl transferase, family 1 AF_1728 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AF_1728 IPR017814 Mycothiol biosynthesis protein, MshA AF_1730 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AF_1730 IPR001406 Pseudouridine synthase I, TruA AF_1730 IPR020095 Pseudouridine synthase I, TruA, C-terminal AF_1730 IPR020103 Pseudouridine synthase, catalytic domain superfamily AF_1732 IPR036291 NAD(P)-binding domain superfamily AF_1732 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AF_1732 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AF_1732 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AF_1732 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AF_1732 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AF_1736 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily AF_1736 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily AF_1736 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type AF_1736 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily AF_1736 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II AF_1736 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site AF_1737 IPR036249 Thioredoxin-like superfamily AF_1737 IPR012341 Six-hairpin glycosidase-like superfamily AF_1737 IPR024705 Spermatogenesis-associated protein 20 AF_1737 IPR004879 Domain of unknown function DUF255 AF_1737 IPR008928 Six-hairpin glycosidase superfamily AF_1741 IPR023031 Orotate phosphoribosyltransferase AF_1741 IPR029057 Phosphoribosyltransferase-like AF_1741 IPR000836 Phosphoribosyltransferase domain AF_1743 IPR000835 MarR-type HTH domain AF_1743 IPR023071 Transcriptional regulator, SlyA AF_1743 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1743 IPR036390 Winged helix DNA-binding domain superfamily AF_1743 IPR023187 Transcriptional regulator MarR-type, conserved site AF_1744 IPR000462 CDP-alcohol phosphatidyltransferase AF_1746 IPR029020 Ammonium/urea transporter AF_1746 IPR001905 Ammonium transporter AF_1746 IPR018047 Ammonium transporter, conserved site AF_1746 IPR024041 Ammonium transporter AmtB-like domain AF_1747 IPR002187 Nitrogen regulatory protein PII AF_1747 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AF_1747 IPR011322 Nitrogen regulatory PII-like, alpha/beta AF_1747 IPR017918 Nitrogen regulatory protein PII, conserved site AF_1748 IPR001279 Metallo-beta-lactamase AF_1748 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AF_1748 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AF_1748 IPR017782 Hydroxyacylglutathione hydrolase AF_1748 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_1749 IPR029020 Ammonium/urea transporter AF_1749 IPR001905 Ammonium transporter AF_1749 IPR018047 Ammonium transporter, conserved site AF_1749 IPR024041 Ammonium transporter AmtB-like domain AF_1750 IPR011322 Nitrogen regulatory PII-like, alpha/beta AF_1750 IPR002187 Nitrogen regulatory protein PII AF_1750 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AF_1750 IPR017918 Nitrogen regulatory protein PII, conserved site AF_1750 IPR002332 Nitrogen regulatory protein P-II, urydylation site AF_1751 IPR042253 2,3-bisphosphoglycerate-independent phosphoglycerate mutase superfamily AF_1751 IPR006124 Metalloenzyme AF_1751 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AF_1751 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, prokaryotes AF_1751 IPR017850 Alkaline-phosphatase-like, core domain superfamily AF_1752 IPR005999 Glycerol kinase AF_1752 IPR018483 Carbohydrate kinase, FGGY, conserved site AF_1752 IPR018485 Carbohydrate kinase, FGGY, C-terminal AF_1752 IPR000577 Carbohydrate kinase, FGGY AF_1752 IPR018484 Carbohydrate kinase, FGGY, N-terminal AF_1755 IPR011606 Branched-chain amino acid transport, permease AF_1761 IPR033940 3-isopropylmalate dehydratase, swivel domain AF_1761 IPR011827 Hydrolyase LeuD/HacB/DmdB AF_1761 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AF_1761 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AF_1764 IPR002125 Cytidine and deoxycytidylate deaminase domain AF_1764 IPR016192 APOBEC/CMP deaminase, zinc-binding AF_1764 IPR016193 Cytidine deaminase-like AF_1764 IPR035105 Deoxycytidylate deaminase domain AF_1764 IPR013404 Competence operon E, ComEB AF_1764 IPR015517 Deoxycytidylate deaminase-related AF_1765 IPR018228 Deoxyribonuclease, TatD-related, conserved site AF_1765 IPR001130 TatD family AF_1765 IPR032466 Metal-dependent hydrolase AF_1767 IPR023765 Solute-binding protein family 5, conserved site AF_1767 IPR000914 Solute-binding protein family 5 domain AF_1767 IPR039424 Solute-binding protein family 5 AF_1767 IPR030678 Peptide/nickel binding protein, MppA-type AF_1768 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AF_1768 IPR035906 MetI-like superfamily AF_1770 IPR003593 AAA+ ATPase domain AF_1770 IPR017871 ABC transporter, conserved site AF_1770 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AF_1770 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1770 IPR003439 ABC transporter-like AF_1771 IPR003439 ABC transporter-like AF_1771 IPR017871 ABC transporter, conserved site AF_1771 IPR003593 AAA+ ATPase domain AF_1771 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AF_1771 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1772 IPR000873 AMP-dependent synthetase/ligase AF_1772 IPR020845 AMP-binding, conserved site AF_1772 IPR025110 AMP-binding enzyme, C-terminal domain AF_1772 IPR042099 AMP-dependent synthetase-like superfamily AF_1773 IPR036197 NarG-like superfamily AF_1773 IPR004017 Cysteine-rich domain AF_1773 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_1773 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_1773 IPR009051 Alpha-helical ferredoxin AF_1774 IPR002293 Amino acid/polyamine transporter I AF_1777 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AF_1777 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AF_1778 IPR036751 Stage V sporulation protein G superfamily AF_1778 IPR007170 Stage V sporulation protein G AF_1779 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AF_1779 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AF_1779 IPR036291 NAD(P)-binding domain superfamily AF_1779 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AF_1779 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AF_1780 IPR039368 Acetolactate synthase large subunit, TPP binding domain AF_1780 IPR029061 Thiamin diphosphate-binding fold AF_1780 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AF_1780 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_1780 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AF_1780 IPR012846 Acetolactate synthase, large subunit, biosynthetic AF_1780 IPR012000 Thiamine pyrophosphate enzyme, central domain AF_1780 IPR000399 TPP-binding enzyme, conserved site AF_1783 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AF_1783 IPR023165 rRNA adenine dimethylase-like AF_1783 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AF_1783 IPR011530 Ribosomal RNA adenine dimethylase AF_1783 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_1783 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AF_1787 IPR025194 Domain of unknown function DUF4115 AF_1787 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AF_1787 IPR023690 Cytoskeleton protein RodZ AF_1787 IPR001387 Cro/C1-type helix-turn-helix domain AF_1788 IPR010044 Methylthioadenosine phosphorylase (MTAP) AF_1788 IPR000845 Nucleoside phosphorylase domain AF_1788 IPR035994 Nucleoside phosphorylase superfamily AF_1795 IPR008007 Peptidase M42 AF_1795 IPR023367 Peptidase M42, domain 2 AF_1796 IPR001347 Sugar isomerase (SIS) AF_1796 IPR017552 3-hexulose-6-phosphate isomerase AF_1797 IPR028366 Phosphate transport system protein PhoU AF_1797 IPR026022 PhoU domain AF_1797 IPR038078 PhoU-like domain superfamily AF_1798 IPR001204 Phosphate transporter AF_1801 IPR004384 RNA methyltransferase TrmJ/LasT AF_1801 IPR001537 tRNA/rRNA methyltransferase, SpoU type AF_1801 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AF_1801 IPR029028 Alpha/beta knot methyltransferases AF_1806 IPR028612 DNA topoisomerase I, type IA AF_1806 IPR005733 DNA topoisomerase I, bacterial-type AF_1806 IPR013498 DNA topoisomerase, type IA, zn finger AF_1806 IPR006171 TOPRIM domain AF_1806 IPR034149 DNA topoisomerase 1, TOPRIM domain AF_1806 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AF_1806 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AF_1806 IPR023405 DNA topoisomerase, type IA, core domain AF_1806 IPR003601 DNA topoisomerase, type IA, domain 2 AF_1806 IPR013497 DNA topoisomerase, type IA, central AF_1806 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AF_1806 IPR000380 DNA topoisomerase, type IA AF_1806 IPR023406 DNA topoisomerase, type IA, active site AF_1806 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AF_1810 IPR013785 Aldolase-type TIM barrel AF_1810 IPR006638 Elp3/MiaB/NifB AF_1810 IPR013483 Molybdenum cofactor biosynthesis protein A AF_1810 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AF_1810 IPR010505 Molybdenum cofactor synthesis C-terminal AF_1810 IPR007197 Radical SAM AF_1811 IPR016193 Cytidine deaminase-like AF_1811 IPR002695 Bifunctional purine biosynthesis protein PurH-like AF_1811 IPR036914 Methylglyoxal synthase-like domain superfamily AF_1811 IPR011607 Methylglyoxal synthase-like domain AF_1811 IPR024051 AICAR transformylase, duplicated domain superfamily AF_1813 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1813 IPR000642 Peptidase M41 AF_1813 IPR003959 ATPase, AAA-type, core AF_1813 IPR005936 Peptidase, FtsH AF_1813 IPR037219 Peptidase M41-like AF_1813 IPR003593 AAA+ ATPase domain AF_1813 IPR003960 ATPase, AAA-type, conserved site AF_1813 IPR041569 AAA ATPase, AAA+ lid domain AF_1815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_1815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_1815 IPR015424 Pyridoxal phosphate-dependent transferase AF_1815 IPR017747 Putrescine aminotransferase AF_1815 IPR005814 Aminotransferase class-III AF_1817 IPR001647 DNA-binding HTH domain, TetR-type AF_1817 IPR009057 Homeobox-like domain superfamily AF_1817 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AF_1819 IPR003439 ABC transporter-like AF_1819 IPR003593 AAA+ ATPase domain AF_1819 IPR017871 ABC transporter, conserved site AF_1819 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1825 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AF_1825 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AF_1825 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AF_1825 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AF_1826 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AF_1826 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AF_1826 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AF_1826 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AF_1827 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AF_1827 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AF_1829 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AF_1829 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit AF_1830 IPR029014 [NiFe]-hydrogenase, large subunit AF_1830 IPR001135 NADH-quinone oxidoreductase, subunit D AF_1830 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily AF_1830 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H AF_1831 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site AF_1831 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H AF_1838 IPR020626 L-aspartate dehydrogenase, prokaryotic AF_1838 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AF_1838 IPR002811 Aspartate dehydrogenase AF_1838 IPR036291 NAD(P)-binding domain superfamily AF_1838 IPR011182 L-aspartate dehydrogenase AF_1839 IPR013785 Aldolase-type TIM barrel AF_1839 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AF_1839 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AF_1839 IPR004393 Nicotinate-nucleotide pyrophosphorylase AF_1839 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AF_1839 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AF_1839 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AF_1840 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AF_1840 IPR001714 Peptidase M24, methionine aminopeptidase AF_1840 IPR000994 Peptidase M24 AF_1840 IPR036005 Creatinase/aminopeptidase-like AF_1841 IPR003593 AAA+ ATPase domain AF_1841 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1841 IPR003439 ABC transporter-like AF_1841 IPR017871 ABC transporter, conserved site AF_1843 IPR002751 Metal transport protein CbiM/NikMN AF_1843 IPR025937 PDGLE domain AF_1849 IPR016101 CO dehydrogenase, alpha-bundle AF_1849 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase AF_1849 IPR016099 Prismane-like, alpha/beta-sandwich AF_1849 IPR011254 Prismane-like superfamily AF_1849 IPR010047 Ni-containing CO dehydrogenase AF_1854 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily AF_1854 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AF_1854 IPR003702 Acetyl-CoA hydrolase/transferase AF_1854 IPR037171 NagB/RpiA transferase-like AF_1854 IPR023990 Butyryl-CoA:acetate CoA-transferase AF_1855 IPR042099 AMP-dependent synthetase-like superfamily AF_1855 IPR025110 AMP-binding enzyme, C-terminal domain AF_1855 IPR020845 AMP-binding, conserved site AF_1855 IPR000873 AMP-dependent synthetase/ligase AF_1858 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AF_1858 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF_1858 IPR036188 FAD/NAD(P)-binding domain superfamily AF_1858 IPR023753 FAD/NAD(P)-binding domain AF_1876 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 AF_1876 IPR021127 CRISPR-associated endonuclease Cas2 AF_1877 IPR011335 Restriction endonuclease type II-like AF_1877 IPR011604 Exonuclease, phage-type/RecB, C-terminal AF_1877 IPR013343 CRISPR-associated protein Cas4 AF_1877 IPR022765 Dna2/Cas4, domain of unknown function DUF83 AF_1878 IPR019855 CRISPR-associated protein Cas1, NMENI subtype AF_1878 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain AF_1878 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain AF_1878 IPR002729 CRISPR-associated protein Cas1 AF_1883 IPR005981 ABC-2 type transporter, NodJ AF_1883 IPR000412 ABC-2 transporter AF_1883 IPR013525 ABC-2 type transporter AF_1884 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1884 IPR003593 AAA+ ATPase domain AF_1884 IPR003439 ABC transporter-like AF_1884 IPR017871 ABC transporter, conserved site AF_1886 IPR014724 RNA polymerase Rpb2, OB-fold AF_1886 IPR007641 RNA polymerase Rpb2, domain 7 AF_1886 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily AF_1886 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AF_1886 IPR015712 DNA-directed RNA polymerase, subunit 2 AF_1886 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain AF_1886 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type AF_1886 IPR007121 RNA polymerase, beta subunit, conserved site AF_1886 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily AF_1886 IPR007644 RNA polymerase, beta subunit, protrusion AF_1886 IPR007642 RNA polymerase Rpb2, domain 2 AF_1886 IPR037034 RNA polymerase Rpb2, domain 2 superfamily AF_1886 IPR007645 RNA polymerase Rpb2, domain 3 AF_1887 IPR014724 RNA polymerase Rpb2, OB-fold AF_1887 IPR007644 RNA polymerase, beta subunit, protrusion AF_1887 IPR007645 RNA polymerase Rpb2, domain 3 AF_1887 IPR037034 RNA polymerase Rpb2, domain 2 superfamily AF_1887 IPR007642 RNA polymerase Rpb2, domain 2 AF_1887 IPR007641 RNA polymerase Rpb2, domain 7 AF_1887 IPR007121 RNA polymerase, beta subunit, conserved site AF_1887 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AF_1887 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily AF_1887 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain AF_1887 IPR015712 DNA-directed RNA polymerase, subunit 2 AF_1887 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type AF_1888 IPR038120 RNA polymerase Rpb1, funnel domain superfamily AF_1888 IPR007081 RNA polymerase Rpb1, domain 5 AF_1888 IPR007083 RNA polymerase Rpb1, domain 4 AF_1888 IPR007066 RNA polymerase Rpb1, domain 3 AF_1888 IPR007080 RNA polymerase Rpb1, domain 1 AF_1888 IPR006592 RNA polymerase, N-terminal AF_1888 IPR042102 RNA polymerase Rpb1, domain 3 superfamily AF_1888 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AF_1888 IPR000722 RNA polymerase, alpha subunit AF_1890 IPR029064 50S ribosomal protein L30e-like AF_1890 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 AF_1890 IPR023460 Ribosomal protein L7Ae, putative AF_1891 IPR036555 NusA, N-terminal domain superfamily AF_1891 IPR010213 Transcription termination factor NusA AF_1891 IPR004087 K Homology domain AF_1891 IPR030842 Transcription termination/antitermination protein NusA, bacterial AF_1891 IPR012340 Nucleic acid-binding, OB-fold AF_1891 IPR003029 S1 domain AF_1891 IPR022967 RNA-binding domain, S1 AF_1891 IPR025249 KH domain, NusA-like AF_1891 IPR015946 K homology domain-like, alpha/beta AF_1891 IPR009019 K homology domain superfamily, prokaryotic type AF_1891 IPR013735 Transcription factor NusA, N-terminal AF_1893 IPR036823 Ribosomal protein S7 domain superfamily AF_1893 IPR000235 Ribosomal protein S5/S7 AF_1893 IPR005717 Ribosomal protein S7, bacterial/organellar-type AF_1893 IPR020606 Ribosomal protein S7, conserved site AF_1893 IPR023798 Ribosomal protein S7 domain AF_1894 IPR004161 Translation elongation factor EFTu-like, domain 2 AF_1894 IPR005517 Translation elongation factor EFG/EF2, domain IV AF_1894 IPR004540 Translation elongation factor EFG/EF2 AF_1894 IPR009000 Translation protein, beta-barrel domain superfamily AF_1894 IPR005225 Small GTP-binding protein domain AF_1894 IPR031157 Tr-type G domain, conserved site AF_1894 IPR020568 Ribosomal protein S5 domain 2-type fold AF_1894 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_1894 IPR041095 Elongation Factor G, domain II AF_1894 IPR009022 Elongation factor G, domain III AF_1894 IPR035647 EF-G domain III/V-like AF_1894 IPR035649 EFG, domain V AF_1894 IPR000640 Elongation factor EFG, domain V-like AF_1894 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1894 IPR000795 Transcription factor, GTP-binding domain AF_1896 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic AF_1896 IPR005025 NADPH-dependent FMN reductase-like AF_1896 IPR010089 Flavoprotein WrbA-like AF_1896 IPR008254 Flavodoxin/nitric oxide synthase AF_1896 IPR029039 Flavoprotein-like superfamily AF_1898 IPR011006 CheY-like superfamily AF_1898 IPR001789 Signal transduction response regulator, receiver domain AF_1899 IPR013264 DNA primase, catalytic core, N-terminal AF_1899 IPR006295 DNA primase, DnaG AF_1899 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AF_1899 IPR030846 DNA primase DnaG, bacteria AF_1899 IPR034151 Bacterial DnaG primase, TOPRIM domain AF_1899 IPR002694 Zinc finger, CHC2-type AF_1899 IPR006171 TOPRIM domain AF_1899 IPR036977 DNA Primase, CHC2-type zinc finger AF_1900 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1900 IPR011994 Cytidylate kinase domain AF_1900 IPR003136 Cytidylate kinase AF_1902 IPR023201 SecY domain superfamily AF_1902 IPR030659 SecY conserved site AF_1902 IPR026593 Protein translocase subunit SecY AF_1902 IPR002208 SecY/SEC61-alpha family AF_1903 IPR001196 Ribosomal protein L15, conserved site AF_1903 IPR021131 Ribosomal protein L18e/L15P AF_1903 IPR030878 Ribosomal protein L15 AF_1903 IPR036227 Ribosomal L18e/L15P superfamily AF_1903 IPR005749 Ribosomal protein L15, bacterial-type AF_1905 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_1905 IPR000851 Ribosomal protein S5 AF_1905 IPR005712 Ribosomal protein S5, bacterial-type AF_1905 IPR005324 Ribosomal protein S5, C-terminal AF_1905 IPR020568 Ribosomal protein S5 domain 2-type fold AF_1905 IPR018192 Ribosomal protein S5, N-terminal, conserved site AF_1905 IPR013810 Ribosomal protein S5, N-terminal AF_1906 IPR005484 Ribosomal protein L18 AF_1906 IPR004389 Ribosomal protein L18, bacterial-type AF_1909 IPR002358 Ribosomal protein L6, conserved site AF_1909 IPR019906 Ribosomal protein L6, bacterial-type AF_1909 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily AF_1909 IPR000702 Ribosomal protein L6 AF_1909 IPR020040 Ribosomal protein L6, alpha-beta domain AF_1910 IPR035987 Ribosomal protein S8 superfamily AF_1910 IPR000630 Ribosomal protein S8 AF_1912 IPR020930 Ribosomal protein L5, bacterial-type AF_1912 IPR031309 Ribosomal protein L5, C-terminal AF_1912 IPR031310 Ribosomal protein L5, N-terminal AF_1912 IPR002132 Ribosomal protein L5 AF_1912 IPR022803 Ribosomal protein L5 domain superfamily AF_1914 IPR005824 KOW AF_1914 IPR041988 Ribosomal Protein L26/L24, KOW domain AF_1914 IPR014722 Ribosomal protein L2, domain 2 AF_1914 IPR003256 Ribosomal protein L24 AF_1914 IPR005825 Ribosomal protein L24/L26, conserved site AF_1914 IPR008991 Translation protein SH3-like domain superfamily AF_1915 IPR036853 Ribosomal protein L14 superfamily AF_1915 IPR000218 Ribosomal protein L14P AF_1915 IPR019972 Ribosomal protein L14P, conserved site AF_1915 IPR005745 Ribosomal protein L14P, bacterial-type AF_1916 IPR012340 Nucleic acid-binding, OB-fold AF_1916 IPR019984 30S ribosomal protein S17 AF_1916 IPR019979 Ribosomal protein S17, conserved site AF_1916 IPR000266 Ribosomal protein S17/S11 AF_1918 IPR001854 Ribosomal protein L29/L35 AF_1918 IPR036049 Ribosomal protein L29/L35 superfamily AF_1919 IPR036419 Ribosomal protein S3, C-terminal domain superfamily AF_1919 IPR004087 K Homology domain AF_1919 IPR018280 Ribosomal protein S3, conserved site AF_1919 IPR004044 K Homology domain, type 2 AF_1919 IPR015946 K homology domain-like, alpha/beta AF_1919 IPR009019 K homology domain superfamily, prokaryotic type AF_1919 IPR001351 Ribosomal protein S3, C-terminal AF_1919 IPR005704 Ribosomal protein S3, bacterial-type AF_1920 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AF_1920 IPR036394 Ribosomal protein L22/L17 superfamily AF_1920 IPR001063 Ribosomal protein L22/L17 AF_1921 IPR002222 Ribosomal protein S19/S15 AF_1921 IPR005732 Ribosomal protein S19, bacterial-type AF_1921 IPR020934 Ribosomal protein S19 conserved site AF_1921 IPR023575 Ribosomal protein S19, superfamily AF_1922 IPR012340 Nucleic acid-binding, OB-fold AF_1922 IPR022666 Ribosomal Proteins L2, RNA binding domain AF_1922 IPR008991 Translation protein SH3-like domain superfamily AF_1922 IPR014726 Ribosomal protein L2, domain 3 AF_1922 IPR022671 Ribosomal protein L2, conserved site AF_1922 IPR022669 Ribosomal protein L2, C-terminal AF_1922 IPR005880 Ribosomal protein L2, bacterial/organellar-type AF_1922 IPR014722 Ribosomal protein L2, domain 2 AF_1922 IPR002171 Ribosomal protein L2 AF_1923 IPR012678 Ribosomal protein L23/L15e core domain superfamily AF_1923 IPR013025 Ribosomal protein L25/L23 AF_1923 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AF_1923 IPR001014 Ribosomal protein L23/L25, conserved site AF_1924 IPR002136 Ribosomal protein L4/L1e AF_1924 IPR023574 Ribosomal protein L4 domain superfamily AF_1924 IPR013005 50S ribosomal protein uL4 AF_1925 IPR019927 Ribosomal protein L3, bacterial/organelle-type AF_1925 IPR019926 Ribosomal protein L3, conserved site AF_1925 IPR009000 Translation protein, beta-barrel domain superfamily AF_1925 IPR000597 Ribosomal protein L3 AF_1930 IPR013108 Amidohydrolase 3 AF_1930 IPR032466 Metal-dependent hydrolase AF_1930 IPR011059 Metal-dependent hydrolase, composite domain superfamily AF_1930 IPR012027 Formylmethanofuran dehydrogenase, subunit A AF_1932 IPR025110 AMP-binding enzyme, C-terminal domain AF_1932 IPR042099 AMP-dependent synthetase-like superfamily AF_1932 IPR000873 AMP-dependent synthetase/ligase AF_1932 IPR020459 AMP-binding AF_1932 IPR020845 AMP-binding, conserved site AF_1935 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase AF_1938 IPR016181 Acyl-CoA N-acyltransferase AF_1938 IPR013815 ATP-grasp fold, subdomain 1 AF_1938 IPR000182 GNAT domain AF_1938 IPR003781 CoA-binding AF_1938 IPR011761 ATP-grasp fold AF_1938 IPR036291 NAD(P)-binding domain superfamily AF_1938 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AF_1938 IPR016102 Succinyl-CoA synthetase-like AF_1940 IPR016188 PurM-like, N-terminal domain AF_1940 IPR036676 PurM-like, C-terminal domain superfamily AF_1940 IPR010918 PurM-like, C-terminal domain AF_1940 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain AF_1940 IPR036921 PurM-like, N-terminal domain superfamily AF_1940 IPR010074 Phosphoribosylformylglycinamidine subunit PurL AF_1941 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily AF_1941 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS AF_1950 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AF_1950 IPR023019 Histidine biosynthesis bifunctional protein HisIE AF_1950 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AF_1950 IPR026660 Phosphoribosyl-AMP cyclohydrolase AF_1950 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AF_1950 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase AF_1951 IPR002792 TRAM domain AF_1951 IPR029060 PIN-like domain superfamily AF_1954 IPR023631 Amidase signature domain AF_1954 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AF_1954 IPR036928 Amidase signature (AS) superfamily AF_1954 IPR020556 Amidase, conserved site AF_1954 IPR000120 Amidase AF_1955 IPR002319 Phenylalanyl-tRNA synthetase AF_1955 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal AF_1955 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AF_1955 IPR006195 Aminoacyl-tRNA synthetase, class II AF_1957 IPR010327 FldB/FldC dehydratase alpha/beta subunit AF_1958 IPR010327 FldB/FldC dehydratase alpha/beta subunit AF_1959 IPR008275 CoA enzyme activase AF_1959 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type AF_1960 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1960 IPR020590 Guanylate kinase, conserved site AF_1960 IPR017665 Guanylate kinase AF_1960 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AF_1960 IPR008144 Guanylate kinase-like domain AF_1960 IPR003593 AAA+ ATPase domain AF_1963 IPR018136 Aconitase family, 4Fe-4S cluster binding site AF_1963 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria AF_1963 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AF_1963 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit AF_1963 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic AF_1963 IPR036008 Aconitase, iron-sulfur domain AF_1963 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AF_1963 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AF_1968 IPR000600 ROK family AF_1968 IPR022687 DTXR-type HTH domain AF_1968 IPR036388 Winged helix-like DNA-binding domain superfamily AF_1968 IPR036390 Winged helix DNA-binding domain superfamily AF_1969 IPR023473 AMMECR1 AF_1969 IPR023472 Uncharacterised protein family MJ0810 AF_1969 IPR027623 AmmeMemoRadiSam system protein A AF_1969 IPR027485 AMMECR1, N-terminal AF_1969 IPR002733 AMMECR1 domain AF_1969 IPR036071 AMMECR1 domain superfamily AF_1971 IPR008978 HSP20-like chaperone AF_1971 IPR002068 Alpha crystallin/Hsp20 domain AF_1973 IPR012340 Nucleic acid-binding, OB-fold AF_1973 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_1973 IPR002792 TRAM domain AF_1973 IPR010280 (Uracil-5)-methyltransferase family AF_1973 IPR030390 RNA methyltransferase TrmA, active site AF_1974 IPR030656 Delta-aminolevulinic acid dehydratase, active site AF_1974 IPR013785 Aldolase-type TIM barrel AF_1974 IPR001731 Delta-aminolevulinic acid dehydratase AF_1975 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AF_1975 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AF_1975 IPR018214 Glutamyl-tRNA reductase, conserved site AF_1975 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily AF_1975 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily AF_1975 IPR036291 NAD(P)-binding domain superfamily AF_1975 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AF_1975 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AF_1976 IPR037219 Peptidase M41-like AF_1976 IPR005936 Peptidase, FtsH AF_1976 IPR011546 Peptidase M41, FtsH extracellular AF_1976 IPR003960 ATPase, AAA-type, conserved site AF_1976 IPR003959 ATPase, AAA-type, core AF_1976 IPR041569 AAA ATPase, AAA+ lid domain AF_1976 IPR003593 AAA+ ATPase domain AF_1976 IPR000642 Peptidase M41 AF_1976 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1980 IPR003557 Cytochrome c-type biogenesis protein CcmC AF_1980 IPR002541 Cytochrome c assembly protein AF_1981 IPR037294 ABC transporter, BtuC-like AF_1981 IPR001626 ABC transporter, TroCD-like AF_1982 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_1982 IPR003439 ABC transporter-like AF_1982 IPR003593 AAA+ ATPase domain AF_1982 IPR017871 ABC transporter, conserved site AF_1983 IPR006127 Periplasmic solute binding protein, ZnuA-like AF_1985 IPR000506 Ketol-acid reductoisomerase, C-terminal AF_1985 IPR014359 Ketol-acid reductoisomerase, prokaryotic AF_1985 IPR013023 Ketol-acid reductoisomerase AF_1985 IPR013116 Ketol-acid reductoisomerase, N-terminal AF_1985 IPR036291 NAD(P)-binding domain superfamily AF_1985 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_1989 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AF_1995 IPR037272 Sodium:neurotransmitter symporter superfamily AF_1995 IPR000175 Sodium:neurotransmitter symporter AF_1998 IPR036197 NarG-like superfamily AF_1998 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_1998 IPR004017 Cysteine-rich domain AF_1998 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_1998 IPR009051 Alpha-helical ferredoxin AF_2000 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site AF_2000 IPR036291 NAD(P)-binding domain superfamily AF_2000 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AF_2000 IPR000043 Adenosylhomocysteinase-like AF_2000 IPR042172 Adenosylhomocysteinase-like superfamily AF_2002 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_2002 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_2002 IPR004839 Aminotransferase, class I/classII AF_2002 IPR005861 Histidinol-phosphate aminotransferase family AF_2002 IPR015424 Pyridoxal phosphate-dependent transferase AF_2004 IPR023523 Histidine decarboxylase, bacteria AF_2004 IPR002129 Pyridoxal phosphate-dependent decarboxylase AF_2004 IPR015424 Pyridoxal phosphate-dependent transferase AF_2004 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_2004 IPR021115 Pyridoxal-phosphate binding site AF_2005 IPR025877 MobA-like NTP transferase AF_2005 IPR013482 Molybdenum cofactor guanylyltransferase AF_2005 IPR029044 Nucleotide-diphospho-sugar transferases AF_2006 IPR013785 Aldolase-type TIM barrel AF_2006 IPR010505 Molybdenum cofactor synthesis C-terminal AF_2006 IPR007197 Radical SAM AF_2006 IPR006638 Elp3/MiaB/NifB AF_2006 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AF_2006 IPR013483 Molybdenum cofactor biosynthesis protein A AF_2007 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AF_2007 IPR024072 Dihydrofolate reductase-like domain superfamily AF_2007 IPR011549 Riboflavin-specific deaminase, C-terminal AF_2007 IPR002125 Cytidine and deoxycytidylate deaminase domain AF_2007 IPR016193 Cytidine deaminase-like AF_2007 IPR004794 Riboflavin biosynthesis protein RibD AF_2009 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria AF_2009 IPR006638 Elp3/MiaB/NifB AF_2009 IPR013785 Aldolase-type TIM barrel AF_2009 IPR023885 4Fe4S-binding SPASM domain AF_2009 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AF_2009 IPR017200 Coenzyme PQQ synthesis protein E AF_2009 IPR007197 Radical SAM AF_2013 IPR000873 AMP-dependent synthetase/ligase AF_2013 IPR028154 AMP-dependent ligase, C-terminal AF_2013 IPR042099 AMP-dependent synthetase-like superfamily AF_2013 IPR011880 Phenylacetate-CoA ligase AF_2014 IPR036259 MFS transporter superfamily AF_2014 IPR004742 Sialic acid transporter AF_2014 IPR011701 Major facilitator superfamily AF_2014 IPR020846 Major facilitator superfamily domain AF_2015 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AF_2015 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AF_2015 IPR012000 Thiamine pyrophosphate enzyme, central domain AF_2015 IPR029061 Thiamin diphosphate-binding fold AF_2015 IPR039368 Acetolactate synthase large subunit, TPP binding domain AF_2015 IPR012846 Acetolactate synthase, large subunit, biosynthetic AF_2015 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_2017 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_2017 IPR029045 ClpP/crotonase-like domain superfamily AF_2017 IPR001753 Enoyl-CoA hydratase/isomerase AF_2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_2017 IPR012799 Fatty oxidation complex, alpha subunit FadB AF_2017 IPR036291 NAD(P)-binding domain superfamily AF_2019 IPR039697 Iron-type alcohol dehydrogenase-like AF_2019 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AF_2019 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AF_2032 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_2032 IPR003594 Histidine kinase/HSP90-like ATPase AF_2032 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_2032 IPR005467 Histidine kinase domain AF_2032 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_2032 IPR000014 PAS domain AF_2032 IPR035965 PAS domain superfamily AF_2032 IPR013767 PAS fold AF_2032 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_2033 IPR025110 AMP-binding enzyme, C-terminal domain AF_2033 IPR042099 AMP-dependent synthetase-like superfamily AF_2033 IPR000873 AMP-dependent synthetase/ligase AF_2033 IPR020845 AMP-binding, conserved site AF_2034 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AF_2034 IPR000994 Peptidase M24 AF_2034 IPR000587 Creatinase, N-terminal AF_2034 IPR036005 Creatinase/aminopeptidase-like AF_2034 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AF_2035 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily AF_2035 IPR015866 Serine-tRNA synthetase, type1, N-terminal AF_2035 IPR002317 Serine-tRNA ligase, type1 AF_2035 IPR006195 Aminoacyl-tRNA synthetase, class II AF_2035 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AF_2035 IPR033729 Serine-tRNA ligase catalytic core domain AF_2035 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AF_2036 IPR000537 UbiA prenyltransferase family AF_2036 IPR006369 Protohaem IX farnesyltransferase AF_2037 IPR000649 Initiation factor 2B-related AF_2037 IPR005251 Methylthioribose-1-phosphate isomerase AF_2037 IPR011559 Initiation factor 2B alpha/beta/delta AF_2037 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal AF_2037 IPR037171 NagB/RpiA transferase-like AF_2039 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_2039 IPR023545 rRNA small subunit methyltransferase F AF_2039 IPR023267 RNA (C5-cytosine) methyltransferase AF_2039 IPR011023 Nop2p AF_2039 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain AF_2039 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AF_2039 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal AF_2039 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AF_2042 IPR015963 Uridylate kinase, bacteria AF_2042 IPR011817 Uridylate kinase AF_2042 IPR001048 Aspartate/glutamate/uridylate kinase AF_2042 IPR036393 Acetylglutamate kinase-like superfamily AF_2044 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase AF_2044 IPR000462 CDP-alcohol phosphatidyltransferase AF_2045 IPR033175 Phosphatidylserine decarboxylase, archaeal-type AF_2045 IPR003817 Phosphatidylserine decarboxylase-related AF_2047 IPR020940 Thymidylate synthase, active site AF_2047 IPR000398 Thymidylate synthase AF_2047 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily AF_2047 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AF_2050 IPR035917 YjbQ-like superfamily AF_2050 IPR001602 Uncharacterised protein family UPF0047 AF_2051 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_2051 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AF_2051 IPR015507 Ribosomal RNA large subunit methyltransferase E AF_2052 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AF_2052 IPR029061 Thiamin diphosphate-binding fold AF_2053 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AF_2053 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AF_2053 IPR029061 Thiamin diphosphate-binding fold AF_2053 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal AF_2054 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_2054 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate AF_2054 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_2056 IPR006312 Sec-independent protein translocase protein TatA/E AF_2056 IPR003369 Sec-independent protein translocase protein TatA/B/E AF_2057 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_2057 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_2057 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_2057 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_2057 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_2057 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_2057 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_2060 IPR003593 AAA+ ATPase domain AF_2060 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2060 IPR003959 ATPase, AAA-type, core AF_2060 IPR011990 Tetratricopeptide-like helical domain superfamily AF_2060 IPR000641 CbxX/CfxQ AF_2060 IPR041627 CbbX, AAA lid domain AF_2060 IPR023835 Type VII secretion system AAA-ATPase, EccA AF_2062 IPR003593 AAA+ ATPase domain AF_2062 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2062 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AF_2062 IPR036225 SRP/SRP receptor, N-terminal AF_2062 IPR013822 Signal recognition particle SRP54, helical bundle AF_2062 IPR004390 Signal-recognition particle receptor FtsY AF_2062 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AF_2071 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AF_2071 IPR000534 Semialdehyde dehydrogenase, NAD-binding AF_2071 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AF_2071 IPR036291 NAD(P)-binding domain superfamily AF_2071 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AF_2073 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like superfamily AF_2073 IPR022667 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal AF_2073 IPR002770 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal AF_2073 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr AF_2074 IPR022998 Thiamine phosphate synthase/TenI AF_2074 IPR036206 Thiamin phosphate synthase superfamily AF_2074 IPR034291 Thiamine phosphate synthase AF_2074 IPR013785 Aldolase-type TIM barrel AF_2075 IPR000417 Hydroxyethylthiazole kinase AF_2075 IPR029056 Ribokinase-like AF_2084 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit AF_2085 IPR000891 Pyruvate carboxyltransferase AF_2085 IPR000089 Biotin/lipoyl attachment AF_2085 IPR003379 Carboxylase, conserved domain AF_2085 IPR011053 Single hybrid motif AF_2085 IPR013785 Aldolase-type TIM barrel AF_2085 IPR001882 Biotin-binding site AF_2089 IPR006204 GHMP kinase N-terminal domain AF_2089 IPR013750 GHMP kinase, C-terminal domain AF_2089 IPR036554 GHMP kinase, C-terminal domain superfamily AF_2089 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase AF_2089 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_2089 IPR020568 Ribosomal protein S5 domain 2-type fold AF_2098 IPR011546 Peptidase M41, FtsH extracellular AF_2098 IPR003593 AAA+ ATPase domain AF_2098 IPR003959 ATPase, AAA-type, core AF_2098 IPR041569 AAA ATPase, AAA+ lid domain AF_2098 IPR005936 Peptidase, FtsH AF_2098 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2098 IPR000642 Peptidase M41 AF_2098 IPR037219 Peptidase M41-like AF_2098 IPR003960 ATPase, AAA-type, conserved site AF_2099 IPR029017 Enolase-like, N-terminal AF_2099 IPR029065 Enolase C-terminal domain-like AF_2099 IPR033978 L-talarate/galactarate dehydratase AF_2099 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AF_2099 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AF_2099 IPR036849 Enolase-like, C-terminal domain superfamily AF_2099 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AF_2100 IPR012000 Thiamine pyrophosphate enzyme, central domain AF_2100 IPR000399 TPP-binding enzyme, conserved site AF_2100 IPR029061 Thiamin diphosphate-binding fold AF_2100 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_2100 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AF_2100 IPR039368 Acetolactate synthase large subunit, TPP binding domain AF_2100 IPR012846 Acetolactate synthase, large subunit, biosynthetic AF_2100 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AF_2101 IPR004627 L-threonine 3-dehydrogenase AF_2101 IPR020843 Polyketide synthase, enoylreductase domain AF_2101 IPR036291 NAD(P)-binding domain superfamily AF_2101 IPR011032 GroES-like superfamily AF_2101 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AF_2101 IPR013149 Alcohol dehydrogenase, C-terminal AF_2101 IPR013154 Alcohol dehydrogenase, N-terminal AF_2109 IPR033463 Single cache domain 3 AF_2109 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_2109 IPR005467 Histidine kinase domain AF_2109 IPR000014 PAS domain AF_2109 IPR035965 PAS domain superfamily AF_2109 IPR003594 Histidine kinase/HSP90-like ATPase AF_2109 IPR013767 PAS fold AF_2109 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AF_2109 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_2109 IPR029151 Periplasmic sensor-like domain superfamily AF_2109 IPR039506 SpoOB, alpha-helical domain AF_2111 IPR002771 Multiple antibiotic resistance (MarC)-related AF_2116 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic AF_2116 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AF_2116 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E AF_2116 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 AF_2116 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit AF_2116 IPR018027 Asn/Gln amidotransferase AF_2116 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site AF_2116 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AF_2116 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AF_2118 IPR000644 CBS domain AF_2118 IPR005857 Cystathionine beta-synthase AF_2118 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AF_2118 IPR001926 Pyridoxal-phosphate dependent enzyme AF_2127 IPR036388 Winged helix-like DNA-binding domain superfamily AF_2127 IPR036390 Winged helix DNA-binding domain superfamily AF_2127 IPR000847 Transcription regulator HTH, LysR AF_2127 IPR005119 LysR, substrate-binding AF_2128 IPR036467 Lumazine/riboflavin synthase superfamily AF_2128 IPR002180 Lumazine/riboflavin synthase AF_2128 IPR034964 Lumazine synthase AF_2129 IPR004839 Aminotransferase, class I/classII AF_2129 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_2129 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_2129 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AF_2129 IPR015424 Pyridoxal phosphate-dependent transferase AF_2136 IPR036388 Winged helix-like DNA-binding domain superfamily AF_2136 IPR036390 Winged helix DNA-binding domain superfamily AF_2136 IPR011991 ArsR-like helix-turn-helix domain AF_2136 IPR001845 HTH ArsR-type DNA-binding domain AF_2137 IPR002524 Cation efflux protein AF_2137 IPR027469 Cation efflux transmembrane domain superfamily AF_2137 IPR027470 Cation efflux protein, cytoplasmic domain AF_2137 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AF_2138 IPR023214 HAD superfamily AF_2138 IPR023190 Phosphoserine phosphatase, domain 2 AF_2138 IPR002912 ACT domain AF_2138 IPR036412 HAD-like superfamily AF_2139 IPR038717 Tc1-like transposase, DDE domain AF_2144 IPR013766 Thioredoxin domain AF_2144 IPR036249 Thioredoxin-like superfamily AF_2144 IPR005746 Thioredoxin AF_2144 IPR017937 Thioredoxin, conserved site AF_2146 IPR005225 Small GTP-binding protein domain AF_2146 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2146 IPR006073 GTP binding domain AF_2146 IPR036726 GTP1/OBG domain superfamily AF_2146 IPR031167 OBG-type guanine nucleotide-binding (G) domain AF_2146 IPR035101 GTP-binding protein, Obg-type AF_2146 IPR014100 GTP-binding protein Obg/CgtA AF_2146 IPR006074 GTP1/OBG, conserved site AF_2146 IPR006169 GTP1/OBG domain AF_2148 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AF_2148 IPR017782 Hydroxyacylglutathione hydrolase AF_2148 IPR001279 Metallo-beta-lactamase AF_2148 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AF_2148 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_2150 IPR023045 Molybdenum cofactor biosynthesis C AF_2150 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily AF_2150 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AF_2151 IPR019916 Isochorismatase, RutB AF_2151 IPR036380 Isochorismatase-like superfamily AF_2151 IPR000868 Isochorismatase-like AF_2153 IPR022877 Protein of unknown funcion UPF0173 AF_2153 IPR001279 Metallo-beta-lactamase AF_2153 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_2155 IPR001279 Metallo-beta-lactamase AF_2155 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_2155 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AF_2155 IPR022712 Beta-Casp domain AF_2157 IPR009097 Cyclic phosphodiesterase AF_2157 IPR014051 Phosphoesterase, HXTX AF_2157 IPR004175 RNA 2',3'-cyclic phosphodiesterase AF_2173 IPR004136 Nitronate monooxygenase AF_2173 IPR013785 Aldolase-type TIM barrel AF_2178 IPR019614 S-adenosylmethionine-dependent methyltransferase AF_2178 IPR000241 Putative RNA methylase domain AF_2178 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AF_2178 IPR017244 Ribosomal RNA large subunit methyltransferase K/L AF_2178 IPR004114 THUMP domain AF_2178 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_2179 IPR003448 Molybdopterin biosynthesis MoaE AF_2179 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily AF_2184 IPR001912 Ribosomal protein S4/S9, N-terminal AF_2184 IPR036986 RNA-binding S4 domain superfamily AF_2184 IPR002942 RNA-binding S4 domain AF_2184 IPR018079 Ribosomal protein S4, conserved site AF_2184 IPR022801 Ribosomal protein S4/S9 AF_2184 IPR005709 Ribosomal protein S4, bacterial-type AF_2185 IPR036291 NAD(P)-binding domain superfamily AF_2185 IPR005810 Succinyl-CoA ligase, alpha subunit AF_2185 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AF_2185 IPR003781 CoA-binding AF_2185 IPR016102 Succinyl-CoA synthetase-like AF_2185 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AF_2185 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AF_2186 IPR016102 Succinyl-CoA synthetase-like AF_2186 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AF_2186 IPR013815 ATP-grasp fold, subdomain 1 AF_2186 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AF_2186 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AF_2186 IPR005809 Succinate--CoA synthetase, beta subunit AF_2186 IPR011761 ATP-grasp fold AF_2192 IPR002541 Cytochrome c assembly protein AF_2192 IPR003568 Cytochrome c-type biogenesis protein CcmF AF_2192 IPR003567 Cytochrome c-type biogenesis protein AF_2192 IPR003570 Cytochrome c-type biogenesis protein NrfE AF_2192 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AF_2194 IPR004498 Ribosomal protein L11 methyltransferase AF_2194 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_2195 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_2195 IPR036982 Deoxyhypusine synthase superfamily AF_2195 IPR002773 Deoxyhypusine synthase AF_2195 IPR023496 Deoxyhypusine synthase-like AF_2196 IPR007565 (5-formylfuran-3-yl)methyl phosphate synthase AF_2196 IPR011060 Ribulose-phosphate binding barrel AF_2199 IPR036008 Aconitase, iron-sulfur domain AF_2199 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AF_2199 IPR018136 Aconitase family, 4Fe-4S cluster binding site AF_2199 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AF_2199 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit AF_2199 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic AF_2199 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AF_2200 IPR000086 NUDIX hydrolase domain AF_2200 IPR015797 NUDIX hydrolase-like domain superfamily AF_2200 IPR024195 NUDIX hydrolase, YfcD, predicted AF_2207 IPR022667 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal AF_2207 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr AF_2207 IPR002770 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal AF_2207 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like superfamily AF_2208 IPR013785 Aldolase-type TIM barrel AF_2208 IPR022998 Thiamine phosphate synthase/TenI AF_2208 IPR034291 Thiamine phosphate synthase AF_2208 IPR004305 Thiaminase-2/PQQC AF_2208 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AF_2208 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AF_2208 IPR016084 Haem oxygenase-like, multi-helical AF_2208 IPR036206 Thiamin phosphate synthase superfamily AF_2208 IPR029056 Ribokinase-like AF_2211 IPR039383 FHIT family AF_2211 IPR001310 Histidine triad (HIT) protein AF_2211 IPR011146 HIT-like domain AF_2211 IPR036265 HIT-like superfamily AF_2216 IPR011053 Single hybrid motif AF_2216 IPR003379 Carboxylase, conserved domain AF_2216 IPR000891 Pyruvate carboxyltransferase AF_2216 IPR000089 Biotin/lipoyl attachment AF_2216 IPR001882 Biotin-binding site AF_2216 IPR013785 Aldolase-type TIM barrel AF_2217 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AF_2217 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AF_2217 IPR029045 ClpP/crotonase-like domain superfamily AF_2217 IPR034733 Acetyl-CoA carboxylase AF_2217 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AF_2218 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AF_2218 IPR018146 Glyoxalase I, conserved site AF_2218 IPR037523 Vicinal oxygen chelate (VOC) domain AF_2218 IPR017515 Methylmalonyl-CoA epimerase AF_2224 IPR002300 Aminoacyl-tRNA synthetase, class Ia AF_2224 IPR014070 Wolbachia palindromic element (WPE) AF_2224 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AF_2224 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AF_2224 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AF_2224 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_2224 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AF_2224 IPR022874 Valine-tRNA ligase, type 2 AF_2224 IPR033705 Valyl tRNA synthetase, anticodon-binding domain AF_2224 IPR002303 Valine-tRNA ligase AF_2225 IPR011234 Fumarylacetoacetase-like, C-terminal AF_2225 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AF_2226 IPR001763 Rhodanese-like domain AF_2226 IPR036873 Rhodanese-like domain superfamily AF_2226 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_2226 IPR026340 Thiazole biosynthesis domain AF_2226 IPR003720 tRNA sulfurtransferase ThiI AF_2226 IPR020536 Thil, AANH domain AF_2226 IPR004114 THUMP domain AF_2228 IPR025526 DsrC-like domain superfamily AF_2228 IPR007453 Sulphur transfer protein DsrC/TusE AF_2228 IPR042072 DsrC-like protein, C-terminal domain AF_2229 IPR011698 CobB/CobQ-like glutamine amidotransferase AF_2229 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA AF_2229 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AF_2229 IPR017929 CobB/CobQ glutamine amidotransferase AF_2229 IPR029062 Class I glutamine amidotransferase-like AF_2229 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2232 IPR002481 Ferric-uptake regulator AF_2232 IPR036388 Winged helix-like DNA-binding domain superfamily AF_2232 IPR036390 Winged helix DNA-binding domain superfamily AF_2233 IPR019794 Peroxidase, active site AF_2233 IPR019793 Peroxidases heam-ligand binding site AF_2233 IPR010255 Haem peroxidase superfamily AF_2233 IPR002016 Haem peroxidase AF_2233 IPR000763 Catalase-peroxidase haem AF_2237 IPR020922 dITP/XTP pyrophosphatase AF_2237 IPR002637 Ham1-like protein AF_2237 IPR029001 Inosine triphosphate pyrophosphatase-like AF_2242 IPR022761 Fumarate lyase, N-terminal AF_2242 IPR008948 L-Aspartase-like AF_2242 IPR004769 Adenylosuccinate lyase AF_2242 IPR000362 Fumarate lyase family AF_2242 IPR020557 Fumarate lyase, conserved site AF_2242 IPR024083 Fumarase/histidase, N-terminal AF_2242 IPR019468 Adenylosuccinate lyase C-terminal AF_2243 IPR020616 Thiolase, N-terminal AF_2243 IPR020617 Thiolase, C-terminal AF_2243 IPR020613 Thiolase, conserved site AF_2243 IPR020615 Thiolase, acyl-enzyme intermediate active site AF_2243 IPR012805 Acetyl-CoA C-acyltransferase FadA AF_2243 IPR020610 Thiolase, active site AF_2243 IPR002155 Thiolase AF_2243 IPR016039 Thiolase-like AF_2244 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_2244 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_2244 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_2244 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_2244 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_2244 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_2244 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_2249 IPR001789 Signal transduction response regulator, receiver domain AF_2249 IPR011006 CheY-like superfamily AF_2250 IPR032466 Metal-dependent hydrolase AF_2250 IPR011059 Metal-dependent hydrolase, composite domain superfamily AF_2250 IPR002195 Dihydroorotase, conserved site AF_2250 IPR004722 Dihydroorotase AF_2250 IPR006680 Amidohydrolase-related AF_2251 IPR036653 CinA-like, C-terminal AF_2251 IPR001453 MoaB/Mog domain AF_2251 IPR036425 MoaB/Mog-like domain superfamily AF_2251 IPR008135 Competence-induced protein CinA AF_2251 IPR041424 CinA, KH domain AF_2251 IPR008136 CinA, C-terminal AF_2252 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AF_2252 IPR018223 Argininosuccinate synthase, conserved site AF_2252 IPR001518 Argininosuccinate synthase AF_2252 IPR023434 Argininosuccinate synthase, type 1 subfamily AF_2252 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_2253 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2253 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain AF_2254 IPR014014 RNA helicase, DEAD-box type, Q motif AF_2254 IPR030880 DEAD-box ATP-dependent RNA helicase CshA AF_2254 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_2254 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2254 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AF_2254 IPR011545 DEAD/DEAH box helicase domain AF_2254 IPR001650 Helicase, C-terminal AF_2255 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AF_2255 IPR002318 Alanine-tRNA ligase, class IIc AF_2255 IPR003156 DHHA1 domain AF_2255 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AF_2255 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AF_2255 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AF_2255 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AF_2255 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AF_2255 IPR009000 Translation protein, beta-barrel domain superfamily AF_2256 IPR029479 Nitroreductase AF_2256 IPR023661 Coenzyme F420:L-glutamate ligase, Actinobacteria AF_2256 IPR019943 Coenzyme F420 biosynthesis protein FbiB, C-terminal AF_2256 IPR002847 Coenzyme F420:L-glutamate ligase-like domain AF_2256 IPR008225 Coenzyme F420:L-glutamate ligase AF_2256 IPR000415 Nitroreductase-like AF_2257 IPR011761 ATP-grasp fold AF_2257 IPR013815 ATP-grasp fold, subdomain 1 AF_2257 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AF_2257 IPR005905 D-alanine--D-alanine ligase AF_2257 IPR011095 D-alanine--D-alanine ligase, C-terminal AF_2257 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AF_2257 IPR016185 Pre-ATP-grasp domain superfamily AF_2258 IPR004638 Drug resistance transporter EmrB-like AF_2258 IPR036259 MFS transporter superfamily AF_2258 IPR020846 Major facilitator superfamily domain AF_2258 IPR011701 Major facilitator superfamily AF_2264 IPR011973 Phenylacetic acid degradation protein PaaD AF_2264 IPR003736 Phenylacetic acid degradation-related domain AF_2264 IPR029069 HotDog domain superfamily AF_2264 IPR006683 Thioesterase domain AF_2265 IPR029062 Class I glutamine amidotransferase-like AF_2265 IPR017926 Glutamine amidotransferase AF_2265 IPR010139 Imidazole glycerol phosphate synthase, subunit H AF_2266 IPR001279 Metallo-beta-lactamase AF_2266 IPR017782 Hydroxyacylglutathione hydrolase AF_2266 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AF_2266 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AF_2266 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_2267 IPR029479 Nitroreductase AF_2267 IPR000415 Nitroreductase-like AF_2267 IPR033878 Nitroreductase NfsB-like AF_2269 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AF_2269 IPR019591 Mrp/NBP35 ATP-binding protein AF_2269 IPR000808 Mrp, conserved site AF_2269 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2273 IPR036291 NAD(P)-binding domain superfamily AF_2273 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AF_2273 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AF_2273 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AF_2273 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AF_2273 IPR022694 3-hydroxyacyl-CoA dehydrogenase AF_2273 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AF_2275 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AF_2275 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AF_2275 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AF_2275 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AF_2275 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AF_2275 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AF_2275 IPR006089 Acyl-CoA dehydrogenase, conserved site AF_2277 IPR036895 Uracil-DNA glycosylase-like domain superfamily AF_2277 IPR005273 Uracil-DNA glycosylase family 4 AF_2277 IPR005122 Uracil-DNA glycosylase-like AF_2281 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 AF_2281 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal AF_2281 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily AF_2281 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal AF_2281 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal AF_2281 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 AF_2283 IPR018102 Ribosomal S11, conserved site AF_2283 IPR036967 Ribosomal protein S11 superfamily AF_2283 IPR001971 Ribosomal protein S11 AF_2283 IPR019981 Ribosomal protein S11, bacterial-type AF_2284 IPR001912 Ribosomal protein S4/S9, N-terminal AF_2284 IPR036986 RNA-binding S4 domain superfamily AF_2284 IPR022801 Ribosomal protein S4/S9 AF_2284 IPR002942 RNA-binding S4 domain AF_2284 IPR018079 Ribosomal protein S4, conserved site AF_2284 IPR005709 Ribosomal protein S4, bacterial-type AF_2285 IPR018269 Ribosomal protein S13, conserved site AF_2285 IPR027437 30s ribosomal protein S13, C-terminal AF_2285 IPR001892 Ribosomal protein S13 AF_2285 IPR010979 Ribosomal protein S13-like, H2TH AF_2285 IPR019980 Ribosomal protein S13, bacterial-type AF_2286 IPR000092 Polyprenyl synthetase AF_2286 IPR033749 Polyprenyl synthetase, conserved site AF_2286 IPR008949 Isoprenoid synthase domain superfamily AF_2288 IPR041727 N-Acetyl-L-glutamate kinase, cyclic AF_2288 IPR036393 Acetylglutamate kinase-like superfamily AF_2288 IPR004662 Acetylglutamate kinase family AF_2288 IPR037528 Acetylglutamate kinase ArgB AF_2288 IPR001048 Aspartate/glutamate/uridylate kinase AF_2288 IPR001057 Glutamate/acetylglutamate kinase AF_2289 IPR000705 Galactokinase AF_2289 IPR022963 Galactokinase, bacterial AF_2289 IPR019741 Galactokinase, conserved site AF_2289 IPR019539 Galactokinase galactose-binding domain AF_2289 IPR013750 GHMP kinase, C-terminal domain AF_2289 IPR036554 GHMP kinase, C-terminal domain superfamily AF_2289 IPR006204 GHMP kinase N-terminal domain AF_2289 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AF_2289 IPR020568 Ribosomal protein S5 domain 2-type fold AF_2289 IPR006206 Mevalonate/galactokinase AF_2289 IPR006203 GHMP kinase, ATP-binding, conserved site AF_2290 IPR023696 Ureohydrolase domain superfamily AF_2290 IPR000286 Histone deacetylase family AF_2290 IPR023801 Histone deacetylase domain AF_2290 IPR037138 Histone deacetylase domain superfamily AF_2295 IPR002129 Pyridoxal phosphate-dependent decarboxylase AF_2295 IPR015424 Pyridoxal phosphate-dependent transferase AF_2295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_2295 IPR021115 Pyridoxal-phosphate binding site AF_2299 IPR005835 Nucleotidyl transferase domain AF_2299 IPR029044 Nucleotide-diphospho-sugar transferases AF_2299 IPR000462 CDP-alcohol phosphatidyltransferase AF_2300 IPR002773 Deoxyhypusine synthase AF_2300 IPR023496 Deoxyhypusine synthase-like AF_2300 IPR036982 Deoxyhypusine synthase superfamily AF_2300 IPR029035 DHS-like NAD/FAD-binding domain superfamily AF_2301 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase AF_2301 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain AF_2301 IPR002724 Pyruvoyl-dependent arginine decarboxylase AF_2303 IPR011761 ATP-grasp fold AF_2303 IPR013651 ATP-grasp fold, RimK-type AF_2303 IPR013815 ATP-grasp fold, subdomain 1 AF_2303 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX AF_2303 IPR041107 RimK, PreATP-grasp domain AF_2303 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AF_2310 IPR002737 MEMO1 family AF_2313 IPR016162 Aldehyde dehydrogenase, N-terminal AF_2313 IPR015590 Aldehyde dehydrogenase domain AF_2313 IPR029069 HotDog domain superfamily AF_2313 IPR002539 MaoC-like dehydratase domain AF_2313 IPR011966 Phenylacetic acid degradation protein PaaN AF_2313 IPR016163 Aldehyde dehydrogenase, C-terminal AF_2313 IPR016161 Aldehyde/histidinol dehydrogenase AF_2314 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AF_2314 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AF_2314 IPR036388 Winged helix-like DNA-binding domain superfamily AF_2314 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AF_2314 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AF_2314 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AF_2314 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AF_2315 IPR015797 NUDIX hydrolase-like domain superfamily AF_2315 IPR020084 NUDIX hydrolase, conserved site AF_2315 IPR000086 NUDIX hydrolase domain AF_2315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_2315 IPR004821 Cytidyltransferase-like domain AF_2315 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain AF_2316 IPR007197 Radical SAM AF_2316 IPR010505 Molybdenum cofactor synthesis C-terminal AF_2316 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AF_2316 IPR013483 Molybdenum cofactor biosynthesis protein A AF_2316 IPR013785 Aldolase-type TIM barrel AF_2316 IPR006638 Elp3/MiaB/NifB AF_2322 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AF_2322 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_2323 IPR003805 Adenosylcobinamide-GDP ribazoletransferase AF_2324 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AF_2324 IPR004573 rRNA small subunit methyltransferase B AF_2324 IPR006027 NusB/RsmB/TIM44 AF_2324 IPR023267 RNA (C5-cytosine) methyltransferase AF_2324 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_2324 IPR035926 NusB-like superfamily AF_2324 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AF_2324 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae AF_2327 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AF_2327 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AF_2327 IPR011342 Shikimate dehydrogenase AF_2327 IPR041121 SDH, C-terminal AF_2327 IPR022893 Shikimate dehydrogenase family AF_2327 IPR036291 NAD(P)-binding domain superfamily AF_2328 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C AF_2328 IPR003837 Glu-tRNAGln amidotransferase C subunit AF_2329 IPR023631 Amidase signature domain AF_2329 IPR020556 Amidase, conserved site AF_2329 IPR000120 Amidase AF_2329 IPR036928 Amidase signature (AS) superfamily AF_2329 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AF_2334 IPR035246 Spermidine synthase, tetramerisation domain AF_2334 IPR037163 Spermidine synthase, tetramerisation domain superfamily AF_2334 IPR030374 Polyamine biosynthesis domain AF_2334 IPR030373 Polyamine biosynthesis domain, conserved site AF_2334 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AF_2334 IPR001045 Spermidine/spermine synthases AF_2336 IPR011053 Single hybrid motif AF_2336 IPR000089 Biotin/lipoyl attachment AF_2336 IPR000073 Alpha/beta hydrolase fold-1 AF_2336 IPR029058 Alpha/Beta hydrolase fold AF_2336 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AF_2350 IPR000330 SNF2-related, N-terminal domain AF_2350 IPR038718 SNF2-like, N-terminal domain superfamily AF_2350 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2350 IPR001650 Helicase, C-terminal AF_2350 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_2363 IPR010074 Phosphoribosylformylglycinamidine subunit PurL AF_2363 IPR010918 PurM-like, C-terminal domain AF_2363 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain AF_2363 IPR016188 PurM-like, N-terminal domain AF_2363 IPR036921 PurM-like, N-terminal domain superfamily AF_2363 IPR036676 PurM-like, C-terminal domain superfamily AF_2364 IPR003593 AAA+ ATPase domain AF_2364 IPR003439 ABC transporter-like AF_2364 IPR010230 FeS cluster assembly SUF system, ATPase SufC AF_2364 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2364 IPR017871 ABC transporter, conserved site AF_2365 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AF_2365 IPR000825 SUF system FeS cluster assembly, SufBD AF_2365 IPR010231 SUF system FeS cluster assembly, SufB AF_2366 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AF_2366 IPR015424 Pyridoxal phosphate-dependent transferase AF_2366 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AF_2366 IPR004839 Aminotransferase, class I/classII AF_2366 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AF_2367 IPR016181 Acyl-CoA N-acyltransferase AF_2367 IPR000182 GNAT domain AF_2367 IPR012772 L-2,4-diaminobutyric acid acetyltransferase AF_2368 IPR025110 AMP-binding enzyme, C-terminal domain AF_2368 IPR020845 AMP-binding, conserved site AF_2368 IPR000873 AMP-dependent synthetase/ligase AF_2368 IPR042099 AMP-dependent synthetase-like superfamily AF_2372 IPR000760 Inositol monophosphatase-like AF_2372 IPR020583 Inositol monophosphatase, metal-binding site AF_2372 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase AF_2373 IPR002504 NAD kinase AF_2373 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal AF_2373 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AF_2373 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AF_2380 IPR019591 Mrp/NBP35 ATP-binding protein AF_2380 IPR000808 Mrp, conserved site AF_2380 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2380 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AF_2382 IPR019591 Mrp/NBP35 ATP-binding protein AF_2382 IPR000808 Mrp, conserved site AF_2382 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AF_2382 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2384 IPR006657 Molybdopterin dinucleotide-binding domain AF_2384 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AF_2384 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AF_2384 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AF_2384 IPR006311 Twin-arginine translocation pathway, signal sequence AF_2384 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AF_2384 IPR006656 Molybdopterin oxidoreductase AF_2384 IPR009010 Aspartate decarboxylase-like domain superfamily AF_2385 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_2385 IPR006311 Twin-arginine translocation pathway, signal sequence AF_2385 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_2388 IPR027469 Cation efflux transmembrane domain superfamily AF_2388 IPR002524 Cation efflux protein AF_2388 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AF_2388 IPR027470 Cation efflux protein, cytoplasmic domain AF_2389-C IPR042099 AMP-dependent synthetase-like superfamily AF_2389-C IPR000873 AMP-dependent synthetase/ligase AF_2389-C IPR020845 AMP-binding, conserved site AF_2389-C IPR025110 AMP-binding enzyme, C-terminal domain AF_2389-C IPR011904 Acetate-CoA ligase AF_2389-C IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AF_2394 IPR041069 FeoB, cytosolic helical domain AF_2394 IPR003373 Ferrous iron transport protein B AF_2394 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2394 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AF_2394 IPR030389 FeoB-type guanine nucleotide-binding (G) domain AF_2394 IPR011640 Ferrous iron transport protein B, C-terminal AF_2395 IPR022687 DTXR-type HTH domain AF_2395 IPR022897 HTH-type transcription regulator MntR AF_2395 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily AF_2395 IPR036388 Winged helix-like DNA-binding domain superfamily AF_2395 IPR036390 Winged helix DNA-binding domain superfamily AF_2395 IPR022689 Iron dependent repressor AF_2395 IPR001367 Iron dependent repressor, metal binding and dimerisation domain AF_2399 IPR029064 50S ribosomal protein L30e-like AF_2399 IPR029028 Alpha/beta knot methyltransferases AF_2399 IPR004441 RNA methyltransferase TrmH family AF_2399 IPR001537 tRNA/rRNA methyltransferase, SpoU type AF_2399 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AF_2399 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AF_2406 IPR014001 Helicase superfamily 1/2, ATP-binding domain AF_2406 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2406 IPR001650 Helicase, C-terminal AF_2406 IPR011545 DEAD/DEAH box helicase domain AF_2406 IPR018973 DEAD/DEAH-box helicase, putative AF_2407 IPR001279 Metallo-beta-lactamase AF_2407 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AF_2409 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AF_2409 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AF_2409 IPR013542 Domain of unknown function DUF1730 AF_2409 IPR004453 Epoxyqueuosine reductase QueG AF_2411 IPR011251 Luciferase-like domain AF_2411 IPR036661 Luciferase-like domain superfamily AF_2412 IPR037509 Phosphomethylpyrimidine synthase AF_2412 IPR038521 ThiC/Bza superfamily AF_2412 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B AF_2413 IPR017200 Coenzyme PQQ synthesis protein E AF_2413 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria AF_2413 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AF_2413 IPR006638 Elp3/MiaB/NifB AF_2413 IPR013785 Aldolase-type TIM barrel AF_2413 IPR023885 4Fe4S-binding SPASM domain AF_2413 IPR007197 Radical SAM AF_2415 IPR016039 Thiolase-like AF_2415 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AF_2415 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AF_2415 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AF_2419 IPR011006 CheY-like superfamily AF_2419 IPR001789 Signal transduction response regulator, receiver domain AF_2420 IPR005467 Histidine kinase domain AF_2420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AF_2420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AF_2420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AF_2420 IPR000014 PAS domain AF_2420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AF_2420 IPR013767 PAS fold AF_2420 IPR003594 Histidine kinase/HSP90-like ATPase AF_2420 IPR035965 PAS domain superfamily AF_2421 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AF_2421 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AF_2421 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AF_2421 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AF_2421 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AF_2421 IPR025709 Leucyl-tRNA synthetase, editing domain AF_2421 IPR002302 Leucine-tRNA ligase AF_2421 IPR002300 Aminoacyl-tRNA synthetase, class Ia AF_2421 IPR015413 Methionyl/Leucyl tRNA synthetase AF_2425 IPR011703 ATPase, AAA-3 AF_2425 IPR027417 P-loop containing nucleoside triphosphate hydrolase AF_2425 IPR041628 ChlI/MoxR, AAA lid domain AF_2429 IPR014748 Enoyl-CoA hydratase, C-terminal AF_2429 IPR001753 Enoyl-CoA hydratase/isomerase AF_2429 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AF_2429 IPR029045 ClpP/crotonase-like domain superfamily AF_2431 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain AF_2431 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase AF_2431 IPR002724 Pyruvoyl-dependent arginine decarboxylase AF_2434 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 AF_2434 IPR021127 CRISPR-associated endonuclease Cas2 AF_2435 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype AF_2435 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain AF_2435 IPR002729 CRISPR-associated protein Cas1 AF_2435 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain