locus-tag class description JQX13_00035 PF03527 RHS protein JQX13_00035 PF05593 RHS Repeat JQX13_00095 PF05593 RHS Repeat JQX13_00095 PF03527 RHS protein JQX13_00130 PF00158 Sigma-54 interaction domain JQX13_00130 PF00072 Response regulator receiver domain JQX13_00135 PF00512 His Kinase A (phospho-acceptor) domain JQX13_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_00135 PF00672 HAMP domain JQX13_00140 PF01740 STAS domain JQX13_00140 PF00916 Sulfate permease family JQX13_00160 PF00005 ABC transporter JQX13_00230 PF00550 Phosphopantetheine attachment site JQX13_00230 PF00668 Condensation domain JQX13_00230 PF13193 AMP-binding enzyme C-terminal domain JQX13_00230 PF00501 AMP-binding enzyme JQX13_00260 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_00260 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_00260 PF08659 KR domain JQX13_00260 PF00501 AMP-binding enzyme JQX13_00260 PF13193 AMP-binding enzyme C-terminal domain JQX13_00260 PF00668 Condensation domain JQX13_00260 PF00550 Phosphopantetheine attachment site JQX13_00260 PF14765 Polyketide synthase dehydratase JQX13_00260 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_00280 PF02527 rRNA small subunit methyltransferase G JQX13_00285 PF00266 Aminotransferase class-V JQX13_00300 PF13417 Glutathione S-transferase, N-terminal domain JQX13_00300 PF00043 Glutathione S-transferase, C-terminal domain JQX13_00310 PF14760 Rnk N-terminus JQX13_00310 PF01272 Transcription elongation factor, GreA/GreB, C-term JQX13_00315 PF00425 chorismate binding enzyme JQX13_00315 PF04715 Anthranilate synthase component I, N terminal region JQX13_00320 PF00117 Glutamine amidotransferase class-I JQX13_00330 PF01479 S4 domain JQX13_00330 PF00849 RNA pseudouridylate synthase JQX13_00385 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JQX13_00385 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JQX13_00390 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_00390 PF01799 [2Fe-2S] binding domain JQX13_00400 PF01594 AI-2E family transporter JQX13_00425 PF05506 Domain of unknown function (DUF756) JQX13_00425 PF04185 Phosphoesterase family JQX13_00445 PF13193 AMP-binding enzyme C-terminal domain JQX13_00445 PF00501 AMP-binding enzyme JQX13_00485 PF12697 Alpha/beta hydrolase family JQX13_00505 PF00106 short chain dehydrogenase JQX13_00510 PF03575 Peptidase family S51 JQX13_00515 PF01979 Amidohydrolase family JQX13_00520 PF08245 Mur ligase middle domain JQX13_00520 PF08443 RimK-like ATP-grasp domain JQX13_00520 PF02875 Mur ligase family, glutamate ligase domain JQX13_00540 PF03575 Peptidase family S51 JQX13_00555 PF02837 Glycosyl hydrolases family 2, sugar binding domain JQX13_00555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JQX13_00555 PF00703 Glycosyl hydrolases family 2 JQX13_00555 PF16353 Domain of unknown function(DUF4981) JQX13_00555 PF02929 Beta galactosidase small chain JQX13_00560 PF10509 Galactokinase galactose-binding signature JQX13_00560 PF08544 GHMP kinases C terminal JQX13_00560 PF00288 GHMP kinases N terminal domain JQX13_00570 PF03275 UDP-galactopyranose mutase JQX13_00580 PF16363 GDP-mannose 4,6 dehydratase JQX13_00585 PF01321 Creatinase/Prolidase N-terminal domain JQX13_00585 PF00557 Metallopeptidase family M24 JQX13_00590 PF06470 SMC proteins Flexible Hinge Domain JQX13_00590 PF02463 RecF/RecN/SMC N terminal domain JQX13_00595 PF01464 Transglycosylase SLT domain JQX13_00595 PF14718 Soluble lytic murein transglycosylase L domain JQX13_00610 PF01590 GAF domain JQX13_00610 PF00158 Sigma-54 interaction domain JQX13_00615 PF00578 AhpC/TSA family JQX13_00620 PF02627 Carboxymuconolactone decarboxylase family JQX13_00625 PF00210 Ferritin-like domain JQX13_00635 PF00326 Prolyl oligopeptidase family JQX13_00635 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JQX13_00640 PF01431 Peptidase family M13 JQX13_00640 PF05649 Peptidase family M13 JQX13_00645 PF07681 DoxX JQX13_00650 PF02417 Chromate transporter JQX13_00670 PF17932 Tetracyclin repressor-like, C-terminal domain JQX13_00670 PF00440 Bacterial regulatory proteins, tetR family JQX13_00675 PF00561 alpha/beta hydrolase fold JQX13_00680 PF00561 alpha/beta hydrolase fold JQX13_00705 PF08446 PAS fold JQX13_00705 PF00512 His Kinase A (phospho-acceptor) domain JQX13_00705 PF01590 GAF domain JQX13_00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_00705 PF00360 Phytochrome region JQX13_00710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_00710 PF00672 HAMP domain JQX13_00710 PF00512 His Kinase A (phospho-acceptor) domain JQX13_00715 PF00072 Response regulator receiver domain JQX13_00715 PF08769 Sporulation initiation factor Spo0A C terminal JQX13_00720 PF00155 Aminotransferase class I and II JQX13_00725 PF00392 Bacterial regulatory proteins, gntR family JQX13_00725 PF00155 Aminotransferase class I and II JQX13_00735 PF00701 Dihydrodipicolinate synthetase family JQX13_00740 PF04632 Fusaric acid resistance protein family JQX13_00750 PF13482 RNase_H superfamily JQX13_00755 PF00271 Helicase conserved C-terminal domain JQX13_00755 PF00270 DEAD/DEAH box helicase JQX13_00755 PF09369 Domain of unknown function (DUF1998) JQX13_00760 PF05139 Erythromycin esterase JQX13_00760 PF00156 Phosphoribosyl transferase domain JQX13_00765 PF00730 HhH-GPD superfamily base excision DNA repair protein JQX13_00780 PF04616 Glycosyl hydrolases family 43 JQX13_00780 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JQX13_00795 PF00355 Rieske [2Fe-2S] domain JQX13_00795 PF01266 FAD dependent oxidoreductase JQX13_00800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_00800 PF00672 HAMP domain JQX13_00800 PF01627 Hpt domain JQX13_00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_00800 PF00512 His Kinase A (phospho-acceptor) domain JQX13_00800 PF00072 Response regulator receiver domain JQX13_00805 PF00072 Response regulator receiver domain JQX13_00810 PF13411 MerR HTH family regulatory protein JQX13_00830 PF00005 ABC transporter JQX13_00830 PF13732 Domain of unknown function (DUF4162) JQX13_00835 PF01370 NAD dependent epimerase/dehydratase family JQX13_00835 PF08338 Domain of unknown function (DUF1731) JQX13_00840 PF03481 Putative GTP-binding controlling metal-binding JQX13_00840 PF01300 Telomere recombination JQX13_00850 PF00762 Ferrochelatase JQX13_00855 PF04379 ApaG domain JQX13_00860 PF03741 Integral membrane protein TerC family JQX13_00865 PF00128 Alpha amylase, catalytic domain JQX13_00865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JQX13_00870 PF00128 Alpha amylase, catalytic domain JQX13_00880 PF01370 NAD dependent epimerase/dehydratase family JQX13_00895 PF00501 AMP-binding enzyme JQX13_00895 PF13193 AMP-binding enzyme C-terminal domain JQX13_00900 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JQX13_00905 PF00990 Diguanylate cyclase, GGDEF domain JQX13_00905 PF00072 Response regulator receiver domain JQX13_00910 PF00483 Nucleotidyl transferase JQX13_00920 PF00962 Adenosine/AMP deaminase JQX13_00940 PF00580 UvrD/REP helicase N-terminal domain JQX13_00940 PF13361 UvrD-like helicase C-terminal domain JQX13_00970 PF13460 NAD(P)H-binding JQX13_00985 PF00512 His Kinase A (phospho-acceptor) domain JQX13_00985 PF00072 Response regulator receiver domain JQX13_00985 PF00672 HAMP domain JQX13_00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_00985 PF01627 Hpt domain JQX13_00985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01000 PF00672 HAMP domain JQX13_01000 PF18698 Histidine kinase sensor domain JQX13_01000 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01000 PF00989 PAS fold JQX13_01005 PF00072 Response regulator receiver domain JQX13_01010 PF08446 PAS fold JQX13_01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01010 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01010 PF00360 Phytochrome region JQX13_01010 PF01590 GAF domain JQX13_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01015 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01015 PF08448 PAS fold JQX13_01015 PF13426 PAS domain JQX13_01015 PF00072 Response regulator receiver domain JQX13_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01070 PF00072 Response regulator receiver domain JQX13_01070 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01070 PF09308 LuxQ, periplasmic JQX13_01110 PF02798 Glutathione S-transferase, N-terminal domain JQX13_01190 PF17871 AAA lid domain JQX13_01190 PF02861 Clp amino terminal domain, pathogenicity island component JQX13_01190 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_01190 PF07724 AAA domain (Cdc48 subfamily) JQX13_01190 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_01195 PF00404 Dockerin type I domain JQX13_01195 PF17996 Carbohydrate esterase 2 N-terminal JQX13_01195 PF00657 GDSL-like Lipase/Acylhydrolase JQX13_01195 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_01210 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01210 PF00672 HAMP domain JQX13_01220 PF01960 ArgJ family JQX13_01225 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01230 PF07969 Amidohydrolase family JQX13_01235 PF00485 Phosphoribulokinase / Uridine kinase family JQX13_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01275 PF09456 RcsC Alpha-Beta-Loop (ABL) JQX13_01275 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01275 PF00072 Response regulator receiver domain JQX13_01280 PF04754 Putative transposase, YhgA-like JQX13_01285 PF00939 Sodium:sulfate symporter transmembrane region JQX13_01290 PF00005 ABC transporter JQX13_01315 PF06983 3-demethylubiquinone-9 3-methyltransferase JQX13_01325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JQX13_01325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JQX13_01330 PF00440 Bacterial regulatory proteins, tetR family JQX13_01340 PF00561 alpha/beta hydrolase fold JQX13_01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01360 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01360 PF08448 PAS fold JQX13_01360 PF13426 PAS domain JQX13_01360 PF00072 Response regulator receiver domain JQX13_01365 PF00999 Sodium/hydrogen exchanger family JQX13_01365 PF02254 TrkA-N domain JQX13_01380 PF00005 ABC transporter JQX13_01380 PF03412 Peptidase C39 family JQX13_01380 PF00664 ABC transporter transmembrane region JQX13_01390 PF01494 FAD binding domain JQX13_01395 PF01061 ABC-2 type transporter JQX13_01400 PF00005 ABC transporter JQX13_01415 PF00873 AcrB/AcrD/AcrF family JQX13_01420 PF01226 Formate/nitrite transporter JQX13_01425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQX13_01435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JQX13_01435 PF01411 tRNA synthetases class II (A) JQX13_01435 PF02272 DHHA1 domain JQX13_01455 PF00723 Glycosyl hydrolases family 15 JQX13_01470 PF04304 Protein of unknown function (DUF454) JQX13_01475 PF06441 Epoxide hydrolase N terminus JQX13_01480 PF17770 Ribonuclease J C-terminal domain JQX13_01480 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JQX13_01480 PF12706 Beta-lactamase superfamily domain JQX13_01485 PF04461 Protein of unknown function (DUF520) JQX13_01495 PF00919 Uncharacterized protein family UPF0004 JQX13_01495 PF18693 TRAM domain JQX13_01495 PF04055 Radical SAM superfamily JQX13_01515 PF00588 SpoU rRNA Methylase family JQX13_01515 PF12105 SpoU, rRNA methylase, C-terminal JQX13_01520 PF01018 GTP1/OBG JQX13_01520 PF01926 50S ribosome-binding GTPase JQX13_01525 PF01016 Ribosomal L27 protein JQX13_01530 PF00829 Ribosomal prokaryotic L21 protein JQX13_01560 PF00484 Carbonic anhydrase JQX13_01565 PF02637 GatB domain JQX13_01565 PF02934 GatB/GatE catalytic domain JQX13_01570 PF01425 Amidase JQX13_01575 PF02686 Glu-tRNAGln amidotransferase C subunit JQX13_01585 PF01580 FtsK/SpoIIIE family JQX13_01585 PF09397 Ftsk gamma domain JQX13_01585 PF17854 FtsK alpha domain JQX13_01585 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JQX13_01590 PF05736 OprF membrane domain JQX13_01590 PF00691 OmpA family JQX13_01605 PF10672 S-adenosylmethionine-dependent methyltransferase JQX13_01605 PF02926 THUMP domain JQX13_01605 PF01170 Putative RNA methylase family UPF0020 JQX13_01610 PF02660 Glycerol-3-phosphate acyltransferase JQX13_01645 PF00593 TonB dependent receptor JQX13_01655 PF01618 MotA/TolQ/ExbB proton channel family JQX13_01660 PF02472 Biopolymer transport protein ExbD/TolR JQX13_01665 PF02472 Biopolymer transport protein ExbD/TolR JQX13_01680 PF01078 Magnesium chelatase, subunit ChlI JQX13_01680 PF13335 Magnesium chelatase, subunit ChlI C-terminal JQX13_01685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_01690 PF01553 Acyltransferase JQX13_01695 PF00154 recA bacterial DNA recombination protein JQX13_01710 PF00994 Probable molybdopterin binding domain JQX13_01710 PF02464 Competence-damaged protein JQX13_01710 PF18146 Damage-inducible protein CinA KH domain JQX13_01715 PF01066 CDP-alcohol phosphatidyltransferase JQX13_01730 PF00216 Bacterial DNA-binding protein JQX13_01735 PF08525 Opacity-associated protein A N-terminal motif JQX13_01735 PF01476 LysM domain JQX13_01735 PF01551 Peptidase family M23 JQX13_01740 PF00633 Helix-hairpin-helix motif JQX13_01740 PF00730 HhH-GPD superfamily base excision DNA repair protein JQX13_01745 PF01327 Polypeptide deformylase JQX13_01755 PF00226 DnaJ domain JQX13_01755 PF01556 DnaJ C terminal domain JQX13_01755 PF00684 DnaJ central domain JQX13_01760 PF18074 Primosomal protein N C-terminal domain JQX13_01760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JQX13_01760 PF04851 Type III restriction enzyme, res subunit JQX13_01760 PF00271 Helicase conserved C-terminal domain JQX13_01760 PF17764 3′ DNA-binding domain (3′BD) JQX13_01780 PF00849 RNA pseudouridylate synthase JQX13_01780 PF01479 S4 domain JQX13_01820 PF00535 Glycosyl transferase family 2 JQX13_01835 PF04209 homogentisate 1,2-dioxygenase JQX13_01840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQX13_01850 PF00849 RNA pseudouridylate synthase JQX13_01855 PF07690 Major Facilitator Superfamily JQX13_01905 PF16736 Single Cache-like JQX13_01905 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01905 PF00989 PAS fold JQX13_01910 PF06745 KaiC JQX13_01920 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_01920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_01920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_01930 PF00672 HAMP domain JQX13_01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_01930 PF00512 His Kinase A (phospho-acceptor) domain JQX13_01930 PF13426 PAS domain JQX13_01955 PF00069 Protein kinase domain JQX13_01980 PF00106 short chain dehydrogenase JQX13_01985 PF03033 Glycosyltransferase family 28 N-terminal domain JQX13_01985 PF04101 Glycosyltransferase family 28 C-terminal domain JQX13_01995 PF03466 LysR substrate binding domain JQX13_01995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_02010 PF00069 Protein kinase domain JQX13_02015 PF01189 16S rRNA methyltransferase RsmB/F JQX13_02015 PF01029 NusB family JQX13_02020 PF01220 Dehydroquinase class II JQX13_02025 PF02911 Formyl transferase, C-terminal domain JQX13_02025 PF00551 Formyl transferase JQX13_02040 PF01965 DJ-1/PfpI family JQX13_02045 PF01965 DJ-1/PfpI family JQX13_02070 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_02070 PF03413 Peptidase propeptide and YPEB domain JQX13_02070 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_02070 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_02070 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_02085 PF00072 Response regulator receiver domain JQX13_02085 PF00512 His Kinase A (phospho-acceptor) domain JQX13_02085 PF13188 PAS domain JQX13_02085 PF08448 PAS fold JQX13_02100 PF00183 Hsp90 protein JQX13_02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_02110 PF00248 Aldo/keto reductase family JQX13_02115 PF02954 Bacterial regulatory protein, Fis family JQX13_02115 PF00158 Sigma-54 interaction domain JQX13_02115 PF00072 Response regulator receiver domain JQX13_02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_02120 PF08448 PAS fold JQX13_02120 PF00512 His Kinase A (phospho-acceptor) domain JQX13_02120 PF00072 Response regulator receiver domain JQX13_02120 PF13188 PAS domain JQX13_02125 PF17674 HHH domain JQX13_02125 PF00575 S1 RNA binding domain JQX13_02125 PF16921 Tex protein YqgF-like domain JQX13_02125 PF09371 Tex-like protein N-terminal domain JQX13_02135 PF00593 TonB dependent receptor JQX13_02145 PF01235 Sodium:alanine symporter family JQX13_02175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JQX13_02175 PF13378 Enolase C-terminal domain-like JQX13_02180 PF07687 Peptidase dimerisation domain JQX13_02180 PF01546 Peptidase family M20/M25/M40 JQX13_02210 PF04389 Peptidase family M28 JQX13_02220 PF00154 recA bacterial DNA recombination protein JQX13_02230 PF00069 Protein kinase domain JQX13_02235 PF03477 ATP cone domain JQX13_02235 PF00317 Ribonucleotide reductase, all-alpha domain JQX13_02235 PF02867 Ribonucleotide reductase, barrel domain JQX13_02240 PF00268 Ribonucleotide reductase, small chain JQX13_02245 PF01380 SIS domain JQX13_02250 PF12804 MobA-like NTP transferase domain JQX13_02250 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_02285 PF00072 Response regulator receiver domain JQX13_02295 PF00005 ABC transporter JQX13_02320 PF00561 alpha/beta hydrolase fold JQX13_02340 PF00850 Histone deacetylase domain JQX13_02360 PF17954 Quercetinase C-terminal cupin domain JQX13_02360 PF02678 Pirin JQX13_02365 PF04264 YceI-like domain JQX13_02380 PF03462 PCRF domain JQX13_02380 PF00472 RF-1 domain JQX13_02385 PF00330 Aconitase family (aconitate hydratase) JQX13_02385 PF00694 Aconitase C-terminal domain JQX13_02395 PF01068 ATP dependent DNA ligase domain JQX13_02395 PF13298 DNA polymerase Ligase (LigD) JQX13_02395 PF04679 ATP dependent DNA ligase C terminal region JQX13_02400 PF00501 AMP-binding enzyme JQX13_02400 PF16177 Acetyl-coenzyme A synthetase N-terminus JQX13_02400 PF13193 AMP-binding enzyme C-terminal domain JQX13_02405 PF00672 HAMP domain JQX13_02405 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_02405 PF02743 Cache domain JQX13_02420 PF13458 Periplasmic binding protein JQX13_02435 PF03929 PepSY-associated TM region JQX13_02440 PF07715 TonB-dependent Receptor Plug Domain JQX13_02440 PF00593 TonB dependent receptor JQX13_02455 PF13091 PLD-like domain JQX13_02460 PF16697 Inner membrane component of T3SS, cytoplasmic domain JQX13_02480 PF01472 PUA domain JQX13_02480 PF00696 Amino acid kinase family JQX13_02495 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JQX13_02495 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JQX13_02505 PF07690 Major Facilitator Superfamily JQX13_02510 PF08220 DeoR-like helix-turn-helix domain JQX13_02510 PF00455 DeoR C terminal sensor domain JQX13_02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_02515 PF16736 Single Cache-like JQX13_02515 PF00989 PAS fold JQX13_02515 PF00512 His Kinase A (phospho-acceptor) domain JQX13_02520 PF00072 Response regulator receiver domain JQX13_02520 PF00486 Transcriptional regulatory protein, C terminal JQX13_02550 PF01979 Amidohydrolase family JQX13_02555 PF02954 Bacterial regulatory protein, Fis family JQX13_02555 PF00072 Response regulator receiver domain JQX13_02555 PF00158 Sigma-54 interaction domain JQX13_02580 PF00069 Protein kinase domain JQX13_02580 PF03793 PASTA domain JQX13_02585 PF01979 Amidohydrolase family JQX13_02620 PF02463 RecF/RecN/SMC N terminal domain JQX13_02635 PF00115 Cytochrome C and Quinol oxidase polypeptide I JQX13_02640 PF11066 Protein of unknown function (DUF2867) JQX13_02640 PF13460 NAD(P)H-binding JQX13_02655 PF00128 Alpha amylase, catalytic domain JQX13_02655 PF09081 Domain of unknown function (DUF1921) JQX13_02655 PF00686 Starch binding domain JQX13_02675 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JQX13_02680 PF00512 His Kinase A (phospho-acceptor) domain JQX13_02680 PF00989 PAS fold JQX13_02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_02685 PF00512 His Kinase A (phospho-acceptor) domain JQX13_02685 PF08448 PAS fold JQX13_02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_02685 PF13188 PAS domain JQX13_02685 PF00072 Response regulator receiver domain JQX13_02695 PF00128 Alpha amylase, catalytic domain JQX13_02695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JQX13_02710 PF00999 Sodium/hydrogen exchanger family JQX13_02710 PF02254 TrkA-N domain JQX13_02720 PF00571 CBS domain JQX13_02720 PF03471 Transporter associated domain JQX13_02730 PF03793 PASTA domain JQX13_02730 PF00069 Protein kinase domain JQX13_02735 PF08323 Starch synthase catalytic domain JQX13_02735 PF00534 Glycosyl transferases group 1 JQX13_02740 PF01243 Pyridoxamine 5'-phosphate oxidase JQX13_02740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JQX13_02745 PF00106 short chain dehydrogenase JQX13_02750 PF01593 Flavin containing amine oxidoreductase JQX13_02765 PF06580 Histidine kinase JQX13_02765 PF07694 5TMR of 5TMR-LYT JQX13_02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_02775 PF00482 Type II secretion system (T2SS), protein F JQX13_02800 PF00106 short chain dehydrogenase JQX13_02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_02805 PF03466 LysR substrate binding domain JQX13_02810 PF13380 CoA binding domain JQX13_02815 PF00480 ROK family JQX13_02835 PF04675 DNA ligase N terminus JQX13_02835 PF01068 ATP dependent DNA ligase domain JQX13_02835 PF04679 ATP dependent DNA ligase C terminal region JQX13_02840 PF00270 DEAD/DEAH box helicase JQX13_02840 PF08494 DEAD/H associated JQX13_02840 PF00271 Helicase conserved C-terminal domain JQX13_02855 PF00672 HAMP domain JQX13_02855 PF02203 Tar ligand binding domain homologue JQX13_02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_02860 PF04397 LytTr DNA-binding domain JQX13_02860 PF00072 Response regulator receiver domain JQX13_02870 PF00990 Diguanylate cyclase, GGDEF domain JQX13_02870 PF07694 5TMR of 5TMR-LYT JQX13_02885 PF04055 Radical SAM superfamily JQX13_02910 PF03466 LysR substrate binding domain JQX13_02910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_02925 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_02925 PF00082 Subtilase family JQX13_02945 PF00501 AMP-binding enzyme JQX13_02945 PF13193 AMP-binding enzyme C-terminal domain JQX13_02945 PF16177 Acetyl-coenzyme A synthetase N-terminus JQX13_02970 PF01381 Helix-turn-helix JQX13_02970 PF07883 Cupin domain JQX13_02975 PF00248 Aldo/keto reductase family JQX13_02985 PF00561 alpha/beta hydrolase fold JQX13_02995 PF00069 Protein kinase domain JQX13_03015 PF00578 AhpC/TSA family JQX13_03030 PF01171 PP-loop family JQX13_03050 PF01433 Peptidase family M1 domain JQX13_03050 PF11838 ERAP1-like C-terminal domain JQX13_03060 PF13302 Acetyltransferase (GNAT) domain JQX13_03075 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JQX13_03085 PF00069 Protein kinase domain JQX13_03085 PF07238 PilZ domain JQX13_03110 PF00069 Protein kinase domain JQX13_03125 PF03793 PASTA domain JQX13_03125 PF00069 Protein kinase domain JQX13_03135 PF00009 Elongation factor Tu GTP binding domain JQX13_03135 PF03144 Elongation factor Tu domain 2 JQX13_03135 PF16658 Class II release factor RF3, C-terminal domain JQX13_03150 PF04389 Peptidase family M28 JQX13_03170 PF00005 ABC transporter JQX13_03180 PF03793 PASTA domain JQX13_03180 PF00069 Protein kinase domain JQX13_03200 PF12697 Alpha/beta hydrolase family JQX13_03225 PF13732 Domain of unknown function (DUF4162) JQX13_03225 PF00005 ABC transporter JQX13_03250 PF00248 Aldo/keto reductase family JQX13_03255 PF07687 Peptidase dimerisation domain JQX13_03255 PF01546 Peptidase family M20/M25/M40 JQX13_03260 PF00072 Response regulator receiver domain JQX13_03270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_03275 PF02926 THUMP domain JQX13_03275 PF01170 Putative RNA methylase family UPF0020 JQX13_03290 PF01106 NifU-like domain JQX13_03310 PF02617 ATP-dependent Clp protease adaptor protein ClpS JQX13_03315 PF02861 Clp amino terminal domain, pathogenicity island component JQX13_03315 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_03315 PF17871 AAA lid domain JQX13_03315 PF07724 AAA domain (Cdc48 subfamily) JQX13_03315 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_03320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_03320 PF00672 HAMP domain JQX13_03325 PF00072 Response regulator receiver domain JQX13_03325 PF01339 CheB methylesterase JQX13_03330 PF00072 Response regulator receiver domain JQX13_03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_03330 PF01584 CheW-like domain JQX13_03330 PF01627 Hpt domain JQX13_03340 PF03705 CheR methyltransferase, all-alpha domain JQX13_03340 PF01739 CheR methyltransferase, SAM binding domain JQX13_03345 PF00990 Diguanylate cyclase, GGDEF domain JQX13_03345 PF00072 Response regulator receiver domain JQX13_03350 PF00072 Response regulator receiver domain JQX13_03350 PF01339 CheB methylesterase JQX13_03360 PF16078 2-oxoglutarate dehydrogenase N-terminus JQX13_03360 PF00676 Dehydrogenase E1 component JQX13_03360 PF16870 2-oxoglutarate dehydrogenase C-terminal JQX13_03360 PF02779 Transketolase, pyrimidine binding domain JQX13_03365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JQX13_03365 PF00364 Biotin-requiring enzyme JQX13_03365 PF02817 e3 binding domain JQX13_03370 PF00313 'Cold-shock' DNA-binding domain JQX13_03375 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JQX13_03375 PF00326 Prolyl oligopeptidase family JQX13_03385 PF00672 HAMP domain JQX13_03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_03400 PF00486 Transcriptional regulatory protein, C terminal JQX13_03400 PF00072 Response regulator receiver domain JQX13_03405 PF01497 Periplasmic binding protein JQX13_03430 PF00069 Protein kinase domain JQX13_03435 PF00593 TonB dependent receptor JQX13_03435 PF07715 TonB-dependent Receptor Plug Domain JQX13_03450 PF01794 Ferric reductase like transmembrane component JQX13_03455 PF00174 Oxidoreductase molybdopterin binding domain JQX13_03460 PF00487 Fatty acid desaturase JQX13_03470 PF03793 PASTA domain JQX13_03470 PF00069 Protein kinase domain JQX13_03480 PF01593 Flavin containing amine oxidoreductase JQX13_03490 PF02885 Glycosyl transferase family, helical bundle domain JQX13_03490 PF00591 Glycosyl transferase family, a/b domain JQX13_03495 PF00218 Indole-3-glycerol phosphate synthase JQX13_03500 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JQX13_03505 PF00291 Pyridoxal-phosphate dependent enzyme JQX13_03510 PF00290 Tryptophan synthase alpha chain JQX13_03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_03525 PF00300 Histidine phosphatase superfamily (branch 1) JQX13_03550 PF05922 Peptidase inhibitor I9 JQX13_03550 PF00082 Subtilase family JQX13_03585 PF00117 Glutamine amidotransferase class-I JQX13_03590 PF00425 chorismate binding enzyme JQX13_03590 PF04715 Anthranilate synthase component I, N terminal region JQX13_03595 PF01965 DJ-1/PfpI family JQX13_03605 PF01272 Transcription elongation factor, GreA/GreB, C-term JQX13_03605 PF03449 Transcription elongation factor, N-terminal JQX13_03615 PF00106 short chain dehydrogenase JQX13_03630 PF00037 4Fe-4S binding domain JQX13_03630 PF13247 4Fe-4S dicluster domain JQX13_03665 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JQX13_03670 PF00115 Cytochrome C and Quinol oxidase polypeptide I JQX13_03675 PF00510 Cytochrome c oxidase subunit III JQX13_03735 PF03621 MbtH-like protein JQX13_03740 PF13538 UvrD-like helicase C-terminal domain JQX13_03745 PF00149 Calcineurin-like phosphoesterase JQX13_03750 PF13538 UvrD-like helicase C-terminal domain JQX13_03755 PF00128 Alpha amylase, catalytic domain JQX13_03755 PF00686 Starch binding domain JQX13_03755 PF09081 Domain of unknown function (DUF1921) JQX13_03760 PF03793 PASTA domain JQX13_03760 PF00069 Protein kinase domain JQX13_03775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JQX13_03780 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_03785 PF12911 N-terminal TM domain of oligopeptide transport permease C JQX13_03785 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_03790 PF00005 ABC transporter JQX13_03790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JQX13_03795 PF00005 ABC transporter JQX13_03795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JQX13_03800 PF01915 Glycosyl hydrolase family 3 C-terminal domain JQX13_03800 PF14310 Fibronectin type III-like domain JQX13_03800 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_03820 PF00561 alpha/beta hydrolase fold JQX13_03830 PF00459 Inositol monophosphatase family JQX13_03845 PF04616 Glycosyl hydrolases family 43 JQX13_03850 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JQX13_03880 PF00106 short chain dehydrogenase JQX13_03895 PF00975 Thioesterase domain JQX13_03925 PF01494 FAD binding domain JQX13_03935 PF01494 FAD binding domain JQX13_03940 PF00958 GMP synthase C terminal domain JQX13_03940 PF03352 Methyladenine glycosylase JQX13_03940 PF13302 Acetyltransferase (GNAT) domain JQX13_03940 PF13673 Acetyltransferase (GNAT) domain JQX13_03940 PF00117 Glutamine amidotransferase class-I JQX13_03945 PF03193 RsgA GTPase JQX13_03985 PF13508 Acetyltransferase (GNAT) domain JQX13_03990 PF00144 Beta-lactamase JQX13_03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_03995 PF08448 PAS fold JQX13_03995 PF13188 PAS domain JQX13_03995 PF00072 Response regulator receiver domain JQX13_03995 PF00512 His Kinase A (phospho-acceptor) domain JQX13_04000 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JQX13_04000 PF10531 SLBB domain JQX13_04000 PF02563 Polysaccharide biosynthesis/export protein JQX13_04005 PF13807 G-rich domain on putative tyrosine kinase JQX13_04005 PF02706 Chain length determinant protein JQX13_04005 PF13614 AAA domain JQX13_04025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JQX13_04025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JQX13_04025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JQX13_04030 PF02397 Bacterial sugar transferase JQX13_04035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JQX13_04050 PF02719 Polysaccharide biosynthesis protein JQX13_04070 PF00072 Response regulator receiver domain JQX13_04070 PF00158 Sigma-54 interaction domain JQX13_04070 PF02954 Bacterial regulatory protein, Fis family JQX13_04130 PF08281 Sigma-70, region 4 JQX13_04130 PF04542 Sigma-70 region 2 JQX13_04140 PF00107 Zinc-binding dehydrogenase JQX13_04140 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_04165 PF00834 Ribulose-phosphate 3 epimerase family JQX13_04175 PF02887 Pyruvate kinase, alpha/beta domain JQX13_04175 PF00224 Pyruvate kinase, barrel domain JQX13_04175 PF00391 PEP-utilising enzyme, mobile domain JQX13_04190 PF05670 NFACT protein RNA binding domain JQX13_04200 PF00232 Glycosyl hydrolase family 1 JQX13_04205 PF01207 Dihydrouridine synthase (Dus) JQX13_04220 PF04542 Sigma-70 region 2 JQX13_04220 PF04545 Sigma-70, region 4 JQX13_04230 PF00654 Voltage gated chloride channel JQX13_04275 PF00355 Rieske [2Fe-2S] domain JQX13_04280 PF00512 His Kinase A (phospho-acceptor) domain JQX13_04280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_04280 PF00072 Response regulator receiver domain JQX13_04280 PF09456 RcsC Alpha-Beta-Loop (ABL) JQX13_04300 PF01979 Amidohydrolase family JQX13_04330 PF04794 YdjC-like protein JQX13_04335 PF00176 SNF2 family N-terminal domain JQX13_04335 PF00271 Helicase conserved C-terminal domain JQX13_04335 PF12419 SNF2 Helicase protein JQX13_04380 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JQX13_04380 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_04385 PF04898 Glutamate synthase central domain JQX13_04385 PF01645 Conserved region in glutamate synthase JQX13_04385 PF01493 GXGXG motif JQX13_04385 PF00310 Glutamine amidotransferases class-II JQX13_04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_04390 PF00512 His Kinase A (phospho-acceptor) domain JQX13_04395 PF14489 QueF-like protein JQX13_04400 PF03793 PASTA domain JQX13_04400 PF00069 Protein kinase domain JQX13_04410 PF13091 PLD-like domain JQX13_04415 PF00072 Response regulator receiver domain JQX13_04420 PF06745 KaiC JQX13_04425 PF00072 Response regulator receiver domain JQX13_04425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_04425 PF00512 His Kinase A (phospho-acceptor) domain JQX13_04425 PF09456 RcsC Alpha-Beta-Loop (ABL) JQX13_04430 PF00069 Protein kinase domain JQX13_04480 PF00027 Cyclic nucleotide-binding domain JQX13_04480 PF00520 Ion transport protein JQX13_04490 PF00144 Beta-lactamase JQX13_04490 PF11954 Domain of unknown function (DUF3471) JQX13_04495 PF03793 PASTA domain JQX13_04495 PF00069 Protein kinase domain JQX13_04520 PF02503 Polyphosphate kinase middle domain JQX13_04520 PF13089 Polyphosphate kinase N-terminal domain JQX13_04520 PF17941 Polyphosphate kinase C-terminal domain 1 JQX13_04520 PF13090 Polyphosphate kinase C-terminal domain 2 JQX13_04525 PF02541 Ppx/GppA phosphatase family JQX13_04530 PF13823 Alcohol dehydrogenase GroES-associated JQX13_04530 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_04530 PF00107 Zinc-binding dehydrogenase JQX13_04535 PF02547 Queuosine biosynthesis protein JQX13_04540 PF00106 short chain dehydrogenase JQX13_04580 PF13419 Haloacid dehalogenase-like hydrolase JQX13_04590 PF01966 HD domain JQX13_04590 PF00072 Response regulator receiver domain JQX13_04600 PF00180 Isocitrate/isopropylmalate dehydrogenase JQX13_04600 PF18324 Hypothetical protein TT1725 JQX13_04605 PF00873 AcrB/AcrD/AcrF family JQX13_04610 PF13533 Biotin-lipoyl like JQX13_04615 PF02321 Outer membrane efflux protein JQX13_04625 PF03965 Penicillinase repressor JQX13_04635 PF01253 Translation initiation factor SUI1 JQX13_04650 PF08669 Glycine cleavage T-protein C-terminal barrel domain JQX13_04650 PF01571 Aminomethyltransferase folate-binding domain JQX13_04655 PF00072 Response regulator receiver domain JQX13_04655 PF13188 PAS domain JQX13_04655 PF00512 His Kinase A (phospho-acceptor) domain JQX13_04655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_04655 PF08448 PAS fold JQX13_04660 PF13417 Glutathione S-transferase, N-terminal domain JQX13_04690 PF00072 Response regulator receiver domain JQX13_04690 PF00486 Transcriptional regulatory protein, C terminal JQX13_04695 PF00672 HAMP domain JQX13_04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_04695 PF00512 His Kinase A (phospho-acceptor) domain JQX13_04700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JQX13_04705 PF00005 ABC transporter JQX13_04710 PF00005 ABC transporter JQX13_04710 PF12704 MacB-like periplasmic core domain JQX13_04710 PF02687 FtsX-like permease family JQX13_04725 PF00083 Sugar (and other) transporter JQX13_04740 PF00795 Carbon-nitrogen hydrolase JQX13_04745 PF02798 Glutathione S-transferase, N-terminal domain JQX13_04760 PF00300 Histidine phosphatase superfamily (branch 1) JQX13_04765 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_04765 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JQX13_04800 PF00759 Glycosyl hydrolase family 9 JQX13_04800 PF02927 Cellulase N-terminal ig-like domain JQX13_04800 PF02018 Carbohydrate binding domain JQX13_04845 PF04235 Protein of unknown function (DUF418) JQX13_04850 PF02798 Glutathione S-transferase, N-terminal domain JQX13_04850 PF00043 Glutathione S-transferase, C-terminal domain JQX13_04855 PF03060 Nitronate monooxygenase JQX13_04865 PF03466 LysR substrate binding domain JQX13_04865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_04870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JQX13_04885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_04885 PF00512 His Kinase A (phospho-acceptor) domain JQX13_04905 PF00069 Protein kinase domain JQX13_04920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JQX13_04920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JQX13_04920 PF01842 ACT domain JQX13_04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_04925 PF03466 LysR substrate binding domain JQX13_04935 PF07995 Glucose / Sorbosone dehydrogenase JQX13_04945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JQX13_04945 PF00753 Metallo-beta-lactamase superfamily JQX13_04945 PF10996 Beta-Casp domain JQX13_04950 PF00440 Bacterial regulatory proteins, tetR family JQX13_04955 PF00107 Zinc-binding dehydrogenase JQX13_04955 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_04960 PF00171 Aldehyde dehydrogenase family JQX13_04965 PF01590 GAF domain JQX13_04965 PF00158 Sigma-54 interaction domain JQX13_04965 PF02954 Bacterial regulatory protein, Fis family JQX13_04970 PF01565 FAD binding domain JQX13_04970 PF02913 FAD linked oxidases, C-terminal domain JQX13_05015 PF00512 His Kinase A (phospho-acceptor) domain JQX13_05015 PF07689 KaiB domain JQX13_05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_05020 PF18029 Glyoxalase-like domain JQX13_05030 PF00440 Bacterial regulatory proteins, tetR family JQX13_05035 PF01464 Transglycosylase SLT domain JQX13_05040 PF03932 CutC family JQX13_05050 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JQX13_05055 PF00365 Phosphofructokinase JQX13_05060 PF13478 XdhC Rossmann domain JQX13_05060 PF02625 XdhC and CoxI family JQX13_05085 PF06508 Queuosine biosynthesis protein QueC JQX13_05115 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_05115 PF00069 Protein kinase domain JQX13_05125 PF00512 His Kinase A (phospho-acceptor) domain JQX13_05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_05125 PF02743 Cache domain JQX13_05130 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JQX13_05130 PF08448 PAS fold JQX13_05130 PF00672 HAMP domain JQX13_05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_05130 PF00512 His Kinase A (phospho-acceptor) domain JQX13_05150 PF00534 Glycosyl transferases group 1 JQX13_05150 PF13439 Glycosyltransferase Family 4 JQX13_05165 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_05165 PF00107 Zinc-binding dehydrogenase JQX13_05175 PF12680 SnoaL-like domain JQX13_05175 PF04542 Sigma-70 region 2 JQX13_05175 PF08281 Sigma-70, region 4 JQX13_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_05185 PF00171 Aldehyde dehydrogenase family JQX13_05190 PF00378 Enoyl-CoA hydratase/isomerase JQX13_05190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JQX13_05190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JQX13_05195 PF00108 Thiolase, N-terminal domain JQX13_05195 PF02803 Thiolase, C-terminal domain JQX13_05200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_05200 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_05200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_05205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_05205 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_05205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_05210 PF00501 AMP-binding enzyme JQX13_05215 PF00106 short chain dehydrogenase JQX13_05225 PF00378 Enoyl-CoA hydratase/isomerase JQX13_05230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_05230 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_05230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_05235 PF01636 Phosphotransferase enzyme family JQX13_05260 PF01494 FAD binding domain JQX13_05265 PF02311 AraC-like ligand binding domain JQX13_05265 PF12833 Helix-turn-helix domain JQX13_05270 PF01757 Acyltransferase family JQX13_05275 PF00696 Amino acid kinase family JQX13_05280 PF01118 Semialdehyde dehydrogenase, NAD binding domain JQX13_05280 PF02774 Semialdehyde dehydrogenase, dimerisation domain JQX13_05285 PF00583 Acetyltransferase (GNAT) family JQX13_05310 PF00633 Helix-hairpin-helix motif JQX13_05310 PF10576 Iron-sulfur binding domain of endonuclease III JQX13_05310 PF00730 HhH-GPD superfamily base excision DNA repair protein JQX13_05315 PF13091 PLD-like domain JQX13_05315 PF13396 Phospholipase_D-nuclease N-terminal JQX13_05335 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_05365 PF00501 AMP-binding enzyme JQX13_05385 PF02872 5'-nucleotidase, C-terminal domain JQX13_05385 PF17936 Bacterial Ig domain JQX13_05385 PF00149 Calcineurin-like phosphoesterase JQX13_05390 PF00561 alpha/beta hydrolase fold JQX13_05400 PF00574 Clp protease JQX13_05420 PF01168 Alanine racemase, N-terminal domain JQX13_05420 PF14031 Putative serine dehydratase domain JQX13_05425 PF02954 Bacterial regulatory protein, Fis family JQX13_05425 PF00072 Response regulator receiver domain JQX13_05425 PF00158 Sigma-54 interaction domain JQX13_05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_05445 PF03466 LysR substrate binding domain JQX13_05450 PF00069 Protein kinase domain JQX13_05455 PF10415 Fumarase C C-terminus JQX13_05455 PF00206 Lyase JQX13_05475 PF01274 Malate synthase JQX13_05480 PF00463 Isocitrate lyase family JQX13_05485 PF13514 AAA domain JQX13_05490 PF00149 Calcineurin-like phosphoesterase JQX13_05495 PF04055 Radical SAM superfamily JQX13_05495 PF00919 Uncharacterized protein family UPF0004 JQX13_05505 PF03167 Uracil DNA glycosylase superfamily JQX13_05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_05535 PF08447 PAS fold JQX13_05535 PF13426 PAS domain JQX13_05545 PF04055 Radical SAM superfamily JQX13_05555 PF04542 Sigma-70 region 2 JQX13_05555 PF08281 Sigma-70, region 4 JQX13_05560 PF02245 Methylpurine-DNA glycosylase (MPG) JQX13_05565 PF02446 4-alpha-glucanotransferase JQX13_05580 PF07244 Surface antigen variable number repeat JQX13_05580 PF01103 Surface antigen JQX13_05615 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JQX13_05625 PF00561 alpha/beta hydrolase fold JQX13_05705 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_05715 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JQX13_05715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_05715 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_05725 PF00512 His Kinase A (phospho-acceptor) domain JQX13_05725 PF01627 Hpt domain JQX13_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_05725 PF00072 Response regulator receiver domain JQX13_05730 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JQX13_05775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_05775 PF13493 Domain of unknown function (DUF4118) JQX13_05775 PF02702 Osmosensitive K+ channel His kinase sensor domain JQX13_05775 PF00512 His Kinase A (phospho-acceptor) domain JQX13_05785 PF07859 alpha/beta hydrolase fold JQX13_05800 PF00561 alpha/beta hydrolase fold JQX13_05805 PF00069 Protein kinase domain JQX13_05805 PF03793 PASTA domain JQX13_05810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_05810 PF18698 Histidine kinase sensor domain JQX13_05810 PF00512 His Kinase A (phospho-acceptor) domain JQX13_05810 PF00672 HAMP domain JQX13_05815 PF06745 KaiC JQX13_05835 PF00158 Sigma-54 interaction domain JQX13_05835 PF02954 Bacterial regulatory protein, Fis family JQX13_05835 PF00072 Response regulator receiver domain JQX13_05840 PF00072 Response regulator receiver domain JQX13_05840 PF13188 PAS domain JQX13_05840 PF08448 PAS fold JQX13_05840 PF00512 His Kinase A (phospho-acceptor) domain JQX13_05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_05845 PF00072 Response regulator receiver domain JQX13_05845 PF02954 Bacterial regulatory protein, Fis family JQX13_05845 PF00158 Sigma-54 interaction domain JQX13_05850 PF00067 Cytochrome P450 JQX13_05875 PF07715 TonB-dependent Receptor Plug Domain JQX13_05875 PF00593 TonB dependent receptor JQX13_05900 PF08659 KR domain JQX13_05900 PF00698 Acyl transferase domain JQX13_05900 PF00550 Phosphopantetheine attachment site JQX13_05900 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_05900 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_05900 PF09277 Erythronolide synthase, docking JQX13_05900 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_05900 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_05900 PF14765 Polyketide synthase dehydratase JQX13_05900 PF08990 Erythronolide synthase docking JQX13_05920 PF02417 Chromate transporter JQX13_05925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JQX13_05935 PF09828 Chromate resistance exported protein JQX13_05945 PF12833 Helix-turn-helix domain JQX13_05945 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JQX13_05960 PF02983 Alpha-lytic protease prodomain JQX13_05975 PF00069 Protein kinase domain JQX13_05975 PF03793 PASTA domain JQX13_05980 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JQX13_05985 PF00072 Response regulator receiver domain JQX13_05985 PF00486 Transcriptional regulatory protein, C terminal JQX13_05995 PF02627 Carboxymuconolactone decarboxylase family JQX13_06005 PF02525 Flavodoxin-like fold JQX13_06080 PF12833 Helix-turn-helix domain JQX13_06080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JQX13_06085 PF00355 Rieske [2Fe-2S] domain JQX13_06110 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_06110 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_06110 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_06110 PF03413 Peptidase propeptide and YPEB domain JQX13_06140 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_06140 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_06140 PF03413 Peptidase propeptide and YPEB domain JQX13_06140 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_06140 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_06150 PF01882 Protein of unknown function DUF58 JQX13_06160 PF00005 ABC transporter JQX13_06170 PF07726 ATPase family associated with various cellular activities (AAA) JQX13_06170 PF17863 AAA lid domain JQX13_06185 PF07715 TonB-dependent Receptor Plug Domain JQX13_06185 PF00593 TonB dependent receptor JQX13_06195 PF00012 Hsp70 protein JQX13_06200 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_06200 PF04389 Peptidase family M28 JQX13_06215 PF00069 Protein kinase domain JQX13_06215 PF07238 PilZ domain JQX13_06230 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_06230 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_06230 PF03413 Peptidase propeptide and YPEB domain JQX13_06230 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_06235 PF01618 MotA/TolQ/ExbB proton channel family JQX13_06240 PF02472 Biopolymer transport protein ExbD/TolR JQX13_06265 PF00067 Cytochrome P450 JQX13_06270 PF12697 Alpha/beta hydrolase family JQX13_06285 PF00691 OmpA family JQX13_06285 PF13488 Glycine zipper JQX13_06290 PF02608 ABC transporter substrate-binding protein PnrA-like JQX13_06295 PF00480 ROK family JQX13_06300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JQX13_06300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JQX13_06300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JQX13_06300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JQX13_06320 PF00069 Protein kinase domain JQX13_06320 PF07238 PilZ domain JQX13_06335 PF00483 Nucleotidyl transferase JQX13_06335 PF01050 Mannose-6-phosphate isomerase JQX13_06345 PF03062 MBOAT, membrane-bound O-acyltransferase family JQX13_06360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_06360 PF00512 His Kinase A (phospho-acceptor) domain JQX13_06365 PF00486 Transcriptional regulatory protein, C terminal JQX13_06365 PF00072 Response regulator receiver domain JQX13_06375 PF02673 Bacitracin resistance protein BacA JQX13_06385 PF07228 Stage II sporulation protein E (SpoIIE) JQX13_06385 PF13426 PAS domain JQX13_06390 PF12697 Alpha/beta hydrolase family JQX13_06395 PF13180 PDZ domain JQX13_06405 PF00593 TonB dependent receptor JQX13_06410 PF00905 Penicillin binding protein transpeptidase domain JQX13_06425 PF12833 Helix-turn-helix domain JQX13_06440 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_06440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQX13_06445 PF00438 S-adenosylmethionine synthetase, N-terminal domain JQX13_06445 PF02773 S-adenosylmethionine synthetase, C-terminal domain JQX13_06445 PF02772 S-adenosylmethionine synthetase, central domain JQX13_06465 PF02492 CobW/HypB/UreG, nucleotide-binding domain JQX13_06470 PF01730 UreF JQX13_06475 PF01979 Amidohydrolase family JQX13_06475 PF00449 Urease alpha-subunit, N-terminal domain JQX13_06480 PF00699 Urease beta subunit JQX13_06480 PF00547 Urease, gamma subunit JQX13_06485 PF01774 UreD urease accessory protein JQX13_06490 PF00072 Response regulator receiver domain JQX13_06495 PF02743 Cache domain JQX13_06495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_06495 PF00512 His Kinase A (phospho-acceptor) domain JQX13_06500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JQX13_06500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JQX13_06505 PF00282 Pyridoxal-dependent decarboxylase conserved domain JQX13_06510 PF00072 Response regulator receiver domain JQX13_06510 PF00486 Transcriptional regulatory protein, C terminal JQX13_06520 PF01384 Phosphate transporter family JQX13_06530 PF02308 MgtC family JQX13_06535 PF02896 PEP-utilising enzyme, TIM barrel domain JQX13_06535 PF00391 PEP-utilising enzyme, mobile domain JQX13_06535 PF05524 PEP-utilising enzyme, N-terminal JQX13_06540 PF00381 PTS HPr component phosphorylation site JQX13_06545 PF03613 PTS system mannose/fructose/sorbose family IID component JQX13_06555 PF03830 PTS system sorbose subfamily IIB component JQX13_06560 PF03830 PTS system sorbose subfamily IIB component JQX13_06560 PF03610 PTS system fructose IIA component JQX13_06570 PF04717 Type VI secretion system, phage-baseplate injector JQX13_06580 PF05593 RHS Repeat JQX13_06580 PF05488 PAAR motif JQX13_06580 PF05593 RHS Repeat JQX13_06580 PF05488 PAAR motif JQX13_06595 PF03668 P-loop ATPase protein family JQX13_06600 PF07475 HPr Serine kinase C-terminal domain JQX13_06600 PF02603 HPr Serine kinase N terminus JQX13_06610 PF01230 HIT domain JQX13_06625 PF00654 Voltage gated chloride channel JQX13_06640 PF00005 ABC transporter JQX13_06645 PF00069 Protein kinase domain JQX13_06685 PF01032 FecCD transport family JQX13_06700 PF07715 TonB-dependent Receptor Plug Domain JQX13_06700 PF00593 TonB dependent receptor JQX13_06720 PF10531 SLBB domain JQX13_06725 PF00069 Protein kinase domain JQX13_06725 PF08308 PEGA domain JQX13_06730 PF00300 Histidine phosphatase superfamily (branch 1) JQX13_06735 PF12823 Domain of unknown function (DUF3817) JQX13_06760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JQX13_06760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JQX13_06760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JQX13_06780 PF13439 Glycosyltransferase Family 4 JQX13_06780 PF00534 Glycosyl transferases group 1 JQX13_06785 PF16363 GDP-mannose 4,6 dehydratase JQX13_06790 PF16363 GDP-mannose 4,6 dehydratase JQX13_06795 PF00664 ABC transporter transmembrane region JQX13_06795 PF00005 ABC transporter JQX13_06860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JQX13_06860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JQX13_06865 PF00107 Zinc-binding dehydrogenase JQX13_06865 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_06870 PF16363 GDP-mannose 4,6 dehydratase JQX13_06890 PF08003 Protein of unknown function (DUF1698) JQX13_06930 PF06715 Gp5 C-terminal repeat (3 copies) JQX13_06930 PF04717 Type VI secretion system, phage-baseplate injector JQX13_06935 PF00999 Sodium/hydrogen exchanger family JQX13_06935 PF02080 TrkA-C domain JQX13_06935 PF03471 Transporter associated domain JQX13_06940 PF00012 Hsp70 protein JQX13_06950 PF07726 ATPase family associated with various cellular activities (AAA) JQX13_06950 PF17863 AAA lid domain JQX13_06985 PF00072 Response regulator receiver domain JQX13_06985 PF00486 Transcriptional regulatory protein, C terminal JQX13_06995 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_06995 PF01915 Glycosyl hydrolase family 3 C-terminal domain JQX13_07015 PF00578 AhpC/TSA family JQX13_07030 PF00072 Response regulator receiver domain JQX13_07030 PF00486 Transcriptional regulatory protein, C terminal JQX13_07040 PF00891 O-methyltransferase domain JQX13_07045 PF01040 UbiA prenyltransferase family JQX13_07050 PF01565 FAD binding domain JQX13_07050 PF04030 D-arabinono-1,4-lactone oxidase JQX13_07055 PF00106 short chain dehydrogenase JQX13_07060 PF00672 HAMP domain JQX13_07060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_07070 PF02797 Chalcone and stilbene synthases, C-terminal domain JQX13_07070 PF00195 Chalcone and stilbene synthases, N-terminal domain JQX13_07075 PF00501 AMP-binding enzyme JQX13_07075 PF14535 AMP-binding enzyme C-terminal domain JQX13_07110 PF00069 Protein kinase domain JQX13_07140 PF03793 PASTA domain JQX13_07140 PF00069 Protein kinase domain JQX13_07160 PF01494 FAD binding domain JQX13_07165 PF00501 AMP-binding enzyme JQX13_07175 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JQX13_07180 PF00195 Chalcone and stilbene synthases, N-terminal domain JQX13_07180 PF02797 Chalcone and stilbene synthases, C-terminal domain JQX13_07200 PF12802 MarR family JQX13_07260 PF03129 Anticodon binding domain JQX13_07260 PF09180 Prolyl-tRNA synthetase, C-terminal JQX13_07260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JQX13_07345 PF00849 RNA pseudouridylate synthase JQX13_07355 PF07690 Major Facilitator Superfamily JQX13_07360 PF00916 Sulfate permease family JQX13_07360 PF01740 STAS domain JQX13_07385 PF01804 Penicillin amidase JQX13_07415 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_07415 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_07415 PF01610 Transposase JQX13_07420 PF00041 Fibronectin type III domain JQX13_07420 PF00704 Glycosyl hydrolases family 18 JQX13_07450 PF13649 Methyltransferase domain JQX13_07470 PF03793 PASTA domain JQX13_07470 PF00069 Protein kinase domain JQX13_07480 PF00005 ABC transporter JQX13_07485 PF12399 Branched-chain amino acid ATP-binding cassette transporter JQX13_07485 PF00005 ABC transporter JQX13_07490 PF02653 Branched-chain amino acid transport system / permease component JQX13_07490 PF11862 Domain of unknown function (DUF3382) JQX13_07495 PF02653 Branched-chain amino acid transport system / permease component JQX13_07510 PF00069 Protein kinase domain JQX13_07515 PF00012 Hsp70 protein JQX13_07520 PF01025 GrpE JQX13_07555 PF01494 FAD binding domain JQX13_07560 PF13378 Enolase C-terminal domain-like JQX13_07560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JQX13_07570 PF00005 ABC transporter JQX13_07570 PF13732 Domain of unknown function (DUF4162) JQX13_07585 PF00553 Cellulose binding domain JQX13_07585 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_07590 PF12706 Beta-lactamase superfamily domain JQX13_07595 PF01047 MarR family JQX13_07600 PF01969 Protein of unknown function DUF111 JQX13_07605 PF00731 AIR carboxylase JQX13_07610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JQX13_07610 PF11852 Domain of unknown function (DUF3372) JQX13_07610 PF03714 Bacterial pullanase-associated domain JQX13_07610 PF17967 Pullulanase N2 domain JQX13_07610 PF18494 Pullulanase Ins domain JQX13_07615 PF00128 Alpha amylase, catalytic domain JQX13_07635 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_07640 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_07645 PF01547 Bacterial extracellular solute-binding protein JQX13_07650 PF00005 ABC transporter JQX13_07650 PF17912 MalK OB fold domain JQX13_07655 PF16657 Maltogenic Amylase, C-terminal domain JQX13_07655 PF02903 Alpha amylase, N-terminal ig-like domain JQX13_07655 PF00128 Alpha amylase, catalytic domain JQX13_07670 PF01627 Hpt domain JQX13_07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_07670 PF07194 P2 response regulator binding domain JQX13_07670 PF02895 Signal transducing histidine kinase, homodimeric domain JQX13_07670 PF01584 CheW-like domain JQX13_07675 PF00072 Response regulator receiver domain JQX13_07680 PF01584 CheW-like domain JQX13_07685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_07685 PF13426 PAS domain JQX13_07685 PF08447 PAS fold JQX13_07690 PF00586 AIR synthase related protein, N-terminal domain JQX13_07690 PF02769 AIR synthase related protein, C-terminal domain JQX13_07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_07695 PF00512 His Kinase A (phospho-acceptor) domain JQX13_07695 PF16736 Single Cache-like JQX13_07695 PF00989 PAS fold JQX13_07700 PF00025 ADP-ribosylation factor family JQX13_07710 PF00437 Type II/IV secretion system protein JQX13_07715 PF00437 Type II/IV secretion system protein JQX13_07725 PF06733 DEAD_2 JQX13_07725 PF13307 Helicase C-terminal domain JQX13_07735 PF00072 Response regulator receiver domain JQX13_07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_07740 PF00672 HAMP domain JQX13_07740 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JQX13_07740 PF08448 PAS fold JQX13_07740 PF00512 His Kinase A (phospho-acceptor) domain JQX13_07765 PF13419 Haloacid dehalogenase-like hydrolase JQX13_07770 PF00781 Diacylglycerol kinase catalytic domain JQX13_07790 PF01628 HrcA protein C terminal domain JQX13_07790 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JQX13_07795 PF00892 EamA-like transporter family JQX13_07800 PF03951 Glutamine synthetase, beta-Grasp domain JQX13_07800 PF00120 Glutamine synthetase, catalytic domain JQX13_07835 PF07995 Glucose / Sorbosone dehydrogenase JQX13_07845 PF01965 DJ-1/PfpI family JQX13_07850 PF00999 Sodium/hydrogen exchanger family JQX13_07855 PF00027 Cyclic nucleotide-binding domain JQX13_07855 PF07885 Ion channel JQX13_07890 PF02254 TrkA-N domain JQX13_07890 PF00999 Sodium/hydrogen exchanger family JQX13_07925 PF04542 Sigma-70 region 2 JQX13_07925 PF08281 Sigma-70, region 4 JQX13_07940 PF01218 Coproporphyrinogen III oxidase JQX13_07960 PF08241 Methyltransferase domain JQX13_07960 PF12697 Alpha/beta hydrolase family JQX13_07965 PF00512 His Kinase A (phospho-acceptor) domain JQX13_07965 PF13426 PAS domain JQX13_07965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_07965 PF00672 HAMP domain JQX13_07970 PF00005 ABC transporter JQX13_07975 PF02687 FtsX-like permease family JQX13_07975 PF12704 MacB-like periplasmic core domain JQX13_08000 PF16123 Hydroxyacylglutathione hydrolase C-terminus JQX13_08000 PF00753 Metallo-beta-lactamase superfamily JQX13_08025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JQX13_08025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JQX13_08030 PF01329 Pterin 4 alpha carbinolamine dehydratase JQX13_08045 PF01546 Peptidase family M20/M25/M40 JQX13_08045 PF07687 Peptidase dimerisation domain JQX13_08050 PF08543 Phosphomethylpyrimidine kinase JQX13_08050 PF02581 Thiamine monophosphate synthase JQX13_08060 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_08065 PF00005 ABC transporter JQX13_08070 PF01979 Amidohydrolase family JQX13_08075 PF01975 Survival protein SurE JQX13_08085 PF13649 Methyltransferase domain JQX13_08100 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JQX13_08100 PF14602 Hexapeptide repeat of succinyl-transferase JQX13_08100 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_08115 PF00282 Pyridoxal-dependent decarboxylase conserved domain JQX13_08120 PF00535 Glycosyl transferase family 2 JQX13_08135 PF12704 MacB-like periplasmic core domain JQX13_08135 PF02687 FtsX-like permease family JQX13_08145 PF00005 ABC transporter JQX13_08150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JQX13_08190 PF05962 HutD JQX13_08195 PF01204 Trehalase JQX13_08200 PF07690 Major Facilitator Superfamily JQX13_08230 PF01761 3-dehydroquinate synthase JQX13_08235 PF00480 ROK family JQX13_08240 PF00107 Zinc-binding dehydrogenase JQX13_08240 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_08260 PF13419 Haloacid dehalogenase-like hydrolase JQX13_08265 PF16363 GDP-mannose 4,6 dehydratase JQX13_08270 PF00107 Zinc-binding dehydrogenase JQX13_08270 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_08280 PF01022 Bacterial regulatory protein, arsR family JQX13_08335 PF13167 GTP-binding GTPase N-terminal JQX13_08335 PF01926 50S ribosome-binding GTPase JQX13_08335 PF16360 GTP-binding GTPase Middle Region JQX13_08340 PF00881 Nitroreductase family JQX13_08345 PF03466 LysR substrate binding domain JQX13_08345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_08350 PF07859 alpha/beta hydrolase fold JQX13_08365 PF13460 NAD(P)H-binding JQX13_08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_08370 PF03466 LysR substrate binding domain JQX13_08380 PF00561 alpha/beta hydrolase fold JQX13_08385 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JQX13_08395 PF14245 Type IV pilin PilA JQX13_08395 PF07963 Prokaryotic N-terminal methylation motif JQX13_08430 PF00850 Histone deacetylase domain JQX13_08445 PF04055 Radical SAM superfamily JQX13_08445 PF12544 Lysine-2,3-aminomutase JQX13_08450 PF00248 Aldo/keto reductase family JQX13_08455 PF00583 Acetyltransferase (GNAT) family JQX13_08460 PF04055 Radical SAM superfamily JQX13_08460 PF13186 Iron-sulfur cluster-binding domain JQX13_08545 PF01433 Peptidase family M1 domain JQX13_08545 PF11838 ERAP1-like C-terminal domain JQX13_08560 PF08308 PEGA domain JQX13_08560 PF00069 Protein kinase domain JQX13_08570 PF12679 ABC-2 family transporter protein JQX13_08575 PF00005 ABC transporter JQX13_08580 PF00561 alpha/beta hydrolase fold JQX13_08590 PF02261 Aspartate decarboxylase JQX13_08610 PF00158 Sigma-54 interaction domain JQX13_08610 PF02954 Bacterial regulatory protein, Fis family JQX13_08610 PF00072 Response regulator receiver domain JQX13_08630 PF13419 Haloacid dehalogenase-like hydrolase JQX13_08635 PF00085 Thioredoxin JQX13_08640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_08650 PF02540 NAD synthase JQX13_08650 PF00795 Carbon-nitrogen hydrolase JQX13_08655 PF05362 Lon protease (S16) C-terminal proteolytic domain JQX13_08655 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_08655 PF02190 ATP-dependent protease La (LON) substrate-binding domain JQX13_08665 PF08447 PAS fold JQX13_08665 PF13493 Domain of unknown function (DUF4118) JQX13_08665 PF13426 PAS domain JQX13_08665 PF00989 PAS fold JQX13_08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_08665 PF00512 His Kinase A (phospho-acceptor) domain JQX13_08675 PF13419 Haloacid dehalogenase-like hydrolase JQX13_08695 PF00437 Type II/IV secretion system protein JQX13_08695 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JQX13_08700 PF08448 PAS fold JQX13_08700 PF08447 PAS fold JQX13_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_08705 PF00512 His Kinase A (phospho-acceptor) domain JQX13_08750 PF00486 Transcriptional regulatory protein, C terminal JQX13_08750 PF00072 Response regulator receiver domain JQX13_08755 PF01926 50S ribosome-binding GTPase JQX13_08755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JQX13_08770 PF01389 OmpA-like transmembrane domain JQX13_08770 PF00691 OmpA family JQX13_08805 PF00106 short chain dehydrogenase JQX13_08810 PF00672 HAMP domain JQX13_08810 PF13426 PAS domain JQX13_08810 PF00512 His Kinase A (phospho-acceptor) domain JQX13_08810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_08815 PF00072 Response regulator receiver domain JQX13_08815 PF00486 Transcriptional regulatory protein, C terminal JQX13_08820 PF01339 CheB methylesterase JQX13_08820 PF00072 Response regulator receiver domain JQX13_08825 PF01739 CheR methyltransferase, SAM binding domain JQX13_08825 PF03705 CheR methyltransferase, all-alpha domain JQX13_08830 PF12729 Four helix bundle sensory module for signal transduction JQX13_08830 PF00672 HAMP domain JQX13_08830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_08835 PF01584 CheW-like domain JQX13_08840 PF00672 HAMP domain JQX13_08840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_08840 PF02203 Tar ligand binding domain homologue JQX13_08845 PF01584 CheW-like domain JQX13_08845 PF02895 Signal transducing histidine kinase, homodimeric domain JQX13_08845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_08845 PF01627 Hpt domain JQX13_08845 PF07194 P2 response regulator binding domain JQX13_08850 PF00158 Sigma-54 interaction domain JQX13_08850 PF00072 Response regulator receiver domain JQX13_08850 PF02954 Bacterial regulatory protein, Fis family JQX13_08855 PF00512 His Kinase A (phospho-acceptor) domain JQX13_08855 PF00989 PAS fold JQX13_08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_08860 PF00999 Sodium/hydrogen exchanger family JQX13_08860 PF02080 TrkA-C domain JQX13_08860 PF03471 Transporter associated domain JQX13_08865 PF10396 GTP-binding protein TrmE N-terminus JQX13_08865 PF12631 MnmE helical domain JQX13_08865 PF01926 50S ribosome-binding GTPase JQX13_08870 PF01551 Peptidase family M23 JQX13_08870 PF08460 Bacterial SH3 domain JQX13_08885 PF01230 HIT domain JQX13_08890 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JQX13_08890 PF00326 Prolyl oligopeptidase family JQX13_08895 PF00501 AMP-binding enzyme JQX13_08900 PF01554 MatE JQX13_08910 PF01654 Cytochrome bd terminal oxidase subunit I JQX13_08925 PF03747 ADP-ribosylglycohydrolase JQX13_08935 PF02082 Transcriptional regulator JQX13_08940 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_08940 PF00970 Oxidoreductase FAD-binding domain JQX13_08940 PF00175 Oxidoreductase NAD-binding domain JQX13_08945 PF01152 Bacterial-like globin JQX13_08950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JQX13_08960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQX13_08960 PF02874 ATP synthase alpha/beta family, beta-barrel domain JQX13_08965 PF00231 ATP synthase JQX13_08970 PF00486 Transcriptional regulatory protein, C terminal JQX13_08970 PF00072 Response regulator receiver domain JQX13_08975 PF02698 DUF218 domain JQX13_08985 PF01594 AI-2E family transporter JQX13_09005 PF00085 Thioredoxin JQX13_09020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JQX13_09020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JQX13_09045 PF01066 CDP-alcohol phosphatidyltransferase JQX13_09060 PF00300 Histidine phosphatase superfamily (branch 1) JQX13_09085 PF03466 LysR substrate binding domain JQX13_09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_09090 PF00248 Aldo/keto reductase family JQX13_09100 PF00561 alpha/beta hydrolase fold JQX13_09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_09105 PF03466 LysR substrate binding domain JQX13_09110 PF00171 Aldehyde dehydrogenase family JQX13_09125 PF04228 Putative neutral zinc metallopeptidase JQX13_09130 PF00293 NUDIX domain JQX13_09130 PF09297 NADH pyrophosphatase zinc ribbon domain JQX13_09180 PF00005 ABC transporter JQX13_09190 PF00248 Aldo/keto reductase family JQX13_09220 PF01593 Flavin containing amine oxidoreductase JQX13_09235 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09240 PF01584 CheW-like domain JQX13_09245 PF01739 CheR methyltransferase, SAM binding domain JQX13_09255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_09255 PF00672 HAMP domain JQX13_09255 PF02743 Cache domain JQX13_09260 PF00072 Response regulator receiver domain JQX13_09260 PF01627 Hpt domain JQX13_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09260 PF01584 CheW-like domain JQX13_09265 PF01339 CheB methylesterase JQX13_09265 PF00072 Response regulator receiver domain JQX13_09270 PF00989 PAS fold JQX13_09270 PF00672 HAMP domain JQX13_09270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09270 PF18698 Histidine kinase sensor domain JQX13_09270 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09280 PF00232 Glycosyl hydrolase family 1 JQX13_09295 PF01739 CheR methyltransferase, SAM binding domain JQX13_09295 PF03705 CheR methyltransferase, all-alpha domain JQX13_09300 PF01584 CheW-like domain JQX13_09305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_09305 PF16591 Helical bimodular sensor domain JQX13_09305 PF00672 HAMP domain JQX13_09310 PF00672 HAMP domain JQX13_09310 PF02203 Tar ligand binding domain homologue JQX13_09310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_09315 PF01627 Hpt domain JQX13_09315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09315 PF02895 Signal transducing histidine kinase, homodimeric domain JQX13_09315 PF01584 CheW-like domain JQX13_09315 PF07194 P2 response regulator binding domain JQX13_09325 PF00486 Transcriptional regulatory protein, C terminal JQX13_09325 PF00072 Response regulator receiver domain JQX13_09330 PF00072 Response regulator receiver domain JQX13_09335 PF03091 CutA1 divalent ion tolerance protein JQX13_09340 PF00326 Prolyl oligopeptidase family JQX13_09350 PF03741 Integral membrane protein TerC family JQX13_09370 PF01475 Ferric uptake regulator family JQX13_09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09390 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09395 PF00271 Helicase conserved C-terminal domain JQX13_09395 PF00270 DEAD/DEAH box helicase JQX13_09420 PF07681 DoxX JQX13_09425 PF00989 PAS fold JQX13_09425 PF00672 HAMP domain JQX13_09425 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09425 PF18698 Histidine kinase sensor domain JQX13_09450 PF00486 Transcriptional regulatory protein, C terminal JQX13_09450 PF00072 Response regulator receiver domain JQX13_09475 PF01554 MatE JQX13_09485 PF00012 Hsp70 protein JQX13_09490 PF00213 ATP synthase delta (OSCP) subunit JQX13_09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09495 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09495 PF00672 HAMP domain JQX13_09495 PF16750 Sensor domain of 2-component histidine kinase JQX13_09500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQX13_09500 PF00306 ATP synthase alpha/beta chain, C terminal domain JQX13_09500 PF02874 ATP synthase alpha/beta family, beta-barrel domain JQX13_09520 PF00158 Sigma-54 interaction domain JQX13_09520 PF00072 Response regulator receiver domain JQX13_09520 PF02954 Bacterial regulatory protein, Fis family JQX13_09530 PF08359 YsiA-like protein, C-terminal region JQX13_09530 PF00440 Bacterial regulatory proteins, tetR family JQX13_09550 PF14602 Hexapeptide repeat of succinyl-transferase JQX13_09550 PF12804 MobA-like NTP transferase domain JQX13_09550 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_09580 PF02810 SEC-C motif JQX13_09580 PF07517 SecA DEAD-like domain JQX13_09580 PF01043 SecA preprotein cross-linking domain JQX13_09580 PF07516 SecA Wing and Scaffold domain JQX13_09640 PF13460 NAD(P)H-binding JQX13_09660 PF02423 Ornithine cyclodeaminase/mu-crystallin family JQX13_09665 PF01590 GAF domain JQX13_09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09665 PF08446 PAS fold JQX13_09665 PF00360 Phytochrome region JQX13_09665 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09705 PF12706 Beta-lactamase superfamily domain JQX13_09715 PF00155 Aminotransferase class I and II JQX13_09715 PF00392 Bacterial regulatory proteins, gntR family JQX13_09720 PF00892 EamA-like transporter family JQX13_09725 PF00557 Metallopeptidase family M24 JQX13_09815 PF01739 CheR methyltransferase, SAM binding domain JQX13_09815 PF03705 CheR methyltransferase, all-alpha domain JQX13_09840 PF01738 Dienelactone hydrolase family JQX13_09845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_09845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JQX13_09850 PF09308 LuxQ, periplasmic JQX13_09850 PF00072 Response regulator receiver domain JQX13_09850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09850 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09855 PF00072 Response regulator receiver domain JQX13_09855 PF09456 RcsC Alpha-Beta-Loop (ABL) JQX13_09855 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09915 PF05593 RHS Repeat JQX13_09915 PF03527 RHS protein JQX13_09920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09925 PF08448 PAS fold JQX13_09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_09925 PF00072 Response regulator receiver domain JQX13_09925 PF13188 PAS domain JQX13_09925 PF00512 His Kinase A (phospho-acceptor) domain JQX13_09930 PF00083 Sugar (and other) transporter JQX13_09945 PF04264 YceI-like domain JQX13_09950 PF03466 LysR substrate binding domain JQX13_09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_09955 PF05726 Pirin C-terminal cupin domain JQX13_09955 PF02678 Pirin JQX13_09965 PF00355 Rieske [2Fe-2S] domain JQX13_10005 PF00994 Probable molybdopterin binding domain JQX13_10005 PF02464 Competence-damaged protein JQX13_10020 PF13193 AMP-binding enzyme C-terminal domain JQX13_10020 PF00501 AMP-binding enzyme JQX13_10025 PF06745 KaiC JQX13_10030 PF00072 Response regulator receiver domain JQX13_10035 PF00929 Exonuclease JQX13_10045 PF00156 Phosphoribosyl transferase domain JQX13_10045 PF01738 Dienelactone hydrolase family JQX13_10050 PF00156 Phosphoribosyl transferase domain JQX13_10050 PF05139 Erythromycin esterase JQX13_10055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JQX13_10055 PF14572 Phosphoribosyl synthetase-associated domain JQX13_10070 PF00378 Enoyl-CoA hydratase/isomerase JQX13_10080 PF01433 Peptidase family M1 domain JQX13_10080 PF11838 ERAP1-like C-terminal domain JQX13_10085 PF03279 Bacterial lipid A biosynthesis acyltransferase JQX13_10090 PF00149 Calcineurin-like phosphoesterase JQX13_10110 PF12833 Helix-turn-helix domain JQX13_10120 PF00085 Thioredoxin JQX13_10125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JQX13_10125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JQX13_10130 PF05139 Erythromycin esterase JQX13_10130 PF00156 Phosphoribosyl transferase domain JQX13_10135 PF01112 Asparaginase JQX13_10140 PF01209 ubiE/COQ5 methyltransferase family JQX13_10145 PF00067 Cytochrome P450 JQX13_10150 PF13302 Acetyltransferase (GNAT) domain JQX13_10165 PF03793 PASTA domain JQX13_10165 PF00069 Protein kinase domain JQX13_10175 PF00155 Aminotransferase class I and II JQX13_10175 PF00392 Bacterial regulatory proteins, gntR family JQX13_10180 PF03793 PASTA domain JQX13_10180 PF00069 Protein kinase domain JQX13_10185 PF00067 Cytochrome P450 JQX13_10190 PF00171 Aldehyde dehydrogenase family JQX13_10195 PF00205 Thiamine pyrophosphate enzyme, central domain JQX13_10195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQX13_10195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQX13_10200 PF03466 LysR substrate binding domain JQX13_10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_10215 PF13360 PQQ-like domain JQX13_10215 PF00069 Protein kinase domain JQX13_10220 PF02954 Bacterial regulatory protein, Fis family JQX13_10220 PF00072 Response regulator receiver domain JQX13_10220 PF00158 Sigma-54 interaction domain JQX13_10230 PF00582 Universal stress protein family JQX13_10235 PF00582 Universal stress protein family JQX13_10250 PF00672 HAMP domain JQX13_10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_10250 PF00512 His Kinase A (phospho-acceptor) domain JQX13_10255 PF02872 5'-nucleotidase, C-terminal domain JQX13_10255 PF00149 Calcineurin-like phosphoesterase JQX13_10280 PF03793 PASTA domain JQX13_10280 PF00069 Protein kinase domain JQX13_10295 PF13847 Methyltransferase domain JQX13_10295 PF03551 Transcriptional regulator PadR-like family JQX13_10300 PF12852 Cupin JQX13_10300 PF12833 Helix-turn-helix domain JQX13_10305 PF00561 alpha/beta hydrolase fold JQX13_10310 PF01494 FAD binding domain JQX13_10315 PF00440 Bacterial regulatory proteins, tetR family JQX13_10315 PF08361 MAATS-type transcriptional repressor, C-terminal region JQX13_10320 PF03466 LysR substrate binding domain JQX13_10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_10325 PF00043 Glutathione S-transferase, C-terminal domain JQX13_10325 PF02798 Glutathione S-transferase, N-terminal domain JQX13_10335 PF12706 Beta-lactamase superfamily domain JQX13_10340 PF17932 Tetracyclin repressor-like, C-terminal domain JQX13_10340 PF00440 Bacterial regulatory proteins, tetR family JQX13_10350 PF00989 PAS fold JQX13_10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_10350 PF00512 His Kinase A (phospho-acceptor) domain JQX13_10350 PF18698 Histidine kinase sensor domain JQX13_10350 PF00672 HAMP domain JQX13_10370 PF00202 Aminotransferase class-III JQX13_10380 PF07977 FabA-like domain JQX13_10385 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_10385 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_10395 PF13193 AMP-binding enzyme C-terminal domain JQX13_10395 PF00501 AMP-binding enzyme JQX13_10400 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_10400 PF00107 Zinc-binding dehydrogenase JQX13_10410 PF01965 DJ-1/PfpI family JQX13_10410 PF12833 Helix-turn-helix domain JQX13_10415 PF01965 DJ-1/PfpI family JQX13_10425 PF03466 LysR substrate binding domain JQX13_10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_10455 PF00248 Aldo/keto reductase family JQX13_10460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JQX13_10460 PF12833 Helix-turn-helix domain JQX13_10460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JQX13_10460 PF02805 Metal binding domain of Ada JQX13_10465 PF00293 NUDIX domain JQX13_10465 PF01467 Cytidylyltransferase-like JQX13_10475 PF04754 Putative transposase, YhgA-like JQX13_10480 PF12833 Helix-turn-helix domain JQX13_10480 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JQX13_10485 PF00534 Glycosyl transferases group 1 JQX13_10485 PF13439 Glycosyltransferase Family 4 JQX13_10490 PF00942 Cellulose binding domain JQX13_10490 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_10490 PF00331 Glycosyl hydrolase family 10 JQX13_10530 PF13188 PAS domain JQX13_10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_10530 PF08448 PAS fold JQX13_10530 PF00072 Response regulator receiver domain JQX13_10530 PF00512 His Kinase A (phospho-acceptor) domain JQX13_10535 PF02386 Cation transport protein JQX13_10565 PF07516 SecA Wing and Scaffold domain JQX13_10565 PF07517 SecA DEAD-like domain JQX13_10565 PF01043 SecA preprotein cross-linking domain JQX13_10565 PF02810 SEC-C motif JQX13_10575 PF03060 Nitronate monooxygenase JQX13_10590 PF02983 Alpha-lytic protease prodomain JQX13_10600 PF04542 Sigma-70 region 2 JQX13_10600 PF08281 Sigma-70, region 4 JQX13_10620 PF00722 Glycosyl hydrolases family 16 JQX13_10625 PF13302 Acetyltransferase (GNAT) domain JQX13_10635 PF13460 NAD(P)H-binding JQX13_10655 PF00067 Cytochrome P450 JQX13_10665 PF00691 OmpA family JQX13_10675 PF00072 Response regulator receiver domain JQX13_10675 PF01339 CheB methylesterase JQX13_10685 PF00437 Type II/IV secretion system protein JQX13_10690 PF00034 Cytochrome c JQX13_10690 PF03150 Di-haem cytochrome c peroxidase JQX13_10695 PF02632 BioY family JQX13_10700 PF02361 Cobalt transport protein JQX13_10705 PF00005 ABC transporter JQX13_10710 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_10725 PF02463 RecF/RecN/SMC N terminal domain JQX13_10745 PF13188 PAS domain JQX13_10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_10745 PF13426 PAS domain JQX13_10750 PF13640 2OG-Fe(II) oxygenase superfamily JQX13_10750 PF18331 PKHD-type hydroxylase C-terminal domain JQX13_10765 PF00593 TonB dependent receptor JQX13_10765 PF07715 TonB-dependent Receptor Plug Domain JQX13_10785 PF00069 Protein kinase domain JQX13_10785 PF03793 PASTA domain JQX13_10795 PF00069 Protein kinase domain JQX13_10800 PF00158 Sigma-54 interaction domain JQX13_10800 PF00072 Response regulator receiver domain JQX13_10825 PF00313 'Cold-shock' DNA-binding domain JQX13_10855 PF00069 Protein kinase domain JQX13_10870 PF00072 Response regulator receiver domain JQX13_10880 PF00563 EAL domain JQX13_10880 PF00990 Diguanylate cyclase, GGDEF domain JQX13_10880 PF03707 Bacterial signalling protein N terminal repeat JQX13_10895 PF01593 Flavin containing amine oxidoreductase JQX13_10920 PF03601 Conserved hypothetical protein 698 JQX13_10925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_10925 PF03466 LysR substrate binding domain JQX13_10930 PF13380 CoA binding domain JQX13_10930 PF13607 Succinyl-CoA ligase like flavodoxin domain JQX13_10955 PF00144 Beta-lactamase JQX13_10975 PF03793 PASTA domain JQX13_10975 PF00069 Protein kinase domain JQX13_10980 PF01381 Helix-turn-helix JQX13_10990 PF03793 PASTA domain JQX13_10990 PF00069 Protein kinase domain JQX13_11050 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_11050 PF01348 Type II intron maturase JQX13_11060 PF14659 Phage integrase, N-terminal SAM-like domain JQX13_11060 PF00589 Phage integrase family JQX13_11105 PF01965 DJ-1/PfpI family JQX13_11135 PF06441 Epoxide hydrolase N terminus JQX13_11155 PF12833 Helix-turn-helix domain JQX13_11170 PF00942 Cellulose binding domain JQX13_11200 PF00326 Prolyl oligopeptidase family JQX13_11200 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JQX13_11205 PF06441 Epoxide hydrolase N terminus JQX13_11235 PF00069 Protein kinase domain JQX13_11235 PF03793 PASTA domain JQX13_11250 PF00305 Lipoxygenase JQX13_11260 PF00305 Lipoxygenase JQX13_11285 PF00384 Molybdopterin oxidoreductase JQX13_11285 PF01568 Molydopterin dinucleotide binding domain JQX13_11285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JQX13_11290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JQX13_11290 PF01568 Molydopterin dinucleotide binding domain JQX13_11290 PF00384 Molybdopterin oxidoreductase JQX13_11305 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_11335 PF02954 Bacterial regulatory protein, Fis family JQX13_11335 PF00158 Sigma-54 interaction domain JQX13_11335 PF06505 Activator of aromatic catabolism JQX13_11335 PF02830 V4R domain JQX13_11365 PF17885 Styrene monooxygenase A putative substrate binding domain JQX13_11390 PF01510 N-acetylmuramoyl-L-alanine amidase JQX13_11395 PF13286 Phosphohydrolase-associated domain JQX13_11395 PF01966 HD domain JQX13_11415 PF08281 Sigma-70, region 4 JQX13_11415 PF04542 Sigma-70 region 2 JQX13_11425 PF00082 Subtilase family JQX13_11425 PF05922 Peptidase inhibitor I9 JQX13_11430 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JQX13_11430 PF01266 FAD dependent oxidoreductase JQX13_11445 PF01627 Hpt domain JQX13_11445 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11445 PF00072 Response regulator receiver domain JQX13_11445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_11445 PF00672 HAMP domain JQX13_11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11455 PF01739 CheR methyltransferase, SAM binding domain JQX13_11505 PF01590 GAF domain JQX13_11505 PF02954 Bacterial regulatory protein, Fis family JQX13_11505 PF00158 Sigma-54 interaction domain JQX13_11535 PF13005 zinc-finger binding domain of transposase IS66 JQX13_11535 PF13007 Transposase C of IS166 homeodomain JQX13_11535 PF13817 IS66 C-terminal element JQX13_11535 PF03050 Transposase IS66 family JQX13_11585 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11590 PF00072 Response regulator receiver domain JQX13_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11595 PF00360 Phytochrome region JQX13_11595 PF08446 PAS fold JQX13_11595 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11595 PF01590 GAF domain JQX13_11600 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11600 PF02743 Cache domain JQX13_11610 PF00712 DNA polymerase III beta subunit, N-terminal domain JQX13_11610 PF02768 DNA polymerase III beta subunit, C-terminal domain JQX13_11610 PF02767 DNA polymerase III beta subunit, central domain JQX13_11615 PF01641 SelR domain JQX13_11635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11635 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11665 PF01627 Hpt domain JQX13_11665 PF00072 Response regulator receiver domain JQX13_11665 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11665 PF00672 HAMP domain JQX13_11665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_11670 PF00072 Response regulator receiver domain JQX13_11670 PF09308 LuxQ, periplasmic JQX13_11670 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11680 PF17200 Single Cache domain 2 JQX13_11680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_11680 PF00672 HAMP domain JQX13_11690 PF00550 Phosphopantetheine attachment site JQX13_11690 PF14765 Polyketide synthase dehydratase JQX13_11690 PF08659 KR domain JQX13_11690 PF00698 Acyl transferase domain JQX13_11690 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_11690 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_11690 PF08990 Erythronolide synthase docking JQX13_11690 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_11690 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_11705 PF01979 Amidohydrolase family JQX13_11715 PF01168 Alanine racemase, N-terminal domain JQX13_11715 PF00842 Alanine racemase, C-terminal domain JQX13_11735 PF00561 alpha/beta hydrolase fold JQX13_11745 PF00561 alpha/beta hydrolase fold JQX13_11760 PF13193 AMP-binding enzyme C-terminal domain JQX13_11760 PF00501 AMP-binding enzyme JQX13_11765 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JQX13_11765 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JQX13_11785 PF05922 Peptidase inhibitor I9 JQX13_11785 PF00082 Subtilase family JQX13_11790 PF01790 Prolipoprotein diacylglyceryl transferase JQX13_11795 PF01209 ubiE/COQ5 methyltransferase family JQX13_11805 PF07690 Major Facilitator Superfamily JQX13_11810 PF00581 Rhodanese-like domain JQX13_11815 PF01272 Transcription elongation factor, GreA/GreB, C-term JQX13_11815 PF03449 Transcription elongation factor, N-terminal JQX13_11820 PF00672 HAMP domain JQX13_11820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11820 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11820 PF00072 Response regulator receiver domain JQX13_11820 PF01627 Hpt domain JQX13_11820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_11825 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11825 PF00672 HAMP domain JQX13_11825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11825 PF13426 PAS domain JQX13_11830 PF00072 Response regulator receiver domain JQX13_11830 PF13188 PAS domain JQX13_11830 PF08448 PAS fold JQX13_11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_11830 PF00512 His Kinase A (phospho-acceptor) domain JQX13_11850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JQX13_11850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JQX13_11850 PF00378 Enoyl-CoA hydratase/isomerase JQX13_11895 PF00892 EamA-like transporter family JQX13_11910 PF01435 Peptidase family M48 JQX13_11925 PF02541 Ppx/GppA phosphatase family JQX13_11970 PF13409 Glutathione S-transferase, N-terminal domain JQX13_12025 PF03793 PASTA domain JQX13_12025 PF00069 Protein kinase domain JQX13_12035 PF02954 Bacterial regulatory protein, Fis family JQX13_12035 PF00072 Response regulator receiver domain JQX13_12035 PF00158 Sigma-54 interaction domain JQX13_12045 PF00440 Bacterial regulatory proteins, tetR family JQX13_12045 PF13977 BetI-type transcriptional repressor, C-terminal JQX13_12050 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12055 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_12060 PF00005 ABC transporter JQX13_12065 PF03793 PASTA domain JQX13_12065 PF00069 Protein kinase domain JQX13_12070 PF10518 TAT (twin-arginine translocation) pathway signal sequence JQX13_12070 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_12070 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding JQX13_12075 PF02954 Bacterial regulatory protein, Fis family JQX13_12075 PF00158 Sigma-54 interaction domain JQX13_12075 PF00072 Response regulator receiver domain JQX13_12080 PF00753 Metallo-beta-lactamase superfamily JQX13_12085 PF12729 Four helix bundle sensory module for signal transduction JQX13_12085 PF00672 HAMP domain JQX13_12085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_12095 PF02954 Bacterial regulatory protein, Fis family JQX13_12095 PF00072 Response regulator receiver domain JQX13_12095 PF00158 Sigma-54 interaction domain JQX13_12100 PF12728 Helix-turn-helix domain JQX13_12115 PF00672 HAMP domain JQX13_12115 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12115 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JQX13_12115 PF08448 PAS fold JQX13_12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12120 PF02702 Osmosensitive K+ channel His kinase sensor domain JQX13_12125 PF02669 K+-transporting ATPase, c chain JQX13_12135 PF03814 Potassium-transporting ATPase A subunit JQX13_12150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JQX13_12155 PF06167 Glucose-regulated metallo-peptidase M90 JQX13_12200 PF02146 Sir2 family JQX13_12215 PF00158 Sigma-54 interaction domain JQX13_12215 PF00072 Response regulator receiver domain JQX13_12215 PF02954 Bacterial regulatory protein, Fis family JQX13_12220 PF13188 PAS domain JQX13_12220 PF08448 PAS fold JQX13_12220 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12220 PF00072 Response regulator receiver domain JQX13_12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JQX13_12240 PF00128 Alpha amylase, catalytic domain JQX13_12260 PF00106 short chain dehydrogenase JQX13_12270 PF00561 alpha/beta hydrolase fold JQX13_12280 PF07731 Multicopper oxidase JQX13_12280 PF07732 Multicopper oxidase JQX13_12285 PF01842 ACT domain JQX13_12285 PF00696 Amino acid kinase family JQX13_12285 PF13840 ACT domain JQX13_12290 PF01791 DeoC/LacD family aldolase JQX13_12295 PF01959 3-dehydroquinate synthase II JQX13_12300 PF14535 AMP-binding enzyme C-terminal domain JQX13_12300 PF00501 AMP-binding enzyme JQX13_12310 PF14535 AMP-binding enzyme C-terminal domain JQX13_12310 PF00501 AMP-binding enzyme JQX13_12320 PF01220 Dehydroquinase class II JQX13_12340 PF00672 HAMP domain JQX13_12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12340 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JQX13_12360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JQX13_12370 PF00497 Bacterial extracellular solute-binding proteins, family 3 JQX13_12380 PF00082 Subtilase family JQX13_12380 PF05922 Peptidase inhibitor I9 JQX13_12425 PF02463 RecF/RecN/SMC N terminal domain JQX13_12445 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_12470 PF00675 Insulinase (Peptidase family M16) JQX13_12470 PF05193 Peptidase M16 inactive domain JQX13_12475 PF00067 Cytochrome P450 JQX13_12480 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_12480 PF13191 AAA ATPase domain JQX13_12500 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12500 PF08448 PAS fold JQX13_12500 PF13188 PAS domain JQX13_12500 PF00072 Response regulator receiver domain JQX13_12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12505 PF08447 PAS fold JQX13_12505 PF08448 PAS fold JQX13_12515 PF04650 YSIRK type signal peptide JQX13_12525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQX13_12540 PF01434 Peptidase family M41 JQX13_12540 PF17862 AAA+ lid domain JQX13_12540 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_12540 PF06480 FtsH Extracellular JQX13_12550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JQX13_12590 PF13091 PLD-like domain JQX13_12590 PF13396 Phospholipase_D-nuclease N-terminal JQX13_12600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_12615 PF03949 Malic enzyme, NAD binding domain JQX13_12615 PF00390 Malic enzyme, N-terminal domain JQX13_12620 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12620 PF00360 Phytochrome region JQX13_12620 PF01590 GAF domain JQX13_12620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12620 PF08446 PAS fold JQX13_12625 PF00672 HAMP domain JQX13_12625 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12625 PF01627 Hpt domain JQX13_12625 PF00072 Response regulator receiver domain JQX13_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12645 PF13188 PAS domain JQX13_12645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12645 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12645 PF08448 PAS fold JQX13_12645 PF00072 Response regulator receiver domain JQX13_12665 PF00672 HAMP domain JQX13_12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_12665 PF18698 Histidine kinase sensor domain JQX13_12665 PF00989 PAS fold JQX13_12665 PF00512 His Kinase A (phospho-acceptor) domain JQX13_12670 PF00291 Pyridoxal-phosphate dependent enzyme JQX13_12680 PF01636 Phosphotransferase enzyme family JQX13_12685 PF00501 AMP-binding enzyme JQX13_12685 PF13193 AMP-binding enzyme C-terminal domain JQX13_12690 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_12690 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_12690 PF08659 KR domain JQX13_12690 PF14765 Polyketide synthase dehydratase JQX13_12690 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_12690 PF00698 Acyl transferase domain JQX13_12690 PF08990 Erythronolide synthase docking JQX13_12690 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_12690 PF00550 Phosphopantetheine attachment site JQX13_12695 PF07690 Major Facilitator Superfamily JQX13_12715 PF01555 DNA methylase JQX13_12720 PF00089 Trypsin JQX13_12730 PF00067 Cytochrome P450 JQX13_12735 PF02358 Trehalose-phosphatase JQX13_12735 PF03636 Glycosyl hydrolase family 65, N-terminal domain JQX13_12735 PF03632 Glycosyl hydrolase family 65 central catalytic domain JQX13_12735 PF03633 Glycosyl hydrolase family 65, C-terminal domain JQX13_12745 PF02397 Bacterial sugar transferase JQX13_12780 PF00072 Response regulator receiver domain JQX13_12805 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_12810 PF12891 Glycoside hydrolase family 44 JQX13_12810 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_12810 PF00942 Cellulose binding domain JQX13_12815 PF08264 Anticodon-binding domain of tRNA JQX13_12815 PF00133 tRNA synthetases class I (I, L, M and V) JQX13_12835 PF00144 Beta-lactamase JQX13_12915 PF13665 Domain of unknown function (DUF4150) JQX13_12915 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_12925 PF13007 Transposase C of IS166 homeodomain JQX13_12925 PF03050 Transposase IS66 family JQX13_12925 PF13005 zinc-finger binding domain of transposase IS66 JQX13_12925 PF13817 IS66 C-terminal element JQX13_12940 PF00722 Glycosyl hydrolases family 16 JQX13_13000 PF07729 FCD domain JQX13_13000 PF00392 Bacterial regulatory proteins, gntR family JQX13_13005 PF01557 Fumarylacetoacetate (FAA) hydrolase family JQX13_13015 PF01522 Polysaccharide deacetylase JQX13_13025 PF01053 Cys/Met metabolism PLP-dependent enzyme JQX13_13070 PF00455 DeoR C terminal sensor domain JQX13_13070 PF08220 DeoR-like helix-turn-helix domain JQX13_13075 PF13419 Haloacid dehalogenase-like hydrolase JQX13_13080 PF01047 MarR family JQX13_13085 PF02678 Pirin JQX13_13085 PF05726 Pirin C-terminal cupin domain JQX13_13100 PF00128 Alpha amylase, catalytic domain JQX13_13135 PF07995 Glucose / Sorbosone dehydrogenase JQX13_13195 PF07714 Protein tyrosine kinase JQX13_13265 PF01757 Acyltransferase family JQX13_13270 PF03808 Glycosyl transferase WecB/TagA/CpsF family JQX13_13275 PF01425 Amidase JQX13_13280 PF02225 PA domain JQX13_13280 PF04389 Peptidase family M28 JQX13_13285 PF00582 Universal stress protein family JQX13_13295 PF00657 GDSL-like Lipase/Acylhydrolase JQX13_13295 PF17996 Carbohydrate esterase 2 N-terminal JQX13_13295 PF00404 Dockerin type I domain JQX13_13295 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_13300 PF00082 Subtilase family JQX13_13300 PF05922 Peptidase inhibitor I9 JQX13_13305 PF00326 Prolyl oligopeptidase family JQX13_13305 PF07676 WD40-like Beta Propeller Repeat JQX13_13310 PF00484 Carbonic anhydrase JQX13_13315 PF01062 Bestrophin, RFP-TM, chloride channel JQX13_13330 PF00069 Protein kinase domain JQX13_13330 PF03793 PASTA domain JQX13_13340 PF06480 FtsH Extracellular JQX13_13340 PF17862 AAA+ lid domain JQX13_13340 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_13340 PF01434 Peptidase family M41 JQX13_13375 PF00069 Protein kinase domain JQX13_13375 PF03793 PASTA domain JQX13_13405 PF01139 tRNA-splicing ligase RtcB JQX13_13425 PF04389 Peptidase family M28 JQX13_13435 PF02163 Peptidase family M50 JQX13_13440 PF00753 Metallo-beta-lactamase superfamily JQX13_13465 PF02698 DUF218 domain JQX13_13490 PF01610 Transposase JQX13_13490 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_13490 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_13510 PF01844 HNH endonuclease JQX13_13530 PF00069 Protein kinase domain JQX13_13530 PF03793 PASTA domain JQX13_13545 PF07690 Major Facilitator Superfamily JQX13_13565 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_13580 PF00400 WD domain, G-beta repeat JQX13_13580 PF12894 Anaphase-promoting complex subunit 4 WD40 domain JQX13_13595 PF00723 Glycosyl hydrolases family 15 JQX13_13605 PF00107 Zinc-binding dehydrogenase JQX13_13605 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_13615 PF01638 HxlR-like helix-turn-helix JQX13_13620 PF00881 Nitroreductase family JQX13_13645 PF07690 Major Facilitator Superfamily JQX13_13700 PF02371 Transposase IS116/IS110/IS902 family JQX13_13700 PF01548 Transposase JQX13_13710 PF03466 LysR substrate binding domain JQX13_13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_13715 PF00248 Aldo/keto reductase family JQX13_13720 PF00698 Acyl transferase domain JQX13_13720 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_13720 PF00550 Phosphopantetheine attachment site JQX13_13720 PF00107 Zinc-binding dehydrogenase JQX13_13720 PF08659 KR domain JQX13_13720 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_13720 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_13720 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_13720 PF14765 Polyketide synthase dehydratase JQX13_13745 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_13745 PF13665 Domain of unknown function (DUF4150) JQX13_13760 PF13665 Domain of unknown function (DUF4150) JQX13_13760 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_13775 PF13665 Domain of unknown function (DUF4150) JQX13_13775 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_13785 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_13785 PF13665 Domain of unknown function (DUF4150) JQX13_13810 PF00069 Protein kinase domain JQX13_13815 PF07885 Ion channel JQX13_13815 PF00027 Cyclic nucleotide-binding domain JQX13_13825 PF00144 Beta-lactamase JQX13_13830 PF00905 Penicillin binding protein transpeptidase domain JQX13_13845 PF00067 Cytochrome P450 JQX13_13850 PF00561 alpha/beta hydrolase fold JQX13_13855 PF00672 HAMP domain JQX13_13855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_13865 PF00672 HAMP domain JQX13_13865 PF12729 Four helix bundle sensory module for signal transduction JQX13_13865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_13870 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_13870 PF02839 Carbohydrate binding domain JQX13_13890 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_13890 PF00107 Zinc-binding dehydrogenase JQX13_13925 PF00069 Protein kinase domain JQX13_13930 PF00082 Subtilase family JQX13_13930 PF05922 Peptidase inhibitor I9 JQX13_13945 PF00672 HAMP domain JQX13_13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_13945 PF00512 His Kinase A (phospho-acceptor) domain JQX13_13945 PF13426 PAS domain JQX13_13955 PF13417 Glutathione S-transferase, N-terminal domain JQX13_13985 PF08361 MAATS-type transcriptional repressor, C-terminal region JQX13_13985 PF00440 Bacterial regulatory proteins, tetR family JQX13_13995 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JQX13_13995 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JQX13_14010 PF00072 Response regulator receiver domain JQX13_14010 PF04397 LytTr DNA-binding domain JQX13_14015 PF07694 5TMR of 5TMR-LYT JQX13_14015 PF06580 Histidine kinase JQX13_14015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_14035 PF02463 RecF/RecN/SMC N terminal domain JQX13_14045 PF05175 Methyltransferase small domain JQX13_14065 PF06224 Winged helix DNA-binding domain JQX13_14090 PF13665 Domain of unknown function (DUF4150) JQX13_14090 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_14105 PF03466 LysR substrate binding domain JQX13_14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_14110 PF07690 Major Facilitator Superfamily JQX13_14145 PF00149 Calcineurin-like phosphoesterase JQX13_14155 PF09587 Bacterial capsule synthesis protein PGA_cap JQX13_14165 PF07690 Major Facilitator Superfamily JQX13_14245 PF08448 PAS fold JQX13_14245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_14245 PF08447 PAS fold JQX13_14250 PF01209 ubiE/COQ5 methyltransferase family JQX13_14255 PF00512 His Kinase A (phospho-acceptor) domain JQX13_14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_14255 PF07689 KaiB domain JQX13_14285 PF00308 Bacterial dnaA protein JQX13_14285 PF08299 Bacterial dnaA protein helix-turn-helix JQX13_14285 PF11638 DnaA N-terminal domain JQX13_14290 PF00468 Ribosomal protein L34 JQX13_14300 PF01809 Putative membrane protein insertion efficiency factor JQX13_14305 PF02096 60Kd inner membrane protein JQX13_14305 PF14849 YidC periplasmic domain JQX13_14325 PF10396 GTP-binding protein TrmE N-terminus JQX13_14325 PF01926 50S ribosome-binding GTPase JQX13_14325 PF12631 MnmE helical domain JQX13_14350 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JQX13_14350 PF00437 Type II/IV secretion system protein JQX13_14385 PF01209 ubiE/COQ5 methyltransferase family JQX13_14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_14395 PF03466 LysR substrate binding domain JQX13_14415 PF07731 Multicopper oxidase JQX13_14415 PF07732 Multicopper oxidase JQX13_14455 PF00069 Protein kinase domain JQX13_14465 PF00069 Protein kinase domain JQX13_14480 PF00311 Phosphoenolpyruvate carboxylase JQX13_14510 PF01343 Peptidase family S49 JQX13_14515 PF00561 alpha/beta hydrolase fold JQX13_14515 PF08386 TAP-like protein JQX13_14555 PF14765 Polyketide synthase dehydratase JQX13_14555 PF00550 Phosphopantetheine attachment site JQX13_14555 PF08659 KR domain JQX13_14555 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_14555 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_14555 PF00698 Acyl transferase domain JQX13_14555 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_14560 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_14560 PF14765 Polyketide synthase dehydratase JQX13_14560 PF00550 Phosphopantetheine attachment site JQX13_14560 PF00698 Acyl transferase domain JQX13_14560 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_14560 PF08659 KR domain JQX13_14560 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_14565 PF00550 Phosphopantetheine attachment site JQX13_14565 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_14565 PF00698 Acyl transferase domain JQX13_14565 PF08659 KR domain JQX13_14565 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_14565 PF14765 Polyketide synthase dehydratase JQX13_14565 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_14570 PF14765 Polyketide synthase dehydratase JQX13_14570 PF00698 Acyl transferase domain JQX13_14570 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_14570 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_14570 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_14570 PF08659 KR domain JQX13_14570 PF00550 Phosphopantetheine attachment site JQX13_14575 PF08264 Anticodon-binding domain of tRNA JQX13_14575 PF01588 Putative tRNA binding domain JQX13_14575 PF09334 tRNA synthetases class I (M) JQX13_14595 PF00675 Insulinase (Peptidase family M16) JQX13_14595 PF05193 Peptidase M16 inactive domain JQX13_14605 PF12796 Ankyrin repeats (3 copies) JQX13_14610 PF01695 IstB-like ATP binding protein JQX13_14675 PF13407 Periplasmic binding protein domain JQX13_14680 PF00072 Response regulator receiver domain JQX13_14680 PF01627 Hpt domain JQX13_14680 PF00512 His Kinase A (phospho-acceptor) domain JQX13_14680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_14680 PF17149 Periplasmic sensor domain found in signal transduction proteins JQX13_14680 PF00672 HAMP domain JQX13_14685 PF01134 Glucose inhibited division protein A JQX13_14685 PF13932 GidA associated domain JQX13_14690 PF02527 rRNA small subunit methyltransferase G JQX13_14715 PF13614 AAA domain JQX13_14720 PF02195 ParB-like nuclease domain JQX13_14720 PF17762 HTH domain found in ParB protein JQX13_14735 PF10017 Histidine-specific methyltransferase, SAM-dependent JQX13_14740 PF03781 Sulfatase-modifying factor enzyme 1 JQX13_14740 PF12867 DinB superfamily JQX13_14780 PF00571 CBS domain JQX13_14780 PF02163 Peptidase family M50 JQX13_14785 PF00571 CBS domain JQX13_14815 PF02311 AraC-like ligand binding domain JQX13_14815 PF12833 Helix-turn-helix domain JQX13_14855 PF00067 Cytochrome P450 JQX13_14865 PF00486 Transcriptional regulatory protein, C terminal JQX13_14865 PF00072 Response regulator receiver domain JQX13_14870 PF06745 KaiC JQX13_14875 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system JQX13_14910 PF01261 Xylose isomerase-like TIM barrel JQX13_14915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JQX13_14915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JQX13_14920 PF00480 ROK family JQX13_14925 PF13407 Periplasmic binding protein domain JQX13_14930 PF02653 Branched-chain amino acid transport system / permease component JQX13_14935 PF00005 ABC transporter JQX13_14995 PF00691 OmpA family JQX13_14995 PF05736 OprF membrane domain JQX13_15010 PF00069 Protein kinase domain JQX13_15010 PF03793 PASTA domain JQX13_15015 PF00561 alpha/beta hydrolase fold JQX13_15025 PF13247 4Fe-4S dicluster domain JQX13_15025 PF00037 4Fe-4S binding domain JQX13_15055 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JQX13_15055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JQX13_15060 PF00115 Cytochrome C and Quinol oxidase polypeptide I JQX13_15060 PF00510 Cytochrome c oxidase subunit III JQX13_15065 PF00510 Cytochrome c oxidase subunit III JQX13_15120 PF01266 FAD dependent oxidoreductase JQX13_15130 PF05690 Thiazole biosynthesis protein ThiG JQX13_15135 PF02581 Thiamine monophosphate synthase JQX13_15140 PF00581 Rhodanese-like domain JQX13_15140 PF00899 ThiF family JQX13_15245 PF01145 SPFH domain / Band 7 family JQX13_15245 PF15975 Flotillin JQX13_15265 PF01810 LysE type translocator JQX13_15330 PF03150 Di-haem cytochrome c peroxidase JQX13_15330 PF00034 Cytochrome c JQX13_15340 PF03793 PASTA domain JQX13_15340 PF00069 Protein kinase domain JQX13_15400 PF03466 LysR substrate binding domain JQX13_15400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_15410 PF01965 DJ-1/PfpI family JQX13_15410 PF12833 Helix-turn-helix domain JQX13_15415 PF00106 short chain dehydrogenase JQX13_15455 PF16861 Carbamoyltransferase C-terminus JQX13_15455 PF02543 Carbamoyltransferase N-terminus JQX13_15470 PF14028 Lantibiotic biosynthesis dehydratase C-term JQX13_15470 PF04738 Lantibiotic dehydratase, N terminus JQX13_15475 PF07859 alpha/beta hydrolase fold JQX13_15490 PF02333 Phytase JQX13_15505 PF00722 Glycosyl hydrolases family 16 JQX13_15525 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_15525 PF13191 AAA ATPase domain JQX13_15535 PF01804 Penicillin amidase JQX13_15540 PF00873 AcrB/AcrD/AcrF family JQX13_15545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JQX13_15545 PF00529 HlyD membrane-fusion protein of T1SS JQX13_15550 PF07690 Major Facilitator Superfamily JQX13_15565 PF04616 Glycosyl hydrolases family 43 JQX13_15565 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JQX13_15570 PF04616 Glycosyl hydrolases family 43 JQX13_15570 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JQX13_15580 PF00356 Bacterial regulatory proteins, lacI family JQX13_15585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JQX13_15590 PF02610 L-arabinose isomerase JQX13_15590 PF11762 L-arabinose isomerase C-terminal domain JQX13_15595 PF13407 Periplasmic binding protein domain JQX13_15600 PF00005 ABC transporter JQX13_15605 PF02653 Branched-chain amino acid transport system / permease component JQX13_15610 PF02653 Branched-chain amino acid transport system / permease component JQX13_15615 PF00596 Class II Aldolase and Adducin N-terminal domain JQX13_15620 PF07944 Beta-L-arabinofuranosidase, GH127 JQX13_15635 PF04754 Putative transposase, YhgA-like JQX13_15645 PF00248 Aldo/keto reductase family JQX13_15650 PF03466 LysR substrate binding domain JQX13_15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_15655 PF00561 alpha/beta hydrolase fold JQX13_15660 PF00067 Cytochrome P450 JQX13_15690 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_15690 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_15690 PF01610 Transposase JQX13_15710 PF13426 PAS domain JQX13_15710 PF00072 Response regulator receiver domain JQX13_15710 PF08448 PAS fold JQX13_15710 PF00512 His Kinase A (phospho-acceptor) domain JQX13_15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_15720 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_15720 PF01915 Glycosyl hydrolase family 3 C-terminal domain JQX13_15720 PF14310 Fibronectin type III-like domain JQX13_15760 PF04235 Protein of unknown function (DUF418) JQX13_15770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_15770 PF03466 LysR substrate binding domain JQX13_15775 PF00067 Cytochrome P450 JQX13_15780 PF01047 MarR family JQX13_15785 PF01374 Glycosyl hydrolase family 46 JQX13_15805 PF00892 EamA-like transporter family JQX13_15815 PF01070 FMN-dependent dehydrogenase JQX13_15830 PF03734 L,D-transpeptidase catalytic domain JQX13_15835 PF00248 Aldo/keto reductase family JQX13_15840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_15840 PF00672 HAMP domain JQX13_15840 PF02743 Cache domain JQX13_15870 PF04717 Type VI secretion system, phage-baseplate injector JQX13_15885 PF04717 Type VI secretion system, phage-baseplate injector JQX13_15890 PF06725 3D domain JQX13_15890 PF01476 LysM domain JQX13_15915 PF07859 alpha/beta hydrolase fold JQX13_15920 PF00459 Inositol monophosphatase family JQX13_15930 PF17863 AAA lid domain JQX13_15930 PF07726 ATPase family associated with various cellular activities (AAA) JQX13_15950 PF08448 PAS fold JQX13_15950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_15950 PF00512 His Kinase A (phospho-acceptor) domain JQX13_15950 PF13188 PAS domain JQX13_15950 PF00072 Response regulator receiver domain JQX13_15955 PF00378 Enoyl-CoA hydratase/isomerase JQX13_15960 PF01042 Endoribonuclease L-PSP JQX13_15965 PF01063 Amino-transferase class IV JQX13_15970 PF00155 Aminotransferase class I and II JQX13_15970 PF00392 Bacterial regulatory proteins, gntR family JQX13_16000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQX13_16000 PF00205 Thiamine pyrophosphate enzyme, central domain JQX13_16000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQX13_16005 PF13823 Alcohol dehydrogenase GroES-associated JQX13_16005 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_16005 PF00107 Zinc-binding dehydrogenase JQX13_16020 PF00512 His Kinase A (phospho-acceptor) domain JQX13_16020 PF01627 Hpt domain JQX13_16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_16020 PF00672 HAMP domain JQX13_16020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_16020 PF00072 Response regulator receiver domain JQX13_16025 PF00266 Aminotransferase class-V JQX13_16030 PF00483 Nucleotidyl transferase JQX13_16040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JQX13_16040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JQX13_16040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JQX13_16040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JQX13_16045 PF00583 Acetyltransferase (GNAT) family JQX13_16055 PF00067 Cytochrome P450 JQX13_16070 PF07690 Major Facilitator Superfamily JQX13_16080 PF03453 MoeA N-terminal region (domain I and II) JQX13_16080 PF03454 MoeA C-terminal region (domain IV) JQX13_16080 PF00994 Probable molybdopterin binding domain JQX13_16085 PF12804 MobA-like NTP transferase domain JQX13_16105 PF00561 alpha/beta hydrolase fold JQX13_16110 PF02557 D-alanyl-D-alanine carboxypeptidase JQX13_16140 PF00069 Protein kinase domain JQX13_16140 PF07238 PilZ domain JQX13_16165 PF02913 FAD linked oxidases, C-terminal domain JQX13_16165 PF01565 FAD binding domain JQX13_16175 PF13247 4Fe-4S dicluster domain JQX13_16175 PF12800 4Fe-4S binding domain JQX13_16220 PF00106 short chain dehydrogenase JQX13_16240 PF00756 Putative esterase JQX13_16245 PF00107 Zinc-binding dehydrogenase JQX13_16245 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_16250 PF03466 LysR substrate binding domain JQX13_16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_16255 PF00106 short chain dehydrogenase JQX13_16285 PF13533 Biotin-lipoyl like JQX13_16290 PF00873 AcrB/AcrD/AcrF family JQX13_16295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQX13_16295 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_16305 PF03551 Transcriptional regulator PadR-like family JQX13_16315 PF01619 Proline dehydrogenase JQX13_16320 PF00561 alpha/beta hydrolase fold JQX13_16340 PF03301 Tryptophan 2,3-dioxygenase JQX13_16365 PF00512 His Kinase A (phospho-acceptor) domain JQX13_16365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_16370 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_16370 PF00072 Response regulator receiver domain JQX13_16425 PF08281 Sigma-70, region 4 JQX13_16425 PF04542 Sigma-70 region 2 JQX13_16455 PF03466 LysR substrate binding domain JQX13_16455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_16485 PF03793 PASTA domain JQX13_16485 PF00069 Protein kinase domain JQX13_16505 PF09308 LuxQ, periplasmic JQX13_16505 PF00512 His Kinase A (phospho-acceptor) domain JQX13_16505 PF00072 Response regulator receiver domain JQX13_16505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_16535 PF00478 IMP dehydrogenase / GMP reductase domain JQX13_16535 PF00571 CBS domain JQX13_16540 PF17886 HSP20-like domain found in ArsA JQX13_16540 PF02374 Anion-transporting ATPase JQX13_16545 PF02374 Anion-transporting ATPase JQX13_16570 PF00596 Class II Aldolase and Adducin N-terminal domain JQX13_16575 PF01008 Initiation factor 2 subunit family JQX13_16580 PF01048 Phosphorylase superfamily JQX13_16595 PF08271 TFIIB zinc-binding JQX13_16615 PF00155 Aminotransferase class I and II JQX13_16675 PF07690 Major Facilitator Superfamily JQX13_16680 PF00043 Glutathione S-transferase, C-terminal domain JQX13_16680 PF13417 Glutathione S-transferase, N-terminal domain JQX13_16705 PF03746 LamB/YcsF family JQX13_16710 PF02626 Carboxyltransferase domain, subdomain A and B JQX13_16730 PF00512 His Kinase A (phospho-acceptor) domain JQX13_16730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_16735 PF07681 DoxX JQX13_16740 PF08281 Sigma-70, region 4 JQX13_16740 PF12680 SnoaL-like domain JQX13_16740 PF04542 Sigma-70 region 2 JQX13_16745 PF00456 Transketolase, thiamine diphosphate binding domain JQX13_16745 PF02780 Transketolase, C-terminal domain JQX13_16745 PF02779 Transketolase, pyrimidine binding domain JQX13_16760 PF00989 PAS fold JQX13_16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_16760 PF00512 His Kinase A (phospho-acceptor) domain JQX13_16785 PF00072 Response regulator receiver domain JQX13_16785 PF02954 Bacterial regulatory protein, Fis family JQX13_16785 PF00158 Sigma-54 interaction domain JQX13_16805 PF00264 Common central domain of tyrosinase JQX13_16815 PF01327 Polypeptide deformylase JQX13_16830 PF00158 Sigma-54 interaction domain JQX13_16830 PF02954 Bacterial regulatory protein, Fis family JQX13_16830 PF01590 GAF domain JQX13_16835 PF03951 Glutamine synthetase, beta-Grasp domain JQX13_16835 PF00120 Glutamine synthetase, catalytic domain JQX13_16840 PF07995 Glucose / Sorbosone dehydrogenase JQX13_16930 PF00106 short chain dehydrogenase JQX13_16935 PF07859 alpha/beta hydrolase fold JQX13_16940 PF00743 Flavin-binding monooxygenase-like JQX13_16990 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JQX13_17015 PF04134 Protein of unknown function, DUF393 JQX13_17020 PF00583 Acetyltransferase (GNAT) family JQX13_17025 PF00171 Aldehyde dehydrogenase family JQX13_17030 PF00041 Fibronectin type III domain JQX13_17030 PF01341 Glycosyl hydrolases family 6 JQX13_17030 PF00553 Cellulose binding domain JQX13_17080 PF04229 GrpB protein JQX13_17115 PF02463 RecF/RecN/SMC N terminal domain JQX13_17125 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_17125 PF01434 Peptidase family M41 JQX13_17125 PF17862 AAA+ lid domain JQX13_17140 PF03466 LysR substrate binding domain JQX13_17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_17160 PF02405 Permease MlaE JQX13_17165 PF00005 ABC transporter JQX13_17190 PF00723 Glycosyl hydrolases family 15 JQX13_17200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JQX13_17200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JQX13_17215 PF11838 ERAP1-like C-terminal domain JQX13_17215 PF01433 Peptidase family M1 domain JQX13_17230 PF00583 Acetyltransferase (GNAT) family JQX13_17235 PF00266 Aminotransferase class-V JQX13_17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17245 PF00989 PAS fold JQX13_17245 PF00512 His Kinase A (phospho-acceptor) domain JQX13_17250 PF00072 Response regulator receiver domain JQX13_17255 PF00512 His Kinase A (phospho-acceptor) domain JQX13_17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17255 PF00072 Response regulator receiver domain JQX13_17255 PF00989 PAS fold JQX13_17255 PF01627 Hpt domain JQX13_17255 PF18415 Histidine kinase receptor ArcB trans-membrane domain JQX13_17260 PF00072 Response regulator receiver domain JQX13_17260 PF00486 Transcriptional regulatory protein, C terminal JQX13_17275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17275 PF00204 DNA gyrase B JQX13_17275 PF00986 DNA gyrase B subunit, carboxyl terminus JQX13_17275 PF01751 Toprim domain JQX13_17280 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_17280 PF00107 Zinc-binding dehydrogenase JQX13_17285 PF00069 Protein kinase domain JQX13_17295 PF00149 Calcineurin-like phosphoesterase JQX13_17320 PF02472 Biopolymer transport protein ExbD/TolR JQX13_17325 PF02472 Biopolymer transport protein ExbD/TolR JQX13_17330 PF01618 MotA/TolQ/ExbB proton channel family JQX13_17340 PF07714 Protein tyrosine kinase JQX13_17345 PF01509 TruB family pseudouridylate synthase (N terminal domain) JQX13_17345 PF16198 tRNA pseudouridylate synthase B C-terminal domain JQX13_17350 PF17149 Periplasmic sensor domain found in signal transduction proteins JQX13_17350 PF00672 HAMP domain JQX13_17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17350 PF00512 His Kinase A (phospho-acceptor) domain JQX13_17350 PF00072 Response regulator receiver domain JQX13_17350 PF01627 Hpt domain JQX13_17370 PF13183 4Fe-4S dicluster domain JQX13_17370 PF02754 Cysteine-rich domain JQX13_17390 PF02683 Cytochrome C biogenesis protein transmembrane region JQX13_17390 PF11412 Disulphide bond corrector protein DsbC JQX13_17395 PF00578 AhpC/TSA family JQX13_17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17440 PF00171 Aldehyde dehydrogenase family JQX13_17445 PF00072 Response regulator receiver domain JQX13_17445 PF00158 Sigma-54 interaction domain JQX13_17445 PF02954 Bacterial regulatory protein, Fis family JQX13_17450 PF00072 Response regulator receiver domain JQX13_17450 PF13188 PAS domain JQX13_17450 PF08448 PAS fold JQX13_17450 PF00512 His Kinase A (phospho-acceptor) domain JQX13_17450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17455 PF00072 Response regulator receiver domain JQX13_17460 PF00360 Phytochrome region JQX13_17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17460 PF00512 His Kinase A (phospho-acceptor) domain JQX13_17460 PF01590 GAF domain JQX13_17460 PF08446 PAS fold JQX13_17465 PF12419 SNF2 Helicase protein JQX13_17465 PF00271 Helicase conserved C-terminal domain JQX13_17465 PF00176 SNF2 family N-terminal domain JQX13_17480 PF01323 DSBA-like thioredoxin domain JQX13_17490 PF00593 TonB dependent receptor JQX13_17505 PF00684 DnaJ central domain JQX13_17505 PF01556 DnaJ C terminal domain JQX13_17505 PF00226 DnaJ domain JQX13_17510 PF00012 Hsp70 protein JQX13_17515 PF00069 Protein kinase domain JQX13_17530 PF00027 Cyclic nucleotide-binding domain JQX13_17530 PF13545 Crp-like helix-turn-helix domain JQX13_17535 PF13188 PAS domain JQX13_17535 PF08448 PAS fold JQX13_17535 PF00072 Response regulator receiver domain JQX13_17535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17535 PF00512 His Kinase A (phospho-acceptor) domain JQX13_17545 PF02558 Ketopantoate reductase PanE/ApbA JQX13_17545 PF08546 Ketopantoate reductase PanE/ApbA C terminal JQX13_17550 PF04055 Radical SAM superfamily JQX13_17595 PF07930 D-aminopeptidase, domain B JQX13_17595 PF00144 Beta-lactamase JQX13_17625 PF03793 PASTA domain JQX13_17625 PF00069 Protein kinase domain JQX13_17635 PF00202 Aminotransferase class-III JQX13_17650 PF04226 Transglycosylase associated protein JQX13_17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_17665 PF08448 PAS fold JQX13_17665 PF00512 His Kinase A (phospho-acceptor) domain JQX13_17665 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JQX13_17665 PF00672 HAMP domain JQX13_17670 PF13302 Acetyltransferase (GNAT) domain JQX13_17675 PF00476 DNA polymerase family A JQX13_17675 PF01367 5'-3' exonuclease, C-terminal SAM fold JQX13_17675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JQX13_17695 PF03880 DbpA RNA binding domain JQX13_17695 PF00271 Helicase conserved C-terminal domain JQX13_17695 PF00270 DEAD/DEAH box helicase JQX13_17705 PF00654 Voltage gated chloride channel JQX13_17730 PF00440 Bacterial regulatory proteins, tetR family JQX13_17735 PF01568 Molydopterin dinucleotide binding domain JQX13_17735 PF00384 Molybdopterin oxidoreductase JQX13_17735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JQX13_17795 PF00106 short chain dehydrogenase JQX13_17800 PF00440 Bacterial regulatory proteins, tetR family JQX13_17800 PF08361 MAATS-type transcriptional repressor, C-terminal region JQX13_17880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_17930 PF02371 Transposase IS116/IS110/IS902 family JQX13_17930 PF01548 Transposase JQX13_17965 PF01548 Transposase JQX13_17965 PF02371 Transposase IS116/IS110/IS902 family JQX13_17995 PF02371 Transposase IS116/IS110/IS902 family JQX13_17995 PF01548 Transposase JQX13_18010 PF02223 Thymidylate kinase JQX13_18055 PF00356 Bacterial regulatory proteins, lacI family JQX13_18055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JQX13_18060 PF00391 PEP-utilising enzyme, mobile domain JQX13_18060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JQX13_18060 PF00381 PTS HPr component phosphorylation site JQX13_18060 PF05524 PEP-utilising enzyme, N-terminal JQX13_18060 PF02896 PEP-utilising enzyme, TIM barrel domain JQX13_18065 PF00294 pfkB family carbohydrate kinase JQX13_18070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JQX13_18070 PF02378 Phosphotransferase system, EIIC JQX13_18075 PF01627 Hpt domain JQX13_18075 PF00672 HAMP domain JQX13_18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_18075 PF00512 His Kinase A (phospho-acceptor) domain JQX13_18075 PF00072 Response regulator receiver domain JQX13_18075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_18080 PF02705 K+ potassium transporter JQX13_18105 PF07676 WD40-like Beta Propeller Repeat JQX13_18120 PF01434 Peptidase family M41 JQX13_18120 PF06480 FtsH Extracellular JQX13_18120 PF17862 AAA+ lid domain JQX13_18120 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_18155 PF18030 RimK PreATP-grasp domain JQX13_18155 PF08443 RimK-like ATP-grasp domain JQX13_18160 PF00158 Sigma-54 interaction domain JQX13_18160 PF00072 Response regulator receiver domain JQX13_18160 PF02954 Bacterial regulatory protein, Fis family JQX13_18185 PF00133 tRNA synthetases class I (I, L, M and V) JQX13_18185 PF06827 Zinc finger found in FPG and IleRS JQX13_18185 PF08264 Anticodon-binding domain of tRNA JQX13_18205 PF00133 tRNA synthetases class I (I, L, M and V) JQX13_18205 PF06827 Zinc finger found in FPG and IleRS JQX13_18205 PF08264 Anticodon-binding domain of tRNA JQX13_18240 PF01252 Signal peptidase (SPase) II JQX13_18245 PF01252 Signal peptidase (SPase) II JQX13_18250 PF01790 Prolipoprotein diacylglyceryl transferase JQX13_18285 PF00202 Aminotransferase class-III JQX13_18290 PF00069 Protein kinase domain JQX13_18295 PF01740 STAS domain JQX13_18295 PF08678 Rsbr N terminal JQX13_18300 PF01740 STAS domain JQX13_18305 PF13581 Histidine kinase-like ATPase domain JQX13_18315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_18315 PF00512 His Kinase A (phospho-acceptor) domain JQX13_18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_18320 PF00512 His Kinase A (phospho-acceptor) domain JQX13_18320 PF09308 LuxQ, periplasmic JQX13_18320 PF00072 Response regulator receiver domain JQX13_18330 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_18330 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_18330 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_18330 PF03413 Peptidase propeptide and YPEB domain JQX13_18330 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_18340 PF05683 Fumarase C-terminus JQX13_18340 PF05681 Fumarate hydratase (Fumerase) JQX13_18380 PF12826 Helix-hairpin-helix motif JQX13_18380 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JQX13_18380 PF03120 NAD-dependent DNA ligase OB-fold domain JQX13_18380 PF01653 NAD-dependent DNA ligase adenylation domain JQX13_18380 PF00533 BRCA1 C Terminus (BRCT) domain JQX13_18385 PF03577 Peptidase family C69 JQX13_18395 PF01568 Molydopterin dinucleotide binding domain JQX13_18395 PF00384 Molybdopterin oxidoreductase JQX13_18400 PF04493 Endonuclease V JQX13_18405 PF12146 Serine aminopeptidase, S33 JQX13_18440 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JQX13_18440 PF00749 tRNA synthetases class I (E and Q), catalytic domain JQX13_18450 PF08447 PAS fold JQX13_18450 PF13426 PAS domain JQX13_18450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_18465 PF00391 PEP-utilising enzyme, mobile domain JQX13_18465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JQX13_18470 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JQX13_18470 PF00391 PEP-utilising enzyme, mobile domain JQX13_18480 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_18495 PF00561 alpha/beta hydrolase fold JQX13_18535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_18535 PF00512 His Kinase A (phospho-acceptor) domain JQX13_18535 PF00989 PAS fold JQX13_18540 PF01161 Phosphatidylethanolamine-binding protein JQX13_18545 PF00583 Acetyltransferase (GNAT) family JQX13_18580 PF00119 ATP synthase A chain JQX13_18585 PF00137 ATP synthase subunit C JQX13_18590 PF00430 ATP synthase B/B' CF(0) JQX13_18595 PF01926 50S ribosome-binding GTPase JQX13_18595 PF06071 Protein of unknown function (DUF933) JQX13_18605 PF00285 Citrate synthase, C-terminal domain JQX13_18625 PF00355 Rieske [2Fe-2S] domain JQX13_18640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JQX13_18640 PF03129 Anticodon binding domain JQX13_18660 PF07690 Major Facilitator Superfamily JQX13_18665 PF00067 Cytochrome P450 JQX13_18675 PF00067 Cytochrome P450 JQX13_18680 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_18685 PF14759 Reductase C-terminal JQX13_18685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_18700 PF00743 Flavin-binding monooxygenase-like JQX13_18720 PF01699 Sodium/calcium exchanger protein JQX13_18730 PF00149 Calcineurin-like phosphoesterase JQX13_18765 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_18765 PF13191 AAA ATPase domain JQX13_18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_18770 PF00512 His Kinase A (phospho-acceptor) domain JQX13_18770 PF09308 LuxQ, periplasmic JQX13_18770 PF00072 Response regulator receiver domain JQX13_18780 PF00171 Aldehyde dehydrogenase family JQX13_18805 PF00148 Nitrogenase component 1 type Oxidoreductase JQX13_18810 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JQX13_18810 PF01409 tRNA synthetases class II core domain (F) JQX13_18820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JQX13_18820 PF00034 Cytochrome c JQX13_18820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JQX13_18835 PF00067 Cytochrome P450 JQX13_18855 PF00082 Subtilase family JQX13_18900 PF00672 HAMP domain JQX13_18900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_18900 PF00512 His Kinase A (phospho-acceptor) domain JQX13_18900 PF00072 Response regulator receiver domain JQX13_18900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_18900 PF01627 Hpt domain JQX13_18905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_18905 PF00072 Response regulator receiver domain JQX13_18905 PF01627 Hpt domain JQX13_18905 PF00512 His Kinase A (phospho-acceptor) domain JQX13_18905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_18905 PF00672 HAMP domain JQX13_18925 PF00989 PAS fold JQX13_18925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_18925 PF00512 His Kinase A (phospho-acceptor) domain JQX13_18930 PF01557 Fumarylacetoacetate (FAA) hydrolase family JQX13_18935 PF17200 Single Cache domain 2 JQX13_18935 PF00672 HAMP domain JQX13_18935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_18945 PF00171 Aldehyde dehydrogenase family JQX13_18950 PF01042 Endoribonuclease L-PSP JQX13_18955 PF06052 3-hydroxyanthranilic acid dioxygenase JQX13_18965 PF00266 Aminotransferase class-V JQX13_18970 PF01494 FAD binding domain JQX13_18995 PF00342 Phosphoglucose isomerase JQX13_19005 PF14791 DNA polymerase beta thumb JQX13_19005 PF14716 Helix-hairpin-helix domain JQX13_19005 PF02811 PHP domain JQX13_19010 PF00072 Response regulator receiver domain JQX13_19010 PF01966 HD domain JQX13_19015 PF00072 Response regulator receiver domain JQX13_19025 PF12697 Alpha/beta hydrolase family JQX13_19045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQX13_19060 PF00255 Glutathione peroxidase JQX13_19075 PF09587 Bacterial capsule synthesis protein PGA_cap JQX13_19090 PF00266 Aminotransferase class-V JQX13_19110 PF00723 Glycosyl hydrolases family 15 JQX13_19115 PF00005 ABC transporter JQX13_19120 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_19145 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_19150 PF03423 Carbohydrate binding domain (family 25) JQX13_19150 PF00041 Fibronectin type III domain JQX13_19150 PF03065 Glycosyl hydrolase family 57 JQX13_19155 PF00440 Bacterial regulatory proteins, tetR family JQX13_19155 PF08361 MAATS-type transcriptional repressor, C-terminal region JQX13_19160 PF01494 FAD binding domain JQX13_19295 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JQX13_19300 PF09312 SurA N-terminal domain JQX13_19300 PF00639 PPIC-type PPIASE domain JQX13_19305 PF05698 Bacterial trigger factor protein (TF) C-terminus JQX13_19325 PF01541 GIY-YIG catalytic domain JQX13_19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_19330 PF00512 His Kinase A (phospho-acceptor) domain JQX13_19345 PF04055 Radical SAM superfamily JQX13_19350 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JQX13_19350 PF09297 NADH pyrophosphatase zinc ribbon domain JQX13_19350 PF00293 NUDIX domain JQX13_19360 PF00664 ABC transporter transmembrane region JQX13_19360 PF00005 ABC transporter JQX13_19365 PF00005 ABC transporter JQX13_19365 PF00664 ABC transporter transmembrane region JQX13_19370 PF04235 Protein of unknown function (DUF418) JQX13_19385 PF00069 Protein kinase domain JQX13_19390 PF00593 TonB dependent receptor JQX13_19390 PF07715 TonB-dependent Receptor Plug Domain JQX13_19405 PF00072 Response regulator receiver domain JQX13_19405 PF00486 Transcriptional regulatory protein, C terminal JQX13_19410 PF00069 Protein kinase domain JQX13_19410 PF03793 PASTA domain JQX13_19430 PF13193 AMP-binding enzyme C-terminal domain JQX13_19430 PF00501 AMP-binding enzyme JQX13_19435 PF08546 Ketopantoate reductase PanE/ApbA C terminal JQX13_19435 PF02558 Ketopantoate reductase PanE/ApbA JQX13_19440 PF00989 PAS fold JQX13_19440 PF11808 Phosphate regulon sensor protein PhoR JQX13_19440 PF00512 His Kinase A (phospho-acceptor) domain JQX13_19440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_19445 PF00486 Transcriptional regulatory protein, C terminal JQX13_19445 PF00072 Response regulator receiver domain JQX13_19450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JQX13_19455 PF00873 AcrB/AcrD/AcrF family JQX13_19460 PF00512 His Kinase A (phospho-acceptor) domain JQX13_19460 PF00989 PAS fold JQX13_19460 PF16736 Single Cache-like JQX13_19460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_19495 PF01590 GAF domain JQX13_19495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_19495 PF00512 His Kinase A (phospho-acceptor) domain JQX13_19495 PF08446 PAS fold JQX13_19495 PF00360 Phytochrome region JQX13_19520 PF00155 Aminotransferase class I and II JQX13_19530 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JQX13_19540 PF01751 Toprim domain JQX13_19540 PF01131 DNA topoisomerase JQX13_19550 PF13091 PLD-like domain JQX13_19550 PF13396 Phospholipase_D-nuclease N-terminal JQX13_19595 PF00155 Aminotransferase class I and II JQX13_19610 PF06689 ClpX C4-type zinc finger JQX13_19610 PF07724 AAA domain (Cdc48 subfamily) JQX13_19610 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_19615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JQX13_19615 PF11941 Domain of unknown function (DUF3459) JQX13_19615 PF00128 Alpha amylase, catalytic domain JQX13_19625 PF00860 Permease family JQX13_19630 PF01370 NAD dependent epimerase/dehydratase family JQX13_19630 PF08338 Domain of unknown function (DUF1731) JQX13_19645 PF00144 Beta-lactamase JQX13_19645 PF11954 Domain of unknown function (DUF3471) JQX13_19650 PF00069 Protein kinase domain JQX13_19655 PF01061 ABC-2 type transporter JQX13_19660 PF00005 ABC transporter JQX13_19665 PF12848 ABC transporter JQX13_19665 PF00005 ABC transporter JQX13_19670 PF02463 RecF/RecN/SMC N terminal domain JQX13_19690 PF03466 LysR substrate binding domain JQX13_19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_19700 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JQX13_19700 PF18416 N-acetylglucosamine binding protein domain 2 JQX13_19705 PF01979 Amidohydrolase family JQX13_19725 PF01425 Amidase JQX13_19735 PF00144 Beta-lactamase JQX13_19740 PF00561 alpha/beta hydrolase fold JQX13_19750 PF00881 Nitroreductase family JQX13_19770 PF00067 Cytochrome P450 JQX13_19810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQX13_19810 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JQX13_19810 PF02142 MGS-like domain JQX13_19835 PF00565 Staphylococcal nuclease homologue JQX13_19845 PF00924 Mechanosensitive ion channel JQX13_19860 PF00005 ABC transporter JQX13_19865 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_19885 PF02146 Sir2 family JQX13_19890 PF01040 UbiA prenyltransferase family JQX13_19890 PF02628 Cytochrome oxidase assembly protein JQX13_19895 PF02954 Bacterial regulatory protein, Fis family JQX13_19895 PF00158 Sigma-54 interaction domain JQX13_19895 PF00072 Response regulator receiver domain JQX13_19905 PF00171 Aldehyde dehydrogenase family JQX13_19925 PF01569 PAP2 superfamily JQX13_19955 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_19955 PF00107 Zinc-binding dehydrogenase JQX13_19960 PF03466 LysR substrate binding domain JQX13_19960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_19980 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_19985 PF00512 His Kinase A (phospho-acceptor) domain JQX13_19985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_19985 PF00989 PAS fold JQX13_19990 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal JQX13_19990 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal JQX13_20000 PF07238 PilZ domain JQX13_20000 PF00069 Protein kinase domain JQX13_20020 PF00171 Aldehyde dehydrogenase family JQX13_20030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20030 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20055 PF13614 AAA domain JQX13_20120 PF00005 ABC transporter JQX13_20135 PF00440 Bacterial regulatory proteins, tetR family JQX13_20135 PF08361 MAATS-type transcriptional repressor, C-terminal region JQX13_20160 PF00106 short chain dehydrogenase JQX13_20170 PF00195 Chalcone and stilbene synthases, N-terminal domain JQX13_20170 PF02797 Chalcone and stilbene synthases, C-terminal domain JQX13_20190 PF08448 PAS fold JQX13_20190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20190 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20190 PF00072 Response regulator receiver domain JQX13_20190 PF13426 PAS domain JQX13_20195 PF00691 OmpA family JQX13_20220 PF00561 alpha/beta hydrolase fold JQX13_20260 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20260 PF00989 PAS fold JQX13_20260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20260 PF00672 HAMP domain JQX13_20270 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_20270 PF06480 FtsH Extracellular JQX13_20270 PF17862 AAA+ lid domain JQX13_20270 PF01434 Peptidase family M41 JQX13_20280 PF02566 OsmC-like protein JQX13_20295 PF07969 Amidohydrolase family JQX13_20320 PF00561 alpha/beta hydrolase fold JQX13_20330 PF00672 HAMP domain JQX13_20330 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20330 PF01627 Hpt domain JQX13_20330 PF17149 Periplasmic sensor domain found in signal transduction proteins JQX13_20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20330 PF00072 Response regulator receiver domain JQX13_20340 PF12706 Beta-lactamase superfamily domain JQX13_20340 PF00753 Metallo-beta-lactamase superfamily JQX13_20370 PF00440 Bacterial regulatory proteins, tetR family JQX13_20380 PF00873 AcrB/AcrD/AcrF family JQX13_20400 PF00313 'Cold-shock' DNA-binding domain JQX13_20415 PF03030 Inorganic H+ pyrophosphatase JQX13_20425 PF02667 Short chain fatty acid transporter JQX13_20435 PF00069 Protein kinase domain JQX13_20435 PF07238 PilZ domain JQX13_20440 PF03109 ABC1 family JQX13_20445 PF00486 Transcriptional regulatory protein, C terminal JQX13_20445 PF00072 Response regulator receiver domain JQX13_20450 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20450 PF07689 KaiB domain JQX13_20450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20455 PF00069 Protein kinase domain JQX13_20455 PF03793 PASTA domain JQX13_20465 PF00069 Protein kinase domain JQX13_20475 PF00072 Response regulator receiver domain JQX13_20475 PF00196 Bacterial regulatory proteins, luxR family JQX13_20480 PF00486 Transcriptional regulatory protein, C terminal JQX13_20480 PF00072 Response regulator receiver domain JQX13_20485 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20485 PF00672 HAMP domain JQX13_20485 PF00072 Response regulator receiver domain JQX13_20485 PF01627 Hpt domain JQX13_20485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_20500 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20505 PF18339 RapA N-terminal Tudor like domain 1 JQX13_20505 PF00271 Helicase conserved C-terminal domain JQX13_20505 PF18337 RapA N-terminal Tudor like domain JQX13_20505 PF12137 RNA polymerase recycling family C-terminal JQX13_20505 PF00176 SNF2 family N-terminal domain JQX13_20535 PF00005 ABC transporter JQX13_20535 PF00664 ABC transporter transmembrane region JQX13_20545 PF00684 DnaJ central domain JQX13_20545 PF01556 DnaJ C terminal domain JQX13_20545 PF00226 DnaJ domain JQX13_20555 PF00069 Protein kinase domain JQX13_20565 PF04348 LppC putative lipoprotein JQX13_20590 PF00069 Protein kinase domain JQX13_20590 PF07238 PilZ domain JQX13_20605 PF00437 Type II/IV secretion system protein JQX13_20610 PF03167 Uracil DNA glycosylase superfamily JQX13_20635 PF00521 DNA gyrase/topoisomerase IV, subunit A JQX13_20635 PF03989 DNA gyrase C-terminal domain, beta-propeller JQX13_20640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20640 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20645 PF00561 alpha/beta hydrolase fold JQX13_20660 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20665 PF06803 Protein of unknown function (DUF1232) JQX13_20675 PF13454 FAD-NAD(P)-binding JQX13_20680 PF01979 Amidohydrolase family JQX13_20685 PF03561 Allantoicase repeat JQX13_20695 PF00576 HIUase/Transthyretin family JQX13_20715 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_20760 PF00069 Protein kinase domain JQX13_20760 PF07238 PilZ domain JQX13_20780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_20780 PF03466 LysR substrate binding domain JQX13_20795 PF00550 Phosphopantetheine attachment site JQX13_20795 PF08659 KR domain JQX13_20795 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_20795 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_20795 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_20795 PF00698 Acyl transferase domain JQX13_20865 PF12894 Anaphase-promoting complex subunit 4 WD40 domain JQX13_20865 PF00400 WD domain, G-beta repeat JQX13_20875 PF00400 WD domain, G-beta repeat JQX13_20910 PF00082 Subtilase family JQX13_20910 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_20930 PF00989 PAS fold JQX13_20930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_20930 PF00512 His Kinase A (phospho-acceptor) domain JQX13_20945 PF16884 N-terminal domain of oxidoreductase JQX13_20945 PF00107 Zinc-binding dehydrogenase JQX13_20955 PF13411 MerR HTH family regulatory protein JQX13_20970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JQX13_20970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JQX13_20975 PF03099 Biotin/lipoate A/B protein ligase family JQX13_20975 PF10437 Bacterial lipoate protein ligase C-terminus JQX13_20980 PF03413 Peptidase propeptide and YPEB domain JQX13_20980 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_20980 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_20980 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_21000 PF01145 SPFH domain / Band 7 family JQX13_21000 PF16200 C-terminal region of band_7 JQX13_21010 PF00534 Glycosyl transferases group 1 JQX13_21020 PF07969 Amidohydrolase family JQX13_21025 PF03466 LysR substrate binding domain JQX13_21025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_21130 PF18766 SWI2/SNF2 ATPase JQX13_21130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JQX13_21130 PF12008 Type I restriction and modification enzyme - subunit R C terminal JQX13_21145 PF02384 N-6 DNA Methylase JQX13_21145 PF12161 HsdM N-terminal domain JQX13_21160 PF00069 Protein kinase domain JQX13_21160 PF03793 PASTA domain JQX13_21180 PF00069 Protein kinase domain JQX13_21180 PF03793 PASTA domain JQX13_21225 PF01119 DNA mismatch repair protein, C-terminal domain JQX13_21225 PF08676 MutL C terminal dimerisation domain JQX13_21285 PF01230 HIT domain JQX13_21300 PF01494 FAD binding domain JQX13_21315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQX13_21320 PF07759 Protein of unknown function (DUF1615) JQX13_21325 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_21325 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_21325 PF03413 Peptidase propeptide and YPEB domain JQX13_21325 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_21335 PF01435 Peptidase family M48 JQX13_21335 PF07720 Tetratricopeptide repeat JQX13_21350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_21350 PF12806 Acetyl-CoA dehydrogenase C-terminal like JQX13_21350 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_21350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_21370 PF00512 His Kinase A (phospho-acceptor) domain JQX13_21370 PF08446 PAS fold JQX13_21370 PF00360 Phytochrome region JQX13_21370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_21370 PF01590 GAF domain JQX13_21375 PF00072 Response regulator receiver domain JQX13_21380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_21380 PF00672 HAMP domain JQX13_21380 PF00512 His Kinase A (phospho-acceptor) domain JQX13_21410 PF02585 GlcNAc-PI de-N-acetylase JQX13_21460 PF00512 His Kinase A (phospho-acceptor) domain JQX13_21460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_21460 PF00672 HAMP domain JQX13_21460 PF08448 PAS fold JQX13_21460 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JQX13_21465 PF02566 OsmC-like protein JQX13_21470 PF01047 MarR family JQX13_21495 PF00069 Protein kinase domain JQX13_21500 PF00069 Protein kinase domain JQX13_21520 PF00512 His Kinase A (phospho-acceptor) domain JQX13_21520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_21520 PF07689 KaiB domain JQX13_21525 PF00440 Bacterial regulatory proteins, tetR family JQX13_21525 PF08361 MAATS-type transcriptional repressor, C-terminal region JQX13_21530 PF00520 Ion transport protein JQX13_21530 PF00027 Cyclic nucleotide-binding domain JQX13_21565 PF00544 Pectate lyase JQX13_21585 PF01965 DJ-1/PfpI family JQX13_21590 PF01965 DJ-1/PfpI family JQX13_21615 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA JQX13_21630 PF02632 BioY family JQX13_21655 PF01817 Chorismate mutase type II JQX13_21655 PF02153 Prephenate dehydrogenase JQX13_21660 PF16325 Peptidase family U32 C-terminal domain JQX13_21660 PF01136 Peptidase family U32 JQX13_21665 PF02146 Sir2 family JQX13_21670 PF00155 Aminotransferase class I and II JQX13_21675 PF13533 Biotin-lipoyl like JQX13_21680 PF00873 AcrB/AcrD/AcrF family JQX13_21685 PF02321 Outer membrane efflux protein JQX13_21690 PF00072 Response regulator receiver domain JQX13_21690 PF00486 Transcriptional regulatory protein, C terminal JQX13_21695 PF00672 HAMP domain JQX13_21695 PF00512 His Kinase A (phospho-acceptor) domain JQX13_21695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_21700 PF00873 AcrB/AcrD/AcrF family JQX13_21710 PF02321 Outer membrane efflux protein JQX13_21720 PF00067 Cytochrome P450 JQX13_21780 PF01619 Proline dehydrogenase JQX13_21790 PF00155 Aminotransferase class I and II JQX13_21795 PF01037 Lrp/AsnC ligand binding domain JQX13_21800 PF01522 Polysaccharide deacetylase JQX13_21800 PF00963 Cohesin domain JQX13_21815 PF00248 Aldo/keto reductase family JQX13_21820 PF00756 Putative esterase JQX13_21820 PF08310 LGFP repeat JQX13_21830 PF08000 Bacterial PH domain JQX13_21830 PF11724 YvbH-like oligomerisation region JQX13_21835 PF00756 Putative esterase JQX13_21835 PF08310 LGFP repeat JQX13_21840 PF00326 Prolyl oligopeptidase family JQX13_21840 PF07676 WD40-like Beta Propeller Repeat JQX13_21855 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_21865 PF01209 ubiE/COQ5 methyltransferase family JQX13_21880 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JQX13_21890 PF00158 Sigma-54 interaction domain JQX13_21890 PF01590 GAF domain JQX13_21920 PF05139 Erythromycin esterase JQX13_21920 PF00156 Phosphoribosyl transferase domain JQX13_21930 PF07885 Ion channel JQX13_21930 PF00027 Cyclic nucleotide-binding domain JQX13_21945 PF04389 Peptidase family M28 JQX13_21950 PF01327 Polypeptide deformylase JQX13_21970 PF00012 Hsp70 protein JQX13_21980 PF00719 Inorganic pyrophosphatase JQX13_21990 PF00069 Protein kinase domain JQX13_21990 PF03793 PASTA domain JQX13_22025 PF00210 Ferritin-like domain JQX13_22065 PF10459 Peptidase S46 JQX13_22080 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_22095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_22095 PF00672 HAMP domain JQX13_22095 PF02743 Cache domain JQX13_22120 PF00069 Protein kinase domain JQX13_22135 PF01979 Amidohydrolase family JQX13_22145 PF00149 Calcineurin-like phosphoesterase JQX13_22150 PF01370 NAD dependent epimerase/dehydratase family JQX13_22150 PF08338 Domain of unknown function (DUF1731) JQX13_22160 PF00348 Polyprenyl synthetase JQX13_22165 PF01593 Flavin containing amine oxidoreductase JQX13_22175 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JQX13_22180 PF01593 Flavin containing amine oxidoreductase JQX13_22210 PF13411 MerR HTH family regulatory protein JQX13_22210 PF02310 B12 binding domain JQX13_22215 PF02607 B12 binding domain JQX13_22215 PF13411 MerR HTH family regulatory protein JQX13_22215 PF02310 B12 binding domain JQX13_22235 PF00854 POT family JQX13_22240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQX13_22240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQX13_22240 PF00205 Thiamine pyrophosphate enzyme, central domain JQX13_22260 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JQX13_22260 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JQX13_22265 PF09844 Uncharacterized conserved protein (COG2071) JQX13_22280 PF00069 Protein kinase domain JQX13_22285 PF00072 Response regulator receiver domain JQX13_22285 PF13188 PAS domain JQX13_22285 PF08448 PAS fold JQX13_22285 PF00512 His Kinase A (phospho-acceptor) domain JQX13_22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_22290 PF03169 OPT oligopeptide transporter protein JQX13_22295 PF03793 PASTA domain JQX13_22295 PF00069 Protein kinase domain JQX13_22300 PF13416 Bacterial extracellular solute-binding protein JQX13_22305 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_22310 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_22335 PF03466 LysR substrate binding domain JQX13_22340 PF00248 Aldo/keto reductase family JQX13_22360 PF02983 Alpha-lytic protease prodomain JQX13_22370 PF07995 Glucose / Sorbosone dehydrogenase JQX13_22375 PF00067 Cytochrome P450 JQX13_22385 PF00067 Cytochrome P450 JQX13_22410 PF00942 Cellulose binding domain JQX13_22415 PF05139 Erythromycin esterase JQX13_22415 PF00156 Phosphoribosyl transferase domain JQX13_22425 PF00756 Putative esterase JQX13_22430 PF00107 Zinc-binding dehydrogenase JQX13_22430 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_22450 PF00891 O-methyltransferase domain JQX13_22460 PF02803 Thiolase, C-terminal domain JQX13_22460 PF00108 Thiolase, N-terminal domain JQX13_22505 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JQX13_22515 PF00202 Aminotransferase class-III JQX13_22525 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JQX13_22525 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JQX13_22540 PF13193 AMP-binding enzyme C-terminal domain JQX13_22540 PF00501 AMP-binding enzyme JQX13_22545 PF00085 Thioredoxin JQX13_22550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_22550 PF03466 LysR substrate binding domain JQX13_22555 PF00860 Permease family JQX13_22560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JQX13_22560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JQX13_22565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JQX13_22570 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JQX13_22570 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JQX13_22580 PF00069 Protein kinase domain JQX13_22615 PF02913 FAD linked oxidases, C-terminal domain JQX13_22615 PF01565 FAD binding domain JQX13_22630 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal JQX13_22630 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal JQX13_22645 PF00149 Calcineurin-like phosphoesterase JQX13_22660 PF02567 Phenazine biosynthesis-like protein JQX13_22685 PF01695 IstB-like ATP binding protein JQX13_22760 PF00149 Calcineurin-like phosphoesterase JQX13_22760 PF12320 Type 5 capsule protein repressor C-terminal domain JQX13_22785 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_22810 PF12706 Beta-lactamase superfamily domain JQX13_22820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQX13_22820 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_22830 PF04945 YHS domain JQX13_22835 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_22835 PF03413 Peptidase propeptide and YPEB domain JQX13_22835 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_22835 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_22845 PF00106 short chain dehydrogenase JQX13_22855 PF00355 Rieske [2Fe-2S] domain JQX13_22875 PF00270 DEAD/DEAH box helicase JQX13_22875 PF00271 Helicase conserved C-terminal domain JQX13_22875 PF08494 DEAD/H associated JQX13_22905 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_22910 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_22915 PF17912 MalK OB fold domain JQX13_22915 PF00005 ABC transporter JQX13_22920 PF17912 MalK OB fold domain JQX13_22920 PF00005 ABC transporter JQX13_22930 PF08446 PAS fold JQX13_22930 PF00512 His Kinase A (phospho-acceptor) domain JQX13_22930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_22930 PF01590 GAF domain JQX13_22930 PF00360 Phytochrome region JQX13_22935 PF00072 Response regulator receiver domain JQX13_22940 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JQX13_22940 PF08448 PAS fold JQX13_22940 PF00672 HAMP domain JQX13_22940 PF00512 His Kinase A (phospho-acceptor) domain JQX13_22940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_22945 PF04238 Protein of unknown function (DUF420) JQX13_22975 PF00571 CBS domain JQX13_22990 PF07687 Peptidase dimerisation domain JQX13_22990 PF01546 Peptidase family M20/M25/M40 JQX13_23000 PF00990 Diguanylate cyclase, GGDEF domain JQX13_23000 PF00072 Response regulator receiver domain JQX13_23015 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_23015 PF13665 Domain of unknown function (DUF4150) JQX13_23115 PF02913 FAD linked oxidases, C-terminal domain JQX13_23115 PF01565 FAD binding domain JQX13_23125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_23125 PF05697 Bacterial trigger factor protein (TF) JQX13_23125 PF05698 Bacterial trigger factor protein (TF) C-terminus JQX13_23135 PF00672 HAMP domain JQX13_23135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_23140 PF16884 N-terminal domain of oxidoreductase JQX13_23140 PF00107 Zinc-binding dehydrogenase JQX13_23145 PF00106 short chain dehydrogenase JQX13_23155 PF03466 LysR substrate binding domain JQX13_23155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_23160 PF00512 His Kinase A (phospho-acceptor) domain JQX13_23160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_23165 PF02264 LamB porin JQX13_23175 PF00691 OmpA family JQX13_23175 PF13677 Membrane MotB of proton-channel complex MotA/MotB JQX13_23185 PF02559 CarD-like/TRCF domain JQX13_23185 PF17757 UvrB interaction domain JQX13_23185 PF00271 Helicase conserved C-terminal domain JQX13_23185 PF03461 TRCF domain JQX13_23185 PF00270 DEAD/DEAH box helicase JQX13_23205 PF00543 Nitrogen regulatory protein P-II JQX13_23210 PF00398 Ribosomal RNA adenine dimethylase JQX13_23215 PF13614 AAA domain JQX13_23220 PF00534 Glycosyl transferases group 1 JQX13_23220 PF13439 Glycosyltransferase Family 4 JQX13_23235 PF13411 MerR HTH family regulatory protein JQX13_23250 PF00561 alpha/beta hydrolase fold JQX13_23260 PF05576 PS-10 peptidase S37 JQX13_23265 PF07995 Glucose / Sorbosone dehydrogenase JQX13_23285 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_23285 PF00107 Zinc-binding dehydrogenase JQX13_23290 PF05717 IS66 Orf2 like protein JQX13_23325 PF01348 Type II intron maturase JQX13_23325 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_23365 PF00534 Glycosyl transferases group 1 JQX13_23365 PF13439 Glycosyltransferase Family 4 JQX13_23370 PF00534 Glycosyl transferases group 1 JQX13_23370 PF13439 Glycosyltransferase Family 4 JQX13_23395 PF00535 Glycosyl transferase family 2 JQX13_23405 PF00534 Glycosyl transferases group 1 JQX13_23405 PF13439 Glycosyltransferase Family 4 JQX13_23410 PF00953 Glycosyl transferase family 4 JQX13_23425 PF04235 Protein of unknown function (DUF418) JQX13_23435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JQX13_23435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JQX13_23435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JQX13_23460 PF04996 Succinylarginine dihydrolase JQX13_23465 PF03279 Bacterial lipid A biosynthesis acyltransferase JQX13_23480 PF00005 ABC transporter JQX13_23480 PF12399 Branched-chain amino acid ATP-binding cassette transporter JQX13_23485 PF00309 Sigma-54 factor, Activator interacting domain (AID) JQX13_23485 PF04963 Sigma-54 factor, core binding domain JQX13_23485 PF04552 Sigma-54, DNA binding domain JQX13_23510 PF01425 Amidase JQX13_23515 PF00743 Flavin-binding monooxygenase-like JQX13_23540 PF13439 Glycosyltransferase Family 4 JQX13_23560 PF00069 Protein kinase domain JQX13_23560 PF03793 PASTA domain JQX13_23565 PF04389 Peptidase family M28 JQX13_23580 PF13802 Galactose mutarotase-like JQX13_23580 PF17137 Domain of unknown function (DUF5110) JQX13_23580 PF16338 Domain of unknown function (DUF4968) JQX13_23580 PF01055 Glycosyl hydrolases family 31 JQX13_23585 PF01547 Bacterial extracellular solute-binding protein JQX13_23605 PF00923 Transaldolase/Fructose-6-phosphate aldolase JQX13_23610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JQX13_23615 PF12833 Helix-turn-helix domain JQX13_23620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_23620 PF00497 Bacterial extracellular solute-binding proteins, family 3 JQX13_23620 PF00512 His Kinase A (phospho-acceptor) domain JQX13_23620 PF00072 Response regulator receiver domain JQX13_23620 PF00989 PAS fold JQX13_23620 PF01627 Hpt domain JQX13_23625 PF00672 HAMP domain JQX13_23625 PF00512 His Kinase A (phospho-acceptor) domain JQX13_23625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_23630 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JQX13_23630 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JQX13_23635 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_23635 PF01915 Glycosyl hydrolase family 3 C-terminal domain JQX13_23640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JQX13_23640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JQX13_23650 PF02580 D-Tyr-tRNA(Tyr) deacylase JQX13_23675 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JQX13_23680 PF00436 Single-strand binding protein family JQX13_23685 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JQX13_23690 PF01430 Hsp33 protein JQX13_23695 PF00156 Phosphoribosyl transferase domain JQX13_23700 PF09107 Elongation factor SelB, winged helix JQX13_23700 PF03144 Elongation factor Tu domain 2 JQX13_23700 PF00009 Elongation factor Tu GTP binding domain JQX13_23700 PF09106 Elongation factor SelB, winged helix JQX13_23705 PF00512 His Kinase A (phospho-acceptor) domain JQX13_23705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_23710 PF02954 Bacterial regulatory protein, Fis family JQX13_23710 PF00158 Sigma-54 interaction domain JQX13_23710 PF00072 Response regulator receiver domain JQX13_23715 PF00361 Proton-conducting membrane transporter JQX13_23720 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus JQX13_23720 PF00361 Proton-conducting membrane transporter JQX13_23725 PF00361 Proton-conducting membrane transporter JQX13_23725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JQX13_23730 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JQX13_23735 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JQX13_23740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JQX13_23740 PF10531 SLBB domain JQX13_23740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JQX13_23750 PF00072 Response regulator receiver domain JQX13_23755 PF00069 Protein kinase domain JQX13_23755 PF03793 PASTA domain JQX13_23780 PF00011 Hsp20/alpha crystallin family JQX13_23785 PF00072 Response regulator receiver domain JQX13_23785 PF00486 Transcriptional regulatory protein, C terminal JQX13_23795 PF00793 DAHP synthetase I family JQX13_23800 PF06418 CTP synthase N-terminus JQX13_23800 PF00117 Glutamine amidotransferase class-I JQX13_23810 PF00664 ABC transporter transmembrane region JQX13_23810 PF00005 ABC transporter JQX13_23815 PF02348 Cytidylyltransferase JQX13_23820 PF02350 UDP-N-acetylglucosamine 2-epimerase JQX13_23830 PF00849 RNA pseudouridylate synthase JQX13_23835 PF00069 Protein kinase domain JQX13_23835 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_23855 PF00072 Response regulator receiver domain JQX13_23865 PF01627 Hpt domain JQX13_23865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_23865 PF02895 Signal transducing histidine kinase, homodimeric domain JQX13_23865 PF01584 CheW-like domain JQX13_23865 PF09078 CheY binding JQX13_23895 PF10282 Lactonase, 7-bladed beta-propeller JQX13_23925 PF07690 Major Facilitator Superfamily JQX13_23930 PF00107 Zinc-binding dehydrogenase JQX13_23930 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_23940 PF00873 AcrB/AcrD/AcrF family JQX13_23955 PF02954 Bacterial regulatory protein, Fis family JQX13_23955 PF00072 Response regulator receiver domain JQX13_23955 PF00158 Sigma-54 interaction domain JQX13_23960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_23965 PF00156 Phosphoribosyl transferase domain JQX13_23975 PF01985 CRS1 / YhbY (CRM) domain JQX13_23980 PF01556 DnaJ C terminal domain JQX13_23980 PF00226 DnaJ domain JQX13_23990 PF01925 Sulfite exporter TauE/SafE JQX13_24000 PF02310 B12 binding domain JQX13_24000 PF01642 Methylmalonyl-CoA mutase JQX13_24005 PF00364 Biotin-requiring enzyme JQX13_24005 PF02436 Conserved carboxylase domain JQX13_24005 PF00682 HMGL-like JQX13_24010 PF02785 Biotin carboxylase C-terminal domain JQX13_24010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQX13_24010 PF00289 Biotin carboxylase, N-terminal domain JQX13_24020 PF01039 Carboxyl transferase domain JQX13_24055 PF01594 AI-2E family transporter JQX13_24065 PF09009 Exotoxin A catalytic JQX13_24065 PF09101 Exotoxin A binding JQX13_24065 PF09102 Exotoxin A, targeting JQX13_24070 PF01168 Alanine racemase, N-terminal domain JQX13_24080 PF13536 Putative multidrug resistance efflux transporter JQX13_24100 PF03515 Colicin-like bacteriocin tRNase domain JQX13_24100 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 JQX13_24120 PF00667 FAD binding domain JQX13_24120 PF00258 Flavodoxin JQX13_24120 PF00067 Cytochrome P450 JQX13_24120 PF00175 Oxidoreductase NAD-binding domain JQX13_24145 PF00891 O-methyltransferase domain JQX13_24155 PF00654 Voltage gated chloride channel JQX13_24165 PF00135 Carboxylesterase family JQX13_24170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_24180 PF02311 AraC-like ligand binding domain JQX13_24180 PF12833 Helix-turn-helix domain JQX13_24205 PF01432 Peptidase family M3 JQX13_24245 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JQX13_24245 PF06974 Protein of unknown function (DUF1298) JQX13_24250 PF03193 RsgA GTPase JQX13_24260 PF02954 Bacterial regulatory protein, Fis family JQX13_24260 PF00158 Sigma-54 interaction domain JQX13_24260 PF00072 Response regulator receiver domain JQX13_24265 PF00512 His Kinase A (phospho-acceptor) domain JQX13_24265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_24275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JQX13_24275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JQX13_24290 PF06271 RDD family JQX13_24300 PF04452 RNA methyltransferase JQX13_24315 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_24355 PF05193 Peptidase M16 inactive domain JQX13_24355 PF00675 Insulinase (Peptidase family M16) JQX13_24365 PF06969 HemN C-terminal domain JQX13_24365 PF04055 Radical SAM superfamily JQX13_24370 PF00149 Calcineurin-like phosphoesterase JQX13_24375 PF05736 OprF membrane domain JQX13_24375 PF00691 OmpA family JQX13_24390 PF17678 Glycosyl hydrolase family 92 N-terminal domain JQX13_24390 PF07971 Glycosyl hydrolase family 92 JQX13_24410 PF00069 Protein kinase domain JQX13_24410 PF03793 PASTA domain JQX13_24420 PF13458 Periplasmic binding protein JQX13_24425 PF13649 Methyltransferase domain JQX13_24430 PF02631 RecX family JQX13_24440 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_24440 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_24445 PF07690 Major Facilitator Superfamily JQX13_24455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JQX13_24455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JQX13_24460 PF01370 NAD dependent epimerase/dehydratase family JQX13_24490 PF01062 Bestrophin, RFP-TM, chloride channel JQX13_24505 PF00069 Protein kinase domain JQX13_24515 PF00072 Response regulator receiver domain JQX13_24520 PF03793 PASTA domain JQX13_24520 PF00069 Protein kinase domain JQX13_24535 PF01915 Glycosyl hydrolase family 3 C-terminal domain JQX13_24535 PF14310 Fibronectin type III-like domain JQX13_24535 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_24545 PF03422 Carbohydrate binding module (family 6) JQX13_24545 PF04616 Glycosyl hydrolases family 43 JQX13_24570 PF13427 Domain of unknown function (DUF4111) JQX13_24570 PF01909 Nucleotidyltransferase domain JQX13_24590 PF16859 Tetracyclin repressor-like, C-terminal domain JQX13_24590 PF00440 Bacterial regulatory proteins, tetR family JQX13_24615 PF01638 HxlR-like helix-turn-helix JQX13_24640 PF00106 short chain dehydrogenase JQX13_24650 PF01458 Uncharacterized protein family (UPF0051) JQX13_24655 PF00005 ABC transporter JQX13_24660 PF01458 Uncharacterized protein family (UPF0051) JQX13_24665 PF00266 Aminotransferase class-V JQX13_24670 PF01592 NifU-like N terminal domain JQX13_24675 PF01883 Iron-sulfur cluster assembly protein JQX13_24695 PF14032 PknH-like extracellular domain JQX13_24695 PF00069 Protein kinase domain JQX13_24700 PF09382 RQC domain JQX13_24700 PF00570 HRDC domain JQX13_24700 PF00270 DEAD/DEAH box helicase JQX13_24700 PF00271 Helicase conserved C-terminal domain JQX13_24700 PF16124 RecQ zinc-binding JQX13_24720 PF00360 Phytochrome region JQX13_24720 PF01590 GAF domain JQX13_24720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_24720 PF08446 PAS fold JQX13_24725 PF00158 Sigma-54 interaction domain JQX13_24725 PF00072 Response regulator receiver domain JQX13_24725 PF02954 Bacterial regulatory protein, Fis family JQX13_24730 PF01894 Uncharacterised protein family UPF0047 JQX13_24740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JQX13_24750 PF05594 Haemagluttinin repeat JQX13_24750 PF13332 Hemagglutinin repeat JQX13_24750 PF05860 haemagglutination activity domain JQX13_24750 PF13018 Extended Signal Peptide of Type V secretion system JQX13_24750 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain JQX13_24765 PF02675 S-adenosylmethionine decarboxylase JQX13_24790 PF00743 Flavin-binding monooxygenase-like JQX13_24835 PF00067 Cytochrome P450 JQX13_24910 PF12796 Ankyrin repeats (3 copies) JQX13_24930 PF13417 Glutathione S-transferase, N-terminal domain JQX13_24965 PF00440 Bacterial regulatory proteins, tetR family JQX13_24975 PF13460 NAD(P)H-binding JQX13_24975 PF11066 Protein of unknown function (DUF2867) JQX13_24985 PF07859 alpha/beta hydrolase fold JQX13_25020 PF00144 Beta-lactamase JQX13_25025 PF00440 Bacterial regulatory proteins, tetR family JQX13_25035 PF07519 Tannase and feruloyl esterase JQX13_25055 PF01047 MarR family JQX13_25055 PF00480 ROK family JQX13_25065 PF13407 Periplasmic binding protein domain JQX13_25070 PF02653 Branched-chain amino acid transport system / permease component JQX13_25075 PF00005 ABC transporter JQX13_25080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JQX13_25080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JQX13_25085 PF01261 Xylose isomerase-like TIM barrel JQX13_25090 PF04616 Glycosyl hydrolases family 43 JQX13_25095 PF10503 Esterase PHB depolymerase JQX13_25100 PF00331 Glycosyl hydrolase family 10 JQX13_25100 PF03422 Carbohydrate binding module (family 6) JQX13_25100 PF00553 Cellulose binding domain JQX13_25105 PF00457 Glycosyl hydrolases family 11 JQX13_25110 PF00571 CBS domain JQX13_25110 PF00478 IMP dehydrogenase / GMP reductase domain JQX13_25155 PF00158 Sigma-54 interaction domain JQX13_25155 PF02954 Bacterial regulatory protein, Fis family JQX13_25155 PF00072 Response regulator receiver domain JQX13_25160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25160 PF00512 His Kinase A (phospho-acceptor) domain JQX13_25160 PF00672 HAMP domain JQX13_25175 PF00982 Glycosyltransferase family 20 JQX13_25210 PF02743 Cache domain JQX13_25210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25210 PF00512 His Kinase A (phospho-acceptor) domain JQX13_25220 PF02590 Predicted SPOUT methyltransferase JQX13_25230 PF00171 Aldehyde dehydrogenase family JQX13_25265 PF00072 Response regulator receiver domain JQX13_25265 PF02954 Bacterial regulatory protein, Fis family JQX13_25265 PF00158 Sigma-54 interaction domain JQX13_25275 PF00248 Aldo/keto reductase family JQX13_25280 PF07689 KaiB domain JQX13_25280 PF00512 His Kinase A (phospho-acceptor) domain JQX13_25280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25285 PF00072 Response regulator receiver domain JQX13_25290 PF00512 His Kinase A (phospho-acceptor) domain JQX13_25290 PF01590 GAF domain JQX13_25290 PF08446 PAS fold JQX13_25290 PF00360 Phytochrome region JQX13_25290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25295 PF00989 PAS fold JQX13_25295 PF00512 His Kinase A (phospho-acceptor) domain JQX13_25310 PF18073 Rubredoxin metal binding domain JQX13_25315 PF04226 Transglycosylase associated protein JQX13_25320 PF04055 Radical SAM superfamily JQX13_25320 PF06968 Biotin and Thiamin Synthesis associated domain JQX13_25325 PF00155 Aminotransferase class I and II JQX13_25340 PF00155 Aminotransferase class I and II JQX13_25350 PF13188 PAS domain JQX13_25350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25350 PF00072 Response regulator receiver domain JQX13_25350 PF08448 PAS fold JQX13_25350 PF00512 His Kinase A (phospho-acceptor) domain JQX13_25355 PF00072 Response regulator receiver domain JQX13_25360 PF01590 GAF domain JQX13_25360 PF08446 PAS fold JQX13_25360 PF00360 Phytochrome region JQX13_25360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25360 PF00512 His Kinase A (phospho-acceptor) domain JQX13_25365 PF03169 OPT oligopeptide transporter protein JQX13_25370 PF01494 FAD binding domain JQX13_25380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_25380 PF02743 Cache domain JQX13_25380 PF00672 HAMP domain JQX13_25390 PF14765 Polyketide synthase dehydratase JQX13_25390 PF08659 KR domain JQX13_25390 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_25390 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_25390 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_25390 PF00550 Phosphopantetheine attachment site JQX13_25400 PF08659 KR domain JQX13_25400 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_25400 PF00550 Phosphopantetheine attachment site JQX13_25400 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_25400 PF00698 Acyl transferase domain JQX13_25400 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_25405 PF07963 Prokaryotic N-terminal methylation motif JQX13_25405 PF08334 Type II secretion system (T2SS), protein G JQX13_25425 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JQX13_25425 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JQX13_25430 PF03600 Citrate transporter JQX13_25430 PF02080 TrkA-C domain JQX13_25435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25435 PF00512 His Kinase A (phospho-acceptor) domain JQX13_25435 PF13493 Domain of unknown function (DUF4118) JQX13_25435 PF02702 Osmosensitive K+ channel His kinase sensor domain JQX13_25450 PF00072 Response regulator receiver domain JQX13_25450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_25470 PF00749 tRNA synthetases class I (E and Q), catalytic domain JQX13_25485 PF01494 FAD binding domain JQX13_25495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JQX13_25495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JQX13_25505 PF02463 RecF/RecN/SMC N terminal domain JQX13_25510 PF03976 Polyphosphate kinase 2 (PPK2) JQX13_25515 PF03551 Transcriptional regulator PadR-like family JQX13_25520 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JQX13_25560 PF03190 Protein of unknown function, DUF255 JQX13_25585 PF01966 HD domain JQX13_25590 PF16123 Hydroxyacylglutathione hydrolase C-terminus JQX13_25590 PF00753 Metallo-beta-lactamase superfamily JQX13_25595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JQX13_25595 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JQX13_25600 PF00186 Dihydrofolate reductase JQX13_25605 PF00303 Thymidylate synthase JQX13_25610 PF01923 Cobalamin adenosyltransferase JQX13_25615 PF08331 Domain of unknown function (DUF1730) JQX13_25630 PF03631 Virulence factor BrkB JQX13_25635 PF01435 Peptidase family M48 JQX13_25640 PF02735 Ku70/Ku80 beta-barrel domain JQX13_25670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JQX13_25670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JQX13_25675 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JQX13_25675 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JQX13_25675 PF06827 Zinc finger found in FPG and IleRS JQX13_25690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JQX13_25690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JQX13_25695 PF00701 Dihydrodipicolinate synthetase family JQX13_25700 PF01113 Dihydrodipicolinate reductase, N-terminus JQX13_25700 PF05173 Dihydrodipicolinate reductase, C-terminus JQX13_25705 PF01557 Fumarylacetoacetate (FAA) hydrolase family JQX13_25710 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JQX13_25720 PF13977 BetI-type transcriptional repressor, C-terminal JQX13_25720 PF00440 Bacterial regulatory proteins, tetR family JQX13_25725 PF00667 FAD binding domain JQX13_25725 PF00258 Flavodoxin JQX13_25725 PF00175 Oxidoreductase NAD-binding domain JQX13_25725 PF00067 Cytochrome P450 JQX13_25760 PF00571 CBS domain JQX13_25760 PF01380 SIS domain JQX13_25765 PF00923 Transaldolase/Fructose-6-phosphate aldolase JQX13_25775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_25775 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_25775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_25780 PF01012 Electron transfer flavoprotein domain JQX13_25785 PF00766 Electron transfer flavoprotein FAD-binding domain JQX13_25785 PF01012 Electron transfer flavoprotein domain JQX13_25840 PF01479 S4 domain JQX13_25840 PF00849 RNA pseudouridylate synthase JQX13_25845 PF17092 Penicillin-binding protein OB-like domain JQX13_25845 PF00912 Transglycosylase JQX13_25845 PF00905 Penicillin binding protein transpeptidase domain JQX13_25850 PF00106 short chain dehydrogenase JQX13_25855 PF02798 Glutathione S-transferase, N-terminal domain JQX13_25855 PF00043 Glutathione S-transferase, C-terminal domain JQX13_25865 PF00850 Histone deacetylase domain JQX13_25870 PF08447 PAS fold JQX13_25870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_25870 PF13426 PAS domain JQX13_25880 PF02416 mttA/Hcf106 family JQX13_25885 PF00902 Sec-independent protein translocase protein (TatC) JQX13_25895 PF01520 N-acetylmuramoyl-L-alanine amidase JQX13_25895 PF01471 Putative peptidoglycan binding domain JQX13_25920 PF00742 Homoserine dehydrogenase JQX13_25920 PF03447 Homoserine dehydrogenase, NAD binding domain JQX13_25920 PF01842 ACT domain JQX13_25920 PF00696 Amino acid kinase family JQX13_25920 PF13840 ACT domain JQX13_25925 PF01053 Cys/Met metabolism PLP-dependent enzyme JQX13_25930 PF02397 Bacterial sugar transferase JQX13_25935 PF01048 Phosphorylase superfamily JQX13_25950 PF00171 Aldehyde dehydrogenase family JQX13_25955 PF00248 Aldo/keto reductase family JQX13_25960 PF00072 Response regulator receiver domain JQX13_25965 PF00085 Thioredoxin JQX13_25990 PF00108 Thiolase, N-terminal domain JQX13_25990 PF02803 Thiolase, C-terminal domain JQX13_26010 PF00158 Sigma-54 interaction domain JQX13_26010 PF06505 Activator of aromatic catabolism JQX13_26010 PF02954 Bacterial regulatory protein, Fis family JQX13_26010 PF02830 V4R domain JQX13_26015 PF04264 YceI-like domain JQX13_26040 PF08757 CotH kinase protein JQX13_26045 PF00291 Pyridoxal-phosphate dependent enzyme JQX13_26045 PF13291 ACT domain JQX13_26050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JQX13_26050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JQX13_26060 PF14032 PknH-like extracellular domain JQX13_26060 PF00069 Protein kinase domain JQX13_26065 PF00270 DEAD/DEAH box helicase JQX13_26065 PF00271 Helicase conserved C-terminal domain JQX13_26070 PF04545 Sigma-70, region 4 JQX13_26070 PF04539 Sigma-70 region 3 JQX13_26070 PF00140 Sigma-70 factor, region 1.2 JQX13_26070 PF04542 Sigma-70 region 2 JQX13_26110 PF01875 Memo-like protein JQX13_26155 PF01695 IstB-like ATP binding protein JQX13_26180 PF12833 Helix-turn-helix domain JQX13_26180 PF12852 Cupin JQX13_26185 PF13460 NAD(P)H-binding JQX13_26230 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JQX13_26230 PF04616 Glycosyl hydrolases family 43 JQX13_26260 PF01594 AI-2E family transporter JQX13_26265 PF00873 AcrB/AcrD/AcrF family JQX13_26275 PF00701 Dihydrodipicolinate synthetase family JQX13_26280 PF00171 Aldehyde dehydrogenase family JQX13_26285 PF07690 Major Facilitator Superfamily JQX13_26290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JQX13_26290 PF13378 Enolase C-terminal domain-like JQX13_26300 PF02913 FAD linked oxidases, C-terminal domain JQX13_26300 PF01565 FAD binding domain JQX13_26305 PF00884 Sulfatase JQX13_26310 PF00455 DeoR C terminal sensor domain JQX13_26310 PF08220 DeoR-like helix-turn-helix domain JQX13_26315 PF00293 NUDIX domain JQX13_26335 PF04072 Leucine carboxyl methyltransferase JQX13_26355 PF07519 Tannase and feruloyl esterase JQX13_26385 PF01638 HxlR-like helix-turn-helix JQX13_26400 PF00440 Bacterial regulatory proteins, tetR family JQX13_26400 PF16859 Tetracyclin repressor-like, C-terminal domain JQX13_26425 PF00551 Formyl transferase JQX13_26425 PF02911 Formyl transferase, C-terminal domain JQX13_26430 PF00512 His Kinase A (phospho-acceptor) domain JQX13_26430 PF00989 PAS fold JQX13_26430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_26450 PF18698 Histidine kinase sensor domain JQX13_26450 PF00672 HAMP domain JQX13_26450 PF00512 His Kinase A (phospho-acceptor) domain JQX13_26450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_26450 PF00989 PAS fold JQX13_26460 PF00041 Fibronectin type III domain JQX13_26460 PF00704 Glycosyl hydrolases family 18 JQX13_26465 PF00704 Glycosyl hydrolases family 18 JQX13_26465 PF00041 Fibronectin type III domain JQX13_26490 PF00080 Copper/zinc superoxide dismutase (SODC) JQX13_26515 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_26515 PF17871 AAA lid domain JQX13_26515 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_26515 PF07724 AAA domain (Cdc48 subfamily) JQX13_26525 PF05947 Type VI secretion system, TssF JQX13_26535 PF05638 Type VI secretion system effector, Hcp JQX13_26540 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JQX13_26560 PF06744 Type VI secretion protein IcmF C-terminal JQX13_26560 PF14331 ImcF-related N-terminal domain JQX13_26560 PF06761 Intracellular multiplication and human macrophage-killing JQX13_26580 PF00691 OmpA family JQX13_26580 PF01389 OmpA-like transmembrane domain JQX13_26600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_26600 PF00183 Hsp90 protein JQX13_26610 PF17668 Acetyltransferase (GNAT) domain JQX13_26610 PF13530 Sterol carrier protein domain JQX13_26630 PF00474 Sodium:solute symporter family JQX13_26640 PF16177 Acetyl-coenzyme A synthetase N-terminus JQX13_26640 PF00501 AMP-binding enzyme JQX13_26640 PF13193 AMP-binding enzyme C-terminal domain JQX13_26645 PF17827 PrmC N-terminal domain JQX13_26645 PF05175 Methyltransferase small domain JQX13_26650 PF00158 Sigma-54 interaction domain JQX13_26650 PF00072 Response regulator receiver domain JQX13_26650 PF02954 Bacterial regulatory protein, Fis family JQX13_26655 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JQX13_26680 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal JQX13_26680 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal JQX13_26685 PF08241 Methyltransferase domain JQX13_26695 PF00440 Bacterial regulatory proteins, tetR family JQX13_26700 PF00440 Bacterial regulatory proteins, tetR family JQX13_26715 PF01039 Carboxyl transferase domain JQX13_26720 PF02785 Biotin carboxylase C-terminal domain JQX13_26720 PF00289 Biotin carboxylase, N-terminal domain JQX13_26720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQX13_26720 PF00364 Biotin-requiring enzyme JQX13_26725 PF13193 AMP-binding enzyme C-terminal domain JQX13_26725 PF00501 AMP-binding enzyme JQX13_26730 PF00857 Isochorismatase family JQX13_26735 PF03466 LysR substrate binding domain JQX13_26735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_26755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_26755 PF00512 His Kinase A (phospho-acceptor) domain JQX13_26780 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase JQX13_26785 PF01266 FAD dependent oxidoreductase JQX13_26795 PF00691 OmpA family JQX13_26795 PF13677 Membrane MotB of proton-channel complex MotA/MotB JQX13_26810 PF00456 Transketolase, thiamine diphosphate binding domain JQX13_26815 PF02779 Transketolase, pyrimidine binding domain JQX13_26815 PF02780 Transketolase, C-terminal domain JQX13_26820 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JQX13_26830 PF00069 Protein kinase domain JQX13_26865 PF10990 Protein of unknown function (DUF2809) JQX13_26875 PF00248 Aldo/keto reductase family JQX13_26890 PF07733 Bacterial DNA polymerase III alpha NTPase domain JQX13_26890 PF01336 OB-fold nucleic acid binding domain JQX13_26890 PF02811 PHP domain JQX13_26890 PF14579 Helix-hairpin-helix motif JQX13_26890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JQX13_26895 PF00378 Enoyl-CoA hydratase/isomerase JQX13_26915 PF00343 Carbohydrate phosphorylase JQX13_26930 PF04225 Opacity-associated protein A LysM-like domain JQX13_26930 PF01551 Peptidase family M23 JQX13_26935 PF04293 SpoVR like protein JQX13_26940 PF04285 Protein of unknown function (DUF444) JQX13_26945 PF08298 PrkA AAA domain JQX13_26945 PF06798 PrkA serine protein kinase C-terminal domain JQX13_26950 PF01627 Hpt domain JQX13_26950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_26950 PF00512 His Kinase A (phospho-acceptor) domain JQX13_26950 PF00072 Response regulator receiver domain JQX13_26950 PF00497 Bacterial extracellular solute-binding proteins, family 3 JQX13_26965 PF00072 Response regulator receiver domain JQX13_26970 PF00989 PAS fold JQX13_26970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_26970 PF00512 His Kinase A (phospho-acceptor) domain JQX13_26975 PF00072 Response regulator receiver domain JQX13_26975 PF01627 Hpt domain JQX13_26975 PF00512 His Kinase A (phospho-acceptor) domain JQX13_26975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_26975 PF00672 HAMP domain JQX13_26975 PF17149 Periplasmic sensor domain found in signal transduction proteins JQX13_26985 PF00512 His Kinase A (phospho-acceptor) domain JQX13_26985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_27000 PF02618 YceG-like family JQX13_27005 PF03652 Holliday junction resolvase JQX13_27090 PF00672 HAMP domain JQX13_27090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_27090 PF00512 His Kinase A (phospho-acceptor) domain JQX13_27105 PF02374 Anion-transporting ATPase JQX13_27110 PF02374 Anion-transporting ATPase JQX13_27120 PF13614 AAA domain JQX13_27125 PF05233 PHB accumulation regulatory domain JQX13_27125 PF07879 PHB/PHA accumulation regulator DNA-binding domain JQX13_27140 PF02416 mttA/Hcf106 family JQX13_27145 PF03009 Glycerophosphoryl diester phosphodiesterase family JQX13_27155 PF13180 PDZ domain JQX13_27155 PF03572 Peptidase family S41 JQX13_27165 PF04107 Glutamate-cysteine ligase family 2(GCS2) JQX13_27170 PF00512 His Kinase A (phospho-acceptor) domain JQX13_27170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_27175 PF01595 Cyclin M transmembrane N-terminal domain JQX13_27175 PF03471 Transporter associated domain JQX13_27175 PF00571 CBS domain JQX13_27185 PF00012 Hsp70 protein JQX13_27195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JQX13_27195 PF02272 DHHA1 domain JQX13_27195 PF01411 tRNA synthetases class II (A) JQX13_27210 PF13307 Helicase C-terminal domain JQX13_27235 PF00072 Response regulator receiver domain JQX13_27235 PF00990 Diguanylate cyclase, GGDEF domain JQX13_27240 PF02390 Putative methyltransferase JQX13_27245 PF06574 FAD synthetase JQX13_27245 PF01687 Riboflavin kinase JQX13_27250 PF00437 Type II/IV secretion system protein JQX13_27250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JQX13_27255 PF00437 Type II/IV secretion system protein JQX13_27260 PF00482 Type II secretion system (T2SS), protein F JQX13_27265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_27265 PF00989 PAS fold JQX13_27265 PF00512 His Kinase A (phospho-acceptor) domain JQX13_27270 PF00158 Sigma-54 interaction domain JQX13_27270 PF02954 Bacterial regulatory protein, Fis family JQX13_27270 PF00072 Response regulator receiver domain JQX13_27280 PF00005 ABC transporter JQX13_27290 PF14245 Type IV pilin PilA JQX13_27290 PF07963 Prokaryotic N-terminal methylation motif JQX13_27295 PF06750 Bacterial Peptidase A24 N-terminal domain JQX13_27295 PF01478 Type IV leader peptidase family JQX13_27300 PF00512 His Kinase A (phospho-acceptor) domain JQX13_27300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_27305 PF02954 Bacterial regulatory protein, Fis family JQX13_27305 PF00158 Sigma-54 interaction domain JQX13_27305 PF00072 Response regulator receiver domain JQX13_27310 PF11104 Type IV pilus assembly protein PilM; JQX13_27330 PF03958 Bacterial type II/III secretion system short domain JQX13_27330 PF07660 Secretin and TonB N terminus short domain JQX13_27330 PF00263 Bacterial type II and III secretion system protein JQX13_27330 PF11741 AMIN domain JQX13_27345 PF08207 Elongation factor P (EF-P) KOW-like domain JQX13_27345 PF09285 Elongation factor P, C-terminal JQX13_27345 PF01132 Elongation factor P (EF-P) OB domain JQX13_27350 PF00364 Biotin-requiring enzyme JQX13_27355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQX13_27355 PF00289 Biotin carboxylase, N-terminal domain JQX13_27355 PF02785 Biotin carboxylase C-terminal domain JQX13_27365 PF13401 AAA domain JQX13_27365 PF01471 Putative peptidoglycan binding domain JQX13_27375 PF01103 Surface antigen JQX13_27375 PF07244 Surface antigen variable number repeat JQX13_27380 PF03330 Lytic transglycolase JQX13_27400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JQX13_27410 PF02541 Ppx/GppA phosphatase family JQX13_27415 PF00155 Aminotransferase class I and II JQX13_27420 PF00305 Lipoxygenase JQX13_27430 PF07676 WD40-like Beta Propeller Repeat JQX13_27430 PF04052 TolB amino-terminal domain JQX13_27440 PF02472 Biopolymer transport protein ExbD/TolR JQX13_27445 PF01618 MotA/TolQ/ExbB proton channel family JQX13_27455 PF01177 Asp/Glu/Hydantoin racemase JQX13_27460 PF10520 B domain of TMEM189, localisation domain JQX13_27470 PF00005 ABC transporter JQX13_27475 PF18075 FtsX extracellular domain JQX13_27480 PF01551 Peptidase family M23 JQX13_27485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JQX13_27485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JQX13_27495 PF03572 Peptidase family S41 JQX13_27495 PF13180 PDZ domain JQX13_27510 PF00056 lactate/malate dehydrogenase, NAD binding domain JQX13_27510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JQX13_27520 PF00023 Ankyrin repeat JQX13_27520 PF12796 Ankyrin repeats (3 copies) JQX13_27525 PF00199 Catalase JQX13_27525 PF06628 Catalase-related immune-responsive JQX13_27530 PF03466 LysR substrate binding domain JQX13_27530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_27550 PF00075 RNase H JQX13_27560 PF01820 D-ala D-ala ligase N-terminus JQX13_27560 PF07478 D-ala D-ala ligase C-terminus JQX13_27585 PF02881 SRP54-type protein, helical bundle domain JQX13_27585 PF00448 SRP54-type protein, GTPase domain JQX13_27600 PF00300 Histidine phosphatase superfamily (branch 1) JQX13_27600 PF13456 Reverse transcriptase-like JQX13_27635 PF12706 Beta-lactamase superfamily domain JQX13_27640 PF01791 DeoC/LacD family aldolase JQX13_27650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JQX13_27650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JQX13_27650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JQX13_27650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JQX13_27665 PF02653 Branched-chain amino acid transport system / permease component JQX13_27670 PF02653 Branched-chain amino acid transport system / permease component JQX13_27675 PF00005 ABC transporter JQX13_27680 PF02885 Glycosyl transferase family, helical bundle domain JQX13_27680 PF00591 Glycosyl transferase family, a/b domain JQX13_27680 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JQX13_27690 PF01048 Phosphorylase superfamily JQX13_27700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JQX13_27705 PF01979 Amidohydrolase family JQX13_27735 PF02687 FtsX-like permease family JQX13_27735 PF12704 MacB-like periplasmic core domain JQX13_27735 PF00005 ABC transporter JQX13_27750 PF00069 Protein kinase domain JQX13_27770 PF04717 Type VI secretion system, phage-baseplate injector JQX13_27770 PF06715 Gp5 C-terminal repeat (3 copies) JQX13_27775 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JQX13_27775 PF01476 LysM domain JQX13_27785 PF00072 Response regulator receiver domain JQX13_27790 PF00924 Mechanosensitive ion channel JQX13_27820 PF03448 MgtE intracellular N domain JQX13_27820 PF00571 CBS domain JQX13_27820 PF01769 Divalent cation transporter JQX13_27850 PF10127 RNA repair pathway DNA polymerase beta family JQX13_27870 PF07726 ATPase family associated with various cellular activities (AAA) JQX13_27870 PF17863 AAA lid domain JQX13_27875 PF01882 Protein of unknown function DUF58 JQX13_27890 PF00092 von Willebrand factor type A domain JQX13_27920 PF00082 Subtilase family JQX13_27920 PF00082 Subtilase family JQX13_27925 PF00719 Inorganic pyrophosphatase JQX13_27935 PF00072 Response regulator receiver domain JQX13_27935 PF00486 Transcriptional regulatory protein, C terminal JQX13_27955 PF01514 Secretory protein of YscJ/FliF family JQX13_27965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JQX13_27975 PF00813 FliP family JQX13_27980 PF01313 Bacterial export proteins, family 3 JQX13_27990 PF01312 FlhB HrpN YscU SpaS Family JQX13_27995 PF00771 FHIPEP family JQX13_28000 PF00216 Bacterial DNA-binding protein JQX13_28005 PF03631 Virulence factor BrkB JQX13_28010 PF10150 Ribonuclease E/G family JQX13_28010 PF00575 S1 RNA binding domain JQX13_28010 PF10150 Ribonuclease E/G family JQX13_28010 PF00575 S1 RNA binding domain JQX13_28020 PF00708 Acylphosphatase JQX13_28025 PF01653 NAD-dependent DNA ligase adenylation domain JQX13_28025 PF12826 Helix-hairpin-helix motif JQX13_28025 PF03120 NAD-dependent DNA ligase OB-fold domain JQX13_28025 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JQX13_28025 PF00533 BRCA1 C Terminus (BRCT) domain JQX13_28030 PF07497 Rho termination factor, RNA-binding domain JQX13_28030 PF07498 Rho termination factor, N-terminal domain JQX13_28030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQX13_28040 PF01594 AI-2E family transporter JQX13_28050 PF00117 Glutamine amidotransferase class-I JQX13_28050 PF00958 GMP synthase C terminal domain JQX13_28055 PF00120 Glutamine synthetase, catalytic domain JQX13_28060 PF00465 Iron-containing alcohol dehydrogenase JQX13_28110 PF02381 MraZ protein, putative antitoxin-like JQX13_28120 PF01795 MraW methylase family JQX13_28125 PF04977 Septum formation initiator JQX13_28130 PF03717 Penicillin-binding Protein dimerisation domain JQX13_28130 PF00905 Penicillin binding protein transpeptidase domain JQX13_28135 PF01225 Mur ligase family, catalytic domain JQX13_28135 PF02875 Mur ligase family, glutamate ligase domain JQX13_28135 PF08245 Mur ligase middle domain JQX13_28140 PF08245 Mur ligase middle domain JQX13_28140 PF02875 Mur ligase family, glutamate ligase domain JQX13_28140 PF01225 Mur ligase family, catalytic domain JQX13_28145 PF00953 Glycosyl transferase family 4 JQX13_28145 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JQX13_28150 PF02875 Mur ligase family, glutamate ligase domain JQX13_28150 PF08245 Mur ligase middle domain JQX13_28155 PF01098 Cell cycle protein JQX13_28160 PF04101 Glycosyltransferase family 28 C-terminal domain JQX13_28160 PF03033 Glycosyltransferase family 28 N-terminal domain JQX13_28165 PF08245 Mur ligase middle domain JQX13_28165 PF02875 Mur ligase family, glutamate ligase domain JQX13_28165 PF01225 Mur ligase family, catalytic domain JQX13_28170 PF01565 FAD binding domain JQX13_28170 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JQX13_28175 PF07478 D-ala D-ala ligase C-terminus JQX13_28175 PF01820 D-ala D-ala ligase N-terminus JQX13_28180 PF03799 Cell division protein FtsQ JQX13_28180 PF08478 POTRA domain, FtsQ-type JQX13_28185 PF02491 SHS2 domain inserted in FTSA JQX13_28230 PF00069 Protein kinase domain JQX13_28230 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_28260 PF00144 Beta-lactamase JQX13_28265 PF16193 AAA C-terminal domain JQX13_28265 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_28265 PF12002 MgsA AAA+ ATPase C terminal JQX13_28285 PF06745 KaiC JQX13_28290 PF00158 Sigma-54 interaction domain JQX13_28290 PF00072 Response regulator receiver domain JQX13_28290 PF02954 Bacterial regulatory protein, Fis family JQX13_28295 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_28295 PF00107 Zinc-binding dehydrogenase JQX13_28300 PF01979 Amidohydrolase family JQX13_28315 PF12327 FtsZ family, C-terminal domain JQX13_28315 PF00091 Tubulin/FtsZ family, GTPase domain JQX13_28325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQX13_28325 PF00289 Biotin carboxylase, N-terminal domain JQX13_28325 PF02785 Biotin carboxylase C-terminal domain JQX13_28330 PF00364 Biotin-requiring enzyme JQX13_28335 PF00378 Enoyl-CoA hydratase/isomerase JQX13_28340 PF00486 Transcriptional regulatory protein, C terminal JQX13_28340 PF00072 Response regulator receiver domain JQX13_28350 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JQX13_28355 PF00005 ABC transporter JQX13_28375 PF00152 tRNA synthetases class II (D, K and N) JQX13_28380 PF00719 Inorganic pyrophosphatase JQX13_28390 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JQX13_28390 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JQX13_28390 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JQX13_28400 PF00293 NUDIX domain JQX13_28400 PF03099 Biotin/lipoate A/B protein ligase family JQX13_28445 PF04717 Type VI secretion system, phage-baseplate injector JQX13_28485 PF12697 Alpha/beta hydrolase family JQX13_28490 PF00067 Cytochrome P450 JQX13_28495 PF00144 Beta-lactamase JQX13_28500 PF01638 HxlR-like helix-turn-helix JQX13_28505 PF13417 Glutathione S-transferase, N-terminal domain JQX13_28505 PF14497 Glutathione S-transferase, C-terminal domain JQX13_28540 PF02595 Glycerate kinase family JQX13_28555 PF17785 PUA-like domain JQX13_28555 PF10672 S-adenosylmethionine-dependent methyltransferase JQX13_28580 PF00478 IMP dehydrogenase / GMP reductase domain JQX13_28580 PF00571 CBS domain JQX13_28585 PF10672 S-adenosylmethionine-dependent methyltransferase JQX13_28590 PF01053 Cys/Met metabolism PLP-dependent enzyme JQX13_28605 PF02659 Putative manganese efflux pump JQX13_28610 PF00571 CBS domain JQX13_28610 PF00291 Pyridoxal-phosphate dependent enzyme JQX13_28620 PF00483 Nucleotidyl transferase JQX13_28635 PF00588 SpoU rRNA Methylase family JQX13_28640 PF00684 DnaJ central domain JQX13_28640 PF01556 DnaJ C terminal domain JQX13_28640 PF00226 DnaJ domain JQX13_28645 PF00072 Response regulator receiver domain JQX13_28645 PF00486 Transcriptional regulatory protein, C terminal JQX13_28650 PF00814 Glycoprotease family JQX13_28655 PF00398 Ribosomal RNA adenine dimethylase JQX13_28670 PF01712 Deoxynucleoside kinase JQX13_28675 PF02548 Ketopantoate hydroxymethyltransferase JQX13_28680 PF02569 Pantoate-beta-alanine ligase JQX13_28685 PF01668 SmpB protein JQX13_28695 PF08308 PEGA domain JQX13_28695 PF00069 Protein kinase domain JQX13_28720 PF00795 Carbon-nitrogen hydrolase JQX13_28725 PF17384 RimP C-terminal SH3 domain JQX13_28725 PF02576 RimP N-terminal domain JQX13_28730 PF13184 NusA-like KH domain JQX13_28730 PF00575 S1 RNA binding domain JQX13_28730 PF08529 NusA N-terminal domain JQX13_28740 PF04760 Translation initiation factor IF-2, N-terminal region JQX13_28740 PF11987 Translation-initiation factor 2 JQX13_28740 PF00009 Elongation factor Tu GTP binding domain JQX13_28750 PF02033 Ribosome-binding factor A JQX13_28755 PF16198 tRNA pseudouridylate synthase B C-terminal domain JQX13_28755 PF09157 Pseudouridine synthase II TruB, C-terminal JQX13_28755 PF01509 TruB family pseudouridylate synthase (N terminal domain) JQX13_28765 PF00312 Ribosomal protein S15 JQX13_28770 PF00575 S1 RNA binding domain JQX13_28770 PF00013 KH domain JQX13_28770 PF03725 3' exoribonuclease family, domain 2 JQX13_28770 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JQX13_28770 PF01138 3' exoribonuclease family, domain 1 JQX13_28775 PF00692 dUTPase JQX13_28780 PF03793 PASTA domain JQX13_28780 PF00069 Protein kinase domain JQX13_28790 PF10397 Adenylosuccinate lyase C-terminus JQX13_28790 PF00206 Lyase JQX13_28795 PF01259 SAICAR synthetase JQX13_28815 PF17820 PDZ domain JQX13_28815 PF13180 PDZ domain JQX13_28830 PF00578 AhpC/TSA family JQX13_28840 PF00282 Pyridoxal-dependent decarboxylase conserved domain JQX13_28845 PF01389 OmpA-like transmembrane domain JQX13_28845 PF00691 OmpA family JQX13_28855 PF00675 Insulinase (Peptidase family M16) JQX13_28855 PF05193 Peptidase M16 inactive domain JQX13_28870 PF01374 Glycosyl hydrolase family 46 JQX13_28895 PF01476 LysM domain JQX13_28895 PF05257 CHAP domain JQX13_28910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_28920 PF03030 Inorganic H+ pyrophosphatase JQX13_28950 PF00067 Cytochrome P450 JQX13_28955 PF07690 Major Facilitator Superfamily JQX13_28960 PF01047 MarR family JQX13_28965 PF03992 Antibiotic biosynthesis monooxygenase JQX13_28970 PF01878 EVE domain JQX13_28985 PF02522 Aminoglycoside 3-N-acetyltransferase JQX13_28990 PF01738 Dienelactone hydrolase family JQX13_29010 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_29010 PF00672 HAMP domain JQX13_29035 PF00561 alpha/beta hydrolase fold JQX13_29040 PF12802 MarR family JQX13_29090 PF00857 Isochorismatase family JQX13_29095 PF01037 Lrp/AsnC ligand binding domain JQX13_29100 PF14508 Glycosyl-hydrolase 97 N-terminal JQX13_29100 PF10566 Glycoside hydrolase 97 JQX13_29100 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation JQX13_29120 PF00196 Bacterial regulatory proteins, luxR family JQX13_29120 PF17874 MalT-like TPR region JQX13_29135 PF07237 Protein of unknown function (DUF1428) JQX13_29165 PF04227 Indigoidine synthase A like protein JQX13_29175 PF00550 Phosphopantetheine attachment site JQX13_29175 PF13193 AMP-binding enzyme C-terminal domain JQX13_29175 PF00501 AMP-binding enzyme JQX13_29175 PF00975 Thioesterase domain JQX13_29175 PF00668 Condensation domain JQX13_29195 PF02798 Glutathione S-transferase, N-terminal domain JQX13_29200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_29200 PF03466 LysR substrate binding domain JQX13_29210 PF05698 Bacterial trigger factor protein (TF) C-terminus JQX13_29210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_29210 PF05697 Bacterial trigger factor protein (TF) JQX13_29225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQX13_29245 PF12833 Helix-turn-helix domain JQX13_29245 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JQX13_29260 PF04754 Putative transposase, YhgA-like JQX13_29280 PF07238 PilZ domain JQX13_29280 PF00069 Protein kinase domain JQX13_29300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_29300 PF00672 HAMP domain JQX13_29300 PF00512 His Kinase A (phospho-acceptor) domain JQX13_29325 PF02678 Pirin JQX13_29325 PF05726 Pirin C-terminal cupin domain JQX13_29330 PF01817 Chorismate mutase type II JQX13_29330 PF01842 ACT domain JQX13_29330 PF00800 Prephenate dehydratase JQX13_29355 PF13722 5TM C-terminal transporter carbon starvation CstA JQX13_29355 PF02554 Carbon starvation protein CstA JQX13_29360 PF04328 Selenoprotein, putative JQX13_29380 PF02608 ABC transporter substrate-binding protein PnrA-like JQX13_29405 PF12680 SnoaL-like domain JQX13_29410 PF01370 NAD dependent epimerase/dehydratase family JQX13_29430 PF00300 Histidine phosphatase superfamily (branch 1) JQX13_29435 PF00746 LPXTG cell wall anchor motif JQX13_29435 PF02872 5'-nucleotidase, C-terminal domain JQX13_29435 PF00149 Calcineurin-like phosphoesterase JQX13_29435 PF00565 Staphylococcal nuclease homologue JQX13_29440 PF00135 Carboxylesterase family JQX13_29445 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JQX13_29445 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JQX13_29450 PF00361 Proton-conducting membrane transporter JQX13_29455 PF00361 Proton-conducting membrane transporter JQX13_29455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JQX13_29460 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JQX13_29465 PF01740 STAS domain JQX13_29465 PF00916 Sulfate permease family JQX13_29470 PF04542 Sigma-70 region 2 JQX13_29470 PF08281 Sigma-70, region 4 JQX13_29480 PF12146 Serine aminopeptidase, S33 JQX13_29485 PF03551 Transcriptional regulator PadR-like family JQX13_29485 PF13847 Methyltransferase domain JQX13_29495 PF02463 RecF/RecN/SMC N terminal domain JQX13_29500 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_29500 PF03413 Peptidase propeptide and YPEB domain JQX13_29500 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_29500 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_29505 PF03413 Peptidase propeptide and YPEB domain JQX13_29505 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_29505 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_29505 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_29520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_29520 PF03466 LysR substrate binding domain JQX13_29530 PF00975 Thioesterase domain JQX13_29540 PF06832 Penicillin-Binding Protein C-terminus Family JQX13_29540 PF00912 Transglycosylase JQX13_29540 PF00905 Penicillin binding protein transpeptidase domain JQX13_29555 PF13419 Haloacid dehalogenase-like hydrolase JQX13_29575 PF13247 4Fe-4S dicluster domain JQX13_29575 PF00037 4Fe-4S binding domain JQX13_29590 PF00384 Molybdopterin oxidoreductase JQX13_29590 PF01568 Molydopterin dinucleotide binding domain JQX13_29590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JQX13_29610 PF01527 Transposase JQX13_29615 PF13333 Integrase core domain JQX13_29615 PF13276 HTH-like domain JQX13_29615 PF00665 Integrase core domain JQX13_29660 PF07963 Prokaryotic N-terminal methylation motif JQX13_29660 PF14245 Type IV pilin PilA JQX13_29670 PF00009 Elongation factor Tu GTP binding domain JQX13_29670 PF03764 Elongation factor G, domain IV JQX13_29670 PF14492 Elongation Factor G, domain II JQX13_29670 PF00679 Elongation factor G C-terminus JQX13_29675 PF00027 Cyclic nucleotide-binding domain JQX13_29675 PF13302 Acetyltransferase (GNAT) domain JQX13_29680 PF16363 GDP-mannose 4,6 dehydratase JQX13_29725 PF01594 AI-2E family transporter JQX13_29750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_29750 PF18698 Histidine kinase sensor domain JQX13_29750 PF00512 His Kinase A (phospho-acceptor) domain JQX13_29750 PF00672 HAMP domain JQX13_29750 PF00989 PAS fold JQX13_29760 PF13520 Amino acid permease JQX13_29765 PF02146 Sir2 family JQX13_29790 PF00465 Iron-containing alcohol dehydrogenase JQX13_29805 PF00149 Calcineurin-like phosphoesterase JQX13_29810 PF00912 Transglycosylase JQX13_29830 PF01739 CheR methyltransferase, SAM binding domain JQX13_29830 PF03705 CheR methyltransferase, all-alpha domain JQX13_29840 PF17200 Single Cache domain 2 JQX13_29840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_29840 PF00672 HAMP domain JQX13_29845 PF00072 Response regulator receiver domain JQX13_29845 PF01627 Hpt domain JQX13_29845 PF01584 CheW-like domain JQX13_29845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_29850 PF00072 Response regulator receiver domain JQX13_29850 PF01339 CheB methylesterase JQX13_29855 PF00072 Response regulator receiver domain JQX13_29855 PF00486 Transcriptional regulatory protein, C terminal JQX13_29900 PF00106 short chain dehydrogenase JQX13_29910 PF01965 DJ-1/PfpI family JQX13_29915 PF13419 Haloacid dehalogenase-like hydrolase JQX13_29920 PF11842 Domain of unknown function (DUF3362) JQX13_29920 PF04055 Radical SAM superfamily JQX13_29920 PF08497 Radical SAM N-terminal JQX13_29935 PF03705 CheR methyltransferase, all-alpha domain JQX13_29935 PF01739 CheR methyltransferase, SAM binding domain JQX13_29940 PF00672 HAMP domain JQX13_29940 PF00072 Response regulator receiver domain JQX13_29940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_29940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_29940 PF01627 Hpt domain JQX13_29940 PF00512 His Kinase A (phospho-acceptor) domain JQX13_29945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_29945 PF00512 His Kinase A (phospho-acceptor) domain JQX13_29955 PF00571 CBS domain JQX13_29960 PF04241 Protein of unknown function (DUF423) JQX13_29970 PF00326 Prolyl oligopeptidase family JQX13_29970 PF07676 WD40-like Beta Propeller Repeat JQX13_29970 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JQX13_29980 PF00266 Aminotransferase class-V JQX13_29985 PF00291 Pyridoxal-phosphate dependent enzyme JQX13_29990 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_30005 PF04542 Sigma-70 region 2 JQX13_30005 PF08281 Sigma-70, region 4 JQX13_30015 PF00578 AhpC/TSA family JQX13_30025 PF00285 Citrate synthase, C-terminal domain JQX13_30030 PF10459 Peptidase S46 JQX13_30045 PF02127 Aminopeptidase I zinc metalloprotease (M18) JQX13_30050 PF13545 Crp-like helix-turn-helix domain JQX13_30050 PF00027 Cyclic nucleotide-binding domain JQX13_30055 PF00069 Protein kinase domain JQX13_30060 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_30060 PF00072 Response regulator receiver domain JQX13_30065 PF00027 Cyclic nucleotide-binding domain JQX13_30065 PF04960 Glutaminase JQX13_30065 PF01740 STAS domain JQX13_30070 PF05145 Transition state regulatory protein AbrB JQX13_30075 PF00561 alpha/beta hydrolase fold JQX13_30090 PF08447 PAS fold JQX13_30090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_30090 PF08448 PAS fold JQX13_30095 PF13180 PDZ domain JQX13_30100 PF00067 Cytochrome P450 JQX13_30105 PF17755 UvrA DNA-binding domain JQX13_30105 PF00005 ABC transporter JQX13_30105 PF17760 UvrA interaction domain JQX13_30160 PF03793 PASTA domain JQX13_30160 PF00069 Protein kinase domain JQX13_30165 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_30165 PF00069 Protein kinase domain JQX13_30185 PF02335 Cytochrome c552 JQX13_30195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JQX13_30195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JQX13_30225 PF00578 AhpC/TSA family JQX13_30230 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JQX13_30245 PF01555 DNA methylase JQX13_30250 PF00375 Sodium:dicarboxylate symporter family JQX13_30255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_30275 PF02913 FAD linked oxidases, C-terminal domain JQX13_30275 PF01565 FAD binding domain JQX13_30280 PF01053 Cys/Met metabolism PLP-dependent enzyme JQX13_30285 PF01053 Cys/Met metabolism PLP-dependent enzyme JQX13_30290 PF01842 ACT domain JQX13_30290 PF13840 ACT domain JQX13_30290 PF03447 Homoserine dehydrogenase, NAD binding domain JQX13_30290 PF00742 Homoserine dehydrogenase JQX13_30290 PF00696 Amino acid kinase family JQX13_30300 PF12848 ABC transporter JQX13_30300 PF00005 ABC transporter JQX13_30305 PF00005 ABC transporter JQX13_30305 PF12848 ABC transporter JQX13_30305 PF16326 ABC transporter C-terminal domain JQX13_30310 PF00271 Helicase conserved C-terminal domain JQX13_30310 PF00270 DEAD/DEAH box helicase JQX13_30315 PF03144 Elongation factor Tu domain 2 JQX13_30315 PF03764 Elongation factor G, domain IV JQX13_30315 PF00009 Elongation factor Tu GTP binding domain JQX13_30315 PF00679 Elongation factor G C-terminus JQX13_30315 PF14492 Elongation Factor G, domain II JQX13_30325 PF01479 S4 domain JQX13_30325 PF00849 RNA pseudouridylate synthase JQX13_30340 PF00588 SpoU rRNA Methylase family JQX13_30365 PF17962 Bacterial macroglobulin domain 6 JQX13_30365 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JQX13_30365 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JQX13_30365 PF07703 Alpha-2-macroglobulin bait region domain JQX13_30365 PF01835 MG2 domain JQX13_30365 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JQX13_30365 PF00207 Alpha-2-macroglobulin family JQX13_30370 PF00041 Fibronectin type III domain JQX13_30370 PF00704 Glycosyl hydrolases family 18 JQX13_30375 PF00512 His Kinase A (phospho-acceptor) domain JQX13_30375 PF00672 HAMP domain JQX13_30375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_30380 PF00072 Response regulator receiver domain JQX13_30380 PF00486 Transcriptional regulatory protein, C terminal JQX13_30385 PF06832 Penicillin-Binding Protein C-terminus Family JQX13_30385 PF00905 Penicillin binding protein transpeptidase domain JQX13_30385 PF00912 Transglycosylase JQX13_30405 PF01593 Flavin containing amine oxidoreductase JQX13_30415 PF13091 PLD-like domain JQX13_30415 PF13396 Phospholipase_D-nuclease N-terminal JQX13_30435 PF00563 EAL domain JQX13_30435 PF12792 CSS motif domain associated with EAL JQX13_30445 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_30445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_30445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_30455 PF02687 FtsX-like permease family JQX13_30455 PF00005 ABC transporter JQX13_30455 PF12704 MacB-like periplasmic core domain JQX13_30490 PF04542 Sigma-70 region 2 JQX13_30490 PF04539 Sigma-70 region 3 JQX13_30490 PF04545 Sigma-70, region 4 JQX13_30510 PF02108 Flagellar assembly protein FliH JQX13_30515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQX13_30515 PF18269 T3SS EscN ATPase C-terminal domain JQX13_30515 PF02874 ATP synthase alpha/beta family, beta-barrel domain JQX13_30530 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JQX13_30530 PF04509 CheC-like family JQX13_30540 PF00813 FliP family JQX13_30545 PF01313 Bacterial export proteins, family 3 JQX13_30550 PF01311 Bacterial export proteins, family 1 JQX13_30555 PF01312 FlhB HrpN YscU SpaS Family JQX13_30560 PF01312 FlhB HrpN YscU SpaS Family JQX13_30630 PF00771 FHIPEP family JQX13_30635 PF16697 Inner membrane component of T3SS, cytoplasmic domain JQX13_30655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_30655 PF03466 LysR substrate binding domain JQX13_30665 PF00133 tRNA synthetases class I (I, L, M and V) JQX13_30665 PF08264 Anticodon-binding domain of tRNA JQX13_30670 PF03330 Lytic transglycolase JQX13_30705 PF17863 AAA lid domain JQX13_30705 PF07726 ATPase family associated with various cellular activities (AAA) JQX13_30725 PF12849 PBP superfamily domain JQX13_30730 PF07715 TonB-dependent Receptor Plug Domain JQX13_30730 PF00593 TonB dependent receptor JQX13_30735 PF00512 His Kinase A (phospho-acceptor) domain JQX13_30735 PF08448 PAS fold JQX13_30735 PF13188 PAS domain JQX13_30735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_30735 PF00072 Response regulator receiver domain JQX13_30760 PF13538 UvrD-like helicase C-terminal domain JQX13_30790 PF00571 CBS domain JQX13_30790 PF00478 IMP dehydrogenase / GMP reductase domain JQX13_30795 PF00462 Glutaredoxin JQX13_30800 PF00069 Protein kinase domain JQX13_30805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQX13_30805 PF07497 Rho termination factor, RNA-binding domain JQX13_30805 PF07498 Rho termination factor, N-terminal domain JQX13_30810 PF01343 Peptidase family S49 JQX13_30825 PF01751 Toprim domain JQX13_30825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_30825 PF00986 DNA gyrase B subunit, carboxyl terminus JQX13_30825 PF00204 DNA gyrase B JQX13_30830 PF00521 DNA gyrase/topoisomerase IV, subunit A JQX13_30830 PF03989 DNA gyrase C-terminal domain, beta-propeller JQX13_30850 PF00753 Metallo-beta-lactamase superfamily JQX13_30850 PF16123 Hydroxyacylglutathione hydrolase C-terminus JQX13_30860 PF10459 Peptidase S46 JQX13_30870 PF08281 Sigma-70, region 4 JQX13_30870 PF04542 Sigma-70 region 2 JQX13_30875 PF02954 Bacterial regulatory protein, Fis family JQX13_30875 PF00072 Response regulator receiver domain JQX13_30875 PF00158 Sigma-54 interaction domain JQX13_30900 PF11612 Type II secretion system (T2SS), protein J JQX13_30900 PF07963 Prokaryotic N-terminal methylation motif JQX13_30920 PF08334 Type II secretion system (T2SS), protein G JQX13_30920 PF07963 Prokaryotic N-terminal methylation motif JQX13_30930 PF00482 Type II secretion system (T2SS), protein F JQX13_30935 PF00437 Type II/IV secretion system protein JQX13_30940 PF03958 Bacterial type II/III secretion system short domain JQX13_30940 PF00263 Bacterial type II and III secretion system protein JQX13_30950 PF02954 Bacterial regulatory protein, Fis family JQX13_30950 PF00072 Response regulator receiver domain JQX13_30950 PF00158 Sigma-54 interaction domain JQX13_30960 PF00034 Cytochrome c JQX13_30960 PF03150 Di-haem cytochrome c peroxidase JQX13_31000 PF01636 Phosphotransferase enzyme family JQX13_31025 PF01022 Bacterial regulatory protein, arsR family JQX13_31030 PF01758 Sodium Bile acid symporter family JQX13_31035 PF01451 Low molecular weight phosphotyrosine protein phosphatase JQX13_31040 PF04073 Aminoacyl-tRNA editing domain JQX13_31045 PF02222 ATP-grasp domain JQX13_31045 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JQX13_31050 PF00731 AIR carboxylase JQX13_31080 PF02504 Fatty acid synthesis protein JQX13_31095 PF13419 Haloacid dehalogenase-like hydrolase JQX13_31105 PF00375 Sodium:dicarboxylate symporter family JQX13_31110 PF06483 Chitinase C JQX13_31110 PF00704 Glycosyl hydrolases family 18 JQX13_31130 PF00664 ABC transporter transmembrane region JQX13_31130 PF03412 Peptidase C39 family JQX13_31130 PF00005 ABC transporter JQX13_31140 PF05147 Lanthionine synthetase C-like protein JQX13_31140 PF13575 Domain of unknown function (DUF4135) JQX13_31150 PF00144 Beta-lactamase JQX13_31155 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JQX13_31160 PF13193 AMP-binding enzyme C-terminal domain JQX13_31160 PF00501 AMP-binding enzyme JQX13_31170 PF01209 ubiE/COQ5 methyltransferase family JQX13_31185 PF03793 PASTA domain JQX13_31185 PF00069 Protein kinase domain JQX13_31190 PF00158 Sigma-54 interaction domain JQX13_31190 PF00072 Response regulator receiver domain JQX13_31195 PF08308 PEGA domain JQX13_31195 PF00069 Protein kinase domain JQX13_31200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_31200 PF13426 PAS domain JQX13_31200 PF00072 Response regulator receiver domain JQX13_31210 PF00925 GTP cyclohydrolase II JQX13_31225 PF00561 alpha/beta hydrolase fold JQX13_31245 PF01565 FAD binding domain JQX13_31245 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding JQX13_31260 PF13193 AMP-binding enzyme C-terminal domain JQX13_31260 PF00501 AMP-binding enzyme JQX13_31270 PF08544 GHMP kinases C terminal JQX13_31270 PF10509 Galactokinase galactose-binding signature JQX13_31270 PF00288 GHMP kinases N terminal domain JQX13_31275 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JQX13_31275 PF04616 Glycosyl hydrolases family 43 JQX13_31280 PF16369 C-terminal lipocalin-like domain JQX13_31280 PF04616 Glycosyl hydrolases family 43 JQX13_31290 PF01931 Protein of unknown function DUF84 JQX13_31295 PF16363 GDP-mannose 4,6 dehydratase JQX13_31300 PF12626 Polymerase A arginine-rich C-terminus JQX13_31300 PF01743 Poly A polymerase head domain JQX13_31300 PF12627 Probable RNA and SrmB- binding site of polymerase A JQX13_31305 PF00817 impB/mucB/samB family JQX13_31305 PF11799 impB/mucB/samB family C-terminal domain JQX13_31320 PF00849 RNA pseudouridylate synthase JQX13_31325 PF07714 Protein tyrosine kinase JQX13_31330 PF01255 Putative undecaprenyl diphosphate synthase JQX13_31340 PF02163 Peptidase family M50 JQX13_31340 PF17820 PDZ domain JQX13_31345 PF03330 Lytic transglycolase JQX13_31350 PF00814 Glycoprotease family JQX13_31365 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JQX13_31370 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_31370 PF01799 [2Fe-2S] binding domain JQX13_31375 PF00672 HAMP domain JQX13_31375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_31375 PF02743 Cache domain JQX13_31385 PF02774 Semialdehyde dehydrogenase, dimerisation domain JQX13_31385 PF01118 Semialdehyde dehydrogenase, NAD binding domain JQX13_31405 PF02391 MoaE protein JQX13_31415 PF13180 PDZ domain JQX13_31415 PF02163 Peptidase family M50 JQX13_31420 PF00293 NUDIX domain JQX13_31430 PF00501 AMP-binding enzyme JQX13_31430 PF16177 Acetyl-coenzyme A synthetase N-terminus JQX13_31430 PF13193 AMP-binding enzyme C-terminal domain JQX13_31480 PF01551 Peptidase family M23 JQX13_31480 PF08460 Bacterial SH3 domain JQX13_31510 PF00694 Aconitase C-terminal domain JQX13_31515 PF00330 Aconitase family (aconitate hydratase) JQX13_31545 PF04321 RmlD substrate binding domain JQX13_31565 PF00067 Cytochrome P450 JQX13_31570 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JQX13_31570 PF00703 Glycosyl hydrolases family 2 JQX13_31570 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JQX13_31570 PF16355 Domain of unknown function (DUF4982) JQX13_31570 PF02837 Glycosyl hydrolases family 2, sugar binding domain JQX13_31605 PF00723 Glycosyl hydrolases family 15 JQX13_31620 PF01594 AI-2E family transporter JQX13_31635 PF00512 His Kinase A (phospho-acceptor) domain JQX13_31635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_31635 PF16736 Single Cache-like JQX13_31635 PF00989 PAS fold JQX13_31650 PF04239 Protein of unknown function (DUF421) JQX13_31655 PF13244 Domain of unknown function (DUF4040) JQX13_31655 PF00361 Proton-conducting membrane transporter JQX13_31655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JQX13_31660 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JQX13_31665 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JQX13_31670 PF00361 Proton-conducting membrane transporter JQX13_31675 PF01899 Na+/H+ ion antiporter subunit JQX13_31680 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JQX13_31685 PF03334 Na+/H+ antiporter subunit JQX13_31690 PF13426 PAS domain JQX13_31690 PF00512 His Kinase A (phospho-acceptor) domain JQX13_31690 PF00672 HAMP domain JQX13_31690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_31695 PF08448 PAS fold JQX13_31695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_31695 PF08447 PAS fold JQX13_31700 PF00158 Sigma-54 interaction domain JQX13_31700 PF00072 Response regulator receiver domain JQX13_31700 PF02954 Bacterial regulatory protein, Fis family JQX13_31705 PF00691 OmpA family JQX13_31715 PF03793 PASTA domain JQX13_31715 PF00069 Protein kinase domain JQX13_31755 PF01351 Ribonuclease HII JQX13_31775 PF01189 16S rRNA methyltransferase RsmB/F JQX13_31775 PF01029 NusB family JQX13_31780 PF16656 Purple acid Phosphatase, N-terminal domain JQX13_31780 PF00149 Calcineurin-like phosphoesterase JQX13_31805 PF02223 Thymidylate kinase JQX13_31825 PF00069 Protein kinase domain JQX13_31825 PF08308 PEGA domain JQX13_31830 PF00581 Rhodanese-like domain JQX13_31835 PF00899 ThiF family JQX13_31840 PF01521 Iron-sulphur cluster biosynthesis JQX13_31850 PF03061 Thioesterase superfamily JQX13_31860 PF03009 Glycerophosphoryl diester phosphodiesterase family JQX13_31865 PF00069 Protein kinase domain JQX13_31865 PF08308 PEGA domain JQX13_31900 PF02445 Quinolinate synthetase A protein JQX13_31910 PF01209 ubiE/COQ5 methyltransferase family JQX13_31915 PF00512 His Kinase A (phospho-acceptor) domain JQX13_31915 PF00072 Response regulator receiver domain JQX13_31915 PF13426 PAS domain JQX13_31915 PF08448 PAS fold JQX13_31915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_31920 PF00854 POT family JQX13_31925 PF00854 POT family JQX13_31950 PF00593 TonB dependent receptor JQX13_31970 PF07690 Major Facilitator Superfamily JQX13_31975 PF01638 HxlR-like helix-turn-helix JQX13_31985 PF01699 Sodium/calcium exchanger protein JQX13_32000 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_32000 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_32000 PF01610 Transposase JQX13_32030 PF01699 Sodium/calcium exchanger protein JQX13_32040 PF04542 Sigma-70 region 2 JQX13_32040 PF08281 Sigma-70, region 4 JQX13_32065 PF00196 Bacterial regulatory proteins, luxR family JQX13_32065 PF00072 Response regulator receiver domain JQX13_32070 PF00672 HAMP domain JQX13_32070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_32070 PF07730 Histidine kinase JQX13_32080 PF01965 DJ-1/PfpI family JQX13_32100 PF01554 MatE JQX13_32110 PF03466 LysR substrate binding domain JQX13_32110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_32115 PF13180 PDZ domain JQX13_32120 PF00293 NUDIX domain JQX13_32125 PF01156 Inosine-uridine preferring nucleoside hydrolase JQX13_32130 PF04542 Sigma-70 region 2 JQX13_32130 PF08281 Sigma-70, region 4 JQX13_32135 PF00041 Fibronectin type III domain JQX13_32135 PF00704 Glycosyl hydrolases family 18 JQX13_32140 PF03173 Putative carbohydrate binding domain JQX13_32140 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain JQX13_32140 PF00728 Glycosyl hydrolase family 20, catalytic domain JQX13_32140 PF02838 Glycosyl hydrolase family 20, domain 2 JQX13_32150 PF00367 phosphotransferase system, EIIB JQX13_32150 PF02378 Phosphotransferase system, EIIC JQX13_32155 PF02896 PEP-utilising enzyme, TIM barrel domain JQX13_32155 PF00381 PTS HPr component phosphorylation site JQX13_32155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JQX13_32155 PF00391 PEP-utilising enzyme, mobile domain JQX13_32155 PF05524 PEP-utilising enzyme, N-terminal JQX13_32160 PF01380 SIS domain JQX13_32165 PF00392 Bacterial regulatory proteins, gntR family JQX13_32165 PF07702 UTRA domain JQX13_32170 PF01380 SIS domain JQX13_32175 PF01979 Amidohydrolase family JQX13_32195 PF03109 ABC1 family JQX13_32200 PF18011 C-terminal domain found in long catalases JQX13_32200 PF06628 Catalase-related immune-responsive JQX13_32200 PF00199 Catalase JQX13_32220 PF00561 alpha/beta hydrolase fold JQX13_32245 PF04542 Sigma-70 region 2 JQX13_32245 PF08281 Sigma-70, region 4 JQX13_32270 PF07971 Glycosyl hydrolase family 92 JQX13_32270 PF17678 Glycosyl hydrolase family 92 N-terminal domain JQX13_32360 PF00144 Beta-lactamase JQX13_32450 PF12796 Ankyrin repeats (3 copies) JQX13_32460 PF02796 Helix-turn-helix domain of resolvase JQX13_32460 PF00665 Integrase core domain JQX13_32485 PF01695 IstB-like ATP binding protein JQX13_32495 PF02796 Helix-turn-helix domain of resolvase JQX13_32495 PF00665 Integrase core domain JQX13_32500 PF01695 IstB-like ATP binding protein JQX13_32530 PF01433 Peptidase family M1 domain JQX13_32530 PF11838 ERAP1-like C-terminal domain JQX13_32535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JQX13_32535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JQX13_32535 PF00378 Enoyl-CoA hydratase/isomerase JQX13_32540 PF02803 Thiolase, C-terminal domain JQX13_32540 PF00108 Thiolase, N-terminal domain JQX13_32545 PF03576 Peptidase family S58 JQX13_32550 PF01425 Amidase JQX13_32555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_32555 PF13188 PAS domain JQX13_32555 PF00072 Response regulator receiver domain JQX13_32555 PF08448 PAS fold JQX13_32555 PF00512 His Kinase A (phospho-acceptor) domain JQX13_32575 PF05190 MutS family domain IV JQX13_32575 PF05192 MutS domain III JQX13_32575 PF00488 MutS domain V JQX13_32575 PF05188 MutS domain II JQX13_32575 PF01624 MutS domain I JQX13_32580 PF00027 Cyclic nucleotide-binding domain JQX13_32580 PF13545 Crp-like helix-turn-helix domain JQX13_32585 PF02954 Bacterial regulatory protein, Fis family JQX13_32585 PF00072 Response regulator receiver domain JQX13_32585 PF00158 Sigma-54 interaction domain JQX13_32590 PF00672 HAMP domain JQX13_32590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_32615 PF00072 Response regulator receiver domain JQX13_32615 PF13188 PAS domain JQX13_32615 PF08448 PAS fold JQX13_32615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_32615 PF00512 His Kinase A (phospho-acceptor) domain JQX13_32630 PF17284 Spermidine synthase tetramerisation domain JQX13_32645 PF00106 short chain dehydrogenase JQX13_32650 PF01817 Chorismate mutase type II JQX13_32650 PF01842 ACT domain JQX13_32650 PF00800 Prephenate dehydratase JQX13_32655 PF01554 MatE JQX13_32660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JQX13_32675 PF12791 Anti-sigma factor N-terminus JQX13_32675 PF07691 PA14 domain JQX13_32680 PF03537 Glycoside-hydrolase family GH114 JQX13_32685 PF13302 Acetyltransferase (GNAT) domain JQX13_32690 PF03551 Transcriptional regulator PadR-like family JQX13_32705 PF00999 Sodium/hydrogen exchanger family JQX13_32710 PF00067 Cytochrome P450 JQX13_32715 PF01070 FMN-dependent dehydrogenase JQX13_32730 PF13302 Acetyltransferase (GNAT) domain JQX13_32735 PF00440 Bacterial regulatory proteins, tetR family JQX13_32735 PF08359 YsiA-like protein, C-terminal region JQX13_32750 PF03062 MBOAT, membrane-bound O-acyltransferase family JQX13_32755 PF01979 Amidohydrolase family JQX13_32760 PF10672 S-adenosylmethionine-dependent methyltransferase JQX13_32760 PF17785 PUA-like domain JQX13_32765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_32765 PF00512 His Kinase A (phospho-acceptor) domain JQX13_32765 PF00072 Response regulator receiver domain JQX13_32765 PF08448 PAS fold JQX13_32765 PF13426 PAS domain JQX13_32770 PF00069 Protein kinase domain JQX13_32775 PF01416 tRNA pseudouridine synthase JQX13_32800 PF00069 Protein kinase domain JQX13_32800 PF03793 PASTA domain JQX13_32805 PF01381 Helix-turn-helix JQX13_32805 PF07883 Cupin domain JQX13_32820 PF00069 Protein kinase domain JQX13_32850 PF01799 [2Fe-2S] binding domain JQX13_32850 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_32855 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JQX13_32870 PF16864 Dimerisation domain JQX13_32870 PF00891 O-methyltransferase domain JQX13_32875 PF00893 Small Multidrug Resistance protein JQX13_32895 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JQX13_32895 PF02142 MGS-like domain JQX13_32895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQX13_32910 PF13302 Acetyltransferase (GNAT) domain JQX13_32910 PF00027 Cyclic nucleotide-binding domain JQX13_32925 PF00593 TonB dependent receptor JQX13_32925 PF07715 TonB-dependent Receptor Plug Domain JQX13_32930 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_32930 PF02861 Clp amino terminal domain, pathogenicity island component JQX13_32930 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_32930 PF07724 AAA domain (Cdc48 subfamily) JQX13_32930 PF17871 AAA lid domain JQX13_32955 PF07722 Peptidase C26 JQX13_32960 PF08543 Phosphomethylpyrimidine kinase JQX13_32965 PF03796 DnaB-like helicase C terminal domain JQX13_32965 PF00772 DnaB-like helicase N terminal domain JQX13_32970 PF03948 Ribosomal protein L9, C-terminal domain JQX13_32970 PF01281 Ribosomal protein L9, N-terminal domain JQX13_32975 PF01084 Ribosomal protein S18 JQX13_32980 PF01250 Ribosomal protein S6 JQX13_32985 PF01195 Peptidyl-tRNA hydrolase JQX13_32990 PF01386 Ribosomal L25p family JQX13_32990 PF14693 Ribosomal protein TL5, C-terminal domain JQX13_32995 PF14572 Phosphoribosyl synthetase-associated domain JQX13_32995 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JQX13_33000 PF04026 SpoVG JQX13_33010 PF00265 Thymidine kinase JQX13_33020 PF00156 Phosphoribosyl transferase domain JQX13_33030 PF18030 RimK PreATP-grasp domain JQX13_33030 PF08443 RimK-like ATP-grasp domain JQX13_33040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_33040 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_33040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_33045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JQX13_33045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JQX13_33045 PF00378 Enoyl-CoA hydratase/isomerase JQX13_33065 PF01678 Diaminopimelate epimerase JQX13_33070 PF00072 Response regulator receiver domain JQX13_33075 PF00486 Transcriptional regulatory protein, C terminal JQX13_33075 PF00072 Response regulator receiver domain JQX13_33085 PF08447 PAS fold JQX13_33085 PF08448 PAS fold JQX13_33085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_33105 PF00106 short chain dehydrogenase JQX13_33110 PF00301 Rubredoxin JQX13_33125 PF05193 Peptidase M16 inactive domain JQX13_33125 PF00675 Insulinase (Peptidase family M16) JQX13_33130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_33130 PF00512 His Kinase A (phospho-acceptor) domain JQX13_33150 PF01435 Peptidase family M48 JQX13_33155 PF01070 FMN-dependent dehydrogenase JQX13_33160 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JQX13_33195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQX13_33195 PF00205 Thiamine pyrophosphate enzyme, central domain JQX13_33195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQX13_33200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JQX13_33200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JQX13_33230 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_33235 PF00012 Hsp70 protein JQX13_33240 PF07743 HSCB C-terminal oligomerisation domain JQX13_33245 PF01521 Iron-sulphur cluster biosynthesis JQX13_33250 PF01592 NifU-like N terminal domain JQX13_33255 PF00266 Aminotransferase class-V JQX13_33265 PF00557 Metallopeptidase family M24 JQX13_33270 PF00248 Aldo/keto reductase family JQX13_33295 PF01575 MaoC like domain JQX13_33305 PF11412 Disulphide bond corrector protein DsbC JQX13_33305 PF02683 Cytochrome C biogenesis protein transmembrane region JQX13_33335 PF00892 EamA-like transporter family JQX13_33340 PF01554 MatE JQX13_33355 PF05114 Protein of unknown function (DUF692) JQX13_33380 PF06715 Gp5 C-terminal repeat (3 copies) JQX13_33380 PF04717 Type VI secretion system, phage-baseplate injector JQX13_33390 PF05947 Type VI secretion system, TssF JQX13_33405 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JQX13_33410 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JQX13_33420 PF06744 Type VI secretion protein IcmF C-terminal JQX13_33420 PF14331 ImcF-related N-terminal domain JQX13_33420 PF06761 Intracellular multiplication and human macrophage-killing JQX13_33435 PF00158 Sigma-54 interaction domain JQX13_33435 PF06956 Regulator of RNA terminal phosphate cyclase JQX13_33440 PF01139 tRNA-splicing ligase RtcB JQX13_33445 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain JQX13_33445 PF01137 RNA 3'-terminal phosphate cyclase JQX13_33455 PF00512 His Kinase A (phospho-acceptor) domain JQX13_33455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_33455 PF00672 HAMP domain JQX13_33485 PF00072 Response regulator receiver domain JQX13_33485 PF00990 Diguanylate cyclase, GGDEF domain JQX13_33490 PF01709 Transcriptional regulator JQX13_33495 PF02075 Crossover junction endodeoxyribonuclease RuvC JQX13_33500 PF07499 RuvA, C-terminal domain JQX13_33500 PF01330 RuvA N terminal domain JQX13_33535 PF00107 Zinc-binding dehydrogenase JQX13_33535 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_33540 PF17864 RuvB AAA lid domain JQX13_33540 PF05491 RuvB C-terminal winged helix domain JQX13_33540 PF05496 Holliday junction DNA helicase RuvB P-loop domain JQX13_33550 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JQX13_33555 PF13462 Thioredoxin JQX13_33555 PF06965 Na+/H+ antiporter 1 JQX13_33565 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JQX13_33575 PF02789 Cytosol aminopeptidase family, N-terminal domain JQX13_33575 PF00883 Cytosol aminopeptidase family, catalytic domain JQX13_33585 PF01925 Sulfite exporter TauE/SafE JQX13_33600 PF09856 Predicted transcriptional regulator (DUF2083) JQX13_33600 PF06114 IrrE N-terminal-like domain JQX13_33600 PF01381 Helix-turn-helix JQX13_33615 PF05114 Protein of unknown function (DUF692) JQX13_33645 PF08281 Sigma-70, region 4 JQX13_33645 PF04542 Sigma-70 region 2 JQX13_33650 PF00266 Aminotransferase class-V JQX13_33665 PF01431 Peptidase family M13 JQX13_33665 PF05649 Peptidase family M13 JQX13_33675 PF04055 Radical SAM superfamily JQX13_33680 PF03734 L,D-transpeptidase catalytic domain JQX13_33680 PF01471 Putative peptidoglycan binding domain JQX13_33705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JQX13_33710 PF17827 PrmC N-terminal domain JQX13_33710 PF05175 Methyltransferase small domain JQX13_33715 PF00472 RF-1 domain JQX13_33715 PF03462 PCRF domain JQX13_33725 PF00571 CBS domain JQX13_33725 PF03471 Transporter associated domain JQX13_33725 PF01595 Cyclin M transmembrane N-terminal domain JQX13_33730 PF01757 Acyltransferase family JQX13_33735 PF02463 RecF/RecN/SMC N terminal domain JQX13_33735 PF06470 SMC proteins Flexible Hinge Domain JQX13_33745 PF02954 Bacterial regulatory protein, Fis family JQX13_33745 PF06506 Propionate catabolism activator JQX13_33745 PF00158 Sigma-54 interaction domain JQX13_33755 PF00462 Glutaredoxin JQX13_33760 PF00118 TCP-1/cpn60 chaperonin family JQX13_33765 PF00166 Chaperonin 10 Kd subunit JQX13_33780 PF00293 NUDIX domain JQX13_33785 PF01192 RNA polymerase Rpb6 JQX13_33795 PF13458 Periplasmic binding protein JQX13_33800 PF00083 Sugar (and other) transporter JQX13_33830 PF00005 ABC transporter JQX13_33835 PF13840 ACT domain JQX13_33835 PF00696 Amino acid kinase family JQX13_33835 PF01842 ACT domain JQX13_33875 PF00498 FHA domain JQX13_33910 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_33935 PF01695 IstB-like ATP binding protein JQX13_33955 PF00665 Integrase core domain JQX13_33960 PF03050 Transposase IS66 family JQX13_33960 PF13817 IS66 C-terminal element JQX13_33960 PF13007 Transposase C of IS166 homeodomain JQX13_33960 PF13005 zinc-finger binding domain of transposase IS66 JQX13_33975 PF00448 SRP54-type protein, GTPase domain JQX13_33975 PF02881 SRP54-type protein, helical bundle domain JQX13_33975 PF02978 Signal peptide binding domain JQX13_33990 PF11855 Protein of unknown function (DUF3375) JQX13_34030 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_34030 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_34045 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_34045 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_34055 PF01494 FAD binding domain JQX13_34075 PF00221 Aromatic amino acid lyase JQX13_34090 PF00501 AMP-binding enzyme JQX13_34090 PF13193 AMP-binding enzyme C-terminal domain JQX13_34100 PF00550 Phosphopantetheine attachment site JQX13_34105 PF00550 Phosphopantetheine attachment site JQX13_34140 PF00589 Phage integrase family JQX13_34175 PF03793 PASTA domain JQX13_34175 PF00069 Protein kinase domain JQX13_34195 PF00069 Protein kinase domain JQX13_34220 PF00069 Protein kinase domain JQX13_34230 PF00069 Protein kinase domain JQX13_34260 PF00069 Protein kinase domain JQX13_34260 PF03793 PASTA domain JQX13_34285 PF00270 DEAD/DEAH box helicase JQX13_34285 PF08494 DEAD/H associated JQX13_34285 PF00271 Helicase conserved C-terminal domain JQX13_34290 PF13195 Protein of unknown function (DUF4011) JQX13_34290 PF13086 AAA domain JQX13_34290 PF13087 AAA domain JQX13_34305 PF00271 Helicase conserved C-terminal domain JQX13_34305 PF04851 Type III restriction enzyme, res subunit JQX13_34310 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JQX13_34310 PF13538 UvrD-like helicase C-terminal domain JQX13_34310 PF14490 Helix-hairpin-helix containing domain JQX13_34355 PF13614 AAA domain JQX13_34365 PF01695 IstB-like ATP binding protein JQX13_34375 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_34375 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_34375 PF01610 Transposase JQX13_34380 PF01610 Transposase JQX13_34380 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_34380 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_34385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JQX13_34385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JQX13_34400 PF07714 Protein tyrosine kinase JQX13_34405 PF07714 Protein tyrosine kinase JQX13_34410 PF01381 Helix-turn-helix JQX13_34425 PF00069 Protein kinase domain JQX13_34425 PF01436 NHL repeat JQX13_34425 PF08450 SMP-30/Gluconolactonase/LRE-like region JQX13_34455 PF00271 Helicase conserved C-terminal domain JQX13_34455 PF00176 SNF2 family N-terminal domain JQX13_34480 PF00350 Dynamin family JQX13_34495 PF07650 KH domain JQX13_34495 PF01926 50S ribosome-binding GTPase JQX13_34530 PF03471 Transporter associated domain JQX13_34530 PF00571 CBS domain JQX13_34530 PF01595 Cyclin M transmembrane N-terminal domain JQX13_34535 PF00072 Response regulator receiver domain JQX13_34540 PF00149 Calcineurin-like phosphoesterase JQX13_34550 PF01895 PhoU domain JQX13_34555 PF00005 ABC transporter JQX13_34560 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_34565 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_34570 PF12849 PBP superfamily domain JQX13_34575 PF00486 Transcriptional regulatory protein, C terminal JQX13_34575 PF00072 Response regulator receiver domain JQX13_34590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_34590 PF00989 PAS fold JQX13_34590 PF16736 Single Cache-like JQX13_34590 PF00512 His Kinase A (phospho-acceptor) domain JQX13_34595 PF00072 Response regulator receiver domain JQX13_34595 PF00486 Transcriptional regulatory protein, C terminal JQX13_34610 PF02620 Large ribosomal RNA subunit accumulation protein YceD JQX13_34615 PF17149 Periplasmic sensor domain found in signal transduction proteins JQX13_34615 PF00672 HAMP domain JQX13_34615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_34615 PF00072 Response regulator receiver domain JQX13_34615 PF01627 Hpt domain JQX13_34615 PF00512 His Kinase A (phospho-acceptor) domain JQX13_34635 PF00072 Response regulator receiver domain JQX13_34635 PF04397 LytTr DNA-binding domain JQX13_34650 PF00512 His Kinase A (phospho-acceptor) domain JQX13_34650 PF18698 Histidine kinase sensor domain JQX13_34650 PF00989 PAS fold JQX13_34650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_34650 PF00672 HAMP domain JQX13_34655 PF01783 Ribosomal L32p protein family JQX13_34660 PF02504 Fatty acid synthesis protein JQX13_34665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JQX13_34665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JQX13_34670 PF00698 Acyl transferase domain JQX13_34680 PF00550 Phosphopantetheine attachment site JQX13_34685 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_34685 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_34690 PF02502 Ribose/Galactose Isomerase JQX13_34695 PF00464 Serine hydroxymethyltransferase JQX13_34700 PF03477 ATP cone domain JQX13_34705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JQX13_34705 PF01872 RibD C-terminal domain JQX13_34720 PF00067 Cytochrome P450 JQX13_34730 PF00677 Lumazine binding domain JQX13_34735 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JQX13_34735 PF00925 GTP cyclohydrolase II JQX13_34740 PF00885 6,7-dimethyl-8-ribityllumazine synthase JQX13_34745 PF01029 NusB family JQX13_34755 PF00072 Response regulator receiver domain JQX13_34760 PF01627 Hpt domain JQX13_34760 PF00072 Response regulator receiver domain JQX13_34760 PF01627 Hpt domain JQX13_34760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_34760 PF01584 CheW-like domain JQX13_34760 PF02895 Signal transducing histidine kinase, homodimeric domain JQX13_34760 PF02895 Signal transducing histidine kinase, homodimeric domain JQX13_34760 PF01584 CheW-like domain JQX13_34760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_34760 PF00072 Response regulator receiver domain JQX13_34765 PF01584 CheW-like domain JQX13_34770 PF01584 CheW-like domain JQX13_34780 PF01739 CheR methyltransferase, SAM binding domain JQX13_34780 PF03705 CheR methyltransferase, all-alpha domain JQX13_34785 PF00072 Response regulator receiver domain JQX13_34785 PF01339 CheB methylesterase JQX13_34805 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JQX13_34805 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JQX13_34805 PF06827 Zinc finger found in FPG and IleRS JQX13_34810 PF00072 Response regulator receiver domain JQX13_34815 PF13603 Leucyl-tRNA synthetase, Domain 2 JQX13_34815 PF08264 Anticodon-binding domain of tRNA JQX13_34815 PF09334 tRNA synthetases class I (M) JQX13_34815 PF00133 tRNA synthetases class I (I, L, M and V) JQX13_34830 PF01649 Ribosomal protein S20 JQX13_34835 PF03819 MazG nucleotide pyrophosphohydrolase domain JQX13_34845 PF14332 Domain of unknown function (DUF4388) JQX13_34845 PF01978 Sugar-specific transcriptional regulator TrmB JQX13_34855 PF07698 7TM receptor with intracellular HD hydrolase JQX13_34855 PF07697 7TM-HD extracellular JQX13_34855 PF01966 HD domain JQX13_34860 PF07883 Cupin domain JQX13_34860 PF02130 Uncharacterized protein family UPF0054 JQX13_34865 PF02743 Cache domain JQX13_34865 PF00672 HAMP domain JQX13_34865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_34870 PF00067 Cytochrome P450 JQX13_34890 PF08281 Sigma-70, region 4 JQX13_34890 PF04542 Sigma-70 region 2 JQX13_34900 PF01336 OB-fold nucleic acid binding domain JQX13_34900 PF00152 tRNA synthetases class II (D, K and N) JQX13_34905 PF12704 MacB-like periplasmic core domain JQX13_34905 PF02687 FtsX-like permease family JQX13_34910 PF00005 ABC transporter JQX13_34915 PF07244 Surface antigen variable number repeat JQX13_34915 PF01103 Surface antigen JQX13_34925 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JQX13_34925 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_34930 PF07977 FabA-like domain JQX13_34935 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_34935 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JQX13_34955 PF01914 MarC family integral membrane protein JQX13_34960 PF00535 Glycosyl transferase family 2 JQX13_34965 PF02684 Lipid-A-disaccharide synthetase JQX13_34985 PF14332 Domain of unknown function (DUF4388) JQX13_34985 PF00072 Response regulator receiver domain JQX13_34990 PF00664 ABC transporter transmembrane region JQX13_34990 PF00005 ABC transporter JQX13_35000 PF03413 Peptidase propeptide and YPEB domain JQX13_35000 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_35000 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_35000 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_35000 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_35005 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JQX13_35015 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JQX13_35020 PF01467 Cytidylyltransferase-like JQX13_35020 PF00294 pfkB family carbohydrate kinase JQX13_35025 PF01467 Cytidylyltransferase-like JQX13_35025 PF00294 pfkB family carbohydrate kinase JQX13_35030 PF03966 Trm112p-like protein JQX13_35040 PF08340 Domain of unknown function (DUF1732) JQX13_35040 PF03755 YicC-like family, N-terminal region JQX13_35045 PF00625 Guanylate kinase JQX13_35075 PF00069 Protein kinase domain JQX13_35080 PF12544 Lysine-2,3-aminomutase JQX13_35080 PF04055 Radical SAM superfamily JQX13_35085 PF04055 Radical SAM superfamily JQX13_35085 PF12544 Lysine-2,3-aminomutase JQX13_35105 PF08486 Stage II sporulation protein JQX13_35110 PF02547 Queuosine biosynthesis protein JQX13_35115 PF01702 Queuine tRNA-ribosyltransferase JQX13_35120 PF02699 Preprotein translocase subunit JQX13_35125 PF07549 SecD/SecF GG Motif JQX13_35125 PF02355 Protein export membrane protein JQX13_35130 PF02355 Protein export membrane protein JQX13_35130 PF07549 SecD/SecF GG Motif JQX13_35140 PF01368 DHH family JQX13_35140 PF02272 DHHA1 domain JQX13_35140 PF17768 RecJ OB domain JQX13_35140 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JQX13_35150 PF07690 Major Facilitator Superfamily JQX13_35165 PF01336 OB-fold nucleic acid binding domain JQX13_35165 PF00152 tRNA synthetases class II (D, K and N) JQX13_35165 PF02938 GAD domain JQX13_35170 PF00781 Diacylglycerol kinase catalytic domain JQX13_35185 PF01713 Smr domain JQX13_35185 PF00488 MutS domain V JQX13_35190 PF00271 Helicase conserved C-terminal domain JQX13_35190 PF00176 SNF2 family N-terminal domain JQX13_35210 PF07726 ATPase family associated with various cellular activities (AAA) JQX13_35210 PF17863 AAA lid domain JQX13_35225 PF00072 Response regulator receiver domain JQX13_35225 PF01966 HD domain JQX13_35230 PF01113 Dihydrodipicolinate reductase, N-terminus JQX13_35235 PF13452 N-terminal half of MaoC dehydratase JQX13_35245 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_35245 PF12806 Acetyl-CoA dehydrogenase C-terminal like JQX13_35245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_35245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_35255 PF01618 MotA/TolQ/ExbB proton channel family JQX13_35275 PF00005 ABC transporter JQX13_35275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JQX13_35280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JQX13_35280 PF00005 ABC transporter JQX13_35290 PF04542 Sigma-70 region 2 JQX13_35290 PF08281 Sigma-70, region 4 JQX13_35350 PF16697 Inner membrane component of T3SS, cytoplasmic domain JQX13_35360 PF13742 OB-fold nucleic acid binding domain JQX13_35360 PF02601 Exonuclease VII, large subunit JQX13_35370 PF00072 Response regulator receiver domain JQX13_35375 PF00348 Polyprenyl synthetase JQX13_35380 PF02779 Transketolase, pyrimidine binding domain JQX13_35380 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JQX13_35380 PF02780 Transketolase, C-terminal domain JQX13_35385 PF01728 FtsJ-like methyltransferase JQX13_35385 PF01479 S4 domain JQX13_35390 PF13419 Haloacid dehalogenase-like hydrolase JQX13_35400 PF00691 OmpA family JQX13_35400 PF05736 OprF membrane domain JQX13_35405 PF00072 Response regulator receiver domain JQX13_35405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_35405 PF13426 PAS domain JQX13_35405 PF08448 PAS fold JQX13_35405 PF00512 His Kinase A (phospho-acceptor) domain JQX13_35440 PF00156 Phosphoribosyl transferase domain JQX13_35450 PF03641 Possible lysine decarboxylase JQX13_35455 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JQX13_35455 PF01694 Rhomboid family JQX13_35460 PF02910 Fumarate reductase flavoprotein C-term JQX13_35460 PF00890 FAD binding domain JQX13_35465 PF01464 Transglycosylase SLT domain JQX13_35475 PF01066 CDP-alcohol phosphatidyltransferase JQX13_35490 PF01061 ABC-2 type transporter JQX13_35495 PF00005 ABC transporter JQX13_35495 PF14524 Wzt C-terminal domain JQX13_35510 PF05159 Capsule polysaccharide biosynthesis protein JQX13_35535 PF16363 GDP-mannose 4,6 dehydratase JQX13_35540 PF04321 RmlD substrate binding domain JQX13_35545 PF00483 Nucleotidyl transferase JQX13_35550 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JQX13_35555 PF00535 Glycosyl transferase family 2 JQX13_35565 PF03631 Virulence factor BrkB JQX13_35570 PF12848 ABC transporter JQX13_35570 PF00005 ABC transporter JQX13_35580 PF00535 Glycosyl transferase family 2 JQX13_35585 PF08241 Methyltransferase domain JQX13_35590 PF01702 Queuine tRNA-ribosyltransferase JQX13_35615 PF00311 Phosphoenolpyruvate carboxylase JQX13_35640 PF07690 Major Facilitator Superfamily JQX13_35660 PF02779 Transketolase, pyrimidine binding domain JQX13_35660 PF02780 Transketolase, C-terminal domain JQX13_35665 PF00676 Dehydrogenase E1 component JQX13_35670 PF00654 Voltage gated chloride channel JQX13_35675 PF07228 Stage II sporulation protein E (SpoIIE) JQX13_35675 PF00672 HAMP domain JQX13_35690 PF07715 TonB-dependent Receptor Plug Domain JQX13_35690 PF00593 TonB dependent receptor JQX13_35700 PF00069 Protein kinase domain JQX13_35720 PF05690 Thiazole biosynthesis protein ThiG JQX13_35720 PF01266 FAD dependent oxidoreductase JQX13_35770 PF00092 von Willebrand factor type A domain JQX13_35800 PF00106 short chain dehydrogenase JQX13_35805 PF00425 chorismate binding enzyme JQX13_35810 PF13193 AMP-binding enzyme C-terminal domain JQX13_35810 PF00501 AMP-binding enzyme JQX13_35815 PF00857 Isochorismatase family JQX13_35815 PF00550 Phosphopantetheine attachment site JQX13_35820 PF13193 AMP-binding enzyme C-terminal domain JQX13_35820 PF00501 AMP-binding enzyme JQX13_35820 PF00668 Condensation domain JQX13_35820 PF00550 Phosphopantetheine attachment site JQX13_35820 PF00975 Thioesterase domain JQX13_35825 PF01474 Class-II DAHP synthetase family JQX13_35830 PF07715 TonB-dependent Receptor Plug Domain JQX13_35830 PF00593 TonB dependent receptor JQX13_35845 PF01618 MotA/TolQ/ExbB proton channel family JQX13_35850 PF02472 Biopolymer transport protein ExbD/TolR JQX13_35870 PF04116 Fatty acid hydroxylase superfamily JQX13_35875 PF00440 Bacterial regulatory proteins, tetR family JQX13_35880 PF01926 50S ribosome-binding GTPase JQX13_35890 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JQX13_35910 PF00012 Hsp70 protein JQX13_36010 PF00069 Protein kinase domain JQX13_36030 PF01348 Type II intron maturase JQX13_36030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_36065 PF07516 SecA Wing and Scaffold domain JQX13_36065 PF01043 SecA preprotein cross-linking domain JQX13_36065 PF07517 SecA DEAD-like domain JQX13_36065 PF02810 SEC-C motif JQX13_36085 PF00072 Response regulator receiver domain JQX13_36090 PF00118 TCP-1/cpn60 chaperonin family JQX13_36095 PF00497 Bacterial extracellular solute-binding proteins, family 3 JQX13_36095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36095 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36095 PF01627 Hpt domain JQX13_36095 PF00989 PAS fold JQX13_36095 PF00072 Response regulator receiver domain JQX13_36105 PF00990 Diguanylate cyclase, GGDEF domain JQX13_36115 PF00072 Response regulator receiver domain JQX13_36115 PF00486 Transcriptional regulatory protein, C terminal JQX13_36120 PF08264 Anticodon-binding domain of tRNA JQX13_36120 PF00133 tRNA synthetases class I (I, L, M and V) JQX13_36120 PF10458 Valyl tRNA synthetase tRNA binding arm JQX13_36125 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JQX13_36125 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JQX13_36130 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase JQX13_36135 PF03061 Thioesterase superfamily JQX13_36140 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JQX13_36155 PF03747 ADP-ribosylglycohydrolase JQX13_36160 PF00113 Enolase, C-terminal TIM barrel domain JQX13_36160 PF03952 Enolase, N-terminal domain JQX13_36165 PF01975 Survival protein SurE JQX13_36170 PF01551 Peptidase family M23 JQX13_36170 PF01476 LysM domain JQX13_36185 PF00717 Peptidase S24-like JQX13_36185 PF01726 LexA DNA binding domain JQX13_36190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36190 PF00672 HAMP domain JQX13_36190 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36190 PF13426 PAS domain JQX13_36195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36195 PF00072 Response regulator receiver domain JQX13_36195 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36195 PF13188 PAS domain JQX13_36195 PF08448 PAS fold JQX13_36240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JQX13_36240 PF13632 Glycosyl transferase family group 2 JQX13_36250 PF00069 Protein kinase domain JQX13_36255 PF00595 PDZ domain JQX13_36260 PF00072 Response regulator receiver domain JQX13_36260 PF00486 Transcriptional regulatory protein, C terminal JQX13_36265 PF00491 Arginase family JQX13_36270 PF00067 Cytochrome P450 JQX13_36275 PF01207 Dihydrouridine synthase (Dus) JQX13_36280 PF08659 KR domain JQX13_36280 PF00550 Phosphopantetheine attachment site JQX13_36280 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_36280 PF00698 Acyl transferase domain JQX13_36280 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_36280 PF14765 Polyketide synthase dehydratase JQX13_36280 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_36280 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_36285 PF03448 MgtE intracellular N domain JQX13_36285 PF00571 CBS domain JQX13_36285 PF01769 Divalent cation transporter JQX13_36290 PF03884 DNA gyrase inhibitor YacG JQX13_36315 PF00672 HAMP domain JQX13_36315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36315 PF00989 PAS fold JQX13_36315 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36315 PF18698 Histidine kinase sensor domain JQX13_36410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_36410 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_36410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_36415 PF01546 Peptidase family M20/M25/M40 JQX13_36420 PF00696 Amino acid kinase family JQX13_36440 PF01118 Semialdehyde dehydrogenase, NAD binding domain JQX13_36440 PF02774 Semialdehyde dehydrogenase, dimerisation domain JQX13_36445 PF08443 RimK-like ATP-grasp domain JQX13_36455 PF02779 Transketolase, pyrimidine binding domain JQX13_36455 PF02780 Transketolase, C-terminal domain JQX13_36460 PF00456 Transketolase, thiamine diphosphate binding domain JQX13_36465 PF13193 AMP-binding enzyme C-terminal domain JQX13_36465 PF00501 AMP-binding enzyme JQX13_36470 PF13193 AMP-binding enzyme C-terminal domain JQX13_36470 PF00550 Phosphopantetheine attachment site JQX13_36470 PF00501 AMP-binding enzyme JQX13_36470 PF00668 Condensation domain JQX13_36475 PF00975 Thioesterase domain JQX13_36475 PF00550 Phosphopantetheine attachment site JQX13_36475 PF13193 AMP-binding enzyme C-terminal domain JQX13_36475 PF00501 AMP-binding enzyme JQX13_36475 PF00668 Condensation domain JQX13_36480 PF00698 Acyl transferase domain JQX13_36480 PF00550 Phosphopantetheine attachment site JQX13_36480 PF00668 Condensation domain JQX13_36480 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_36480 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_36480 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_36485 PF07690 Major Facilitator Superfamily JQX13_36490 PF13533 Biotin-lipoyl like JQX13_36495 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_36495 PF00501 AMP-binding enzyme JQX13_36495 PF13193 AMP-binding enzyme C-terminal domain JQX13_36495 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_36495 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_36495 PF00668 Condensation domain JQX13_36495 PF00550 Phosphopantetheine attachment site JQX13_36495 PF00202 Aminotransferase class-III JQX13_36500 PF01507 Phosphoadenosine phosphosulfate reductase family JQX13_36505 PF00009 Elongation factor Tu GTP binding domain JQX13_36515 PF00459 Inositol monophosphatase family JQX13_36525 PF01804 Penicillin amidase JQX13_36535 PF00668 Condensation domain JQX13_36535 PF13193 AMP-binding enzyme C-terminal domain JQX13_36535 PF00975 Thioesterase domain JQX13_36535 PF00550 Phosphopantetheine attachment site JQX13_36535 PF00501 AMP-binding enzyme JQX13_36540 PF00668 Condensation domain JQX13_36540 PF00698 Acyl transferase domain JQX13_36540 PF00550 Phosphopantetheine attachment site JQX13_36540 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_36540 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_36540 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_36545 PF00501 AMP-binding enzyme JQX13_36545 PF00668 Condensation domain JQX13_36545 PF13193 AMP-binding enzyme C-terminal domain JQX13_36545 PF00550 Phosphopantetheine attachment site JQX13_36550 PF00550 Phosphopantetheine attachment site JQX13_36550 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_36550 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_36550 PF00698 Acyl transferase domain JQX13_36550 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_36550 PF00668 Condensation domain JQX13_36555 PF00550 Phosphopantetheine attachment site JQX13_36555 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_36555 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_36555 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_36555 PF00668 Condensation domain JQX13_36555 PF00698 Acyl transferase domain JQX13_36560 PF00550 Phosphopantetheine attachment site JQX13_36560 PF00501 AMP-binding enzyme JQX13_36560 PF13193 AMP-binding enzyme C-terminal domain JQX13_36560 PF00550 Phosphopantetheine attachment site JQX13_36560 PF00668 Condensation domain JQX13_36560 PF13193 AMP-binding enzyme C-terminal domain JQX13_36560 PF00501 AMP-binding enzyme JQX13_36560 PF00668 Condensation domain JQX13_36570 PF04389 Peptidase family M28 JQX13_36620 PF00534 Glycosyl transferases group 1 JQX13_36620 PF13439 Glycosyltransferase Family 4 JQX13_36630 PF10079 Bacillithiol biosynthesis BshC JQX13_36660 PF01757 Acyltransferase family JQX13_36670 PF02441 Flavoprotein JQX13_36670 PF04127 DNA / pantothenate metabolism flavoprotein JQX13_36680 PF00535 Glycosyl transferase family 2 JQX13_36690 PF16363 GDP-mannose 4,6 dehydratase JQX13_36695 PF03167 Uracil DNA glycosylase superfamily JQX13_36710 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit JQX13_36720 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase JQX13_36720 PF02310 B12 binding domain JQX13_36725 PF03061 Thioesterase superfamily JQX13_36730 PF05853 beta-keto acid cleavage enzyme JQX13_36745 PF07690 Major Facilitator Superfamily JQX13_36755 PF03781 Sulfatase-modifying factor enzyme 1 JQX13_36785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36785 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36785 PF00672 HAMP domain JQX13_36785 PF18698 Histidine kinase sensor domain JQX13_36785 PF00989 PAS fold JQX13_36790 PF08241 Methyltransferase domain JQX13_36810 PF13536 Putative multidrug resistance efflux transporter JQX13_36820 PF00067 Cytochrome P450 JQX13_36830 PF05736 OprF membrane domain JQX13_36830 PF00691 OmpA family JQX13_36845 PF00672 HAMP domain JQX13_36845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36845 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36845 PF00989 PAS fold JQX13_36850 PF16657 Maltogenic Amylase, C-terminal domain JQX13_36850 PF02903 Alpha amylase, N-terminal ig-like domain JQX13_36850 PF00128 Alpha amylase, catalytic domain JQX13_36865 PF00072 Response regulator receiver domain JQX13_36865 PF13188 PAS domain JQX13_36865 PF08448 PAS fold JQX13_36865 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQX13_36875 PF02798 Glutathione S-transferase, N-terminal domain JQX13_36875 PF00043 Glutathione S-transferase, C-terminal domain JQX13_36945 PF03992 Antibiotic biosynthesis monooxygenase JQX13_36965 PF00497 Bacterial extracellular solute-binding proteins, family 3 JQX13_36965 PF01627 Hpt domain JQX13_36965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36965 PF00989 PAS fold JQX13_36965 PF00072 Response regulator receiver domain JQX13_36965 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36990 PF01590 GAF domain JQX13_36990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_36990 PF00512 His Kinase A (phospho-acceptor) domain JQX13_36990 PF00360 Phytochrome region JQX13_36990 PF08446 PAS fold JQX13_36995 PF00665 Integrase core domain JQX13_37010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_37010 PF00512 His Kinase A (phospho-acceptor) domain JQX13_37040 PF00691 OmpA family JQX13_37040 PF13677 Membrane MotB of proton-channel complex MotA/MotB JQX13_37045 PF01618 MotA/TolQ/ExbB proton channel family JQX13_37075 PF17760 UvrA interaction domain JQX13_37075 PF17755 UvrA DNA-binding domain JQX13_37075 PF00005 ABC transporter JQX13_37085 PF07715 TonB-dependent Receptor Plug Domain JQX13_37085 PF00593 TonB dependent receptor JQX13_37105 PF01171 PP-loop family JQX13_37105 PF11734 TilS substrate C-terminal domain JQX13_37105 PF09179 TilS substrate binding domain JQX13_37110 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_37110 PF17862 AAA+ lid domain JQX13_37110 PF06480 FtsH Extracellular JQX13_37110 PF01434 Peptidase family M41 JQX13_37115 PF00809 Pterin binding enzyme JQX13_37120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JQX13_37120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JQX13_37120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JQX13_37120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JQX13_37125 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JQX13_37130 PF01648 4'-phosphopantetheinyl transferase superfamily JQX13_37135 PF01256 Carbohydrate kinase JQX13_37135 PF03853 YjeF-related protein N-terminus JQX13_37140 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JQX13_37145 PF09186 Domain of unknown function (DUF1949) JQX13_37145 PF01205 Uncharacterized protein family UPF0029 JQX13_37150 PF00107 Zinc-binding dehydrogenase JQX13_37150 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_37155 PF03466 LysR substrate binding domain JQX13_37155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_37160 PF03065 Glycosyl hydrolase family 57 JQX13_37160 PF00041 Fibronectin type III domain JQX13_37160 PF03423 Carbohydrate binding domain (family 25) JQX13_37175 PF01979 Amidohydrolase family JQX13_37180 PF17392 Urocanase C-terminal domain JQX13_37180 PF17391 Urocanase N-terminal domain JQX13_37180 PF01175 Urocanase Rossmann-like domain JQX13_37195 PF00764 Arginosuccinate synthase JQX13_37210 PF08534 Redoxin JQX13_37215 PF01578 Cytochrome C assembly protein JQX13_37215 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JQX13_37220 PF03100 CcmE JQX13_37230 PF01578 Cytochrome C assembly protein JQX13_37240 PF00005 ABC transporter JQX13_37275 PF12805 FUSC-like inner membrane protein yccS JQX13_37290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JQX13_37290 PF00529 HlyD membrane-fusion protein of T1SS JQX13_37295 PF00873 AcrB/AcrD/AcrF family JQX13_37325 PF14310 Fibronectin type III-like domain JQX13_37325 PF01915 Glycosyl hydrolase family 3 C-terminal domain JQX13_37325 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_37335 PF00128 Alpha amylase, catalytic domain JQX13_37335 PF03423 Carbohydrate binding domain (family 25) JQX13_37335 PF01373 Glycosyl hydrolase family 14 JQX13_37390 PF00561 alpha/beta hydrolase fold JQX13_37395 PF01544 CorA-like Mg2+ transporter protein JQX13_37405 PF03413 Peptidase propeptide and YPEB domain JQX13_37405 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_37405 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_37405 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_37415 PF10672 S-adenosylmethionine-dependent methyltransferase JQX13_37415 PF17785 PUA-like domain JQX13_37450 PF00082 Subtilase family JQX13_37490 PF01553 Acyltransferase JQX13_37495 PF03485 Arginyl tRNA synthetase N terminal domain JQX13_37495 PF05746 DALR anticodon binding domain JQX13_37495 PF00750 tRNA synthetases class I (R) JQX13_37500 PF00989 PAS fold JQX13_37500 PF00512 His Kinase A (phospho-acceptor) domain JQX13_37500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_37510 PF01556 DnaJ C terminal domain JQX13_37510 PF00226 DnaJ domain JQX13_37525 PF00164 Ribosomal protein S12/S23 JQX13_37530 PF00177 Ribosomal protein S7p/S5e JQX13_37535 PF00679 Elongation factor G C-terminus JQX13_37535 PF03764 Elongation factor G, domain IV JQX13_37535 PF00009 Elongation factor Tu GTP binding domain JQX13_37535 PF03144 Elongation factor Tu domain 2 JQX13_37535 PF14492 Elongation Factor G, domain II JQX13_37540 PF03144 Elongation factor Tu domain 2 JQX13_37540 PF00009 Elongation factor Tu GTP binding domain JQX13_37540 PF03143 Elongation factor Tu C-terminal domain JQX13_37545 PF00338 Ribosomal protein S10p/S20e JQX13_37550 PF00573 Ribosomal protein L4/L1 family JQX13_37555 PF00276 Ribosomal protein L23 JQX13_37560 PF00181 Ribosomal Proteins L2, RNA binding domain JQX13_37560 PF03947 Ribosomal Proteins L2, C-terminal domain JQX13_37565 PF00203 Ribosomal protein S19 JQX13_37570 PF00237 Ribosomal protein L22p/L17e JQX13_37575 PF00189 Ribosomal protein S3, C-terminal domain JQX13_37575 PF07650 KH domain JQX13_37580 PF00252 Ribosomal protein L16p/L10e JQX13_37585 PF00831 Ribosomal L29 protein JQX13_37590 PF00366 Ribosomal protein S17 JQX13_37595 PF00238 Ribosomal protein L14p/L23e JQX13_37600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JQX13_37605 PF00673 ribosomal L5P family C-terminus JQX13_37605 PF00281 Ribosomal protein L5 JQX13_37610 PF00253 Ribosomal protein S14p/S29e JQX13_37615 PF00410 Ribosomal protein S8 JQX13_37620 PF00347 Ribosomal protein L6 JQX13_37625 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JQX13_37630 PF00333 Ribosomal protein S5, N-terminal domain JQX13_37630 PF03719 Ribosomal protein S5, C-terminal domain JQX13_37635 PF00327 Ribosomal protein L30p/L7e JQX13_37640 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JQX13_37645 PF00344 SecY translocase JQX13_37650 PF05191 Adenylate kinase, active site lid JQX13_37655 PF00557 Metallopeptidase family M24 JQX13_37660 PF01176 Translation initiation factor 1A / IF-1 JQX13_37665 PF00444 Ribosomal protein L36 JQX13_37670 PF00416 Ribosomal protein S13/S18 JQX13_37675 PF00411 Ribosomal protein S11 JQX13_37680 PF00163 Ribosomal protein S4/S9 N-terminal domain JQX13_37680 PF01479 S4 domain JQX13_37685 PF01000 RNA polymerase Rpb3/RpoA insert domain JQX13_37685 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JQX13_37685 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JQX13_37690 PF01196 Ribosomal protein L17 JQX13_37720 PF00158 Sigma-54 interaction domain JQX13_37720 PF02954 Bacterial regulatory protein, Fis family JQX13_37720 PF00072 Response regulator receiver domain JQX13_37730 PF04227 Indigoidine synthase A like protein JQX13_37735 PF14718 Soluble lytic murein transglycosylase L domain JQX13_37735 PF01464 Transglycosylase SLT domain JQX13_37760 PF00990 Diguanylate cyclase, GGDEF domain JQX13_37790 PF01119 DNA mismatch repair protein, C-terminal domain JQX13_37790 PF08676 MutL C terminal dimerisation domain JQX13_37825 PF01272 Transcription elongation factor, GreA/GreB, C-term JQX13_37825 PF03449 Transcription elongation factor, N-terminal JQX13_37830 PF00270 DEAD/DEAH box helicase JQX13_37830 PF00271 Helicase conserved C-terminal domain JQX13_37830 PF17191 RecG wedge domain JQX13_37835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_37835 PF00512 His Kinase A (phospho-acceptor) domain JQX13_37850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JQX13_37850 PF02272 DHHA1 domain JQX13_37850 PF01411 tRNA synthetases class II (A) JQX13_37875 PF00291 Pyridoxal-phosphate dependent enzyme JQX13_37880 PF04115 Ureidoglycolate lyase JQX13_37890 PF02223 Thymidylate kinase JQX13_37895 PF00994 Probable molybdopterin binding domain JQX13_37895 PF02464 Competence-damaged protein JQX13_37895 PF18146 Damage-inducible protein CinA KH domain JQX13_37905 PF13520 Amino acid permease JQX13_37910 PF01336 OB-fold nucleic acid binding domain JQX13_37910 PF00152 tRNA synthetases class II (D, K and N) JQX13_37925 PF00144 Beta-lactamase JQX13_37930 PF00378 Enoyl-CoA hydratase/isomerase JQX13_37965 PF01022 Bacterial regulatory protein, arsR family JQX13_37975 PF00069 Protein kinase domain JQX13_38005 PF07690 Major Facilitator Superfamily JQX13_38030 PF13396 Phospholipase_D-nuclease N-terminal JQX13_38030 PF13091 PLD-like domain JQX13_38080 PF00149 Calcineurin-like phosphoesterase JQX13_38100 PF02899 Phage integrase, N-terminal SAM-like domain JQX13_38100 PF00589 Phage integrase family JQX13_38125 PF03334 Na+/H+ antiporter subunit JQX13_38140 PF00361 Proton-conducting membrane transporter JQX13_38145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JQX13_38155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JQX13_38155 PF00361 Proton-conducting membrane transporter JQX13_38155 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JQX13_38155 PF13244 Domain of unknown function (DUF4040) JQX13_38170 PF05922 Peptidase inhibitor I9 JQX13_38170 PF00082 Subtilase family JQX13_38185 PF00082 Subtilase family JQX13_38185 PF05922 Peptidase inhibitor I9 JQX13_38200 PF13183 4Fe-4S dicluster domain JQX13_38200 PF02913 FAD linked oxidases, C-terminal domain JQX13_38200 PF01565 FAD binding domain JQX13_38205 PF00205 Thiamine pyrophosphate enzyme, central domain JQX13_38205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQX13_38205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQX13_38210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JQX13_38210 PF13378 Enolase C-terminal domain-like JQX13_38215 PF00067 Cytochrome P450 JQX13_38230 PF03793 PASTA domain JQX13_38230 PF00069 Protein kinase domain JQX13_38235 PF00158 Sigma-54 interaction domain JQX13_38235 PF01590 GAF domain JQX13_38250 PF00128 Alpha amylase, catalytic domain JQX13_38250 PF16657 Maltogenic Amylase, C-terminal domain JQX13_38265 PF00561 alpha/beta hydrolase fold JQX13_38280 PF01709 Transcriptional regulator JQX13_38285 PF07963 Prokaryotic N-terminal methylation motif JQX13_38285 PF00114 Pilin (bacterial filament) JQX13_38295 PF17941 Polyphosphate kinase C-terminal domain 1 JQX13_38295 PF13089 Polyphosphate kinase N-terminal domain JQX13_38295 PF02503 Polyphosphate kinase middle domain JQX13_38295 PF13090 Polyphosphate kinase C-terminal domain 2 JQX13_38355 PF00221 Aromatic amino acid lyase JQX13_38360 PF13840 ACT domain JQX13_38360 PF00696 Amino acid kinase family JQX13_38360 PF01842 ACT domain JQX13_38380 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JQX13_38380 PF12708 Pectate lyase superfamily protein JQX13_38380 PF08548 Peptidase M10 serralysin C terminal JQX13_38390 PF07683 Cobalamin synthesis protein cobW C-terminal domain JQX13_38390 PF02492 CobW/HypB/UreG, nucleotide-binding domain JQX13_38395 PF00471 Ribosomal protein L33 JQX13_38430 PF00580 UvrD/REP helicase N-terminal domain JQX13_38430 PF13361 UvrD-like helicase C-terminal domain JQX13_38435 PF00012 Hsp70 protein JQX13_38460 PF03741 Integral membrane protein TerC family JQX13_38465 PF01435 Peptidase family M48 JQX13_38470 PF00355 Rieske [2Fe-2S] domain JQX13_38475 PF01648 4'-phosphopantetheinyl transferase superfamily JQX13_38480 PF00975 Thioesterase domain JQX13_38485 PF08241 Methyltransferase domain JQX13_38485 PF00975 Thioesterase domain JQX13_38485 PF00550 Phosphopantetheine attachment site JQX13_38485 PF00668 Condensation domain JQX13_38485 PF13193 AMP-binding enzyme C-terminal domain JQX13_38485 PF00501 AMP-binding enzyme JQX13_38485 PF00391 PEP-utilising enzyme, mobile domain JQX13_38490 PF01341 Glycosyl hydrolases family 6 JQX13_38525 PF07728 AAA domain (dynein-related subfamily) JQX13_38535 PF05762 VWA domain containing CoxE-like protein JQX13_38560 PF00067 Cytochrome P450 JQX13_38565 PF00550 Phosphopantetheine attachment site JQX13_38565 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_38565 PF08659 KR domain JQX13_38565 PF14765 Polyketide synthase dehydratase JQX13_38565 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_38565 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_38565 PF00698 Acyl transferase domain JQX13_38565 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_38570 PF14765 Polyketide synthase dehydratase JQX13_38570 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_38570 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_38570 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_38570 PF00550 Phosphopantetheine attachment site JQX13_38570 PF00698 Acyl transferase domain JQX13_38570 PF08659 KR domain JQX13_38575 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_38575 PF08659 KR domain JQX13_38575 PF00550 Phosphopantetheine attachment site JQX13_38575 PF14765 Polyketide synthase dehydratase JQX13_38575 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_38575 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_38575 PF00698 Acyl transferase domain JQX13_38575 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_38580 PF08242 Methyltransferase domain JQX13_38580 PF00668 Condensation domain JQX13_38580 PF00550 Phosphopantetheine attachment site JQX13_38580 PF00501 AMP-binding enzyme JQX13_38585 PF14765 Polyketide synthase dehydratase JQX13_38585 PF00550 Phosphopantetheine attachment site JQX13_38585 PF08659 KR domain JQX13_38585 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_38585 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_38585 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_38585 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_38585 PF00698 Acyl transferase domain JQX13_38590 PF00698 Acyl transferase domain JQX13_38590 PF00550 Phosphopantetheine attachment site JQX13_38590 PF08659 KR domain JQX13_38590 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_38590 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_38590 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_38595 PF08990 Erythronolide synthase docking JQX13_38595 PF00698 Acyl transferase domain JQX13_38595 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_38595 PF14765 Polyketide synthase dehydratase JQX13_38595 PF00550 Phosphopantetheine attachment site JQX13_38595 PF08659 KR domain JQX13_38595 PF09277 Erythronolide synthase, docking JQX13_38595 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_38595 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_38595 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_38600 PF08659 KR domain JQX13_38600 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_38600 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_38600 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_38600 PF00698 Acyl transferase domain JQX13_38600 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_38600 PF14765 Polyketide synthase dehydratase JQX13_38600 PF00550 Phosphopantetheine attachment site JQX13_38620 PF02983 Alpha-lytic protease prodomain JQX13_38635 PF03358 NADPH-dependent FMN reductase JQX13_38650 PF00069 Protein kinase domain JQX13_38665 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding JQX13_38665 PF01565 FAD binding domain JQX13_38680 PF00664 ABC transporter transmembrane region JQX13_38680 PF00005 ABC transporter JQX13_38680 PF03412 Peptidase C39 family JQX13_38725 PF04389 Peptidase family M28 JQX13_38735 PF00550 Phosphopantetheine attachment site JQX13_38735 PF00668 Condensation domain JQX13_38735 PF13193 AMP-binding enzyme C-terminal domain JQX13_38735 PF00501 AMP-binding enzyme JQX13_38735 PF00501 AMP-binding enzyme JQX13_38735 PF00668 Condensation domain JQX13_38735 PF13193 AMP-binding enzyme C-terminal domain JQX13_38735 PF00550 Phosphopantetheine attachment site JQX13_38740 PF00501 AMP-binding enzyme JQX13_38740 PF13193 AMP-binding enzyme C-terminal domain JQX13_38740 PF00668 Condensation domain JQX13_38740 PF00550 Phosphopantetheine attachment site JQX13_38745 PF00501 AMP-binding enzyme JQX13_38745 PF00550 Phosphopantetheine attachment site JQX13_38745 PF13193 AMP-binding enzyme C-terminal domain JQX13_38745 PF00668 Condensation domain JQX13_38760 PF04738 Lantibiotic dehydratase, N terminus JQX13_38760 PF14028 Lantibiotic biosynthesis dehydratase C-term JQX13_38985 PF01555 DNA methylase JQX13_39000 PF02899 Phage integrase, N-terminal SAM-like domain JQX13_39000 PF00589 Phage integrase family JQX13_39090 PF00665 Integrase core domain JQX13_39110 PF01610 Transposase JQX13_39110 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_39110 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_39120 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_39120 PF16450 Proteasomal ATPase OB C-terminal domain JQX13_39120 PF17758 Proteasomal ATPase OB N-terminal domain JQX13_39210 PF01743 Poly A polymerase head domain JQX13_39210 PF12627 Probable RNA and SrmB- binding site of polymerase A JQX13_39210 PF13735 tRNA nucleotidyltransferase domain 2 putative JQX13_39225 PF01238 Phosphomannose isomerase type I JQX13_39240 PF01370 NAD dependent epimerase/dehydratase family JQX13_39245 PF16363 GDP-mannose 4,6 dehydratase JQX13_39250 PF00009 Elongation factor Tu GTP binding domain JQX13_39250 PF03144 Elongation factor Tu domain 2 JQX13_39250 PF06421 GTP-binding protein LepA C-terminus JQX13_39250 PF00679 Elongation factor G C-terminus JQX13_39255 PF10502 Signal peptidase, peptidase S26 JQX13_39265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JQX13_39265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JQX13_39270 PF01979 Amidohydrolase family JQX13_39275 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JQX13_39275 PF00117 Glutamine amidotransferase class-I JQX13_39295 PF02887 Pyruvate kinase, alpha/beta domain JQX13_39295 PF00224 Pyruvate kinase, barrel domain JQX13_39310 PF00501 AMP-binding enzyme JQX13_39315 PF00285 Citrate synthase, C-terminal domain JQX13_39320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JQX13_39325 PF01761 3-dehydroquinate synthase JQX13_39330 PF01264 Chorismate synthase JQX13_39335 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JQX13_39335 PF08501 Shikimate dehydrogenase substrate binding domain JQX13_39335 PF01488 Shikimate / quinate 5-dehydrogenase JQX13_39340 PF01761 3-dehydroquinate synthase JQX13_39340 PF01202 Shikimate kinase JQX13_39345 PF01209 ubiE/COQ5 methyltransferase family JQX13_39350 PF00425 chorismate binding enzyme JQX13_39355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQX13_39355 PF16582 Middle domain of thiamine pyrophosphate JQX13_39355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQX13_39365 PF01040 UbiA prenyltransferase family JQX13_39370 PF13378 Enolase C-terminal domain-like JQX13_39370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JQX13_39375 PF00501 AMP-binding enzyme JQX13_39375 PF13193 AMP-binding enzyme C-terminal domain JQX13_39385 PF00437 Type II/IV secretion system protein JQX13_39390 PF13847 Methyltransferase domain JQX13_39395 PF00180 Isocitrate/isopropylmalate dehydrogenase JQX13_39400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JQX13_39400 PF00056 lactate/malate dehydrogenase, NAD binding domain JQX13_39405 PF02910 Fumarate reductase flavoprotein C-term JQX13_39405 PF00890 FAD binding domain JQX13_39410 PF13183 4Fe-4S dicluster domain JQX13_39410 PF13085 2Fe-2S iron-sulfur cluster binding domain JQX13_39415 PF08442 ATP-grasp domain JQX13_39415 PF00549 CoA-ligase JQX13_39420 PF00549 CoA-ligase JQX13_39420 PF02629 CoA binding domain JQX13_39425 PF00334 Nucleoside diphosphate kinase JQX13_39430 PF04055 Radical SAM superfamily JQX13_39435 PF00886 Ribosomal protein S16 JQX13_39445 PF05239 PRC-barrel domain JQX13_39445 PF01782 RimM N-terminal domain JQX13_39450 PF01746 tRNA (Guanine-1)-methyltransferase JQX13_39455 PF01245 Ribosomal protein L19 JQX13_39465 PF02021 Uncharacterised protein family UPF0102 JQX13_39470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQX13_39480 PF08460 Bacterial SH3 domain JQX13_39480 PF01551 Peptidase family M23 JQX13_39485 PF00072 Response regulator receiver domain JQX13_39485 PF02954 Bacterial regulatory protein, Fis family JQX13_39485 PF00158 Sigma-54 interaction domain JQX13_39500 PF03023 Lipid II flippase MurJ JQX13_39505 PF00575 S1 RNA binding domain JQX13_39545 PF05491 RuvB C-terminal winged helix domain JQX13_39545 PF17864 RuvB AAA lid domain JQX13_39545 PF05496 Holliday junction DNA helicase RuvB P-loop domain JQX13_39550 PF00487 Fatty acid desaturase JQX13_39560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_39560 PF00512 His Kinase A (phospho-acceptor) domain JQX13_39580 PF00989 PAS fold JQX13_39580 PF18698 Histidine kinase sensor domain JQX13_39580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_39580 PF00672 HAMP domain JQX13_39580 PF00512 His Kinase A (phospho-acceptor) domain JQX13_39590 PF00069 Protein kinase domain JQX13_39590 PF03793 PASTA domain JQX13_39595 PF05661 Protein of unknown function (DUF808) JQX13_39605 PF03330 Lytic transglycolase JQX13_39610 PF13520 Amino acid permease JQX13_39620 PF08125 Mannitol dehydrogenase C-terminal domain JQX13_39620 PF01232 Mannitol dehydrogenase Rossmann domain JQX13_39625 PF00005 ABC transporter JQX13_39625 PF08402 TOBE domain JQX13_39630 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_39635 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_39690 PF00392 Bacterial regulatory proteins, gntR family JQX13_39690 PF00155 Aminotransferase class I and II JQX13_39735 PF00005 ABC transporter JQX13_39740 PF01032 FecCD transport family JQX13_39750 PF00202 Aminotransferase class-III JQX13_39765 PF07238 PilZ domain JQX13_39765 PF00069 Protein kinase domain JQX13_39785 PF01235 Sodium:alanine symporter family JQX13_39790 PF18698 Histidine kinase sensor domain JQX13_39790 PF00512 His Kinase A (phospho-acceptor) domain JQX13_39790 PF00989 PAS fold JQX13_39790 PF00672 HAMP domain JQX13_39790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_39795 PF00704 Glycosyl hydrolases family 18 JQX13_39800 PF00080 Copper/zinc superoxide dismutase (SODC) JQX13_39810 PF01348 Type II intron maturase JQX13_39810 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_39850 PF00067 Cytochrome P450 JQX13_39855 PF05221 S-adenosyl-L-homocysteine hydrolase JQX13_39855 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JQX13_39860 PF00308 Bacterial dnaA protein JQX13_39860 PF08299 Bacterial dnaA protein helix-turn-helix JQX13_39860 PF11638 DnaA N-terminal domain JQX13_39885 PF01593 Flavin containing amine oxidoreductase JQX13_39925 PF01476 LysM domain JQX13_39925 PF05257 CHAP domain JQX13_39930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_39930 PF03466 LysR substrate binding domain JQX13_39935 PF00557 Metallopeptidase family M24 JQX13_39990 PF08329 Chitinase A, N-terminal domain JQX13_39990 PF00704 Glycosyl hydrolases family 18 JQX13_39995 PF01474 Class-II DAHP synthetase family JQX13_40010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_40010 PF03466 LysR substrate binding domain JQX13_40015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQX13_40015 PF00205 Thiamine pyrophosphate enzyme, central domain JQX13_40015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQX13_40020 PF10369 Small subunit of acetolactate synthase JQX13_40025 PF01063 Amino-transferase class IV JQX13_40030 PF08502 LeuA allosteric (dimerisation) domain JQX13_40030 PF00682 HMGL-like JQX13_40035 PF00330 Aconitase family (aconitate hydratase) JQX13_40040 PF00694 Aconitase C-terminal domain JQX13_40045 PF00180 Isocitrate/isopropylmalate dehydrogenase JQX13_40050 PF00920 Dehydratase family JQX13_40055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JQX13_40055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JQX13_40075 PF00106 short chain dehydrogenase JQX13_40080 PF00512 His Kinase A (phospho-acceptor) domain JQX13_40080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_40080 PF00989 PAS fold JQX13_40080 PF16736 Single Cache-like JQX13_40085 PF13419 Haloacid dehalogenase-like hydrolase JQX13_40090 PF03466 LysR substrate binding domain JQX13_40090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_40105 PF00376 MerR family regulatory protein JQX13_40105 PF09278 MerR, DNA binding JQX13_40110 PF00375 Sodium:dicarboxylate symporter family JQX13_40125 PF00544 Pectate lyase JQX13_40130 PF00128 Alpha amylase, catalytic domain JQX13_40130 PF02806 Alpha amylase, C-terminal all-beta domain JQX13_40135 PF02371 Transposase IS116/IS110/IS902 family JQX13_40135 PF01548 Transposase JQX13_40145 PF12450 von Willebrand factor JQX13_40145 PF00092 von Willebrand factor type A domain JQX13_40145 PF12034 Domain of unknown function (DUF3520) JQX13_40165 PF03851 UV-endonuclease UvdE JQX13_40175 PF00313 'Cold-shock' DNA-binding domain JQX13_40190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_40190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JQX13_40210 PF01594 AI-2E family transporter JQX13_40215 PF03167 Uracil DNA glycosylase superfamily JQX13_40225 PF03129 Anticodon binding domain JQX13_40225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JQX13_40225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JQX13_40225 PF02824 TGS domain JQX13_40230 PF05198 Translation initiation factor IF-3, N-terminal domain JQX13_40230 PF00707 Translation initiation factor IF-3, C-terminal domain JQX13_40235 PF01632 Ribosomal protein L35 JQX13_40240 PF00453 Ribosomal protein L20 JQX13_40245 PF01409 tRNA synthetases class II core domain (F) JQX13_40245 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JQX13_40250 PF03147 Ferredoxin-fold anticodon binding domain JQX13_40250 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JQX13_40250 PF03484 tRNA synthetase B5 domain JQX13_40250 PF03483 B3/4 domain JQX13_40250 PF01588 Putative tRNA binding domain JQX13_40255 PF00216 Bacterial DNA-binding protein JQX13_40290 PF00069 Protein kinase domain JQX13_40315 PF01695 IstB-like ATP binding protein JQX13_40350 PF00664 ABC transporter transmembrane region JQX13_40350 PF00005 ABC transporter JQX13_40360 PF00106 short chain dehydrogenase JQX13_40380 PF00011 Hsp20/alpha crystallin family JQX13_40390 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_40410 PF00135 Carboxylesterase family JQX13_40430 PF00176 SNF2 family N-terminal domain JQX13_40430 PF00271 Helicase conserved C-terminal domain JQX13_40430 PF12419 SNF2 Helicase protein JQX13_40455 PF01483 Proprotein convertase P-domain JQX13_40455 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_40455 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_40455 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_40460 PF14521 Lysine-specific metallo-endopeptidase JQX13_40485 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_40490 PF00005 ABC transporter JQX13_40500 PF00199 Catalase JQX13_40500 PF06628 Catalase-related immune-responsive JQX13_40505 PF00158 Sigma-54 interaction domain JQX13_40505 PF01590 GAF domain JQX13_40510 PF00440 Bacterial regulatory proteins, tetR family JQX13_40515 PF00005 ABC transporter JQX13_40555 PF13665 Domain of unknown function (DUF4150) JQX13_40555 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_40570 PF00133 tRNA synthetases class I (I, L, M and V) JQX13_40570 PF08264 Anticodon-binding domain of tRNA JQX13_40580 PF00437 Type II/IV secretion system protein JQX13_40590 PF00348 Polyprenyl synthetase JQX13_40625 PF00797 N-acetyltransferase JQX13_40630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JQX13_40630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JQX13_40630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JQX13_40635 PF07690 Major Facilitator Superfamily JQX13_40640 PF06722 Protein of unknown function (DUF1205) JQX13_40645 PF16859 Tetracyclin repressor-like, C-terminal domain JQX13_40645 PF00440 Bacterial regulatory proteins, tetR family JQX13_40650 PF00082 Subtilase family JQX13_40650 PF05922 Peptidase inhibitor I9 JQX13_40670 PF07691 PA14 domain JQX13_40670 PF12791 Anti-sigma factor N-terminus JQX13_40675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_40680 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JQX13_40695 PF01053 Cys/Met metabolism PLP-dependent enzyme JQX13_40700 PF00069 Protein kinase domain JQX13_40700 PF08308 PEGA domain JQX13_40705 PF08659 KR domain JQX13_40705 PF00550 Phosphopantetheine attachment site JQX13_40705 PF18369 Polyketide synthase dimerisation element domain JQX13_40705 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_40705 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_40705 PF08990 Erythronolide synthase docking JQX13_40705 PF00975 Thioesterase domain JQX13_40705 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_40705 PF00698 Acyl transferase domain JQX13_40710 PF13191 AAA ATPase domain JQX13_40710 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_40720 PF07681 DoxX JQX13_40725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JQX13_40725 PF02806 Alpha amylase, C-terminal all-beta domain JQX13_40725 PF00128 Alpha amylase, catalytic domain JQX13_40730 PF18085 Maltokinase N-terminal cap domain JQX13_40735 PF00128 Alpha amylase, catalytic domain JQX13_40735 PF16657 Maltogenic Amylase, C-terminal domain JQX13_40740 PF00128 Alpha amylase, catalytic domain JQX13_40740 PF11896 Domain of unknown function (DUF3416) JQX13_40785 PF01475 Ferric uptake regulator family JQX13_40800 PF00990 Diguanylate cyclase, GGDEF domain JQX13_40805 PF04445 Putative SAM-dependent methyltransferase JQX13_40810 PF14245 Type IV pilin PilA JQX13_40810 PF07963 Prokaryotic N-terminal methylation motif JQX13_40815 PF02803 Thiolase, C-terminal domain JQX13_40815 PF00108 Thiolase, N-terminal domain JQX13_40820 PF01144 Coenzyme A transferase JQX13_40825 PF01144 Coenzyme A transferase JQX13_40830 PF01938 TRAM domain JQX13_40830 PF05958 tRNA (Uracil-5-)-methyltransferase JQX13_40835 PF01242 6-pyruvoyl tetrahydropterin synthase JQX13_40865 PF01938 TRAM domain JQX13_40865 PF00919 Uncharacterized protein family UPF0004 JQX13_40865 PF04055 Radical SAM superfamily JQX13_40870 PF00132 Bacterial transferase hexapeptide (six repeats) JQX13_40875 PF00027 Cyclic nucleotide-binding domain JQX13_40875 PF13545 Crp-like helix-turn-helix domain JQX13_40880 PF09335 SNARE associated Golgi protein JQX13_40885 PF00012 Hsp70 protein JQX13_40890 PF00571 CBS domain JQX13_40890 PF00478 IMP dehydrogenase / GMP reductase domain JQX13_40900 PF00958 GMP synthase C terminal domain JQX13_40900 PF00117 Glutamine amidotransferase class-I JQX13_40905 PF10459 Peptidase S46 JQX13_40915 PF00069 Protein kinase domain JQX13_40925 PF00293 NUDIX domain JQX13_40940 PF01926 50S ribosome-binding GTPase JQX13_40940 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JQX13_40945 PF07650 KH domain JQX13_40945 PF01926 50S ribosome-binding GTPase JQX13_40950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JQX13_40955 PF00035 Double-stranded RNA binding motif JQX13_40955 PF14622 Ribonuclease-III-like JQX13_40970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_40970 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_40970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_40975 PF01039 Carboxyl transferase domain JQX13_41010 PF08448 PAS fold JQX13_41010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_41010 PF08447 PAS fold JQX13_41025 PF00440 Bacterial regulatory proteins, tetR family JQX13_41025 PF08359 YsiA-like protein, C-terminal region JQX13_41035 PF00296 Luciferase-like monooxygenase JQX13_41045 PF00005 ABC transporter JQX13_41055 PF09308 LuxQ, periplasmic JQX13_41055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_41055 PF00072 Response regulator receiver domain JQX13_41055 PF00512 His Kinase A (phospho-acceptor) domain JQX13_41060 PF12697 Alpha/beta hydrolase family JQX13_41070 PF01979 Amidohydrolase family JQX13_41090 PF05193 Peptidase M16 inactive domain JQX13_41090 PF00675 Insulinase (Peptidase family M16) JQX13_41100 PF00722 Glycosyl hydrolases family 16 JQX13_41115 PF03435 Saccharopine dehydrogenase NADP binding domain JQX13_41120 PF00171 Aldehyde dehydrogenase family JQX13_41140 PF00378 Enoyl-CoA hydratase/isomerase JQX13_41165 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JQX13_41165 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JQX13_41170 PF00732 GMC oxidoreductase JQX13_41170 PF05199 GMC oxidoreductase JQX13_41180 PF01761 3-dehydroquinate synthase JQX13_41195 PF00107 Zinc-binding dehydrogenase JQX13_41195 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_41215 PF00989 PAS fold JQX13_41215 PF00512 His Kinase A (phospho-acceptor) domain JQX13_41215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_41215 PF00672 HAMP domain JQX13_41225 PF13823 Alcohol dehydrogenase GroES-associated JQX13_41225 PF00107 Zinc-binding dehydrogenase JQX13_41225 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_41250 PF12697 Alpha/beta hydrolase family JQX13_41275 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_41275 PF00069 Protein kinase domain JQX13_41285 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_41285 PF01610 Transposase JQX13_41285 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_41305 PF01156 Inosine-uridine preferring nucleoside hydrolase JQX13_41355 PF01476 LysM domain JQX13_41355 PF08239 Bacterial SH3 domain JQX13_41355 PF00877 NlpC/P60 family JQX13_41360 PF00682 HMGL-like JQX13_41365 PF02310 B12 binding domain JQX13_41375 PF02310 B12 binding domain JQX13_41375 PF01642 Methylmalonyl-CoA mutase JQX13_41380 PF00155 Aminotransferase class I and II JQX13_41395 PF00155 Aminotransferase class I and II JQX13_41415 PF01791 DeoC/LacD family aldolase JQX13_41420 PF00348 Polyprenyl synthetase JQX13_41440 PF01189 16S rRNA methyltransferase RsmB/F JQX13_41440 PF01029 NusB family JQX13_41445 PF00072 Response regulator receiver domain JQX13_41445 PF00486 Transcriptional regulatory protein, C terminal JQX13_41460 PF00990 Diguanylate cyclase, GGDEF domain JQX13_41460 PF00072 Response regulator receiver domain JQX13_41465 PF00072 Response regulator receiver domain JQX13_41465 PF00486 Transcriptional regulatory protein, C terminal JQX13_41470 PF00106 short chain dehydrogenase JQX13_41480 PF00326 Prolyl oligopeptidase family JQX13_41480 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JQX13_41515 PF13393 Histidyl-tRNA synthetase JQX13_41515 PF03129 Anticodon binding domain JQX13_41520 PF02666 Phosphatidylserine decarboxylase JQX13_41550 PF00005 ABC transporter JQX13_41555 PF02405 Permease MlaE JQX13_41575 PF17820 PDZ domain JQX13_41575 PF02163 Peptidase family M50 JQX13_41580 PF03150 Di-haem cytochrome c peroxidase JQX13_41595 PF08281 Sigma-70, region 4 JQX13_41595 PF04542 Sigma-70 region 2 JQX13_41615 PF00849 RNA pseudouridylate synthase JQX13_41625 PF00675 Insulinase (Peptidase family M16) JQX13_41625 PF05193 Peptidase M16 inactive domain JQX13_41630 PF00067 Cytochrome P450 JQX13_41640 PF00072 Response regulator receiver domain JQX13_41640 PF08448 PAS fold JQX13_41640 PF00512 His Kinase A (phospho-acceptor) domain JQX13_41640 PF13188 PAS domain JQX13_41640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_41655 PF13657 HipA N-terminal domain JQX13_41655 PF07804 HipA-like C-terminal domain JQX13_41660 PF03968 OstA-like protein JQX13_41660 PF04453 LPS transport system D JQX13_41665 PF01204 Trehalase JQX13_41680 PF00067 Cytochrome P450 JQX13_41685 PF00072 Response regulator receiver domain JQX13_41685 PF00196 Bacterial regulatory proteins, luxR family JQX13_41690 PF00069 Protein kinase domain JQX13_41700 PF00575 S1 RNA binding domain JQX13_41705 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_41705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_41705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_41715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_41715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_41715 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_41720 PF00378 Enoyl-CoA hydratase/isomerase JQX13_41725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JQX13_41725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JQX13_41740 PF01883 Iron-sulfur cluster assembly protein JQX13_41740 PF10609 NUBPL iron-transfer P-loop NTPase JQX13_41755 PF01343 Peptidase family S49 JQX13_41795 PF00005 ABC transporter JQX13_41800 PF00478 IMP dehydrogenase / GMP reductase domain JQX13_41800 PF00571 CBS domain JQX13_41805 PF00067 Cytochrome P450 JQX13_41810 PF07690 Major Facilitator Superfamily JQX13_41815 PF00501 AMP-binding enzyme JQX13_41815 PF00668 Condensation domain JQX13_41815 PF00550 Phosphopantetheine attachment site JQX13_41815 PF13193 AMP-binding enzyme C-terminal domain JQX13_41815 PF00975 Thioesterase domain JQX13_41820 PF06719 AraC-type transcriptional regulator N-terminus JQX13_41820 PF12833 Helix-turn-helix domain JQX13_41825 PF00106 short chain dehydrogenase JQX13_41835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_41835 PF03466 LysR substrate binding domain JQX13_41840 PF00730 HhH-GPD superfamily base excision DNA repair protein JQX13_41840 PF00633 Helix-hairpin-helix motif JQX13_41875 PF00512 His Kinase A (phospho-acceptor) domain JQX13_41875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_41880 PF00072 Response regulator receiver domain JQX13_41880 PF00486 Transcriptional regulatory protein, C terminal JQX13_41895 PF02861 Clp amino terminal domain, pathogenicity island component JQX13_41895 PF17871 AAA lid domain JQX13_41895 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_41895 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_41895 PF07724 AAA domain (Cdc48 subfamily) JQX13_41900 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_41900 PF17871 AAA lid domain JQX13_41900 PF07724 AAA domain (Cdc48 subfamily) JQX13_41900 PF02861 Clp amino terminal domain, pathogenicity island component JQX13_41900 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_41905 PF02861 Clp amino terminal domain, pathogenicity island component JQX13_41905 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_41905 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_41905 PF07724 AAA domain (Cdc48 subfamily) JQX13_41905 PF17871 AAA lid domain JQX13_41915 PF07238 PilZ domain JQX13_41915 PF00069 Protein kinase domain JQX13_41935 PF00069 Protein kinase domain JQX13_41935 PF07238 PilZ domain JQX13_41955 PF00535 Glycosyl transferase family 2 JQX13_41970 PF01137 RNA 3'-terminal phosphate cyclase JQX13_41970 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain JQX13_41985 PF00027 Cyclic nucleotide-binding domain JQX13_41985 PF07885 Ion channel JQX13_41995 PF01479 S4 domain JQX13_41995 PF00849 RNA pseudouridylate synthase JQX13_42000 PF04079 Segregation and condensation complex subunit ScpB JQX13_42005 PF02616 Segregation and condensation protein ScpA JQX13_42010 PF00579 tRNA synthetases class I (W and Y) JQX13_42020 PF03793 PASTA domain JQX13_42020 PF00069 Protein kinase domain JQX13_42040 PF00589 Phage integrase family JQX13_42040 PF02899 Phage integrase, N-terminal SAM-like domain JQX13_42045 PF01300 Telomere recombination JQX13_42075 PF08335 GlnD PII-uridylyltransferase JQX13_42075 PF01909 Nucleotidyltransferase domain JQX13_42075 PF01966 HD domain JQX13_42080 PF01520 N-acetylmuramoyl-L-alanine amidase JQX13_42090 PF00672 HAMP domain JQX13_42090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_42090 PF00512 His Kinase A (phospho-acceptor) domain JQX13_42090 PF13755 Sensor N-terminal transmembrane domain JQX13_42090 PF13756 Stimulus-sensing domain JQX13_42115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_42115 PF03466 LysR substrate binding domain JQX13_42130 PF00793 DAHP synthetase I family JQX13_42140 PF01891 Cobalt uptake substrate-specific transmembrane region JQX13_42155 PF00005 ABC transporter JQX13_42160 PF01903 CbiX JQX13_42175 PF01888 CbiD JQX13_42180 PF02570 Precorrin-8X methylmutase JQX13_42185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQX13_42190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQX13_42195 PF11761 Cobalamin biosynthesis central region JQX13_42195 PF01890 Cobalamin synthesis G C-terminus JQX13_42195 PF11760 Cobalamin synthesis G N-terminal JQX13_42200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JQX13_42200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQX13_42210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQX13_42215 PF10414 Sirohaem synthase dimerisation region JQX13_42215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQX13_42215 PF14824 Sirohaem biosynthesis protein central JQX13_42220 PF12557 Cob(I)alamin adenosyltransferase N terminal JQX13_42220 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JQX13_42225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JQX13_42225 PF07685 CobB/CobQ-like glutamine amidotransferase domain JQX13_42235 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JQX13_42240 PF03186 CobD/Cbib protein JQX13_42245 PF00155 Aminotransferase class I and II JQX13_42250 PF07685 CobB/CobQ-like glutamine amidotransferase domain JQX13_42250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JQX13_42255 PF02277 Phosphoribosyltransferase JQX13_42260 PF02654 Cobalamin-5-phosphate synthase JQX13_42270 PF07470 Glycosyl Hydrolase Family 88 JQX13_42275 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_42290 PF00593 TonB dependent receptor JQX13_42290 PF00593 TonB dependent receptor JQX13_42295 PF00107 Zinc-binding dehydrogenase JQX13_42295 PF13823 Alcohol dehydrogenase GroES-associated JQX13_42295 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_42310 PF00881 Nitroreductase family JQX13_42345 PF00005 ABC transporter JQX13_42370 PF09339 IclR helix-turn-helix domain JQX13_42390 PF01915 Glycosyl hydrolase family 3 C-terminal domain JQX13_42390 PF00933 Glycosyl hydrolase family 3 N terminal domain JQX13_42390 PF14310 Fibronectin type III-like domain JQX13_42400 PF00391 PEP-utilising enzyme, mobile domain JQX13_42400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JQX13_42400 PF02896 PEP-utilising enzyme, TIM barrel domain JQX13_42405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_42405 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_42405 PF18158 Adaptive response protein AidB N-terminal domain JQX13_42410 PF07683 Cobalamin synthesis protein cobW C-terminal domain JQX13_42410 PF02492 CobW/HypB/UreG, nucleotide-binding domain JQX13_42420 PF13386 Cytochrome C biogenesis protein transmembrane region JQX13_42430 PF01039 Carboxyl transferase domain JQX13_42440 PF01139 tRNA-splicing ligase RtcB JQX13_42460 PF08308 PEGA domain JQX13_42460 PF00069 Protein kinase domain JQX13_42475 PF01161 Phosphatidylethanolamine-binding protein JQX13_42480 PF01565 FAD binding domain JQX13_42480 PF08031 Berberine and berberine like JQX13_42515 PF00069 Protein kinase domain JQX13_42520 PF01610 Transposase JQX13_42520 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_42520 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_42630 PF02874 ATP synthase alpha/beta family, beta-barrel domain JQX13_42630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQX13_42635 PF00176 SNF2 family N-terminal domain JQX13_42635 PF00271 Helicase conserved C-terminal domain JQX13_42650 PF02796 Helix-turn-helix domain of resolvase JQX13_42650 PF00665 Integrase core domain JQX13_42655 PF01695 IstB-like ATP binding protein JQX13_42660 PF01624 MutS domain I JQX13_42660 PF00488 MutS domain V JQX13_42660 PF05188 MutS domain II JQX13_42660 PF05190 MutS family domain IV JQX13_42660 PF05192 MutS domain III JQX13_42665 PF06965 Na+/H+ antiporter 1 JQX13_42670 PF03109 ABC1 family JQX13_42680 PF00069 Protein kinase domain JQX13_42695 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_42700 PF13472 GDSL-like Lipase/Acylhydrolase family JQX13_42705 PF00005 ABC transporter JQX13_42755 PF00873 AcrB/AcrD/AcrF family JQX13_42760 PF13533 Biotin-lipoyl like JQX13_42775 PF00005 ABC transporter JQX13_42775 PF09383 NIL domain JQX13_42780 PF02405 Permease MlaE JQX13_42790 PF02405 Permease MlaE JQX13_42795 PF00005 ABC transporter JQX13_42795 PF08402 TOBE domain JQX13_42800 PF02470 MlaD protein JQX13_42830 PF00753 Metallo-beta-lactamase superfamily JQX13_42830 PF12706 Beta-lactamase superfamily domain JQX13_42835 PF00158 Sigma-54 interaction domain JQX13_42835 PF02954 Bacterial regulatory protein, Fis family JQX13_42835 PF01590 GAF domain JQX13_42870 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_42870 PF13665 Domain of unknown function (DUF4150) JQX13_42895 PF01695 IstB-like ATP binding protein JQX13_42900 PF02796 Helix-turn-helix domain of resolvase JQX13_42900 PF00665 Integrase core domain JQX13_42910 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JQX13_42910 PF01348 Type II intron maturase JQX13_42925 PF04389 Peptidase family M28 JQX13_42925 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_42930 PF00291 Pyridoxal-phosphate dependent enzyme JQX13_42940 PF03793 PASTA domain JQX13_42940 PF00069 Protein kinase domain JQX13_42945 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_42955 PF01142 tRNA pseudouridine synthase D (TruD) JQX13_42960 PF08281 Sigma-70, region 4 JQX13_42960 PF04542 Sigma-70 region 2 JQX13_42980 PF00106 short chain dehydrogenase JQX13_42995 PF01212 Beta-eliminating lyase JQX13_43010 PF13193 AMP-binding enzyme C-terminal domain JQX13_43010 PF00501 AMP-binding enzyme JQX13_43010 PF01553 Acyltransferase JQX13_43015 PF03372 Endonuclease/Exonuclease/phosphatase family JQX13_43020 PF00561 alpha/beta hydrolase fold JQX13_43025 PF00248 Aldo/keto reductase family JQX13_43035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_43035 PF00512 His Kinase A (phospho-acceptor) domain JQX13_43035 PF00072 Response regulator receiver domain JQX13_43035 PF13188 PAS domain JQX13_43035 PF08448 PAS fold JQX13_43045 PF00264 Common central domain of tyrosinase JQX13_43070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_43070 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_43070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_43075 PF12146 Serine aminopeptidase, S33 JQX13_43105 PF07733 Bacterial DNA polymerase III alpha NTPase domain JQX13_43105 PF02811 PHP domain JQX13_43105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JQX13_43105 PF14579 Helix-hairpin-helix motif JQX13_43130 PF00561 alpha/beta hydrolase fold JQX13_43140 PF01145 SPFH domain / Band 7 family JQX13_43150 PF12848 ABC transporter JQX13_43150 PF00005 ABC transporter JQX13_43155 PF05199 GMC oxidoreductase JQX13_43180 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_43180 PF00550 Phosphopantetheine attachment site JQX13_43180 PF14765 Polyketide synthase dehydratase JQX13_43180 PF08659 KR domain JQX13_43180 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_43180 PF00698 Acyl transferase domain JQX13_43180 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_43180 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_43190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_43190 PF03466 LysR substrate binding domain JQX13_43195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_43195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_43195 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_43200 PF00106 short chain dehydrogenase JQX13_43200 PF00561 alpha/beta hydrolase fold JQX13_43220 PF00462 Glutaredoxin JQX13_43225 PF01370 NAD dependent epimerase/dehydratase family JQX13_43235 PF03773 Predicted permease JQX13_43250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_43250 PF00072 Response regulator receiver domain JQX13_43250 PF00512 His Kinase A (phospho-acceptor) domain JQX13_43250 PF09308 LuxQ, periplasmic JQX13_43265 PF00154 recA bacterial DNA recombination protein JQX13_43275 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_43275 PF05362 Lon protease (S16) C-terminal proteolytic domain JQX13_43275 PF02190 ATP-dependent protease La (LON) substrate-binding domain JQX13_43285 PF00248 Aldo/keto reductase family JQX13_43300 PF04717 Type VI secretion system, phage-baseplate injector JQX13_43325 PF00069 Protein kinase domain JQX13_43325 PF03793 PASTA domain JQX13_43335 PF01590 GAF domain JQX13_43335 PF00158 Sigma-54 interaction domain JQX13_43360 PF02774 Semialdehyde dehydrogenase, dimerisation domain JQX13_43360 PF01118 Semialdehyde dehydrogenase, NAD binding domain JQX13_43365 PF01960 ArgJ family JQX13_43370 PF02863 Arginine repressor, C-terminal domain JQX13_43370 PF01316 Arginine repressor, DNA binding domain JQX13_43375 PF00206 Lyase JQX13_43375 PF14698 Argininosuccinate lyase C-terminal JQX13_43380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JQX13_43380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JQX13_43395 PF02678 Pirin JQX13_43395 PF05726 Pirin C-terminal cupin domain JQX13_43405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JQX13_43420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQX13_43420 PF02142 MGS-like domain JQX13_43420 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JQX13_43430 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JQX13_43430 PF01676 Metalloenzyme superfamily JQX13_43435 PF00155 Aminotransferase class I and II JQX13_43440 PF01467 Cytidylyltransferase-like JQX13_43455 PF16124 RecQ zinc-binding JQX13_43455 PF09382 RQC domain JQX13_43455 PF00271 Helicase conserved C-terminal domain JQX13_43455 PF00570 HRDC domain JQX13_43455 PF00270 DEAD/DEAH box helicase JQX13_43460 PF01545 Cation efflux family JQX13_43460 PF16916 Dimerisation domain of Zinc Transporter JQX13_43465 PF00158 Sigma-54 interaction domain JQX13_43465 PF01590 GAF domain JQX13_43465 PF02954 Bacterial regulatory protein, Fis family JQX13_43475 PF00679 Elongation factor G C-terminus JQX13_43475 PF14492 Elongation Factor G, domain II JQX13_43475 PF00009 Elongation factor Tu GTP binding domain JQX13_43475 PF03144 Elongation factor Tu domain 2 JQX13_43480 PF00149 Calcineurin-like phosphoesterase JQX13_43485 PF00850 Histone deacetylase domain JQX13_43490 PF01709 Transcriptional regulator JQX13_43495 PF01494 FAD binding domain JQX13_43500 PF01494 FAD binding domain JQX13_43510 PF01557 Fumarylacetoacetate (FAA) hydrolase family JQX13_43530 PF03466 LysR substrate binding domain JQX13_43530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_43570 PF00873 AcrB/AcrD/AcrF family JQX13_43575 PF01810 LysE type translocator JQX13_43580 PF00440 Bacterial regulatory proteins, tetR family JQX13_43580 PF13977 BetI-type transcriptional repressor, C-terminal JQX13_43585 PF03055 Retinal pigment epithelial membrane protein JQX13_43600 PF00069 Protein kinase domain JQX13_43600 PF03793 PASTA domain JQX13_43605 PF02954 Bacterial regulatory protein, Fis family JQX13_43605 PF00072 Response regulator receiver domain JQX13_43605 PF00158 Sigma-54 interaction domain JQX13_43655 PF00561 alpha/beta hydrolase fold JQX13_43660 PF00144 Beta-lactamase JQX13_43705 PF00297 Ribosomal protein L3 JQX13_43735 PF10145 Phage-related minor tail protein JQX13_43735 PF01551 Peptidase family M23 JQX13_43735 PF01464 Transglycosylase SLT domain JQX13_43745 PF07726 ATPase family associated with various cellular activities (AAA) JQX13_43745 PF17863 AAA lid domain JQX13_43760 PF04545 Sigma-70, region 4 JQX13_43760 PF04542 Sigma-70 region 2 JQX13_43760 PF00140 Sigma-70 factor, region 1.2 JQX13_43765 PF03169 OPT oligopeptide transporter protein JQX13_43775 PF01966 HD domain JQX13_43775 PF11871 Domain of unknown function (DUF3391) JQX13_43795 PF00893 Small Multidrug Resistance protein JQX13_43800 PF00849 RNA pseudouridylate synthase JQX13_43815 PF10609 NUBPL iron-transfer P-loop NTPase JQX13_43830 PF12390 Selenocysteine synthase N terminal JQX13_43830 PF03841 L-seryl-tRNA selenium transferase JQX13_43835 PF01464 Transglycosylase SLT domain JQX13_43840 PF00512 His Kinase A (phospho-acceptor) domain JQX13_43840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_43855 PF00795 Carbon-nitrogen hydrolase JQX13_43875 PF12848 ABC transporter JQX13_43875 PF00005 ABC transporter JQX13_43880 PF00069 Protein kinase domain JQX13_43890 PF02224 Cytidylate kinase JQX13_43895 PF00155 Aminotransferase class I and II JQX13_43900 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JQX13_43915 PF02374 Anion-transporting ATPase JQX13_43920 PF02954 Bacterial regulatory protein, Fis family JQX13_43920 PF00158 Sigma-54 interaction domain JQX13_43920 PF00072 Response regulator receiver domain JQX13_43945 PF00012 Hsp70 protein JQX13_43955 PF06689 ClpX C4-type zinc finger JQX13_43955 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_43955 PF07724 AAA domain (Cdc48 subfamily) JQX13_43970 PF01416 tRNA pseudouridine synthase JQX13_43985 PF02540 NAD synthase JQX13_43990 PF01747 ATP-sulfurylase JQX13_43990 PF14306 PUA-like domain JQX13_44000 PF02597 ThiS family JQX13_44010 PF05384 Sensor protein DegS JQX13_44010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_44010 PF07730 Histidine kinase JQX13_44015 PF00196 Bacterial regulatory proteins, luxR family JQX13_44015 PF00072 Response regulator receiver domain JQX13_44040 PF03576 Peptidase family S58 JQX13_44045 PF00440 Bacterial regulatory proteins, tetR family JQX13_44050 PF03055 Retinal pigment epithelial membrane protein JQX13_44095 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JQX13_44175 PF01820 D-ala D-ala ligase N-terminus JQX13_44175 PF07478 D-ala D-ala ligase C-terminus JQX13_44190 PF00490 Delta-aminolevulinic acid dehydratase JQX13_44200 PF00005 ABC transporter JQX13_44215 PF00440 Bacterial regulatory proteins, tetR family JQX13_44215 PF16925 Tetracyclin repressor-like, C-terminal domain JQX13_44220 PF01494 FAD binding domain JQX13_44235 PF12706 Beta-lactamase superfamily domain JQX13_44240 PF00106 short chain dehydrogenase JQX13_44245 PF05175 Methyltransferase small domain JQX13_44265 PF01739 CheR methyltransferase, SAM binding domain JQX13_44270 PF01339 CheB methylesterase JQX13_44275 PF01627 Hpt domain JQX13_44275 PF00072 Response regulator receiver domain JQX13_44275 PF01584 CheW-like domain JQX13_44275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_44280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_44290 PF01584 CheW-like domain JQX13_44305 PF01425 Amidase JQX13_44310 PF06463 Molybdenum Cofactor Synthesis C JQX13_44310 PF04055 Radical SAM superfamily JQX13_44315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JQX13_44315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JQX13_44320 PF04542 Sigma-70 region 2 JQX13_44320 PF08281 Sigma-70, region 4 JQX13_44340 PF03309 Type III pantothenate kinase JQX13_44345 PF08279 HTH domain JQX13_44345 PF03099 Biotin/lipoate A/B protein ligase family JQX13_44345 PF02237 Biotin protein ligase C terminal domain JQX13_44350 PF03447 Homoserine dehydrogenase, NAD binding domain JQX13_44350 PF00742 Homoserine dehydrogenase JQX13_44350 PF01842 ACT domain JQX13_44380 PF00561 alpha/beta hydrolase fold JQX13_44385 PF00485 Phosphoribulokinase / Uridine kinase family JQX13_44415 PF01835 MG2 domain JQX13_44415 PF07703 Alpha-2-macroglobulin bait region domain JQX13_44415 PF00207 Alpha-2-macroglobulin family JQX13_44435 PF04116 Fatty acid hydroxylase superfamily JQX13_44455 PF00912 Transglycosylase JQX13_44470 PF00437 Type II/IV secretion system protein JQX13_44485 PF01625 Peptide methionine sulfoxide reductase JQX13_44490 PF02687 FtsX-like permease family JQX13_44490 PF12704 MacB-like periplasmic core domain JQX13_44490 PF00005 ABC transporter JQX13_44495 PF02687 FtsX-like permease family JQX13_44495 PF12704 MacB-like periplasmic core domain JQX13_44500 PF00005 ABC transporter JQX13_44500 PF02687 FtsX-like permease family JQX13_44500 PF12704 MacB-like periplasmic core domain JQX13_44520 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_44520 PF02861 Clp amino terminal domain, pathogenicity island component JQX13_44520 PF17871 AAA lid domain JQX13_44520 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_44520 PF07724 AAA domain (Cdc48 subfamily) JQX13_44565 PF00497 Bacterial extracellular solute-binding proteins, family 3 JQX13_44565 PF00512 His Kinase A (phospho-acceptor) domain JQX13_44565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_44585 PF08448 PAS fold JQX13_44585 PF00072 Response regulator receiver domain JQX13_44585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_44585 PF00512 His Kinase A (phospho-acceptor) domain JQX13_44585 PF13188 PAS domain JQX13_44610 PF00149 Calcineurin-like phosphoesterase JQX13_44610 PF02872 5'-nucleotidase, C-terminal domain JQX13_44615 PF08447 PAS fold JQX13_44615 PF08448 PAS fold JQX13_44615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_44625 PF00561 alpha/beta hydrolase fold JQX13_44630 PF00561 alpha/beta hydrolase fold JQX13_44635 PF00689 Cation transporting ATPase, C-terminus JQX13_44635 PF00690 Cation transporter/ATPase, N-terminus JQX13_44640 PF14760 Rnk N-terminus JQX13_44640 PF01272 Transcription elongation factor, GreA/GreB, C-term JQX13_44645 PF01467 Cytidylyltransferase-like JQX13_44655 PF07075 Protein of unknown function (DUF1343) JQX13_44660 PF00069 Protein kinase domain JQX13_44660 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_44670 PF01713 Smr domain JQX13_44670 PF00488 MutS domain V JQX13_44675 PF00773 RNB domain JQX13_44675 PF08206 Ribonuclease B OB domain JQX13_44675 PF08461 Ribonuclease R winged-helix domain JQX13_44675 PF17876 Cold shock domain JQX13_44675 PF00575 S1 RNA binding domain JQX13_44685 PF03453 MoeA N-terminal region (domain I and II) JQX13_44685 PF03454 MoeA C-terminal region (domain IV) JQX13_44685 PF00994 Probable molybdopterin binding domain JQX13_44690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JQX13_44690 PF00925 GTP cyclohydrolase II JQX13_44700 PF03099 Biotin/lipoate A/B protein ligase family JQX13_44700 PF00293 NUDIX domain JQX13_44710 PF00364 Biotin-requiring enzyme JQX13_44710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JQX13_44710 PF02817 e3 binding domain JQX13_44715 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JQX13_44715 PF04055 Radical SAM superfamily JQX13_44725 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_44725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQX13_44740 PF17876 Cold shock domain JQX13_44740 PF08206 Ribonuclease B OB domain JQX13_44740 PF00773 RNB domain JQX13_44740 PF00575 S1 RNA binding domain JQX13_44750 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JQX13_44750 PF01502 Phosphoribosyl-AMP cyclohydrolase JQX13_44755 PF00459 Inositol monophosphatase family JQX13_44760 PF00977 Histidine biosynthesis protein JQX13_44765 PF00475 Imidazoleglycerol-phosphate dehydratase JQX13_44770 PF00977 Histidine biosynthesis protein JQX13_44775 PF00117 Glutamine amidotransferase class-I JQX13_44780 PF00155 Aminotransferase class I and II JQX13_44785 PF00815 Histidinol dehydrogenase JQX13_44790 PF08029 HisG, C-terminal domain JQX13_44790 PF01634 ATP phosphoribosyltransferase JQX13_44795 PF00072 Response regulator receiver domain JQX13_44800 PF06463 Molybdenum Cofactor Synthesis C JQX13_44800 PF04055 Radical SAM superfamily JQX13_44810 PF13667 ThiC-associated domain JQX13_44810 PF01964 Radical SAM ThiC family JQX13_44815 PF00478 IMP dehydrogenase / GMP reductase domain JQX13_44815 PF00571 CBS domain JQX13_44830 PF00072 Response regulator receiver domain JQX13_44830 PF00158 Sigma-54 interaction domain JQX13_44830 PF02954 Bacterial regulatory protein, Fis family JQX13_44835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_44835 PF00512 His Kinase A (phospho-acceptor) domain JQX13_44840 PF00072 Response regulator receiver domain JQX13_44845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_44875 PF07885 Ion channel JQX13_44875 PF00027 Cyclic nucleotide-binding domain JQX13_44885 PF00753 Metallo-beta-lactamase superfamily JQX13_44905 PF00005 ABC transporter JQX13_44910 PF10502 Signal peptidase, peptidase S26 JQX13_44945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_44945 PF03466 LysR substrate binding domain JQX13_44970 PF13195 Protein of unknown function (DUF4011) JQX13_44970 PF13086 AAA domain JQX13_44970 PF13087 AAA domain JQX13_44970 PF13195 Protein of unknown function (DUF4011) JQX13_44970 PF13087 AAA domain JQX13_44970 PF13086 AAA domain JQX13_44980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_44980 PF03466 LysR substrate binding domain JQX13_44990 PF01270 Glycosyl hydrolases family 8 JQX13_45015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_45015 PF08447 PAS fold JQX13_45015 PF08448 PAS fold JQX13_45025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JQX13_45025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JQX13_45025 PF00034 Cytochrome c JQX13_45035 PF00391 PEP-utilising enzyme, mobile domain JQX13_45035 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JQX13_45045 PF00069 Protein kinase domain JQX13_45045 PF08308 PEGA domain JQX13_45050 PF00072 Response regulator receiver domain JQX13_45050 PF00158 Sigma-54 interaction domain JQX13_45055 PF00069 Protein kinase domain JQX13_45075 PF04542 Sigma-70 region 2 JQX13_45075 PF08281 Sigma-70, region 4 JQX13_45100 PF00067 Cytochrome P450 JQX13_45110 PF03466 LysR substrate binding domain JQX13_45110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_45165 PF13665 Domain of unknown function (DUF4150) JQX13_45165 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_45225 PF13665 Domain of unknown function (DUF4150) JQX13_45225 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_45280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JQX13_45280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JQX13_45295 PF13180 PDZ domain JQX13_45300 PF01025 GrpE JQX13_45310 PF17862 AAA+ lid domain JQX13_45310 PF06480 FtsH Extracellular JQX13_45310 PF01434 Peptidase family M41 JQX13_45310 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_45320 PF00293 NUDIX domain JQX13_45325 PF00069 Protein kinase domain JQX13_45325 PF03793 PASTA domain JQX13_45335 PF03918 Cytochrome C biogenesis protein JQX13_45360 PF00376 MerR family regulatory protein JQX13_45360 PF09278 MerR, DNA binding JQX13_45365 PF00561 alpha/beta hydrolase fold JQX13_45370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JQX13_45370 PF00364 Biotin-requiring enzyme JQX13_45370 PF02817 e3 binding domain JQX13_45385 PF08713 DNA alkylation repair enzyme JQX13_45395 PF00440 Bacterial regulatory proteins, tetR family JQX13_45395 PF08361 MAATS-type transcriptional repressor, C-terminal region JQX13_45425 PF17871 AAA lid domain JQX13_45425 PF07724 AAA domain (Cdc48 subfamily) JQX13_45425 PF02861 Clp amino terminal domain, pathogenicity island component JQX13_45425 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_45425 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_45440 PF00248 Aldo/keto reductase family JQX13_45470 PF00849 RNA pseudouridylate synthase JQX13_45480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JQX13_45490 PF01494 FAD binding domain JQX13_45495 PF01933 Uncharacterised protein family UPF0052 JQX13_45500 PF02397 Bacterial sugar transferase JQX13_45505 PF13614 AAA domain JQX13_45540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JQX13_45540 PF00128 Alpha amylase, catalytic domain JQX13_45540 PF11941 Domain of unknown function (DUF3459) JQX13_45550 PF00753 Metallo-beta-lactamase superfamily JQX13_45555 PF07470 Glycosyl Hydrolase Family 88 JQX13_45560 PF02581 Thiamine monophosphate synthase JQX13_45565 PF02110 Hydroxyethylthiazole kinase family JQX13_45570 PF08308 PEGA domain JQX13_45570 PF00069 Protein kinase domain JQX13_45575 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JQX13_45575 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JQX13_45585 PF04545 Sigma-70, region 4 JQX13_45585 PF04539 Sigma-70 region 3 JQX13_45585 PF04542 Sigma-70 region 2 JQX13_45585 PF00140 Sigma-70 factor, region 1.2 JQX13_45595 PF00313 'Cold-shock' DNA-binding domain JQX13_45600 PF01425 Amidase JQX13_45630 PF08281 Sigma-70, region 4 JQX13_45630 PF04542 Sigma-70 region 2 JQX13_45660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_45660 PF00512 His Kinase A (phospho-acceptor) domain JQX13_45660 PF00989 PAS fold JQX13_45665 PF00270 DEAD/DEAH box helicase JQX13_45665 PF00271 Helicase conserved C-terminal domain JQX13_45665 PF03880 DbpA RNA binding domain JQX13_45670 PF00069 Protein kinase domain JQX13_45670 PF03793 PASTA domain JQX13_45690 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JQX13_45720 PF00223 Photosystem I psaA/psaB protein JQX13_45720 PF00691 OmpA family JQX13_45735 PF00196 Bacterial regulatory proteins, luxR family JQX13_45735 PF00072 Response regulator receiver domain JQX13_45740 PF07730 Histidine kinase JQX13_45740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_45745 PF13193 AMP-binding enzyme C-terminal domain JQX13_45745 PF00550 Phosphopantetheine attachment site JQX13_45745 PF00668 Condensation domain JQX13_45745 PF00501 AMP-binding enzyme JQX13_45755 PF00072 Response regulator receiver domain JQX13_45755 PF02954 Bacterial regulatory protein, Fis family JQX13_45755 PF00158 Sigma-54 interaction domain JQX13_45760 PF00990 Diguanylate cyclase, GGDEF domain JQX13_45760 PF07694 5TMR of 5TMR-LYT JQX13_45775 PF00905 Penicillin binding protein transpeptidase domain JQX13_45785 PF00005 ABC transporter JQX13_45790 PF13462 Thioredoxin JQX13_45790 PF06965 Na+/H+ antiporter 1 JQX13_45795 PF01042 Endoribonuclease L-PSP JQX13_45800 PF13291 ACT domain JQX13_45800 PF04607 Region found in RelA / SpoT proteins JQX13_45800 PF02824 TGS domain JQX13_45810 PF00069 Protein kinase domain JQX13_45820 PF01258 Prokaryotic dksA/traR C4-type zinc finger JQX13_45830 PF03061 Thioesterase superfamily JQX13_45835 PF00465 Iron-containing alcohol dehydrogenase JQX13_45855 PF00012 Hsp70 protein JQX13_45870 PF04359 Protein of unknown function (DUF493) JQX13_45875 PF13638 PIN domain JQX13_45875 PF02562 PhoH-like protein JQX13_45880 PF01272 Transcription elongation factor, GreA/GreB, C-term JQX13_45880 PF03449 Transcription elongation factor, N-terminal JQX13_45900 PF03466 LysR substrate binding domain JQX13_45900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_45905 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_45905 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_45905 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_45905 PF00550 Phosphopantetheine attachment site JQX13_45905 PF08659 KR domain JQX13_45905 PF14765 Polyketide synthase dehydratase JQX13_45905 PF00107 Zinc-binding dehydrogenase JQX13_45905 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_45905 PF00698 Acyl transferase domain JQX13_45925 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JQX13_45940 PF00106 short chain dehydrogenase JQX13_45950 PF16363 GDP-mannose 4,6 dehydratase JQX13_45985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JQX13_45990 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_45990 PF01799 [2Fe-2S] binding domain JQX13_45995 PF01047 MarR family JQX13_46000 PF07690 Major Facilitator Superfamily JQX13_46005 PF00561 alpha/beta hydrolase fold JQX13_46065 PF00239 Resolvase, N terminal domain JQX13_46065 PF02796 Helix-turn-helix domain of resolvase JQX13_46085 PF13302 Acetyltransferase (GNAT) domain JQX13_46095 PF13665 Domain of unknown function (DUF4150) JQX13_46095 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JQX13_46120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQX13_46185 PF04408 Helicase associated domain (HA2) JQX13_46185 PF11898 Domain of unknown function (DUF3418) JQX13_46185 PF00270 DEAD/DEAH box helicase JQX13_46185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JQX13_46185 PF00271 Helicase conserved C-terminal domain JQX13_46205 PF02796 Helix-turn-helix domain of resolvase JQX13_46205 PF00665 Integrase core domain JQX13_46220 PF00440 Bacterial regulatory proteins, tetR family JQX13_46220 PF16859 Tetracyclin repressor-like, C-terminal domain JQX13_46230 PF00106 short chain dehydrogenase JQX13_46245 PF00293 NUDIX domain JQX13_46270 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_46270 PF00107 Zinc-binding dehydrogenase JQX13_46275 PF12833 Helix-turn-helix domain JQX13_46275 PF12852 Cupin JQX13_46290 PF00571 CBS domain JQX13_46290 PF00005 ABC transporter JQX13_46295 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_46300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JQX13_46305 PF01636 Phosphotransferase enzyme family JQX13_46310 PF13411 MerR HTH family regulatory protein JQX13_46315 PF01209 ubiE/COQ5 methyltransferase family JQX13_46330 PF00144 Beta-lactamase JQX13_46355 PF09334 tRNA synthetases class I (M) JQX13_46355 PF08264 Anticodon-binding domain of tRNA JQX13_46355 PF00133 tRNA synthetases class I (I, L, M and V) JQX13_46355 PF13603 Leucyl-tRNA synthetase, Domain 2 JQX13_46380 PF01575 MaoC like domain JQX13_46385 PF00117 Glutamine amidotransferase class-I JQX13_46420 PF00069 Protein kinase domain JQX13_46425 PF01522 Polysaccharide deacetylase JQX13_46425 PF00457 Glycosyl hydrolases family 11 JQX13_46440 PF00155 Aminotransferase class I and II JQX13_46450 PF00512 His Kinase A (phospho-acceptor) domain JQX13_46450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_46455 PF00248 Aldo/keto reductase family JQX13_46460 PF04349 Periplasmic glucan biosynthesis protein, MdoG JQX13_46470 PF00535 Glycosyl transferase family 2 JQX13_46475 PF03169 OPT oligopeptide transporter protein JQX13_46480 PF00069 Protein kinase domain JQX13_46480 PF07238 PilZ domain JQX13_46535 PF03065 Glycosyl hydrolase family 57 JQX13_46535 PF09210 Domain of unknown function (DUF1957) JQX13_46540 PF00664 ABC transporter transmembrane region JQX13_46540 PF00005 ABC transporter JQX13_46540 PF03412 Peptidase C39 family JQX13_46560 PF03928 Haem-degrading JQX13_46565 PF07519 Tannase and feruloyl esterase JQX13_46590 PF00248 Aldo/keto reductase family JQX13_46600 PF00484 Carbonic anhydrase JQX13_46605 PF01740 STAS domain JQX13_46605 PF00916 Sulfate permease family JQX13_46610 PF00158 Sigma-54 interaction domain JQX13_46610 PF00072 Response regulator receiver domain JQX13_46610 PF02954 Bacterial regulatory protein, Fis family JQX13_46615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_46615 PF00672 HAMP domain JQX13_46615 PF00512 His Kinase A (phospho-acceptor) domain JQX13_46615 PF16750 Sensor domain of 2-component histidine kinase JQX13_46620 PF03442 Carbohydrate binding domain X2 JQX13_46620 PF00942 Cellulose binding domain JQX13_46625 PF03211 Pectate lyase JQX13_46630 PF00356 Bacterial regulatory proteins, lacI family JQX13_46630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JQX13_46635 PF00232 Glycosyl hydrolase family 1 JQX13_46640 PF01547 Bacterial extracellular solute-binding protein JQX13_46645 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_46650 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_46655 PF00005 ABC transporter JQX13_46655 PF17912 MalK OB fold domain JQX13_46660 PF00041 Fibronectin type III domain JQX13_46660 PF02011 Glycosyl hydrolase family 48 JQX13_46660 PF00553 Cellulose binding domain JQX13_46665 PF02011 Glycosyl hydrolase family 48 JQX13_46665 PF00942 Cellulose binding domain JQX13_46665 PF00759 Glycosyl hydrolase family 9 JQX13_46670 PF00553 Cellulose binding domain JQX13_46670 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JQX13_46675 PF02264 LamB porin JQX13_46680 PF00561 alpha/beta hydrolase fold JQX13_46685 PF00199 Catalase JQX13_46685 PF06628 Catalase-related immune-responsive JQX13_46690 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_46690 PF03413 Peptidase propeptide and YPEB domain JQX13_46690 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_46690 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_46690 PF04151 Bacterial pre-peptidase C-terminal domain JQX13_46715 PF01177 Asp/Glu/Hydantoin racemase JQX13_46720 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JQX13_46720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JQX13_46725 PF00667 FAD binding domain JQX13_46725 PF00258 Flavodoxin JQX13_46725 PF00175 Oxidoreductase NAD-binding domain JQX13_46730 PF00009 Elongation factor Tu GTP binding domain JQX13_46735 PF01507 Phosphoadenosine phosphosulfate reductase family JQX13_46740 PF10414 Sirohaem synthase dimerisation region JQX13_46740 PF14824 Sirohaem biosynthesis protein central JQX13_46740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQX13_46745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQX13_46745 PF14824 Sirohaem biosynthesis protein central JQX13_46745 PF10414 Sirohaem synthase dimerisation region JQX13_46755 PF01507 Phosphoadenosine phosphosulfate reductase family JQX13_46760 PF03473 MOSC domain JQX13_46760 PF03476 MOSC N-terminal beta barrel domain JQX13_46760 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_46770 PF01432 Peptidase family M3 JQX13_46780 PF00069 Protein kinase domain JQX13_46780 PF03793 PASTA domain JQX13_46865 PF00675 Insulinase (Peptidase family M16) JQX13_46865 PF05193 Peptidase M16 inactive domain JQX13_46870 PF08042 PqqA family JQX13_46875 PF12706 Beta-lactamase superfamily domain JQX13_46880 PF03070 TENA/THI-4/PQQC family JQX13_46885 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JQX13_46890 PF13186 Iron-sulfur cluster-binding domain JQX13_46890 PF04055 Radical SAM superfamily JQX13_46900 PF00440 Bacterial regulatory proteins, tetR family JQX13_46950 PF01695 IstB-like ATP binding protein JQX13_47035 PF02954 Bacterial regulatory protein, Fis family JQX13_47035 PF00072 Response regulator receiver domain JQX13_47035 PF00158 Sigma-54 interaction domain JQX13_47040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_47040 PF00512 His Kinase A (phospho-acceptor) domain JQX13_47045 PF00005 ABC transporter JQX13_47045 PF02687 FtsX-like permease family JQX13_47045 PF12704 MacB-like periplasmic core domain JQX13_47050 PF12704 MacB-like periplasmic core domain JQX13_47050 PF00005 ABC transporter JQX13_47050 PF02687 FtsX-like permease family JQX13_47065 PF00005 ABC transporter JQX13_47065 PF02687 FtsX-like permease family JQX13_47065 PF12704 MacB-like periplasmic core domain JQX13_47070 PF04616 Glycosyl hydrolases family 43 JQX13_47085 PF00248 Aldo/keto reductase family JQX13_47090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_47090 PF03466 LysR substrate binding domain JQX13_47095 PF07995 Glucose / Sorbosone dehydrogenase JQX13_47125 PF02371 Transposase IS116/IS110/IS902 family JQX13_47125 PF01548 Transposase JQX13_47135 PF00440 Bacterial regulatory proteins, tetR family JQX13_47140 PF00106 short chain dehydrogenase JQX13_47155 PF03466 LysR substrate binding domain JQX13_47155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_47165 PF12146 Serine aminopeptidase, S33 JQX13_47170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_47170 PF03466 LysR substrate binding domain JQX13_47200 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_47200 PF01799 [2Fe-2S] binding domain JQX13_47205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JQX13_47210 PF13004 Putative binding domain, N-terminal JQX13_47210 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_47215 PF13649 Methyltransferase domain JQX13_47220 PF00067 Cytochrome P450 JQX13_47235 PF01614 Bacterial transcriptional regulator JQX13_47235 PF09339 IclR helix-turn-helix domain JQX13_47240 PF07883 Cupin domain JQX13_47245 PF00512 His Kinase A (phospho-acceptor) domain JQX13_47245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_47250 PF00486 Transcriptional regulatory protein, C terminal JQX13_47250 PF00072 Response regulator receiver domain JQX13_47270 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_47275 PF00005 ABC transporter JQX13_47275 PF03459 TOBE domain JQX13_47290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JQX13_47300 PF03412 Peptidase C39 family JQX13_47300 PF00664 ABC transporter transmembrane region JQX13_47300 PF00005 ABC transporter JQX13_47310 PF00196 Bacterial regulatory proteins, luxR family JQX13_47310 PF00072 Response regulator receiver domain JQX13_47315 PF00011 Hsp20/alpha crystallin family JQX13_47335 PF00795 Carbon-nitrogen hydrolase JQX13_47345 PF00684 DnaJ central domain JQX13_47345 PF01556 DnaJ C terminal domain JQX13_47345 PF00226 DnaJ domain JQX13_47350 PF03807 NADP oxidoreductase coenzyme F420-dependent JQX13_47350 PF14748 Pyrroline-5-carboxylate reductase dimerisation JQX13_47360 PF02594 Uncharacterised ACR, YggU family COG1872 JQX13_47375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JQX13_47375 PF01612 3'-5' exonuclease JQX13_47375 PF00476 DNA polymerase family A JQX13_47375 PF01367 5'-3' exonuclease, C-terminal SAM fold JQX13_47385 PF00437 Type II/IV secretion system protein JQX13_47390 PF00263 Bacterial type II and III secretion system protein JQX13_47390 PF03958 Bacterial type II/III secretion system short domain JQX13_47400 PF16697 Inner membrane component of T3SS, cytoplasmic domain JQX13_47415 PF05746 DALR anticodon binding domain JQX13_47415 PF02092 Glycyl-tRNA synthetase beta subunit JQX13_47420 PF02091 Glycyl-tRNA synthetase alpha subunit JQX13_47425 PF00294 pfkB family carbohydrate kinase JQX13_47430 PF02565 Recombination protein O C terminal JQX13_47430 PF11967 Recombination protein O N terminal JQX13_47465 PF04983 RNA polymerase Rpb1, domain 3 JQX13_47465 PF00623 RNA polymerase Rpb1, domain 2 JQX13_47465 PF04998 RNA polymerase Rpb1, domain 5 JQX13_47465 PF04997 RNA polymerase Rpb1, domain 1 JQX13_47465 PF05000 RNA polymerase Rpb1, domain 4 JQX13_47470 PF04560 RNA polymerase Rpb2, domain 7 JQX13_47470 PF04563 RNA polymerase beta subunit JQX13_47470 PF00562 RNA polymerase Rpb2, domain 6 JQX13_47470 PF04565 RNA polymerase Rpb2, domain 3 JQX13_47470 PF10385 RNA polymerase beta subunit external 1 domain JQX13_47470 PF04561 RNA polymerase Rpb2, domain 2 JQX13_47475 PF16320 Ribosomal protein L7/L12 dimerisation domain JQX13_47475 PF00542 Ribosomal protein L7/L12 C-terminal domain JQX13_47480 PF00466 Ribosomal protein L10 JQX13_47485 PF00687 Ribosomal protein L1p/L10e family JQX13_47490 PF03946 Ribosomal protein L11, N-terminal domain JQX13_47490 PF00298 Ribosomal protein L11, RNA binding domain JQX13_47495 PF02357 Transcription termination factor nusG JQX13_47495 PF00467 KOW motif JQX13_47510 PF00471 Ribosomal protein L33 JQX13_47515 PF03143 Elongation factor Tu C-terminal domain JQX13_47515 PF03144 Elongation factor Tu domain 2 JQX13_47515 PF00009 Elongation factor Tu GTP binding domain JQX13_47540 PF00588 SpoU rRNA Methylase family JQX13_47540 PF08032 RNA 2'-O ribose methyltransferase substrate binding JQX13_47550 PF18030 RimK PreATP-grasp domain JQX13_47550 PF08443 RimK-like ATP-grasp domain JQX13_47580 PF00271 Helicase conserved C-terminal domain JQX13_47580 PF00270 DEAD/DEAH box helicase JQX13_47580 PF04408 Helicase associated domain (HA2) JQX13_47580 PF08482 ATP-dependent helicase C-terminal JQX13_47605 PF11953 Domain of unknown function (DUF3470) JQX13_47605 PF00037 4Fe-4S binding domain JQX13_47610 PF01118 Semialdehyde dehydrogenase, NAD binding domain JQX13_47610 PF02774 Semialdehyde dehydrogenase, dimerisation domain JQX13_47620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_47620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_47620 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_47630 PF04389 Peptidase family M28 JQX13_47630 PF02225 PA domain JQX13_47645 PF02769 AIR synthase related protein, C-terminal domain JQX13_47645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JQX13_47645 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JQX13_47660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JQX13_47660 PF00384 Molybdopterin oxidoreductase JQX13_47660 PF01568 Molydopterin dinucleotide binding domain JQX13_47685 PF01545 Cation efflux family JQX13_47685 PF16916 Dimerisation domain of Zinc Transporter JQX13_47700 PF01594 AI-2E family transporter JQX13_47720 PF00067 Cytochrome P450 JQX13_47745 PF13411 MerR HTH family regulatory protein JQX13_47755 PF01425 Amidase JQX13_47760 PF02013 Cellulose or protein binding domain JQX13_47760 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_47770 PF00561 alpha/beta hydrolase fold JQX13_47775 PF02347 Glycine cleavage system P-protein JQX13_47780 PF01597 Glycine cleavage H-protein JQX13_47785 PF08669 Glycine cleavage T-protein C-terminal barrel domain JQX13_47785 PF01571 Aminomethyltransferase folate-binding domain JQX13_47790 PF02219 Methylenetetrahydrofolate reductase JQX13_47800 PF00561 alpha/beta hydrolase fold JQX13_47810 PF07715 TonB-dependent Receptor Plug Domain JQX13_47810 PF00593 TonB dependent receptor JQX13_47825 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JQX13_47825 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JQX13_47830 PF05099 Tellurite resistance protein TerB JQX13_47830 PF00226 DnaJ domain JQX13_47835 PF00672 HAMP domain JQX13_47835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_47835 PF00512 His Kinase A (phospho-acceptor) domain JQX13_47835 PF01627 Hpt domain JQX13_47835 PF00072 Response regulator receiver domain JQX13_47835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JQX13_47845 PF01713 Smr domain JQX13_47850 PF00962 Adenosine/AMP deaminase JQX13_47855 PF01180 Dihydroorotate dehydrogenase JQX13_47865 PF00534 Glycosyl transferases group 1 JQX13_47865 PF13439 Glycosyltransferase Family 4 JQX13_47880 PF01926 50S ribosome-binding GTPase JQX13_47895 PF01121 Dephospho-CoA kinase JQX13_47915 PF00202 Aminotransferase class-III JQX13_47920 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_47920 PF07724 AAA domain (Cdc48 subfamily) JQX13_47925 PF00227 Proteasome subunit JQX13_47930 PF00106 short chain dehydrogenase JQX13_47935 PF02954 Bacterial regulatory protein, Fis family JQX13_47935 PF00072 Response regulator receiver domain JQX13_47935 PF00158 Sigma-54 interaction domain JQX13_47940 PF07504 Fungalysin/Thermolysin Propeptide Motif JQX13_47940 PF03413 Peptidase propeptide and YPEB domain JQX13_47940 PF01447 Thermolysin metallopeptidase, catalytic domain JQX13_47940 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQX13_47945 PF00722 Glycosyl hydrolases family 16 JQX13_47965 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JQX13_47965 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JQX13_47970 PF03450 CO dehydrogenase flavoprotein C-terminal domain JQX13_47970 PF00941 FAD binding domain in molybdopterin dehydrogenase JQX13_47975 PF10518 TAT (twin-arginine translocation) pathway signal sequence JQX13_47975 PF01799 [2Fe-2S] binding domain JQX13_47975 PF00111 2Fe-2S iron-sulfur cluster binding domain JQX13_47980 PF00561 alpha/beta hydrolase fold JQX13_47980 PF00364 Biotin-requiring enzyme JQX13_48000 PF00589 Phage integrase family JQX13_48000 PF02899 Phage integrase, N-terminal SAM-like domain JQX13_48010 PF01134 Glucose inhibited division protein A JQX13_48035 PF01131 DNA topoisomerase JQX13_48035 PF01396 Topoisomerase DNA binding C4 zinc finger JQX13_48035 PF01751 Toprim domain JQX13_48055 PF02578 Multi-copper polyphenol oxidoreductase laccase JQX13_48060 PF00990 Diguanylate cyclase, GGDEF domain JQX13_48065 PF13180 PDZ domain JQX13_48070 PF09210 Domain of unknown function (DUF1957) JQX13_48070 PF03065 Glycosyl hydrolase family 57 JQX13_48085 PF00072 Response regulator receiver domain JQX13_48095 PF05362 Lon protease (S16) C-terminal proteolytic domain JQX13_48095 PF02190 ATP-dependent protease La (LON) substrate-binding domain JQX13_48095 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_48100 PF08335 GlnD PII-uridylyltransferase JQX13_48100 PF03710 Glutamate-ammonia ligase adenylyltransferase JQX13_48110 PF01063 Amino-transferase class IV JQX13_48115 PF16193 AAA C-terminal domain JQX13_48115 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_48115 PF12002 MgsA AAA+ ATPase C terminal JQX13_48125 PF01261 Xylose isomerase-like TIM barrel JQX13_48130 PF02833 DHHA2 domain JQX13_48130 PF01368 DHH family JQX13_48135 PF00266 Aminotransferase class-V JQX13_48145 PF00069 Protein kinase domain JQX13_48160 PF13277 YmdB-like protein JQX13_48165 PF01479 S4 domain JQX13_48165 PF00579 tRNA synthetases class I (W and Y) JQX13_48180 PF02586 SOS response associated peptidase (SRAP) JQX13_48185 PF01728 FtsJ-like methyltransferase JQX13_48200 PF00512 His Kinase A (phospho-acceptor) domain JQX13_48200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_48205 PF00512 His Kinase A (phospho-acceptor) domain JQX13_48205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_48215 PF02770 Acyl-CoA dehydrogenase, middle domain JQX13_48215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JQX13_48215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQX13_48235 PF00072 Response regulator receiver domain JQX13_48235 PF00512 His Kinase A (phospho-acceptor) domain JQX13_48235 PF08448 PAS fold JQX13_48235 PF13188 PAS domain JQX13_48235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_48250 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_48250 PF00550 Phosphopantetheine attachment site JQX13_48250 PF08659 KR domain JQX13_48250 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_48250 PF00550 Phosphopantetheine attachment site JQX13_48250 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_48250 PF14765 Polyketide synthase dehydratase JQX13_48250 PF08659 KR domain JQX13_48250 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_48250 PF14765 Polyketide synthase dehydratase JQX13_48250 PF00698 Acyl transferase domain JQX13_48250 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_48250 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_48250 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_48250 PF00698 Acyl transferase domain JQX13_48250 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_48255 PF00698 Acyl transferase domain JQX13_48255 PF08990 Erythronolide synthase docking JQX13_48255 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_48255 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_48255 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_48255 PF00550 Phosphopantetheine attachment site JQX13_48255 PF00975 Thioesterase domain JQX13_48255 PF08659 KR domain JQX13_48260 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_48260 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_48260 PF00698 Acyl transferase domain JQX13_48260 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_48260 PF08659 KR domain JQX13_48260 PF00550 Phosphopantetheine attachment site JQX13_48260 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_48260 PF14765 Polyketide synthase dehydratase JQX13_48265 PF02515 CoA-transferase family III JQX13_48275 PF00486 Transcriptional regulatory protein, C terminal JQX13_48275 PF00072 Response regulator receiver domain JQX13_48285 PF02416 mttA/Hcf106 family JQX13_48290 PF00501 AMP-binding enzyme JQX13_48300 PF04545 Sigma-70, region 4 JQX13_48300 PF04539 Sigma-70 region 3 JQX13_48300 PF04542 Sigma-70 region 2 JQX13_48300 PF00140 Sigma-70 factor, region 1.2 JQX13_48305 PF02913 FAD linked oxidases, C-terminal domain JQX13_48305 PF01565 FAD binding domain JQX13_48310 PF01227 GTP cyclohydrolase I JQX13_48340 PF00005 ABC transporter JQX13_48400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQX13_48400 PF00205 Thiamine pyrophosphate enzyme, central domain JQX13_48400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQX13_48420 PF02867 Ribonucleotide reductase, barrel domain JQX13_48420 PF08471 Class II vitamin B12-dependent ribonucleotide reductase JQX13_48430 PF02397 Bacterial sugar transferase JQX13_48435 PF13439 Glycosyltransferase Family 4 JQX13_48435 PF00534 Glycosyl transferases group 1 JQX13_48440 PF13439 Glycosyltransferase Family 4 JQX13_48440 PF00534 Glycosyl transferases group 1 JQX13_48450 PF08459 UvrC Helix-hairpin-helix N-terminal JQX13_48450 PF02151 UvrB/uvrC motif JQX13_48450 PF01541 GIY-YIG catalytic domain JQX13_48460 PF00072 Response regulator receiver domain JQX13_48460 PF00158 Sigma-54 interaction domain JQX13_48460 PF02954 Bacterial regulatory protein, Fis family JQX13_48480 PF03739 Lipopolysaccharide export system permease LptF/LptG JQX13_48485 PF02843 Phosphoribosylglycinamide synthetase, C domain JQX13_48485 PF02844 Phosphoribosylglycinamide synthetase, N domain JQX13_48485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JQX13_48495 PF02142 MGS-like domain JQX13_48495 PF01808 AICARFT/IMPCHase bienzyme JQX13_48500 PF00140 Sigma-70 factor, region 1.2 JQX13_48500 PF04545 Sigma-70, region 4 JQX13_48500 PF04539 Sigma-70 region 3 JQX13_48500 PF04542 Sigma-70 region 2 JQX13_48500 PF03979 Sigma-70 factor, region 1.1 JQX13_48510 PF08308 PEGA domain JQX13_48510 PF00069 Protein kinase domain JQX13_48515 PF00069 Protein kinase domain JQX13_48540 PF06738 Putative threonine/serine exporter JQX13_48550 PF05697 Bacterial trigger factor protein (TF) JQX13_48550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_48550 PF05698 Bacterial trigger factor protein (TF) C-terminus JQX13_48560 PF08543 Phosphomethylpyrimidine kinase JQX13_48565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_48565 PF00512 His Kinase A (phospho-acceptor) domain JQX13_48575 PF00069 Protein kinase domain JQX13_48580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_48580 PF13188 PAS domain JQX13_48580 PF00512 His Kinase A (phospho-acceptor) domain JQX13_48580 PF08448 PAS fold JQX13_48580 PF00072 Response regulator receiver domain JQX13_48585 PF00092 von Willebrand factor type A domain JQX13_48585 PF12450 von Willebrand factor JQX13_48585 PF12034 Domain of unknown function (DUF3520) JQX13_48590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_48590 PF00512 His Kinase A (phospho-acceptor) domain JQX13_48595 PF00072 Response regulator receiver domain JQX13_48595 PF00486 Transcriptional regulatory protein, C terminal JQX13_48600 PF17827 PrmC N-terminal domain JQX13_48600 PF05175 Methyltransferase small domain JQX13_48605 PF14743 DNA ligase OB-like domain JQX13_48605 PF01068 ATP dependent DNA ligase domain JQX13_48615 PF05922 Peptidase inhibitor I9 JQX13_48615 PF00082 Subtilase family JQX13_48635 PF00392 Bacterial regulatory proteins, gntR family JQX13_48635 PF00155 Aminotransferase class I and II JQX13_48640 PF02627 Carboxymuconolactone decarboxylase family JQX13_48655 PF07859 alpha/beta hydrolase fold JQX13_48675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JQX13_48680 PF00873 AcrB/AcrD/AcrF family JQX13_48685 PF01545 Cation efflux family JQX13_48685 PF16916 Dimerisation domain of Zinc Transporter JQX13_48745 PF01695 IstB-like ATP binding protein JQX13_48775 PF03793 PASTA domain JQX13_48775 PF00069 Protein kinase domain JQX13_48805 PF03840 Preprotein translocase SecG subunit JQX13_48810 PF00121 Triosephosphate isomerase JQX13_48815 PF00162 Phosphoglycerate kinase JQX13_48820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JQX13_48820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JQX13_48830 PF01219 Prokaryotic diacylglycerol kinase JQX13_48850 PF10672 S-adenosylmethionine-dependent methyltransferase JQX13_48850 PF17785 PUA-like domain JQX13_48855 PF01852 START domain JQX13_48860 PF01966 HD domain JQX13_48865 PF00437 Type II/IV secretion system protein JQX13_48865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JQX13_48870 PF01026 TatD related DNase JQX13_48880 PF09334 tRNA synthetases class I (M) JQX13_48880 PF01588 Putative tRNA binding domain JQX13_48890 PF01494 FAD binding domain JQX13_48895 PF01053 Cys/Met metabolism PLP-dependent enzyme JQX13_48900 PF01037 Lrp/AsnC ligand binding domain JQX13_48905 PF00313 'Cold-shock' DNA-binding domain JQX13_48920 PF12169 DNA polymerase III subunits gamma and tau domain III JQX13_48930 PF06441 Epoxide hydrolase N terminus JQX13_48935 PF00994 Probable molybdopterin binding domain JQX13_48945 PF02811 PHP domain JQX13_48945 PF14716 Helix-hairpin-helix domain JQX13_48945 PF14791 DNA polymerase beta thumb JQX13_48965 PF00012 Hsp70 protein JQX13_48970 PF00684 DnaJ central domain JQX13_48970 PF01556 DnaJ C terminal domain JQX13_48970 PF00226 DnaJ domain JQX13_48980 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_48980 PF07724 AAA domain (Cdc48 subfamily) JQX13_48980 PF06689 ClpX C4-type zinc finger JQX13_48985 PF17810 Arginine decarboxylase helical bundle domain JQX13_48985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JQX13_48985 PF17944 Arginine decarboxylase C-terminal helical extension JQX13_48990 PF01725 Ham1 family JQX13_49025 PF10518 TAT (twin-arginine translocation) pathway signal sequence JQX13_49025 PF00149 Calcineurin-like phosphoesterase JQX13_49045 PF01916 Deoxyhypusine synthase JQX13_49055 PF02082 Transcriptional regulator JQX13_49060 PF02811 PHP domain JQX13_49065 PF00067 Cytochrome P450 JQX13_49070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_49075 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JQX13_49080 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JQX13_49085 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JQX13_49090 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JQX13_49095 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal JQX13_49095 PF00384 Molybdopterin oxidoreductase JQX13_49095 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JQX13_49100 PF00146 NADH dehydrogenase JQX13_49105 PF00037 4Fe-4S binding domain JQX13_49115 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_49165 PF08460 Bacterial SH3 domain JQX13_49165 PF01551 Peptidase family M23 JQX13_49170 PF00378 Enoyl-CoA hydratase/isomerase JQX13_49175 PF08359 YsiA-like protein, C-terminal region JQX13_49175 PF00440 Bacterial regulatory proteins, tetR family JQX13_49185 PF01381 Helix-turn-helix JQX13_49200 PF02875 Mur ligase family, glutamate ligase domain JQX13_49200 PF08245 Mur ligase middle domain JQX13_49205 PF17848 Acetyl-coA carboxylase zinc finger domain JQX13_49205 PF01039 Carboxyl transferase domain JQX13_49215 PF00027 Cyclic nucleotide-binding domain JQX13_49215 PF13545 Crp-like helix-turn-helix domain JQX13_49225 PF00586 AIR synthase related protein, N-terminal domain JQX13_49225 PF02769 AIR synthase related protein, C-terminal domain JQX13_49230 PF00551 Formyl transferase JQX13_49235 PF04463 Protein of unknown function (DUF523) JQX13_49240 PF04376 Arginine-tRNA-protein transferase, N terminus JQX13_49240 PF04377 Arginine-tRNA-protein transferase, C terminus JQX13_49250 PF00830 Ribosomal L28 family JQX13_49255 PF13580 SIS domain JQX13_49280 PF02798 Glutathione S-transferase, N-terminal domain JQX13_49280 PF00043 Glutathione S-transferase, C-terminal domain JQX13_49285 PF01546 Peptidase family M20/M25/M40 JQX13_49285 PF07687 Peptidase dimerisation domain JQX13_49295 PF03702 Anhydro-N-acetylmuramic acid kinase JQX13_49300 PF00025 ADP-ribosylation factor family JQX13_49335 PF00144 Beta-lactamase JQX13_49340 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_49350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQX13_49350 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_49350 PF00403 Heavy-metal-associated domain JQX13_49390 PF03315 Serine dehydratase beta chain JQX13_49390 PF03313 Serine dehydratase alpha chain JQX13_49405 PF03423 Carbohydrate binding domain (family 25) JQX13_49405 PF03065 Glycosyl hydrolase family 57 JQX13_49405 PF00041 Fibronectin type III domain JQX13_49430 PF05649 Peptidase family M13 JQX13_49430 PF01431 Peptidase family M13 JQX13_49445 PF00698 Acyl transferase domain JQX13_49445 PF14765 Polyketide synthase dehydratase JQX13_49445 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_49445 PF00550 Phosphopantetheine attachment site JQX13_49445 PF00107 Zinc-binding dehydrogenase JQX13_49445 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_49445 PF08659 KR domain JQX13_49445 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_49445 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_49460 PF02733 Dak1 domain JQX13_49460 PF02734 DAK2 domain JQX13_49470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JQX13_49470 PF01872 RibD C-terminal domain JQX13_49480 PF05175 Methyltransferase small domain JQX13_49480 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus JQX13_49485 PF08543 Phosphomethylpyrimidine kinase JQX13_49490 PF17203 Single cache domain 3 JQX13_49490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_49490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JQX13_49495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JQX13_49495 PF13457 GW (Gly-Tryp) dipeptide domain JQX13_49505 PF13191 AAA ATPase domain JQX13_49505 PF00211 Adenylate and Guanylate cyclase catalytic domain JQX13_49510 PF00512 His Kinase A (phospho-acceptor) domain JQX13_49510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_49515 PF00291 Pyridoxal-phosphate dependent enzyme JQX13_49515 PF13291 ACT domain JQX13_49520 PF00069 Protein kinase domain JQX13_49520 PF08308 PEGA domain JQX13_49550 PF00561 alpha/beta hydrolase fold JQX13_49565 PF01926 50S ribosome-binding GTPase JQX13_49565 PF16360 GTP-binding GTPase Middle Region JQX13_49565 PF13167 GTP-binding GTPase N-terminal JQX13_49570 PF03793 PASTA domain JQX13_49570 PF00069 Protein kinase domain JQX13_49620 PF00106 short chain dehydrogenase JQX13_49625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JQX13_49625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JQX13_49625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JQX13_49640 PF09335 SNARE associated Golgi protein JQX13_49645 PF00072 Response regulator receiver domain JQX13_49645 PF01627 Hpt domain JQX13_49645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_49645 PF01584 CheW-like domain JQX13_49655 PF00072 Response regulator receiver domain JQX13_49660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_49660 PF02743 Cache domain JQX13_49660 PF00672 HAMP domain JQX13_49665 PF01739 CheR methyltransferase, SAM binding domain JQX13_49675 PF00069 Protein kinase domain JQX13_49700 PF00749 tRNA synthetases class I (E and Q), catalytic domain JQX13_49725 PF00158 Sigma-54 interaction domain JQX13_49725 PF00072 Response regulator receiver domain JQX13_49725 PF02954 Bacterial regulatory protein, Fis family JQX13_49735 PF00512 His Kinase A (phospho-acceptor) domain JQX13_49735 PF08448 PAS fold JQX13_49735 PF00072 Response regulator receiver domain JQX13_49735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_49735 PF13188 PAS domain JQX13_49750 PF02817 e3 binding domain JQX13_49750 PF00364 Biotin-requiring enzyme JQX13_49750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JQX13_49755 PF00364 Biotin-requiring enzyme JQX13_49755 PF02780 Transketolase, C-terminal domain JQX13_49755 PF02779 Transketolase, pyrimidine binding domain JQX13_49760 PF00676 Dehydrogenase E1 component JQX13_49785 PF00149 Calcineurin-like phosphoesterase JQX13_49785 PF02872 5'-nucleotidase, C-terminal domain JQX13_49810 PF01523 Putative modulator of DNA gyrase JQX13_49815 PF01523 Putative modulator of DNA gyrase JQX13_49825 PF00437 Type II/IV secretion system protein JQX13_49825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JQX13_49835 PF03900 Porphobilinogen deaminase, C-terminal domain JQX13_49835 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JQX13_49840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JQX13_49840 PF01488 Shikimate / quinate 5-dehydrogenase JQX13_49840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JQX13_49845 PF01578 Cytochrome C assembly protein JQX13_49855 PF00085 Thioredoxin JQX13_49865 PF03448 MgtE intracellular N domain JQX13_49865 PF00571 CBS domain JQX13_49865 PF01769 Divalent cation transporter JQX13_49870 PF01098 Cell cycle protein JQX13_49875 PF03717 Penicillin-binding Protein dimerisation domain JQX13_49875 PF00905 Penicillin binding protein transpeptidase domain JQX13_49885 PF04085 rod shape-determining protein MreC JQX13_49890 PF00639 PPIC-type PPIASE domain JQX13_49890 PF09312 SurA N-terminal domain JQX13_49895 PF00990 Diguanylate cyclase, GGDEF domain JQX13_49895 PF13426 PAS domain JQX13_49895 PF00563 EAL domain JQX13_49900 PF02545 Maf-like protein JQX13_49905 PF01168 Alanine racemase, N-terminal domain JQX13_49945 PF08459 UvrC Helix-hairpin-helix N-terminal JQX13_49945 PF01541 GIY-YIG catalytic domain JQX13_49945 PF02151 UvrB/uvrC motif JQX13_49945 PF12826 Helix-hairpin-helix motif JQX13_49950 PF00271 Helicase conserved C-terminal domain JQX13_49950 PF04851 Type III restriction enzyme, res subunit JQX13_49950 PF12344 Ultra-violet resistance protein B JQX13_49950 PF17757 UvrB interaction domain JQX13_49950 PF02151 UvrB/uvrC motif JQX13_49960 PF09190 DALR domain JQX13_49960 PF01406 tRNA synthetases class I (C) catalytic domain JQX13_49965 PF16697 Inner membrane component of T3SS, cytoplasmic domain JQX13_49975 PF02559 CarD-like/TRCF domain JQX13_49980 PF03772 Competence protein JQX13_49980 PF00753 Metallo-beta-lactamase superfamily JQX13_50005 PF00709 Adenylosuccinate synthetase JQX13_50010 PF12705 PD-(D/E)XK nuclease superfamily JQX13_50010 PF00580 UvrD/REP helicase N-terminal domain JQX13_50010 PF13361 UvrD-like helicase C-terminal domain JQX13_50025 PF03033 Glycosyltransferase family 28 N-terminal domain JQX13_50025 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JQX13_50045 PF17760 UvrA interaction domain JQX13_50045 PF17755 UvrA DNA-binding domain JQX13_50050 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JQX13_50055 PF00266 Aminotransferase class-V JQX13_50070 PF00665 Integrase core domain JQX13_50075 PF01695 IstB-like ATP binding protein JQX13_50080 PF01695 IstB-like ATP binding protein JQX13_50085 PF00665 Integrase core domain JQX13_50095 PF12796 Ankyrin repeats (3 copies) JQX13_50140 PF08279 HTH domain JQX13_50140 PF13280 WYL domain JQX13_50190 PF01139 tRNA-splicing ligase RtcB JQX13_50195 PF02033 Ribosome-binding factor A JQX13_50200 PF01641 SelR domain JQX13_50205 PF01555 DNA methylase JQX13_50210 PF01197 Ribosomal protein L31 JQX13_50225 PF01739 CheR methyltransferase, SAM binding domain JQX13_50230 PF01339 CheB methylesterase JQX13_50230 PF00072 Response regulator receiver domain JQX13_50235 PF00072 Response regulator receiver domain JQX13_50235 PF01584 CheW-like domain JQX13_50235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_50235 PF01627 Hpt domain JQX13_50240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_50245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_50260 PF00691 OmpA family JQX13_50275 PF02954 Bacterial regulatory protein, Fis family JQX13_50275 PF00158 Sigma-54 interaction domain JQX13_50275 PF00072 Response regulator receiver domain JQX13_50280 PF12167 Arm DNA-binding domain JQX13_50280 PF00589 Phage integrase family JQX13_50495 PF07681 DoxX JQX13_50500 PF09423 PhoD-like phosphatase JQX13_50500 PF16655 PhoD-like phosphatase, N-terminal domain JQX13_50505 PF04545 Sigma-70, region 4 JQX13_50505 PF04542 Sigma-70 region 2 JQX13_50505 PF00140 Sigma-70 factor, region 1.2 JQX13_50510 PF00571 CBS domain JQX13_50510 PF00478 IMP dehydrogenase / GMP reductase domain JQX13_50520 PF00082 Subtilase family JQX13_50520 PF05922 Peptidase inhibitor I9 JQX13_50525 PF05199 GMC oxidoreductase JQX13_50545 PF12697 Alpha/beta hydrolase family JQX13_50550 PF00891 O-methyltransferase domain JQX13_50565 PF04542 Sigma-70 region 2 JQX13_50565 PF08281 Sigma-70, region 4 JQX13_50570 PF00753 Metallo-beta-lactamase superfamily JQX13_50580 PF03372 Endonuclease/Exonuclease/phosphatase family JQX13_50590 PF00905 Penicillin binding protein transpeptidase domain JQX13_50590 PF17092 Penicillin-binding protein OB-like domain JQX13_50590 PF00912 Transglycosylase JQX13_50600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JQX13_50600 PF12793 Sugar transport-related sRNA regulator N-term JQX13_50605 PF00989 PAS fold JQX13_50605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_50605 PF00672 HAMP domain JQX13_50605 PF00512 His Kinase A (phospho-acceptor) domain JQX13_50630 PF00271 Helicase conserved C-terminal domain JQX13_50630 PF00270 DEAD/DEAH box helicase JQX13_50640 PF13533 Biotin-lipoyl like JQX13_50645 PF03144 Elongation factor Tu domain 2 JQX13_50645 PF00009 Elongation factor Tu GTP binding domain JQX13_50645 PF03143 Elongation factor Tu C-terminal domain JQX13_50650 PF00069 Protein kinase domain JQX13_50660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JQX13_50660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JQX13_50675 PF00072 Response regulator receiver domain JQX13_50675 PF00486 Transcriptional regulatory protein, C terminal JQX13_50700 PF00691 OmpA family JQX13_50700 PF05736 OprF membrane domain JQX13_50710 PF13407 Periplasmic binding protein domain JQX13_50715 PF00480 ROK family JQX13_50720 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JQX13_50725 PF00005 ABC transporter JQX13_50730 PF02653 Branched-chain amino acid transport system / permease component JQX13_50735 PF00942 Cellulose binding domain JQX13_50735 PF12891 Glycoside hydrolase family 44 JQX13_50750 PF01142 tRNA pseudouridine synthase D (TruD) JQX13_50760 PF06965 Na+/H+ antiporter 1 JQX13_50760 PF13462 Thioredoxin JQX13_50765 PF00710 Asparaginase, N-terminal JQX13_50765 PF17763 Glutaminase/Asparaginase C-terminal domain JQX13_50770 PF17151 Periplasmic sensor domain JQX13_50770 PF00990 Diguanylate cyclase, GGDEF domain JQX13_50785 PF01165 Ribosomal protein S21 JQX13_50795 PF01807 CHC2 zinc finger JQX13_50795 PF10410 DnaB-helicase binding domain of primase JQX13_50795 PF08275 DNA primase catalytic core, N-terminal domain JQX13_50800 PF04546 Sigma-70, non-essential region JQX13_50800 PF03979 Sigma-70 factor, region 1.1 JQX13_50800 PF04539 Sigma-70 region 3 JQX13_50800 PF04542 Sigma-70 region 2 JQX13_50800 PF00140 Sigma-70 factor, region 1.2 JQX13_50800 PF04545 Sigma-70, region 4 JQX13_50835 PF00313 'Cold-shock' DNA-binding domain JQX13_50850 PF00072 Response regulator receiver domain JQX13_50850 PF00486 Transcriptional regulatory protein, C terminal JQX13_50855 PF00672 HAMP domain JQX13_50855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_50855 PF00512 His Kinase A (phospho-acceptor) domain JQX13_50865 PF01061 ABC-2 type transporter JQX13_50870 PF00005 ABC transporter JQX13_50875 PF01040 UbiA prenyltransferase family JQX13_50895 PF00012 Hsp70 protein JQX13_50900 PF00012 Hsp70 protein JQX13_50920 PF01734 Patatin-like phospholipase JQX13_50935 PF00534 Glycosyl transferases group 1 JQX13_50940 PF08323 Starch synthase catalytic domain JQX13_50955 PF00535 Glycosyl transferase family 2 JQX13_50970 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_50985 PF01491 Frataxin-like domain JQX13_50995 PF01765 Ribosome recycling factor JQX13_51000 PF00696 Amino acid kinase family JQX13_51005 PF00889 Elongation factor TS JQX13_51010 PF00318 Ribosomal protein S2 JQX13_51015 PF07516 SecA Wing and Scaffold domain JQX13_51015 PF07517 SecA DEAD-like domain JQX13_51015 PF01043 SecA preprotein cross-linking domain JQX13_51015 PF02810 SEC-C motif JQX13_51020 PF01728 FtsJ-like methyltransferase JQX13_51020 PF18125 RlmM ferredoxin-like domain JQX13_51030 PF01551 Peptidase family M23 JQX13_51030 PF01476 LysM domain JQX13_51030 PF08525 Opacity-associated protein A N-terminal motif JQX13_51040 PF02463 RecF/RecN/SMC N terminal domain JQX13_51045 PF00176 SNF2 family N-terminal domain JQX13_51045 PF00271 Helicase conserved C-terminal domain JQX13_51045 PF12419 SNF2 Helicase protein JQX13_51055 PF00156 Phosphoribosyl transferase domain JQX13_51060 PF00512 His Kinase A (phospho-acceptor) domain JQX13_51060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_51060 PF02702 Osmosensitive K+ channel His kinase sensor domain JQX13_51060 PF13493 Domain of unknown function (DUF4118) JQX13_51085 PF07690 Major Facilitator Superfamily JQX13_51090 PF01467 Cytidylyltransferase-like JQX13_51100 PF02872 5'-nucleotidase, C-terminal domain JQX13_51100 PF00149 Calcineurin-like phosphoesterase JQX13_51105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_51105 PF03466 LysR substrate binding domain JQX13_51110 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JQX13_51120 PF01513 ATP-NAD kinase JQX13_51125 PF16193 AAA C-terminal domain JQX13_51125 PF12002 MgsA AAA+ ATPase C terminal JQX13_51125 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_51130 PF00072 Response regulator receiver domain JQX13_51130 PF02954 Bacterial regulatory protein, Fis family JQX13_51130 PF00158 Sigma-54 interaction domain JQX13_51135 PF00512 His Kinase A (phospho-acceptor) domain JQX13_51135 PF08448 PAS fold JQX13_51135 PF00072 Response regulator receiver domain JQX13_51135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_51135 PF13188 PAS domain JQX13_51140 PF00990 Diguanylate cyclase, GGDEF domain JQX13_51140 PF05230 MASE2 domain JQX13_51145 PF00535 Glycosyl transferase family 2 JQX13_51165 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal JQX13_51165 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JQX13_51165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JQX13_51170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JQX13_51170 PF00378 Enoyl-CoA hydratase/isomerase JQX13_51170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JQX13_51175 PF00108 Thiolase, N-terminal domain JQX13_51175 PF02803 Thiolase, C-terminal domain JQX13_51190 PF01208 Uroporphyrinogen decarboxylase (URO-D) JQX13_51245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JQX13_51245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JQX13_51250 PF06029 AlkA N-terminal domain JQX13_51250 PF02805 Metal binding domain of Ada JQX13_51250 PF12833 Helix-turn-helix domain JQX13_51250 PF00730 HhH-GPD superfamily base excision DNA repair protein JQX13_51260 PF00561 alpha/beta hydrolase fold JQX13_51270 PF00072 Response regulator receiver domain JQX13_51270 PF04397 LytTr DNA-binding domain JQX13_51310 PF07728 AAA domain (dynein-related subfamily) JQX13_51310 PF12102 Domain of unknown function (DUF3578) JQX13_51315 PF13360 PQQ-like domain JQX13_51315 PF00069 Protein kinase domain JQX13_51320 PF03793 PASTA domain JQX13_51320 PF00069 Protein kinase domain JQX13_51340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_51340 PF03466 LysR substrate binding domain JQX13_51345 PF00857 Isochorismatase family JQX13_51350 PF03466 LysR substrate binding domain JQX13_51350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_51360 PF00210 Ferritin-like domain JQX13_51370 PF00248 Aldo/keto reductase family JQX13_51395 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JQX13_51410 PF00069 Protein kinase domain JQX13_51410 PF03793 PASTA domain JQX13_51415 PF00072 Response regulator receiver domain JQX13_51415 PF00158 Sigma-54 interaction domain JQX13_51445 PF13542 Helix-turn-helix domain of transposase family ISL3 JQX13_51445 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JQX13_51445 PF01610 Transposase JQX13_51475 PF00873 AcrB/AcrD/AcrF family JQX13_51480 PF00529 HlyD membrane-fusion protein of T1SS JQX13_51480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JQX13_51485 PF02321 Outer membrane efflux protein JQX13_51495 PF13520 Amino acid permease JQX13_51535 PF12034 Domain of unknown function (DUF3520) JQX13_51535 PF00092 von Willebrand factor type A domain JQX13_51535 PF12450 von Willebrand factor JQX13_51560 PF00067 Cytochrome P450 JQX13_51565 PF00067 Cytochrome P450 JQX13_51570 PF00158 Sigma-54 interaction domain JQX13_51570 PF00072 Response regulator receiver domain JQX13_51570 PF02954 Bacterial regulatory protein, Fis family JQX13_51580 PF04055 Radical SAM superfamily JQX13_51580 PF06969 HemN C-terminal domain JQX13_51585 PF13746 4Fe-4S dicluster domain JQX13_51585 PF12801 4Fe-4S binding domain JQX13_51585 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JQX13_51590 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JQX13_51590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JQX13_51600 PF00115 Cytochrome C and Quinol oxidase polypeptide I JQX13_51610 PF00403 Heavy-metal-associated domain JQX13_51635 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_51635 PF00107 Zinc-binding dehydrogenase JQX13_51650 PF01084 Ribosomal protein S18 JQX13_51655 PF00830 Ribosomal L28 family JQX13_51665 PF00909 Ammonium Transporter Family JQX13_51670 PF03065 Glycosyl hydrolase family 57 JQX13_51670 PF00041 Fibronectin type III domain JQX13_51670 PF03423 Carbohydrate binding domain (family 25) JQX13_51675 PF00150 Cellulase (glycosyl hydrolase family 5) JQX13_51675 PF00553 Cellulose binding domain JQX13_51680 PF02653 Branched-chain amino acid transport system / permease component JQX13_51685 PF00005 ABC transporter JQX13_51690 PF13407 Periplasmic binding protein domain JQX13_51700 PF01547 Bacterial extracellular solute-binding protein JQX13_51705 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_51710 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_51715 PF13416 Bacterial extracellular solute-binding protein JQX13_51750 PF13247 4Fe-4S dicluster domain JQX13_51750 PF00037 4Fe-4S binding domain JQX13_51775 PF00501 AMP-binding enzyme JQX13_51775 PF00550 Phosphopantetheine attachment site JQX13_51775 PF13193 AMP-binding enzyme C-terminal domain JQX13_51775 PF00668 Condensation domain JQX13_51775 PF07993 Male sterility protein JQX13_51780 PF00550 Phosphopantetheine attachment site JQX13_51780 PF00668 Condensation domain JQX13_51780 PF13193 AMP-binding enzyme C-terminal domain JQX13_51780 PF00501 AMP-binding enzyme JQX13_51785 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_51785 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_51785 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_51785 PF14765 Polyketide synthase dehydratase JQX13_51785 PF00698 Acyl transferase domain JQX13_51785 PF08659 KR domain JQX13_51785 PF00550 Phosphopantetheine attachment site JQX13_51790 PF00698 Acyl transferase domain JQX13_51790 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_51790 PF16197 Ketoacyl-synthetase C-terminal extension JQX13_51790 PF00109 Beta-ketoacyl synthase, N-terminal domain JQX13_51790 PF02801 Beta-ketoacyl synthase, C-terminal domain JQX13_51790 PF08659 KR domain JQX13_51790 PF00550 Phosphopantetheine attachment site JQX13_51790 PF14765 Polyketide synthase dehydratase JQX13_51800 PF02423 Ornithine cyclodeaminase/mu-crystallin family JQX13_51805 PF00355 Rieske [2Fe-2S] domain JQX13_51810 PF08241 Methyltransferase domain JQX13_51815 PF03150 Di-haem cytochrome c peroxidase JQX13_51815 PF00034 Cytochrome c JQX13_51835 PF03150 Di-haem cytochrome c peroxidase JQX13_51835 PF00034 Cytochrome c JQX13_51840 PF03942 DTW domain JQX13_51845 PF00067 Cytochrome P450 JQX13_51865 PF00557 Metallopeptidase family M24 JQX13_51865 PF05195 Aminopeptidase P, N-terminal domain JQX13_51885 PF00462 Glutaredoxin JQX13_51890 PF01722 BolA-like protein JQX13_51895 PF02622 Uncharacterized ACR, COG1678 JQX13_51900 PF00072 Response regulator receiver domain JQX13_51905 PF12911 N-terminal TM domain of oligopeptide transport permease C JQX13_51905 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_51910 PF00528 Binding-protein-dependent transport system inner membrane component JQX13_51915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JQX13_51920 PF02190 ATP-dependent protease La (LON) substrate-binding domain JQX13_51920 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_51920 PF05362 Lon protease (S16) C-terminal proteolytic domain JQX13_51925 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JQX13_51925 PF00326 Prolyl oligopeptidase family JQX13_51930 PF07724 AAA domain (Cdc48 subfamily) JQX13_51930 PF10431 C-terminal, D2-small domain, of ClpB protein JQX13_51930 PF06689 ClpX C4-type zinc finger JQX13_51935 PF00574 Clp protease JQX13_51940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQX13_51940 PF05697 Bacterial trigger factor protein (TF) JQX13_51940 PF05698 Bacterial trigger factor protein (TF) C-terminus JQX13_51985 PF01425 Amidase JQX13_52010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JQX13_52010 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_52015 PF00561 alpha/beta hydrolase fold JQX13_52040 PF01725 Ham1 family JQX13_52045 PF03725 3' exoribonuclease family, domain 2 JQX13_52045 PF01138 3' exoribonuclease family, domain 1 JQX13_52050 PF01520 N-acetylmuramoyl-L-alanine amidase JQX13_52050 PF11741 AMIN domain JQX13_52060 PF16697 Inner membrane component of T3SS, cytoplasmic domain JQX13_52070 PF13525 Outer membrane lipoprotein JQX13_52075 PF02631 RecX family JQX13_52085 PF01434 Peptidase family M41 JQX13_52085 PF00004 ATPase family associated with various cellular activities (AAA) JQX13_52085 PF17862 AAA+ lid domain JQX13_52100 PF00437 Type II/IV secretion system protein JQX13_52105 PF00380 Ribosomal protein S9/S16 JQX13_52110 PF00572 Ribosomal protein L13 JQX13_52115 PF13361 UvrD-like helicase C-terminal domain JQX13_52115 PF00580 UvrD/REP helicase N-terminal domain JQX13_52185 PF01026 TatD related DNase JQX13_52190 PF00899 ThiF family JQX13_52205 PF00106 short chain dehydrogenase JQX13_52210 PF14815 NUDIX domain JQX13_52210 PF00633 Helix-hairpin-helix motif JQX13_52210 PF00730 HhH-GPD superfamily base excision DNA repair protein JQX13_52225 PF12697 Alpha/beta hydrolase family JQX13_52235 PF02743 Cache domain JQX13_52235 PF00672 HAMP domain JQX13_52235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JQX13_52240 PF00067 Cytochrome P450 JQX13_52245 PF00432 Prenyltransferase and squalene oxidase repeat JQX13_52245 PF13243 Squalene-hopene cyclase C-terminal domain JQX13_52255 PF02607 B12 binding domain JQX13_52255 PF02574 Homocysteine S-methyltransferase JQX13_52255 PF02965 Vitamin B12 dependent methionine synthase, activation domain JQX13_52255 PF02310 B12 binding domain JQX13_52255 PF00809 Pterin binding enzyme JQX13_52260 PF01209 ubiE/COQ5 methyltransferase family JQX13_52280 PF01593 Flavin containing amine oxidoreductase JQX13_52290 PF00069 Protein kinase domain JQX13_52300 PF02909 Tetracyclin repressor-like, C-terminal domain JQX13_52300 PF00440 Bacterial regulatory proteins, tetR family JQX13_52305 PF01494 FAD binding domain JQX13_52325 PF13369 Transglutaminase-like superfamily JQX13_52330 PF00293 NUDIX domain JQX13_52345 PF01553 Acyltransferase JQX13_52345 PF00501 AMP-binding enzyme JQX13_52360 PF00743 Flavin-binding monooxygenase-like JQX13_52375 PF00512 His Kinase A (phospho-acceptor) domain JQX13_52375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_52375 PF08521 Two-component sensor kinase N-terminal JQX13_52380 PF00072 Response regulator receiver domain JQX13_52380 PF00486 Transcriptional regulatory protein, C terminal JQX13_52410 PF00857 Isochorismatase family JQX13_52415 PF09278 MerR, DNA binding JQX13_52415 PF00376 MerR family regulatory protein JQX13_52440 PF01609 Transposase DDE domain JQX13_52445 PF13360 PQQ-like domain JQX13_52445 PF00069 Protein kinase domain JQX13_52455 PF07859 alpha/beta hydrolase fold JQX13_52475 PF00069 Protein kinase domain JQX13_52475 PF03793 PASTA domain JQX13_52485 PF00107 Zinc-binding dehydrogenase JQX13_52485 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_52490 PF01381 Helix-turn-helix JQX13_52535 PF01618 MotA/TolQ/ExbB proton channel family JQX13_52540 PF02472 Biopolymer transport protein ExbD/TolR JQX13_52545 PF02472 Biopolymer transport protein ExbD/TolR JQX13_52555 PF07730 Histidine kinase JQX13_52555 PF13185 GAF domain JQX13_52555 PF13492 GAF domain JQX13_52555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQX13_52560 PF04239 Protein of unknown function (DUF421) JQX13_52600 PF13229 Right handed beta helix region JQX13_52620 PF03466 LysR substrate binding domain JQX13_52620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQX13_52625 PF07690 Major Facilitator Superfamily JQX13_52630 PF17820 PDZ domain JQX13_52630 PF02163 Peptidase family M50 JQX13_52650 PF00107 Zinc-binding dehydrogenase JQX13_52650 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_52655 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JQX13_52655 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JQX13_52660 PF08240 Alcohol dehydrogenase GroES-like domain JQX13_52660 PF00107 Zinc-binding dehydrogenase JQX13_52675 PF00440 Bacterial regulatory proteins, tetR family JQX13_52685 PF01967 MoaC family JQX13_52690 PF01053 Cys/Met metabolism PLP-dependent enzyme JQX13_52695 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQX13_52710 PF00486 Transcriptional regulatory protein, C terminal JQX13_52710 PF00072 Response regulator receiver domain JQX13_52715 PF00990 Diguanylate cyclase, GGDEF domain JQX13_52715 PF00072 Response regulator receiver domain JQX13_52730 PF04002 RadC-like JAB domain JQX13_52740 PF09382 RQC domain JQX13_52740 PF16124 RecQ zinc-binding JQX13_52740 PF00570 HRDC domain JQX13_52740 PF00270 DEAD/DEAH box helicase JQX13_52740 PF00271 Helicase conserved C-terminal domain JQX13_52765 PF01553 Acyltransferase JQX13_52775 PF03793 PASTA domain JQX13_52775 PF00069 Protein kinase domain JQX13_52785 PF00535 Glycosyl transferase family 2 JQX13_52790 PF01593 Flavin containing amine oxidoreductase JQX13_52800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JQX13_52800 PF02403 Seryl-tRNA synthetase N-terminal domain JQX13_52820 PF14437 MafB19-like deaminase JQX13_52845 PF12169 DNA polymerase III subunits gamma and tau domain III JQX13_52845 PF12170 DNA polymerase III tau subunit V interacting with alpha JQX13_52845 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JQX13_52855 PF02575 YbaB/EbfC DNA-binding family JQX13_52860 PF13662 Toprim domain JQX13_52860 PF02132 RecR protein JQX13_52865 PF00069 Protein kinase domain JQX13_52885 PF00025 ADP-ribosylation factor family JQX13_52920 PF00520 Ion transport protein JQX13_52920 PF00027 Cyclic nucleotide-binding domain JQX13_52940 PF00459 Inositol monophosphatase family JQX13_52945 PF08534 Redoxin JQX13_52950 PF01225 Mur ligase family, catalytic domain JQX13_52950 PF08245 Mur ligase middle domain JQX13_52950 PF02875 Mur ligase family, glutamate ligase domain JQX13_52955 PF00144 Beta-lactamase JQX13_52960 PF02016 LD-carboxypeptidase N-terminal domain JQX13_52960 PF17676 LD-carboxypeptidase C-terminal domain JQX13_52965 PF01029 NusB family JQX13_52965 PF01189 16S rRNA methyltransferase RsmB/F JQX13_53025 PF02796 Helix-turn-helix domain of resolvase JQX13_53025 PF00239 Resolvase, N terminal domain JQX13_53090 PF00589 Phage integrase family JQX13_53090 PF02899 Phage integrase, N-terminal SAM-like domain JQX13_53120 PF07714 Protein tyrosine kinase JQX13_53125 PF00069 Protein kinase domain JQX13_53135 PF04860 Phage portal protein JQX13_53150 PF01381 Helix-turn-helix JQX13_53150 PF00717 Peptidase S24-like JQX13_53170 PF14550 Putative phage serine protease XkdF JQX13_53345 PF02796 Helix-turn-helix domain of resolvase JQX13_53345 PF00239 Resolvase, N terminal domain JQX13_53350 PF02661 Fic/DOC family JQX13_53360 PF08003 Protein of unknown function (DUF1698) JQX13_53390 PF01695 IstB-like ATP binding protein JQX13_53395 PF00665 Integrase core domain JQX13_53395 PF02796 Helix-turn-helix domain of resolvase JQX13_53470 PF07508 Recombinase JQX13_53470 PF13408 Recombinase zinc beta ribbon domain JQX13_53470 PF00239 Resolvase, N terminal domain JQX13_53505 PF00857 Isochorismatase family JQX13_53510 PF09278 MerR, DNA binding JQX13_53510 PF00376 MerR family regulatory protein