locus-tag class description AA314_00007 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_00007 PF00400 WD domain, G-beta repeat AA314_00009 PF01568 Molydopterin dinucleotide binding domain AA314_00009 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA314_00009 PF00384 Molybdopterin oxidoreductase AA314_00013 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA314_00013 PF18029 Glyoxalase-like domain AA314_00014 PF00933 Glycosyl hydrolase family 3 N terminal domain AA314_00017 PF06505 Activator of aromatic catabolism AA314_00017 PF02830 V4R domain AA314_00017 PF00158 Sigma-54 interaction domain AA314_00017 PF02954 Bacterial regulatory protein, Fis family AA314_00025 PF01510 N-acetylmuramoyl-L-alanine amidase AA314_00027 PF00067 Cytochrome P450 AA314_00028 PF00067 Cytochrome P450 AA314_00035 PF13673 Acetyltransferase (GNAT) domain AA314_00035 PF00583 Acetyltransferase (GNAT) family AA314_00037 PF00005 ABC transporter AA314_00039 PF00005 ABC transporter AA314_00040 PF00392 Bacterial regulatory proteins, gntR family AA314_00053 PF00722 Glycosyl hydrolases family 16 AA314_00054 PF03793 PASTA domain AA314_00054 PF00069 Protein kinase domain AA314_00055 PF00158 Sigma-54 interaction domain AA314_00055 PF01590 GAF domain AA314_00057 PF01476 LysM domain AA314_00057 PF01551 Peptidase family M23 AA314_00059 PF01965 DJ-1/PfpI family AA314_00062 PF00082 Subtilase family AA314_00062 PF05922 Peptidase inhibitor I9 AA314_00068 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AA314_00068 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AA314_00069 PF12833 Helix-turn-helix domain AA314_00070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA314_00073 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_00073 PF00069 Protein kinase domain AA314_00074 PF13286 Phosphohydrolase-associated domain AA314_00074 PF01966 HD domain AA314_00079 PF08281 Sigma-70, region 4 AA314_00079 PF04542 Sigma-70 region 2 AA314_00081 PF06965 Na+/H+ antiporter 1 AA314_00081 PF13462 Thioredoxin AA314_00082 PF00082 Subtilase family AA314_00084 PF01266 FAD dependent oxidoreductase AA314_00084 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AA314_00085 PF00512 His Kinase A (phospho-acceptor) domain AA314_00085 PF09308 LuxQ, periplasmic AA314_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00085 PF00072 Response regulator receiver domain AA314_00087 PF01739 CheR methyltransferase, SAM binding domain AA314_00091 PF11941 Domain of unknown function (DUF3459) AA314_00091 PF00128 Alpha amylase, catalytic domain AA314_00094 PF03951 Glutamine synthetase, beta-Grasp domain AA314_00094 PF00120 Glutamine synthetase, catalytic domain AA314_00095 PF01590 GAF domain AA314_00095 PF02954 Bacterial regulatory protein, Fis family AA314_00095 PF00158 Sigma-54 interaction domain AA314_00098 PF00067 Cytochrome P450 AA314_00099 PF04235 Protein of unknown function (DUF418) AA314_00102 PF01327 Polypeptide deformylase AA314_00112 PF00158 Sigma-54 interaction domain AA314_00112 PF00072 Response regulator receiver domain AA314_00112 PF02954 Bacterial regulatory protein, Fis family AA314_00113 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_00113 PF13191 AAA ATPase domain AA314_00119 PF00512 His Kinase A (phospho-acceptor) domain AA314_00119 PF00989 PAS fold AA314_00119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00123 PF02779 Transketolase, pyrimidine binding domain AA314_00123 PF00456 Transketolase, thiamine diphosphate binding domain AA314_00123 PF02780 Transketolase, C-terminal domain AA314_00129 PF00400 WD domain, G-beta repeat AA314_00129 PF00805 Pentapeptide repeats (8 copies) AA314_00129 PF05729 NACHT domain AA314_00132 PF13417 Glutathione S-transferase, N-terminal domain AA314_00132 PF00043 Glutathione S-transferase, C-terminal domain AA314_00133 PF07690 Major Facilitator Superfamily AA314_00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_00135 PF03466 LysR substrate binding domain AA314_00136 PF07690 Major Facilitator Superfamily AA314_00137 PF00512 His Kinase A (phospho-acceptor) domain AA314_00137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00139 PF09587 Bacterial capsule synthesis protein PGA_cap AA314_00149 PF00072 Response regulator receiver domain AA314_00149 PF00486 Transcriptional regulatory protein, C terminal AA314_00151 PF00155 Aminotransferase class I and II AA314_00157 PF00085 Thioredoxin AA314_00158 PF03466 LysR substrate binding domain AA314_00158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_00161 PF12706 Beta-lactamase superfamily domain AA314_00166 PF01048 Phosphorylase superfamily AA314_00167 PF01008 Initiation factor 2 subunit family AA314_00168 PF00596 Class II Aldolase and Adducin N-terminal domain AA314_00170 PF08448 PAS fold AA314_00170 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AA314_00170 PF00512 His Kinase A (phospho-acceptor) domain AA314_00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00170 PF00672 HAMP domain AA314_00172 PF02374 Anion-transporting ATPase AA314_00173 PF17886 HSP20-like domain found in ArsA AA314_00173 PF02374 Anion-transporting ATPase AA314_00174 PF00571 CBS domain AA314_00180 PF01476 LysM domain AA314_00180 PF05257 CHAP domain AA314_00182 PF04754 Putative transposase, YhgA-like AA314_00183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00183 PF00512 His Kinase A (phospho-acceptor) domain AA314_00183 PF09308 LuxQ, periplasmic AA314_00183 PF00072 Response regulator receiver domain AA314_00187 PF01661 Macro domain AA314_00193 PF04055 Radical SAM superfamily AA314_00193 PF13186 Iron-sulfur cluster-binding domain AA314_00195 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_00195 PF00072 Response regulator receiver domain AA314_00197 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_00197 PF00072 Response regulator receiver domain AA314_00198 PF00512 His Kinase A (phospho-acceptor) domain AA314_00198 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00207 PF03301 Tryptophan 2,3-dioxygenase AA314_00211 PF00561 alpha/beta hydrolase fold AA314_00212 PF01619 Proline dehydrogenase AA314_00220 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_00220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA314_00224 PF08240 Alcohol dehydrogenase GroES-like domain AA314_00224 PF00107 Zinc-binding dehydrogenase AA314_00225 PF01205 Uncharacterized protein family UPF0029 AA314_00225 PF09186 Domain of unknown function (DUF1949) AA314_00226 PF12146 Serine aminopeptidase, S33 AA314_00229 PF13676 TIR domain AA314_00230 PF00106 short chain dehydrogenase AA314_00244 PF13247 4Fe-4S dicluster domain AA314_00244 PF12800 4Fe-4S binding domain AA314_00244 PF09163 Formate dehydrogenase N, transmembrane AA314_00246 PF01565 FAD binding domain AA314_00246 PF02913 FAD linked oxidases, C-terminal domain AA314_00248 PF00069 Protein kinase domain AA314_00248 PF07238 PilZ domain AA314_00253 PF02557 D-alanyl-D-alanine carboxypeptidase AA314_00255 PF00561 alpha/beta hydrolase fold AA314_00259 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_00259 PF03466 LysR substrate binding domain AA314_00260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AA314_00261 PF12804 MobA-like NTP transferase domain AA314_00262 PF03453 MoeA N-terminal region (domain I and II) AA314_00262 PF03454 MoeA C-terminal region (domain IV) AA314_00262 PF00994 Probable molybdopterin binding domain AA314_00263 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AA314_00264 PF02634 FdhD/NarQ family AA314_00265 PF04754 Putative transposase, YhgA-like AA314_00266 PF12706 Beta-lactamase superfamily domain AA314_00268 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AA314_00268 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AA314_00268 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AA314_00268 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AA314_00271 PF00483 Nucleotidyl transferase AA314_00281 PF03435 Saccharopine dehydrogenase NADP binding domain AA314_00284 PF00266 Aminotransferase class-V AA314_00285 PF01627 Hpt domain AA314_00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00285 PF00512 His Kinase A (phospho-acceptor) domain AA314_00285 PF00072 Response regulator receiver domain AA314_00285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_00285 PF00672 HAMP domain AA314_00290 PF00107 Zinc-binding dehydrogenase AA314_00290 PF13823 Alcohol dehydrogenase GroES-associated AA314_00290 PF08240 Alcohol dehydrogenase GroES-like domain AA314_00298 PF00392 Bacterial regulatory proteins, gntR family AA314_00298 PF00155 Aminotransferase class I and II AA314_00299 PF01063 Amino-transferase class IV AA314_00301 PF00378 Enoyl-CoA hydratase/isomerase AA314_00302 PF01047 MarR family AA314_00303 PF00067 Cytochrome P450 AA314_00307 PF01048 Phosphorylase superfamily AA314_00313 PF07726 ATPase family associated with various cellular activities (AAA) AA314_00313 PF17863 AAA lid domain AA314_00315 PF00459 Inositol monophosphatase family AA314_00320 PF01476 LysM domain AA314_00320 PF06725 3D domain AA314_00321 PF16671 Actin cross-linking domain AA314_00321 PF04717 Type VI secretion system, phage-baseplate injector AA314_00325 PF04717 Type VI secretion system, phage-baseplate injector AA314_00330 PF00672 HAMP domain AA314_00330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_00330 PF17202 Single cache domain 3 AA314_00331 PF00248 Aldo/keto reductase family AA314_00332 PF05576 PS-10 peptidase S37 AA314_00335 PF03734 L,D-transpeptidase catalytic domain AA314_00340 PF01070 FMN-dependent dehydrogenase AA314_00342 PF00892 EamA-like transporter family AA314_00349 PF00480 ROK family AA314_00352 PF01916 Deoxyhypusine synthase AA314_00355 PF00069 Protein kinase domain AA314_00355 PF08239 Bacterial SH3 domain AA314_00359 PF00144 Beta-lactamase AA314_00369 PF12706 Beta-lactamase superfamily domain AA314_00377 PF03442 Carbohydrate binding domain X2 AA314_00377 PF00942 Cellulose binding domain AA314_00385 PF00510 Cytochrome c oxidase subunit III AA314_00386 PF00510 Cytochrome c oxidase subunit III AA314_00386 PF00115 Cytochrome C and Quinol oxidase polypeptide I AA314_00387 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AA314_00387 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AA314_00393 PF13247 4Fe-4S dicluster domain AA314_00393 PF00037 4Fe-4S binding domain AA314_00401 PF00571 CBS domain AA314_00402 PF00571 CBS domain AA314_00402 PF02163 Peptidase family M50 AA314_00408 PF03781 Sulfatase-modifying factor enzyme 1 AA314_00408 PF12867 DinB superfamily AA314_00409 PF10017 Histidine-specific methyltransferase, SAM-dependent AA314_00410 PF00392 Bacterial regulatory proteins, gntR family AA314_00410 PF07729 FCD domain AA314_00414 PF13194 Domain of unknown function (DUF4010) AA314_00417 PF02195 ParB-like nuclease domain AA314_00417 PF17762 HTH domain found in ParB protein AA314_00418 PF13614 AAA domain AA314_00420 PF00512 His Kinase A (phospho-acceptor) domain AA314_00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00421 PF02527 rRNA small subunit methyltransferase G AA314_00422 PF01134 Glucose inhibited division protein A AA314_00422 PF13932 GidA associated domain AA314_00423 PF00072 Response regulator receiver domain AA314_00423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00423 PF00512 His Kinase A (phospho-acceptor) domain AA314_00423 PF01627 Hpt domain AA314_00423 PF00672 HAMP domain AA314_00423 PF17149 Periplasmic sensor domain found in signal transduction proteins AA314_00424 PF13407 Periplasmic binding protein domain AA314_00425 PF01209 ubiE/COQ5 methyltransferase family AA314_00430 PF12796 Ankyrin repeats (3 copies) AA314_00432 PF05193 Peptidase M16 inactive domain AA314_00432 PF00675 Insulinase (Peptidase family M16) AA314_00433 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_00435 PF00561 alpha/beta hydrolase fold AA314_00437 PF01343 Peptidase family S49 AA314_00448 PF01926 50S ribosome-binding GTPase AA314_00448 PF12631 MnmE helical domain AA314_00448 PF10396 GTP-binding protein TrmE N-terminus AA314_00452 PF14849 YidC periplasmic domain AA314_00452 PF02096 60Kd inner membrane protein AA314_00453 PF01809 Putative membrane protein insertion efficiency factor AA314_00454 PF00825 Ribonuclease P AA314_00455 PF00468 Ribosomal protein L34 AA314_00456 PF11638 DnaA N-terminal domain AA314_00456 PF08299 Bacterial dnaA protein helix-turn-helix AA314_00456 PF00308 Bacterial dnaA protein AA314_00462 PF11741 AMIN domain AA314_00462 PF03958 Bacterial type II/III secretion system short domain AA314_00462 PF00263 Bacterial type II and III secretion system protein AA314_00462 PF07660 Secretin and TonB N terminus short domain AA314_00467 PF13667 ThiC-associated domain AA314_00467 PF01964 Radical SAM ThiC family AA314_00471 PF00067 Cytochrome P450 AA314_00472 PF01209 ubiE/COQ5 methyltransferase family AA314_00473 PF00989 PAS fold AA314_00473 PF00512 His Kinase A (phospho-acceptor) domain AA314_00473 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00486 PF01638 HxlR-like helix-turn-helix AA314_00487 PF05368 NmrA-like family AA314_00490 PF07690 Major Facilitator Superfamily AA314_00492 PF09587 Bacterial capsule synthesis protein PGA_cap AA314_00499 PF00149 Calcineurin-like phosphoesterase AA314_00504 PF03527 RHS protein AA314_00504 PF05593 RHS Repeat AA314_00506 PF07690 Major Facilitator Superfamily AA314_00507 PF03466 LysR substrate binding domain AA314_00507 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_00508 PF06224 Winged helix DNA-binding domain AA314_00509 PF04754 Putative transposase, YhgA-like AA314_00513 PF00512 His Kinase A (phospho-acceptor) domain AA314_00513 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00513 PF00989 PAS fold AA314_00514 PF05175 Methyltransferase small domain AA314_00515 PF00881 Nitroreductase family AA314_00515 PF01996 F420-0:Gamma-glutamyl ligase AA314_00518 PF03264 NapC/NirT cytochrome c family, N-terminal region AA314_00519 PF02335 Cytochrome c552 AA314_00523 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AA314_00523 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AA314_00528 PF00069 Protein kinase domain AA314_00535 PF00248 Aldo/keto reductase family AA314_00536 PF01641 SelR domain AA314_00538 PF00027 Cyclic nucleotide-binding domain AA314_00538 PF07885 Ion channel AA314_00540 PF00069 Protein kinase domain AA314_00549 PF00360 Phytochrome region AA314_00549 PF08446 PAS fold AA314_00549 PF00512 His Kinase A (phospho-acceptor) domain AA314_00549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00549 PF01590 GAF domain AA314_00554 PF03793 PASTA domain AA314_00554 PF00069 Protein kinase domain AA314_00561 PF00107 Zinc-binding dehydrogenase AA314_00561 PF08240 Alcohol dehydrogenase GroES-like domain AA314_00563 PF00723 Glycosyl hydrolases family 15 AA314_00565 PF05114 Protein of unknown function (DUF692) AA314_00567 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_00567 PF00400 WD domain, G-beta repeat AA314_00569 PF06250 YhcG PDDEXK nuclease domain AA314_00569 PF17761 DUF1016 N-terminal domain AA314_00573 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_00578 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_00578 PF00069 Protein kinase domain AA314_00584 PF02698 DUF218 domain AA314_00593 PF00072 Response regulator receiver domain AA314_00593 PF08448 PAS fold AA314_00593 PF00512 His Kinase A (phospho-acceptor) domain AA314_00593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00593 PF13426 PAS domain AA314_00595 PF00753 Metallo-beta-lactamase superfamily AA314_00596 PF02163 Peptidase family M50 AA314_00598 PF04389 Peptidase family M28 AA314_00603 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA314_00612 PF01810 LysE type translocator AA314_00616 PF01139 tRNA-splicing ligase RtcB AA314_00618 PF03033 Glycosyltransferase family 28 N-terminal domain AA314_00618 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AA314_00620 PF04542 Sigma-70 region 2 AA314_00620 PF04539 Sigma-70 region 3 AA314_00620 PF04545 Sigma-70, region 4 AA314_00622 PF00069 Protein kinase domain AA314_00622 PF03793 PASTA domain AA314_00630 PF17862 AAA+ lid domain AA314_00630 PF01434 Peptidase family M41 AA314_00630 PF00004 ATPase family associated with various cellular activities (AAA) AA314_00636 PF00593 TonB dependent receptor AA314_00636 PF07715 TonB-dependent Receptor Plug Domain AA314_00638 PF03781 Sulfatase-modifying factor enzyme 1 AA314_00642 PF00069 Protein kinase domain AA314_00642 PF03793 PASTA domain AA314_00645 PF01062 Bestrophin, RFP-TM, chloride channel AA314_00646 PF00484 Carbonic anhydrase AA314_00647 PF00326 Prolyl oligopeptidase family AA314_00647 PF07676 WD40-like Beta Propeller Repeat AA314_00651 PF00582 Universal stress protein family AA314_00654 PF01425 Amidase AA314_00655 PF03808 Glycosyl transferase WecB/TagA/CpsF family AA314_00656 PF01757 Acyltransferase family AA314_00663 PF00069 Protein kinase domain AA314_00663 PF03793 PASTA domain AA314_00666 PF00150 Cellulase (glycosyl hydrolase family 5) AA314_00666 PF00942 Cellulose binding domain AA314_00666 PF12891 Glycoside hydrolase family 44 AA314_00667 PF06426 Serine acetyltransferase, N-terminal AA314_00667 PF00132 Bacterial transferase hexapeptide (six repeats) AA314_00671 PF03448 MgtE intracellular N domain AA314_00671 PF00571 CBS domain AA314_00671 PF01769 Divalent cation transporter AA314_00674 PF02397 Bacterial sugar transferase AA314_00676 PF13419 Haloacid dehalogenase-like hydrolase AA314_00677 PF02358 Trehalose-phosphatase AA314_00678 PF02358 Trehalose-phosphatase AA314_00678 PF03636 Glycosyl hydrolase family 65, N-terminal domain AA314_00678 PF03632 Glycosyl hydrolase family 65 central catalytic domain AA314_00678 PF03633 Glycosyl hydrolase family 65, C-terminal domain AA314_00679 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_00679 PF03413 Peptidase propeptide and YPEB domain AA314_00679 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_00679 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_00680 PF00067 Cytochrome P450 AA314_00682 PF00723 Glycosyl hydrolases family 15 AA314_00684 PF01555 DNA methylase AA314_00685 PF05922 Peptidase inhibitor I9 AA314_00685 PF04151 Bacterial pre-peptidase C-terminal domain AA314_00685 PF00082 Subtilase family AA314_00686 PF00550 Phosphopantetheine attachment site AA314_00686 PF14765 Polyketide synthase dehydratase AA314_00686 PF16197 Ketoacyl-synthetase C-terminal extension AA314_00686 PF08659 KR domain AA314_00686 PF08240 Alcohol dehydrogenase GroES-like domain AA314_00686 PF00698 Acyl transferase domain AA314_00686 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_00686 PF08990 Erythronolide synthase docking AA314_00686 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_00687 PF00501 AMP-binding enzyme AA314_00687 PF13193 AMP-binding enzyme C-terminal domain AA314_00689 PF01636 Phosphotransferase enzyme family AA314_00693 PF00291 Pyridoxal-phosphate dependent enzyme AA314_00700 PF04055 Radical SAM superfamily AA314_00700 PF13186 Iron-sulfur cluster-binding domain AA314_00701 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_00701 PF00512 His Kinase A (phospho-acceptor) domain AA314_00701 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00704 PF00534 Glycosyl transferases group 1 AA314_00704 PF13439 Glycosyltransferase Family 4 AA314_00708 PF00672 HAMP domain AA314_00708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00708 PF18698 Histidine kinase sensor domain AA314_00708 PF00512 His Kinase A (phospho-acceptor) domain AA314_00708 PF00989 PAS fold AA314_00709 PF18698 Histidine kinase sensor domain AA314_00709 PF00512 His Kinase A (phospho-acceptor) domain AA314_00709 PF00672 HAMP domain AA314_00709 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00711 PF00390 Malic enzyme, N-terminal domain AA314_00711 PF03949 Malic enzyme, NAD binding domain AA314_00715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_00717 PF13396 Phospholipase_D-nuclease N-terminal AA314_00717 PF13091 PLD-like domain AA314_00721 PF00291 Pyridoxal-phosphate dependent enzyme AA314_00722 PF04229 GrpB protein AA314_00723 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA314_00726 PF08448 PAS fold AA314_00726 PF13426 PAS domain AA314_00726 PF00072 Response regulator receiver domain AA314_00726 PF00512 His Kinase A (phospho-acceptor) domain AA314_00726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00727 PF00512 His Kinase A (phospho-acceptor) domain AA314_00727 PF08448 PAS fold AA314_00727 PF13188 PAS domain AA314_00727 PF00072 Response regulator receiver domain AA314_00733 PF09423 PhoD-like phosphatase AA314_00733 PF16655 PhoD-like phosphatase, N-terminal domain AA314_00735 PF13191 AAA ATPase domain AA314_00735 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_00736 PF04199 Putative cyclase AA314_00737 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA314_00754 PF00534 Glycosyl transferases group 1 AA314_00754 PF13579 Glycosyl transferase 4-like domain AA314_00757 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AA314_00757 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AA314_00759 PF00512 His Kinase A (phospho-acceptor) domain AA314_00759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00762 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00762 PF00672 HAMP domain AA314_00762 PF00512 His Kinase A (phospho-acceptor) domain AA314_00768 PF00561 alpha/beta hydrolase fold AA314_00769 PF01048 Phosphorylase superfamily AA314_00773 PF00106 short chain dehydrogenase AA314_00775 PF00106 short chain dehydrogenase AA314_00778 PF00128 Alpha amylase, catalytic domain AA314_00778 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA314_00783 PF00174 Oxidoreductase molybdopterin binding domain AA314_00789 PF04542 Sigma-70 region 2 AA314_00789 PF08281 Sigma-70, region 4 AA314_00791 PF13977 BetI-type transcriptional repressor, C-terminal AA314_00791 PF00440 Bacterial regulatory proteins, tetR family AA314_00792 PF03055 Retinal pigment epithelial membrane protein AA314_00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00795 PF00512 His Kinase A (phospho-acceptor) domain AA314_00804 PF08447 PAS fold AA314_00804 PF00989 PAS fold AA314_00804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00804 PF00512 His Kinase A (phospho-acceptor) domain AA314_00805 PF00072 Response regulator receiver domain AA314_00805 PF02954 Bacterial regulatory protein, Fis family AA314_00805 PF00158 Sigma-54 interaction domain AA314_00813 PF06167 Glucose-regulated metallo-peptidase M90 AA314_00814 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AA314_00816 PF03435 Saccharopine dehydrogenase NADP binding domain AA314_00817 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_00817 PF00672 HAMP domain AA314_00819 PF04754 Putative transposase, YhgA-like AA314_00820 PF01925 Sulfite exporter TauE/SafE AA314_00821 PF00581 Rhodanese-like domain AA314_00822 PF00753 Metallo-beta-lactamase superfamily AA314_00823 PF02954 Bacterial regulatory protein, Fis family AA314_00823 PF00072 Response regulator receiver domain AA314_00823 PF00158 Sigma-54 interaction domain AA314_00824 PF10518 TAT (twin-arginine translocation) pathway signal sequence AA314_00824 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding AA314_00824 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_00826 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00826 PF00512 His Kinase A (phospho-acceptor) domain AA314_00827 PF13409 Glutathione S-transferase, N-terminal domain AA314_00828 PF07859 alpha/beta hydrolase fold AA314_00836 PF00305 Lipoxygenase AA314_00846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00846 PF00512 His Kinase A (phospho-acceptor) domain AA314_00846 PF08448 PAS fold AA314_00846 PF13188 PAS domain AA314_00846 PF00072 Response regulator receiver domain AA314_00847 PF00672 HAMP domain AA314_00847 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00847 PF00512 His Kinase A (phospho-acceptor) domain AA314_00847 PF13426 PAS domain AA314_00848 PF00672 HAMP domain AA314_00848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00848 PF00512 His Kinase A (phospho-acceptor) domain AA314_00848 PF01627 Hpt domain AA314_00848 PF00072 Response regulator receiver domain AA314_00848 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_00849 PF01272 Transcription elongation factor, GreA/GreB, C-term AA314_00849 PF03449 Transcription elongation factor, N-terminal AA314_00850 PF00581 Rhodanese-like domain AA314_00851 PF07690 Major Facilitator Superfamily AA314_00852 PF00561 alpha/beta hydrolase fold AA314_00854 PF04542 Sigma-70 region 2 AA314_00854 PF12680 SnoaL-like domain AA314_00854 PF08281 Sigma-70, region 4 AA314_00855 PF01790 Prolipoprotein diacylglyceryl transferase AA314_00861 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA314_00861 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA314_00862 PF00501 AMP-binding enzyme AA314_00862 PF13193 AMP-binding enzyme C-terminal domain AA314_00865 PF08386 TAP-like protein AA314_00865 PF00561 alpha/beta hydrolase fold AA314_00876 PF01168 Alanine racemase, N-terminal domain AA314_00876 PF00842 Alanine racemase, C-terminal domain AA314_00878 PF13382 Adenine deaminase C-terminal domain AA314_00878 PF01979 Amidohydrolase family AA314_00881 PF02631 RecX family AA314_00882 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_00882 PF12806 Acetyl-CoA dehydrogenase C-terminal like AA314_00882 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_00882 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_00884 PF08990 Erythronolide synthase docking AA314_00884 PF14765 Polyketide synthase dehydratase AA314_00884 PF16197 Ketoacyl-synthetase C-terminal extension AA314_00884 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_00884 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_00884 PF08659 KR domain AA314_00884 PF00698 Acyl transferase domain AA314_00884 PF00550 Phosphopantetheine attachment site AA314_00884 PF08240 Alcohol dehydrogenase GroES-like domain AA314_00888 PF00501 AMP-binding enzyme AA314_00888 PF13193 AMP-binding enzyme C-terminal domain AA314_00890 PF00672 HAMP domain AA314_00890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_00890 PF17200 Single Cache domain 2 AA314_00892 PF00072 Response regulator receiver domain AA314_00892 PF09308 LuxQ, periplasmic AA314_00892 PF00512 His Kinase A (phospho-acceptor) domain AA314_00892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00893 PF00072 Response regulator receiver domain AA314_00893 PF01627 Hpt domain AA314_00893 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_00893 PF00512 His Kinase A (phospho-acceptor) domain AA314_00893 PF00672 HAMP domain AA314_00893 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00899 PF05114 Protein of unknown function (DUF692) AA314_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00905 PF00512 His Kinase A (phospho-acceptor) domain AA314_00905 PF00989 PAS fold AA314_00905 PF08447 PAS fold AA314_00909 PF01641 SelR domain AA314_00910 PF02768 DNA polymerase III beta subunit, C-terminal domain AA314_00910 PF00712 DNA polymerase III beta subunit, N-terminal domain AA314_00910 PF02767 DNA polymerase III beta subunit, central domain AA314_00912 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00914 PF03793 PASTA domain AA314_00914 PF00069 Protein kinase domain AA314_00915 PF00072 Response regulator receiver domain AA314_00917 PF00440 Bacterial regulatory proteins, tetR family AA314_00917 PF08361 MAATS-type transcriptional repressor, C-terminal region AA314_00918 PF00291 Pyridoxal-phosphate dependent enzyme AA314_00919 PF07804 HipA-like C-terminal domain AA314_00921 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AA314_00925 PF02463 RecF/RecN/SMC N terminal domain AA314_00927 PF01434 Peptidase family M41 AA314_00927 PF17862 AAA+ lid domain AA314_00927 PF00004 ATPase family associated with various cellular activities (AAA) AA314_00929 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_00929 PF03466 LysR substrate binding domain AA314_00934 PF02405 Permease MlaE AA314_00935 PF00005 ABC transporter AA314_00939 PF12833 Helix-turn-helix domain AA314_00939 PF06719 AraC-type transcriptional regulator N-terminus AA314_00940 PF00106 short chain dehydrogenase AA314_00952 PF00723 Glycosyl hydrolases family 15 AA314_00956 PF11838 ERAP1-like C-terminal domain AA314_00956 PF01433 Peptidase family M1 domain AA314_00958 PF00266 Aminotransferase class-V AA314_00966 PF00069 Protein kinase domain AA314_00966 PF03793 PASTA domain AA314_00968 PF00989 PAS fold AA314_00968 PF00512 His Kinase A (phospho-acceptor) domain AA314_00968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00969 PF00072 Response regulator receiver domain AA314_00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00970 PF00512 His Kinase A (phospho-acceptor) domain AA314_00971 PF00486 Transcriptional regulatory protein, C terminal AA314_00971 PF00072 Response regulator receiver domain AA314_00974 PF00986 DNA gyrase B subunit, carboxyl terminus AA314_00974 PF00204 DNA gyrase B AA314_00974 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00974 PF01751 Toprim domain AA314_00975 PF00069 Protein kinase domain AA314_00977 PF00149 Calcineurin-like phosphoesterase AA314_00983 PF00512 His Kinase A (phospho-acceptor) domain AA314_00983 PF00989 PAS fold AA314_00983 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00986 PF02472 Biopolymer transport protein ExbD/TolR AA314_00987 PF02472 Biopolymer transport protein ExbD/TolR AA314_00990 PF07714 Protein tyrosine kinase AA314_00991 PF16198 tRNA pseudouridylate synthase B C-terminal domain AA314_00991 PF01509 TruB family pseudouridylate synthase (N terminal domain) AA314_00992 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_00992 PF00512 His Kinase A (phospho-acceptor) domain AA314_00992 PF00672 HAMP domain AA314_00995 PF13183 4Fe-4S dicluster domain AA314_00995 PF02754 Cysteine-rich domain AA314_01003 PF11412 Disulphide bond corrector protein DsbC AA314_01003 PF02683 Cytochrome C biogenesis protein transmembrane region AA314_01004 PF00578 AhpC/TSA family AA314_01012 PF00158 Sigma-54 interaction domain AA314_01012 PF02954 Bacterial regulatory protein, Fis family AA314_01012 PF00072 Response regulator receiver domain AA314_01013 PF00069 Protein kinase domain AA314_01015 PF00355 Rieske [2Fe-2S] domain AA314_01015 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AA314_01017 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AA314_01017 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AA314_01022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01025 PF00171 Aldehyde dehydrogenase family AA314_01026 PF02954 Bacterial regulatory protein, Fis family AA314_01026 PF00072 Response regulator receiver domain AA314_01026 PF00158 Sigma-54 interaction domain AA314_01029 PF01494 FAD binding domain AA314_01033 PF03167 Uracil DNA glycosylase superfamily AA314_01034 PF01323 DSBA-like thioredoxin domain AA314_01036 PF01048 Phosphorylase superfamily AA314_01038 PF00593 TonB dependent receptor AA314_01039 PF00226 DnaJ domain AA314_01039 PF01556 DnaJ C terminal domain AA314_01039 PF00684 DnaJ central domain AA314_01040 PF00012 Hsp70 protein AA314_01041 PF00069 Protein kinase domain AA314_01044 PF13545 Crp-like helix-turn-helix domain AA314_01044 PF00027 Cyclic nucleotide-binding domain AA314_01045 PF08448 PAS fold AA314_01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01045 PF00072 Response regulator receiver domain AA314_01045 PF13188 PAS domain AA314_01045 PF00512 His Kinase A (phospho-acceptor) domain AA314_01046 PF13180 PDZ domain AA314_01047 PF13180 PDZ domain AA314_01048 PF00072 Response regulator receiver domain AA314_01048 PF00196 Bacterial regulatory proteins, luxR family AA314_01052 PF13344 Haloacid dehalogenase-like hydrolase AA314_01052 PF00293 NUDIX domain AA314_01065 PF00561 alpha/beta hydrolase fold AA314_01068 PF00067 Cytochrome P450 AA314_01078 PF00795 Carbon-nitrogen hydrolase AA314_01079 PF03551 Transcriptional regulator PadR-like family AA314_01081 PF12902 Ferritin-like AA314_01082 PF04679 ATP dependent DNA ligase C terminal region AA314_01082 PF01068 ATP dependent DNA ligase domain AA314_01083 PF04679 ATP dependent DNA ligase C terminal region AA314_01083 PF01068 ATP dependent DNA ligase domain AA314_01083 PF13298 DNA polymerase Ligase (LigD) AA314_01092 PF04055 Radical SAM superfamily AA314_01101 PF00069 Protein kinase domain AA314_01101 PF03793 PASTA domain AA314_01102 PF04389 Peptidase family M28 AA314_01102 PF04151 Bacterial pre-peptidase C-terminal domain AA314_01105 PF00202 Aminotransferase class-III AA314_01108 PF04226 Transglycosylase associated protein AA314_01113 PF13302 Acetyltransferase (GNAT) domain AA314_01114 PF01661 Macro domain AA314_01116 PF01367 5'-3' exonuclease, C-terminal SAM fold AA314_01116 PF00476 DNA polymerase family A AA314_01116 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AA314_01119 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AA314_01123 PF00072 Response regulator receiver domain AA314_01123 PF13426 PAS domain AA314_01123 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01125 PF03009 Glycerophosphoryl diester phosphodiesterase family AA314_01126 PF07676 WD40-like Beta Propeller Repeat AA314_01126 PF00326 Prolyl oligopeptidase family AA314_01127 PF00596 Class II Aldolase and Adducin N-terminal domain AA314_01128 PF03079 ARD/ARD' family AA314_01130 PF02899 Phage integrase, N-terminal SAM-like domain AA314_01130 PF00589 Phage integrase family AA314_01133 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_01133 PF03466 LysR substrate binding domain AA314_01135 PF13188 PAS domain AA314_01135 PF08448 PAS fold AA314_01135 PF00072 Response regulator receiver domain AA314_01135 PF00512 His Kinase A (phospho-acceptor) domain AA314_01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01143 PF00305 Lipoxygenase AA314_01145 PF04070 Domain of unknown function (DUF378) AA314_01146 PF00072 Response regulator receiver domain AA314_01146 PF01627 Hpt domain AA314_01146 PF00512 His Kinase A (phospho-acceptor) domain AA314_01146 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_01146 PF00672 HAMP domain AA314_01146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01159 PF18030 RimK PreATP-grasp domain AA314_01159 PF02080 TrkA-C domain AA314_01159 PF08443 RimK-like ATP-grasp domain AA314_01160 PF00158 Sigma-54 interaction domain AA314_01160 PF00072 Response regulator receiver domain AA314_01160 PF02954 Bacterial regulatory protein, Fis family AA314_01165 PF08264 Anticodon-binding domain of tRNA AA314_01165 PF00133 tRNA synthetases class I (I, L, M and V) AA314_01165 PF06827 Zinc finger found in FPG and IleRS AA314_01166 PF03109 ABC1 family AA314_01168 PF01593 Flavin containing amine oxidoreductase AA314_01169 PF00106 short chain dehydrogenase AA314_01176 PF01252 Signal peptidase (SPase) II AA314_01177 PF01252 Signal peptidase (SPase) II AA314_01178 PF01790 Prolipoprotein diacylglyceryl transferase AA314_01187 PF01047 MarR family AA314_01188 PF03992 Antibiotic biosynthesis monooxygenase AA314_01193 PF00202 Aminotransferase class-III AA314_01194 PF00069 Protein kinase domain AA314_01195 PF01740 STAS domain AA314_01195 PF08678 Rsbr N terminal AA314_01196 PF01740 STAS domain AA314_01197 PF13581 Histidine kinase-like ATPase domain AA314_01199 PF00672 HAMP domain AA314_01199 PF01627 Hpt domain AA314_01199 PF00072 Response regulator receiver domain AA314_01199 PF17149 Periplasmic sensor domain found in signal transduction proteins AA314_01199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01199 PF00512 His Kinase A (phospho-acceptor) domain AA314_01200 PF01627 Hpt domain AA314_01200 PF00512 His Kinase A (phospho-acceptor) domain AA314_01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01200 PF00989 PAS fold AA314_01200 PF00072 Response regulator receiver domain AA314_01200 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_01201 PF01471 Putative peptidoglycan binding domain AA314_01201 PF07486 Cell Wall Hydrolase AA314_01202 PF00248 Aldo/keto reductase family AA314_01206 PF05683 Fumarase C-terminus AA314_01206 PF05681 Fumarate hydratase (Fumerase) AA314_01210 PF12826 Helix-hairpin-helix motif AA314_01210 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AA314_01210 PF03120 NAD-dependent DNA ligase OB-fold domain AA314_01210 PF01653 NAD-dependent DNA ligase adenylation domain AA314_01210 PF00533 BRCA1 C Terminus (BRCT) domain AA314_01211 PF03577 Peptidase family C69 AA314_01214 PF00384 Molybdopterin oxidoreductase AA314_01214 PF01568 Molydopterin dinucleotide binding domain AA314_01217 PF04493 Endonuclease V AA314_01218 PF12146 Serine aminopeptidase, S33 AA314_01224 PF00069 Protein kinase domain AA314_01226 PF01494 FAD binding domain AA314_01227 PF17990 L-Lysine epsilon oxidase N-terminal AA314_01227 PF18417 L-lysine epsilon oxidase C-terminal domain AA314_01233 PF02637 GatB domain AA314_01233 PF00749 tRNA synthetases class I (E and Q), catalytic domain AA314_01233 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AA314_01234 PF00749 tRNA synthetases class I (E and Q), catalytic domain AA314_01234 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AA314_01234 PF02637 GatB domain AA314_01237 PF00743 Flavin-binding monooxygenase-like AA314_01245 PF00528 Binding-protein-dependent transport system inner membrane component AA314_01246 PF00005 ABC transporter AA314_01247 PF00069 Protein kinase domain AA314_01247 PF08308 PEGA domain AA314_01250 PF04542 Sigma-70 region 2 AA314_01250 PF08281 Sigma-70, region 4 AA314_01256 PF00512 His Kinase A (phospho-acceptor) domain AA314_01256 PF00989 PAS fold AA314_01256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01258 PF01161 Phosphatidylethanolamine-binding protein AA314_01259 PF13847 Methyltransferase domain AA314_01266 PF00119 ATP synthase A chain AA314_01268 PF00430 ATP synthase B/B' CF(0) AA314_01269 PF06071 Protein of unknown function (DUF933) AA314_01269 PF01926 50S ribosome-binding GTPase AA314_01271 PF00285 Citrate synthase, C-terminal domain AA314_01275 PF00355 Rieske [2Fe-2S] domain AA314_01278 PF00149 Calcineurin-like phosphoesterase AA314_01283 PF03466 LysR substrate binding domain AA314_01283 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_01284 PF00248 Aldo/keto reductase family AA314_01285 PF00106 short chain dehydrogenase AA314_01290 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_01290 PF13191 AAA ATPase domain AA314_01292 PF09308 LuxQ, periplasmic AA314_01292 PF00512 His Kinase A (phospho-acceptor) domain AA314_01292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01292 PF00072 Response regulator receiver domain AA314_01295 PF01494 FAD binding domain AA314_01296 PF18417 L-lysine epsilon oxidase C-terminal domain AA314_01296 PF17990 L-Lysine epsilon oxidase N-terminal AA314_01297 PF00171 Aldehyde dehydrogenase family AA314_01303 PF01409 tRNA synthetases class II core domain (F) AA314_01303 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AA314_01305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AA314_01305 PF00034 Cytochrome c AA314_01308 PF00067 Cytochrome P450 AA314_01310 PF00082 Subtilase family AA314_01322 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_01322 PF00072 Response regulator receiver domain AA314_01322 PF01627 Hpt domain AA314_01322 PF00512 His Kinase A (phospho-acceptor) domain AA314_01322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01322 PF00672 HAMP domain AA314_01323 PF01627 Hpt domain AA314_01323 PF00672 HAMP domain AA314_01323 PF00512 His Kinase A (phospho-acceptor) domain AA314_01323 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_01323 PF00072 Response regulator receiver domain AA314_01323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01329 PF00989 PAS fold AA314_01329 PF00512 His Kinase A (phospho-acceptor) domain AA314_01329 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01330 PF01557 Fumarylacetoacetate (FAA) hydrolase family AA314_01332 PF00171 Aldehyde dehydrogenase family AA314_01333 PF01042 Endoribonuclease L-PSP AA314_01334 PF06052 3-hydroxyanthranilic acid dioxygenase AA314_01336 PF00266 Aminotransferase class-V AA314_01337 PF01494 FAD binding domain AA314_01339 PF01752 Collagenase AA314_01339 PF08453 Peptidase family M9 N-terminal AA314_01339 PF18496 Collagenase G catalytic helper subdomain AA314_01344 PF12146 Serine aminopeptidase, S33 AA314_01344 PF13026 Protein of unknown function (DUF3887) AA314_01347 PF00342 Phosphoglucose isomerase AA314_01350 PF00072 Response regulator receiver domain AA314_01350 PF02954 Bacterial regulatory protein, Fis family AA314_01350 PF00158 Sigma-54 interaction domain AA314_01351 PF00072 Response regulator receiver domain AA314_01353 PF00400 WD domain, G-beta repeat AA314_01353 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_01355 PF00561 alpha/beta hydrolase fold AA314_01363 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA314_01371 PF00255 Glutathione peroxidase AA314_01374 PF10011 Predicted membrane protein (DUF2254) AA314_01375 PF09587 Bacterial capsule synthesis protein PGA_cap AA314_01382 PF00266 Aminotransferase class-V AA314_01383 PF00550 Phosphopantetheine attachment site AA314_01383 PF00698 Acyl transferase domain AA314_01383 PF08240 Alcohol dehydrogenase GroES-like domain AA314_01383 PF14765 Polyketide synthase dehydratase AA314_01383 PF16197 Ketoacyl-synthetase C-terminal extension AA314_01383 PF08659 KR domain AA314_01383 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_01383 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_01386 PF00723 Glycosyl hydrolases family 15 AA314_01388 PF00005 ABC transporter AA314_01399 PF03423 Carbohydrate binding domain (family 25) AA314_01399 PF00041 Fibronectin type III domain AA314_01399 PF03065 Glycosyl hydrolase family 57 AA314_01412 PF00072 Response regulator receiver domain AA314_01412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01412 PF13188 PAS domain AA314_01412 PF08448 PAS fold AA314_01412 PF00512 His Kinase A (phospho-acceptor) domain AA314_01413 PF01739 CheR methyltransferase, SAM binding domain AA314_01413 PF03705 CheR methyltransferase, all-alpha domain AA314_01413 PF08448 PAS fold AA314_01413 PF01339 CheB methylesterase AA314_01414 PF00072 Response regulator receiver domain AA314_01414 PF00486 Transcriptional regulatory protein, C terminal AA314_01418 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AA314_01419 PF09312 SurA N-terminal domain AA314_01419 PF00639 PPIC-type PPIASE domain AA314_01425 PF01541 GIY-YIG catalytic domain AA314_01426 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01426 PF00512 His Kinase A (phospho-acceptor) domain AA314_01430 PF04055 Radical SAM superfamily AA314_01431 PF09297 NADH pyrophosphatase zinc ribbon domain AA314_01431 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AA314_01431 PF00293 NUDIX domain AA314_01433 PF00664 ABC transporter transmembrane region AA314_01433 PF00005 ABC transporter AA314_01434 PF00664 ABC transporter transmembrane region AA314_01434 PF00005 ABC transporter AA314_01438 PF00069 Protein kinase domain AA314_01439 PF00593 TonB dependent receptor AA314_01439 PF07715 TonB-dependent Receptor Plug Domain AA314_01443 PF00072 Response regulator receiver domain AA314_01443 PF00486 Transcriptional regulatory protein, C terminal AA314_01444 PF00069 Protein kinase domain AA314_01444 PF03793 PASTA domain AA314_01447 PF00691 OmpA family AA314_01447 PF13677 Membrane MotB of proton-channel complex MotA/MotB AA314_01455 PF00501 AMP-binding enzyme AA314_01455 PF13193 AMP-binding enzyme C-terminal domain AA314_01456 PF08546 Ketopantoate reductase PanE/ApbA C terminal AA314_01456 PF02558 Ketopantoate reductase PanE/ApbA AA314_01459 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA314_01460 PF00873 AcrB/AcrD/AcrF family AA314_01461 PF00989 PAS fold AA314_01461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01461 PF16736 Single Cache-like AA314_01461 PF00512 His Kinase A (phospho-acceptor) domain AA314_01466 PF01590 GAF domain AA314_01466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01466 PF00512 His Kinase A (phospho-acceptor) domain AA314_01466 PF00360 Phytochrome region AA314_01466 PF08446 PAS fold AA314_01473 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AA314_01477 PF01131 DNA topoisomerase AA314_01477 PF01751 Toprim domain AA314_01479 PF13396 Phospholipase_D-nuclease N-terminal AA314_01479 PF13091 PLD-like domain AA314_01484 PF01551 Peptidase family M23 AA314_01484 PF01464 Transglycosylase SLT domain AA314_01484 PF10145 Phage-related minor tail protein AA314_01489 PF06689 ClpX C4-type zinc finger AA314_01489 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_01489 PF07724 AAA domain (Cdc48 subfamily) AA314_01490 PF00128 Alpha amylase, catalytic domain AA314_01490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA314_01490 PF11941 Domain of unknown function (DUF3459) AA314_01493 PF00072 Response regulator receiver domain AA314_01493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01493 PF13426 PAS domain AA314_01494 PF00860 Permease family AA314_01495 PF00313 'Cold-shock' DNA-binding domain AA314_01497 PF06745 KaiC AA314_01498 PF07689 KaiB domain AA314_01499 PF04116 Fatty acid hydroxylase superfamily AA314_01500 PF00011 Hsp20/alpha crystallin family AA314_01508 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AA314_01510 PF00578 AhpC/TSA family AA314_01511 PF00144 Beta-lactamase AA314_01511 PF11954 Domain of unknown function (DUF3471) AA314_01512 PF00069 Protein kinase domain AA314_01513 PF01061 ABC-2 type transporter AA314_01514 PF00005 ABC transporter AA314_01515 PF12848 ABC transporter AA314_01515 PF00005 ABC transporter AA314_01522 PF00565 Staphylococcal nuclease homologue AA314_01530 PF00691 OmpA family AA314_01534 PF00005 ABC transporter AA314_01534 PF00571 CBS domain AA314_01535 PF00528 Binding-protein-dependent transport system inner membrane component AA314_01536 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_01536 PF00672 HAMP domain AA314_01538 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AA314_01538 PF02896 PEP-utilising enzyme, TIM barrel domain AA314_01538 PF00391 PEP-utilising enzyme, mobile domain AA314_01542 PF00561 alpha/beta hydrolase fold AA314_01543 PF02146 Sir2 family AA314_01544 PF02628 Cytochrome oxidase assembly protein AA314_01544 PF01040 UbiA prenyltransferase family AA314_01546 PF00072 Response regulator receiver domain AA314_01546 PF00158 Sigma-54 interaction domain AA314_01546 PF02954 Bacterial regulatory protein, Fis family AA314_01550 PF00171 Aldehyde dehydrogenase family AA314_01557 PF01569 PAP2 superfamily AA314_01562 PF00873 AcrB/AcrD/AcrF family AA314_01566 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01566 PF00512 His Kinase A (phospho-acceptor) domain AA314_01566 PF00989 PAS fold AA314_01567 PF00072 Response regulator receiver domain AA314_01567 PF02954 Bacterial regulatory protein, Fis family AA314_01567 PF00158 Sigma-54 interaction domain AA314_01569 PF00132 Bacterial transferase hexapeptide (six repeats) AA314_01570 PF00989 PAS fold AA314_01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01570 PF16736 Single Cache-like AA314_01570 PF00512 His Kinase A (phospho-acceptor) domain AA314_01571 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AA314_01571 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AA314_01573 PF00069 Protein kinase domain AA314_01573 PF07238 PilZ domain AA314_01577 PF00171 Aldehyde dehydrogenase family AA314_01578 PF00440 Bacterial regulatory proteins, tetR family AA314_01580 PF00512 His Kinase A (phospho-acceptor) domain AA314_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01581 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01581 PF00512 His Kinase A (phospho-acceptor) domain AA314_01581 PF08448 PAS fold AA314_01581 PF00072 Response regulator receiver domain AA314_01581 PF13188 PAS domain AA314_01582 PF00072 Response regulator receiver domain AA314_01582 PF13188 PAS domain AA314_01582 PF08448 PAS fold AA314_01582 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01582 PF00512 His Kinase A (phospho-acceptor) domain AA314_01592 PF13614 AAA domain AA314_01598 PF00005 ABC transporter AA314_01607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01607 PF00512 His Kinase A (phospho-acceptor) domain AA314_01608 PF00691 OmpA family AA314_01610 PF00512 His Kinase A (phospho-acceptor) domain AA314_01610 PF00989 PAS fold AA314_01610 PF00672 HAMP domain AA314_01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01614 PF01434 Peptidase family M41 AA314_01614 PF17862 AAA+ lid domain AA314_01614 PF06480 FtsH Extracellular AA314_01614 PF00004 ATPase family associated with various cellular activities (AAA) AA314_01617 PF02566 OsmC-like protein AA314_01619 PF11954 Domain of unknown function (DUF3471) AA314_01619 PF00144 Beta-lactamase AA314_01623 PF02954 Bacterial regulatory protein, Fis family AA314_01623 PF00158 Sigma-54 interaction domain AA314_01623 PF00072 Response regulator receiver domain AA314_01625 PF00069 Protein kinase domain AA314_01627 PF07969 Amidohydrolase family AA314_01633 PF00561 alpha/beta hydrolase fold AA314_01636 PF00753 Metallo-beta-lactamase superfamily AA314_01636 PF12706 Beta-lactamase superfamily domain AA314_01638 PF00440 Bacterial regulatory proteins, tetR family AA314_01639 PF13533 Biotin-lipoyl like AA314_01640 PF00873 AcrB/AcrD/AcrF family AA314_01646 PF00313 'Cold-shock' DNA-binding domain AA314_01649 PF03030 Inorganic H+ pyrophosphatase AA314_01651 PF02667 Short chain fatty acid transporter AA314_01653 PF00069 Protein kinase domain AA314_01653 PF07238 PilZ domain AA314_01655 PF03109 ABC1 family AA314_01656 PF00072 Response regulator receiver domain AA314_01656 PF00486 Transcriptional regulatory protein, C terminal AA314_01657 PF00672 HAMP domain AA314_01657 PF13426 PAS domain AA314_01657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01657 PF00512 His Kinase A (phospho-acceptor) domain AA314_01659 PF00072 Response regulator receiver domain AA314_01659 PF00196 Bacterial regulatory proteins, luxR family AA314_01660 PF00072 Response regulator receiver domain AA314_01660 PF00486 Transcriptional regulatory protein, C terminal AA314_01661 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_01661 PF00512 His Kinase A (phospho-acceptor) domain AA314_01661 PF00672 HAMP domain AA314_01661 PF00072 Response regulator receiver domain AA314_01661 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01661 PF01627 Hpt domain AA314_01664 PF00512 His Kinase A (phospho-acceptor) domain AA314_01664 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01665 PF18339 RapA N-terminal Tudor like domain 1 AA314_01665 PF00176 SNF2 family N-terminal domain AA314_01665 PF12137 RNA polymerase recycling family C-terminal AA314_01665 PF18337 RapA N-terminal Tudor like domain AA314_01665 PF00271 Helicase conserved C-terminal domain AA314_01668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01668 PF00672 HAMP domain AA314_01668 PF00512 His Kinase A (phospho-acceptor) domain AA314_01672 PF00664 ABC transporter transmembrane region AA314_01672 PF00005 ABC transporter AA314_01674 PF00226 DnaJ domain AA314_01674 PF00684 DnaJ central domain AA314_01674 PF01556 DnaJ C terminal domain AA314_01675 PF00005 ABC transporter AA314_01675 PF00664 ABC transporter transmembrane region AA314_01677 PF00069 Protein kinase domain AA314_01678 PF13193 AMP-binding enzyme C-terminal domain AA314_01678 PF00501 AMP-binding enzyme AA314_01678 PF00668 Condensation domain AA314_01678 PF00550 Phosphopantetheine attachment site AA314_01680 PF13193 AMP-binding enzyme C-terminal domain AA314_01680 PF00501 AMP-binding enzyme AA314_01680 PF13193 AMP-binding enzyme C-terminal domain AA314_01680 PF00550 Phosphopantetheine attachment site AA314_01680 PF00668 Condensation domain AA314_01680 PF00501 AMP-binding enzyme AA314_01680 PF00668 Condensation domain AA314_01680 PF00550 Phosphopantetheine attachment site AA314_01688 PF00069 Protein kinase domain AA314_01688 PF07238 PilZ domain AA314_01691 PF00437 Type II/IV secretion system protein AA314_01696 PF03167 Uracil DNA glycosylase superfamily AA314_01699 PF01255 Putative undecaprenyl diphosphate synthase AA314_01700 PF00067 Cytochrome P450 AA314_01704 PF18417 L-lysine epsilon oxidase C-terminal domain AA314_01704 PF17990 L-Lysine epsilon oxidase N-terminal AA314_01705 PF01494 FAD binding domain AA314_01709 PF03989 DNA gyrase C-terminal domain, beta-propeller AA314_01709 PF00521 DNA gyrase/topoisomerase IV, subunit A AA314_01714 PF16884 N-terminal domain of oxidoreductase AA314_01714 PF00107 Zinc-binding dehydrogenase AA314_01715 PF04760 Translation initiation factor IF-2, N-terminal region AA314_01715 PF11987 Translation-initiation factor 2 AA314_01715 PF00009 Elongation factor Tu GTP binding domain AA314_01718 PF13411 MerR HTH family regulatory protein AA314_01723 PF01145 SPFH domain / Band 7 family AA314_01725 PF03575 Peptidase family S51 AA314_01726 PF00534 Glycosyl transferases group 1 AA314_01728 PF07969 Amidohydrolase family AA314_01729 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_01729 PF03466 LysR substrate binding domain AA314_01730 PF13361 UvrD-like helicase C-terminal domain AA314_01730 PF00580 UvrD/REP helicase N-terminal domain AA314_01736 PF01494 FAD binding domain AA314_01739 PF07759 Protein of unknown function (DUF1615) AA314_01740 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_01740 PF03413 Peptidase propeptide and YPEB domain AA314_01740 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_01740 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_01744 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_01744 PF12806 Acetyl-CoA dehydrogenase C-terminal like AA314_01744 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_01744 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_01748 PF00593 TonB dependent receptor AA314_01748 PF07715 TonB-dependent Receptor Plug Domain AA314_01750 PF00360 Phytochrome region AA314_01750 PF08446 PAS fold AA314_01750 PF00512 His Kinase A (phospho-acceptor) domain AA314_01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01750 PF01590 GAF domain AA314_01751 PF00072 Response regulator receiver domain AA314_01752 PF00672 HAMP domain AA314_01752 PF00512 His Kinase A (phospho-acceptor) domain AA314_01752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01761 PF08443 RimK-like ATP-grasp domain AA314_01761 PF08245 Mur ligase middle domain AA314_01761 PF02875 Mur ligase family, glutamate ligase domain AA314_01762 PF01979 Amidohydrolase family AA314_01763 PF03575 Peptidase family S51 AA314_01764 PF03575 Peptidase family S51 AA314_01767 PF00106 short chain dehydrogenase AA314_01771 PF02585 GlcNAc-PI de-N-acetylase AA314_01783 PF02153 Prephenate dehydrogenase AA314_01783 PF01817 Chorismate mutase type II AA314_01787 PF00873 AcrB/AcrD/AcrF family AA314_01788 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA314_01792 PF00067 Cytochrome P450 AA314_01793 PF07690 Major Facilitator Superfamily AA314_01794 PF18029 Glyoxalase-like domain AA314_01797 PF07930 D-aminopeptidase, domain B AA314_01797 PF00144 Beta-lactamase AA314_01798 PF00850 Histone deacetylase domain AA314_01802 PF03466 LysR substrate binding domain AA314_01802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_01809 PF00155 Aminotransferase class I and II AA314_01810 PF01037 Lrp/AsnC ligand binding domain AA314_01823 PF00561 alpha/beta hydrolase fold AA314_01825 PF05139 Erythromycin esterase AA314_01825 PF00156 Phosphoribosyl transferase domain AA314_01827 PF07885 Ion channel AA314_01827 PF00027 Cyclic nucleotide-binding domain AA314_01830 PF04389 Peptidase family M28 AA314_01831 PF01327 Polypeptide deformylase AA314_01834 PF00012 Hsp70 protein AA314_01837 PF00719 Inorganic pyrophosphatase AA314_01839 PF02798 Glutathione S-transferase, N-terminal domain AA314_01839 PF00043 Glutathione S-transferase, C-terminal domain AA314_01840 PF00106 short chain dehydrogenase AA314_01841 PF00210 Ferritin-like domain AA314_01842 PF00561 alpha/beta hydrolase fold AA314_01844 PF10459 Peptidase S46 AA314_01847 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_01850 PF02743 Cache domain AA314_01850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_01850 PF00672 HAMP domain AA314_01857 PF07238 PilZ domain AA314_01857 PF00069 Protein kinase domain AA314_01860 PF01979 Amidohydrolase family AA314_01861 PF00440 Bacterial regulatory proteins, tetR family AA314_01861 PF17932 Tetracyclin repressor-like, C-terminal domain AA314_01862 PF00149 Calcineurin-like phosphoesterase AA314_01863 PF08338 Domain of unknown function (DUF1731) AA314_01863 PF01370 NAD dependent epimerase/dehydratase family AA314_01866 PF01593 Flavin containing amine oxidoreductase AA314_01868 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AA314_01869 PF01593 Flavin containing amine oxidoreductase AA314_01875 PF13411 MerR HTH family regulatory protein AA314_01875 PF02310 B12 binding domain AA314_01876 PF02310 B12 binding domain AA314_01876 PF13411 MerR HTH family regulatory protein AA314_01876 PF02607 B12 binding domain AA314_01880 PF00854 POT family AA314_01881 PF00205 Thiamine pyrophosphate enzyme, central domain AA314_01881 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AA314_01881 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA314_01884 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AA314_01885 PF06969 HemN C-terminal domain AA314_01885 PF04055 Radical SAM superfamily AA314_01888 PF07690 Major Facilitator Superfamily AA314_01889 PF00571 CBS domain AA314_01889 PF00478 IMP dehydrogenase / GMP reductase domain AA314_01892 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AA314_01892 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AA314_01893 PF09844 Uncharacterized conserved protein (COG2071) AA314_01895 PF00069 Protein kinase domain AA314_01896 PF00512 His Kinase A (phospho-acceptor) domain AA314_01896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01899 PF07238 PilZ domain AA314_01899 PF00069 Protein kinase domain AA314_01902 PF00501 AMP-binding enzyme AA314_01904 PF00756 Putative esterase AA314_01905 PF00107 Zinc-binding dehydrogenase AA314_01905 PF08240 Alcohol dehydrogenase GroES-like domain AA314_01908 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_01908 PF03466 LysR substrate binding domain AA314_01909 PF00069 Protein kinase domain AA314_01909 PF03793 PASTA domain AA314_01912 PF13193 AMP-binding enzyme C-terminal domain AA314_01912 PF00501 AMP-binding enzyme AA314_01915 PF00361 Proton-conducting membrane transporter AA314_01916 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AA314_01916 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AA314_01916 PF00361 Proton-conducting membrane transporter AA314_01917 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AA314_01918 PF00916 Sulfate permease family AA314_01918 PF01740 STAS domain AA314_01919 PF08281 Sigma-70, region 4 AA314_01919 PF04542 Sigma-70 region 2 AA314_01921 PF08448 PAS fold AA314_01921 PF00072 Response regulator receiver domain AA314_01921 PF00512 His Kinase A (phospho-acceptor) domain AA314_01921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_01921 PF13188 PAS domain AA314_01922 PF00158 Sigma-54 interaction domain AA314_01922 PF00072 Response regulator receiver domain AA314_01922 PF02954 Bacterial regulatory protein, Fis family AA314_01924 PF00860 Permease family AA314_01925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AA314_01926 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_01926 PF01799 [2Fe-2S] binding domain AA314_01928 PF00266 Aminotransferase class-V AA314_01930 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AA314_01930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AA314_01931 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AA314_01932 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AA314_01932 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AA314_01934 PF00069 Protein kinase domain AA314_01938 PF00400 WD domain, G-beta repeat AA314_01938 PF05729 NACHT domain AA314_01938 PF00805 Pentapeptide repeats (8 copies) AA314_01941 PF12679 ABC-2 family transporter protein AA314_01942 PF00005 ABC transporter AA314_01948 PF02913 FAD linked oxidases, C-terminal domain AA314_01948 PF01565 FAD binding domain AA314_01951 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AA314_01951 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AA314_01954 PF01820 D-ala D-ala ligase N-terminus AA314_01954 PF07478 D-ala D-ala ligase C-terminus AA314_01957 PF00149 Calcineurin-like phosphoesterase AA314_01965 PF02567 Phenazine biosynthesis-like protein AA314_01966 PF00149 Calcineurin-like phosphoesterase AA314_01966 PF12320 Type 5 capsule protein repressor C-terminal domain AA314_01973 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_01976 PF12706 Beta-lactamase superfamily domain AA314_01983 PF00857 Isochorismatase family AA314_01984 PF01037 Lrp/AsnC ligand binding domain AA314_01989 PF00440 Bacterial regulatory proteins, tetR family AA314_01990 PF12697 Alpha/beta hydrolase family AA314_02004 PF13676 TIR domain AA314_02007 PF00005 ABC transporter AA314_02008 PF13472 GDSL-like Lipase/Acylhydrolase family AA314_02010 PF00743 Flavin-binding monooxygenase-like AA314_02012 PF00106 short chain dehydrogenase AA314_02021 PF01047 MarR family AA314_02024 PF07690 Major Facilitator Superfamily AA314_02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_02025 PF03466 LysR substrate binding domain AA314_02026 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AA314_02028 PF01584 CheW-like domain AA314_02028 PF09078 CheY binding AA314_02028 PF02895 Signal transducing histidine kinase, homodimeric domain AA314_02028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02028 PF01627 Hpt domain AA314_02030 PF00072 Response regulator receiver domain AA314_02030 PF00486 Transcriptional regulatory protein, C terminal AA314_02031 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_02031 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA314_02036 PF10851 Protein of unknown function (DUF2652) AA314_02037 PF04945 YHS domain AA314_02038 PF03150 Di-haem cytochrome c peroxidase AA314_02038 PF00034 Cytochrome c AA314_02042 PF00355 Rieske [2Fe-2S] domain AA314_02045 PF01965 DJ-1/PfpI family AA314_02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_02050 PF03466 LysR substrate binding domain AA314_02054 PF01494 FAD binding domain AA314_02055 PF08494 DEAD/H associated AA314_02055 PF00270 DEAD/DEAH box helicase AA314_02055 PF00271 Helicase conserved C-terminal domain AA314_02059 PF00528 Binding-protein-dependent transport system inner membrane component AA314_02060 PF00528 Binding-protein-dependent transport system inner membrane component AA314_02061 PF00005 ABC transporter AA314_02061 PF17912 MalK OB fold domain AA314_02062 PF00005 ABC transporter AA314_02062 PF17912 MalK OB fold domain AA314_02064 PF04151 Bacterial pre-peptidase C-terminal domain AA314_02064 PF00082 Subtilase family AA314_02066 PF01590 GAF domain AA314_02066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02066 PF00512 His Kinase A (phospho-acceptor) domain AA314_02066 PF08446 PAS fold AA314_02066 PF00360 Phytochrome region AA314_02067 PF00072 Response regulator receiver domain AA314_02068 PF00512 His Kinase A (phospho-acceptor) domain AA314_02068 PF07689 KaiB domain AA314_02068 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02074 PF08308 PEGA domain AA314_02074 PF00069 Protein kinase domain AA314_02078 PF00528 Binding-protein-dependent transport system inner membrane component AA314_02093 PF00571 CBS domain AA314_02097 PF01546 Peptidase family M20/M25/M40 AA314_02097 PF07687 Peptidase dimerisation domain AA314_02099 PF07694 5TMR of 5TMR-LYT AA314_02099 PF00990 Diguanylate cyclase, GGDEF domain AA314_02101 PF13677 Membrane MotB of proton-channel complex MotA/MotB AA314_02101 PF00691 OmpA family AA314_02104 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system AA314_02107 PF00271 Helicase conserved C-terminal domain AA314_02107 PF02559 CarD-like/TRCF domain AA314_02107 PF00270 DEAD/DEAH box helicase AA314_02107 PF17757 UvrB interaction domain AA314_02107 PF03461 TRCF domain AA314_02112 PF00543 Nitrogen regulatory protein P-II AA314_02113 PF00398 Ribosomal RNA adenine dimethylase AA314_02114 PF13614 AAA domain AA314_02118 PF01757 Acyltransferase family AA314_02120 PF13439 Glycosyltransferase Family 4 AA314_02120 PF00534 Glycosyl transferases group 1 AA314_02123 PF13439 Glycosyltransferase Family 4 AA314_02131 PF13579 Glycosyl transferase 4-like domain AA314_02131 PF00534 Glycosyl transferases group 1 AA314_02132 PF00953 Glycosyl transferase family 4 AA314_02137 PF04235 Protein of unknown function (DUF418) AA314_02139 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AA314_02139 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AA314_02139 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AA314_02141 PF00400 WD domain, G-beta repeat AA314_02141 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_02144 PF12697 Alpha/beta hydrolase family AA314_02145 PF00106 short chain dehydrogenase AA314_02150 PF04996 Succinylarginine dihydrolase AA314_02151 PF03279 Bacterial lipid A biosynthesis acyltransferase AA314_02154 PF00005 ABC transporter AA314_02154 PF12399 Branched-chain amino acid ATP-binding cassette transporter AA314_02155 PF00309 Sigma-54 factor, Activator interacting domain (AID) AA314_02155 PF04963 Sigma-54 factor, core binding domain AA314_02155 PF04552 Sigma-54, DNA binding domain AA314_02157 PF13439 Glycosyltransferase Family 4 AA314_02158 PF16884 N-terminal domain of oxidoreductase AA314_02158 PF00107 Zinc-binding dehydrogenase AA314_02162 PF00294 pfkB family carbohydrate kinase AA314_02167 PF09286 Pro-kumamolisin, activation domain AA314_02167 PF04151 Bacterial pre-peptidase C-terminal domain AA314_02185 PF01476 LysM domain AA314_02185 PF05257 CHAP domain AA314_02188 PF00043 Glutathione S-transferase, C-terminal domain AA314_02188 PF13417 Glutathione S-transferase, N-terminal domain AA314_02193 PF00069 Protein kinase domain AA314_02204 PF00264 Common central domain of tyrosinase AA314_02214 PF00069 Protein kinase domain AA314_02214 PF03793 PASTA domain AA314_02215 PF00067 Cytochrome P450 AA314_02220 PF00069 Protein kinase domain AA314_02220 PF03793 PASTA domain AA314_02221 PF03793 PASTA domain AA314_02221 PF00069 Protein kinase domain AA314_02223 PF00413 Matrixin AA314_02233 PF12833 Helix-turn-helix domain AA314_02234 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02234 PF00989 PAS fold AA314_02234 PF00512 His Kinase A (phospho-acceptor) domain AA314_02236 PF00512 His Kinase A (phospho-acceptor) domain AA314_02236 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02238 PF00989 PAS fold AA314_02238 PF00512 His Kinase A (phospho-acceptor) domain AA314_02238 PF18698 Histidine kinase sensor domain AA314_02238 PF00672 HAMP domain AA314_02238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02239 PF08448 PAS fold AA314_02239 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AA314_02239 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02239 PF00512 His Kinase A (phospho-acceptor) domain AA314_02239 PF00672 HAMP domain AA314_02240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AA314_02240 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AA314_02241 PF01915 Glycosyl hydrolase family 3 C-terminal domain AA314_02241 PF00933 Glycosyl hydrolase family 3 N terminal domain AA314_02243 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AA314_02243 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AA314_02244 PF02580 D-Tyr-tRNA(Tyr) deacylase AA314_02246 PF07238 PilZ domain AA314_02246 PF00069 Protein kinase domain AA314_02256 PF00436 Single-strand binding protein family AA314_02257 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AA314_02258 PF01430 Hsp33 protein AA314_02259 PF00156 Phosphoribosyl transferase domain AA314_02260 PF03144 Elongation factor Tu domain 2 AA314_02260 PF09106 Elongation factor SelB, winged helix AA314_02260 PF09107 Elongation factor SelB, winged helix AA314_02260 PF00009 Elongation factor Tu GTP binding domain AA314_02261 PF00512 His Kinase A (phospho-acceptor) domain AA314_02261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02262 PF02954 Bacterial regulatory protein, Fis family AA314_02262 PF00072 Response regulator receiver domain AA314_02262 PF00158 Sigma-54 interaction domain AA314_02263 PF00583 Acetyltransferase (GNAT) family AA314_02264 PF00361 Proton-conducting membrane transporter AA314_02265 PF00361 Proton-conducting membrane transporter AA314_02266 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AA314_02266 PF00361 Proton-conducting membrane transporter AA314_02267 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AA314_02268 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AA314_02269 PF10531 SLBB domain AA314_02269 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AA314_02269 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AA314_02271 PF00072 Response regulator receiver domain AA314_02272 PF00069 Protein kinase domain AA314_02272 PF03793 PASTA domain AA314_02277 PF00011 Hsp20/alpha crystallin family AA314_02278 PF00072 Response regulator receiver domain AA314_02278 PF00486 Transcriptional regulatory protein, C terminal AA314_02280 PF00793 DAHP synthetase I family AA314_02281 PF00117 Glutamine amidotransferase class-I AA314_02281 PF06418 CTP synthase N-terminus AA314_02283 PF00005 ABC transporter AA314_02283 PF00664 ABC transporter transmembrane region AA314_02284 PF02348 Cytidylyltransferase AA314_02285 PF02350 UDP-N-acetylglucosamine 2-epimerase AA314_02286 PF00158 Sigma-54 interaction domain AA314_02286 PF02954 Bacterial regulatory protein, Fis family AA314_02286 PF00072 Response regulator receiver domain AA314_02287 PF00069 Protein kinase domain AA314_02291 PF00849 RNA pseudouridylate synthase AA314_02292 PF17149 Periplasmic sensor domain found in signal transduction proteins AA314_02292 PF00072 Response regulator receiver domain AA314_02292 PF00672 HAMP domain AA314_02292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02292 PF00512 His Kinase A (phospho-acceptor) domain AA314_02292 PF01627 Hpt domain AA314_02293 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_02293 PF00069 Protein kinase domain AA314_02303 PF01435 Peptidase family M48 AA314_02310 PF00156 Phosphoribosyl transferase domain AA314_02312 PF01985 CRS1 / YhbY (CRM) domain AA314_02313 PF00226 DnaJ domain AA314_02313 PF01556 DnaJ C terminal domain AA314_02315 PF01925 Sulfite exporter TauE/SafE AA314_02317 PF04616 Glycosyl hydrolases family 43 AA314_02320 PF01642 Methylmalonyl-CoA mutase AA314_02321 PF01642 Methylmalonyl-CoA mutase AA314_02321 PF02310 B12 binding domain AA314_02323 PF00364 Biotin-requiring enzyme AA314_02323 PF02436 Conserved carboxylase domain AA314_02323 PF00682 HMGL-like AA314_02324 PF02785 Biotin carboxylase C-terminal domain AA314_02324 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA314_02324 PF00289 Biotin carboxylase, N-terminal domain AA314_02326 PF01039 Carboxyl transferase domain AA314_02329 PF00561 alpha/beta hydrolase fold AA314_02330 PF01432 Peptidase family M3 AA314_02336 PF01975 Survival protein SurE AA314_02339 PF06974 Protein of unknown function (DUF1298) AA314_02339 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AA314_02341 PF00069 Protein kinase domain AA314_02344 PF03193 RsgA GTPase AA314_02346 PF01809 Putative membrane protein insertion efficiency factor AA314_02348 PF00072 Response regulator receiver domain AA314_02348 PF00158 Sigma-54 interaction domain AA314_02348 PF02954 Bacterial regulatory protein, Fis family AA314_02352 PF00158 Sigma-54 interaction domain AA314_02352 PF00072 Response regulator receiver domain AA314_02352 PF02954 Bacterial regulatory protein, Fis family AA314_02354 PF03793 PASTA domain AA314_02354 PF00069 Protein kinase domain AA314_02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02355 PF00512 His Kinase A (phospho-acceptor) domain AA314_02358 PF06271 RDD family AA314_02360 PF04452 RNA methyltransferase AA314_02364 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_02372 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA314_02373 PF05193 Peptidase M16 inactive domain AA314_02373 PF00675 Insulinase (Peptidase family M16) AA314_02376 PF06969 HemN C-terminal domain AA314_02376 PF04055 Radical SAM superfamily AA314_02380 PF05736 OprF membrane domain AA314_02380 PF00691 OmpA family AA314_02383 PF00512 His Kinase A (phospho-acceptor) domain AA314_02383 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02383 PF00672 HAMP domain AA314_02383 PF13426 PAS domain AA314_02385 PF00067 Cytochrome P450 AA314_02391 PF00106 short chain dehydrogenase AA314_02392 PF02082 Transcriptional regulator AA314_02393 PF01458 Uncharacterized protein family (UPF0051) AA314_02394 PF00005 ABC transporter AA314_02395 PF01458 Uncharacterized protein family (UPF0051) AA314_02396 PF00266 Aminotransferase class-V AA314_02397 PF01592 NifU-like N terminal domain AA314_02398 PF01883 Iron-sulfur cluster assembly protein AA314_02401 PF00378 Enoyl-CoA hydratase/isomerase AA314_02402 PF10503 Esterase PHB depolymerase AA314_02403 PF05198 Translation initiation factor IF-3, N-terminal domain AA314_02403 PF00707 Translation initiation factor IF-3, C-terminal domain AA314_02406 PF00069 Protein kinase domain AA314_02406 PF03793 PASTA domain AA314_02407 PF09382 RQC domain AA314_02407 PF16124 RecQ zinc-binding AA314_02407 PF00570 HRDC domain AA314_02407 PF00271 Helicase conserved C-terminal domain AA314_02407 PF00270 DEAD/DEAH box helicase AA314_02410 PF03062 MBOAT, membrane-bound O-acyltransferase family AA314_02411 PF00440 Bacterial regulatory proteins, tetR family AA314_02411 PF08362 YcdC-like protein, C-terminal region AA314_02412 PF12704 MacB-like periplasmic core domain AA314_02412 PF00005 ABC transporter AA314_02412 PF02687 FtsX-like permease family AA314_02413 PF12704 MacB-like periplasmic core domain AA314_02413 PF02687 FtsX-like permease family AA314_02413 PF00005 ABC transporter AA314_02416 PF12704 MacB-like periplasmic core domain AA314_02416 PF02687 FtsX-like permease family AA314_02416 PF00005 ABC transporter AA314_02419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02419 PF00512 His Kinase A (phospho-acceptor) domain AA314_02420 PF00072 Response regulator receiver domain AA314_02420 PF02954 Bacterial regulatory protein, Fis family AA314_02420 PF00158 Sigma-54 interaction domain AA314_02421 PF00072 Response regulator receiver domain AA314_02421 PF00158 Sigma-54 interaction domain AA314_02421 PF02954 Bacterial regulatory protein, Fis family AA314_02422 PF01894 Uncharacterised protein family UPF0047 AA314_02424 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AA314_02431 PF01266 FAD dependent oxidoreductase AA314_02434 PF02522 Aminoglycoside 3-N-acetyltransferase AA314_02443 PF03793 PASTA domain AA314_02443 PF00069 Protein kinase domain AA314_02447 PF14759 Reductase C-terminal AA314_02447 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_02448 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_02449 PF00067 Cytochrome P450 AA314_02450 PF07690 Major Facilitator Superfamily AA314_02454 PF00067 Cytochrome P450 AA314_02460 PF00753 Metallo-beta-lactamase superfamily AA314_02466 PF00501 AMP-binding enzyme AA314_02467 PF00067 Cytochrome P450 AA314_02468 PF00202 Aminotransferase class-III AA314_02468 PF00550 Phosphopantetheine attachment site AA314_02468 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_02468 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_02468 PF00501 AMP-binding enzyme AA314_02468 PF16197 Ketoacyl-synthetase C-terminal extension AA314_02468 PF13193 AMP-binding enzyme C-terminal domain AA314_02468 PF00668 Condensation domain AA314_02469 PF00668 Condensation domain AA314_02469 PF13193 AMP-binding enzyme C-terminal domain AA314_02469 PF00501 AMP-binding enzyme AA314_02469 PF07993 Male sterility protein AA314_02469 PF00550 Phosphopantetheine attachment site AA314_02475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_02475 PF03466 LysR substrate binding domain AA314_02477 PF00158 Sigma-54 interaction domain AA314_02477 PF02954 Bacterial regulatory protein, Fis family AA314_02477 PF00072 Response regulator receiver domain AA314_02479 PF08446 PAS fold AA314_02479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02479 PF00360 Phytochrome region AA314_02479 PF01590 GAF domain AA314_02482 PF00672 HAMP domain AA314_02482 PF00512 His Kinase A (phospho-acceptor) domain AA314_02482 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02485 PF00982 Glycosyltransferase family 20 AA314_02487 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02487 PF00512 His Kinase A (phospho-acceptor) domain AA314_02492 PF00365 Phosphofructokinase AA314_02493 PF13188 PAS domain AA314_02493 PF00072 Response regulator receiver domain AA314_02493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02493 PF00512 His Kinase A (phospho-acceptor) domain AA314_02493 PF08448 PAS fold AA314_02494 PF02798 Glutathione S-transferase, N-terminal domain AA314_02494 PF00043 Glutathione S-transferase, C-terminal domain AA314_02495 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AA314_02495 PF01676 Metalloenzyme superfamily AA314_02498 PF02590 Predicted SPOUT methyltransferase AA314_02500 PF00171 Aldehyde dehydrogenase family AA314_02505 PF02954 Bacterial regulatory protein, Fis family AA314_02505 PF00158 Sigma-54 interaction domain AA314_02505 PF00072 Response regulator receiver domain AA314_02507 PF04754 Putative transposase, YhgA-like AA314_02508 PF00144 Beta-lactamase AA314_02509 PF00248 Aldo/keto reductase family AA314_02511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02511 PF00512 His Kinase A (phospho-acceptor) domain AA314_02511 PF07689 KaiB domain AA314_02512 PF00072 Response regulator receiver domain AA314_02513 PF01590 GAF domain AA314_02513 PF00360 Phytochrome region AA314_02513 PF08446 PAS fold AA314_02513 PF00512 His Kinase A (phospho-acceptor) domain AA314_02513 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02514 PF00512 His Kinase A (phospho-acceptor) domain AA314_02514 PF00989 PAS fold AA314_02517 PF18073 Rubredoxin metal binding domain AA314_02519 PF06968 Biotin and Thiamin Synthesis associated domain AA314_02519 PF04055 Radical SAM superfamily AA314_02520 PF00155 Aminotransferase class I and II AA314_02523 PF00155 Aminotransferase class I and II AA314_02525 PF00072 Response regulator receiver domain AA314_02526 PF03169 OPT oligopeptide transporter protein AA314_02527 PF01494 FAD binding domain AA314_02528 PF02743 Cache domain AA314_02528 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_02528 PF00672 HAMP domain AA314_02530 PF00550 Phosphopantetheine attachment site AA314_02530 PF14765 Polyketide synthase dehydratase AA314_02530 PF08659 KR domain AA314_02530 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_02530 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_02530 PF16197 Ketoacyl-synthetase C-terminal extension AA314_02532 PF08659 KR domain AA314_02532 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_02532 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_02532 PF16197 Ketoacyl-synthetase C-terminal extension AA314_02532 PF00550 Phosphopantetheine attachment site AA314_02532 PF00698 Acyl transferase domain AA314_02533 PF07963 Prokaryotic N-terminal methylation motif AA314_02533 PF08334 Type II secretion system (T2SS), protein G AA314_02537 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AA314_02537 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AA314_02538 PF02080 TrkA-C domain AA314_02538 PF03600 Citrate transporter AA314_02543 PF00749 tRNA synthetases class I (E and Q), catalytic domain AA314_02545 PF00512 His Kinase A (phospho-acceptor) domain AA314_02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02546 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02546 PF00512 His Kinase A (phospho-acceptor) domain AA314_02546 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_02546 PF00072 Response regulator receiver domain AA314_02546 PF00989 PAS fold AA314_02546 PF01627 Hpt domain AA314_02548 PF01494 FAD binding domain AA314_02549 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_02549 PF00512 His Kinase A (phospho-acceptor) domain AA314_02549 PF01627 Hpt domain AA314_02549 PF00072 Response regulator receiver domain AA314_02549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02549 PF00672 HAMP domain AA314_02551 PF04055 Radical SAM superfamily AA314_02555 PF07694 5TMR of 5TMR-LYT AA314_02555 PF00990 Diguanylate cyclase, GGDEF domain AA314_02558 PF04397 LytTr DNA-binding domain AA314_02558 PF00072 Response regulator receiver domain AA314_02559 PF05199 GMC oxidoreductase AA314_02566 PF00271 Helicase conserved C-terminal domain AA314_02566 PF08494 DEAD/H associated AA314_02566 PF00270 DEAD/DEAH box helicase AA314_02568 PF01068 ATP dependent DNA ligase domain AA314_02568 PF04679 ATP dependent DNA ligase C terminal region AA314_02568 PF04675 DNA ligase N terminus AA314_02572 PF00849 RNA pseudouridylate synthase AA314_02575 PF00480 ROK family AA314_02580 PF00482 Type II secretion system (T2SS), protein F AA314_02583 PF06580 Histidine kinase AA314_02583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02583 PF07694 5TMR of 5TMR-LYT AA314_02586 PF00106 short chain dehydrogenase AA314_02587 PF01243 Pyridoxamine 5'-phosphate oxidase AA314_02587 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AA314_02588 PF08323 Starch synthase catalytic domain AA314_02588 PF00534 Glycosyl transferases group 1 AA314_02589 PF00069 Protein kinase domain AA314_02589 PF03793 PASTA domain AA314_02591 PF00571 CBS domain AA314_02591 PF03471 Transporter associated domain AA314_02593 PF00069 Protein kinase domain AA314_02593 PF14032 PknH-like extracellular domain AA314_02594 PF07714 Protein tyrosine kinase AA314_02596 PF02254 TrkA-N domain AA314_02596 PF00999 Sodium/hydrogen exchanger family AA314_02600 PF00128 Alpha amylase, catalytic domain AA314_02600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA314_02602 PF00072 Response regulator receiver domain AA314_02602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02602 PF00512 His Kinase A (phospho-acceptor) domain AA314_02602 PF08448 PAS fold AA314_02602 PF13188 PAS domain AA314_02603 PF00512 His Kinase A (phospho-acceptor) domain AA314_02603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02604 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AA314_02608 PF00128 Alpha amylase, catalytic domain AA314_02608 PF00686 Starch binding domain AA314_02608 PF09081 Domain of unknown function (DUF1921) AA314_02614 PF00512 His Kinase A (phospho-acceptor) domain AA314_02614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02616 PF00067 Cytochrome P450 AA314_02617 PF00115 Cytochrome C and Quinol oxidase polypeptide I AA314_02621 PF04754 Putative transposase, YhgA-like AA314_02631 PF01048 Phosphorylase superfamily AA314_02632 PF01979 Amidohydrolase family AA314_02633 PF03793 PASTA domain AA314_02633 PF00069 Protein kinase domain AA314_02634 PF13367 PrsW family intramembrane metalloprotease AA314_02637 PF12146 Serine aminopeptidase, S33 AA314_02640 PF03641 Possible lysine decarboxylase AA314_02642 PF01979 Amidohydrolase family AA314_02650 PF00486 Transcriptional regulatory protein, C terminal AA314_02650 PF00072 Response regulator receiver domain AA314_02651 PF16736 Single Cache-like AA314_02651 PF00989 PAS fold AA314_02651 PF00512 His Kinase A (phospho-acceptor) domain AA314_02651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02653 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AA314_02653 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AA314_02655 PF16360 GTP-binding GTPase Middle Region AA314_02655 PF13167 GTP-binding GTPase N-terminal AA314_02655 PF01926 50S ribosome-binding GTPase AA314_02656 PF00696 Amino acid kinase family AA314_02656 PF01472 PUA domain AA314_02660 PF12773 Double zinc ribbon AA314_02660 PF00498 FHA domain AA314_02661 PF13396 Phospholipase_D-nuclease N-terminal AA314_02661 PF13091 PLD-like domain AA314_02662 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_02662 PF08447 PAS fold AA314_02662 PF13426 PAS domain AA314_02664 PF16177 Acetyl-coenzyme A synthetase N-terminus AA314_02664 PF13193 AMP-binding enzyme C-terminal domain AA314_02664 PF00501 AMP-binding enzyme AA314_02665 PF04679 ATP dependent DNA ligase C terminal region AA314_02665 PF01068 ATP dependent DNA ligase domain AA314_02665 PF13298 DNA polymerase Ligase (LigD) AA314_02667 PF00694 Aconitase C-terminal domain AA314_02667 PF00330 Aconitase family (aconitate hydratase) AA314_02669 PF13291 ACT domain AA314_02669 PF04607 Region found in RelA / SpoT proteins AA314_02669 PF02824 TGS domain AA314_02670 PF03462 PCRF domain AA314_02670 PF00472 RF-1 domain AA314_02673 PF04264 YceI-like domain AA314_02674 PF02678 Pirin AA314_02674 PF17954 Quercetinase C-terminal cupin domain AA314_02676 PF01625 Peptide methionine sulfoxide reductase AA314_02684 PF01434 Peptidase family M41 AA314_02684 PF17862 AAA+ lid domain AA314_02684 PF00004 ATPase family associated with various cellular activities (AAA) AA314_02688 PF03466 LysR substrate binding domain AA314_02688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_02689 PF01757 Acyltransferase family AA314_02691 PF00092 von Willebrand factor type A domain AA314_02694 PF00884 Sulfatase AA314_02696 PF00850 Histone deacetylase domain AA314_02700 PF00561 alpha/beta hydrolase fold AA314_02701 PF02463 RecF/RecN/SMC N terminal domain AA314_02704 PF00005 ABC transporter AA314_02705 PF02954 Bacterial regulatory protein, Fis family AA314_02705 PF00158 Sigma-54 interaction domain AA314_02705 PF00072 Response regulator receiver domain AA314_02713 PF00132 Bacterial transferase hexapeptide (six repeats) AA314_02713 PF12804 MobA-like NTP transferase domain AA314_02714 PF01380 SIS domain AA314_02715 PF00268 Ribonucleotide reductase, small chain AA314_02716 PF02867 Ribonucleotide reductase, barrel domain AA314_02716 PF03477 ATP cone domain AA314_02716 PF00317 Ribonucleotide reductase, all-alpha domain AA314_02717 PF00069 Protein kinase domain AA314_02723 PF00154 recA bacterial DNA recombination protein AA314_02730 PF00067 Cytochrome P450 AA314_02734 PF00232 Glycosyl hydrolase family 1 AA314_02735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AA314_02735 PF00005 ABC transporter AA314_02736 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AA314_02736 PF00005 ABC transporter AA314_02737 PF00528 Binding-protein-dependent transport system inner membrane component AA314_02738 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA314_02739 PF00722 Glycosyl hydrolases family 16 AA314_02740 PF01047 MarR family AA314_02740 PF00480 ROK family AA314_02743 PF00067 Cytochrome P450 AA314_02745 PF00108 Thiolase, N-terminal domain AA314_02745 PF02803 Thiolase, C-terminal domain AA314_02746 PF09339 IclR helix-turn-helix domain AA314_02750 PF07687 Peptidase dimerisation domain AA314_02750 PF01546 Peptidase family M20/M25/M40 AA314_02751 PF13378 Enolase C-terminal domain-like AA314_02751 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AA314_02756 PF13439 Glycosyltransferase Family 4 AA314_02758 PF01235 Sodium:alanine symporter family AA314_02760 PF00593 TonB dependent receptor AA314_02763 PF16921 Tex protein YqgF-like domain AA314_02763 PF09371 Tex-like protein N-terminal domain AA314_02763 PF17674 HHH domain AA314_02763 PF00575 S1 RNA binding domain AA314_02765 PF00072 Response regulator receiver domain AA314_02765 PF13426 PAS domain AA314_02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02766 PF13188 PAS domain AA314_02766 PF00072 Response regulator receiver domain AA314_02766 PF08448 PAS fold AA314_02766 PF00512 His Kinase A (phospho-acceptor) domain AA314_02766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02767 PF00248 Aldo/keto reductase family AA314_02777 PF00551 Formyl transferase AA314_02777 PF02911 Formyl transferase, C-terminal domain AA314_02778 PF01220 Dehydroquinase class II AA314_02779 PF01029 NusB family AA314_02779 PF01189 16S rRNA methyltransferase RsmB/F AA314_02780 PF08450 SMP-30/Gluconolactonase/LRE-like region AA314_02780 PF00069 Protein kinase domain AA314_02780 PF01436 NHL repeat AA314_02783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_02783 PF03466 LysR substrate binding domain AA314_02786 PF06745 KaiC AA314_02787 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02787 PF13426 PAS domain AA314_02787 PF00512 His Kinase A (phospho-acceptor) domain AA314_02787 PF00672 HAMP domain AA314_02788 PF00106 short chain dehydrogenase AA314_02794 PF00069 Protein kinase domain AA314_02796 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AA314_02796 PF00034 Cytochrome c AA314_02797 PF02541 Ppx/GppA phosphatase family AA314_02798 PF00135 Carboxylesterase family AA314_02808 PF02954 Bacterial regulatory protein, Fis family AA314_02808 PF00072 Response regulator receiver domain AA314_02808 PF00158 Sigma-54 interaction domain AA314_02809 PF00069 Protein kinase domain AA314_02811 PF01048 Phosphorylase superfamily AA314_02812 PF00698 Acyl transferase domain AA314_02812 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_02812 PF16197 Ketoacyl-synthetase C-terminal extension AA314_02812 PF00550 Phosphopantetheine attachment site AA314_02812 PF14765 Polyketide synthase dehydratase AA314_02812 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_02812 PF00107 Zinc-binding dehydrogenase AA314_02812 PF08659 KR domain AA314_02812 PF08240 Alcohol dehydrogenase GroES-like domain AA314_02817 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_02817 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_02817 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_02819 PF06745 KaiC AA314_02820 PF07689 KaiB domain AA314_02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02820 PF00512 His Kinase A (phospho-acceptor) domain AA314_02834 PF17203 Single cache domain 3 AA314_02834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02834 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AA314_02835 PF00270 DEAD/DEAH box helicase AA314_02835 PF00271 Helicase conserved C-terminal domain AA314_02838 PF01915 Glycosyl hydrolase family 3 C-terminal domain AA314_02838 PF14310 Fibronectin type III-like domain AA314_02838 PF07691 PA14 domain AA314_02838 PF00933 Glycosyl hydrolase family 3 N terminal domain AA314_02839 PF04101 Glycosyltransferase family 28 C-terminal domain AA314_02840 PF12849 PBP superfamily domain AA314_02841 PF02743 Cache domain AA314_02841 PF00672 HAMP domain AA314_02841 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_02845 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_02845 PF03413 Peptidase propeptide and YPEB domain AA314_02845 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_02845 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_02846 PF00072 Response regulator receiver domain AA314_02846 PF02954 Bacterial regulatory protein, Fis family AA314_02846 PF00158 Sigma-54 interaction domain AA314_02847 PF03793 PASTA domain AA314_02847 PF00069 Protein kinase domain AA314_02853 PF00849 RNA pseudouridylate synthase AA314_02855 PF05576 PS-10 peptidase S37 AA314_02864 PF00196 Bacterial regulatory proteins, luxR family AA314_02864 PF13426 PAS domain AA314_02865 PF08447 PAS fold AA314_02865 PF00512 His Kinase A (phospho-acceptor) domain AA314_02865 PF00989 PAS fold AA314_02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02865 PF13426 PAS domain AA314_02865 PF13493 Domain of unknown function (DUF4118) AA314_02868 PF00535 Glycosyl transferase family 2 AA314_02872 PF09334 tRNA synthetases class I (M) AA314_02872 PF08264 Anticodon-binding domain of tRNA AA314_02872 PF00133 tRNA synthetases class I (I, L, M and V) AA314_02872 PF13603 Leucyl-tRNA synthetase, Domain 2 AA314_02873 PF01029 NusB family AA314_02873 PF01189 16S rRNA methyltransferase RsmB/F AA314_02877 PF09335 SNARE associated Golgi protein AA314_02878 PF01479 S4 domain AA314_02878 PF00849 RNA pseudouridylate synthase AA314_02880 PF18074 Primosomal protein N C-terminal domain AA314_02880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AA314_02880 PF04851 Type III restriction enzyme, res subunit AA314_02880 PF17764 3′ DNA-binding domain (3′BD) AA314_02880 PF00271 Helicase conserved C-terminal domain AA314_02881 PF00684 DnaJ central domain AA314_02881 PF00226 DnaJ domain AA314_02881 PF01556 DnaJ C terminal domain AA314_02883 PF01327 Polypeptide deformylase AA314_02884 PF00730 HhH-GPD superfamily base excision DNA repair protein AA314_02884 PF00633 Helix-hairpin-helix motif AA314_02885 PF01476 LysM domain AA314_02885 PF08525 Opacity-associated protein A N-terminal motif AA314_02885 PF01551 Peptidase family M23 AA314_02886 PF00216 Bacterial DNA-binding protein AA314_02888 PF01066 CDP-alcohol phosphatidyltransferase AA314_02889 PF18146 Damage-inducible protein CinA KH domain AA314_02889 PF00994 Probable molybdopterin binding domain AA314_02889 PF02464 Competence-damaged protein AA314_02892 PF00154 recA bacterial DNA recombination protein AA314_02893 PF01553 Acyltransferase AA314_02894 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_02901 PF02472 Biopolymer transport protein ExbD/TolR AA314_02902 PF02472 Biopolymer transport protein ExbD/TolR AA314_02903 PF01618 MotA/TolQ/ExbB proton channel family AA314_02905 PF00593 TonB dependent receptor AA314_02912 PF10672 S-adenosylmethionine-dependent methyltransferase AA314_02912 PF02926 THUMP domain AA314_02912 PF01170 Putative RNA methylase family UPF0020 AA314_02915 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AA314_02915 PF17854 FtsK alpha domain AA314_02915 PF09397 Ftsk gamma domain AA314_02915 PF01580 FtsK/SpoIIIE family AA314_02917 PF02686 Glu-tRNAGln amidotransferase C subunit AA314_02918 PF01425 Amidase AA314_02919 PF02637 GatB domain AA314_02919 PF02934 GatB/GatE catalytic domain AA314_02920 PF12419 SNF2 Helicase protein AA314_02920 PF00271 Helicase conserved C-terminal domain AA314_02920 PF00176 SNF2 family N-terminal domain AA314_02928 PF00829 Ribosomal prokaryotic L21 protein AA314_02929 PF01016 Ribosomal L27 protein AA314_02930 PF01018 GTP1/OBG AA314_02930 PF01926 50S ribosome-binding GTPase AA314_02931 PF12105 SpoU, rRNA methylase, C-terminal AA314_02931 PF00588 SpoU rRNA Methylase family AA314_02934 PF00069 Protein kinase domain AA314_02936 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_02936 PF03466 LysR substrate binding domain AA314_02937 PF00106 short chain dehydrogenase AA314_02938 PF04055 Radical SAM superfamily AA314_02938 PF18693 TRAM domain AA314_02938 PF00919 Uncharacterized protein family UPF0004 AA314_02940 PF04461 Protein of unknown function (DUF520) AA314_02941 PF00753 Metallo-beta-lactamase superfamily AA314_02941 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AA314_02941 PF17770 Ribonuclease J C-terminal domain AA314_02952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02952 PF00512 His Kinase A (phospho-acceptor) domain AA314_02952 PF00672 HAMP domain AA314_02959 PF04072 Leucine carboxyl methyltransferase AA314_02965 PF00485 Phosphoribulokinase / Uridine kinase family AA314_02967 PF08338 Domain of unknown function (DUF1731) AA314_02967 PF01370 NAD dependent epimerase/dehydratase family AA314_02968 PF07969 Amidohydrolase family AA314_02970 PF18698 Histidine kinase sensor domain AA314_02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02970 PF00672 HAMP domain AA314_02970 PF00512 His Kinase A (phospho-acceptor) domain AA314_02971 PF00106 short chain dehydrogenase AA314_02972 PF00561 alpha/beta hydrolase fold AA314_02974 PF01960 ArgJ family AA314_02978 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_02978 PF00512 His Kinase A (phospho-acceptor) domain AA314_02979 PF01553 Acyltransferase AA314_02979 PF00501 AMP-binding enzyme AA314_02984 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_02984 PF00004 ATPase family associated with various cellular activities (AAA) AA314_02984 PF07724 AAA domain (Cdc48 subfamily) AA314_02984 PF17871 AAA lid domain AA314_02984 PF02861 Clp amino terminal domain, pathogenicity island component AA314_02989 PF03576 Peptidase family S58 AA314_03000 PF13802 Galactose mutarotase-like AA314_03000 PF17137 Domain of unknown function (DUF5110) AA314_03000 PF16338 Domain of unknown function (DUF4968) AA314_03000 PF01055 Glycosyl hydrolases family 31 AA314_03006 PF00512 His Kinase A (phospho-acceptor) domain AA314_03006 PF08448 PAS fold AA314_03006 PF13426 PAS domain AA314_03006 PF00072 Response regulator receiver domain AA314_03006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03007 PF00512 His Kinase A (phospho-acceptor) domain AA314_03007 PF08446 PAS fold AA314_03007 PF00360 Phytochrome region AA314_03007 PF01590 GAF domain AA314_03008 PF00072 Response regulator receiver domain AA314_03009 PF00512 His Kinase A (phospho-acceptor) domain AA314_03009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03014 PF02472 Biopolymer transport protein ExbD/TolR AA314_03015 PF02472 Biopolymer transport protein ExbD/TolR AA314_03019 PF00149 Calcineurin-like phosphoesterase AA314_03021 PF09456 RcsC Alpha-Beta-Loop (ABL) AA314_03021 PF00512 His Kinase A (phospho-acceptor) domain AA314_03021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03021 PF00072 Response regulator receiver domain AA314_03023 PF00512 His Kinase A (phospho-acceptor) domain AA314_03023 PF09456 RcsC Alpha-Beta-Loop (ABL) AA314_03023 PF00072 Response regulator receiver domain AA314_03023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03029 PF13460 NAD(P)H-binding AA314_03035 PF13361 UvrD-like helicase C-terminal domain AA314_03035 PF00580 UvrD/REP helicase N-terminal domain AA314_03037 PF02798 Glutathione S-transferase, N-terminal domain AA314_03040 PF00756 Putative esterase AA314_03045 PF00962 Adenosine/AMP deaminase AA314_03046 PF00106 short chain dehydrogenase AA314_03047 PF00512 His Kinase A (phospho-acceptor) domain AA314_03047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03047 PF00989 PAS fold AA314_03047 PF16736 Single Cache-like AA314_03048 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03048 PF00512 His Kinase A (phospho-acceptor) domain AA314_03048 PF07689 KaiB domain AA314_03049 PF01139 tRNA-splicing ligase RtcB AA314_03051 PF00483 Nucleotidyl transferase AA314_03052 PF00990 Diguanylate cyclase, GGDEF domain AA314_03052 PF00072 Response regulator receiver domain AA314_03053 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AA314_03054 PF13193 AMP-binding enzyme C-terminal domain AA314_03054 PF00501 AMP-binding enzyme AA314_03057 PF02585 GlcNAc-PI de-N-acetylase AA314_03058 PF01370 NAD dependent epimerase/dehydratase family AA314_03060 PF00128 Alpha amylase, catalytic domain AA314_03061 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA314_03061 PF00128 Alpha amylase, catalytic domain AA314_03062 PF03741 Integral membrane protein TerC family AA314_03063 PF04379 ApaG domain AA314_03064 PF00762 Ferrochelatase AA314_03068 PF03793 PASTA domain AA314_03068 PF00069 Protein kinase domain AA314_03069 PF01300 Telomere recombination AA314_03069 PF03481 Putative GTP-binding controlling metal-binding AA314_03070 PF01370 NAD dependent epimerase/dehydratase family AA314_03070 PF08338 Domain of unknown function (DUF1731) AA314_03071 PF00005 ABC transporter AA314_03073 PF13411 MerR HTH family regulatory protein AA314_03075 PF00072 Response regulator receiver domain AA314_03076 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03076 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_03076 PF00072 Response regulator receiver domain AA314_03076 PF01627 Hpt domain AA314_03076 PF00512 His Kinase A (phospho-acceptor) domain AA314_03076 PF00672 HAMP domain AA314_03077 PF01266 FAD dependent oxidoreductase AA314_03077 PF00355 Rieske [2Fe-2S] domain AA314_03080 PF00730 HhH-GPD superfamily base excision DNA repair protein AA314_03081 PF05139 Erythromycin esterase AA314_03081 PF00156 Phosphoribosyl transferase domain AA314_03082 PF09369 Domain of unknown function (DUF1998) AA314_03082 PF00271 Helicase conserved C-terminal domain AA314_03082 PF00270 DEAD/DEAH box helicase AA314_03083 PF13482 RNase_H superfamily AA314_03086 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AA314_03086 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AA314_03086 PF01488 Shikimate / quinate 5-dehydrogenase AA314_03088 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AA314_03088 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AA314_03091 PF00155 Aminotransferase class I and II AA314_03092 PF00561 alpha/beta hydrolase fold AA314_03093 PF00561 alpha/beta hydrolase fold AA314_03097 PF13419 Haloacid dehalogenase-like hydrolase AA314_03099 PF07690 Major Facilitator Superfamily AA314_03101 PF04072 Leucine carboxyl methyltransferase AA314_03104 PF02417 Chromate transporter AA314_03105 PF07681 DoxX AA314_03106 PF05649 Peptidase family M13 AA314_03106 PF01431 Peptidase family M13 AA314_03107 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AA314_03107 PF00326 Prolyl oligopeptidase family AA314_03109 PF00210 Ferritin-like domain AA314_03110 PF02627 Carboxymuconolactone decarboxylase family AA314_03111 PF00578 AhpC/TSA family AA314_03112 PF00158 Sigma-54 interaction domain AA314_03112 PF01590 GAF domain AA314_03115 PF01464 Transglycosylase SLT domain AA314_03115 PF01551 Peptidase family M23 AA314_03115 PF10145 Phage-related minor tail protein AA314_03120 PF06470 SMC proteins Flexible Hinge Domain AA314_03120 PF02463 RecF/RecN/SMC N terminal domain AA314_03121 PF00672 HAMP domain AA314_03121 PF00512 His Kinase A (phospho-acceptor) domain AA314_03121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03121 PF13426 PAS domain AA314_03128 PF00501 AMP-binding enzyme AA314_03128 PF13193 AMP-binding enzyme C-terminal domain AA314_03133 PF04185 Phosphoesterase family AA314_03140 PF01799 [2Fe-2S] binding domain AA314_03140 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_03141 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_03141 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AA314_03141 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AA314_03141 PF01799 [2Fe-2S] binding domain AA314_03150 PF13302 Acetyltransferase (GNAT) domain AA314_03154 PF01479 S4 domain AA314_03154 PF00849 RNA pseudouridylate synthase AA314_03156 PF14760 Rnk N-terminus AA314_03156 PF01272 Transcription elongation factor, GreA/GreB, C-term AA314_03157 PF06821 Serine hydrolase AA314_03161 PF00155 Aminotransferase class I and II AA314_03165 PF05175 Methyltransferase small domain AA314_03171 PF13193 AMP-binding enzyme C-terminal domain AA314_03171 PF00668 Condensation domain AA314_03171 PF00501 AMP-binding enzyme AA314_03171 PF00501 AMP-binding enzyme AA314_03171 PF13193 AMP-binding enzyme C-terminal domain AA314_03171 PF00668 Condensation domain AA314_03171 PF00550 Phosphopantetheine attachment site AA314_03171 PF00550 Phosphopantetheine attachment site AA314_03180 PF01554 MatE AA314_03182 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain AA314_03182 PF12706 Beta-lactamase superfamily domain AA314_03190 PF01189 16S rRNA methyltransferase RsmB/F AA314_03190 PF01029 NusB family AA314_03191 PF17676 LD-carboxypeptidase C-terminal domain AA314_03191 PF02016 LD-carboxypeptidase N-terminal domain AA314_03192 PF00144 Beta-lactamase AA314_03193 PF01225 Mur ligase family, catalytic domain AA314_03193 PF08245 Mur ligase middle domain AA314_03193 PF02875 Mur ligase family, glutamate ligase domain AA314_03194 PF00578 AhpC/TSA family AA314_03195 PF00459 Inositol monophosphatase family AA314_03199 PF00027 Cyclic nucleotide-binding domain AA314_03199 PF00520 Ion transport protein AA314_03208 PF00025 ADP-ribosylation factor family AA314_03212 PF00069 Protein kinase domain AA314_03213 PF13662 Toprim domain AA314_03213 PF02132 RecR protein AA314_03214 PF02575 YbaB/EbfC DNA-binding family AA314_03216 PF12169 DNA polymerase III subunits gamma and tau domain III AA314_03218 PF14437 MafB19-like deaminase AA314_03219 PF02403 Seryl-tRNA synthetase N-terminal domain AA314_03219 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AA314_03222 PF00535 Glycosyl transferase family 2 AA314_03224 PF03793 PASTA domain AA314_03224 PF00069 Protein kinase domain AA314_03226 PF01553 Acyltransferase AA314_03233 PF18698 Histidine kinase sensor domain AA314_03233 PF00989 PAS fold AA314_03233 PF00672 HAMP domain AA314_03233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03233 PF00512 His Kinase A (phospho-acceptor) domain AA314_03234 PF00155 Aminotransferase class I and II AA314_03239 PF16360 GTP-binding GTPase Middle Region AA314_03239 PF13167 GTP-binding GTPase N-terminal AA314_03239 PF01926 50S ribosome-binding GTPase AA314_03243 PF00271 Helicase conserved C-terminal domain AA314_03243 PF00570 HRDC domain AA314_03243 PF00270 DEAD/DEAH box helicase AA314_03243 PF09382 RQC domain AA314_03243 PF16124 RecQ zinc-binding AA314_03245 PF04002 RadC-like JAB domain AA314_03247 PF00072 Response regulator receiver domain AA314_03247 PF00990 Diguanylate cyclase, GGDEF domain AA314_03248 PF00672 HAMP domain AA314_03248 PF00512 His Kinase A (phospho-acceptor) domain AA314_03248 PF00072 Response regulator receiver domain AA314_03248 PF01627 Hpt domain AA314_03248 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_03248 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03249 PF00486 Transcriptional regulatory protein, C terminal AA314_03249 PF00072 Response regulator receiver domain AA314_03250 PF00672 HAMP domain AA314_03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03250 PF00512 His Kinase A (phospho-acceptor) domain AA314_03250 PF13426 PAS domain AA314_03253 PF01053 Cys/Met metabolism PLP-dependent enzyme AA314_03254 PF01967 MoaC family AA314_03255 PF00266 Aminotransferase class-V AA314_03256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03256 PF00512 His Kinase A (phospho-acceptor) domain AA314_03256 PF08448 PAS fold AA314_03256 PF13426 PAS domain AA314_03256 PF00072 Response regulator receiver domain AA314_03257 PF04101 Glycosyltransferase family 28 C-terminal domain AA314_03261 PF02630 SCO1/SenC AA314_03266 PF00440 Bacterial regulatory proteins, tetR family AA314_03269 PF08240 Alcohol dehydrogenase GroES-like domain AA314_03269 PF00107 Zinc-binding dehydrogenase AA314_03270 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AA314_03270 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AA314_03277 PF00741 Gas vesicle protein AA314_03280 PF00741 Gas vesicle protein AA314_03282 PF00741 Gas vesicle protein AA314_03283 PF02983 Alpha-lytic protease prodomain AA314_03291 PF00501 AMP-binding enzyme AA314_03291 PF01553 Acyltransferase AA314_03295 PF00293 NUDIX domain AA314_03296 PF13369 Transglutaminase-like superfamily AA314_03301 PF00069 Protein kinase domain AA314_03301 PF03793 PASTA domain AA314_03304 PF13380 CoA binding domain AA314_03306 PF01209 ubiE/COQ5 methyltransferase family AA314_03307 PF02310 B12 binding domain AA314_03307 PF02965 Vitamin B12 dependent methionine synthase, activation domain AA314_03307 PF00809 Pterin binding enzyme AA314_03307 PF02607 B12 binding domain AA314_03307 PF02574 Homocysteine S-methyltransferase AA314_03309 PF00432 Prenyltransferase and squalene oxidase repeat AA314_03309 PF13243 Squalene-hopene cyclase C-terminal domain AA314_03310 PF00067 Cytochrome P450 AA314_03315 PF00005 ABC transporter AA314_03315 PF00664 ABC transporter transmembrane region AA314_03315 PF03412 Peptidase C39 family AA314_03316 PF00529 HlyD membrane-fusion protein of T1SS AA314_03319 PF13575 Domain of unknown function (DUF4135) AA314_03319 PF05147 Lanthionine synthetase C-like protein AA314_03321 PF00534 Glycosyl transferases group 1 AA314_03321 PF13439 Glycosyltransferase Family 4 AA314_03322 PF13439 Glycosyltransferase Family 4 AA314_03322 PF00534 Glycosyl transferases group 1 AA314_03324 PF13439 Glycosyltransferase Family 4 AA314_03324 PF00534 Glycosyl transferases group 1 AA314_03326 PF00730 HhH-GPD superfamily base excision DNA repair protein AA314_03326 PF14815 NUDIX domain AA314_03326 PF00633 Helix-hairpin-helix motif AA314_03327 PF00106 short chain dehydrogenase AA314_03330 PF00899 ThiF family AA314_03331 PF01026 TatD related DNase AA314_03346 PF00580 UvrD/REP helicase N-terminal domain AA314_03346 PF13361 UvrD-like helicase C-terminal domain AA314_03347 PF00572 Ribosomal protein L13 AA314_03348 PF00380 Ribosomal protein S9/S16 AA314_03349 PF00437 Type II/IV secretion system protein AA314_03351 PF02631 RecX family AA314_03352 PF13525 Outer membrane lipoprotein AA314_03354 PF16697 Inner membrane component of T3SS, cytoplasmic domain AA314_03356 PF01520 N-acetylmuramoyl-L-alanine amidase AA314_03356 PF11741 AMIN domain AA314_03357 PF03725 3' exoribonuclease family, domain 2 AA314_03357 PF01138 3' exoribonuclease family, domain 1 AA314_03358 PF01725 Ham1 family AA314_03360 PF05698 Bacterial trigger factor protein (TF) C-terminus AA314_03360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_03360 PF05697 Bacterial trigger factor protein (TF) AA314_03361 PF00574 Clp protease AA314_03362 PF06689 ClpX C4-type zinc finger AA314_03362 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_03362 PF07724 AAA domain (Cdc48 subfamily) AA314_03363 PF00326 Prolyl oligopeptidase family AA314_03363 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AA314_03364 PF00004 ATPase family associated with various cellular activities (AAA) AA314_03364 PF05362 Lon protease (S16) C-terminal proteolytic domain AA314_03364 PF02190 ATP-dependent protease La (LON) substrate-binding domain AA314_03366 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA314_03369 PF00072 Response regulator receiver domain AA314_03370 PF02622 Uncharacterized ACR, COG1678 AA314_03371 PF01722 BolA-like protein AA314_03372 PF00462 Glutaredoxin AA314_03376 PF00557 Metallopeptidase family M24 AA314_03376 PF05195 Aminopeptidase P, N-terminal domain AA314_03377 PF07238 PilZ domain AA314_03377 PF00069 Protein kinase domain AA314_03381 PF05199 GMC oxidoreductase AA314_03381 PF00732 GMC oxidoreductase AA314_03388 PF03150 Di-haem cytochrome c peroxidase AA314_03388 PF00034 Cytochrome c AA314_03392 PF00034 Cytochrome c AA314_03392 PF03150 Di-haem cytochrome c peroxidase AA314_03398 PF13247 4Fe-4S dicluster domain AA314_03398 PF00037 4Fe-4S binding domain AA314_03403 PF04116 Fatty acid hydroxylase superfamily AA314_03406 PF00069 Protein kinase domain AA314_03408 PF00069 Protein kinase domain AA314_03408 PF03793 PASTA domain AA314_03413 PF00403 Heavy-metal-associated domain AA314_03415 PF00115 Cytochrome C and Quinol oxidase polypeptide I AA314_03418 PF13746 4Fe-4S dicluster domain AA314_03418 PF12801 4Fe-4S binding domain AA314_03418 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AA314_03424 PF00400 WD domain, G-beta repeat AA314_03424 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_03425 PF07470 Glycosyl Hydrolase Family 88 AA314_03427 PF07470 Glycosyl Hydrolase Family 88 AA314_03433 PF04055 Radical SAM superfamily AA314_03433 PF06969 HemN C-terminal domain AA314_03437 PF00176 SNF2 family N-terminal domain AA314_03437 PF12419 SNF2 Helicase protein AA314_03437 PF00271 Helicase conserved C-terminal domain AA314_03443 PF12034 Domain of unknown function (DUF3520) AA314_03443 PF12450 von Willebrand factor AA314_03443 PF00092 von Willebrand factor type A domain AA314_03445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03445 PF00512 His Kinase A (phospho-acceptor) domain AA314_03445 PF00989 PAS fold AA314_03445 PF11808 Phosphate regulon sensor protein PhoR AA314_03457 PF00069 Protein kinase domain AA314_03457 PF03793 PASTA domain AA314_03458 PF13520 Amino acid permease AA314_03465 PF00158 Sigma-54 interaction domain AA314_03465 PF02954 Bacterial regulatory protein, Fis family AA314_03465 PF00072 Response regulator receiver domain AA314_03466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03466 PF00512 His Kinase A (phospho-acceptor) domain AA314_03468 PF03781 Sulfatase-modifying factor enzyme 1 AA314_03470 PF18698 Histidine kinase sensor domain AA314_03470 PF00512 His Kinase A (phospho-acceptor) domain AA314_03470 PF00989 PAS fold AA314_03470 PF00672 HAMP domain AA314_03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03471 PF03793 PASTA domain AA314_03471 PF00069 Protein kinase domain AA314_03472 PF00069 Protein kinase domain AA314_03472 PF03793 PASTA domain AA314_03474 PF02805 Metal binding domain of Ada AA314_03474 PF06029 AlkA N-terminal domain AA314_03474 PF00730 HhH-GPD superfamily base excision DNA repair protein AA314_03474 PF12833 Helix-turn-helix domain AA314_03475 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AA314_03475 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AA314_03477 PF01915 Glycosyl hydrolase family 3 C-terminal domain AA314_03477 PF00933 Glycosyl hydrolase family 3 N terminal domain AA314_03477 PF14310 Fibronectin type III-like domain AA314_03484 PF02798 Glutathione S-transferase, N-terminal domain AA314_03485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_03485 PF03466 LysR substrate binding domain AA314_03496 PF01208 Uroporphyrinogen decarboxylase (URO-D) AA314_03499 PF02803 Thiolase, C-terminal domain AA314_03499 PF00108 Thiolase, N-terminal domain AA314_03500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AA314_03500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AA314_03500 PF00378 Enoyl-CoA hydratase/isomerase AA314_03501 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AA314_03501 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AA314_03501 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AA314_03503 PF04794 YdjC-like protein AA314_03504 PF00535 Glycosyl transferase family 2 AA314_03506 PF05230 MASE2 domain AA314_03506 PF00990 Diguanylate cyclase, GGDEF domain AA314_03507 PF13188 PAS domain AA314_03507 PF08448 PAS fold AA314_03507 PF00072 Response regulator receiver domain AA314_03507 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03507 PF00512 His Kinase A (phospho-acceptor) domain AA314_03508 PF00072 Response regulator receiver domain AA314_03508 PF02954 Bacterial regulatory protein, Fis family AA314_03508 PF00158 Sigma-54 interaction domain AA314_03509 PF16193 AAA C-terminal domain AA314_03509 PF00004 ATPase family associated with various cellular activities (AAA) AA314_03509 PF12002 MgsA AAA+ ATPase C terminal AA314_03510 PF01513 ATP-NAD kinase AA314_03512 PF02872 5'-nucleotidase, C-terminal domain AA314_03512 PF00149 Calcineurin-like phosphoesterase AA314_03514 PF01467 Cytidylyltransferase-like AA314_03515 PF07690 Major Facilitator Superfamily AA314_03516 PF00440 Bacterial regulatory proteins, tetR family AA314_03516 PF13977 BetI-type transcriptional repressor, C-terminal AA314_03517 PF00156 Phosphoribosyl transferase domain AA314_03518 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA314_03518 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA314_03519 PF00271 Helicase conserved C-terminal domain AA314_03519 PF00176 SNF2 family N-terminal domain AA314_03519 PF12419 SNF2 Helicase protein AA314_03520 PF02463 RecF/RecN/SMC N terminal domain AA314_03522 PF01476 LysM domain AA314_03522 PF08525 Opacity-associated protein A N-terminal motif AA314_03522 PF01551 Peptidase family M23 AA314_03524 PF01728 FtsJ-like methyltransferase AA314_03524 PF18125 RlmM ferredoxin-like domain AA314_03525 PF07517 SecA DEAD-like domain AA314_03525 PF01043 SecA preprotein cross-linking domain AA314_03525 PF07516 SecA Wing and Scaffold domain AA314_03525 PF02810 SEC-C motif AA314_03526 PF00318 Ribosomal protein S2 AA314_03527 PF00889 Elongation factor TS AA314_03528 PF00696 Amino acid kinase family AA314_03529 PF01765 Ribosome recycling factor AA314_03531 PF01491 Frataxin-like domain AA314_03534 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_03537 PF00535 Glycosyl transferase family 2 AA314_03540 PF00534 Glycosyl transferases group 1 AA314_03548 PF07690 Major Facilitator Superfamily AA314_03554 PF00012 Hsp70 protein AA314_03555 PF00012 Hsp70 protein AA314_03559 PF01040 UbiA prenyltransferase family AA314_03560 PF00005 ABC transporter AA314_03561 PF01061 ABC-2 type transporter AA314_03563 PF00672 HAMP domain AA314_03563 PF00512 His Kinase A (phospho-acceptor) domain AA314_03563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03564 PF00072 Response regulator receiver domain AA314_03564 PF00486 Transcriptional regulatory protein, C terminal AA314_03567 PF00313 'Cold-shock' DNA-binding domain AA314_03570 PF04539 Sigma-70 region 3 AA314_03570 PF04542 Sigma-70 region 2 AA314_03570 PF04545 Sigma-70, region 4 AA314_03570 PF03979 Sigma-70 factor, region 1.1 AA314_03570 PF04546 Sigma-70, non-essential region AA314_03570 PF00140 Sigma-70 factor, region 1.2 AA314_03572 PF10410 DnaB-helicase binding domain of primase AA314_03572 PF08275 DNA primase catalytic core, N-terminal domain AA314_03572 PF01807 CHC2 zinc finger AA314_03574 PF01165 Ribosomal protein S21 AA314_03577 PF00990 Diguanylate cyclase, GGDEF domain AA314_03577 PF17151 Periplasmic sensor domain AA314_03578 PF00710 Asparaginase, N-terminal AA314_03578 PF17763 Glutaminase/Asparaginase C-terminal domain AA314_03579 PF06965 Na+/H+ antiporter 1 AA314_03579 PF13462 Thioredoxin AA314_03581 PF01142 tRNA pseudouridine synthase D (TruD) AA314_03585 PF00691 OmpA family AA314_03585 PF05736 OprF membrane domain AA314_03593 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AA314_03593 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AA314_03595 PF03143 Elongation factor Tu C-terminal domain AA314_03595 PF00009 Elongation factor Tu GTP binding domain AA314_03595 PF03144 Elongation factor Tu domain 2 AA314_03600 PF00271 Helicase conserved C-terminal domain AA314_03600 PF00270 DEAD/DEAH box helicase AA314_03606 PF00672 HAMP domain AA314_03606 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03609 PF00905 Penicillin binding protein transpeptidase domain AA314_03609 PF17092 Penicillin-binding protein OB-like domain AA314_03609 PF00912 Transglycosylase AA314_03611 PF03372 Endonuclease/Exonuclease/phosphatase family AA314_03614 PF05199 GMC oxidoreductase AA314_03617 PF05922 Peptidase inhibitor I9 AA314_03617 PF00082 Subtilase family AA314_03622 PF00005 ABC transporter AA314_03624 PF00478 IMP dehydrogenase / GMP reductase domain AA314_03624 PF00571 CBS domain AA314_03625 PF04542 Sigma-70 region 2 AA314_03625 PF04545 Sigma-70, region 4 AA314_03625 PF00140 Sigma-70 factor, region 1.2 AA314_03626 PF02954 Bacterial regulatory protein, Fis family AA314_03626 PF00158 Sigma-54 interaction domain AA314_03626 PF00072 Response regulator receiver domain AA314_03630 PF00691 OmpA family AA314_03633 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_03634 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_03635 PF00072 Response regulator receiver domain AA314_03635 PF01627 Hpt domain AA314_03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03635 PF01584 CheW-like domain AA314_03636 PF01339 CheB methylesterase AA314_03636 PF00072 Response regulator receiver domain AA314_03637 PF01739 CheR methyltransferase, SAM binding domain AA314_03641 PF01197 Ribosomal protein L31 AA314_03642 PF01555 DNA methylase AA314_03645 PF01641 SelR domain AA314_03646 PF02033 Ribosome-binding factor A AA314_03647 PF01139 tRNA-splicing ligase RtcB AA314_03648 PF01476 LysM domain AA314_03648 PF01464 Transglycosylase SLT domain AA314_03649 PF00072 Response regulator receiver domain AA314_03649 PF13426 PAS domain AA314_03649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03652 PF02743 Cache domain AA314_03652 PF00672 HAMP domain AA314_03652 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_03653 PF00432 Prenyltransferase and squalene oxidase repeat AA314_03653 PF13243 Squalene-hopene cyclase C-terminal domain AA314_03658 PF00270 DEAD/DEAH box helicase AA314_03658 PF00271 Helicase conserved C-terminal domain AA314_03658 PF03880 DbpA RNA binding domain AA314_03664 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AA314_03664 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AA314_03665 PF00270 DEAD/DEAH box helicase AA314_03665 PF00271 Helicase conserved C-terminal domain AA314_03667 PF02979 Nitrile hydratase, alpha chain AA314_03673 PF01433 Peptidase family M1 domain AA314_03674 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AA314_03674 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AA314_03674 PF00378 Enoyl-CoA hydratase/isomerase AA314_03675 PF02803 Thiolase, C-terminal domain AA314_03675 PF00108 Thiolase, N-terminal domain AA314_03676 PF00873 AcrB/AcrD/AcrF family AA314_03681 PF05190 MutS family domain IV AA314_03681 PF01624 MutS domain I AA314_03681 PF05188 MutS domain II AA314_03681 PF05192 MutS domain III AA314_03681 PF00488 MutS domain V AA314_03682 PF00027 Cyclic nucleotide-binding domain AA314_03682 PF13545 Crp-like helix-turn-helix domain AA314_03683 PF02954 Bacterial regulatory protein, Fis family AA314_03683 PF00072 Response regulator receiver domain AA314_03683 PF00158 Sigma-54 interaction domain AA314_03684 PF13755 Sensor N-terminal transmembrane domain AA314_03684 PF00672 HAMP domain AA314_03684 PF13756 Stimulus-sensing domain AA314_03684 PF00512 His Kinase A (phospho-acceptor) domain AA314_03684 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03692 PF00512 His Kinase A (phospho-acceptor) domain AA314_03692 PF08448 PAS fold AA314_03692 PF13188 PAS domain AA314_03692 PF00072 Response regulator receiver domain AA314_03696 PF17284 Spermidine synthase tetramerisation domain AA314_03698 PF00106 short chain dehydrogenase AA314_03704 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA314_03706 PF01979 Amidohydrolase family AA314_03707 PF17785 PUA-like domain AA314_03707 PF10672 S-adenosylmethionine-dependent methyltransferase AA314_03708 PF13426 PAS domain AA314_03708 PF08448 PAS fold AA314_03708 PF00512 His Kinase A (phospho-acceptor) domain AA314_03708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03708 PF00072 Response regulator receiver domain AA314_03711 PF00106 short chain dehydrogenase AA314_03712 PF00069 Protein kinase domain AA314_03713 PF01416 tRNA pseudouridine synthase AA314_03715 PF03793 PASTA domain AA314_03715 PF00069 Protein kinase domain AA314_03721 PF03793 PASTA domain AA314_03721 PF00069 Protein kinase domain AA314_03724 PF00400 WD domain, G-beta repeat AA314_03724 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_03725 PF00571 CBS domain AA314_03725 PF02163 Peptidase family M50 AA314_03726 PF00571 CBS domain AA314_03726 PF02163 Peptidase family M50 AA314_03727 PF03793 PASTA domain AA314_03727 PF00069 Protein kinase domain AA314_03728 PF01381 Helix-turn-helix AA314_03728 PF07883 Cupin domain AA314_03729 PF00722 Glycosyl hydrolases family 16 AA314_03730 PF04616 Glycosyl hydrolases family 43 AA314_03730 PF03422 Carbohydrate binding module (family 6) AA314_03731 PF00072 Response regulator receiver domain AA314_03731 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_03735 PF00069 Protein kinase domain AA314_03741 PF13478 XdhC Rossmann domain AA314_03741 PF02625 XdhC and CoxI family AA314_03749 PF13302 Acetyltransferase (GNAT) domain AA314_03749 PF00027 Cyclic nucleotide-binding domain AA314_03750 PF01048 Phosphorylase superfamily AA314_03753 PF00069 Protein kinase domain AA314_03753 PF03793 PASTA domain AA314_03756 PF00593 TonB dependent receptor AA314_03756 PF07715 TonB-dependent Receptor Plug Domain AA314_03757 PF17871 AAA lid domain AA314_03757 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_03757 PF00004 ATPase family associated with various cellular activities (AAA) AA314_03757 PF02861 Clp amino terminal domain, pathogenicity island component AA314_03757 PF07724 AAA domain (Cdc48 subfamily) AA314_03763 PF02581 Thiamine monophosphate synthase AA314_03764 PF07722 Peptidase C26 AA314_03765 PF08543 Phosphomethylpyrimidine kinase AA314_03767 PF00772 DnaB-like helicase N terminal domain AA314_03767 PF03796 DnaB-like helicase C terminal domain AA314_03768 PF01281 Ribosomal protein L9, N-terminal domain AA314_03768 PF03948 Ribosomal protein L9, C-terminal domain AA314_03769 PF01084 Ribosomal protein S18 AA314_03770 PF01250 Ribosomal protein S6 AA314_03771 PF01195 Peptidyl-tRNA hydrolase AA314_03772 PF01386 Ribosomal L25p family AA314_03772 PF14693 Ribosomal protein TL5, C-terminal domain AA314_03773 PF14572 Phosphoribosyl synthetase-associated domain AA314_03773 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AA314_03774 PF04026 SpoVG AA314_03776 PF00265 Thymidine kinase AA314_03778 PF01171 PP-loop family AA314_03778 PF00156 Phosphoribosyl transferase domain AA314_03778 PF11734 TilS substrate C-terminal domain AA314_03779 PF03412 Peptidase C39 family AA314_03779 PF00005 ABC transporter AA314_03779 PF00664 ABC transporter transmembrane region AA314_03782 PF08443 RimK-like ATP-grasp domain AA314_03782 PF18030 RimK PreATP-grasp domain AA314_03788 PF01678 Diaminopimelate epimerase AA314_03789 PF00072 Response regulator receiver domain AA314_03790 PF00072 Response regulator receiver domain AA314_03790 PF00486 Transcriptional regulatory protein, C terminal AA314_03791 PF08448 PAS fold AA314_03791 PF00512 His Kinase A (phospho-acceptor) domain AA314_03791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03791 PF13188 PAS domain AA314_03791 PF00072 Response regulator receiver domain AA314_03792 PF00072 Response regulator receiver domain AA314_03793 PF00512 His Kinase A (phospho-acceptor) domain AA314_03793 PF00360 Phytochrome region AA314_03793 PF08446 PAS fold AA314_03793 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03793 PF01590 GAF domain AA314_03797 PF13649 Methyltransferase domain AA314_03798 PF00106 short chain dehydrogenase AA314_03800 PF00301 Rubredoxin AA314_03803 PF00675 Insulinase (Peptidase family M16) AA314_03803 PF05193 Peptidase M16 inactive domain AA314_03804 PF00512 His Kinase A (phospho-acceptor) domain AA314_03804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03808 PF01435 Peptidase family M48 AA314_03810 PF01070 FMN-dependent dehydrogenase AA314_03811 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AA314_03817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03817 PF00512 His Kinase A (phospho-acceptor) domain AA314_03817 PF00989 PAS fold AA314_03817 PF16736 Single Cache-like AA314_03821 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_03822 PF00012 Hsp70 protein AA314_03823 PF07743 HSCB C-terminal oligomerisation domain AA314_03823 PF00226 DnaJ domain AA314_03824 PF01521 Iron-sulphur cluster biosynthesis AA314_03825 PF01592 NifU-like N terminal domain AA314_03826 PF00266 Aminotransferase class-V AA314_03828 PF00557 Metallopeptidase family M24 AA314_03834 PF01575 MaoC like domain AA314_03836 PF07690 Major Facilitator Superfamily AA314_03837 PF02683 Cytochrome C biogenesis protein transmembrane region AA314_03837 PF11412 Disulphide bond corrector protein DsbC AA314_03841 PF00069 Protein kinase domain AA314_03843 PF00128 Alpha amylase, catalytic domain AA314_03843 PF00686 Starch binding domain AA314_03843 PF09081 Domain of unknown function (DUF1921) AA314_03850 PF01554 MatE AA314_03852 PF05114 Protein of unknown function (DUF692) AA314_03858 PF04717 Type VI secretion system, phage-baseplate injector AA314_03870 PF00158 Sigma-54 interaction domain AA314_03870 PF06956 Regulator of RNA terminal phosphate cyclase AA314_03871 PF01139 tRNA-splicing ligase RtcB AA314_03872 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AA314_03872 PF01137 RNA 3'-terminal phosphate cyclase AA314_03874 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AA314_03874 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AA314_03880 PF01709 Transcriptional regulator AA314_03881 PF02075 Crossover junction endodeoxyribonuclease RuvC AA314_03882 PF01330 RuvA N terminal domain AA314_03882 PF07499 RuvA, C-terminal domain AA314_03895 PF08000 Bacterial PH domain AA314_03895 PF11724 YvbH-like oligomerisation region AA314_03900 PF00107 Zinc-binding dehydrogenase AA314_03900 PF08240 Alcohol dehydrogenase GroES-like domain AA314_03901 PF17864 RuvB AAA lid domain AA314_03901 PF05491 RuvB C-terminal winged helix domain AA314_03901 PF05496 Holliday junction DNA helicase RuvB P-loop domain AA314_03903 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AA314_03904 PF13462 Thioredoxin AA314_03904 PF06965 Na+/H+ antiporter 1 AA314_03907 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AA314_03909 PF02789 Cytosol aminopeptidase family, N-terminal domain AA314_03909 PF00883 Cytosol aminopeptidase family, catalytic domain AA314_03911 PF01925 Sulfite exporter TauE/SafE AA314_03914 PF01381 Helix-turn-helix AA314_03914 PF06114 IrrE N-terminal-like domain AA314_03914 PF09856 Predicted transcriptional regulator (DUF2083) AA314_03917 PF05114 Protein of unknown function (DUF692) AA314_03923 PF08281 Sigma-70, region 4 AA314_03923 PF04542 Sigma-70 region 2 AA314_03924 PF00266 Aminotransferase class-V AA314_03926 PF01431 Peptidase family M13 AA314_03926 PF05649 Peptidase family M13 AA314_03927 PF04055 Radical SAM superfamily AA314_03928 PF03734 L,D-transpeptidase catalytic domain AA314_03928 PF01471 Putative peptidoglycan binding domain AA314_03933 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AA314_03934 PF05175 Methyltransferase small domain AA314_03934 PF17827 PrmC N-terminal domain AA314_03935 PF00472 RF-1 domain AA314_03935 PF03462 PCRF domain AA314_03938 PF01595 Cyclin M transmembrane N-terminal domain AA314_03938 PF03471 Transporter associated domain AA314_03938 PF00571 CBS domain AA314_03940 PF02463 RecF/RecN/SMC N terminal domain AA314_03940 PF06470 SMC proteins Flexible Hinge Domain AA314_03945 PF00158 Sigma-54 interaction domain AA314_03945 PF06506 Propionate catabolism activator AA314_03945 PF02954 Bacterial regulatory protein, Fis family AA314_03947 PF00462 Glutaredoxin AA314_03948 PF00118 TCP-1/cpn60 chaperonin family AA314_03949 PF00166 Chaperonin 10 Kd subunit AA314_03952 PF00293 NUDIX domain AA314_03953 PF01192 RNA polymerase Rpb6 AA314_03954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03954 PF00512 His Kinase A (phospho-acceptor) domain AA314_03955 PF13458 Periplasmic binding protein AA314_03956 PF00083 Sugar (and other) transporter AA314_03961 PF08281 Sigma-70, region 4 AA314_03961 PF04542 Sigma-70 region 2 AA314_03966 PF00067 Cytochrome P450 AA314_03967 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03967 PF07730 Histidine kinase AA314_03968 PF00196 Bacterial regulatory proteins, luxR family AA314_03968 PF00072 Response regulator receiver domain AA314_03970 PF00857 Isochorismatase family AA314_03973 PF05977 Transmembrane secretion effector AA314_03979 PF02632 BioY family AA314_03980 PF00501 AMP-binding enzyme AA314_03980 PF13193 AMP-binding enzyme C-terminal domain AA314_03981 PF00072 Response regulator receiver domain AA314_03981 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_03981 PF00512 His Kinase A (phospho-acceptor) domain AA314_03981 PF09456 RcsC Alpha-Beta-Loop (ABL) AA314_03982 PF01494 FAD binding domain AA314_03990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_03990 PF03466 LysR substrate binding domain AA314_03992 PF01965 DJ-1/PfpI family AA314_03993 PF01965 DJ-1/PfpI family AA314_03994 PF01738 Dienelactone hydrolase family AA314_03998 PF00158 Sigma-54 interaction domain AA314_03998 PF00072 Response regulator receiver domain AA314_03998 PF02954 Bacterial regulatory protein, Fis family AA314_04003 PF00069 Protein kinase domain AA314_04003 PF03793 PASTA domain AA314_04023 PF00005 ABC transporter AA314_04024 PF00696 Amino acid kinase family AA314_04024 PF01842 ACT domain AA314_04024 PF13840 ACT domain AA314_04025 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_04033 PF00498 FHA domain AA314_04043 PF02978 Signal peptide binding domain AA314_04043 PF00448 SRP54-type protein, GTPase domain AA314_04043 PF02881 SRP54-type protein, helical bundle domain AA314_04044 PF03621 MbtH-like protein AA314_04045 PF12706 Beta-lactamase superfamily domain AA314_04045 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain AA314_04046 PF02872 5'-nucleotidase, C-terminal domain AA314_04046 PF00149 Calcineurin-like phosphoesterase AA314_04048 PF12706 Beta-lactamase superfamily domain AA314_04048 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain AA314_04049 PF00005 ABC transporter AA314_04049 PF00664 ABC transporter transmembrane region AA314_04050 PF00501 AMP-binding enzyme AA314_04050 PF00550 Phosphopantetheine attachment site AA314_04050 PF00668 Condensation domain AA314_04050 PF13193 AMP-binding enzyme C-terminal domain AA314_04052 PF01048 Phosphorylase superfamily AA314_04061 PF00004 ATPase family associated with various cellular activities (AAA) AA314_04061 PF17862 AAA+ lid domain AA314_04061 PF01434 Peptidase family M41 AA314_04065 PF07238 PilZ domain AA314_04065 PF00069 Protein kinase domain AA314_04067 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_04067 PF00069 Protein kinase domain AA314_04068 PF02913 FAD linked oxidases, C-terminal domain AA314_04068 PF01565 FAD binding domain AA314_04069 PF00668 Condensation domain AA314_04069 PF00550 Phosphopantetheine attachment site AA314_04069 PF00975 Thioesterase domain AA314_04069 PF13193 AMP-binding enzyme C-terminal domain AA314_04069 PF00501 AMP-binding enzyme AA314_04071 PF00501 AMP-binding enzyme AA314_04071 PF00668 Condensation domain AA314_04071 PF13193 AMP-binding enzyme C-terminal domain AA314_04071 PF00550 Phosphopantetheine attachment site AA314_04073 PF00005 ABC transporter AA314_04074 PF02687 FtsX-like permease family AA314_04074 PF12704 MacB-like periplasmic core domain AA314_04074 PF00005 ABC transporter AA314_04076 PF04389 Peptidase family M28 AA314_04078 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA314_04079 PF00155 Aminotransferase class I and II AA314_04080 PF00571 CBS domain AA314_04080 PF03471 Transporter associated domain AA314_04080 PF01595 Cyclin M transmembrane N-terminal domain AA314_04081 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_04081 PF01627 Hpt domain AA314_04081 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04081 PF00072 Response regulator receiver domain AA314_04081 PF00512 His Kinase A (phospho-acceptor) domain AA314_04081 PF00672 HAMP domain AA314_04082 PF00149 Calcineurin-like phosphoesterase AA314_04085 PF01895 PhoU domain AA314_04086 PF00005 ABC transporter AA314_04087 PF00528 Binding-protein-dependent transport system inner membrane component AA314_04088 PF00528 Binding-protein-dependent transport system inner membrane component AA314_04089 PF12849 PBP superfamily domain AA314_04090 PF00486 Transcriptional regulatory protein, C terminal AA314_04090 PF00072 Response regulator receiver domain AA314_04091 PF00300 Histidine phosphatase superfamily (branch 1) AA314_04093 PF00512 His Kinase A (phospho-acceptor) domain AA314_04093 PF00989 PAS fold AA314_04093 PF16736 Single Cache-like AA314_04093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04094 PF00072 Response regulator receiver domain AA314_04094 PF00486 Transcriptional regulatory protein, C terminal AA314_04097 PF02620 Large ribosomal RNA subunit accumulation protein YceD AA314_04100 PF00672 HAMP domain AA314_04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04100 PF00512 His Kinase A (phospho-acceptor) domain AA314_04103 PF05736 OprF membrane domain AA314_04103 PF00691 OmpA family AA314_04107 PF13282 Domain of unknown function (DUF4070) AA314_04107 PF04055 Radical SAM superfamily AA314_04107 PF02310 B12 binding domain AA314_04108 PF02705 K+ potassium transporter AA314_04109 PF04960 Glutaminase AA314_04110 PF01047 MarR family AA314_04111 PF00248 Aldo/keto reductase family AA314_04112 PF12680 SnoaL-like domain AA314_04112 PF08281 Sigma-70, region 4 AA314_04112 PF04542 Sigma-70 region 2 AA314_04113 PF02627 Carboxymuconolactone decarboxylase family AA314_04115 PF00005 ABC transporter AA314_04116 PF13188 PAS domain AA314_04116 PF08448 PAS fold AA314_04116 PF00512 His Kinase A (phospho-acceptor) domain AA314_04116 PF00072 Response regulator receiver domain AA314_04116 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04118 PF01494 FAD binding domain AA314_04121 PF10145 Phage-related minor tail protein AA314_04121 PF01551 Peptidase family M23 AA314_04121 PF01464 Transglycosylase SLT domain AA314_04126 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AA314_04126 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AA314_04127 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AA314_04128 PF07690 Major Facilitator Superfamily AA314_04129 PF03466 LysR substrate binding domain AA314_04129 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_04130 PF14659 Phage integrase, N-terminal SAM-like domain AA314_04130 PF00589 Phage integrase family AA314_04135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AA314_04135 PF00205 Thiamine pyrophosphate enzyme, central domain AA314_04135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA314_04137 PF05552 Conserved TM helix AA314_04137 PF00924 Mechanosensitive ion channel AA314_04138 PF00723 Glycosyl hydrolases family 15 AA314_04140 PF01783 Ribosomal L32p protein family AA314_04141 PF02504 Fatty acid synthesis protein AA314_04142 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA314_04142 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA314_04143 PF00698 Acyl transferase domain AA314_04145 PF00550 Phosphopantetheine attachment site AA314_04146 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_04146 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_04147 PF02502 Ribose/Galactose Isomerase AA314_04148 PF00464 Serine hydroxymethyltransferase AA314_04149 PF03477 ATP cone domain AA314_04150 PF01872 RibD C-terminal domain AA314_04150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AA314_04151 PF13243 Squalene-hopene cyclase C-terminal domain AA314_04151 PF00432 Prenyltransferase and squalene oxidase repeat AA314_04153 PF00067 Cytochrome P450 AA314_04154 PF00069 Protein kinase domain AA314_04158 PF01494 FAD binding domain AA314_04159 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_04159 PF00672 HAMP domain AA314_04159 PF02743 Cache domain AA314_04160 PF00067 Cytochrome P450 AA314_04162 PF00067 Cytochrome P450 AA314_04163 PF00677 Lumazine binding domain AA314_04164 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AA314_04164 PF00925 GTP cyclohydrolase II AA314_04165 PF00885 6,7-dimethyl-8-ribityllumazine synthase AA314_04166 PF01029 NusB family AA314_04168 PF00072 Response regulator receiver domain AA314_04169 PF01627 Hpt domain AA314_04169 PF07194 P2 response regulator binding domain AA314_04169 PF02895 Signal transducing histidine kinase, homodimeric domain AA314_04169 PF01584 CheW-like domain AA314_04169 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04170 PF01584 CheW-like domain AA314_04171 PF01584 CheW-like domain AA314_04173 PF03705 CheR methyltransferase, all-alpha domain AA314_04173 PF01739 CheR methyltransferase, SAM binding domain AA314_04174 PF00072 Response regulator receiver domain AA314_04174 PF01339 CheB methylesterase AA314_04176 PF01464 Transglycosylase SLT domain AA314_04179 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AA314_04179 PF02142 MGS-like domain AA314_04179 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA314_04187 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AA314_04187 PF06827 Zinc finger found in FPG and IleRS AA314_04187 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AA314_04188 PF00072 Response regulator receiver domain AA314_04189 PF13603 Leucyl-tRNA synthetase, Domain 2 AA314_04189 PF09334 tRNA synthetases class I (M) AA314_04189 PF00133 tRNA synthetases class I (I, L, M and V) AA314_04189 PF08264 Anticodon-binding domain of tRNA AA314_04192 PF01649 Ribosomal protein S20 AA314_04193 PF03819 MazG nucleotide pyrophosphohydrolase domain AA314_04195 PF01978 Sugar-specific transcriptional regulator TrmB AA314_04195 PF14332 Domain of unknown function (DUF4388) AA314_04196 PF02562 PhoH-like protein AA314_04197 PF07698 7TM receptor with intracellular HD hydrolase AA314_04197 PF01966 HD domain AA314_04197 PF07697 7TM-HD extracellular AA314_04198 PF07883 Cupin domain AA314_04198 PF02130 Uncharacterized protein family UPF0054 AA314_04202 PF03462 PCRF domain AA314_04202 PF00472 RF-1 domain AA314_04203 PF08281 Sigma-70, region 4 AA314_04203 PF04542 Sigma-70 region 2 AA314_04205 PF00152 tRNA synthetases class II (D, K and N) AA314_04205 PF01336 OB-fold nucleic acid binding domain AA314_04206 PF12704 MacB-like periplasmic core domain AA314_04206 PF02687 FtsX-like permease family AA314_04207 PF00005 ABC transporter AA314_04208 PF07244 Surface antigen variable number repeat AA314_04208 PF01103 Surface antigen AA314_04210 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AA314_04210 PF00132 Bacterial transferase hexapeptide (six repeats) AA314_04211 PF07977 FabA-like domain AA314_04212 PF00132 Bacterial transferase hexapeptide (six repeats) AA314_04212 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AA314_04216 PF01914 MarC family integral membrane protein AA314_04217 PF00535 Glycosyl transferase family 2 AA314_04217 PF00795 Carbon-nitrogen hydrolase AA314_04218 PF02684 Lipid-A-disaccharide synthetase AA314_04222 PF00583 Acetyltransferase (GNAT) family AA314_04224 PF02080 TrkA-C domain AA314_04224 PF06826 Predicted Permease Membrane Region AA314_04225 PF00583 Acetyltransferase (GNAT) family AA314_04227 PF00664 ABC transporter transmembrane region AA314_04227 PF00005 ABC transporter AA314_04229 PF04151 Bacterial pre-peptidase C-terminal domain AA314_04229 PF03413 Peptidase propeptide and YPEB domain AA314_04229 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_04229 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_04229 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_04230 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AA314_04232 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AA314_04233 PF00294 pfkB family carbohydrate kinase AA314_04233 PF01467 Cytidylyltransferase-like AA314_04234 PF00294 pfkB family carbohydrate kinase AA314_04234 PF01467 Cytidylyltransferase-like AA314_04236 PF03755 YicC-like family, N-terminal region AA314_04236 PF08340 Domain of unknown function (DUF1732) AA314_04237 PF00625 Guanylate kinase AA314_04238 PF00069 Protein kinase domain AA314_04239 PF04055 Radical SAM superfamily AA314_04239 PF12544 Lysine-2,3-aminomutase AA314_04240 PF12544 Lysine-2,3-aminomutase AA314_04240 PF04055 Radical SAM superfamily AA314_04243 PF08486 Stage II sporulation protein AA314_04243 PF04122 Putative cell wall binding repeat 2 AA314_04244 PF02547 Queuosine biosynthesis protein AA314_04247 PF02699 Preprotein translocase subunit AA314_04248 PF02355 Protein export membrane protein AA314_04248 PF07549 SecD/SecF GG Motif AA314_04249 PF07549 SecD/SecF GG Motif AA314_04249 PF02355 Protein export membrane protein AA314_04251 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AA314_04251 PF17768 RecJ OB domain AA314_04251 PF02272 DHHA1 domain AA314_04251 PF01368 DHH family AA314_04258 PF01336 OB-fold nucleic acid binding domain AA314_04258 PF02938 GAD domain AA314_04258 PF00152 tRNA synthetases class II (D, K and N) AA314_04259 PF00781 Diacylglycerol kinase catalytic domain AA314_04261 PF00072 Response regulator receiver domain AA314_04261 PF00158 Sigma-54 interaction domain AA314_04262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04262 PF00672 HAMP domain AA314_04262 PF00512 His Kinase A (phospho-acceptor) domain AA314_04262 PF16527 Two-component sensor protein CpxA, periplasmic domain AA314_04263 PF00916 Sulfate permease family AA314_04263 PF01740 STAS domain AA314_04265 PF01979 Amidohydrolase family AA314_04266 PF00069 Protein kinase domain AA314_04275 PF00488 MutS domain V AA314_04275 PF01713 Smr domain AA314_04277 PF00271 Helicase conserved C-terminal domain AA314_04277 PF00176 SNF2 family N-terminal domain AA314_04279 PF17863 AAA lid domain AA314_04279 PF07726 ATPase family associated with various cellular activities (AAA) AA314_04281 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AA314_04282 PF00072 Response regulator receiver domain AA314_04282 PF01966 HD domain AA314_04283 PF01113 Dihydrodipicolinate reductase, N-terminus AA314_04284 PF13452 N-terminal half of MaoC dehydratase AA314_04286 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_04286 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_04286 PF12806 Acetyl-CoA dehydrogenase C-terminal like AA314_04286 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_04287 PF00800 Prephenate dehydratase AA314_04287 PF01817 Chorismate mutase type II AA314_04287 PF01842 ACT domain AA314_04291 PF02472 Biopolymer transport protein ExbD/TolR AA314_04292 PF01618 MotA/TolQ/ExbB proton channel family AA314_04296 PF00005 ABC transporter AA314_04296 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AA314_04297 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AA314_04297 PF00005 ABC transporter AA314_04301 PF04542 Sigma-70 region 2 AA314_04301 PF08281 Sigma-70, region 4 AA314_04313 PF16697 Inner membrane component of T3SS, cytoplasmic domain AA314_04315 PF02601 Exonuclease VII, large subunit AA314_04315 PF13742 OB-fold nucleic acid binding domain AA314_04317 PF00072 Response regulator receiver domain AA314_04317 PF00486 Transcriptional regulatory protein, C terminal AA314_04318 PF00348 Polyprenyl synthetase AA314_04319 PF02780 Transketolase, C-terminal domain AA314_04319 PF02779 Transketolase, pyrimidine binding domain AA314_04319 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AA314_04320 PF01728 FtsJ-like methyltransferase AA314_04320 PF01479 S4 domain AA314_04323 PF00106 short chain dehydrogenase AA314_04327 PF03797 Autotransporter beta-domain AA314_04328 PF05736 OprF membrane domain AA314_04328 PF00691 OmpA family AA314_04329 PF00512 His Kinase A (phospho-acceptor) domain AA314_04329 PF00072 Response regulator receiver domain AA314_04329 PF13426 PAS domain AA314_04329 PF08448 PAS fold AA314_04329 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04336 PF00156 Phosphoribosyl transferase domain AA314_04338 PF03641 Possible lysine decarboxylase AA314_04339 PF02910 Fumarate reductase flavoprotein C-term AA314_04339 PF00890 FAD binding domain AA314_04340 PF01464 Transglycosylase SLT domain AA314_04342 PF01066 CDP-alcohol phosphatidyltransferase AA314_04343 PF01061 ABC-2 type transporter AA314_04344 PF14524 Wzt C-terminal domain AA314_04344 PF00005 ABC transporter AA314_04347 PF00535 Glycosyl transferase family 2 AA314_04347 PF00534 Glycosyl transferases group 1 AA314_04350 PF16363 GDP-mannose 4,6 dehydratase AA314_04351 PF04321 RmlD substrate binding domain AA314_04352 PF00483 Nucleotidyl transferase AA314_04353 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AA314_04354 PF00535 Glycosyl transferase family 2 AA314_04355 PF00535 Glycosyl transferase family 2 AA314_04355 PF00534 Glycosyl transferases group 1 AA314_04356 PF03631 Virulence factor BrkB AA314_04357 PF00005 ABC transporter AA314_04357 PF12848 ABC transporter AA314_04363 PF00520 Ion transport protein AA314_04363 PF00027 Cyclic nucleotide-binding domain AA314_04365 PF00296 Luciferase-like monooxygenase AA314_04366 PF01702 Queuine tRNA-ribosyltransferase AA314_04373 PF00311 Phosphoenolpyruvate carboxylase AA314_04374 PF07690 Major Facilitator Superfamily AA314_04378 PF02780 Transketolase, C-terminal domain AA314_04378 PF02779 Transketolase, pyrimidine binding domain AA314_04379 PF00676 Dehydrogenase E1 component AA314_04380 PF00654 Voltage gated chloride channel AA314_04381 PF00672 HAMP domain AA314_04381 PF00512 His Kinase A (phospho-acceptor) domain AA314_04381 PF00989 PAS fold AA314_04381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04381 PF18698 Histidine kinase sensor domain AA314_04382 PF07228 Stage II sporulation protein E (SpoIIE) AA314_04382 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain AA314_04385 PF00593 TonB dependent receptor AA314_04385 PF07715 TonB-dependent Receptor Plug Domain AA314_04387 PF00069 Protein kinase domain AA314_04391 PF01266 FAD dependent oxidoreductase AA314_04391 PF05690 Thiazole biosynthesis protein ThiG AA314_04394 PF07714 Protein tyrosine kinase AA314_04396 PF00067 Cytochrome P450 AA314_04398 PF00092 von Willebrand factor type A domain AA314_04403 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA314_04404 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA314_04409 PF00106 short chain dehydrogenase AA314_04410 PF00425 chorismate binding enzyme AA314_04411 PF13193 AMP-binding enzyme C-terminal domain AA314_04411 PF00501 AMP-binding enzyme AA314_04412 PF00857 Isochorismatase family AA314_04412 PF00550 Phosphopantetheine attachment site AA314_04413 PF13193 AMP-binding enzyme C-terminal domain AA314_04413 PF00550 Phosphopantetheine attachment site AA314_04413 PF00668 Condensation domain AA314_04413 PF00975 Thioesterase domain AA314_04413 PF00501 AMP-binding enzyme AA314_04414 PF13193 AMP-binding enzyme C-terminal domain AA314_04414 PF00668 Condensation domain AA314_04414 PF07993 Male sterility protein AA314_04414 PF00550 Phosphopantetheine attachment site AA314_04414 PF00501 AMP-binding enzyme AA314_04415 PF01474 Class-II DAHP synthetase family AA314_04416 PF00593 TonB dependent receptor AA314_04416 PF07715 TonB-dependent Receptor Plug Domain AA314_04423 PF00440 Bacterial regulatory proteins, tetR family AA314_04424 PF01926 50S ribosome-binding GTPase AA314_04430 PF05593 RHS Repeat AA314_04430 PF05593 RHS Repeat AA314_04430 PF05488 PAAR motif AA314_04430 PF05488 PAAR motif AA314_04432 PF13193 AMP-binding enzyme C-terminal domain AA314_04432 PF00550 Phosphopantetheine attachment site AA314_04432 PF00501 AMP-binding enzyme AA314_04432 PF00668 Condensation domain AA314_04435 PF00501 AMP-binding enzyme AA314_04435 PF13193 AMP-binding enzyme C-terminal domain AA314_04435 PF13193 AMP-binding enzyme C-terminal domain AA314_04435 PF00668 Condensation domain AA314_04435 PF00501 AMP-binding enzyme AA314_04435 PF00668 Condensation domain AA314_04435 PF00550 Phosphopantetheine attachment site AA314_04435 PF00550 Phosphopantetheine attachment site AA314_04440 PF00158 Sigma-54 interaction domain AA314_04440 PF00072 Response regulator receiver domain AA314_04440 PF02954 Bacterial regulatory protein, Fis family AA314_04441 PF00118 TCP-1/cpn60 chaperonin family AA314_04442 PF00672 HAMP domain AA314_04442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04444 PF00990 Diguanylate cyclase, GGDEF domain AA314_04446 PF00486 Transcriptional regulatory protein, C terminal AA314_04446 PF00072 Response regulator receiver domain AA314_04447 PF08264 Anticodon-binding domain of tRNA AA314_04447 PF10458 Valyl tRNA synthetase tRNA binding arm AA314_04447 PF00133 tRNA synthetases class I (I, L, M and V) AA314_04448 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AA314_04448 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AA314_04450 PF03061 Thioesterase superfamily AA314_04451 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AA314_04455 PF03952 Enolase, N-terminal domain AA314_04455 PF00113 Enolase, C-terminal TIM barrel domain AA314_04456 PF01975 Survival protein SurE AA314_04457 PF01551 Peptidase family M23 AA314_04458 PF00232 Glycosyl hydrolase family 1 AA314_04464 PF00717 Peptidase S24-like AA314_04464 PF01726 LexA DNA binding domain AA314_04466 PF00672 HAMP domain AA314_04466 PF13426 PAS domain AA314_04466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04466 PF00512 His Kinase A (phospho-acceptor) domain AA314_04467 PF00072 Response regulator receiver domain AA314_04467 PF00512 His Kinase A (phospho-acceptor) domain AA314_04467 PF08448 PAS fold AA314_04467 PF13188 PAS domain AA314_04467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04477 PF13632 Glycosyl transferase family group 2 AA314_04477 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AA314_04479 PF00069 Protein kinase domain AA314_04480 PF00595 PDZ domain AA314_04481 PF00072 Response regulator receiver domain AA314_04481 PF00486 Transcriptional regulatory protein, C terminal AA314_04482 PF00491 Arginase family AA314_04483 PF01144 Coenzyme A transferase AA314_04484 PF03746 LamB/YcsF family AA314_04486 PF02626 Carboxyltransferase domain, subdomain A and B AA314_04487 PF02682 Carboxyltransferase domain, subdomain C and D AA314_04488 PF07286 Protein of unknown function (DUF1445) AA314_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_04490 PF03466 LysR substrate binding domain AA314_04493 PF03793 PASTA domain AA314_04493 PF00069 Protein kinase domain AA314_04494 PF11898 Domain of unknown function (DUF3418) AA314_04494 PF00271 Helicase conserved C-terminal domain AA314_04494 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AA314_04494 PF00270 DEAD/DEAH box helicase AA314_04494 PF04408 Helicase associated domain (HA2) AA314_04495 PF01156 Inosine-uridine preferring nucleoside hydrolase AA314_04497 PF00067 Cytochrome P450 AA314_04498 PF14765 Polyketide synthase dehydratase AA314_04498 PF00550 Phosphopantetheine attachment site AA314_04498 PF08659 KR domain AA314_04498 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_04498 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_04498 PF16197 Ketoacyl-synthetase C-terminal extension AA314_04498 PF08240 Alcohol dehydrogenase GroES-like domain AA314_04498 PF00698 Acyl transferase domain AA314_04505 PF00512 His Kinase A (phospho-acceptor) domain AA314_04505 PF18698 Histidine kinase sensor domain AA314_04505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04505 PF00672 HAMP domain AA314_04505 PF00989 PAS fold AA314_04511 PF00004 ATPase family associated with various cellular activities (AAA) AA314_04511 PF16450 Proteasomal ATPase OB C-terminal domain AA314_04511 PF17758 Proteasomal ATPase OB N-terminal domain AA314_04531 PF02954 Bacterial regulatory protein, Fis family AA314_04531 PF00158 Sigma-54 interaction domain AA314_04531 PF00072 Response regulator receiver domain AA314_04535 PF00459 Inositol monophosphatase family AA314_04542 PF04127 DNA / pantothenate metabolism flavoprotein AA314_04542 PF02441 Flavoprotein AA314_04543 PF03167 Uracil DNA glycosylase superfamily AA314_04546 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit AA314_04548 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase AA314_04548 PF02310 B12 binding domain AA314_04549 PF03061 Thioesterase superfamily AA314_04550 PF05853 beta-keto acid cleavage enzyme AA314_04552 PF00108 Thiolase, N-terminal domain AA314_04552 PF02803 Thiolase, C-terminal domain AA314_04553 PF17932 Tetracyclin repressor-like, C-terminal domain AA314_04553 PF00440 Bacterial regulatory proteins, tetR family AA314_04554 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_04554 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_04556 PF07690 Major Facilitator Superfamily AA314_04559 PF03781 Sulfatase-modifying factor enzyme 1 AA314_04565 PF13536 Putative multidrug resistance efflux transporter AA314_04570 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AA314_04571 PF00067 Cytochrome P450 AA314_04577 PF13426 PAS domain AA314_04577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04577 PF00072 Response regulator receiver domain AA314_04578 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04578 PF00360 Phytochrome region AA314_04578 PF00512 His Kinase A (phospho-acceptor) domain AA314_04578 PF08446 PAS fold AA314_04578 PF01590 GAF domain AA314_04581 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AA314_04583 PF00989 PAS fold AA314_04583 PF00512 His Kinase A (phospho-acceptor) domain AA314_04583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04583 PF16736 Single Cache-like AA314_04594 PF00196 Bacterial regulatory proteins, luxR family AA314_04594 PF00072 Response regulator receiver domain AA314_04602 PF01039 Carboxyl transferase domain AA314_04611 PF07715 TonB-dependent Receptor Plug Domain AA314_04611 PF00593 TonB dependent receptor AA314_04615 PF01171 PP-loop family AA314_04617 PF00004 ATPase family associated with various cellular activities (AAA) AA314_04617 PF17862 AAA+ lid domain AA314_04617 PF06480 FtsH Extracellular AA314_04617 PF01434 Peptidase family M41 AA314_04618 PF00809 Pterin binding enzyme AA314_04619 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AA314_04619 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AA314_04619 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AA314_04619 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AA314_04620 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AA314_04621 PF01648 4'-phosphopantetheinyl transferase superfamily AA314_04622 PF01256 Carbohydrate kinase AA314_04622 PF03853 YjeF-related protein N-terminus AA314_04623 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AA314_04627 PF00486 Transcriptional regulatory protein, C terminal AA314_04627 PF00072 Response regulator receiver domain AA314_04628 PF00989 PAS fold AA314_04628 PF00512 His Kinase A (phospho-acceptor) domain AA314_04628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04630 PF01979 Amidohydrolase family AA314_04631 PF17391 Urocanase N-terminal domain AA314_04631 PF01175 Urocanase Rossmann-like domain AA314_04631 PF17392 Urocanase C-terminal domain AA314_04632 PF00764 Arginosuccinate synthase AA314_04634 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_04634 PF14765 Polyketide synthase dehydratase AA314_04634 PF00550 Phosphopantetheine attachment site AA314_04634 PF00698 Acyl transferase domain AA314_04634 PF08240 Alcohol dehydrogenase GroES-like domain AA314_04634 PF08990 Erythronolide synthase docking AA314_04634 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_04634 PF08659 KR domain AA314_04634 PF16197 Ketoacyl-synthetase C-terminal extension AA314_04635 PF03576 Peptidase family S58 AA314_04636 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AA314_04636 PF00753 Metallo-beta-lactamase superfamily AA314_04636 PF10996 Beta-Casp domain AA314_04643 PF08534 Redoxin AA314_04644 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AA314_04644 PF01578 Cytochrome C assembly protein AA314_04645 PF03100 CcmE AA314_04647 PF01578 Cytochrome C assembly protein AA314_04649 PF00005 ABC transporter AA314_04659 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA314_04659 PF00529 HlyD membrane-fusion protein of T1SS AA314_04660 PF00873 AcrB/AcrD/AcrF family AA314_04668 PF02581 Thiamine monophosphate synthase AA314_04669 PF05690 Thiazole biosynthesis protein ThiG AA314_04675 PF00083 Sugar (and other) transporter AA314_04676 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04676 PF00512 His Kinase A (phospho-acceptor) domain AA314_04676 PF00989 PAS fold AA314_04676 PF16736 Single Cache-like AA314_04683 PF00075 RNase H AA314_04687 PF06745 KaiC AA314_04689 PF00486 Transcriptional regulatory protein, C terminal AA314_04689 PF00072 Response regulator receiver domain AA314_04691 PF00561 alpha/beta hydrolase fold AA314_04692 PF01544 CorA-like Mg2+ transporter protein AA314_04696 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_04696 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_04696 PF03413 Peptidase propeptide and YPEB domain AA314_04696 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_04698 PF17785 PUA-like domain AA314_04698 PF10672 S-adenosylmethionine-dependent methyltransferase AA314_04707 PF00082 Subtilase family AA314_04715 PF01553 Acyltransferase AA314_04716 PF05746 DALR anticodon binding domain AA314_04716 PF03485 Arginyl tRNA synthetase N terminal domain AA314_04716 PF00750 tRNA synthetases class I (R) AA314_04718 PF00989 PAS fold AA314_04718 PF00512 His Kinase A (phospho-acceptor) domain AA314_04718 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04720 PF00226 DnaJ domain AA314_04720 PF01556 DnaJ C terminal domain AA314_04723 PF00164 Ribosomal protein S12/S23 AA314_04724 PF00177 Ribosomal protein S7p/S5e AA314_04725 PF03144 Elongation factor Tu domain 2 AA314_04725 PF00009 Elongation factor Tu GTP binding domain AA314_04725 PF03764 Elongation factor G, domain IV AA314_04725 PF00679 Elongation factor G C-terminus AA314_04725 PF14492 Elongation Factor G, domain II AA314_04726 PF00009 Elongation factor Tu GTP binding domain AA314_04726 PF03143 Elongation factor Tu C-terminal domain AA314_04726 PF03144 Elongation factor Tu domain 2 AA314_04728 PF00338 Ribosomal protein S10p/S20e AA314_04729 PF00573 Ribosomal protein L4/L1 family AA314_04730 PF00276 Ribosomal protein L23 AA314_04731 PF00181 Ribosomal Proteins L2, RNA binding domain AA314_04731 PF03947 Ribosomal Proteins L2, C-terminal domain AA314_04732 PF00203 Ribosomal protein S19 AA314_04733 PF00237 Ribosomal protein L22p/L17e AA314_04734 PF00189 Ribosomal protein S3, C-terminal domain AA314_04734 PF07650 KH domain AA314_04735 PF00252 Ribosomal protein L16p/L10e AA314_04736 PF00831 Ribosomal L29 protein AA314_04737 PF00366 Ribosomal protein S17 AA314_04738 PF00238 Ribosomal protein L14p/L23e AA314_04739 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AA314_04740 PF00673 ribosomal L5P family C-terminus AA314_04740 PF00281 Ribosomal protein L5 AA314_04741 PF00253 Ribosomal protein S14p/S29e AA314_04742 PF00410 Ribosomal protein S8 AA314_04743 PF00347 Ribosomal protein L6 AA314_04744 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AA314_04745 PF03719 Ribosomal protein S5, C-terminal domain AA314_04745 PF00333 Ribosomal protein S5, N-terminal domain AA314_04746 PF00327 Ribosomal protein L30p/L7e AA314_04747 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AA314_04749 PF00344 SecY translocase AA314_04750 PF05191 Adenylate kinase, active site lid AA314_04751 PF00557 Metallopeptidase family M24 AA314_04752 PF01176 Translation initiation factor 1A / IF-1 AA314_04753 PF00444 Ribosomal protein L36 AA314_04754 PF00416 Ribosomal protein S13/S18 AA314_04755 PF00411 Ribosomal protein S11 AA314_04756 PF00163 Ribosomal protein S4/S9 N-terminal domain AA314_04756 PF01479 S4 domain AA314_04757 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AA314_04757 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AA314_04757 PF01000 RNA polymerase Rpb3/RpoA insert domain AA314_04758 PF01196 Ribosomal protein L17 AA314_04764 PF00072 Response regulator receiver domain AA314_04764 PF00158 Sigma-54 interaction domain AA314_04764 PF02954 Bacterial regulatory protein, Fis family AA314_04765 PF00892 EamA-like transporter family AA314_04767 PF04227 Indigoidine synthase A like protein AA314_04775 PF14718 Soluble lytic murein transglycosylase L domain AA314_04775 PF01464 Transglycosylase SLT domain AA314_04781 PF00990 Diguanylate cyclase, GGDEF domain AA314_04781 PF07694 5TMR of 5TMR-LYT AA314_04784 PF08676 MutL C terminal dimerisation domain AA314_04784 PF01119 DNA mismatch repair protein, C-terminal domain AA314_04789 PF00082 Subtilase family AA314_04789 PF05922 Peptidase inhibitor I9 AA314_04791 PF01062 Bestrophin, RFP-TM, chloride channel AA314_04794 PF01979 Amidohydrolase family AA314_04795 PF03561 Allantoicase repeat AA314_04796 PF00576 HIUase/Transthyretin family AA314_04797 PF04115 Ureidoglycolate lyase AA314_04799 PF01774 UreD urease accessory protein AA314_04800 PF00699 Urease beta subunit AA314_04800 PF00547 Urease, gamma subunit AA314_04801 PF00449 Urease alpha-subunit, N-terminal domain AA314_04801 PF01979 Amidohydrolase family AA314_04802 PF01730 UreF AA314_04803 PF02492 CobW/HypB/UreG, nucleotide-binding domain AA314_04804 PF04199 Putative cyclase AA314_04805 PF00703 Glycosyl hydrolases family 2 AA314_04805 PF02837 Glycosyl hydrolases family 2, sugar binding domain AA314_04805 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AA314_04808 PF03449 Transcription elongation factor, N-terminal AA314_04808 PF01272 Transcription elongation factor, GreA/GreB, C-term AA314_04809 PF17191 RecG wedge domain AA314_04809 PF00270 DEAD/DEAH box helicase AA314_04809 PF00271 Helicase conserved C-terminal domain AA314_04811 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04811 PF09308 LuxQ, periplasmic AA314_04811 PF00072 Response regulator receiver domain AA314_04811 PF00512 His Kinase A (phospho-acceptor) domain AA314_04817 PF01411 tRNA synthetases class II (A) AA314_04817 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AA314_04817 PF02272 DHHA1 domain AA314_04822 PF00291 Pyridoxal-phosphate dependent enzyme AA314_04826 PF02223 Thymidylate kinase AA314_04827 PF02464 Competence-damaged protein AA314_04827 PF18146 Damage-inducible protein CinA KH domain AA314_04827 PF00994 Probable molybdopterin binding domain AA314_04828 PF00027 Cyclic nucleotide-binding domain AA314_04828 PF13545 Crp-like helix-turn-helix domain AA314_04830 PF13520 Amino acid permease AA314_04831 PF01336 OB-fold nucleic acid binding domain AA314_04831 PF00152 tRNA synthetases class II (D, K and N) AA314_04834 PF02630 SCO1/SenC AA314_04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04835 PF00512 His Kinase A (phospho-acceptor) domain AA314_04837 PF00378 Enoyl-CoA hydratase/isomerase AA314_04842 PF00196 Bacterial regulatory proteins, luxR family AA314_04853 PF00072 Response regulator receiver domain AA314_04853 PF00990 Diguanylate cyclase, GGDEF domain AA314_04861 PF00691 OmpA family AA314_04861 PF05736 OprF membrane domain AA314_04865 PF00025 ADP-ribosylation factor family AA314_04867 PF04754 Putative transposase, YhgA-like AA314_04869 PF07995 Glucose / Sorbosone dehydrogenase AA314_04872 PF04055 Radical SAM superfamily AA314_04872 PF13186 Iron-sulfur cluster-binding domain AA314_04886 PF00069 Protein kinase domain AA314_04886 PF03793 PASTA domain AA314_04888 PF04754 Putative transposase, YhgA-like AA314_04894 PF00128 Alpha amylase, catalytic domain AA314_04894 PF02903 Alpha amylase, N-terminal ig-like domain AA314_04894 PF16657 Maltogenic Amylase, C-terminal domain AA314_04898 PF07690 Major Facilitator Superfamily AA314_04901 PF01709 Transcriptional regulator AA314_04904 PF17941 Polyphosphate kinase C-terminal domain 1 AA314_04904 PF13089 Polyphosphate kinase N-terminal domain AA314_04904 PF02503 Polyphosphate kinase middle domain AA314_04904 PF13090 Polyphosphate kinase C-terminal domain 2 AA314_04908 PF12704 MacB-like periplasmic core domain AA314_04908 PF00005 ABC transporter AA314_04908 PF02687 FtsX-like permease family AA314_04909 PF12706 Beta-lactamase superfamily domain AA314_04911 PF13302 Acetyltransferase (GNAT) domain AA314_04912 PF00067 Cytochrome P450 AA314_04913 PF00665 Integrase core domain AA314_04913 PF13333 Integrase core domain AA314_04913 PF13276 HTH-like domain AA314_04914 PF00182 Chitinase class I AA314_04919 PF04972 BON domain AA314_04919 PF00691 OmpA family AA314_04921 PF04101 Glycosyltransferase family 28 C-terminal domain AA314_04924 PF07478 D-ala D-ala ligase C-terminus AA314_04929 PF00512 His Kinase A (phospho-acceptor) domain AA314_04929 PF00989 PAS fold AA314_04929 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_04934 PF00221 Aromatic amino acid lyase AA314_04935 PF00696 Amino acid kinase family AA314_04935 PF01842 ACT domain AA314_04935 PF13840 ACT domain AA314_04944 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA314_04948 PF13361 UvrD-like helicase C-terminal domain AA314_04948 PF00580 UvrD/REP helicase N-terminal domain AA314_04949 PF00012 Hsp70 protein AA314_04952 PF03741 Integral membrane protein TerC family AA314_04953 PF01435 Peptidase family M48 AA314_04955 PF00355 Rieske [2Fe-2S] domain AA314_04959 PF00535 Glycosyl transferase family 2 AA314_04962 PF14592 Chondroitinase B AA314_04963 PF00535 Glycosyl transferase family 2 AA314_04965 PF01648 4'-phosphopantetheinyl transferase superfamily AA314_04966 PF00975 Thioesterase domain AA314_04969 PF01609 Transposase DDE domain AA314_04970 PF16363 GDP-mannose 4,6 dehydratase AA314_04973 PF03275 UDP-galactopyranose mutase AA314_04975 PF00288 GHMP kinases N terminal domain AA314_04975 PF10509 Galactokinase galactose-binding signature AA314_04975 PF08544 GHMP kinases C terminal AA314_04976 PF00703 Glycosyl hydrolases family 2 AA314_04976 PF02837 Glycosyl hydrolases family 2, sugar binding domain AA314_04976 PF16353 Domain of unknown function(DUF4981) AA314_04976 PF02929 Beta galactosidase small chain AA314_04976 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AA314_04979 PF00005 ABC transporter AA314_04979 PF00664 ABC transporter transmembrane region AA314_04981 PF01266 FAD dependent oxidoreductase AA314_04983 PF00106 short chain dehydrogenase AA314_04985 PF00106 short chain dehydrogenase AA314_04986 PF00501 AMP-binding enzyme AA314_04986 PF13193 AMP-binding enzyme C-terminal domain AA314_04986 PF00975 Thioesterase domain AA314_04986 PF00668 Condensation domain AA314_04986 PF00550 Phosphopantetheine attachment site AA314_04987 PF13193 AMP-binding enzyme C-terminal domain AA314_04987 PF00501 AMP-binding enzyme AA314_04987 PF00668 Condensation domain AA314_04987 PF00550 Phosphopantetheine attachment site AA314_04987 PF00975 Thioesterase domain AA314_04990 PF04715 Anthranilate synthase component I, N terminal region AA314_04990 PF00117 Glutamine amidotransferase class-I AA314_04990 PF00425 chorismate binding enzyme AA314_04993 PF00155 Aminotransferase class I and II AA314_04993 PF00392 Bacterial regulatory proteins, gntR family AA314_04995 PF00999 Sodium/hydrogen exchanger family AA314_04996 PF01743 Poly A polymerase head domain AA314_04996 PF12627 Probable RNA and SrmB- binding site of polymerase A AA314_04996 PF13735 tRNA nucleotidyltransferase domain 2 putative AA314_04999 PF01238 Phosphomannose isomerase type I AA314_05002 PF01370 NAD dependent epimerase/dehydratase family AA314_05003 PF16363 GDP-mannose 4,6 dehydratase AA314_05004 PF00009 Elongation factor Tu GTP binding domain AA314_05004 PF06421 GTP-binding protein LepA C-terminus AA314_05004 PF00679 Elongation factor G C-terminus AA314_05004 PF03144 Elongation factor Tu domain 2 AA314_05005 PF10502 Signal peptidase, peptidase S26 AA314_05007 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AA314_05007 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AA314_05008 PF01979 Amidohydrolase family AA314_05009 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AA314_05009 PF00117 Glutamine amidotransferase class-I AA314_05011 PF02887 Pyruvate kinase, alpha/beta domain AA314_05011 PF00224 Pyruvate kinase, barrel domain AA314_05011 PF00391 PEP-utilising enzyme, mobile domain AA314_05014 PF00501 AMP-binding enzyme AA314_05015 PF00285 Citrate synthase, C-terminal domain AA314_05018 PF01761 3-dehydroquinate synthase AA314_05019 PF01264 Chorismate synthase AA314_05020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AA314_05020 PF01488 Shikimate / quinate 5-dehydrogenase AA314_05020 PF08501 Shikimate dehydrogenase substrate binding domain AA314_05021 PF01761 3-dehydroquinate synthase AA314_05021 PF01202 Shikimate kinase AA314_05022 PF01209 ubiE/COQ5 methyltransferase family AA314_05023 PF01817 Chorismate mutase type II AA314_05023 PF00793 DAHP synthetase I family AA314_05024 PF00425 chorismate binding enzyme AA314_05025 PF04715 Anthranilate synthase component I, N terminal region AA314_05025 PF00425 chorismate binding enzyme AA314_05026 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AA314_05026 PF16582 Middle domain of thiamine pyrophosphate AA314_05026 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA314_05028 PF01040 UbiA prenyltransferase family AA314_05029 PF13378 Enolase C-terminal domain-like AA314_05029 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AA314_05030 PF00501 AMP-binding enzyme AA314_05030 PF13193 AMP-binding enzyme C-terminal domain AA314_05032 PF00437 Type II/IV secretion system protein AA314_05033 PF00069 Protein kinase domain AA314_05037 PF13280 WYL domain AA314_05037 PF08279 HTH domain AA314_05040 PF00180 Isocitrate/isopropylmalate dehydrogenase AA314_05041 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AA314_05041 PF00056 lactate/malate dehydrogenase, NAD binding domain AA314_05042 PF00890 FAD binding domain AA314_05042 PF02910 Fumarate reductase flavoprotein C-term AA314_05043 PF13183 4Fe-4S dicluster domain AA314_05043 PF13085 2Fe-2S iron-sulfur cluster binding domain AA314_05044 PF00549 CoA-ligase AA314_05044 PF08442 ATP-grasp domain AA314_05045 PF00549 CoA-ligase AA314_05045 PF02629 CoA binding domain AA314_05046 PF00334 Nucleoside diphosphate kinase AA314_05047 PF04055 Radical SAM superfamily AA314_05048 PF00886 Ribosomal protein S16 AA314_05050 PF01782 RimM N-terminal domain AA314_05050 PF05239 PRC-barrel domain AA314_05051 PF01746 tRNA (Guanine-1)-methyltransferase AA314_05052 PF01245 Ribosomal protein L19 AA314_05054 PF02021 Uncharacterised protein family UPF0102 AA314_05055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA314_05057 PF08460 Bacterial SH3 domain AA314_05057 PF01551 Peptidase family M23 AA314_05058 PF00158 Sigma-54 interaction domain AA314_05058 PF00072 Response regulator receiver domain AA314_05058 PF02954 Bacterial regulatory protein, Fis family AA314_05061 PF03023 Lipid II flippase MurJ AA314_05062 PF00575 S1 RNA binding domain AA314_05065 PF17755 UvrA DNA-binding domain AA314_05070 PF17864 RuvB AAA lid domain AA314_05070 PF05491 RuvB C-terminal winged helix domain AA314_05070 PF05496 Holliday junction DNA helicase RuvB P-loop domain AA314_05072 PF00487 Fatty acid desaturase AA314_05074 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05074 PF00989 PAS fold AA314_05074 PF00512 His Kinase A (phospho-acceptor) domain AA314_05079 PF18801 response regulator aspartate phosphatase H, N terminal AA314_05080 PF00069 Protein kinase domain AA314_05081 PF00072 Response regulator receiver domain AA314_05081 PF00158 Sigma-54 interaction domain AA314_05085 PF00069 Protein kinase domain AA314_05086 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05086 PF00360 Phytochrome region AA314_05086 PF00512 His Kinase A (phospho-acceptor) domain AA314_05086 PF01590 GAF domain AA314_05086 PF08446 PAS fold AA314_05092 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AA314_05101 PF01804 Penicillin amidase AA314_05106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05106 PF00512 His Kinase A (phospho-acceptor) domain AA314_05113 PF01594 AI-2E family transporter AA314_05114 PF18011 C-terminal domain found in long catalases AA314_05114 PF06628 Catalase-related immune-responsive AA314_05114 PF00199 Catalase AA314_05117 PF05221 S-adenosyl-L-homocysteine hydrolase AA314_05117 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AA314_05125 PF00092 von Willebrand factor type A domain AA314_05125 PF12450 von Willebrand factor AA314_05125 PF12034 Domain of unknown function (DUF3520) AA314_05128 PF03851 UV-endonuclease UvdE AA314_05129 PF03851 UV-endonuclease UvdE AA314_05131 PF00313 'Cold-shock' DNA-binding domain AA314_05138 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AA314_05138 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_05143 PF01594 AI-2E family transporter AA314_05144 PF03167 Uracil DNA glycosylase superfamily AA314_05145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AA314_05145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AA314_05145 PF02824 TGS domain AA314_05145 PF03129 Anticodon binding domain AA314_05146 PF00707 Translation initiation factor IF-3, C-terminal domain AA314_05146 PF05198 Translation initiation factor IF-3, N-terminal domain AA314_05147 PF01632 Ribosomal protein L35 AA314_05148 PF00453 Ribosomal protein L20 AA314_05149 PF01409 tRNA synthetases class II core domain (F) AA314_05149 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AA314_05150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AA314_05150 PF01588 Putative tRNA binding domain AA314_05150 PF03147 Ferredoxin-fold anticodon binding domain AA314_05150 PF03484 tRNA synthetase B5 domain AA314_05150 PF03483 B3/4 domain AA314_05151 PF00216 Bacterial DNA-binding protein AA314_05153 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA314_05154 PF00664 ABC transporter transmembrane region AA314_05154 PF00005 ABC transporter AA314_05154 PF03412 Peptidase C39 family AA314_05155 PF00668 Condensation domain AA314_05155 PF13193 AMP-binding enzyme C-terminal domain AA314_05155 PF00501 AMP-binding enzyme AA314_05155 PF00550 Phosphopantetheine attachment site AA314_05156 PF13193 AMP-binding enzyme C-terminal domain AA314_05156 PF07993 Male sterility protein AA314_05156 PF00501 AMP-binding enzyme AA314_05156 PF00550 Phosphopantetheine attachment site AA314_05156 PF00668 Condensation domain AA314_05157 PF00501 AMP-binding enzyme AA314_05157 PF13193 AMP-binding enzyme C-terminal domain AA314_05157 PF00668 Condensation domain AA314_05157 PF00550 Phosphopantetheine attachment site AA314_05157 PF00975 Thioesterase domain AA314_05158 PF00672 HAMP domain AA314_05158 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_05158 PF17200 Single Cache domain 2 AA314_05160 PF01209 ubiE/COQ5 methyltransferase family AA314_05161 PF14521 Lysine-specific metallo-endopeptidase AA314_05167 PF00528 Binding-protein-dependent transport system inner membrane component AA314_05168 PF00005 ABC transporter AA314_05173 PF00561 alpha/beta hydrolase fold AA314_05174 PF00440 Bacterial regulatory proteins, tetR family AA314_05175 PF00005 ABC transporter AA314_05181 PF07715 TonB-dependent Receptor Plug Domain AA314_05181 PF00593 TonB dependent receptor AA314_05182 PF00133 tRNA synthetases class I (I, L, M and V) AA314_05182 PF08264 Anticodon-binding domain of tRNA AA314_05185 PF13493 Domain of unknown function (DUF4118) AA314_05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05185 PF00512 His Kinase A (phospho-acceptor) domain AA314_05185 PF02702 Osmosensitive K+ channel His kinase sensor domain AA314_05185 PF00582 Universal stress protein family AA314_05188 PF00437 Type II/IV secretion system protein AA314_05192 PF14760 Rnk N-terminus AA314_05192 PF01272 Transcription elongation factor, GreA/GreB, C-term AA314_05199 PF00348 Polyprenyl synthetase AA314_05206 PF00255 Glutathione peroxidase AA314_05209 PF01522 Polysaccharide deacetylase AA314_05222 PF00561 alpha/beta hydrolase fold AA314_05225 PF02397 Bacterial sugar transferase AA314_05227 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_05230 PF12680 SnoaL-like domain AA314_05231 PF01370 NAD dependent epimerase/dehydratase family AA314_05232 PF07859 alpha/beta hydrolase fold AA314_05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05240 PF00512 His Kinase A (phospho-acceptor) domain AA314_05241 PF00668 Condensation domain AA314_05241 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_05241 PF08659 KR domain AA314_05241 PF13193 AMP-binding enzyme C-terminal domain AA314_05241 PF00501 AMP-binding enzyme AA314_05241 PF14765 Polyketide synthase dehydratase AA314_05241 PF00550 Phosphopantetheine attachment site AA314_05241 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_05241 PF16197 Ketoacyl-synthetase C-terminal extension AA314_05243 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_05245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA314_05245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA314_05249 PF01494 FAD binding domain AA314_05252 PF00069 Protein kinase domain AA314_05252 PF08308 PEGA domain AA314_05253 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_05253 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_05253 PF00550 Phosphopantetheine attachment site AA314_05253 PF08990 Erythronolide synthase docking AA314_05253 PF00975 Thioesterase domain AA314_05253 PF16197 Ketoacyl-synthetase C-terminal extension AA314_05253 PF08659 KR domain AA314_05253 PF00698 Acyl transferase domain AA314_05253 PF18369 Polyketide synthase dimerisation element domain AA314_05256 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA314_05256 PF02806 Alpha amylase, C-terminal all-beta domain AA314_05256 PF00128 Alpha amylase, catalytic domain AA314_05257 PF18085 Maltokinase N-terminal cap domain AA314_05258 PF16657 Maltogenic Amylase, C-terminal domain AA314_05258 PF00128 Alpha amylase, catalytic domain AA314_05259 PF00128 Alpha amylase, catalytic domain AA314_05259 PF11896 Domain of unknown function (DUF3416) AA314_05269 PF01475 Ferric uptake regulator family AA314_05271 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05271 PF00512 His Kinase A (phospho-acceptor) domain AA314_05271 PF00672 HAMP domain AA314_05271 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AA314_05271 PF08448 PAS fold AA314_05274 PF07694 5TMR of 5TMR-LYT AA314_05274 PF00990 Diguanylate cyclase, GGDEF domain AA314_05275 PF04445 Putative SAM-dependent methyltransferase AA314_05276 PF14245 Type IV pilin PilA AA314_05276 PF07963 Prokaryotic N-terminal methylation motif AA314_05281 PF00069 Protein kinase domain AA314_05282 PF00072 Response regulator receiver domain AA314_05282 PF00196 Bacterial regulatory proteins, luxR family AA314_05283 PF00067 Cytochrome P450 AA314_05289 PF01204 Trehalase AA314_05290 PF02463 RecF/RecN/SMC N terminal domain AA314_05295 PF07676 WD40-like Beta Propeller Repeat AA314_05298 PF08448 PAS fold AA314_05298 PF00990 Diguanylate cyclase, GGDEF domain AA314_05298 PF13426 PAS domain AA314_05298 PF00563 EAL domain AA314_05298 PF05231 MASE1 AA314_05298 PF08447 PAS fold AA314_05301 PF13188 PAS domain AA314_05301 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05301 PF00512 His Kinase A (phospho-acceptor) domain AA314_05301 PF00989 PAS fold AA314_05301 PF13426 PAS domain AA314_05303 PF00067 Cytochrome P450 AA314_05305 PF00067 Cytochrome P450 AA314_05311 PF00675 Insulinase (Peptidase family M16) AA314_05311 PF05193 Peptidase M16 inactive domain AA314_05313 PF00849 RNA pseudouridylate synthase AA314_05315 PF03450 CO dehydrogenase flavoprotein C-terminal domain AA314_05315 PF00941 FAD binding domain in molybdopterin dehydrogenase AA314_05316 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AA314_05316 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AA314_05317 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_05317 PF01799 [2Fe-2S] binding domain AA314_05320 PF12419 SNF2 Helicase protein AA314_05320 PF00271 Helicase conserved C-terminal domain AA314_05320 PF00176 SNF2 family N-terminal domain AA314_05322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_05322 PF03466 LysR substrate binding domain AA314_05323 PF00892 EamA-like transporter family AA314_05329 PF02405 Permease MlaE AA314_05330 PF00005 ABC transporter AA314_05337 PF02666 Phosphatidylserine decarboxylase AA314_05338 PF13393 Histidyl-tRNA synthetase AA314_05338 PF03129 Anticodon binding domain AA314_05348 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05348 PF00512 His Kinase A (phospho-acceptor) domain AA314_05351 PF01627 Hpt domain AA314_05351 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05351 PF00512 His Kinase A (phospho-acceptor) domain AA314_05351 PF00072 Response regulator receiver domain AA314_05352 PF00072 Response regulator receiver domain AA314_05352 PF00990 Diguanylate cyclase, GGDEF domain AA314_05355 PF01029 NusB family AA314_05355 PF01189 16S rRNA methyltransferase RsmB/F AA314_05357 PF00348 Polyprenyl synthetase AA314_05358 PF01791 DeoC/LacD family aldolase AA314_05361 PF00155 Aminotransferase class I and II AA314_05361 PF13480 Acetyltransferase (GNAT) domain AA314_05363 PF03176 MMPL family AA314_05365 PF00155 Aminotransferase class I and II AA314_05367 PF00682 HMGL-like AA314_05368 PF01642 Methylmalonyl-CoA mutase AA314_05368 PF02310 B12 binding domain AA314_05369 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AA314_05369 PF01476 LysM domain AA314_05376 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_05376 PF00400 WD domain, G-beta repeat AA314_05381 PF00378 Enoyl-CoA hydratase/isomerase AA314_05382 PF00512 His Kinase A (phospho-acceptor) domain AA314_05382 PF08446 PAS fold AA314_05382 PF00360 Phytochrome region AA314_05382 PF01590 GAF domain AA314_05382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05383 PF00072 Response regulator receiver domain AA314_05390 PF00005 ABC transporter AA314_05393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05393 PF00512 His Kinase A (phospho-acceptor) domain AA314_05393 PF13493 Domain of unknown function (DUF4118) AA314_05393 PF02702 Osmosensitive K+ channel His kinase sensor domain AA314_05394 PF05649 Peptidase family M13 AA314_05394 PF01431 Peptidase family M13 AA314_05397 PF02423 Ornithine cyclodeaminase/mu-crystallin family AA314_05398 PF08669 Glycine cleavage T-protein C-terminal barrel domain AA314_05398 PF01266 FAD dependent oxidoreductase AA314_05398 PF01571 Aminomethyltransferase folate-binding domain AA314_05398 PF16350 FAD dependent oxidoreductase central domain AA314_05399 PF00171 Aldehyde dehydrogenase family AA314_05401 PF00892 EamA-like transporter family AA314_05406 PF00067 Cytochrome P450 AA314_05415 PF07885 Ion channel AA314_05415 PF00027 Cyclic nucleotide-binding domain AA314_05418 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_05418 PF00400 WD domain, G-beta repeat AA314_05423 PF06441 Epoxide hydrolase N terminus AA314_05424 PF00144 Beta-lactamase AA314_05425 PF01638 HxlR-like helix-turn-helix AA314_05427 PF02743 Cache domain AA314_05427 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_05427 PF00672 HAMP domain AA314_05431 PF05922 Peptidase inhibitor I9 AA314_05431 PF00082 Subtilase family AA314_05432 PF01625 Peptide methionine sulfoxide reductase AA314_05436 PF06483 Chitinase C AA314_05436 PF00704 Glycosyl hydrolases family 18 AA314_05437 PF00082 Subtilase family AA314_05437 PF05922 Peptidase inhibitor I9 AA314_05440 PF01494 FAD binding domain AA314_05446 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AA314_05446 PF00391 PEP-utilising enzyme, mobile domain AA314_05449 PF12697 Alpha/beta hydrolase family AA314_05451 PF00512 His Kinase A (phospho-acceptor) domain AA314_05451 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05451 PF13188 PAS domain AA314_05451 PF00072 Response regulator receiver domain AA314_05451 PF08448 PAS fold AA314_05452 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA314_05452 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA314_05452 PF01842 ACT domain AA314_05462 PF01039 Carboxyl transferase domain AA314_05463 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_05463 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_05463 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_05464 PF14622 Ribonuclease-III-like AA314_05464 PF00035 Double-stranded RNA binding motif AA314_05465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AA314_05466 PF07650 KH domain AA314_05466 PF01926 50S ribosome-binding GTPase AA314_05467 PF01926 50S ribosome-binding GTPase AA314_05467 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AA314_05470 PF00293 NUDIX domain AA314_05472 PF08308 PEGA domain AA314_05472 PF00069 Protein kinase domain AA314_05474 PF10459 Peptidase S46 AA314_05475 PF00958 GMP synthase C terminal domain AA314_05475 PF00117 Glutamine amidotransferase class-I AA314_05477 PF00571 CBS domain AA314_05477 PF00478 IMP dehydrogenase / GMP reductase domain AA314_05478 PF00012 Hsp70 protein AA314_05479 PF09335 SNARE associated Golgi protein AA314_05480 PF00027 Cyclic nucleotide-binding domain AA314_05480 PF13545 Crp-like helix-turn-helix domain AA314_05481 PF00132 Bacterial transferase hexapeptide (six repeats) AA314_05482 PF01938 TRAM domain AA314_05482 PF04055 Radical SAM superfamily AA314_05482 PF00919 Uncharacterized protein family UPF0004 AA314_05488 PF01242 6-pyruvoyl tetrahydropterin synthase AA314_05489 PF01938 TRAM domain AA314_05489 PF05958 tRNA (Uracil-5-)-methyltransferase AA314_05490 PF01144 Coenzyme A transferase AA314_05491 PF01144 Coenzyme A transferase AA314_05492 PF00108 Thiolase, N-terminal domain AA314_05492 PF02803 Thiolase, C-terminal domain AA314_05493 PF00575 S1 RNA binding domain AA314_05494 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_05494 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_05494 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_05496 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_05496 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_05496 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_05497 PF00378 Enoyl-CoA hydratase/isomerase AA314_05498 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AA314_05498 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AA314_05501 PF10609 NUBPL iron-transfer P-loop NTPase AA314_05501 PF01883 Iron-sulfur cluster assembly protein AA314_05503 PF01343 Peptidase family S49 AA314_05511 PF00005 ABC transporter AA314_05512 PF00478 IMP dehydrogenase / GMP reductase domain AA314_05512 PF00571 CBS domain AA314_05514 PF00216 Bacterial DNA-binding protein AA314_05518 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_05518 PF01799 [2Fe-2S] binding domain AA314_05519 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AA314_05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_05520 PF03466 LysR substrate binding domain AA314_05521 PF00698 Acyl transferase domain AA314_05521 PF08240 Alcohol dehydrogenase GroES-like domain AA314_05521 PF00550 Phosphopantetheine attachment site AA314_05521 PF08659 KR domain AA314_05521 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_05521 PF16197 Ketoacyl-synthetase C-terminal extension AA314_05521 PF00107 Zinc-binding dehydrogenase AA314_05521 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_05521 PF14765 Polyketide synthase dehydratase AA314_05523 PF01207 Dihydrouridine synthase (Dus) AA314_05524 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AA314_05524 PF00271 Helicase conserved C-terminal domain AA314_05524 PF04408 Helicase associated domain (HA2) AA314_05524 PF11898 Domain of unknown function (DUF3418) AA314_05524 PF00270 DEAD/DEAH box helicase AA314_05525 PF00270 DEAD/DEAH box helicase AA314_05525 PF00271 Helicase conserved C-terminal domain AA314_05525 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AA314_05525 PF04408 Helicase associated domain (HA2) AA314_05525 PF11898 Domain of unknown function (DUF3418) AA314_05526 PF04229 GrpB protein AA314_05529 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05533 PF01266 FAD dependent oxidoreductase AA314_05534 PF00067 Cytochrome P450 AA314_05536 PF00072 Response regulator receiver domain AA314_05536 PF00196 Bacterial regulatory proteins, luxR family AA314_05538 PF01053 Cys/Met metabolism PLP-dependent enzyme AA314_05541 PF01738 Dienelactone hydrolase family AA314_05547 PF13732 Domain of unknown function (DUF4162) AA314_05547 PF00005 ABC transporter AA314_05549 PF00873 AcrB/AcrD/AcrF family AA314_05550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA314_05550 PF00529 HlyD membrane-fusion protein of T1SS AA314_05554 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_05554 PF03413 Peptidase propeptide and YPEB domain AA314_05554 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_05554 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_05555 PF01676 Metalloenzyme superfamily AA314_05555 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AA314_05559 PF01554 MatE AA314_05562 PF00106 short chain dehydrogenase AA314_05563 PF00909 Ammonium Transporter Family AA314_05565 PF00795 Carbon-nitrogen hydrolase AA314_05568 PF08279 HTH domain AA314_05568 PF13280 WYL domain AA314_05571 PF00989 PAS fold AA314_05571 PF11808 Phosphate regulon sensor protein PhoR AA314_05571 PF00512 His Kinase A (phospho-acceptor) domain AA314_05571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05572 PF00486 Transcriptional regulatory protein, C terminal AA314_05572 PF00072 Response regulator receiver domain AA314_05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05575 PF00512 His Kinase A (phospho-acceptor) domain AA314_05575 PF00989 PAS fold AA314_05582 PF00730 HhH-GPD superfamily base excision DNA repair protein AA314_05582 PF00633 Helix-hairpin-helix motif AA314_05586 PF00392 Bacterial regulatory proteins, gntR family AA314_05586 PF00155 Aminotransferase class I and II AA314_05588 PF00440 Bacterial regulatory proteins, tetR family AA314_05588 PF13977 BetI-type transcriptional repressor, C-terminal AA314_05592 PF00067 Cytochrome P450 AA314_05594 PF05199 GMC oxidoreductase AA314_05594 PF00732 GMC oxidoreductase AA314_05595 PF05199 GMC oxidoreductase AA314_05600 PF18698 Histidine kinase sensor domain AA314_05600 PF00512 His Kinase A (phospho-acceptor) domain AA314_05600 PF00672 HAMP domain AA314_05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05602 PF12161 HsdM N-terminal domain AA314_05602 PF02384 N-6 DNA Methylase AA314_05603 PF00512 His Kinase A (phospho-acceptor) domain AA314_05603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05604 PF00486 Transcriptional regulatory protein, C terminal AA314_05604 PF00072 Response regulator receiver domain AA314_05608 PF13520 Amino acid permease AA314_05610 PF07690 Major Facilitator Superfamily AA314_05610 PF00083 Sugar (and other) transporter AA314_05625 PF00004 ATPase family associated with various cellular activities (AAA) AA314_05625 PF07724 AAA domain (Cdc48 subfamily) AA314_05625 PF17871 AAA lid domain AA314_05625 PF02861 Clp amino terminal domain, pathogenicity island component AA314_05625 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_05626 PF02861 Clp amino terminal domain, pathogenicity island component AA314_05626 PF17871 AAA lid domain AA314_05626 PF07724 AAA domain (Cdc48 subfamily) AA314_05626 PF00004 ATPase family associated with various cellular activities (AAA) AA314_05626 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_05627 PF00004 ATPase family associated with various cellular activities (AAA) AA314_05627 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_05627 PF02861 Clp amino terminal domain, pathogenicity island component AA314_05627 PF07724 AAA domain (Cdc48 subfamily) AA314_05627 PF17871 AAA lid domain AA314_05638 PF01137 RNA 3'-terminal phosphate cyclase AA314_05638 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AA314_05641 PF07885 Ion channel AA314_05641 PF00027 Cyclic nucleotide-binding domain AA314_05643 PF00849 RNA pseudouridylate synthase AA314_05643 PF01479 S4 domain AA314_05644 PF04079 Segregation and condensation complex subunit ScpB AA314_05645 PF02616 Segregation and condensation protein ScpA AA314_05646 PF00579 tRNA synthetases class I (W and Y) AA314_05650 PF00589 Phage integrase family AA314_05650 PF02899 Phage integrase, N-terminal SAM-like domain AA314_05655 PF00069 Protein kinase domain AA314_05655 PF03793 PASTA domain AA314_05659 PF04072 Leucine carboxyl methyltransferase AA314_05660 PF01300 Telomere recombination AA314_05661 PF02254 TrkA-N domain AA314_05661 PF00999 Sodium/hydrogen exchanger family AA314_05666 PF08335 GlnD PII-uridylyltransferase AA314_05666 PF01909 Nucleotidyltransferase domain AA314_05666 PF01966 HD domain AA314_05675 PF01520 N-acetylmuramoyl-L-alanine amidase AA314_05678 PF18415 Histidine kinase receptor ArcB trans-membrane domain AA314_05678 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05678 PF01627 Hpt domain AA314_05678 PF00989 PAS fold AA314_05678 PF00512 His Kinase A (phospho-acceptor) domain AA314_05678 PF00072 Response regulator receiver domain AA314_05681 PF02927 Cellulase N-terminal ig-like domain AA314_05681 PF00759 Glycosyl hydrolase family 9 AA314_05681 PF00801 PKD domain AA314_05681 PF00553 Cellulose binding domain AA314_05681 PF02013 Cellulose or protein binding domain AA314_05682 PF13569 Domain of unknown function (DUF4132) AA314_05683 PF01070 FMN-dependent dehydrogenase AA314_05684 PF00512 His Kinase A (phospho-acceptor) domain AA314_05684 PF00989 PAS fold AA314_05684 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05684 PF01627 Hpt domain AA314_05684 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_05684 PF00072 Response regulator receiver domain AA314_05685 PF07728 AAA domain (dynein-related subfamily) AA314_05687 PF05762 VWA domain containing CoxE-like protein AA314_05690 PF03551 Transcriptional regulator PadR-like family AA314_05691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05691 PF18698 Histidine kinase sensor domain AA314_05691 PF00672 HAMP domain AA314_05691 PF00512 His Kinase A (phospho-acceptor) domain AA314_05691 PF00989 PAS fold AA314_05693 PF00557 Metallopeptidase family M24 AA314_05693 PF01321 Creatinase/Prolidase N-terminal domain AA314_05697 PF01207 Dihydrouridine synthase (Dus) AA314_05701 PF10282 Lactonase, 7-bladed beta-propeller AA314_05702 PF00072 Response regulator receiver domain AA314_05702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05731 PF00691 OmpA family AA314_05735 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_05736 PF05192 MutS domain III AA314_05736 PF00488 MutS domain V AA314_05736 PF01624 MutS domain I AA314_05736 PF05188 MutS domain II AA314_05736 PF05190 MutS family domain IV AA314_05737 PF06965 Na+/H+ antiporter 1 AA314_05739 PF03109 ABC1 family AA314_05741 PF00069 Protein kinase domain AA314_05742 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_05742 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_05742 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_05742 PF03413 Peptidase propeptide and YPEB domain AA314_05743 PF03413 Peptidase propeptide and YPEB domain AA314_05743 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_05743 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_05743 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_05745 PF00873 AcrB/AcrD/AcrF family AA314_05746 PF13533 Biotin-lipoyl like AA314_05749 PF09383 NIL domain AA314_05749 PF00005 ABC transporter AA314_05750 PF02405 Permease MlaE AA314_05753 PF04542 Sigma-70 region 2 AA314_05753 PF08281 Sigma-70, region 4 AA314_05760 PF02405 Permease MlaE AA314_05762 PF00005 ABC transporter AA314_05763 PF02470 MlaD protein AA314_05767 PF00753 Metallo-beta-lactamase superfamily AA314_05767 PF12706 Beta-lactamase superfamily domain AA314_05768 PF01590 GAF domain AA314_05768 PF02954 Bacterial regulatory protein, Fis family AA314_05768 PF00158 Sigma-54 interaction domain AA314_05769 PF00005 ABC transporter AA314_05770 PF00528 Binding-protein-dependent transport system inner membrane component AA314_05773 PF00512 His Kinase A (phospho-acceptor) domain AA314_05773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05776 PF03793 PASTA domain AA314_05776 PF00069 Protein kinase domain AA314_05777 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_05779 PF01142 tRNA pseudouridine synthase D (TruD) AA314_05780 PF04542 Sigma-70 region 2 AA314_05780 PF08281 Sigma-70, region 4 AA314_05785 PF01266 FAD dependent oxidoreductase AA314_05786 PF00106 short chain dehydrogenase AA314_05791 PF01212 Beta-eliminating lyase AA314_05794 PF00487 Fatty acid desaturase AA314_05795 PF01553 Acyltransferase AA314_05795 PF00501 AMP-binding enzyme AA314_05795 PF13193 AMP-binding enzyme C-terminal domain AA314_05797 PF03372 Endonuclease/Exonuclease/phosphatase family AA314_05798 PF00069 Protein kinase domain AA314_05800 PF00248 Aldo/keto reductase family AA314_05803 PF01204 Trehalase AA314_05805 PF01979 Amidohydrolase family AA314_05807 PF00561 alpha/beta hydrolase fold AA314_05808 PF00248 Aldo/keto reductase family AA314_05811 PF08448 PAS fold AA314_05811 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05811 PF13188 PAS domain AA314_05811 PF00512 His Kinase A (phospho-acceptor) domain AA314_05811 PF00072 Response regulator receiver domain AA314_05816 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_05816 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_05816 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_05817 PF12146 Serine aminopeptidase, S33 AA314_05821 PF07733 Bacterial DNA polymerase III alpha NTPase domain AA314_05821 PF02811 PHP domain AA314_05821 PF14579 Helix-hairpin-helix motif AA314_05821 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AA314_05826 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_05826 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_05826 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_05831 PF01145 SPFH domain / Band 7 family AA314_05835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_05835 PF03466 LysR substrate binding domain AA314_05836 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_05836 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_05836 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_05837 PF00106 short chain dehydrogenase AA314_05837 PF00561 alpha/beta hydrolase fold AA314_05840 PF01370 NAD dependent epimerase/dehydratase family AA314_05842 PF00535 Glycosyl transferase family 2 AA314_05849 PF02424 ApbE family AA314_05851 PF00154 recA bacterial DNA recombination protein AA314_05853 PF05362 Lon protease (S16) C-terminal proteolytic domain AA314_05853 PF00004 ATPase family associated with various cellular activities (AAA) AA314_05853 PF02190 ATP-dependent protease La (LON) substrate-binding domain AA314_05855 PF00550 Phosphopantetheine attachment site AA314_05855 PF13193 AMP-binding enzyme C-terminal domain AA314_05855 PF00668 Condensation domain AA314_05855 PF00501 AMP-binding enzyme AA314_05856 PF00501 AMP-binding enzyme AA314_05856 PF00550 Phosphopantetheine attachment site AA314_05856 PF13193 AMP-binding enzyme C-terminal domain AA314_05856 PF00668 Condensation domain AA314_05856 PF00550 Phosphopantetheine attachment site AA314_05856 PF00501 AMP-binding enzyme AA314_05856 PF13193 AMP-binding enzyme C-terminal domain AA314_05856 PF00668 Condensation domain AA314_05857 PF00668 Condensation domain AA314_05857 PF00550 Phosphopantetheine attachment site AA314_05857 PF13193 AMP-binding enzyme C-terminal domain AA314_05857 PF00501 AMP-binding enzyme AA314_05859 PF04389 Peptidase family M28 AA314_05860 PF00248 Aldo/keto reductase family AA314_05866 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AA314_05868 PF03793 PASTA domain AA314_05868 PF00069 Protein kinase domain AA314_05870 PF02954 Bacterial regulatory protein, Fis family AA314_05870 PF00072 Response regulator receiver domain AA314_05870 PF00158 Sigma-54 interaction domain AA314_05874 PF01594 AI-2E family transporter AA314_05876 PF01118 Semialdehyde dehydrogenase, NAD binding domain AA314_05876 PF02774 Semialdehyde dehydrogenase, dimerisation domain AA314_05877 PF01960 ArgJ family AA314_05878 PF02863 Arginine repressor, C-terminal domain AA314_05878 PF01316 Arginine repressor, DNA binding domain AA314_05879 PF00206 Lyase AA314_05879 PF14698 Argininosuccinate lyase C-terminal AA314_05880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AA314_05880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AA314_05883 PF00512 His Kinase A (phospho-acceptor) domain AA314_05883 PF08448 PAS fold AA314_05883 PF13188 PAS domain AA314_05883 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05883 PF00072 Response regulator receiver domain AA314_05884 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AA314_05885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AA314_05885 PF02142 MGS-like domain AA314_05885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA314_05890 PF01467 Cytidylyltransferase-like AA314_05895 PF16916 Dimerisation domain of Zinc Transporter AA314_05895 PF01545 Cation efflux family AA314_05896 PF02954 Bacterial regulatory protein, Fis family AA314_05896 PF00158 Sigma-54 interaction domain AA314_05896 PF01590 GAF domain AA314_05901 PF01709 Transcriptional regulator AA314_05906 PF00034 Cytochrome c AA314_05906 PF03150 Di-haem cytochrome c peroxidase AA314_05907 PF02311 AraC-like ligand binding domain AA314_05907 PF12833 Helix-turn-helix domain AA314_05908 PF12802 MarR family AA314_05911 PF00873 AcrB/AcrD/AcrF family AA314_05912 PF00873 AcrB/AcrD/AcrF family AA314_05913 PF07690 Major Facilitator Superfamily AA314_05916 PF17954 Quercetinase C-terminal cupin domain AA314_05916 PF02678 Pirin AA314_05917 PF01619 Proline dehydrogenase AA314_05929 PF00297 Ribosomal protein L3 AA314_05936 PF10145 Phage-related minor tail protein AA314_05936 PF01464 Transglycosylase SLT domain AA314_05936 PF01551 Peptidase family M23 AA314_05940 PF17863 AAA lid domain AA314_05940 PF07726 ATPase family associated with various cellular activities (AAA) AA314_05943 PF00140 Sigma-70 factor, region 1.2 AA314_05943 PF04545 Sigma-70, region 4 AA314_05943 PF04542 Sigma-70 region 2 AA314_05944 PF03169 OPT oligopeptide transporter protein AA314_05951 PF01966 HD domain AA314_05951 PF11871 Domain of unknown function (DUF3391) AA314_05952 PF01593 Flavin containing amine oxidoreductase AA314_05953 PF00893 Small Multidrug Resistance protein AA314_05954 PF01479 S4 domain AA314_05954 PF00849 RNA pseudouridylate synthase AA314_05957 PF10609 NUBPL iron-transfer P-loop NTPase AA314_05960 PF03841 L-seryl-tRNA selenium transferase AA314_05960 PF12390 Selenocysteine synthase N terminal AA314_05961 PF01464 Transglycosylase SLT domain AA314_05962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_05962 PF00512 His Kinase A (phospho-acceptor) domain AA314_05965 PF00795 Carbon-nitrogen hydrolase AA314_05968 PF13360 PQQ-like domain AA314_05968 PF00069 Protein kinase domain AA314_05972 PF12848 ABC transporter AA314_05972 PF00005 ABC transporter AA314_05973 PF00069 Protein kinase domain AA314_05976 PF02224 Cytidylate kinase AA314_05977 PF00155 Aminotransferase class I and II AA314_05978 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AA314_05982 PF02374 Anion-transporting ATPase AA314_05983 PF02954 Bacterial regulatory protein, Fis family AA314_05983 PF00072 Response regulator receiver domain AA314_05983 PF00158 Sigma-54 interaction domain AA314_05987 PF06798 PrkA serine protein kinase C-terminal domain AA314_05987 PF08298 PrkA AAA domain AA314_05990 PF00012 Hsp70 protein AA314_05992 PF06689 ClpX C4-type zinc finger AA314_05992 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_05992 PF07724 AAA domain (Cdc48 subfamily) AA314_05995 PF01416 tRNA pseudouridine synthase AA314_05997 PF02540 NAD synthase AA314_06000 PF02597 ThiS family AA314_06001 PF01206 Sulfurtransferase TusA AA314_06002 PF00899 ThiF family AA314_06004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06004 PF07730 Histidine kinase AA314_06004 PF05384 Sensor protein DegS AA314_06005 PF00072 Response regulator receiver domain AA314_06005 PF00196 Bacterial regulatory proteins, luxR family AA314_06009 PF03576 Peptidase family S58 AA314_06010 PF00440 Bacterial regulatory proteins, tetR family AA314_06013 PF03055 Retinal pigment epithelial membrane protein AA314_06016 PF07478 D-ala D-ala ligase C-terminus AA314_06016 PF01820 D-ala D-ala ligase N-terminus AA314_06019 PF00490 Delta-aminolevulinic acid dehydratase AA314_06021 PF00005 ABC transporter AA314_06024 PF05175 Methyltransferase small domain AA314_06028 PF01739 CheR methyltransferase, SAM binding domain AA314_06029 PF01339 CheB methylesterase AA314_06030 PF01627 Hpt domain AA314_06030 PF01584 CheW-like domain AA314_06030 PF00072 Response regulator receiver domain AA314_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06031 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_06033 PF01584 CheW-like domain AA314_06034 PF00486 Transcriptional regulatory protein, C terminal AA314_06034 PF00072 Response regulator receiver domain AA314_06037 PF06463 Molybdenum Cofactor Synthesis C AA314_06037 PF04055 Radical SAM superfamily AA314_06038 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AA314_06038 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AA314_06039 PF04542 Sigma-70 region 2 AA314_06039 PF08281 Sigma-70, region 4 AA314_06043 PF00069 Protein kinase domain AA314_06043 PF08308 PEGA domain AA314_06047 PF03309 Type III pantothenate kinase AA314_06048 PF08279 HTH domain AA314_06048 PF03099 Biotin/lipoate A/B protein ligase family AA314_06048 PF02237 Biotin protein ligase C terminal domain AA314_06049 PF03447 Homoserine dehydrogenase, NAD binding domain AA314_06049 PF01842 ACT domain AA314_06049 PF00742 Homoserine dehydrogenase AA314_06055 PF03060 Nitronate monooxygenase AA314_06057 PF02463 RecF/RecN/SMC N terminal domain AA314_06059 PF00561 alpha/beta hydrolase fold AA314_06060 PF00485 Phosphoribulokinase / Uridine kinase family AA314_06062 PF05114 Protein of unknown function (DUF692) AA314_06065 PF13419 Haloacid dehalogenase-like hydrolase AA314_06066 PF04542 Sigma-70 region 2 AA314_06066 PF08281 Sigma-70, region 4 AA314_06067 PF04143 Sulphur transport AA314_06069 PF00512 His Kinase A (phospho-acceptor) domain AA314_06069 PF00672 HAMP domain AA314_06069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06071 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AA314_06071 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AA314_06072 PF00990 Diguanylate cyclase, GGDEF domain AA314_06072 PF08447 PAS fold AA314_06072 PF08448 PAS fold AA314_06072 PF13426 PAS domain AA314_06072 PF05231 MASE1 AA314_06072 PF00563 EAL domain AA314_06074 PF00107 Zinc-binding dehydrogenase AA314_06074 PF08240 Alcohol dehydrogenase GroES-like domain AA314_06079 PF03641 Possible lysine decarboxylase AA314_06085 PF17862 AAA+ lid domain AA314_06085 PF00004 ATPase family associated with various cellular activities (AAA) AA314_06085 PF06480 FtsH Extracellular AA314_06085 PF01434 Peptidase family M41 AA314_06086 PF02142 MGS-like domain AA314_06087 PF06974 Protein of unknown function (DUF1298) AA314_06087 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AA314_06094 PF00196 Bacterial regulatory proteins, luxR family AA314_06096 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06096 PF00672 HAMP domain AA314_06105 PF00437 Type II/IV secretion system protein AA314_06105 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AA314_06107 PF03466 LysR substrate binding domain AA314_06107 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06113 PF05698 Bacterial trigger factor protein (TF) C-terminus AA314_06113 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_06113 PF05697 Bacterial trigger factor protein (TF) AA314_06116 PF00207 Alpha-2-macroglobulin family AA314_06116 PF01835 MG2 domain AA314_06116 PF07703 Alpha-2-macroglobulin bait region domain AA314_06122 PF00999 Sodium/hydrogen exchanger family AA314_06122 PF02254 TrkA-N domain AA314_06123 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06123 PF03466 LysR substrate binding domain AA314_06129 PF00912 Transglycosylase AA314_06132 PF00067 Cytochrome P450 AA314_06133 PF00437 Type II/IV secretion system protein AA314_06136 PF05698 Bacterial trigger factor protein (TF) C-terminus AA314_06136 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_06136 PF05697 Bacterial trigger factor protein (TF) AA314_06137 PF01625 Peptide methionine sulfoxide reductase AA314_06138 PF02687 FtsX-like permease family AA314_06138 PF00005 ABC transporter AA314_06138 PF12704 MacB-like periplasmic core domain AA314_06139 PF02687 FtsX-like permease family AA314_06139 PF12704 MacB-like periplasmic core domain AA314_06139 PF00005 ABC transporter AA314_06140 PF12704 MacB-like periplasmic core domain AA314_06140 PF02687 FtsX-like permease family AA314_06140 PF00005 ABC transporter AA314_06144 PF17871 AAA lid domain AA314_06144 PF00004 ATPase family associated with various cellular activities (AAA) AA314_06144 PF02861 Clp amino terminal domain, pathogenicity island component AA314_06144 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_06144 PF07724 AAA domain (Cdc48 subfamily) AA314_06151 PF02743 Cache domain AA314_06151 PF00512 His Kinase A (phospho-acceptor) domain AA314_06151 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06155 PF00512 His Kinase A (phospho-acceptor) domain AA314_06155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06155 PF13188 PAS domain AA314_06155 PF00072 Response regulator receiver domain AA314_06155 PF08448 PAS fold AA314_06162 PF02872 5'-nucleotidase, C-terminal domain AA314_06162 PF00149 Calcineurin-like phosphoesterase AA314_06166 PF18415 Histidine kinase receptor ArcB trans-membrane domain AA314_06166 PF00512 His Kinase A (phospho-acceptor) domain AA314_06166 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06167 PF00069 Protein kinase domain AA314_06169 PF18354 CarS bacterial SH3 domain AA314_06171 PF04545 Sigma-70, region 4 AA314_06171 PF04542 Sigma-70 region 2 AA314_06172 PF00512 His Kinase A (phospho-acceptor) domain AA314_06172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06172 PF00072 Response regulator receiver domain AA314_06172 PF13426 PAS domain AA314_06172 PF08448 PAS fold AA314_06173 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06173 PF00512 His Kinase A (phospho-acceptor) domain AA314_06174 PF00072 Response regulator receiver domain AA314_06174 PF00486 Transcriptional regulatory protein, C terminal AA314_06175 PF00689 Cation transporting ATPase, C-terminus AA314_06175 PF00690 Cation transporter/ATPase, N-terminus AA314_06179 PF02954 Bacterial regulatory protein, Fis family AA314_06179 PF00158 Sigma-54 interaction domain AA314_06179 PF01590 GAF domain AA314_06181 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_06181 PF00069 Protein kinase domain AA314_06186 PF01467 Cytidylyltransferase-like AA314_06188 PF07075 Protein of unknown function (DUF1343) AA314_06189 PF00069 Protein kinase domain AA314_06189 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_06191 PF00488 MutS domain V AA314_06191 PF01713 Smr domain AA314_06193 PF00069 Protein kinase domain AA314_06193 PF03793 PASTA domain AA314_06196 PF17876 Cold shock domain AA314_06196 PF00575 S1 RNA binding domain AA314_06196 PF00773 RNB domain AA314_06196 PF08206 Ribonuclease B OB domain AA314_06198 PF03454 MoeA C-terminal region (domain IV) AA314_06198 PF03453 MoeA N-terminal region (domain I and II) AA314_06198 PF00994 Probable molybdopterin binding domain AA314_06199 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AA314_06199 PF00925 GTP cyclohydrolase II AA314_06201 PF00293 NUDIX domain AA314_06201 PF03099 Biotin/lipoate A/B protein ligase family AA314_06203 PF02817 e3 binding domain AA314_06203 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AA314_06203 PF00364 Biotin-requiring enzyme AA314_06204 PF04055 Radical SAM superfamily AA314_06204 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AA314_06206 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_06206 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA314_06210 PF00575 S1 RNA binding domain AA314_06210 PF00773 RNB domain AA314_06210 PF08206 Ribonuclease B OB domain AA314_06210 PF17876 Cold shock domain AA314_06211 PF01551 Peptidase family M23 AA314_06211 PF04225 Opacity-associated protein A LysM-like domain AA314_06217 PF01502 Phosphoribosyl-AMP cyclohydrolase AA314_06218 PF00459 Inositol monophosphatase family AA314_06219 PF00977 Histidine biosynthesis protein AA314_06220 PF00475 Imidazoleglycerol-phosphate dehydratase AA314_06221 PF00977 Histidine biosynthesis protein AA314_06222 PF00117 Glutamine amidotransferase class-I AA314_06223 PF00155 Aminotransferase class I and II AA314_06224 PF00815 Histidinol dehydrogenase AA314_06225 PF08029 HisG, C-terminal domain AA314_06225 PF01634 ATP phosphoribosyltransferase AA314_06226 PF01266 FAD dependent oxidoreductase AA314_06226 PF05690 Thiazole biosynthesis protein ThiG AA314_06227 PF00072 Response regulator receiver domain AA314_06228 PF06463 Molybdenum Cofactor Synthesis C AA314_06228 PF04055 Radical SAM superfamily AA314_06230 PF01964 Radical SAM ThiC family AA314_06230 PF13667 ThiC-associated domain AA314_06232 PF00478 IMP dehydrogenase / GMP reductase domain AA314_06232 PF00571 CBS domain AA314_06236 PF00072 Response regulator receiver domain AA314_06236 PF00158 Sigma-54 interaction domain AA314_06236 PF02954 Bacterial regulatory protein, Fis family AA314_06237 PF00512 His Kinase A (phospho-acceptor) domain AA314_06237 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06238 PF00072 Response regulator receiver domain AA314_06239 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06240 PF00691 OmpA family AA314_06242 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA314_06243 PF04209 homogentisate 1,2-dioxygenase AA314_06247 PF00743 Flavin-binding monooxygenase-like AA314_06251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06251 PF03466 LysR substrate binding domain AA314_06252 PF00857 Isochorismatase family AA314_06253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06253 PF03466 LysR substrate binding domain AA314_06254 PF03466 LysR substrate binding domain AA314_06254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06258 PF12833 Helix-turn-helix domain AA314_06259 PF01494 FAD binding domain AA314_06262 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AA314_06262 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AA314_06265 PF13180 PDZ domain AA314_06265 PF17820 PDZ domain AA314_06268 PF06480 FtsH Extracellular AA314_06268 PF01434 Peptidase family M41 AA314_06268 PF00004 ATPase family associated with various cellular activities (AAA) AA314_06268 PF17862 AAA+ lid domain AA314_06270 PF00293 NUDIX domain AA314_06271 PF00069 Protein kinase domain AA314_06271 PF03793 PASTA domain AA314_06273 PF03918 Cytochrome C biogenesis protein AA314_06277 PF07730 Histidine kinase AA314_06277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06277 PF13492 GAF domain AA314_06277 PF13185 GAF domain AA314_06280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AA314_06283 PF01933 Uncharacterised protein family UPF0052 AA314_06284 PF02397 Bacterial sugar transferase AA314_06285 PF13614 AAA domain AA314_06290 PF00158 Sigma-54 interaction domain AA314_06290 PF02954 Bacterial regulatory protein, Fis family AA314_06290 PF13185 GAF domain AA314_06291 PF00877 NlpC/P60 family AA314_06298 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA314_06298 PF00128 Alpha amylase, catalytic domain AA314_06298 PF11941 Domain of unknown function (DUF3459) AA314_06301 PF00561 alpha/beta hydrolase fold AA314_06302 PF07714 Protein tyrosine kinase AA314_06303 PF00069 Protein kinase domain AA314_06307 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06307 PF00072 Response regulator receiver domain AA314_06307 PF13188 PAS domain AA314_06307 PF08448 PAS fold AA314_06307 PF00512 His Kinase A (phospho-acceptor) domain AA314_06309 PF04545 Sigma-70, region 4 AA314_06309 PF04542 Sigma-70 region 2 AA314_06309 PF00140 Sigma-70 factor, region 1.2 AA314_06309 PF04539 Sigma-70 region 3 AA314_06311 PF00313 'Cold-shock' DNA-binding domain AA314_06312 PF01425 Amidase AA314_06320 PF04542 Sigma-70 region 2 AA314_06320 PF08281 Sigma-70, region 4 AA314_06325 PF01370 NAD dependent epimerase/dehydratase family AA314_06326 PF00512 His Kinase A (phospho-acceptor) domain AA314_06326 PF08448 PAS fold AA314_06326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06326 PF00072 Response regulator receiver domain AA314_06326 PF13188 PAS domain AA314_06327 PF00270 DEAD/DEAH box helicase AA314_06327 PF00271 Helicase conserved C-terminal domain AA314_06327 PF03880 DbpA RNA binding domain AA314_06328 PF00158 Sigma-54 interaction domain AA314_06328 PF00072 Response regulator receiver domain AA314_06328 PF02954 Bacterial regulatory protein, Fis family AA314_06329 PF07694 5TMR of 5TMR-LYT AA314_06329 PF00990 Diguanylate cyclase, GGDEF domain AA314_06333 PF00849 RNA pseudouridylate synthase AA314_06336 PF00905 Penicillin binding protein transpeptidase domain AA314_06338 PF00005 ABC transporter AA314_06339 PF01206 Sulfurtransferase TusA AA314_06340 PF06965 Na+/H+ antiporter 1 AA314_06340 PF13462 Thioredoxin AA314_06341 PF01042 Endoribonuclease L-PSP AA314_06342 PF04607 Region found in RelA / SpoT proteins AA314_06342 PF02824 TGS domain AA314_06342 PF13291 ACT domain AA314_06345 PF00069 Protein kinase domain AA314_06348 PF01258 Prokaryotic dksA/traR C4-type zinc finger AA314_06351 PF00465 Iron-containing alcohol dehydrogenase AA314_06356 PF00012 Hsp70 protein AA314_06359 PF04359 Protein of unknown function (DUF493) AA314_06360 PF02562 PhoH-like protein AA314_06360 PF13638 PIN domain AA314_06361 PF03449 Transcription elongation factor, N-terminal AA314_06361 PF01272 Transcription elongation factor, GreA/GreB, C-term AA314_06364 PF04055 Radical SAM superfamily AA314_06364 PF13186 Iron-sulfur cluster-binding domain AA314_06370 PF00135 Carboxylesterase family AA314_06375 PF03733 Inner membrane component domain AA314_06378 PF14521 Lysine-specific metallo-endopeptidase AA314_06381 PF02687 FtsX-like permease family AA314_06381 PF12704 MacB-like periplasmic core domain AA314_06381 PF00005 ABC transporter AA314_06382 PF01522 Polysaccharide deacetylase AA314_06382 PF00457 Glycosyl hydrolases family 11 AA314_06383 PF00155 Aminotransferase class I and II AA314_06385 PF00512 His Kinase A (phospho-acceptor) domain AA314_06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06385 PF00989 PAS fold AA314_06386 PF00512 His Kinase A (phospho-acceptor) domain AA314_06386 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06387 PF13191 AAA ATPase domain AA314_06387 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_06392 PF00360 Phytochrome region AA314_06392 PF08446 PAS fold AA314_06392 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06392 PF01590 GAF domain AA314_06392 PF00512 His Kinase A (phospho-acceptor) domain AA314_06410 PF01757 Acyltransferase family AA314_06411 PF05661 Protein of unknown function (DUF808) AA314_06412 PF00266 Aminotransferase class-V AA314_06413 PF00593 TonB dependent receptor AA314_06415 PF00067 Cytochrome P450 AA314_06418 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06418 PF03466 LysR substrate binding domain AA314_06427 PF12146 Serine aminopeptidase, S33 AA314_06431 PF00378 Enoyl-CoA hydratase/isomerase AA314_06437 PF00989 PAS fold AA314_06437 PF16736 Single Cache-like AA314_06437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06437 PF00512 His Kinase A (phospho-acceptor) domain AA314_06442 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06442 PF03466 LysR substrate binding domain AA314_06443 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AA314_06444 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AA314_06444 PF04616 Glycosyl hydrolases family 43 AA314_06453 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AA314_06453 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AA314_06454 PF00175 Oxidoreductase NAD-binding domain AA314_06454 PF00258 Flavodoxin AA314_06454 PF00667 FAD binding domain AA314_06455 PF00009 Elongation factor Tu GTP binding domain AA314_06456 PF01507 Phosphoadenosine phosphosulfate reductase family AA314_06457 PF10414 Sirohaem synthase dimerisation region AA314_06457 PF14824 Sirohaem biosynthesis protein central AA314_06457 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA314_06458 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA314_06458 PF14824 Sirohaem biosynthesis protein central AA314_06458 PF10414 Sirohaem synthase dimerisation region AA314_06460 PF01507 Phosphoadenosine phosphosulfate reductase family AA314_06462 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_06462 PF13191 AAA ATPase domain AA314_06463 PF03631 Virulence factor BrkB AA314_06466 PF00027 Cyclic nucleotide-binding domain AA314_06466 PF07885 Ion channel AA314_06467 PF01321 Creatinase/Prolidase N-terminal domain AA314_06467 PF00557 Metallopeptidase family M24 AA314_06469 PF07995 Glucose / Sorbosone dehydrogenase AA314_06472 PF00512 His Kinase A (phospho-acceptor) domain AA314_06472 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06473 PF00072 Response regulator receiver domain AA314_06473 PF00486 Transcriptional regulatory protein, C terminal AA314_06479 PF02743 Cache domain AA314_06479 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_06479 PF00672 HAMP domain AA314_06484 PF02630 SCO1/SenC AA314_06494 PF00578 AhpC/TSA family AA314_06500 PF00664 ABC transporter transmembrane region AA314_06500 PF00005 ABC transporter AA314_06500 PF03412 Peptidase C39 family AA314_06502 PF00581 Rhodanese-like domain AA314_06504 PF01209 ubiE/COQ5 methyltransferase family AA314_06507 PF13575 Domain of unknown function (DUF4135) AA314_06507 PF05147 Lanthionine synthetase C-like protein AA314_06509 PF00196 Bacterial regulatory proteins, luxR family AA314_06509 PF00072 Response regulator receiver domain AA314_06510 PF00011 Hsp20/alpha crystallin family AA314_06522 PF00684 DnaJ central domain AA314_06522 PF01556 DnaJ C terminal domain AA314_06522 PF00226 DnaJ domain AA314_06523 PF03807 NADP oxidoreductase coenzyme F420-dependent AA314_06523 PF14748 Pyrroline-5-carboxylate reductase dimerisation AA314_06525 PF02594 Uncharacterised ACR, YggU family COG1872 AA314_06530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AA314_06530 PF01367 5'-3' exonuclease, C-terminal SAM fold AA314_06530 PF00476 DNA polymerase family A AA314_06530 PF01612 3'-5' exonuclease AA314_06532 PF00437 Type II/IV secretion system protein AA314_06533 PF03958 Bacterial type II/III secretion system short domain AA314_06533 PF00263 Bacterial type II and III secretion system protein AA314_06535 PF16697 Inner membrane component of T3SS, cytoplasmic domain AA314_06538 PF02092 Glycyl-tRNA synthetase beta subunit AA314_06538 PF05746 DALR anticodon binding domain AA314_06539 PF02091 Glycyl-tRNA synthetase alpha subunit AA314_06540 PF08308 PEGA domain AA314_06540 PF00069 Protein kinase domain AA314_06541 PF00294 pfkB family carbohydrate kinase AA314_06542 PF11967 Recombination protein O N terminal AA314_06542 PF02565 Recombination protein O C terminal AA314_06549 PF04998 RNA polymerase Rpb1, domain 5 AA314_06549 PF05000 RNA polymerase Rpb1, domain 4 AA314_06549 PF04983 RNA polymerase Rpb1, domain 3 AA314_06549 PF00623 RNA polymerase Rpb1, domain 2 AA314_06549 PF04997 RNA polymerase Rpb1, domain 1 AA314_06550 PF04560 RNA polymerase Rpb2, domain 7 AA314_06550 PF10385 RNA polymerase beta subunit external 1 domain AA314_06550 PF04565 RNA polymerase Rpb2, domain 3 AA314_06550 PF00562 RNA polymerase Rpb2, domain 6 AA314_06550 PF04561 RNA polymerase Rpb2, domain 2 AA314_06550 PF04563 RNA polymerase beta subunit AA314_06551 PF00542 Ribosomal protein L7/L12 C-terminal domain AA314_06551 PF16320 Ribosomal protein L7/L12 dimerisation domain AA314_06552 PF00466 Ribosomal protein L10 AA314_06553 PF00687 Ribosomal protein L1p/L10e family AA314_06554 PF00298 Ribosomal protein L11, RNA binding domain AA314_06554 PF03946 Ribosomal protein L11, N-terminal domain AA314_06555 PF02357 Transcription termination factor nusG AA314_06555 PF00467 KOW motif AA314_06557 PF00471 Ribosomal protein L33 AA314_06558 PF00009 Elongation factor Tu GTP binding domain AA314_06558 PF03143 Elongation factor Tu C-terminal domain AA314_06558 PF03144 Elongation factor Tu domain 2 AA314_06559 PF08032 RNA 2'-O ribose methyltransferase substrate binding AA314_06559 PF00588 SpoU rRNA Methylase family AA314_06561 PF08443 RimK-like ATP-grasp domain AA314_06561 PF18030 RimK PreATP-grasp domain AA314_06567 PF08482 ATP-dependent helicase C-terminal AA314_06567 PF00271 Helicase conserved C-terminal domain AA314_06567 PF04408 Helicase associated domain (HA2) AA314_06567 PF00270 DEAD/DEAH box helicase AA314_06569 PF12832 MFS_1 like family AA314_06572 PF11953 Domain of unknown function (DUF3470) AA314_06572 PF00037 4Fe-4S binding domain AA314_06573 PF02774 Semialdehyde dehydrogenase, dimerisation domain AA314_06573 PF01118 Semialdehyde dehydrogenase, NAD binding domain AA314_06575 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_06575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_06575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_06576 PF04389 Peptidase family M28 AA314_06576 PF02225 PA domain AA314_06579 PF03466 LysR substrate binding domain AA314_06579 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06580 PF08240 Alcohol dehydrogenase GroES-like domain AA314_06580 PF00107 Zinc-binding dehydrogenase AA314_06583 PF02769 AIR synthase related protein, C-terminal domain AA314_06583 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AA314_06583 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AA314_06585 PF01568 Molydopterin dinucleotide binding domain AA314_06585 PF00384 Molybdopterin oxidoreductase AA314_06585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA314_06587 PF01209 ubiE/COQ5 methyltransferase family AA314_06589 PF08787 Alginate lyase AA314_06597 PF08486 Stage II sporulation protein AA314_06601 PF00067 Cytochrome P450 AA314_06602 PF00672 HAMP domain AA314_06602 PF00512 His Kinase A (phospho-acceptor) domain AA314_06602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06604 PF01799 [2Fe-2S] binding domain AA314_06604 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_06604 PF10518 TAT (twin-arginine translocation) pathway signal sequence AA314_06605 PF03450 CO dehydrogenase flavoprotein C-terminal domain AA314_06605 PF00941 FAD binding domain in molybdopterin dehydrogenase AA314_06606 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AA314_06606 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AA314_06614 PF02347 Glycine cleavage system P-protein AA314_06616 PF01597 Glycine cleavage H-protein AA314_06617 PF08669 Glycine cleavage T-protein C-terminal barrel domain AA314_06617 PF01571 Aminomethyltransferase folate-binding domain AA314_06618 PF02219 Methylenetetrahydrofolate reductase AA314_06620 PF00561 alpha/beta hydrolase fold AA314_06622 PF07715 TonB-dependent Receptor Plug Domain AA314_06622 PF00593 TonB dependent receptor AA314_06624 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AA314_06624 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AA314_06625 PF05099 Tellurite resistance protein TerB AA314_06625 PF00226 DnaJ domain AA314_06626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06626 PF00989 PAS fold AA314_06626 PF00512 His Kinase A (phospho-acceptor) domain AA314_06626 PF18698 Histidine kinase sensor domain AA314_06626 PF00672 HAMP domain AA314_06628 PF01053 Cys/Met metabolism PLP-dependent enzyme AA314_06629 PF01053 Cys/Met metabolism PLP-dependent enzyme AA314_06631 PF01842 ACT domain AA314_06631 PF00696 Amino acid kinase family AA314_06631 PF00742 Homoserine dehydrogenase AA314_06631 PF13840 ACT domain AA314_06631 PF03447 Homoserine dehydrogenase, NAD binding domain AA314_06637 PF01713 Smr domain AA314_06639 PF01180 Dihydroorotate dehydrogenase AA314_06640 PF00067 Cytochrome P450 AA314_06641 PF12833 Helix-turn-helix domain AA314_06641 PF02311 AraC-like ligand binding domain AA314_06644 PF13439 Glycosyltransferase Family 4 AA314_06644 PF00534 Glycosyl transferases group 1 AA314_06647 PF01926 50S ribosome-binding GTPase AA314_06650 PF01121 Dephospho-CoA kinase AA314_06654 PF00202 Aminotransferase class-III AA314_06655 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_06655 PF07724 AAA domain (Cdc48 subfamily) AA314_06656 PF00227 Proteasome subunit AA314_06657 PF04754 Putative transposase, YhgA-like AA314_06658 PF00589 Phage integrase family AA314_06658 PF02899 Phage integrase, N-terminal SAM-like domain AA314_06660 PF01134 Glucose inhibited division protein A AA314_06665 PF01131 DNA topoisomerase AA314_06665 PF01751 Toprim domain AA314_06665 PF01396 Topoisomerase DNA binding C4 zinc finger AA314_06670 PF00990 Diguanylate cyclase, GGDEF domain AA314_06671 PF17820 PDZ domain AA314_06671 PF13180 PDZ domain AA314_06672 PF09210 Domain of unknown function (DUF1957) AA314_06672 PF03065 Glycosyl hydrolase family 57 AA314_06674 PF13439 Glycosyltransferase Family 4 AA314_06675 PF00072 Response regulator receiver domain AA314_06677 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_06677 PF17871 AAA lid domain AA314_06677 PF07724 AAA domain (Cdc48 subfamily) AA314_06677 PF00004 ATPase family associated with various cellular activities (AAA) AA314_06678 PF08335 GlnD PII-uridylyltransferase AA314_06678 PF03710 Glutamate-ammonia ligase adenylyltransferase AA314_06680 PF12002 MgsA AAA+ ATPase C terminal AA314_06680 PF16193 AAA C-terminal domain AA314_06680 PF00004 ATPase family associated with various cellular activities (AAA) AA314_06682 PF01261 Xylose isomerase-like TIM barrel AA314_06683 PF02833 DHHA2 domain AA314_06683 PF01368 DHH family AA314_06686 PF00069 Protein kinase domain AA314_06689 PF13277 YmdB-like protein AA314_06690 PF00579 tRNA synthetases class I (W and Y) AA314_06690 PF01479 S4 domain AA314_06692 PF02586 SOS response associated peptidase (SRAP) AA314_06695 PF01728 FtsJ-like methyltransferase AA314_06698 PF03793 PASTA domain AA314_06698 PF00069 Protein kinase domain AA314_06699 PF00512 His Kinase A (phospho-acceptor) domain AA314_06699 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06699 PF00672 HAMP domain AA314_06700 PF00672 HAMP domain AA314_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06700 PF18698 Histidine kinase sensor domain AA314_06700 PF00512 His Kinase A (phospho-acceptor) domain AA314_06700 PF00989 PAS fold AA314_06703 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_06703 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_06703 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_06707 PF13188 PAS domain AA314_06707 PF08448 PAS fold AA314_06707 PF00512 His Kinase A (phospho-acceptor) domain AA314_06707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06707 PF00072 Response regulator receiver domain AA314_06710 PF08659 KR domain AA314_06710 PF16197 Ketoacyl-synthetase C-terminal extension AA314_06710 PF00698 Acyl transferase domain AA314_06710 PF08240 Alcohol dehydrogenase GroES-like domain AA314_06710 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_06710 PF16197 Ketoacyl-synthetase C-terminal extension AA314_06710 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_06710 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_06710 PF00550 Phosphopantetheine attachment site AA314_06710 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_06710 PF08240 Alcohol dehydrogenase GroES-like domain AA314_06710 PF00698 Acyl transferase domain AA314_06710 PF08659 KR domain AA314_06710 PF14765 Polyketide synthase dehydratase AA314_06710 PF14765 Polyketide synthase dehydratase AA314_06710 PF00550 Phosphopantetheine attachment site AA314_06711 PF08659 KR domain AA314_06711 PF00550 Phosphopantetheine attachment site AA314_06711 PF00975 Thioesterase domain AA314_06711 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_06711 PF16197 Ketoacyl-synthetase C-terminal extension AA314_06711 PF08990 Erythronolide synthase docking AA314_06711 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_06711 PF00698 Acyl transferase domain AA314_06712 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_06712 PF08240 Alcohol dehydrogenase GroES-like domain AA314_06712 PF00698 Acyl transferase domain AA314_06712 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_06712 PF08659 KR domain AA314_06712 PF00550 Phosphopantetheine attachment site AA314_06712 PF14765 Polyketide synthase dehydratase AA314_06712 PF16197 Ketoacyl-synthetase C-terminal extension AA314_06714 PF02515 CoA-transferase family III AA314_06716 PF00072 Response regulator receiver domain AA314_06717 PF02416 mttA/Hcf106 family AA314_06718 PF00501 AMP-binding enzyme AA314_06719 PF04545 Sigma-70, region 4 AA314_06719 PF04539 Sigma-70 region 3 AA314_06719 PF04542 Sigma-70 region 2 AA314_06719 PF00140 Sigma-70 factor, region 1.2 AA314_06720 PF02913 FAD linked oxidases, C-terminal domain AA314_06720 PF01565 FAD binding domain AA314_06721 PF01227 GTP cyclohydrolase I AA314_06727 PF00005 ABC transporter AA314_06735 PF00400 WD domain, G-beta repeat AA314_06735 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_06736 PF00400 WD domain, G-beta repeat AA314_06736 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_06738 PF00400 WD domain, G-beta repeat AA314_06739 PF00857 Isochorismatase family AA314_06740 PF00571 CBS domain AA314_06748 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AA314_06748 PF00205 Thiamine pyrophosphate enzyme, central domain AA314_06748 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA314_06750 PF01027 Inhibitor of apoptosis-promoting Bax1 AA314_06754 PF02867 Ribonucleotide reductase, barrel domain AA314_06754 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AA314_06758 PF02397 Bacterial sugar transferase AA314_06759 PF00534 Glycosyl transferases group 1 AA314_06759 PF13439 Glycosyltransferase Family 4 AA314_06760 PF13439 Glycosyltransferase Family 4 AA314_06760 PF00534 Glycosyl transferases group 1 AA314_06761 PF08713 DNA alkylation repair enzyme AA314_06762 PF12826 Helix-hairpin-helix motif AA314_06762 PF01541 GIY-YIG catalytic domain AA314_06762 PF02151 UvrB/uvrC motif AA314_06762 PF08459 UvrC Helix-hairpin-helix N-terminal AA314_06763 PF00072 Response regulator receiver domain AA314_06763 PF00486 Transcriptional regulatory protein, C terminal AA314_06764 PF01381 Helix-turn-helix AA314_06767 PF00069 Protein kinase domain AA314_06767 PF03793 PASTA domain AA314_06770 PF03739 Lipopolysaccharide export system permease LptF/LptG AA314_06771 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AA314_06771 PF02844 Phosphoribosylglycinamide synthetase, N domain AA314_06771 PF02843 Phosphoribosylglycinamide synthetase, C domain AA314_06773 PF01808 AICARFT/IMPCHase bienzyme AA314_06773 PF02142 MGS-like domain AA314_06774 PF03979 Sigma-70 factor, region 1.1 AA314_06774 PF00140 Sigma-70 factor, region 1.2 AA314_06774 PF04542 Sigma-70 region 2 AA314_06774 PF04539 Sigma-70 region 3 AA314_06774 PF04545 Sigma-70, region 4 AA314_06776 PF08308 PEGA domain AA314_06776 PF00069 Protein kinase domain AA314_06777 PF00069 Protein kinase domain AA314_06785 PF08543 Phosphomethylpyrimidine kinase AA314_06787 PF00512 His Kinase A (phospho-acceptor) domain AA314_06787 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06790 PF00069 Protein kinase domain AA314_06791 PF00512 His Kinase A (phospho-acceptor) domain AA314_06791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06792 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06792 PF00512 His Kinase A (phospho-acceptor) domain AA314_06792 PF00989 PAS fold AA314_06793 PF02954 Bacterial regulatory protein, Fis family AA314_06793 PF00072 Response regulator receiver domain AA314_06793 PF00158 Sigma-54 interaction domain AA314_06794 PF12704 MacB-like periplasmic core domain AA314_06794 PF00005 ABC transporter AA314_06794 PF02687 FtsX-like permease family AA314_06795 PF02687 FtsX-like permease family AA314_06795 PF00005 ABC transporter AA314_06795 PF12704 MacB-like periplasmic core domain AA314_06796 PF00005 ABC transporter AA314_06798 PF12034 Domain of unknown function (DUF3520) AA314_06798 PF12450 von Willebrand factor AA314_06798 PF00092 von Willebrand factor type A domain AA314_06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_06800 PF00512 His Kinase A (phospho-acceptor) domain AA314_06801 PF00072 Response regulator receiver domain AA314_06801 PF00486 Transcriptional regulatory protein, C terminal AA314_06803 PF01494 FAD binding domain AA314_06805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_06805 PF00672 HAMP domain AA314_06806 PF17827 PrmC N-terminal domain AA314_06806 PF05175 Methyltransferase small domain AA314_06807 PF14743 DNA ligase OB-like domain AA314_06807 PF01068 ATP dependent DNA ligase domain AA314_06810 PF05922 Peptidase inhibitor I9 AA314_06810 PF00082 Subtilase family AA314_06814 PF00171 Aldehyde dehydrogenase family AA314_06815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA314_06815 PF00205 Thiamine pyrophosphate enzyme, central domain AA314_06815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AA314_06816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_06816 PF03466 LysR substrate binding domain AA314_06817 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AA314_06817 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AA314_06820 PF00672 HAMP domain AA314_06820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_06820 PF17200 Single Cache domain 2 AA314_06822 PF18337 RapA N-terminal Tudor like domain AA314_06822 PF00271 Helicase conserved C-terminal domain AA314_06822 PF18339 RapA N-terminal Tudor like domain 1 AA314_06822 PF00176 SNF2 family N-terminal domain AA314_06822 PF12137 RNA polymerase recycling family C-terminal AA314_06825 PF03840 Preprotein translocase SecG subunit AA314_06826 PF00121 Triosephosphate isomerase AA314_06827 PF00162 Phosphoglycerate kinase AA314_06828 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AA314_06828 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AA314_06830 PF01219 Prokaryotic diacylglycerol kinase AA314_06835 PF01852 START domain AA314_06836 PF01966 HD domain AA314_06838 PF01026 TatD related DNase AA314_06840 PF09334 tRNA synthetases class I (M) AA314_06840 PF01588 Putative tRNA binding domain AA314_06845 PF01053 Cys/Met metabolism PLP-dependent enzyme AA314_06846 PF01053 Cys/Met metabolism PLP-dependent enzyme AA314_06847 PF13426 PAS domain AA314_06847 PF07228 Stage II sporulation protein E (SpoIIE) AA314_06848 PF12697 Alpha/beta hydrolase family AA314_06849 PF01037 Lrp/AsnC ligand binding domain AA314_06851 PF12169 DNA polymerase III subunits gamma and tau domain III AA314_06855 PF00067 Cytochrome P450 AA314_06866 PF07690 Major Facilitator Superfamily AA314_06868 PF07969 Amidohydrolase family AA314_06875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA314_06875 PF00384 Molybdopterin oxidoreductase AA314_06875 PF01568 Molydopterin dinucleotide binding domain AA314_06882 PF00994 Probable molybdopterin binding domain AA314_06884 PF14716 Helix-hairpin-helix domain AA314_06884 PF14791 DNA polymerase beta thumb AA314_06884 PF02811 PHP domain AA314_06889 PF00012 Hsp70 protein AA314_06891 PF00226 DnaJ domain AA314_06891 PF00684 DnaJ central domain AA314_06891 PF01556 DnaJ C terminal domain AA314_06893 PF07724 AAA domain (Cdc48 subfamily) AA314_06893 PF06689 ClpX C4-type zinc finger AA314_06893 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_06894 PF17810 Arginine decarboxylase helical bundle domain AA314_06894 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AA314_06894 PF17944 Arginine decarboxylase C-terminal helical extension AA314_06903 PF10079 Bacillithiol biosynthesis BshC AA314_06904 PF13439 Glycosyltransferase Family 4 AA314_06904 PF00534 Glycosyl transferases group 1 AA314_06906 PF00149 Calcineurin-like phosphoesterase AA314_06906 PF10518 TAT (twin-arginine translocation) pathway signal sequence AA314_06915 PF01916 Deoxyhypusine synthase AA314_06917 PF02811 PHP domain AA314_06918 PF00067 Cytochrome P450 AA314_06922 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_06923 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AA314_06924 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AA314_06925 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_06926 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AA314_06927 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AA314_06928 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AA314_06928 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AA314_06928 PF00384 Molybdopterin oxidoreductase AA314_06929 PF00146 NADH dehydrogenase AA314_06930 PF00037 4Fe-4S binding domain AA314_06932 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_06942 PF08460 Bacterial SH3 domain AA314_06942 PF01551 Peptidase family M23 AA314_06943 PF05853 beta-keto acid cleavage enzyme AA314_06944 PF00378 Enoyl-CoA hydratase/isomerase AA314_06945 PF00440 Bacterial regulatory proteins, tetR family AA314_06945 PF08359 YsiA-like protein, C-terminal region AA314_06947 PF01381 Helix-turn-helix AA314_06950 PF02875 Mur ligase family, glutamate ligase domain AA314_06950 PF08245 Mur ligase middle domain AA314_06951 PF01039 Carboxyl transferase domain AA314_06951 PF17848 Acetyl-coA carboxylase zinc finger domain AA314_06953 PF13545 Crp-like helix-turn-helix domain AA314_06953 PF00027 Cyclic nucleotide-binding domain AA314_06954 PF00586 AIR synthase related protein, N-terminal domain AA314_06954 PF02769 AIR synthase related protein, C-terminal domain AA314_06955 PF00551 Formyl transferase AA314_06956 PF04463 Protein of unknown function (DUF523) AA314_06957 PF04377 Arginine-tRNA-protein transferase, C terminus AA314_06957 PF04376 Arginine-tRNA-protein transferase, N terminus AA314_06958 PF01494 FAD binding domain AA314_06960 PF17932 Tetracyclin repressor-like, C-terminal domain AA314_06960 PF00440 Bacterial regulatory proteins, tetR family AA314_06963 PF00830 Ribosomal L28 family AA314_06964 PF13580 SIS domain AA314_06967 PF00043 Glutathione S-transferase, C-terminal domain AA314_06967 PF02798 Glutathione S-transferase, N-terminal domain AA314_06970 PF05726 Pirin C-terminal cupin domain AA314_06970 PF02678 Pirin AA314_06971 PF01047 MarR family AA314_06974 PF03702 Anhydro-N-acetylmuramic acid kinase AA314_06975 PF03702 Anhydro-N-acetylmuramic acid kinase AA314_06976 PF00025 ADP-ribosylation factor family AA314_06977 PF01725 Ham1 family AA314_06986 PF00144 Beta-lactamase AA314_06987 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_06989 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_06989 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA314_06995 PF07690 Major Facilitator Superfamily AA314_06999 PF03315 Serine dehydratase beta chain AA314_06999 PF03313 Serine dehydratase alpha chain AA314_07003 PF00196 Bacterial regulatory proteins, luxR family AA314_07003 PF00072 Response regulator receiver domain AA314_07008 PF00873 AcrB/AcrD/AcrF family AA314_07009 PF13533 Biotin-lipoyl like AA314_07010 PF02321 Outer membrane efflux protein AA314_07011 PF03965 Penicillinase repressor AA314_07012 PF02417 Chromate transporter AA314_07015 PF03065 Glycosyl hydrolase family 57 AA314_07015 PF00041 Fibronectin type III domain AA314_07015 PF03423 Carbohydrate binding domain (family 25) AA314_07022 PF06441 Epoxide hydrolase N terminus AA314_07023 PF02378 Phosphotransferase system, EIIC AA314_07023 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AA314_07024 PF00294 pfkB family carbohydrate kinase AA314_07025 PF05524 PEP-utilising enzyme, N-terminal AA314_07025 PF00391 PEP-utilising enzyme, mobile domain AA314_07025 PF02896 PEP-utilising enzyme, TIM barrel domain AA314_07025 PF00381 PTS HPr component phosphorylation site AA314_07025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AA314_07026 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AA314_07026 PF00356 Bacterial regulatory proteins, lacI family AA314_07027 PF00248 Aldo/keto reductase family AA314_07028 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AA314_07028 PF00378 Enoyl-CoA hydratase/isomerase AA314_07028 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AA314_07029 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_07029 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_07029 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_07031 PF02110 Hydroxyethylthiazole kinase family AA314_07032 PF02581 Thiamine monophosphate synthase AA314_07034 PF00069 Protein kinase domain AA314_07034 PF03793 PASTA domain AA314_07037 PF13407 Periplasmic binding protein domain AA314_07038 PF00005 ABC transporter AA314_07039 PF02653 Branched-chain amino acid transport system / permease component AA314_07042 PF12544 Lysine-2,3-aminomutase AA314_07042 PF04055 Radical SAM superfamily AA314_07043 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA314_07043 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AA314_07048 PF07690 Major Facilitator Superfamily AA314_07055 PF01523 Putative modulator of DNA gyrase AA314_07056 PF00106 short chain dehydrogenase AA314_07057 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AA314_07057 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AA314_07057 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AA314_07060 PF07152 YaeQ protein AA314_07065 PF09335 SNARE associated Golgi protein AA314_07066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07066 PF00072 Response regulator receiver domain AA314_07066 PF01627 Hpt domain AA314_07066 PF01584 CheW-like domain AA314_07068 PF00072 Response regulator receiver domain AA314_07069 PF02743 Cache domain AA314_07069 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_07069 PF00672 HAMP domain AA314_07070 PF01739 CheR methyltransferase, SAM binding domain AA314_07072 PF00069 Protein kinase domain AA314_07077 PF00749 tRNA synthetases class I (E and Q), catalytic domain AA314_07079 PF00072 Response regulator receiver domain AA314_07081 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07081 PF02743 Cache domain AA314_07081 PF00512 His Kinase A (phospho-acceptor) domain AA314_07084 PF02817 e3 binding domain AA314_07084 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AA314_07084 PF00364 Biotin-requiring enzyme AA314_07085 PF00364 Biotin-requiring enzyme AA314_07085 PF02780 Transketolase, C-terminal domain AA314_07085 PF02779 Transketolase, pyrimidine binding domain AA314_07086 PF00676 Dehydrogenase E1 component AA314_07089 PF00999 Sodium/hydrogen exchanger family AA314_07091 PF00999 Sodium/hydrogen exchanger family AA314_07094 PF00149 Calcineurin-like phosphoesterase AA314_07094 PF02872 5'-nucleotidase, C-terminal domain AA314_07098 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AA314_07098 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AA314_07100 PF01523 Putative modulator of DNA gyrase AA314_07101 PF01523 Putative modulator of DNA gyrase AA314_07102 PF00437 Type II/IV secretion system protein AA314_07102 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AA314_07106 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AA314_07106 PF03900 Porphobilinogen deaminase, C-terminal domain AA314_07107 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AA314_07107 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AA314_07107 PF01488 Shikimate / quinate 5-dehydrogenase AA314_07108 PF01578 Cytochrome C assembly protein AA314_07110 PF00085 Thioredoxin AA314_07113 PF00571 CBS domain AA314_07113 PF03448 MgtE intracellular N domain AA314_07113 PF01769 Divalent cation transporter AA314_07115 PF01098 Cell cycle protein AA314_07116 PF03717 Penicillin-binding Protein dimerisation domain AA314_07116 PF00905 Penicillin binding protein transpeptidase domain AA314_07120 PF05698 Bacterial trigger factor protein (TF) C-terminus AA314_07125 PF00990 Diguanylate cyclase, GGDEF domain AA314_07126 PF02545 Maf-like protein AA314_07127 PF01168 Alanine racemase, N-terminal domain AA314_07136 PF08459 UvrC Helix-hairpin-helix N-terminal AA314_07136 PF12826 Helix-hairpin-helix motif AA314_07136 PF01541 GIY-YIG catalytic domain AA314_07136 PF02151 UvrB/uvrC motif AA314_07137 PF17757 UvrB interaction domain AA314_07137 PF00271 Helicase conserved C-terminal domain AA314_07137 PF12344 Ultra-violet resistance protein B AA314_07137 PF02151 UvrB/uvrC motif AA314_07137 PF04851 Type III restriction enzyme, res subunit AA314_07139 PF03551 Transcriptional regulator PadR-like family AA314_07139 PF13847 Methyltransferase domain AA314_07140 PF09190 DALR domain AA314_07140 PF01406 tRNA synthetases class I (C) catalytic domain AA314_07141 PF16697 Inner membrane component of T3SS, cytoplasmic domain AA314_07143 PF02559 CarD-like/TRCF domain AA314_07144 PF03772 Competence protein AA314_07144 PF00753 Metallo-beta-lactamase superfamily AA314_07149 PF00709 Adenylosuccinate synthetase AA314_07150 PF00580 UvrD/REP helicase N-terminal domain AA314_07150 PF12705 PD-(D/E)XK nuclease superfamily AA314_07150 PF13361 UvrD-like helicase C-terminal domain AA314_07154 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA314_07154 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA314_07158 PF07238 PilZ domain AA314_07158 PF00069 Protein kinase domain AA314_07163 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AA314_07163 PF03033 Glycosyltransferase family 28 N-terminal domain AA314_07167 PF17760 UvrA interaction domain AA314_07167 PF17755 UvrA DNA-binding domain AA314_07174 PF00854 POT family AA314_07175 PF00512 His Kinase A (phospho-acceptor) domain AA314_07175 PF08448 PAS fold AA314_07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07175 PF13426 PAS domain AA314_07175 PF00072 Response regulator receiver domain AA314_07176 PF01209 ubiE/COQ5 methyltransferase family AA314_07179 PF02445 Quinolinate synthetase A protein AA314_07186 PF00069 Protein kinase domain AA314_07186 PF08308 PEGA domain AA314_07188 PF03009 Glycerophosphoryl diester phosphodiesterase family AA314_07190 PF03061 Thioesterase superfamily AA314_07191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07191 PF00512 His Kinase A (phospho-acceptor) domain AA314_07193 PF01521 Iron-sulphur cluster biosynthesis AA314_07194 PF00899 ThiF family AA314_07196 PF00069 Protein kinase domain AA314_07201 PF12161 HsdM N-terminal domain AA314_07201 PF02384 N-6 DNA Methylase AA314_07202 PF01420 Type I restriction modification DNA specificity domain AA314_07204 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AA314_07204 PF00271 Helicase conserved C-terminal domain AA314_07204 PF08463 EcoEI R protein C-terminal AA314_07204 PF04851 Type III restriction enzyme, res subunit AA314_07207 PF02223 Thymidylate kinase AA314_07210 PF16656 Purple acid Phosphatase, N-terminal domain AA314_07210 PF00149 Calcineurin-like phosphoesterase AA314_07212 PF01189 16S rRNA methyltransferase RsmB/F AA314_07212 PF01029 NusB family AA314_07217 PF01351 Ribonuclease HII AA314_07220 PF07804 HipA-like C-terminal domain AA314_07220 PF13657 HipA N-terminal domain AA314_07223 PF17820 PDZ domain AA314_07223 PF02163 Peptidase family M50 AA314_07225 PF02391 MoaE protein AA314_07229 PF02774 Semialdehyde dehydrogenase, dimerisation domain AA314_07229 PF01118 Semialdehyde dehydrogenase, NAD binding domain AA314_07231 PF00672 HAMP domain AA314_07231 PF02743 Cache domain AA314_07231 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_07233 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_07233 PF05698 Bacterial trigger factor protein (TF) C-terminus AA314_07233 PF05697 Bacterial trigger factor protein (TF) AA314_07235 PF00805 Pentapeptide repeats (8 copies) AA314_07235 PF00069 Protein kinase domain AA314_07236 PF00069 Protein kinase domain AA314_07236 PF00805 Pentapeptide repeats (8 copies) AA314_07237 PF00814 Glycoprotease family AA314_07238 PF03330 Lytic transglycolase AA314_07239 PF17820 PDZ domain AA314_07239 PF02163 Peptidase family M50 AA314_07241 PF01255 Putative undecaprenyl diphosphate synthase AA314_07242 PF07714 Protein tyrosine kinase AA314_07243 PF00849 RNA pseudouridylate synthase AA314_07246 PF12626 Polymerase A arginine-rich C-terminus AA314_07246 PF12627 Probable RNA and SrmB- binding site of polymerase A AA314_07246 PF01743 Poly A polymerase head domain AA314_07248 PF01931 Protein of unknown function DUF84 AA314_07249 PF01931 Protein of unknown function DUF84 AA314_07252 PF00285 Citrate synthase, C-terminal domain AA314_07253 PF00067 Cytochrome P450 AA314_07258 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AA314_07258 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AA314_07259 PF00183 Hsp90 protein AA314_07265 PF00384 Molybdopterin oxidoreductase AA314_07265 PF01568 Molydopterin dinucleotide binding domain AA314_07265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA314_07268 PF00037 4Fe-4S binding domain AA314_07268 PF13247 4Fe-4S dicluster domain AA314_07270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA314_07271 PF01494 FAD binding domain AA314_07274 PF07883 Cupin domain AA314_07275 PF03466 LysR substrate binding domain AA314_07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_07276 PF00574 Clp protease AA314_07277 PF00106 short chain dehydrogenase AA314_07282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07282 PF00512 His Kinase A (phospho-acceptor) domain AA314_07282 PF13188 PAS domain AA314_07282 PF08448 PAS fold AA314_07282 PF00072 Response regulator receiver domain AA314_07285 PF02504 Fatty acid synthesis protein AA314_07291 PF00731 AIR carboxylase AA314_07292 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AA314_07292 PF02222 ATP-grasp domain AA314_07293 PF04073 Aminoacyl-tRNA editing domain AA314_07295 PF13823 Alcohol dehydrogenase GroES-associated AA314_07295 PF08240 Alcohol dehydrogenase GroES-like domain AA314_07295 PF00107 Zinc-binding dehydrogenase AA314_07296 PF12697 Alpha/beta hydrolase family AA314_07297 PF00072 Response regulator receiver domain AA314_07297 PF09308 LuxQ, periplasmic AA314_07297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07297 PF00512 His Kinase A (phospho-acceptor) domain AA314_07298 PF01451 Low molecular weight phosphotyrosine protein phosphatase AA314_07305 PF01636 Phosphotransferase enzyme family AA314_07315 PF04264 YceI-like domain AA314_07316 PF03466 LysR substrate binding domain AA314_07316 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_07317 PF02678 Pirin AA314_07317 PF05726 Pirin C-terminal cupin domain AA314_07320 PF10365 Domain of unknown function (DUF2436) AA314_07320 PF07675 Cleaved Adhesin Domain AA314_07321 PF03150 Di-haem cytochrome c peroxidase AA314_07321 PF00034 Cytochrome c AA314_07325 PF00675 Insulinase (Peptidase family M16) AA314_07325 PF05193 Peptidase M16 inactive domain AA314_07327 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_07327 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_07334 PF00106 short chain dehydrogenase AA314_07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_07335 PF03466 LysR substrate binding domain AA314_07339 PF07690 Major Facilitator Superfamily AA314_07341 PF00072 Response regulator receiver domain AA314_07341 PF02954 Bacterial regulatory protein, Fis family AA314_07341 PF00158 Sigma-54 interaction domain AA314_07343 PF00263 Bacterial type II and III secretion system protein AA314_07343 PF03958 Bacterial type II/III secretion system short domain AA314_07345 PF00482 Type II secretion system (T2SS), protein F AA314_07347 PF07963 Prokaryotic N-terminal methylation motif AA314_07347 PF08334 Type II secretion system (T2SS), protein G AA314_07350 PF02501 Type II secretion system (T2SS), protein I AA314_07350 PF07963 Prokaryotic N-terminal methylation motif AA314_07356 PF02954 Bacterial regulatory protein, Fis family AA314_07356 PF00072 Response regulator receiver domain AA314_07356 PF00158 Sigma-54 interaction domain AA314_07357 PF08281 Sigma-70, region 4 AA314_07357 PF04542 Sigma-70 region 2 AA314_07359 PF10459 Peptidase S46 AA314_07361 PF16123 Hydroxyacylglutathione hydrolase C-terminus AA314_07361 PF00753 Metallo-beta-lactamase superfamily AA314_07363 PF03989 DNA gyrase C-terminal domain, beta-propeller AA314_07363 PF00521 DNA gyrase/topoisomerase IV, subunit A AA314_07365 PF01751 Toprim domain AA314_07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07365 PF00986 DNA gyrase B subunit, carboxyl terminus AA314_07365 PF00204 DNA gyrase B AA314_07368 PF01343 Peptidase family S49 AA314_07369 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA314_07369 PF07498 Rho termination factor, N-terminal domain AA314_07369 PF07497 Rho termination factor, RNA-binding domain AA314_07370 PF00561 alpha/beta hydrolase fold AA314_07370 PF08386 TAP-like protein AA314_07371 PF00069 Protein kinase domain AA314_07373 PF00462 Glutaredoxin AA314_07374 PF00571 CBS domain AA314_07374 PF00478 IMP dehydrogenase / GMP reductase domain AA314_07385 PF13538 UvrD-like helicase C-terminal domain AA314_07389 PF12849 PBP superfamily domain AA314_07393 PF17863 AAA lid domain AA314_07393 PF07726 ATPase family associated with various cellular activities (AAA) AA314_07397 PF00069 Protein kinase domain AA314_07397 PF03793 PASTA domain AA314_07398 PF03793 PASTA domain AA314_07398 PF00069 Protein kinase domain AA314_07399 PF00069 Protein kinase domain AA314_07399 PF03793 PASTA domain AA314_07402 PF07238 PilZ domain AA314_07402 PF00069 Protein kinase domain AA314_07403 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_07404 PF03330 Lytic transglycolase AA314_07410 PF02954 Bacterial regulatory protein, Fis family AA314_07410 PF00072 Response regulator receiver domain AA314_07410 PF00158 Sigma-54 interaction domain AA314_07411 PF03793 PASTA domain AA314_07411 PF00069 Protein kinase domain AA314_07413 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AA314_07421 PF13575 Domain of unknown function (DUF4135) AA314_07421 PF05147 Lanthionine synthetase C-like protein AA314_07424 PF16697 Inner membrane component of T3SS, cytoplasmic domain AA314_07425 PF00771 FHIPEP family AA314_07431 PF02080 TrkA-C domain AA314_07431 PF03600 Citrate transporter AA314_07432 PF03600 Citrate transporter AA314_07432 PF02080 TrkA-C domain AA314_07443 PF01312 FlhB HrpN YscU SpaS Family AA314_07444 PF01312 FlhB HrpN YscU SpaS Family AA314_07445 PF01311 Bacterial export proteins, family 1 AA314_07446 PF01313 Bacterial export proteins, family 3 AA314_07447 PF00813 FliP family AA314_07449 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AA314_07449 PF04509 CheC-like family AA314_07452 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA314_07452 PF18269 T3SS EscN ATPase C-terminal domain AA314_07452 PF02874 ATP synthase alpha/beta family, beta-barrel domain AA314_07453 PF02108 Flagellar assembly protein FliH AA314_07455 PF01514 Secretory protein of YscJ/FliF family AA314_07457 PF04545 Sigma-70, region 4 AA314_07457 PF04539 Sigma-70 region 3 AA314_07457 PF04542 Sigma-70 region 2 AA314_07464 PF00005 ABC transporter AA314_07466 PF00005 ABC transporter AA314_07466 PF12704 MacB-like periplasmic core domain AA314_07471 PF12792 CSS motif domain associated with EAL AA314_07471 PF00563 EAL domain AA314_07475 PF13091 PLD-like domain AA314_07475 PF13396 Phospholipase_D-nuclease N-terminal AA314_07484 PF00583 Acetyltransferase (GNAT) family AA314_07486 PF00588 SpoU rRNA Methylase family AA314_07490 PF00849 RNA pseudouridylate synthase AA314_07490 PF01479 S4 domain AA314_07492 PF14492 Elongation Factor G, domain II AA314_07492 PF00009 Elongation factor Tu GTP binding domain AA314_07492 PF03764 Elongation factor G, domain IV AA314_07492 PF00679 Elongation factor G C-terminus AA314_07492 PF03144 Elongation factor Tu domain 2 AA314_07493 PF00271 Helicase conserved C-terminal domain AA314_07493 PF00270 DEAD/DEAH box helicase AA314_07494 PF00005 ABC transporter AA314_07494 PF16326 ABC transporter C-terminal domain AA314_07494 PF12848 ABC transporter AA314_07496 PF12848 ABC transporter AA314_07496 PF00005 ABC transporter AA314_07497 PF02798 Glutathione S-transferase, N-terminal domain AA314_07499 PF02913 FAD linked oxidases, C-terminal domain AA314_07499 PF01565 FAD binding domain AA314_07502 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_07503 PF00375 Sodium:dicarboxylate symporter family AA314_07504 PF01555 DNA methylase AA314_07507 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AA314_07508 PF00578 AhpC/TSA family AA314_07514 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA314_07514 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA314_07516 PF12697 Alpha/beta hydrolase family AA314_07519 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_07519 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_07519 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_07520 PF00282 Pyridoxal-dependent decarboxylase conserved domain AA314_07522 PF03793 PASTA domain AA314_07522 PF00069 Protein kinase domain AA314_07523 PF00069 Protein kinase domain AA314_07523 PF03793 PASTA domain AA314_07539 PF17760 UvrA interaction domain AA314_07539 PF17755 UvrA DNA-binding domain AA314_07539 PF00005 ABC transporter AA314_07540 PF00067 Cytochrome P450 AA314_07541 PF00067 Cytochrome P450 AA314_07542 PF00067 Cytochrome P450 AA314_07543 PF13180 PDZ domain AA314_07543 PF17820 PDZ domain AA314_07544 PF00512 His Kinase A (phospho-acceptor) domain AA314_07544 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07544 PF02743 Cache domain AA314_07545 PF00027 Cyclic nucleotide-binding domain AA314_07545 PF00520 Ion transport protein AA314_07546 PF00072 Response regulator receiver domain AA314_07546 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_07547 PF00069 Protein kinase domain AA314_07548 PF13545 Crp-like helix-turn-helix domain AA314_07548 PF00027 Cyclic nucleotide-binding domain AA314_07549 PF02127 Aminopeptidase I zinc metalloprotease (M18) AA314_07557 PF00578 AhpC/TSA family AA314_07559 PF04542 Sigma-70 region 2 AA314_07559 PF08281 Sigma-70, region 4 AA314_07567 PF00132 Bacterial transferase hexapeptide (six repeats) AA314_07568 PF00291 Pyridoxal-phosphate dependent enzyme AA314_07573 PF08308 PEGA domain AA314_07573 PF00069 Protein kinase domain AA314_07578 PF00069 Protein kinase domain AA314_07580 PF00266 Aminotransferase class-V AA314_07582 PF00326 Prolyl oligopeptidase family AA314_07582 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AA314_07582 PF07676 WD40-like Beta Propeller Repeat AA314_07584 PF04241 Protein of unknown function (DUF423) AA314_07586 PF07689 KaiB domain AA314_07586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07586 PF00512 His Kinase A (phospho-acceptor) domain AA314_07587 PF01627 Hpt domain AA314_07587 PF00672 HAMP domain AA314_07587 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07587 PF00072 Response regulator receiver domain AA314_07587 PF00512 His Kinase A (phospho-acceptor) domain AA314_07587 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_07588 PF03705 CheR methyltransferase, all-alpha domain AA314_07588 PF01739 CheR methyltransferase, SAM binding domain AA314_07590 PF11842 Domain of unknown function (DUF3362) AA314_07590 PF04055 Radical SAM superfamily AA314_07590 PF08497 Radical SAM N-terminal AA314_07592 PF13419 Haloacid dehalogenase-like hydrolase AA314_07595 PF00106 short chain dehydrogenase AA314_07603 PF00486 Transcriptional regulatory protein, C terminal AA314_07603 PF00072 Response regulator receiver domain AA314_07604 PF01339 CheB methylesterase AA314_07604 PF00072 Response regulator receiver domain AA314_07605 PF01627 Hpt domain AA314_07605 PF00072 Response regulator receiver domain AA314_07605 PF01584 CheW-like domain AA314_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07605 PF01584 CheW-like domain AA314_07605 PF01627 Hpt domain AA314_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07605 PF00072 Response regulator receiver domain AA314_07606 PF00672 HAMP domain AA314_07606 PF17200 Single Cache domain 2 AA314_07606 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_07608 PF03705 CheR methyltransferase, all-alpha domain AA314_07608 PF01739 CheR methyltransferase, SAM binding domain AA314_07613 PF00912 Transglycosylase AA314_07615 PF00465 Iron-containing alcohol dehydrogenase AA314_07620 PF02146 Sir2 family AA314_07623 PF07689 KaiB domain AA314_07623 PF00512 His Kinase A (phospho-acceptor) domain AA314_07623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07625 PF00106 short chain dehydrogenase AA314_07627 PF01594 AI-2E family transporter AA314_07638 PF16363 GDP-mannose 4,6 dehydratase AA314_07639 PF13302 Acetyltransferase (GNAT) domain AA314_07639 PF00027 Cyclic nucleotide-binding domain AA314_07642 PF10502 Signal peptidase, peptidase S26 AA314_07643 PF00009 Elongation factor Tu GTP binding domain AA314_07643 PF14492 Elongation Factor G, domain II AA314_07643 PF03764 Elongation factor G, domain IV AA314_07643 PF00679 Elongation factor G C-terminus AA314_07645 PF07963 Prokaryotic N-terminal methylation motif AA314_07645 PF14245 Type IV pilin PilA AA314_07663 PF04151 Bacterial pre-peptidase C-terminal domain AA314_07663 PF00082 Subtilase family AA314_07663 PF05922 Peptidase inhibitor I9 AA314_07669 PF03193 RsgA GTPase AA314_07676 PF13419 Haloacid dehalogenase-like hydrolase AA314_07677 PF00512 His Kinase A (phospho-acceptor) domain AA314_07677 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07681 PF02146 Sir2 family AA314_07682 PF08240 Alcohol dehydrogenase GroES-like domain AA314_07682 PF00107 Zinc-binding dehydrogenase AA314_07683 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AA314_07686 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AA314_07686 PF01835 MG2 domain AA314_07686 PF07703 Alpha-2-macroglobulin bait region domain AA314_07686 PF00207 Alpha-2-macroglobulin family AA314_07687 PF06832 Penicillin-Binding Protein C-terminus Family AA314_07687 PF00912 Transglycosylase AA314_07687 PF00905 Penicillin binding protein transpeptidase domain AA314_07688 PF00583 Acetyltransferase (GNAT) family AA314_07689 PF01209 ubiE/COQ5 methyltransferase family AA314_07692 PF00069 Protein kinase domain AA314_07692 PF03793 PASTA domain AA314_07695 PF00975 Thioesterase domain AA314_07697 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_07697 PF03413 Peptidase propeptide and YPEB domain AA314_07697 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_07697 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_07698 PF02463 RecF/RecN/SMC N terminal domain AA314_07702 PF08281 Sigma-70, region 4 AA314_07702 PF04542 Sigma-70 region 2 AA314_07703 PF04304 Protein of unknown function (DUF454) AA314_07704 PF16123 Hydroxyacylglutathione hydrolase C-terminus AA314_07704 PF00753 Metallo-beta-lactamase superfamily AA314_07711 PF00069 Protein kinase domain AA314_07715 PF00005 ABC transporter AA314_07717 PF00085 Thioredoxin AA314_07718 PF04328 Selenoprotein, putative AA314_07719 PF13722 5TM C-terminal transporter carbon starvation CstA AA314_07719 PF02554 Carbon starvation protein CstA AA314_07721 PF00437 Type II/IV secretion system protein AA314_07729 PF00732 GMC oxidoreductase AA314_07729 PF05199 GMC oxidoreductase AA314_07741 PF00391 PEP-utilising enzyme, mobile domain AA314_07741 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AA314_07742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07742 PF00512 His Kinase A (phospho-acceptor) domain AA314_07745 PF03793 PASTA domain AA314_07745 PF00069 Protein kinase domain AA314_07749 PF08544 GHMP kinases C terminal AA314_07749 PF00288 GHMP kinases N terminal domain AA314_07749 PF10509 Galactokinase galactose-binding signature AA314_07750 PF01263 Aldose 1-epimerase AA314_07751 PF13091 PLD-like domain AA314_07751 PF13396 Phospholipase_D-nuclease N-terminal AA314_07758 PF00149 Calcineurin-like phosphoesterase AA314_07761 PF00667 FAD binding domain AA314_07761 PF00258 Flavodoxin AA314_07761 PF00067 Cytochrome P450 AA314_07761 PF00175 Oxidoreductase NAD-binding domain AA314_07764 PF01938 TRAM domain AA314_07764 PF05958 tRNA (Uracil-5-)-methyltransferase AA314_07767 PF00528 Binding-protein-dependent transport system inner membrane component AA314_07769 PF17912 MalK OB fold domain AA314_07769 PF00005 ABC transporter AA314_07773 PF03129 Anticodon binding domain AA314_07773 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AA314_07775 PF02659 Putative manganese efflux pump AA314_07784 PF00722 Glycosyl hydrolases family 16 AA314_07787 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_07787 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_07787 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_07788 PF01039 Carboxyl transferase domain AA314_07789 PF00364 Biotin-requiring enzyme AA314_07789 PF02785 Biotin carboxylase C-terminal domain AA314_07789 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA314_07789 PF00289 Biotin carboxylase, N-terminal domain AA314_07790 PF02743 Cache domain AA314_07790 PF00672 HAMP domain AA314_07790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_07791 PF00171 Aldehyde dehydrogenase family AA314_07794 PF00069 Protein kinase domain AA314_07797 PF01979 Amidohydrolase family AA314_07798 PF03793 PASTA domain AA314_07798 PF00069 Protein kinase domain AA314_07811 PF07995 Glucose / Sorbosone dehydrogenase AA314_07817 PF00106 short chain dehydrogenase AA314_07819 PF01638 HxlR-like helix-turn-helix AA314_07822 PF13649 Methyltransferase domain AA314_07828 PF00675 Insulinase (Peptidase family M16) AA314_07828 PF05193 Peptidase M16 inactive domain AA314_07830 PF00691 OmpA family AA314_07834 PF00282 Pyridoxal-dependent decarboxylase conserved domain AA314_07837 PF00578 AhpC/TSA family AA314_07840 PF13180 PDZ domain AA314_07844 PF01259 SAICAR synthetase AA314_07845 PF00753 Metallo-beta-lactamase superfamily AA314_07846 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_07846 PF00672 HAMP domain AA314_07846 PF12729 Four helix bundle sensory module for signal transduction AA314_07852 PF00652 Ricin-type beta-trefoil lectin domain AA314_07852 PF02983 Alpha-lytic protease prodomain AA314_07857 PF00072 Response regulator receiver domain AA314_07857 PF00196 Bacterial regulatory proteins, luxR family AA314_07858 PF00892 EamA-like transporter family AA314_07859 PF10014 2OG-Fe dioxygenase AA314_07862 PF00753 Metallo-beta-lactamase superfamily AA314_07862 PF16123 Hydroxyacylglutathione hydrolase C-terminus AA314_07863 PF03466 LysR substrate binding domain AA314_07863 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_07865 PF00593 TonB dependent receptor AA314_07867 PF00400 WD domain, G-beta repeat AA314_07867 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_07869 PF00561 alpha/beta hydrolase fold AA314_07871 PF11954 Domain of unknown function (DUF3471) AA314_07871 PF00144 Beta-lactamase AA314_07873 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07873 PF13188 PAS domain AA314_07873 PF00512 His Kinase A (phospho-acceptor) domain AA314_07873 PF00072 Response regulator receiver domain AA314_07873 PF08448 PAS fold AA314_07874 PF10397 Adenylosuccinate lyase C-terminus AA314_07874 PF00206 Lyase AA314_07876 PF03793 PASTA domain AA314_07876 PF00069 Protein kinase domain AA314_07877 PF00692 dUTPase AA314_07878 PF04225 Opacity-associated protein A LysM-like domain AA314_07878 PF01551 Peptidase family M23 AA314_07880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA314_07882 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AA314_07882 PF01138 3' exoribonuclease family, domain 1 AA314_07882 PF03725 3' exoribonuclease family, domain 2 AA314_07882 PF00575 S1 RNA binding domain AA314_07882 PF00013 KH domain AA314_07884 PF09157 Pseudouridine synthase II TruB, C-terminal AA314_07884 PF16198 tRNA pseudouridylate synthase B C-terminal domain AA314_07884 PF01509 TruB family pseudouridylate synthase (N terminal domain) AA314_07885 PF02033 Ribosome-binding factor A AA314_07887 PF00009 Elongation factor Tu GTP binding domain AA314_07887 PF04760 Translation initiation factor IF-2, N-terminal region AA314_07887 PF11987 Translation-initiation factor 2 AA314_07888 PF00575 S1 RNA binding domain AA314_07888 PF13184 NusA-like KH domain AA314_07888 PF08529 NusA N-terminal domain AA314_07889 PF17384 RimP C-terminal SH3 domain AA314_07889 PF02576 RimP N-terminal domain AA314_07890 PF00795 Carbon-nitrogen hydrolase AA314_07895 PF00069 Protein kinase domain AA314_07895 PF08308 PEGA domain AA314_07897 PF01668 SmpB protein AA314_07898 PF02569 Pantoate-beta-alanine ligase AA314_07899 PF02548 Ketopantoate hydroxymethyltransferase AA314_07900 PF01712 Deoxynucleoside kinase AA314_07903 PF00398 Ribosomal RNA adenine dimethylase AA314_07904 PF00814 Glycoprotease family AA314_07905 PF00486 Transcriptional regulatory protein, C terminal AA314_07905 PF00072 Response regulator receiver domain AA314_07907 PF00588 SpoU rRNA Methylase family AA314_07912 PF00483 Nucleotidyl transferase AA314_07914 PF00291 Pyridoxal-phosphate dependent enzyme AA314_07914 PF00571 CBS domain AA314_07917 PF01627 Hpt domain AA314_07917 PF00989 PAS fold AA314_07917 PF18415 Histidine kinase receptor ArcB trans-membrane domain AA314_07917 PF00512 His Kinase A (phospho-acceptor) domain AA314_07917 PF00072 Response regulator receiver domain AA314_07917 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07918 PF00486 Transcriptional regulatory protein, C terminal AA314_07918 PF00072 Response regulator receiver domain AA314_07920 PF01432 Peptidase family M3 AA314_07925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_07925 PF03466 LysR substrate binding domain AA314_07926 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AA314_07926 PF00326 Prolyl oligopeptidase family AA314_07934 PF00561 alpha/beta hydrolase fold AA314_07939 PF08448 PAS fold AA314_07939 PF00072 Response regulator receiver domain AA314_07939 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_07939 PF13188 PAS domain AA314_07939 PF00512 His Kinase A (phospho-acceptor) domain AA314_07943 PF00873 AcrB/AcrD/AcrF family AA314_07944 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA314_07944 PF00529 HlyD membrane-fusion protein of T1SS AA314_07945 PF01053 Cys/Met metabolism PLP-dependent enzyme AA314_07946 PF10672 S-adenosylmethionine-dependent methyltransferase AA314_07949 PF04186 FxsA cytoplasmic membrane protein AA314_07951 PF17785 PUA-like domain AA314_07951 PF10672 S-adenosylmethionine-dependent methyltransferase AA314_07954 PF02595 Glycerate kinase family AA314_07963 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AA314_07963 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AA314_07963 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AA314_07968 PF00719 Inorganic pyrophosphatase AA314_07969 PF00152 tRNA synthetases class II (D, K and N) AA314_07974 PF00005 ABC transporter AA314_07975 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AA314_07983 PF00072 Response regulator receiver domain AA314_07983 PF00486 Transcriptional regulatory protein, C terminal AA314_07984 PF00378 Enoyl-CoA hydratase/isomerase AA314_07985 PF00364 Biotin-requiring enzyme AA314_07986 PF00289 Biotin carboxylase, N-terminal domain AA314_07986 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA314_07986 PF02785 Biotin carboxylase C-terminal domain AA314_07989 PF00091 Tubulin/FtsZ family, GTPase domain AA314_07989 PF12327 FtsZ family, C-terminal domain AA314_07990 PF00004 ATPase family associated with various cellular activities (AAA) AA314_07990 PF16193 AAA C-terminal domain AA314_07990 PF12002 MgsA AAA+ ATPase C terminal AA314_07994 PF00144 Beta-lactamase AA314_08003 PF02491 SHS2 domain inserted in FTSA AA314_08004 PF08478 POTRA domain, FtsQ-type AA314_08004 PF03799 Cell division protein FtsQ AA314_08005 PF07478 D-ala D-ala ligase C-terminus AA314_08005 PF01820 D-ala D-ala ligase N-terminus AA314_08006 PF01565 FAD binding domain AA314_08006 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AA314_08007 PF01225 Mur ligase family, catalytic domain AA314_08007 PF08245 Mur ligase middle domain AA314_08007 PF02875 Mur ligase family, glutamate ligase domain AA314_08008 PF03033 Glycosyltransferase family 28 N-terminal domain AA314_08008 PF04101 Glycosyltransferase family 28 C-terminal domain AA314_08009 PF01098 Cell cycle protein AA314_08010 PF02875 Mur ligase family, glutamate ligase domain AA314_08010 PF08245 Mur ligase middle domain AA314_08011 PF00953 Glycosyl transferase family 4 AA314_08011 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AA314_08012 PF08245 Mur ligase middle domain AA314_08012 PF01225 Mur ligase family, catalytic domain AA314_08012 PF02875 Mur ligase family, glutamate ligase domain AA314_08013 PF08245 Mur ligase middle domain AA314_08013 PF01225 Mur ligase family, catalytic domain AA314_08013 PF02875 Mur ligase family, glutamate ligase domain AA314_08014 PF00905 Penicillin binding protein transpeptidase domain AA314_08014 PF03717 Penicillin-binding Protein dimerisation domain AA314_08015 PF04977 Septum formation initiator AA314_08016 PF01795 MraW methylase family AA314_08018 PF02381 MraZ protein, putative antitoxin-like AA314_08021 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_08021 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_08021 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_08031 PF00465 Iron-containing alcohol dehydrogenase AA314_08032 PF03951 Glutamine synthetase, beta-Grasp domain AA314_08032 PF00120 Glutamine synthetase, catalytic domain AA314_08033 PF00171 Aldehyde dehydrogenase family AA314_08034 PF00958 GMP synthase C terminal domain AA314_08034 PF00117 Glutamine amidotransferase class-I AA314_08036 PF01594 AI-2E family transporter AA314_08038 PF07498 Rho termination factor, N-terminal domain AA314_08038 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA314_08038 PF07497 Rho termination factor, RNA-binding domain AA314_08040 PF01653 NAD-dependent DNA ligase adenylation domain AA314_08040 PF00533 BRCA1 C Terminus (BRCT) domain AA314_08040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AA314_08040 PF12826 Helix-hairpin-helix motif AA314_08040 PF03120 NAD-dependent DNA ligase OB-fold domain AA314_08041 PF01653 NAD-dependent DNA ligase adenylation domain AA314_08041 PF00533 BRCA1 C Terminus (BRCT) domain AA314_08041 PF12826 Helix-hairpin-helix motif AA314_08041 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AA314_08041 PF03120 NAD-dependent DNA ligase OB-fold domain AA314_08042 PF00708 Acylphosphatase AA314_08044 PF00575 S1 RNA binding domain AA314_08044 PF10150 Ribonuclease E/G family AA314_08044 PF10150 Ribonuclease E/G family AA314_08044 PF00575 S1 RNA binding domain AA314_08045 PF03631 Virulence factor BrkB AA314_08046 PF00216 Bacterial DNA-binding protein AA314_08047 PF00771 FHIPEP family AA314_08048 PF01312 FlhB HrpN YscU SpaS Family AA314_08050 PF01313 Bacterial export proteins, family 3 AA314_08051 PF00813 FliP family AA314_08055 PF01514 Secretory protein of YscJ/FliF family AA314_08059 PF00072 Response regulator receiver domain AA314_08059 PF00486 Transcriptional regulatory protein, C terminal AA314_08060 PF12704 MacB-like periplasmic core domain AA314_08060 PF00005 ABC transporter AA314_08060 PF02687 FtsX-like permease family AA314_08061 PF07714 Protein tyrosine kinase AA314_08069 PF00719 Inorganic pyrophosphatase AA314_08070 PF00082 Subtilase family AA314_08076 PF00005 ABC transporter AA314_08080 PF00092 von Willebrand factor type A domain AA314_08083 PF01882 Protein of unknown function DUF58 AA314_08084 PF17863 AAA lid domain AA314_08084 PF07726 ATPase family associated with various cellular activities (AAA) AA314_08085 PF12697 Alpha/beta hydrolase family AA314_08088 PF10127 RNA repair pathway DNA polymerase beta family AA314_08094 PF04717 Type VI secretion system, phage-baseplate injector AA314_08095 PF04717 Type VI secretion system, phage-baseplate injector AA314_08098 PF07714 Protein tyrosine kinase AA314_08102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08102 PF00672 HAMP domain AA314_08102 PF00989 PAS fold AA314_08102 PF00512 His Kinase A (phospho-acceptor) domain AA314_08109 PF08308 PEGA domain AA314_08109 PF00069 Protein kinase domain AA314_08110 PF00535 Glycosyl transferase family 2 AA314_08111 PF00226 DnaJ domain AA314_08111 PF01556 DnaJ C terminal domain AA314_08111 PF00684 DnaJ central domain AA314_08115 PF07237 Protein of unknown function (DUF1428) AA314_08120 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AA314_08120 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AA314_08126 PF00072 Response regulator receiver domain AA314_08126 PF04397 LytTr DNA-binding domain AA314_08127 PF07694 5TMR of 5TMR-LYT AA314_08127 PF06580 Histidine kinase AA314_08128 PF00561 alpha/beta hydrolase fold AA314_08130 PF09278 MerR, DNA binding AA314_08130 PF00376 MerR family regulatory protein AA314_08131 PF01209 ubiE/COQ5 methyltransferase family AA314_08132 PF00067 Cytochrome P450 AA314_08137 PF00069 Protein kinase domain AA314_08145 PF00571 CBS domain AA314_08145 PF03448 MgtE intracellular N domain AA314_08145 PF01769 Divalent cation transporter AA314_08147 PF08281 Sigma-70, region 4 AA314_08147 PF04542 Sigma-70 region 2 AA314_08147 PF12680 SnoaL-like domain AA314_08149 PF00375 Sodium:dicarboxylate symporter family AA314_08154 PF00924 Mechanosensitive ion channel AA314_08155 PF00072 Response regulator receiver domain AA314_08157 PF01476 LysM domain AA314_08157 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AA314_08166 PF00069 Protein kinase domain AA314_08169 PF12704 MacB-like periplasmic core domain AA314_08169 PF00005 ABC transporter AA314_08169 PF02687 FtsX-like permease family AA314_08175 PF01979 Amidohydrolase family AA314_08176 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AA314_08178 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AA314_08178 PF02885 Glycosyl transferase family, helical bundle domain AA314_08178 PF00591 Glycosyl transferase family, a/b domain AA314_08184 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AA314_08184 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AA314_08184 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AA314_08184 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AA314_08186 PF01791 DeoC/LacD family aldolase AA314_08187 PF12706 Beta-lactamase superfamily domain AA314_08196 PF00300 Histidine phosphatase superfamily (branch 1) AA314_08196 PF13456 Reverse transcriptase-like AA314_08198 PF02881 SRP54-type protein, helical bundle domain AA314_08198 PF00448 SRP54-type protein, GTPase domain AA314_08206 PF01820 D-ala D-ala ligase N-terminus AA314_08206 PF07478 D-ala D-ala ligase C-terminus AA314_08208 PF00067 Cytochrome P450 AA314_08209 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_08209 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_08209 PF00668 Condensation domain AA314_08209 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_08209 PF16197 Ketoacyl-synthetase C-terminal extension AA314_08209 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_08209 PF00668 Condensation domain AA314_08209 PF00550 Phosphopantetheine attachment site AA314_08209 PF00698 Acyl transferase domain AA314_08209 PF00550 Phosphopantetheine attachment site AA314_08209 PF00698 Acyl transferase domain AA314_08209 PF16197 Ketoacyl-synthetase C-terminal extension AA314_08210 PF13193 AMP-binding enzyme C-terminal domain AA314_08210 PF00550 Phosphopantetheine attachment site AA314_08210 PF00668 Condensation domain AA314_08210 PF00501 AMP-binding enzyme AA314_08211 PF07993 Male sterility protein AA314_08211 PF00501 AMP-binding enzyme AA314_08211 PF00550 Phosphopantetheine attachment site AA314_08211 PF00668 Condensation domain AA314_08211 PF13193 AMP-binding enzyme C-terminal domain AA314_08214 PF00561 alpha/beta hydrolase fold AA314_08215 PF13411 MerR HTH family regulatory protein AA314_08218 PF13180 PDZ domain AA314_08221 PF03466 LysR substrate binding domain AA314_08221 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_08222 PF00199 Catalase AA314_08222 PF06628 Catalase-related immune-responsive AA314_08223 PF12796 Ankyrin repeats (3 copies) AA314_08223 PF00023 Ankyrin repeat AA314_08225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AA314_08225 PF03129 Anticodon binding domain AA314_08225 PF02824 TGS domain AA314_08225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AA314_08226 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AA314_08226 PF00056 lactate/malate dehydrogenase, NAD binding domain AA314_08228 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_08228 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_08228 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_08228 PF03413 Peptidase propeptide and YPEB domain AA314_08231 PF13180 PDZ domain AA314_08231 PF03572 Peptidase family S41 AA314_08233 PF01551 Peptidase family M23 AA314_08234 PF18075 FtsX extracellular domain AA314_08235 PF00005 ABC transporter AA314_08238 PF00939 Sodium:sulfate symporter transmembrane region AA314_08241 PF01177 Asp/Glu/Hydantoin racemase AA314_08243 PF01618 MotA/TolQ/ExbB proton channel family AA314_08244 PF02472 Biopolymer transport protein ExbD/TolR AA314_08246 PF04052 TolB amino-terminal domain AA314_08246 PF07676 WD40-like Beta Propeller Repeat AA314_08247 PF02384 N-6 DNA Methylase AA314_08248 PF01420 Type I restriction modification DNA specificity domain AA314_08251 PF02541 Ppx/GppA phosphatase family AA314_08253 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA314_08254 PF00797 N-acetyltransferase AA314_08256 PF00378 Enoyl-CoA hydratase/isomerase AA314_08264 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_08264 PF00400 WD domain, G-beta repeat AA314_08266 PF07244 Surface antigen variable number repeat AA314_08266 PF01103 Surface antigen AA314_08268 PF13401 AAA domain AA314_08268 PF01471 Putative peptidoglycan binding domain AA314_08270 PF00289 Biotin carboxylase, N-terminal domain AA314_08270 PF02785 Biotin carboxylase C-terminal domain AA314_08270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA314_08271 PF00364 Biotin-requiring enzyme AA314_08272 PF09285 Elongation factor P, C-terminal AA314_08272 PF01132 Elongation factor P (EF-P) OB domain AA314_08272 PF08207 Elongation factor P (EF-P) KOW-like domain AA314_08275 PF03958 Bacterial type II/III secretion system short domain AA314_08275 PF00263 Bacterial type II and III secretion system protein AA314_08275 PF11741 AMIN domain AA314_08275 PF07660 Secretin and TonB N terminus short domain AA314_08280 PF00072 Response regulator receiver domain AA314_08280 PF02954 Bacterial regulatory protein, Fis family AA314_08280 PF00158 Sigma-54 interaction domain AA314_08281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08281 PF00512 His Kinase A (phospho-acceptor) domain AA314_08282 PF01478 Type IV leader peptidase family AA314_08282 PF06750 Bacterial Peptidase A24 N-terminal domain AA314_08283 PF07963 Prokaryotic N-terminal methylation motif AA314_08283 PF14245 Type IV pilin PilA AA314_08285 PF00005 ABC transporter AA314_08287 PF00072 Response regulator receiver domain AA314_08287 PF02954 Bacterial regulatory protein, Fis family AA314_08287 PF00158 Sigma-54 interaction domain AA314_08288 PF00512 His Kinase A (phospho-acceptor) domain AA314_08288 PF00989 PAS fold AA314_08288 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08289 PF00482 Type II secretion system (T2SS), protein F AA314_08290 PF00437 Type II/IV secretion system protein AA314_08291 PF00437 Type II/IV secretion system protein AA314_08291 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AA314_08292 PF06574 FAD synthetase AA314_08292 PF01687 Riboflavin kinase AA314_08293 PF02390 Putative methyltransferase AA314_08294 PF00990 Diguanylate cyclase, GGDEF domain AA314_08294 PF00072 Response regulator receiver domain AA314_08299 PF13307 Helicase C-terminal domain AA314_08305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AA314_08305 PF02272 DHHA1 domain AA314_08305 PF01411 tRNA synthetases class II (A) AA314_08307 PF00012 Hsp70 protein AA314_08309 PF01595 Cyclin M transmembrane N-terminal domain AA314_08309 PF00571 CBS domain AA314_08309 PF03471 Transporter associated domain AA314_08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08310 PF00512 His Kinase A (phospho-acceptor) domain AA314_08310 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_08312 PF04107 Glutamate-cysteine ligase family 2(GCS2) AA314_08314 PF13180 PDZ domain AA314_08314 PF03572 Peptidase family S41 AA314_08317 PF03009 Glycerophosphoryl diester phosphodiesterase family AA314_08318 PF02416 mttA/Hcf106 family AA314_08322 PF05233 PHB accumulation regulatory domain AA314_08322 PF07879 PHB/PHA accumulation regulator DNA-binding domain AA314_08324 PF00999 Sodium/hydrogen exchanger family AA314_08325 PF13614 AAA domain AA314_08327 PF02374 Anion-transporting ATPase AA314_08332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08332 PF18698 Histidine kinase sensor domain AA314_08332 PF00512 His Kinase A (phospho-acceptor) domain AA314_08332 PF00672 HAMP domain AA314_08332 PF00989 PAS fold AA314_08334 PF00069 Protein kinase domain AA314_08334 PF07238 PilZ domain AA314_08339 PF03652 Holliday junction resolvase AA314_08340 PF02618 YceG-like family AA314_08343 PF00989 PAS fold AA314_08343 PF00512 His Kinase A (phospho-acceptor) domain AA314_08343 PF18698 Histidine kinase sensor domain AA314_08343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08343 PF00672 HAMP domain AA314_08344 PF00512 His Kinase A (phospho-acceptor) domain AA314_08344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08345 PF00512 His Kinase A (phospho-acceptor) domain AA314_08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08345 PF00672 HAMP domain AA314_08348 PF00989 PAS fold AA314_08348 PF00512 His Kinase A (phospho-acceptor) domain AA314_08348 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08349 PF00486 Transcriptional regulatory protein, C terminal AA314_08349 PF00072 Response regulator receiver domain AA314_08352 PF01627 Hpt domain AA314_08352 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_08352 PF00072 Response regulator receiver domain AA314_08352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08352 PF00512 His Kinase A (phospho-acceptor) domain AA314_08353 PF00005 ABC transporter AA314_08355 PF08298 PrkA AAA domain AA314_08355 PF06798 PrkA serine protein kinase C-terminal domain AA314_08356 PF04285 Protein of unknown function (DUF444) AA314_08357 PF04293 SpoVR like protein AA314_08358 PF04225 Opacity-associated protein A LysM-like domain AA314_08358 PF01551 Peptidase family M23 AA314_08362 PF00343 Carbohydrate phosphorylase AA314_08366 PF00378 Enoyl-CoA hydratase/isomerase AA314_08368 PF02811 PHP domain AA314_08368 PF07733 Bacterial DNA polymerase III alpha NTPase domain AA314_08368 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AA314_08368 PF14579 Helix-hairpin-helix motif AA314_08368 PF01336 OB-fold nucleic acid binding domain AA314_08371 PF00248 Aldo/keto reductase family AA314_08373 PF00360 Phytochrome region AA314_08373 PF08446 PAS fold AA314_08373 PF00512 His Kinase A (phospho-acceptor) domain AA314_08373 PF01590 GAF domain AA314_08373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08374 PF01565 FAD binding domain AA314_08374 PF02913 FAD linked oxidases, C-terminal domain AA314_08375 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AA314_08375 PF01266 FAD dependent oxidoreductase AA314_08389 PF00069 Protein kinase domain AA314_08390 PF01425 Amidase AA314_08393 PF13677 Membrane MotB of proton-channel complex MotA/MotB AA314_08393 PF00691 OmpA family AA314_08395 PF01266 FAD dependent oxidoreductase AA314_08396 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase AA314_08399 PF00067 Cytochrome P450 AA314_08402 PF17760 UvrA interaction domain AA314_08402 PF17755 UvrA DNA-binding domain AA314_08403 PF00005 ABC transporter AA314_08403 PF17760 UvrA interaction domain AA314_08403 PF17755 UvrA DNA-binding domain AA314_08405 PF06483 Chitinase C AA314_08405 PF00704 Glycosyl hydrolases family 18 AA314_08415 PF08448 PAS fold AA314_08415 PF00512 His Kinase A (phospho-acceptor) domain AA314_08415 PF13188 PAS domain AA314_08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08415 PF00072 Response regulator receiver domain AA314_08417 PF00072 Response regulator receiver domain AA314_08417 PF00158 Sigma-54 interaction domain AA314_08417 PF02954 Bacterial regulatory protein, Fis family AA314_08418 PF13755 Sensor N-terminal transmembrane domain AA314_08418 PF00512 His Kinase A (phospho-acceptor) domain AA314_08418 PF00672 HAMP domain AA314_08418 PF13756 Stimulus-sensing domain AA314_08418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08420 PF13520 Amino acid permease AA314_08421 PF13193 AMP-binding enzyme C-terminal domain AA314_08421 PF16177 Acetyl-coenzyme A synthetase N-terminus AA314_08421 PF00501 AMP-binding enzyme AA314_08423 PF00474 Sodium:solute symporter family AA314_08424 PF01042 Endoribonuclease L-PSP AA314_08427 PF13530 Sterol carrier protein domain AA314_08427 PF17668 Acetyltransferase (GNAT) domain AA314_08428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08428 PF00183 Hsp90 protein AA314_08432 PF00691 OmpA family AA314_08442 PF05638 Type VI secretion system effector, Hcp AA314_08446 PF00004 ATPase family associated with various cellular activities (AAA) AA314_08446 PF07724 AAA domain (Cdc48 subfamily) AA314_08446 PF17871 AAA lid domain AA314_08446 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_08451 PF00080 Copper/zinc superoxide dismutase (SODC) AA314_08454 PF01979 Amidohydrolase family AA314_08455 PF01380 SIS domain AA314_08457 PF02678 Pirin AA314_08457 PF05726 Pirin C-terminal cupin domain AA314_08459 PF00550 Phosphopantetheine attachment site AA314_08459 PF00668 Condensation domain AA314_08459 PF13193 AMP-binding enzyme C-terminal domain AA314_08459 PF00501 AMP-binding enzyme AA314_08462 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_08462 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_08463 PF07977 FabA-like domain AA314_08465 PF00202 Aminotransferase class-III AA314_08468 PF08240 Alcohol dehydrogenase GroES-like domain AA314_08468 PF00109 Beta-ketoacyl synthase, N-terminal domain AA314_08468 PF08659 KR domain AA314_08468 PF14765 Polyketide synthase dehydratase AA314_08468 PF16197 Ketoacyl-synthetase C-terminal extension AA314_08468 PF00550 Phosphopantetheine attachment site AA314_08468 PF02801 Beta-ketoacyl synthase, C-terminal domain AA314_08468 PF00698 Acyl transferase domain AA314_08470 PF00155 Aminotransferase class I and II AA314_08474 PF13344 Haloacid dehalogenase-like hydrolase AA314_08474 PF00293 NUDIX domain AA314_08481 PF00248 Aldo/keto reductase family AA314_08485 PF13417 Glutathione S-transferase, N-terminal domain AA314_08486 PF03006 Haemolysin-III related AA314_08502 PF00140 Sigma-70 factor, region 1.2 AA314_08502 PF04542 Sigma-70 region 2 AA314_08502 PF04545 Sigma-70, region 4 AA314_08502 PF04539 Sigma-70 region 3 AA314_08503 PF00270 DEAD/DEAH box helicase AA314_08503 PF00271 Helicase conserved C-terminal domain AA314_08504 PF00069 Protein kinase domain AA314_08504 PF14032 PknH-like extracellular domain AA314_08506 PF04542 Sigma-70 region 2 AA314_08506 PF08281 Sigma-70, region 4 AA314_08507 PF01381 Helix-turn-helix AA314_08508 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AA314_08508 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AA314_08509 PF00291 Pyridoxal-phosphate dependent enzyme AA314_08509 PF13291 ACT domain AA314_08513 PF04264 YceI-like domain AA314_08514 PF00158 Sigma-54 interaction domain AA314_08514 PF06505 Activator of aromatic catabolism AA314_08514 PF02830 V4R domain AA314_08514 PF02954 Bacterial regulatory protein, Fis family AA314_08518 PF00108 Thiolase, N-terminal domain AA314_08518 PF02803 Thiolase, C-terminal domain AA314_08523 PF00085 Thioredoxin AA314_08524 PF00072 Response regulator receiver domain AA314_08526 PF00248 Aldo/keto reductase family AA314_08527 PF00171 Aldehyde dehydrogenase family AA314_08528 PF01590 GAF domain AA314_08528 PF00512 His Kinase A (phospho-acceptor) domain AA314_08528 PF08446 PAS fold AA314_08528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08528 PF00360 Phytochrome region AA314_08529 PF01048 Phosphorylase superfamily AA314_08531 PF02397 Bacterial sugar transferase AA314_08532 PF01053 Cys/Met metabolism PLP-dependent enzyme AA314_08533 PF00561 alpha/beta hydrolase fold AA314_08537 PF00080 Copper/zinc superoxide dismutase (SODC) AA314_08537 PF13627 Prokaryotic lipoprotein-attachment site AA314_08539 PF00902 Sec-independent protein translocase protein (TatC) AA314_08539 PF00902 Sec-independent protein translocase protein (TatC) AA314_08540 PF02416 mttA/Hcf106 family AA314_08542 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_08542 PF13426 PAS domain AA314_08542 PF08447 PAS fold AA314_08544 PF00850 Histone deacetylase domain AA314_08546 PF02798 Glutathione S-transferase, N-terminal domain AA314_08546 PF00043 Glutathione S-transferase, C-terminal domain AA314_08553 PF00106 short chain dehydrogenase AA314_08554 PF17092 Penicillin-binding protein OB-like domain AA314_08554 PF00905 Penicillin binding protein transpeptidase domain AA314_08554 PF00912 Transglycosylase AA314_08555 PF00849 RNA pseudouridylate synthase AA314_08555 PF01479 S4 domain AA314_08558 PF01068 ATP dependent DNA ligase domain AA314_08558 PF04679 ATP dependent DNA ligase C terminal region AA314_08558 PF04675 DNA ligase N terminus AA314_08567 PF00766 Electron transfer flavoprotein FAD-binding domain AA314_08567 PF01012 Electron transfer flavoprotein domain AA314_08568 PF01012 Electron transfer flavoprotein domain AA314_08569 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_08569 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_08569 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_08570 PF00923 Transaldolase/Fructose-6-phosphate aldolase AA314_08571 PF01380 SIS domain AA314_08571 PF00571 CBS domain AA314_08574 PF08281 Sigma-70, region 4 AA314_08574 PF04542 Sigma-70 region 2 AA314_08578 PF00849 RNA pseudouridylate synthase AA314_08580 PF00291 Pyridoxal-phosphate dependent enzyme AA314_08581 PF00067 Cytochrome P450 AA314_08585 PF00067 Cytochrome P450 AA314_08590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AA314_08591 PF01557 Fumarylacetoacetate (FAA) hydrolase family AA314_08592 PF05173 Dihydrodipicolinate reductase, C-terminus AA314_08592 PF01113 Dihydrodipicolinate reductase, N-terminus AA314_08593 PF00701 Dihydrodipicolinate synthetase family AA314_08595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AA314_08595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AA314_08597 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AA314_08597 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AA314_08597 PF06827 Zinc finger found in FPG and IleRS AA314_08598 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AA314_08598 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AA314_08599 PF02735 Ku70/Ku80 beta-barrel domain AA314_08600 PF01435 Peptidase family M48 AA314_08601 PF03631 Virulence factor BrkB AA314_08603 PF00892 EamA-like transporter family AA314_08605 PF08331 Domain of unknown function (DUF1730) AA314_08606 PF01923 Cobalamin adenosyltransferase AA314_08607 PF00303 Thymidylate synthase AA314_08608 PF00186 Dihydrofolate reductase AA314_08610 PF13188 PAS domain AA314_08610 PF00512 His Kinase A (phospho-acceptor) domain AA314_08610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08610 PF00072 Response regulator receiver domain AA314_08610 PF08448 PAS fold AA314_08611 PF00072 Response regulator receiver domain AA314_08612 PF08446 PAS fold AA314_08612 PF00512 His Kinase A (phospho-acceptor) domain AA314_08612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08612 PF01590 GAF domain AA314_08612 PF00360 Phytochrome region AA314_08613 PF16123 Hydroxyacylglutathione hydrolase C-terminus AA314_08613 PF00753 Metallo-beta-lactamase superfamily AA314_08614 PF01966 HD domain AA314_08615 PF07478 D-ala D-ala ligase C-terminus AA314_08615 PF01820 D-ala D-ala ligase N-terminus AA314_08619 PF03190 Protein of unknown function, DUF255 AA314_08625 PF02899 Phage integrase, N-terminal SAM-like domain AA314_08625 PF00589 Phage integrase family AA314_08630 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AA314_08631 PF00005 ABC transporter AA314_08631 PF12704 MacB-like periplasmic core domain AA314_08631 PF02687 FtsX-like permease family AA314_08632 PF03551 Transcriptional regulator PadR-like family AA314_08633 PF00072 Response regulator receiver domain AA314_08633 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_08634 PF03976 Polyphosphate kinase 2 (PPK2) AA314_08635 PF06470 SMC proteins Flexible Hinge Domain AA314_08635 PF02463 RecF/RecN/SMC N terminal domain AA314_08637 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_08637 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_08637 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_08637 PF03413 Peptidase propeptide and YPEB domain AA314_08638 PF04754 Putative transposase, YhgA-like AA314_08643 PF08281 Sigma-70, region 4 AA314_08643 PF04542 Sigma-70 region 2 AA314_08644 PF04235 Protein of unknown function (DUF418) AA314_08646 PF00144 Beta-lactamase AA314_08647 PF03144 Elongation factor Tu domain 2 AA314_08647 PF00009 Elongation factor Tu GTP binding domain AA314_08647 PF03764 Elongation factor G, domain IV AA314_08647 PF14492 Elongation Factor G, domain II AA314_08647 PF00679 Elongation factor G C-terminus AA314_08648 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA314_08648 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA314_08656 PF00561 alpha/beta hydrolase fold AA314_08656 PF00364 Biotin-requiring enzyme AA314_08658 PF00069 Protein kinase domain AA314_08664 PF00144 Beta-lactamase AA314_08668 PF01171 PP-loop family AA314_08669 PF01612 3'-5' exonuclease AA314_08669 PF00570 HRDC domain AA314_08672 PF11838 ERAP1-like C-terminal domain AA314_08672 PF01433 Peptidase family M1 domain AA314_08674 PF13302 Acetyltransferase (GNAT) domain AA314_08676 PF07690 Major Facilitator Superfamily AA314_08678 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AA314_08679 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AA314_08682 PF00009 Elongation factor Tu GTP binding domain AA314_08682 PF03144 Elongation factor Tu domain 2 AA314_08682 PF16658 Class II release factor RF3, C-terminal domain AA314_08683 PF00520 Ion transport protein AA314_08683 PF00027 Cyclic nucleotide-binding domain AA314_08687 PF00005 ABC transporter AA314_08691 PF01546 Peptidase family M20/M25/M40 AA314_08691 PF07687 Peptidase dimerisation domain AA314_08692 PF00196 Bacterial regulatory proteins, luxR family AA314_08692 PF00072 Response regulator receiver domain AA314_08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08695 PF00512 His Kinase A (phospho-acceptor) domain AA314_08696 PF02926 THUMP domain AA314_08696 PF01170 Putative RNA methylase family UPF0020 AA314_08699 PF01106 NifU-like domain AA314_08703 PF02617 ATP-dependent Clp protease adaptor protein ClpS AA314_08704 PF02861 Clp amino terminal domain, pathogenicity island component AA314_08704 PF00004 ATPase family associated with various cellular activities (AAA) AA314_08704 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_08704 PF17871 AAA lid domain AA314_08704 PF07724 AAA domain (Cdc48 subfamily) AA314_08705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_08705 PF00672 HAMP domain AA314_08706 PF00072 Response regulator receiver domain AA314_08706 PF01339 CheB methylesterase AA314_08707 PF01627 Hpt domain AA314_08707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08707 PF01584 CheW-like domain AA314_08707 PF00072 Response regulator receiver domain AA314_08709 PF03705 CheR methyltransferase, all-alpha domain AA314_08709 PF01739 CheR methyltransferase, SAM binding domain AA314_08710 PF00072 Response regulator receiver domain AA314_08711 PF00072 Response regulator receiver domain AA314_08711 PF00196 Bacterial regulatory proteins, luxR family AA314_08713 PF16078 2-oxoglutarate dehydrogenase N-terminus AA314_08713 PF00676 Dehydrogenase E1 component AA314_08713 PF16870 2-oxoglutarate dehydrogenase C-terminal AA314_08713 PF02779 Transketolase, pyrimidine binding domain AA314_08714 PF02817 e3 binding domain AA314_08714 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AA314_08714 PF00364 Biotin-requiring enzyme AA314_08715 PF00313 'Cold-shock' DNA-binding domain AA314_08716 PF00326 Prolyl oligopeptidase family AA314_08716 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AA314_08718 PF00672 HAMP domain AA314_08718 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_08723 PF12146 Serine aminopeptidase, S33 AA314_08730 PF01494 FAD binding domain AA314_08733 PF07859 alpha/beta hydrolase fold AA314_08736 PF00072 Response regulator receiver domain AA314_08736 PF00486 Transcriptional regulatory protein, C terminal AA314_08737 PF01497 Periplasmic binding protein AA314_08739 PF00069 Protein kinase domain AA314_08740 PF07715 TonB-dependent Receptor Plug Domain AA314_08740 PF00593 TonB dependent receptor AA314_08742 PF00158 Sigma-54 interaction domain AA314_08742 PF00072 Response regulator receiver domain AA314_08743 PF01794 Ferric reductase like transmembrane component AA314_08744 PF00174 Oxidoreductase molybdopterin binding domain AA314_08745 PF00487 Fatty acid desaturase AA314_08748 PF01593 Flavin containing amine oxidoreductase AA314_08749 PF02885 Glycosyl transferase family, helical bundle domain AA314_08749 PF00591 Glycosyl transferase family, a/b domain AA314_08750 PF00218 Indole-3-glycerol phosphate synthase AA314_08751 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AA314_08752 PF00291 Pyridoxal-phosphate dependent enzyme AA314_08753 PF00290 Tryptophan synthase alpha chain AA314_08756 PF00300 Histidine phosphatase superfamily (branch 1) AA314_08757 PF00067 Cytochrome P450 AA314_08758 PF00082 Subtilase family AA314_08764 PF00117 Glutamine amidotransferase class-I AA314_08765 PF00425 chorismate binding enzyme AA314_08765 PF04715 Anthranilate synthase component I, N terminal region AA314_08767 PF01965 DJ-1/PfpI family AA314_08769 PF03449 Transcription elongation factor, N-terminal AA314_08769 PF01272 Transcription elongation factor, GreA/GreB, C-term AA314_08771 PF00106 short chain dehydrogenase AA314_08774 PF13247 4Fe-4S dicluster domain AA314_08774 PF00037 4Fe-4S binding domain AA314_08781 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AA314_08782 PF00115 Cytochrome C and Quinol oxidase polypeptide I AA314_08783 PF00510 Cytochrome c oxidase subunit III AA314_08797 PF03621 MbtH-like protein AA314_08798 PF13538 UvrD-like helicase C-terminal domain AA314_08802 PF13361 UvrD-like helicase C-terminal domain AA314_08802 PF00580 UvrD/REP helicase N-terminal domain AA314_08803 PF02463 RecF/RecN/SMC N terminal domain AA314_08806 PF00069 Protein kinase domain AA314_08807 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08807 PF00512 His Kinase A (phospho-acceptor) domain AA314_08807 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_08808 PF00107 Zinc-binding dehydrogenase AA314_08808 PF08240 Alcohol dehydrogenase GroES-like domain AA314_08809 PF02566 OsmC-like protein AA314_08810 PF00296 Luciferase-like monooxygenase AA314_08811 PF01047 MarR family AA314_08812 PF02678 Pirin AA314_08812 PF05726 Pirin C-terminal cupin domain AA314_08819 PF13439 Glycosyltransferase Family 4 AA314_08819 PF00534 Glycosyl transferases group 1 AA314_08821 PF00535 Glycosyl transferase family 2 AA314_08821 PF00534 Glycosyl transferases group 1 AA314_08822 PF00326 Prolyl oligopeptidase family AA314_08822 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AA314_08825 PF13180 PDZ domain AA314_08825 PF17820 PDZ domain AA314_08835 PF00834 Ribulose-phosphate 3 epimerase family AA314_08837 PF00224 Pyruvate kinase, barrel domain AA314_08837 PF02887 Pyruvate kinase, alpha/beta domain AA314_08842 PF01207 Dihydrouridine synthase (Dus) AA314_08845 PF04545 Sigma-70, region 4 AA314_08845 PF04542 Sigma-70 region 2 AA314_08849 PF00578 AhpC/TSA family AA314_08850 PF00654 Voltage gated chloride channel AA314_08851 PF00990 Diguanylate cyclase, GGDEF domain AA314_08851 PF08447 PAS fold AA314_08851 PF00563 EAL domain AA314_08851 PF08448 PAS fold AA314_08858 PF00182 Chitinase class I AA314_08863 PF03793 PASTA domain AA314_08863 PF00069 Protein kinase domain AA314_08870 PF01979 Amidohydrolase family AA314_08875 PF04794 YdjC-like protein AA314_08876 PF00271 Helicase conserved C-terminal domain AA314_08876 PF12419 SNF2 Helicase protein AA314_08876 PF00176 SNF2 family N-terminal domain AA314_08880 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AA314_08880 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AA314_08882 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_08882 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AA314_08884 PF00310 Glutamine amidotransferases class-II AA314_08884 PF01493 GXGXG motif AA314_08884 PF01645 Conserved region in glutamate synthase AA314_08884 PF04898 Glutamate synthase central domain AA314_08885 PF00989 PAS fold AA314_08885 PF00512 His Kinase A (phospho-acceptor) domain AA314_08885 PF00672 HAMP domain AA314_08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08886 PF14489 QueF-like protein AA314_08888 PF03793 PASTA domain AA314_08888 PF00069 Protein kinase domain AA314_08890 PF13091 PLD-like domain AA314_08891 PF00072 Response regulator receiver domain AA314_08891 PF00486 Transcriptional regulatory protein, C terminal AA314_08893 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08893 PF00512 His Kinase A (phospho-acceptor) domain AA314_08895 PF02503 Polyphosphate kinase middle domain AA314_08895 PF13089 Polyphosphate kinase N-terminal domain AA314_08895 PF13090 Polyphosphate kinase C-terminal domain 2 AA314_08895 PF17941 Polyphosphate kinase C-terminal domain 1 AA314_08896 PF02541 Ppx/GppA phosphatase family AA314_08897 PF08240 Alcohol dehydrogenase GroES-like domain AA314_08897 PF13823 Alcohol dehydrogenase GroES-associated AA314_08897 PF00107 Zinc-binding dehydrogenase AA314_08901 PF02547 Queuosine biosynthesis protein AA314_08902 PF00106 short chain dehydrogenase AA314_08905 PF06672 Protein of unknown function (DUF1175) AA314_08906 PF00207 Alpha-2-macroglobulin family AA314_08906 PF07703 Alpha-2-macroglobulin bait region domain AA314_08906 PF01835 MG2 domain AA314_08907 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) AA314_08908 PF08486 Stage II sporulation protein AA314_08915 PF13419 Haloacid dehalogenase-like hydrolase AA314_08917 PF01966 HD domain AA314_08917 PF00072 Response regulator receiver domain AA314_08919 PF18324 Hypothetical protein TT1725 AA314_08919 PF00180 Isocitrate/isopropylmalate dehydrogenase AA314_08922 PF00183 Hsp90 protein AA314_08923 PF01253 Translation initiation factor SUI1 AA314_08924 PF13462 Thioredoxin AA314_08926 PF08669 Glycine cleavage T-protein C-terminal barrel domain AA314_08926 PF01571 Aminomethyltransferase folate-binding domain AA314_08928 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA314_08929 PF02798 Glutathione S-transferase, N-terminal domain AA314_08929 PF14497 Glutathione S-transferase, C-terminal domain AA314_08935 PF00486 Transcriptional regulatory protein, C terminal AA314_08935 PF00072 Response regulator receiver domain AA314_08936 PF00672 HAMP domain AA314_08936 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_08936 PF00512 His Kinase A (phospho-acceptor) domain AA314_08938 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA314_08939 PF00005 ABC transporter AA314_08940 PF00005 ABC transporter AA314_08940 PF02687 FtsX-like permease family AA314_08940 PF12704 MacB-like periplasmic core domain AA314_08943 PF00083 Sugar (and other) transporter AA314_08947 PF10503 Esterase PHB depolymerase AA314_08951 PF00069 Protein kinase domain AA314_08951 PF03793 PASTA domain AA314_08954 PF00326 Prolyl oligopeptidase family AA314_08962 PF01842 ACT domain AA314_08962 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA314_08962 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA314_08964 PF01565 FAD binding domain AA314_08964 PF02913 FAD linked oxidases, C-terminal domain AA314_08983 PF00571 CBS domain AA314_08983 PF00478 IMP dehydrogenase / GMP reductase domain AA314_08984 PF00793 DAHP synthetase I family AA314_08985 PF08546 Ketopantoate reductase PanE/ApbA C terminal AA314_08985 PF02558 Ketopantoate reductase PanE/ApbA AA314_08990 PF00005 ABC transporter AA314_08990 PF13732 Domain of unknown function (DUF4162) AA314_08992 PF18029 Glyoxalase-like domain AA314_08994 PF01464 Transglycosylase SLT domain AA314_08996 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AA314_08997 PF00365 Phosphofructokinase AA314_08998 PF02625 XdhC and CoxI family AA314_08998 PF13478 XdhC Rossmann domain AA314_09001 PF13676 TIR domain AA314_09002 PF01263 Aldose 1-epimerase AA314_09005 PF06508 Queuosine biosynthesis protein QueC AA314_09012 PF00069 Protein kinase domain AA314_09012 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09015 PF00512 His Kinase A (phospho-acceptor) domain AA314_09015 PF02743 Cache domain AA314_09016 PF00672 HAMP domain AA314_09016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09016 PF08448 PAS fold AA314_09016 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AA314_09016 PF00512 His Kinase A (phospho-acceptor) domain AA314_09020 PF00534 Glycosyl transferases group 1 AA314_09020 PF13439 Glycosyltransferase Family 4 AA314_09024 PF00067 Cytochrome P450 AA314_09026 PF02911 Formyl transferase, C-terminal domain AA314_09026 PF00551 Formyl transferase AA314_09027 PF00696 Amino acid kinase family AA314_09029 PF00696 Amino acid kinase family AA314_09030 PF01118 Semialdehyde dehydrogenase, NAD binding domain AA314_09030 PF02774 Semialdehyde dehydrogenase, dimerisation domain AA314_09031 PF00583 Acetyltransferase (GNAT) family AA314_09033 PF00248 Aldo/keto reductase family AA314_09036 PF10576 Iron-sulfur binding domain of endonuclease III AA314_09036 PF00633 Helix-hairpin-helix motif AA314_09036 PF00730 HhH-GPD superfamily base excision DNA repair protein AA314_09037 PF13396 Phospholipase_D-nuclease N-terminal AA314_09037 PF13091 PLD-like domain AA314_09039 PF01435 Peptidase family M48 AA314_09039 PF13181 Tetratricopeptide repeat AA314_09042 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA314_09047 PF00012 Hsp70 protein AA314_09050 PF00501 AMP-binding enzyme AA314_09052 PF10502 Signal peptidase, peptidase S26 AA314_09055 PF00149 Calcineurin-like phosphoesterase AA314_09055 PF02872 5'-nucleotidase, C-terminal domain AA314_09055 PF17936 Bacterial Ig domain AA314_09056 PF00561 alpha/beta hydrolase fold AA314_09058 PF00574 Clp protease AA314_09063 PF14031 Putative serine dehydratase domain AA314_09063 PF01168 Alanine racemase, N-terminal domain AA314_09066 PF07470 Glycosyl Hydrolase Family 88 AA314_09069 PF00512 His Kinase A (phospho-acceptor) domain AA314_09069 PF08448 PAS fold AA314_09069 PF13426 PAS domain AA314_09069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09069 PF00072 Response regulator receiver domain AA314_09070 PF00206 Lyase AA314_09070 PF10415 Fumarase C C-terminus AA314_09075 PF01274 Malate synthase AA314_09077 PF00463 Isocitrate lyase family AA314_09078 PF13514 AAA domain AA314_09079 PF00149 Calcineurin-like phosphoesterase AA314_09082 PF04101 Glycosyltransferase family 28 C-terminal domain AA314_09083 PF00919 Uncharacterized protein family UPF0004 AA314_09083 PF04055 Radical SAM superfamily AA314_09085 PF03167 Uracil DNA glycosylase superfamily AA314_09093 PF13426 PAS domain AA314_09093 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09093 PF08447 PAS fold AA314_09096 PF04055 Radical SAM superfamily AA314_09098 PF04542 Sigma-70 region 2 AA314_09098 PF08281 Sigma-70, region 4 AA314_09099 PF02245 Methylpurine-DNA glycosylase (MPG) AA314_09100 PF02446 4-alpha-glucanotransferase AA314_09103 PF01103 Surface antigen AA314_09103 PF07244 Surface antigen variable number repeat AA314_09110 PF00072 Response regulator receiver domain AA314_09111 PF00067 Cytochrome P450 AA314_09123 PF01882 Protein of unknown function DUF58 AA314_09125 PF00005 ABC transporter AA314_09127 PF17863 AAA lid domain AA314_09127 PF07726 ATPase family associated with various cellular activities (AAA) AA314_09129 PF13360 PQQ-like domain AA314_09129 PF01011 PQQ enzyme repeat AA314_09132 PF07715 TonB-dependent Receptor Plug Domain AA314_09132 PF00593 TonB dependent receptor AA314_09135 PF00012 Hsp70 protein AA314_09136 PF04151 Bacterial pre-peptidase C-terminal domain AA314_09136 PF04389 Peptidase family M28 AA314_09139 PF07238 PilZ domain AA314_09139 PF00069 Protein kinase domain AA314_09142 PF02868 Thermolysin metallopeptidase, alpha-helical domain AA314_09142 PF01447 Thermolysin metallopeptidase, catalytic domain AA314_09142 PF03413 Peptidase propeptide and YPEB domain AA314_09142 PF07504 Fungalysin/Thermolysin Propeptide Motif AA314_09143 PF01618 MotA/TolQ/ExbB proton channel family AA314_09144 PF02472 Biopolymer transport protein ExbD/TolR AA314_09159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09159 PF00512 His Kinase A (phospho-acceptor) domain AA314_09159 PF07689 KaiB domain AA314_09170 PF00691 OmpA family AA314_09170 PF13488 Glycine zipper AA314_09172 PF00480 ROK family AA314_09173 PF03358 NADPH-dependent FMN reductase AA314_09174 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AA314_09174 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AA314_09174 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AA314_09174 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AA314_09176 PF00069 Protein kinase domain AA314_09176 PF03793 PASTA domain AA314_09183 PF07238 PilZ domain AA314_09183 PF00069 Protein kinase domain AA314_09185 PF01050 Mannose-6-phosphate isomerase AA314_09185 PF00483 Nucleotidyl transferase AA314_09188 PF03062 MBOAT, membrane-bound O-acyltransferase family AA314_09189 PF00069 Protein kinase domain AA314_09189 PF07238 PilZ domain AA314_09192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09192 PF00072 Response regulator receiver domain AA314_09192 PF13188 PAS domain AA314_09192 PF08448 PAS fold AA314_09192 PF00512 His Kinase A (phospho-acceptor) domain AA314_09193 PF00072 Response regulator receiver domain AA314_09193 PF00158 Sigma-54 interaction domain AA314_09193 PF02954 Bacterial regulatory protein, Fis family AA314_09195 PF02673 Bacitracin resistance protein BacA AA314_09196 PF02810 SEC-C motif AA314_09197 PF13180 PDZ domain AA314_09199 PF00593 TonB dependent receptor AA314_09200 PF00232 Glycosyl hydrolase family 1 AA314_09205 PF00905 Penicillin binding protein transpeptidase domain AA314_09207 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_09207 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA314_09208 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AA314_09208 PF05221 S-adenosyl-L-homocysteine hydrolase AA314_09209 PF02773 S-adenosylmethionine synthetase, C-terminal domain AA314_09209 PF02772 S-adenosylmethionine synthetase, central domain AA314_09209 PF00438 S-adenosylmethionine synthetase, N-terminal domain AA314_09214 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AA314_09214 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AA314_09215 PF00282 Pyridoxal-dependent decarboxylase conserved domain AA314_09217 PF00072 Response regulator receiver domain AA314_09217 PF00486 Transcriptional regulatory protein, C terminal AA314_09219 PF01384 Phosphate transporter family AA314_09220 PF01384 Phosphate transporter family AA314_09225 PF02308 MgtC family AA314_09226 PF05524 PEP-utilising enzyme, N-terminal AA314_09226 PF00391 PEP-utilising enzyme, mobile domain AA314_09226 PF02896 PEP-utilising enzyme, TIM barrel domain AA314_09227 PF00381 PTS HPr component phosphorylation site AA314_09228 PF03613 PTS system mannose/fructose/sorbose family IID component AA314_09230 PF03830 PTS system sorbose subfamily IIB component AA314_09231 PF03610 PTS system fructose IIA component AA314_09232 PF03668 P-loop ATPase protein family AA314_09233 PF02603 HPr Serine kinase N terminus AA314_09233 PF07475 HPr Serine kinase C-terminal domain AA314_09235 PF01230 HIT domain AA314_09238 PF00654 Voltage gated chloride channel AA314_09240 PF00005 ABC transporter AA314_09241 PF00069 Protein kinase domain AA314_09241 PF08308 PEGA domain AA314_09243 PF00355 Rieske [2Fe-2S] domain AA314_09250 PF01032 FecCD transport family AA314_09251 PF01497 Periplasmic binding protein AA314_09254 PF00593 TonB dependent receptor AA314_09254 PF07715 TonB-dependent Receptor Plug Domain AA314_09257 PF10531 SLBB domain AA314_09258 PF00069 Protein kinase domain AA314_09258 PF08308 PEGA domain AA314_09260 PF02654 Cobalamin-5-phosphate synthase AA314_09263 PF00528 Binding-protein-dependent transport system inner membrane component AA314_09264 PF00528 Binding-protein-dependent transport system inner membrane component AA314_09265 PF00005 ABC transporter AA314_09265 PF03459 TOBE domain AA314_09266 PF12823 Domain of unknown function (DUF3817) AA314_09267 PF01047 MarR family AA314_09271 PF00067 Cytochrome P450 AA314_09272 PF01757 Acyltransferase family AA314_09273 PF16347 Domain of unknown function (DUF4976) AA314_09273 PF00884 Sulfatase AA314_09276 PF00709 Adenylosuccinate synthetase AA314_09277 PF00291 Pyridoxal-phosphate dependent enzyme AA314_09281 PF00082 Subtilase family AA314_09282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09282 PF00672 HAMP domain AA314_09282 PF01627 Hpt domain AA314_09282 PF00072 Response regulator receiver domain AA314_09282 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_09282 PF00512 His Kinase A (phospho-acceptor) domain AA314_09284 PF00012 Hsp70 protein AA314_09286 PF17863 AAA lid domain AA314_09286 PF07726 ATPase family associated with various cellular activities (AAA) AA314_09289 PF00486 Transcriptional regulatory protein, C terminal AA314_09289 PF00072 Response regulator receiver domain AA314_09292 PF00933 Glycosyl hydrolase family 3 N terminal domain AA314_09292 PF01915 Glycosyl hydrolase family 3 C-terminal domain AA314_09296 PF00578 AhpC/TSA family AA314_09299 PF00072 Response regulator receiver domain AA314_09299 PF00486 Transcriptional regulatory protein, C terminal AA314_09301 PF00891 O-methyltransferase domain AA314_09302 PF01040 UbiA prenyltransferase family AA314_09303 PF00106 short chain dehydrogenase AA314_09304 PF00672 HAMP domain AA314_09304 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09306 PF02797 Chalcone and stilbene synthases, C-terminal domain AA314_09306 PF00195 Chalcone and stilbene synthases, N-terminal domain AA314_09308 PF00501 AMP-binding enzyme AA314_09316 PF01494 FAD binding domain AA314_09317 PF00501 AMP-binding enzyme AA314_09319 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AA314_09320 PF02797 Chalcone and stilbene synthases, C-terminal domain AA314_09320 PF00195 Chalcone and stilbene synthases, N-terminal domain AA314_09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09330 PF13188 PAS domain AA314_09330 PF13426 PAS domain AA314_09331 PF00158 Sigma-54 interaction domain AA314_09331 PF00072 Response regulator receiver domain AA314_09331 PF02954 Bacterial regulatory protein, Fis family AA314_09332 PF00916 Sulfate permease family AA314_09332 PF01740 STAS domain AA314_09333 PF00484 Carbonic anhydrase AA314_09336 PF00582 Universal stress protein family AA314_09346 PF00067 Cytochrome P450 AA314_09347 PF00723 Glycosyl hydrolases family 15 AA314_09351 PF00512 His Kinase A (phospho-acceptor) domain AA314_09351 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA314_09351 PF01627 Hpt domain AA314_09351 PF00072 Response regulator receiver domain AA314_09351 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09351 PF00672 HAMP domain AA314_09352 PF00072 Response regulator receiver domain AA314_09352 PF00486 Transcriptional regulatory protein, C terminal AA314_09361 PF03552 Cellulose synthase AA314_09361 PF00535 Glycosyl transferase family 2 AA314_09361 PF07238 PilZ domain AA314_09364 PF07963 Prokaryotic N-terminal methylation motif AA314_09364 PF00114 Pilin (bacterial filament) AA314_09369 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AA314_09369 PF09180 Prolyl-tRNA synthetase, C-terminal AA314_09369 PF03129 Anticodon binding domain AA314_09374 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_09375 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_09384 PF00005 ABC transporter AA314_09385 PF12399 Branched-chain amino acid ATP-binding cassette transporter AA314_09385 PF00005 ABC transporter AA314_09386 PF02653 Branched-chain amino acid transport system / permease component AA314_09386 PF11862 Domain of unknown function (DUF3382) AA314_09387 PF02653 Branched-chain amino acid transport system / permease component AA314_09388 PF13458 Periplasmic binding protein AA314_09390 PF00069 Protein kinase domain AA314_09391 PF00012 Hsp70 protein AA314_09392 PF01025 GrpE AA314_09401 PF01494 FAD binding domain AA314_09402 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AA314_09402 PF13378 Enolase C-terminal domain-like AA314_09404 PF00005 ABC transporter AA314_09408 PF01969 Protein of unknown function DUF111 AA314_09409 PF00731 AIR carboxylase AA314_09410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA314_09410 PF11852 Domain of unknown function (DUF3372) AA314_09410 PF03714 Bacterial pullanase-associated domain AA314_09410 PF18494 Pullulanase Ins domain AA314_09410 PF17967 Pullulanase N2 domain AA314_09411 PF00128 Alpha amylase, catalytic domain AA314_09415 PF00528 Binding-protein-dependent transport system inner membrane component AA314_09416 PF00528 Binding-protein-dependent transport system inner membrane component AA314_09417 PF01547 Bacterial extracellular solute-binding protein AA314_09418 PF17912 MalK OB fold domain AA314_09418 PF00005 ABC transporter AA314_09419 PF16657 Maltogenic Amylase, C-terminal domain AA314_09419 PF00128 Alpha amylase, catalytic domain AA314_09419 PF02903 Alpha amylase, N-terminal ig-like domain AA314_09423 PF07194 P2 response regulator binding domain AA314_09423 PF01627 Hpt domain AA314_09423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09423 PF02895 Signal transducing histidine kinase, homodimeric domain AA314_09423 PF01584 CheW-like domain AA314_09424 PF00072 Response regulator receiver domain AA314_09425 PF01584 CheW-like domain AA314_09426 PF13426 PAS domain AA314_09426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09426 PF08447 PAS fold AA314_09427 PF02769 AIR synthase related protein, C-terminal domain AA314_09427 PF00586 AIR synthase related protein, N-terminal domain AA314_09430 PF00512 His Kinase A (phospho-acceptor) domain AA314_09430 PF16736 Single Cache-like AA314_09430 PF00989 PAS fold AA314_09430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09431 PF00025 ADP-ribosylation factor family AA314_09433 PF00437 Type II/IV secretion system protein AA314_09434 PF00437 Type II/IV secretion system protein AA314_09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09435 PF00512 His Kinase A (phospho-acceptor) domain AA314_09436 PF06733 DEAD_2 AA314_09436 PF13307 Helicase C-terminal domain AA314_09438 PF00691 OmpA family AA314_09438 PF05736 OprF membrane domain AA314_09439 PF00072 Response regulator receiver domain AA314_09440 PF00512 His Kinase A (phospho-acceptor) domain AA314_09440 PF08448 PAS fold AA314_09440 PF13188 PAS domain AA314_09440 PF00072 Response regulator receiver domain AA314_09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09445 PF13419 Haloacid dehalogenase-like hydrolase AA314_09448 PF00781 Diacylglycerol kinase catalytic domain AA314_09449 PF02163 Peptidase family M50 AA314_09449 PF13180 PDZ domain AA314_09449 PF17820 PDZ domain AA314_09450 PF00561 alpha/beta hydrolase fold AA314_09454 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AA314_09454 PF01628 HrcA protein C terminal domain AA314_09459 PF00892 EamA-like transporter family AA314_09460 PF03951 Glutamine synthetase, beta-Grasp domain AA314_09460 PF00120 Glutamine synthetase, catalytic domain AA314_09467 PF07995 Glucose / Sorbosone dehydrogenase AA314_09469 PF00999 Sodium/hydrogen exchanger family AA314_09470 PF07885 Ion channel AA314_09470 PF00027 Cyclic nucleotide-binding domain AA314_09475 PF00999 Sodium/hydrogen exchanger family AA314_09475 PF02254 TrkA-N domain AA314_09482 PF08281 Sigma-70, region 4 AA314_09482 PF04542 Sigma-70 region 2 AA314_09485 PF00005 ABC transporter AA314_09486 PF00893 Small Multidrug Resistance protein AA314_09489 PF01218 Coproporphyrinogen III oxidase AA314_09493 PF00072 Response regulator receiver domain AA314_09493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09493 PF00672 HAMP domain AA314_09493 PF00512 His Kinase A (phospho-acceptor) domain AA314_09493 PF17149 Periplasmic sensor domain found in signal transduction proteins AA314_09493 PF01627 Hpt domain AA314_09494 PF00005 ABC transporter AA314_09499 PF16123 Hydroxyacylglutathione hydrolase C-terminus AA314_09499 PF00753 Metallo-beta-lactamase superfamily AA314_09503 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AA314_09503 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AA314_09504 PF01329 Pterin 4 alpha carbinolamine dehydratase AA314_09506 PF00892 EamA-like transporter family AA314_09511 PF01546 Peptidase family M20/M25/M40 AA314_09511 PF07687 Peptidase dimerisation domain AA314_09513 PF00132 Bacterial transferase hexapeptide (six repeats) AA314_09513 PF14602 Hexapeptide repeat of succinyl-transferase AA314_09513 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AA314_09518 PF00282 Pyridoxal-dependent decarboxylase conserved domain AA314_09520 PF00535 Glycosyl transferase family 2 AA314_09524 PF12704 MacB-like periplasmic core domain AA314_09524 PF00005 ABC transporter AA314_09526 PF00005 ABC transporter AA314_09536 PF05962 HutD AA314_09539 PF11838 ERAP1-like C-terminal domain AA314_09539 PF01433 Peptidase family M1 domain AA314_09544 PF00069 Protein kinase domain AA314_09544 PF08308 PEGA domain AA314_09551 PF00501 AMP-binding enzyme AA314_09552 PF00664 ABC transporter transmembrane region AA314_09552 PF00005 ABC transporter AA314_09553 PF00664 ABC transporter transmembrane region AA314_09553 PF00005 ABC transporter AA314_09557 PF12679 ABC-2 family transporter protein AA314_09558 PF00005 ABC transporter AA314_09561 PF02261 Aspartate decarboxylase AA314_09565 PF01590 GAF domain AA314_09565 PF00158 Sigma-54 interaction domain AA314_09568 PF02954 Bacterial regulatory protein, Fis family AA314_09568 PF00072 Response regulator receiver domain AA314_09568 PF00158 Sigma-54 interaction domain AA314_09576 PF13419 Haloacid dehalogenase-like hydrolase AA314_09577 PF00085 Thioredoxin AA314_09578 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AA314_09578 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_09582 PF00795 Carbon-nitrogen hydrolase AA314_09582 PF02540 NAD synthase AA314_09583 PF00004 ATPase family associated with various cellular activities (AAA) AA314_09583 PF05362 Lon protease (S16) C-terminal proteolytic domain AA314_09583 PF02190 ATP-dependent protease La (LON) substrate-binding domain AA314_09585 PF13188 PAS domain AA314_09585 PF08448 PAS fold AA314_09585 PF00512 His Kinase A (phospho-acceptor) domain AA314_09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09585 PF00072 Response regulator receiver domain AA314_09587 PF13419 Haloacid dehalogenase-like hydrolase AA314_09593 PF00989 PAS fold AA314_09593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09593 PF00512 His Kinase A (phospho-acceptor) domain AA314_09594 PF00512 His Kinase A (phospho-acceptor) domain AA314_09594 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09597 PF16123 Hydroxyacylglutathione hydrolase C-terminus AA314_09597 PF00753 Metallo-beta-lactamase superfamily AA314_09601 PF00196 Bacterial regulatory proteins, luxR family AA314_09601 PF00072 Response regulator receiver domain AA314_09606 PF00158 Sigma-54 interaction domain AA314_09606 PF00072 Response regulator receiver domain AA314_09606 PF02954 Bacterial regulatory protein, Fis family AA314_09607 PF03793 PASTA domain AA314_09607 PF00069 Protein kinase domain AA314_09609 PF01926 50S ribosome-binding GTPase AA314_09609 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AA314_09612 PF01389 OmpA-like transmembrane domain AA314_09612 PF00691 OmpA family AA314_09620 PF00593 TonB dependent receptor AA314_09623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09623 PF13426 PAS domain AA314_09623 PF00512 His Kinase A (phospho-acceptor) domain AA314_09623 PF00672 HAMP domain AA314_09624 PF02954 Bacterial regulatory protein, Fis family AA314_09624 PF00158 Sigma-54 interaction domain AA314_09624 PF00072 Response regulator receiver domain AA314_09627 PF00072 Response regulator receiver domain AA314_09627 PF01339 CheB methylesterase AA314_09628 PF01739 CheR methyltransferase, SAM binding domain AA314_09628 PF03705 CheR methyltransferase, all-alpha domain AA314_09629 PF00672 HAMP domain AA314_09629 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09629 PF02203 Tar ligand binding domain homologue AA314_09630 PF01584 CheW-like domain AA314_09631 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09631 PF00672 HAMP domain AA314_09631 PF12729 Four helix bundle sensory module for signal transduction AA314_09632 PF01584 CheW-like domain AA314_09632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09632 PF09078 CheY binding AA314_09632 PF01627 Hpt domain AA314_09632 PF02895 Signal transducing histidine kinase, homodimeric domain AA314_09633 PF01584 CheW-like domain AA314_09634 PF02203 Tar ligand binding domain homologue AA314_09634 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09634 PF00672 HAMP domain AA314_09635 PF02954 Bacterial regulatory protein, Fis family AA314_09635 PF00072 Response regulator receiver domain AA314_09635 PF00158 Sigma-54 interaction domain AA314_09636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09636 PF00512 His Kinase A (phospho-acceptor) domain AA314_09637 PF00999 Sodium/hydrogen exchanger family AA314_09637 PF02254 TrkA-N domain AA314_09638 PF02080 TrkA-C domain AA314_09638 PF03471 Transporter associated domain AA314_09638 PF00999 Sodium/hydrogen exchanger family AA314_09641 PF01926 50S ribosome-binding GTPase AA314_09641 PF10396 GTP-binding protein TrmE N-terminus AA314_09641 PF12631 MnmE helical domain AA314_09645 PF01551 Peptidase family M23 AA314_09645 PF08460 Bacterial SH3 domain AA314_09646 PF01979 Amidohydrolase family AA314_09648 PF00326 Prolyl oligopeptidase family AA314_09648 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AA314_09653 PF00501 AMP-binding enzyme AA314_09654 PF00501 AMP-binding enzyme AA314_09660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA314_09660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA314_09662 PF01230 HIT domain AA314_09664 PF00501 AMP-binding enzyme AA314_09670 PF03781 Sulfatase-modifying factor enzyme 1 AA314_09672 PF03793 PASTA domain AA314_09672 PF00069 Protein kinase domain AA314_09674 PF01654 Cytochrome bd terminal oxidase subunit I AA314_09677 PF03747 ADP-ribosylglycohydrolase AA314_09679 PF02082 Transcriptional regulator AA314_09680 PF00970 Oxidoreductase FAD-binding domain AA314_09680 PF00175 Oxidoreductase NAD-binding domain AA314_09681 PF01152 Bacterial-like globin AA314_09682 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AA314_09684 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA314_09684 PF02874 ATP synthase alpha/beta family, beta-barrel domain AA314_09685 PF00231 ATP synthase AA314_09686 PF00072 Response regulator receiver domain AA314_09686 PF00486 Transcriptional regulatory protein, C terminal AA314_09688 PF02698 DUF218 domain AA314_09690 PF01594 AI-2E family transporter AA314_09694 PF00085 Thioredoxin AA314_09696 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AA314_09696 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AA314_09698 PF01432 Peptidase family M3 AA314_09705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AA314_09706 PF01066 CDP-alcohol phosphatidyltransferase AA314_09708 PF00092 von Willebrand factor type A domain AA314_09708 PF12450 von Willebrand factor AA314_09708 PF12034 Domain of unknown function (DUF3520) AA314_09713 PF00300 Histidine phosphatase superfamily (branch 1) AA314_09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09720 PF01590 GAF domain AA314_09720 PF00512 His Kinase A (phospho-acceptor) domain AA314_09720 PF08446 PAS fold AA314_09720 PF00360 Phytochrome region AA314_09721 PF04228 Putative neutral zinc metallopeptidase AA314_09722 PF09297 NADH pyrophosphatase zinc ribbon domain AA314_09722 PF00293 NUDIX domain AA314_09723 PF13520 Amino acid permease AA314_09725 PF00005 ABC transporter AA314_09735 PF01593 Flavin containing amine oxidoreductase AA314_09736 PF01590 GAF domain AA314_09736 PF00360 Phytochrome region AA314_09736 PF08446 PAS fold AA314_09736 PF00512 His Kinase A (phospho-acceptor) domain AA314_09736 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09739 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09739 PF00512 His Kinase A (phospho-acceptor) domain AA314_09740 PF01584 CheW-like domain AA314_09741 PF01739 CheR methyltransferase, SAM binding domain AA314_09744 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09744 PF00672 HAMP domain AA314_09744 PF02743 Cache domain AA314_09745 PF01584 CheW-like domain AA314_09745 PF01627 Hpt domain AA314_09745 PF00072 Response regulator receiver domain AA314_09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09746 PF01339 CheB methylesterase AA314_09746 PF00072 Response regulator receiver domain AA314_09747 PF00512 His Kinase A (phospho-acceptor) domain AA314_09747 PF18698 Histidine kinase sensor domain AA314_09747 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09747 PF00672 HAMP domain AA314_09747 PF00989 PAS fold AA314_09752 PF03705 CheR methyltransferase, all-alpha domain AA314_09752 PF01739 CheR methyltransferase, SAM binding domain AA314_09753 PF01584 CheW-like domain AA314_09754 PF02203 Tar ligand binding domain homologue AA314_09754 PF00672 HAMP domain AA314_09754 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA314_09755 PF00672 HAMP domain AA314_09755 PF02203 Tar ligand binding domain homologue AA314_09756 PF01627 Hpt domain AA314_09756 PF02895 Signal transducing histidine kinase, homodimeric domain AA314_09756 PF01584 CheW-like domain AA314_09756 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09757 PF01627 Hpt domain AA314_09757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09757 PF01584 CheW-like domain AA314_09757 PF09078 CheY binding AA314_09757 PF02895 Signal transducing histidine kinase, homodimeric domain AA314_09759 PF00486 Transcriptional regulatory protein, C terminal AA314_09759 PF00072 Response regulator receiver domain AA314_09761 PF03091 CutA1 divalent ion tolerance protein AA314_09763 PF00326 Prolyl oligopeptidase family AA314_09765 PF03741 Integral membrane protein TerC family AA314_09766 PF10431 C-terminal, D2-small domain, of ClpB protein AA314_09766 PF07724 AAA domain (Cdc48 subfamily) AA314_09766 PF17871 AAA lid domain AA314_09766 PF00004 ATPase family associated with various cellular activities (AAA) AA314_09766 PF02861 Clp amino terminal domain, pathogenicity island component AA314_09775 PF00672 HAMP domain AA314_09775 PF00512 His Kinase A (phospho-acceptor) domain AA314_09775 PF18698 Histidine kinase sensor domain AA314_09775 PF00989 PAS fold AA314_09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09776 PF04754 Putative transposase, YhgA-like AA314_09779 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA314_09779 PF01627 Hpt domain AA314_09779 PF00072 Response regulator receiver domain AA314_09779 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09779 PF00512 His Kinase A (phospho-acceptor) domain AA314_09792 PF01554 MatE AA314_09796 PF08308 PEGA domain AA314_09796 PF00069 Protein kinase domain AA314_09800 PF00012 Hsp70 protein AA314_09801 PF00213 ATP synthase delta (OSCP) subunit AA314_09802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09802 PF00512 His Kinase A (phospho-acceptor) domain AA314_09802 PF16750 Sensor domain of 2-component histidine kinase AA314_09802 PF00672 HAMP domain AA314_09803 PF02874 ATP synthase alpha/beta family, beta-barrel domain AA314_09803 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA314_09803 PF00306 ATP synthase alpha/beta chain, C terminal domain AA314_09808 PF00072 Response regulator receiver domain AA314_09808 PF00512 His Kinase A (phospho-acceptor) domain AA314_09808 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09808 PF01627 Hpt domain AA314_09809 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09809 PF00512 His Kinase A (phospho-acceptor) domain AA314_09809 PF00672 HAMP domain AA314_09811 PF08359 YsiA-like protein, C-terminal region AA314_09811 PF00440 Bacterial regulatory proteins, tetR family AA314_09818 PF00561 alpha/beta hydrolase fold AA314_09824 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AA314_09825 PF02810 SEC-C motif AA314_09825 PF07517 SecA DEAD-like domain AA314_09825 PF01043 SecA preprotein cross-linking domain AA314_09825 PF07516 SecA Wing and Scaffold domain AA314_09826 PF11818 C-terminal domain of tail specific protease (DUF3340) AA314_09826 PF00595 PDZ domain AA314_09826 PF17804 Tail specific protease N-terminal domain AA314_09826 PF03572 Peptidase family S41 AA314_09827 PF00067 Cytochrome P450 AA314_09829 PF13649 Methyltransferase domain AA314_09848 PF02423 Ornithine cyclodeaminase/mu-crystallin family AA314_09849 PF00360 Phytochrome region AA314_09849 PF08446 PAS fold AA314_09849 PF00512 His Kinase A (phospho-acceptor) domain AA314_09849 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09849 PF01590 GAF domain AA314_09851 PF01474 Class-II DAHP synthetase family AA314_09854 PF01546 Peptidase family M20/M25/M40 AA314_09863 PF12706 Beta-lactamase superfamily domain AA314_09865 PF00557 Metallopeptidase family M24 AA314_09882 PF01739 CheR methyltransferase, SAM binding domain AA314_09882 PF03705 CheR methyltransferase, all-alpha domain AA314_09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_09890 PF03466 LysR substrate binding domain AA314_09892 PF01476 LysM domain AA314_09892 PF05257 CHAP domain AA314_09893 PF00025 ADP-ribosylation factor family AA314_09894 PF18158 Adaptive response protein AidB N-terminal domain AA314_09894 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_09894 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_09899 PF03466 LysR substrate binding domain AA314_09899 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA314_09901 PF00593 TonB dependent receptor AA314_09901 PF07715 TonB-dependent Receptor Plug Domain AA314_09903 PF06983 3-demethylubiquinone-9 3-methyltransferase AA314_09904 PF00491 Arginase family AA314_09907 PF13676 TIR domain AA314_09908 PF01738 Dienelactone hydrolase family AA314_09909 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AA314_09909 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA314_09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09910 PF00672 HAMP domain AA314_09910 PF13426 PAS domain AA314_09910 PF00512 His Kinase A (phospho-acceptor) domain AA314_09911 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09911 PF01627 Hpt domain AA314_09911 PF00072 Response regulator receiver domain AA314_09911 PF17149 Periplasmic sensor domain found in signal transduction proteins AA314_09911 PF00672 HAMP domain AA314_09911 PF00512 His Kinase A (phospho-acceptor) domain AA314_09912 PF00512 His Kinase A (phospho-acceptor) domain AA314_09912 PF08446 PAS fold AA314_09912 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09912 PF01590 GAF domain AA314_09912 PF00360 Phytochrome region AA314_09920 PF00512 His Kinase A (phospho-acceptor) domain AA314_09920 PF08448 PAS fold AA314_09920 PF13426 PAS domain AA314_09920 PF00072 Response regulator receiver domain AA314_09920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09921 PF00989 PAS fold AA314_09921 PF00512 His Kinase A (phospho-acceptor) domain AA314_09921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09923 PF00083 Sugar (and other) transporter AA314_09925 PF00355 Rieske [2Fe-2S] domain AA314_09937 PF02464 Competence-damaged protein AA314_09940 PF00501 AMP-binding enzyme AA314_09940 PF13193 AMP-binding enzyme C-terminal domain AA314_09941 PF06745 KaiC AA314_09943 PF00486 Transcriptional regulatory protein, C terminal AA314_09943 PF00072 Response regulator receiver domain AA314_09944 PF00929 Exonuclease AA314_09945 PF00156 Phosphoribosyl transferase domain AA314_09945 PF01738 Dienelactone hydrolase family AA314_09946 PF00156 Phosphoribosyl transferase domain AA314_09946 PF05139 Erythromycin esterase AA314_09947 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AA314_09947 PF14572 Phosphoribosyl synthetase-associated domain AA314_09951 PF00378 Enoyl-CoA hydratase/isomerase AA314_09953 PF11838 ERAP1-like C-terminal domain AA314_09953 PF01433 Peptidase family M1 domain AA314_09954 PF03279 Bacterial lipid A biosynthesis acyltransferase AA314_09955 PF00149 Calcineurin-like phosphoesterase AA314_09956 PF00582 Universal stress protein family AA314_09957 PF00085 Thioredoxin AA314_09960 PF01112 Asparaginase AA314_09963 PF04972 BON domain AA314_09963 PF00691 OmpA family AA314_09968 PF00069 Protein kinase domain AA314_09968 PF13360 PQQ-like domain AA314_09970 PF02954 Bacterial regulatory protein, Fis family AA314_09970 PF00072 Response regulator receiver domain AA314_09970 PF00158 Sigma-54 interaction domain AA314_09973 PF00582 Universal stress protein family AA314_09975 PF00689 Cation transporting ATPase, C-terminus AA314_09975 PF00690 Cation transporter/ATPase, N-terminus AA314_09977 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09977 PF00512 His Kinase A (phospho-acceptor) domain AA314_09977 PF00989 PAS fold AA314_09977 PF16736 Single Cache-like AA314_09982 PF00293 NUDIX domain AA314_09982 PF01467 Cytidylyltransferase-like AA314_09983 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AA314_09983 PF12833 Helix-turn-helix domain AA314_09994 PF04402 Protein of unknown function (DUF541) AA314_09996 PF00970 Oxidoreductase FAD-binding domain AA314_09996 PF00111 2Fe-2S iron-sulfur cluster binding domain AA314_09996 PF00175 Oxidoreductase NAD-binding domain AA314_09997 PF00512 His Kinase A (phospho-acceptor) domain AA314_09997 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_09997 PF02743 Cache domain AA314_09998 PF02386 Cation transport protein AA314_10004 PF02146 Sir2 family AA314_10009 PF02146 Sir2 family AA314_10015 PF02810 SEC-C motif AA314_10015 PF07517 SecA DEAD-like domain AA314_10015 PF01043 SecA preprotein cross-linking domain AA314_10015 PF07516 SecA Wing and Scaffold domain AA314_10017 PF00072 Response regulator receiver domain AA314_10017 PF01339 CheB methylesterase AA314_10019 PF00437 Type II/IV secretion system protein AA314_10021 PF00034 Cytochrome c AA314_10021 PF03150 Di-haem cytochrome c peroxidase AA314_10023 PF02632 BioY family AA314_10024 PF02361 Cobalt transport protein AA314_10025 PF00005 ABC transporter AA314_10026 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA314_10030 PF02743 Cache domain AA314_10030 PF00512 His Kinase A (phospho-acceptor) domain AA314_10030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_10034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_10034 PF08448 PAS fold AA314_10034 PF13188 PAS domain AA314_10034 PF00512 His Kinase A (phospho-acceptor) domain AA314_10034 PF00072 Response regulator receiver domain AA314_10035 PF00043 Glutathione S-transferase, C-terminal domain AA314_10035 PF02798 Glutathione S-transferase, N-terminal domain AA314_10036 PF01425 Amidase AA314_10038 PF04151 Bacterial pre-peptidase C-terminal domain AA314_10038 PF09286 Pro-kumamolisin, activation domain AA314_10039 PF00158 Sigma-54 interaction domain AA314_10039 PF02830 V4R domain AA314_10039 PF06505 Activator of aromatic catabolism AA314_10039 PF02954 Bacterial regulatory protein, Fis family AA314_10041 PF00264 Common central domain of tyrosinase AA314_10043 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AA314_10045 PF00089 Trypsin AA314_10050 PF18331 PKHD-type hydroxylase C-terminal domain AA314_10050 PF13640 2OG-Fe(II) oxygenase superfamily AA314_10053 PF07715 TonB-dependent Receptor Plug Domain AA314_10053 PF00593 TonB dependent receptor AA314_10055 PF08402 TOBE domain AA314_10055 PF00005 ABC transporter AA314_10058 PF00069 Protein kinase domain AA314_10058 PF07238 PilZ domain AA314_10060 PF00069 Protein kinase domain AA314_10062 PF00072 Response regulator receiver domain AA314_10062 PF00158 Sigma-54 interaction domain AA314_10063 PF04231 Endonuclease I AA314_10069 PF00528 Binding-protein-dependent transport system inner membrane component AA314_10070 PF00528 Binding-protein-dependent transport system inner membrane component AA314_10071 PF01547 Bacterial extracellular solute-binding protein AA314_10072 PF10990 Protein of unknown function (DUF2809) AA314_10073 PF00313 'Cold-shock' DNA-binding domain AA314_10077 PF00486 Transcriptional regulatory protein, C terminal AA314_10077 PF00072 Response regulator receiver domain AA314_10078 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA314_10078 PF00512 His Kinase A (phospho-acceptor) domain AA314_10080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA314_10080 PF02770 Acyl-CoA dehydrogenase, middle domain AA314_10080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA314_10084 PF13191 AAA ATPase domain AA314_10084 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_10091 PF13191 AAA ATPase domain AA314_10091 PF00211 Adenylate and Guanylate cyclase catalytic domain AA314_10092 PF00072 Response regulator receiver domain AA314_10094 PF04542 Sigma-70 region 2 AA314_10094 PF08281 Sigma-70, region 4 AA314_10096 PF03707 Bacterial signalling protein N terminal repeat AA314_10096 PF00990 Diguanylate cyclase, GGDEF domain AA314_10096 PF00563 EAL domain AA314_10099 PF01593 Flavin containing amine oxidoreductase AA314_10102 PF07690 Major Facilitator Superfamily AA314_10104 PF00583 Acetyltransferase (GNAT) family AA314_10104 PF13380 CoA binding domain AA314_10104 PF13607 Succinyl-CoA ligase like flavodoxin domain AA314_10107 PF00144 Beta-lactamase AA314_10108 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AA314_10108 PF00400 WD domain, G-beta repeat AA314_10110 PF00384 Molybdopterin oxidoreductase AA314_10110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA314_10110 PF01568 Molydopterin dinucleotide binding domain AA314_10111 PF00384 Molybdopterin oxidoreductase AA314_10111 PF01568 Molydopterin dinucleotide binding domain AA314_10111 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA314_10112 PF01568 Molydopterin dinucleotide binding domain AA314_10112 PF00384 Molybdopterin oxidoreductase AA314_10112 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA314_10117 PF18029 Glyoxalase-like domain AA314_10117 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA314_10118 PF00933 Glycosyl hydrolase family 3 N terminal domain AA314_10121 PF02954 Bacterial regulatory protein, Fis family AA314_10121 PF00072 Response regulator receiver domain AA314_10121 PF00158 Sigma-54 interaction domain