locus-tag class description AACT_0001 PF00308 Bacterial dnaA protein AACT_0001 PF08299 Bacterial dnaA protein helix-turn-helix AACT_0001 PF11638 DnaA N-terminal domain AACT_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain AACT_0002 PF02767 DNA polymerase III beta subunit, central domain AACT_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain AACT_0003 PF00204 DNA gyrase B AACT_0003 PF00986 DNA gyrase B subunit, carboxyl terminus AACT_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0003 PF01751 Toprim domain AACT_0004 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_0005 PF14489 QueF-like protein AACT_0009 PF09335 SNARE associated Golgi protein AACT_0011 PF06689 ClpX C4-type zinc finger AACT_0011 PF10431 C-terminal, D2-small domain, of ClpB protein AACT_0011 PF07724 AAA domain (Cdc48 subfamily) AACT_0014 PF01590 GAF domain AACT_0014 PF02954 Bacterial regulatory protein, Fis family AACT_0014 PF00158 Sigma-54 interaction domain AACT_0016 PF00890 FAD binding domain AACT_0016 PF02910 Fumarate reductase flavoprotein C-term AACT_0017 PF00248 Aldo/keto reductase family AACT_0018 PF00005 ABC transporter AACT_0018 PF12857 TOBE-like domain AACT_0020 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0023 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACT_0023 PF03459 TOBE domain AACT_0024 PF11844 Domain of unknown function (DUF3364) AACT_0024 PF00148 Nitrogenase component 1 type Oxidoreductase AACT_0025 PF00148 Nitrogenase component 1 type Oxidoreductase AACT_0027 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AACT_0028 PF00309 Sigma-54 factor, Activator interacting domain (AID) AACT_0028 PF04963 Sigma-54 factor, core binding domain AACT_0028 PF04552 Sigma-54, DNA binding domain AACT_0029 PF00111 2Fe-2S iron-sulfur cluster binding domain AACT_0031 PF04319 NifZ domain AACT_0032 PF03206 Nitrogen fixation protein NifW AACT_0033 PF00258 Flavodoxin AACT_0034 PF03270 Protein of unknown function, DUF269 AACT_0035 PF02579 Dinitrogenase iron-molybdenum cofactor AACT_0040 PF00148 Nitrogenase component 1 type Oxidoreductase AACT_0041 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACT_0041 PF03466 LysR substrate binding domain AACT_0044 PF13478 XdhC Rossmann domain AACT_0044 PF02625 XdhC and CoxI family AACT_0045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AACT_0046 PF00111 2Fe-2S iron-sulfur cluster binding domain AACT_0046 PF01799 [2Fe-2S] binding domain AACT_0047 PF06719 AraC-type transcriptional regulator N-terminus AACT_0047 PF12833 Helix-turn-helix domain AACT_0048 PF00148 Nitrogenase component 1 type Oxidoreductase AACT_0051 PF02579 Dinitrogenase iron-molybdenum cofactor AACT_0052 PF00258 Flavodoxin AACT_0052 PF00753 Metallo-beta-lactamase superfamily AACT_0053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACT_0053 PF03466 LysR substrate binding domain AACT_0056 PF04055 Radical SAM superfamily AACT_0056 PF02579 Dinitrogenase iron-molybdenum cofactor AACT_0059 PF00682 HMGL-like AACT_0065 PF10518 TAT (twin-arginine translocation) pathway signal sequence AACT_0065 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AACT_0065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AACT_0066 PF00374 Nickel-dependent hydrogenase AACT_0067 PF00849 RNA pseudouridylate synthase AACT_0068 PF00206 Lyase AACT_0068 PF10397 Adenylosuccinate lyase C-terminus AACT_0069 PF00317 Ribonucleotide reductase, all-alpha domain AACT_0069 PF02867 Ribonucleotide reductase, barrel domain AACT_0069 PF03477 ATP cone domain AACT_0070 PF00268 Ribonucleotide reductase, small chain AACT_0075 PF01928 CYTH domain AACT_0078 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_0078 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AACT_0079 PF00691 OmpA family AACT_0079 PF05736 OprF membrane domain AACT_0081 PF08240 Alcohol dehydrogenase GroES-like domain AACT_0081 PF00107 Zinc-binding dehydrogenase AACT_0082 PF01638 HxlR-like helix-turn-helix AACT_0083 PF03649 Uncharacterised protein family (UPF0014) AACT_0085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AACT_0085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AACT_0086 PF02934 GatB/GatE catalytic domain AACT_0086 PF02637 GatB domain AACT_0088 PF02913 FAD linked oxidases, C-terminal domain AACT_0088 PF01565 FAD binding domain AACT_0089 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AACT_0091 PF03480 Bacterial extracellular solute-binding protein, family 7 AACT_0092 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_0093 PF01575 MaoC like domain AACT_0095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACT_0095 PF02770 Acyl-CoA dehydrogenase, middle domain AACT_0095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACT_0096 PF13183 4Fe-4S dicluster domain AACT_0096 PF02754 Cysteine-rich domain AACT_0096 PF02665 Nitrate reductase gamma subunit AACT_0097 PF01012 Electron transfer flavoprotein domain AACT_0098 PF00766 Electron transfer flavoprotein FAD-binding domain AACT_0098 PF01012 Electron transfer flavoprotein domain AACT_0099 PF05724 Thiopurine S-methyltransferase (TPMT) AACT_0100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AACT_0100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AACT_0101 PF03061 Thioesterase superfamily AACT_0102 PF03061 Thioesterase superfamily AACT_0103 PF01144 Coenzyme A transferase AACT_0104 PF01144 Coenzyme A transferase AACT_0105 PF00108 Thiolase, N-terminal domain AACT_0105 PF02803 Thiolase, C-terminal domain AACT_0106 PF08447 PAS fold AACT_0106 PF08448 PAS fold AACT_0106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0107 PF00486 Transcriptional regulatory protein, C terminal AACT_0107 PF00072 Response regulator receiver domain AACT_0108 PF00072 Response regulator receiver domain AACT_0108 PF00486 Transcriptional regulatory protein, C terminal AACT_0109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0109 PF00512 His Kinase A (phospho-acceptor) domain AACT_0109 PF00989 PAS fold AACT_0109 PF13188 PAS domain AACT_0109 PF13426 PAS domain AACT_0110 PF02589 LUD domain AACT_0111 PF02589 LUD domain AACT_0111 PF11870 Domain of unknown function (DUF3390) AACT_0111 PF13183 4Fe-4S dicluster domain AACT_0112 PF02754 Cysteine-rich domain AACT_0114 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AACT_0114 PF01872 RibD C-terminal domain AACT_0115 PF00364 Biotin-requiring enzyme AACT_0116 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AACT_0116 PF00289 Biotin carboxylase, N-terminal domain AACT_0116 PF02785 Biotin carboxylase C-terminal domain AACT_0117 PF00271 Helicase conserved C-terminal domain AACT_0117 PF00270 DEAD/DEAH box helicase AACT_0118 PF01384 Phosphate transporter family AACT_0120 PF00733 Asparagine synthase AACT_0120 PF13537 Glutamine amidotransferase domain AACT_0122 PF00881 Nitroreductase family AACT_0123 PF03480 Bacterial extracellular solute-binding protein, family 7 AACT_0124 PF13085 2Fe-2S iron-sulfur cluster binding domain AACT_0124 PF13183 4Fe-4S dicluster domain AACT_0125 PF00890 FAD binding domain AACT_0125 PF02910 Fumarate reductase flavoprotein C-term AACT_0127 PF02562 PhoH-like protein AACT_0127 PF13638 PIN domain AACT_0128 PF03653 Uncharacterised protein family (UPF0093) AACT_0129 PF01661 Macro domain AACT_0129 PF16193 AAA C-terminal domain AACT_0129 PF05496 Holliday junction DNA helicase RuvB P-loop domain AACT_0129 PF12002 MgsA AAA+ ATPase C terminal AACT_0130 PF00849 RNA pseudouridylate synthase AACT_0130 PF01479 S4 domain AACT_0131 PF00571 CBS domain AACT_0131 PF01380 SIS domain AACT_0132 PF00753 Metallo-beta-lactamase superfamily AACT_0132 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AACT_0132 PF17770 Ribonuclease J C-terminal domain AACT_0133 PF00398 Ribosomal RNA adenine dimethylase AACT_0134 PF00977 Histidine biosynthesis protein AACT_0137 PF04055 Radical SAM superfamily AACT_0138 PF00749 tRNA synthetases class I (E and Q), catalytic domain AACT_0139 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AACT_0140 PF00072 Response regulator receiver domain AACT_0140 PF00486 Transcriptional regulatory protein, C terminal AACT_0141 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0145 PF00873 AcrB/AcrD/AcrF family AACT_0146 PF04264 YceI-like domain AACT_0148 PF05114 Protein of unknown function (DUF692) AACT_0150 PF01554 MatE AACT_0151 PF01842 ACT domain AACT_0151 PF03447 Homoserine dehydrogenase, NAD binding domain AACT_0151 PF00742 Homoserine dehydrogenase AACT_0152 PF00155 Aminotransferase class I and II AACT_0154 PF00588 SpoU rRNA Methylase family AACT_0154 PF08032 RNA 2'-O ribose methyltransferase substrate binding AACT_0156 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AACT_0157 PF01197 Ribosomal protein L31 AACT_0161 PF00990 Diguanylate cyclase, GGDEF domain AACT_0163 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AACT_0163 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AACT_0164 PF00586 AIR synthase related protein, N-terminal domain AACT_0164 PF02769 AIR synthase related protein, C-terminal domain AACT_0165 PF17284 Spermidine synthase tetramerisation domain AACT_0166 PF01121 Dephospho-CoA kinase AACT_0167 PF01678 Diaminopimelate epimerase AACT_0168 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AACT_0169 PF02222 ATP-grasp domain AACT_0171 PF04264 YceI-like domain AACT_0173 PF00266 Aminotransferase class-V AACT_0174 PF13393 Histidyl-tRNA synthetase AACT_0175 PF00709 Adenylosuccinate synthetase AACT_0177 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AACT_0177 PF00117 Glutamine amidotransferase class-I AACT_0178 PF04608 Phosphatidylglycerophosphatase A AACT_0180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AACT_0180 PF02542 YgbB family AACT_0182 PF10609 NUBPL iron-transfer P-loop NTPase AACT_0182 PF01883 Iron-sulfur cluster assembly protein AACT_0183 PF01502 Phosphoribosyl-AMP cyclohydrolase AACT_0183 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AACT_0186 PF01063 Amino-transferase class IV AACT_0188 PF00925 GTP cyclohydrolase II AACT_0190 PF02310 B12 binding domain AACT_0190 PF02607 B12 binding domain AACT_0190 PF02965 Vitamin B12 dependent methionine synthase, activation domain AACT_0190 PF02574 Homocysteine S-methyltransferase AACT_0190 PF00809 Pterin binding enzyme AACT_0199 PF06803 Protein of unknown function (DUF1232) AACT_0206 PF09997 Predicted membrane protein (DUF2238) AACT_0207 PF00465 Iron-containing alcohol dehydrogenase AACT_0213 PF02664 S-Ribosylhomocysteinase (LuxS) AACT_0214 PF04397 LytTr DNA-binding domain AACT_0214 PF00072 Response regulator receiver domain AACT_0215 PF00857 Isochorismatase family AACT_0222 PF02405 Permease MlaE AACT_0223 PF00005 ABC transporter AACT_0226 PF07273 Protein of unknown function (DUF1439) AACT_0227 PF05145 Transition state regulatory protein AbrB AACT_0228 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AACT_0228 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AACT_0228 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AACT_0228 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AACT_0229 PF08448 PAS fold AACT_0229 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0229 PF08447 PAS fold AACT_0230 PF00486 Transcriptional regulatory protein, C terminal AACT_0230 PF00072 Response regulator receiver domain AACT_0230 PF01627 Hpt domain AACT_0231 PF01970 Tripartite tricarboxylate transporter TctA family AACT_0234 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AACT_0235 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AACT_0235 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AACT_0237 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AACT_0238 PF13419 Haloacid dehalogenase-like hydrolase AACT_0239 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AACT_0240 PF00380 Ribosomal protein S9/S16 AACT_0241 PF00572 Ribosomal protein L13 AACT_0242 PF00672 HAMP domain AACT_0242 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0242 PF00512 His Kinase A (phospho-acceptor) domain AACT_0243 PF00486 Transcriptional regulatory protein, C terminal AACT_0243 PF00072 Response regulator receiver domain AACT_0245 PF01895 PhoU domain AACT_0246 PF00005 ABC transporter AACT_0247 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0248 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0249 PF00989 PAS fold AACT_0249 PF00563 EAL domain AACT_0249 PF01590 GAF domain AACT_0249 PF00990 Diguanylate cyclase, GGDEF domain AACT_0250 PF12849 PBP superfamily domain AACT_0252 PF03462 PCRF domain AACT_0252 PF00472 RF-1 domain AACT_0253 PF01649 Ribosomal protein S20 AACT_0254 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AACT_0254 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AACT_0254 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AACT_0254 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AACT_0255 PF01252 Signal peptidase (SPase) II AACT_0256 PF00330 Aconitase family (aconitate hydratase) AACT_0257 PF12804 MobA-like NTP transferase domain AACT_0258 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_0260 PF00453 Ribosomal protein L20 AACT_0261 PF01632 Ribosomal protein L35 AACT_0262 PF05198 Translation initiation factor IF-3, N-terminal domain AACT_0262 PF00707 Translation initiation factor IF-3, C-terminal domain AACT_0263 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AACT_0263 PF03129 Anticodon binding domain AACT_0263 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AACT_0270 PF03652 Holliday junction resolvase AACT_0271 PF01648 4'-phosphopantetheinyl transferase superfamily AACT_0272 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AACT_0272 PF01266 FAD dependent oxidoreductase AACT_0273 PF00005 ABC transporter AACT_0273 PF17912 MalK OB fold domain AACT_0274 PF00005 ABC transporter AACT_0274 PF08402 TOBE domain AACT_0276 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0279 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AACT_0279 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AACT_0282 PF00392 Bacterial regulatory proteins, gntR family AACT_0282 PF07702 UTRA domain AACT_0285 PF00391 PEP-utilising enzyme, mobile domain AACT_0285 PF00224 Pyruvate kinase, barrel domain AACT_0285 PF02887 Pyruvate kinase, alpha/beta domain AACT_0286 PF00171 Aldehyde dehydrogenase family AACT_0287 PF00342 Phosphoglucose isomerase AACT_0288 PF01081 KDPG and KHG aldolase AACT_0289 PF00920 Dehydratase family AACT_0290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AACT_0295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AACT_0295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AACT_0295 PF13288 DXP reductoisomerase C-terminal domain AACT_0299 PF00814 Glycoprotease family AACT_0300 PF01253 Translation initiation factor SUI1 AACT_0303 PF01256 Carbohydrate kinase AACT_0303 PF03853 YjeF-related protein N-terminus AACT_0304 PF05690 Thiazole biosynthesis protein ThiG AACT_0311 PF00005 ABC transporter AACT_0311 PF09383 NIL domain AACT_0312 PF02653 Branched-chain amino acid transport system / permease component AACT_0323 PF01553 Acyltransferase AACT_0323 PF00501 AMP-binding enzyme AACT_0325 PF03707 Bacterial signalling protein N terminal repeat AACT_0325 PF00563 EAL domain AACT_0325 PF00990 Diguanylate cyclase, GGDEF domain AACT_0326 PF01339 CheB methylesterase AACT_0326 PF01739 CheR methyltransferase, SAM binding domain AACT_0326 PF03705 CheR methyltransferase, all-alpha domain AACT_0326 PF08448 PAS fold AACT_0328 PF01740 STAS domain AACT_0328 PF00916 Sulfate permease family AACT_0333 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AACT_0336 PF02374 Anion-transporting ATPase AACT_0337 PF06953 Arsenical resistance operon trans-acting repressor ArsD AACT_0338 PF01451 Low molecular weight phosphotyrosine protein phosphatase AACT_0340 PF02040 Arsenical pump membrane protein AACT_0342 PF01022 Bacterial regulatory protein, arsR family AACT_0343 PF04172 LrgB-like family AACT_0345 PF00072 Response regulator receiver domain AACT_0345 PF00990 Diguanylate cyclase, GGDEF domain AACT_0346 PF00117 Glutamine amidotransferase class-I AACT_0346 PF00958 GMP synthase C terminal domain AACT_0346 PF02540 NAD synthase AACT_0348 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AACT_0348 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AACT_0349 PF02779 Transketolase, pyrimidine binding domain AACT_0349 PF00456 Transketolase, thiamine diphosphate binding domain AACT_0349 PF02780 Transketolase, C-terminal domain AACT_0361 PF01699 Sodium/calcium exchanger protein AACT_0363 PF04277 Oxaloacetate decarboxylase, gamma chain AACT_0364 PF00364 Biotin-requiring enzyme AACT_0365 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AACT_0366 PF00563 EAL domain AACT_0366 PF00990 Diguanylate cyclase, GGDEF domain AACT_0366 PF03707 Bacterial signalling protein N terminal repeat AACT_0368 PF01966 HD domain AACT_0368 PF08335 GlnD PII-uridylyltransferase AACT_0368 PF01909 Nucleotidyltransferase domain AACT_0370 PF08447 PAS fold AACT_0370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0370 PF08448 PAS fold AACT_0375 PF00909 Ammonium Transporter Family AACT_0376 PF00543 Nitrogen regulatory protein P-II AACT_0377 PF00909 Ammonium Transporter Family AACT_0378 PF00543 Nitrogen regulatory protein P-II AACT_0380 PF02154 Flagellar motor switch protein FliM AACT_0380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AACT_0381 PF02119 Flagellar P-ring protein AACT_0383 PF01313 Bacterial export proteins, family 3 AACT_0389 PF02107 Flagellar L-ring protein AACT_0390 PF02561 Flagellar protein FliS AACT_0392 PF01171 PP-loop family AACT_0393 PF04055 Radical SAM superfamily AACT_0393 PF18693 TRAM domain AACT_0393 PF00919 Uncharacterized protein family UPF0004 AACT_0394 PF02569 Pantoate-beta-alanine ligase AACT_0395 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0396 PF01648 4'-phosphopantetheinyl transferase superfamily AACT_0397 PF03652 Holliday junction resolvase AACT_0400 PF00923 Transaldolase/Fructose-6-phosphate aldolase AACT_0401 PF01474 Class-II DAHP synthetase family AACT_0402 PF03960 ArsC family AACT_0403 PF02686 Glu-tRNAGln amidotransferase C subunit AACT_0404 PF01702 Queuine tRNA-ribosyltransferase AACT_0407 PF08448 PAS fold AACT_0407 PF08447 PAS fold AACT_0407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0409 PF00155 Aminotransferase class I and II AACT_0411 PF02875 Mur ligase family, glutamate ligase domain AACT_0411 PF08245 Mur ligase middle domain AACT_0411 PF01225 Mur ligase family, catalytic domain AACT_0412 PF06965 Na+/H+ antiporter 1 AACT_0413 PF02481 DNA recombination-mediator protein A AACT_0413 PF17782 DprA winged helix domain AACT_0414 PF04748 Divergent polysaccharide deacetylase AACT_0415 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AACT_0415 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AACT_0416 PF00773 RNB domain AACT_0417 PF02623 FliW protein AACT_0419 PF01250 Ribosomal protein S6 AACT_0420 PF00436 Single-strand binding protein family AACT_0421 PF01084 Ribosomal protein S18 AACT_0423 PF09190 DALR domain AACT_0423 PF01406 tRNA synthetases class I (C) catalytic domain AACT_0424 PF13184 NusA-like KH domain AACT_0424 PF08529 NusA N-terminal domain AACT_0426 PF04055 Radical SAM superfamily AACT_0426 PF01938 TRAM domain AACT_0426 PF00919 Uncharacterized protein family UPF0004 AACT_0427 PF04028 Domain of unknown function (DUF374) AACT_0429 PF04055 Radical SAM superfamily AACT_0431 PF00484 Carbonic anhydrase AACT_0432 PF00155 Aminotransferase class I and II AACT_0433 PF02021 Uncharacterised protein family UPF0102 AACT_0437 PF00224 Pyruvate kinase, barrel domain AACT_0437 PF02887 Pyruvate kinase, alpha/beta domain AACT_0437 PF00391 PEP-utilising enzyme, mobile domain AACT_0441 PF00486 Transcriptional regulatory protein, C terminal AACT_0441 PF00072 Response regulator receiver domain AACT_0444 PF00202 Aminotransferase class-III AACT_0446 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AACT_0446 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AACT_0447 PF00425 chorismate binding enzyme AACT_0451 PF03591 AzlC protein AACT_0452 PF05437 Branched-chain amino acid transport protein (AzlD) AACT_0453 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AACT_0453 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AACT_0454 PF02504 Fatty acid synthesis protein AACT_0455 PF01783 Ribosomal L32p protein family AACT_0457 PF00334 Nucleoside diphosphate kinase AACT_0458 PF00037 4Fe-4S binding domain AACT_0459 PF10417 C-terminal domain of 1-Cys peroxiredoxin AACT_0459 PF00578 AhpC/TSA family AACT_0460 PF07498 Rho termination factor, N-terminal domain AACT_0460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AACT_0460 PF07497 Rho termination factor, RNA-binding domain AACT_0461 PF00005 ABC transporter AACT_0461 PF09383 NIL domain AACT_0462 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0463 PF03180 NLPA lipoprotein AACT_0464 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AACT_0464 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AACT_0465 PF01177 Asp/Glu/Hydantoin racemase AACT_0466 PF12169 DNA polymerase III subunits gamma and tau domain III AACT_0466 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AACT_0466 PF12170 DNA polymerase III tau subunit V interacting with alpha AACT_0468 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AACT_0468 PF03900 Porphobilinogen deaminase, C-terminal domain AACT_0471 PF04303 PrpF protein AACT_0472 PF00330 Aconitase family (aconitate hydratase) AACT_0472 PF00694 Aconitase C-terminal domain AACT_0473 PF00285 Citrate synthase, C-terminal domain AACT_0476 PF00303 Thymidylate synthase AACT_0477 PF00186 Dihydrofolate reductase AACT_0478 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AACT_0478 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AACT_0484 PF00271 Helicase conserved C-terminal domain AACT_0484 PF00570 HRDC domain AACT_0484 PF16124 RecQ zinc-binding AACT_0484 PF09382 RQC domain AACT_0484 PF00270 DEAD/DEAH box helicase AACT_0489 PF01863 Protein of unknown function DUF45 AACT_0490 PF03831 PhnA domain AACT_0490 PF08274 PhnA Zinc-Ribbon AACT_0493 PF00350 Dynamin family AACT_0494 PF13183 4Fe-4S dicluster domain AACT_0494 PF13085 2Fe-2S iron-sulfur cluster binding domain AACT_0495 PF02910 Fumarate reductase flavoprotein C-term AACT_0495 PF00890 FAD binding domain AACT_0496 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AACT_0497 PF00361 Proton-conducting membrane transporter AACT_0498 PF00361 Proton-conducting membrane transporter AACT_0499 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AACT_0499 PF00361 Proton-conducting membrane transporter AACT_0500 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AACT_0501 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AACT_0502 PF12838 4Fe-4S dicluster domain AACT_0503 PF00146 NADH dehydrogenase AACT_0504 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AACT_0504 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AACT_0504 PF00384 Molybdopterin oxidoreductase AACT_0505 PF00285 Citrate synthase, C-terminal domain AACT_0506 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AACT_0506 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AACT_0506 PF10531 SLBB domain AACT_0508 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AACT_0508 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AACT_0509 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AACT_0510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AACT_0511 PF00155 Aminotransferase class I and II AACT_0512 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AACT_0513 PF12821 Threonine/Serine exporter, ThrE AACT_0514 PF06738 Putative threonine/serine exporter AACT_0514 PF12821 Threonine/Serine exporter, ThrE AACT_0516 PF03309 Type III pantothenate kinase AACT_0517 PF01634 ATP phosphoribosyltransferase AACT_0520 PF00579 tRNA synthetases class I (W and Y) AACT_0522 PF01545 Cation efflux family AACT_0522 PF16916 Dimerisation domain of Zinc Transporter AACT_0524 PF02403 Seryl-tRNA synthetase N-terminal domain AACT_0524 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AACT_0528 PF01883 Iron-sulfur cluster assembly protein AACT_0531 PF01810 LysE type translocator AACT_0532 PF00005 ABC transporter AACT_0533 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0534 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0535 PF00497 Bacterial extracellular solute-binding proteins, family 3 AACT_0536 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_0536 PF08447 PAS fold AACT_0540 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AACT_0541 PF00037 4Fe-4S binding domain AACT_0541 PF12801 4Fe-4S binding domain AACT_0542 PF12800 4Fe-4S binding domain AACT_0542 PF12838 4Fe-4S dicluster domain AACT_0543 PF01568 Molydopterin dinucleotide binding domain AACT_0543 PF00384 Molybdopterin oxidoreductase AACT_0543 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AACT_0544 PF02885 Glycosyl transferase family, helical bundle domain AACT_0544 PF00591 Glycosyl transferase family, a/b domain AACT_0546 PF17805 AsnC-like ligand binding domain AACT_0549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0549 PF08447 PAS fold AACT_0549 PF08448 PAS fold AACT_0550 PF14824 Sirohaem biosynthesis protein central AACT_0550 PF10414 Sirohaem synthase dimerisation region AACT_0550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AACT_0552 PF04055 Radical SAM superfamily AACT_0552 PF13186 Iron-sulfur cluster-binding domain AACT_0559 PF00115 Cytochrome C and Quinol oxidase polypeptide I AACT_0560 PF00034 Cytochrome c AACT_0564 PF02885 Glycosyl transferase family, helical bundle domain AACT_0564 PF00591 Glycosyl transferase family, a/b domain AACT_0565 PF06463 Molybdenum Cofactor Synthesis C AACT_0565 PF04055 Radical SAM superfamily AACT_0568 PF02222 ATP-grasp domain AACT_0568 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AACT_0569 PF00731 AIR carboxylase AACT_0570 PF00312 Ribosomal protein S15 AACT_0575 PF13380 CoA binding domain AACT_0576 PF08521 Two-component sensor kinase N-terminal AACT_0576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0576 PF00512 His Kinase A (phospho-acceptor) domain AACT_0577 PF00072 Response regulator receiver domain AACT_0577 PF00486 Transcriptional regulatory protein, C terminal AACT_0578 PF00639 PPIC-type PPIASE domain AACT_0579 PF01116 Fructose-bisphosphate aldolase class-II AACT_0580 PF00883 Cytosol aminopeptidase family, catalytic domain AACT_0584 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AACT_0586 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0587 PF00005 ABC transporter AACT_0591 PF01850 PIN domain AACT_0593 PF00296 Luciferase-like monooxygenase AACT_0594 PF06719 AraC-type transcriptional regulator N-terminus AACT_0594 PF12833 Helix-turn-helix domain AACT_0595 PF00106 short chain dehydrogenase AACT_0599 PF00005 ABC transporter AACT_0599 PF08402 TOBE domain AACT_0601 PF01011 PQQ enzyme repeat AACT_0601 PF13360 PQQ-like domain AACT_0603 PF12706 Beta-lactamase superfamily domain AACT_0604 PF03070 TENA/THI-4/PQQC family AACT_0605 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AACT_0606 PF04055 Radical SAM superfamily AACT_0606 PF13186 Iron-sulfur cluster-binding domain AACT_0607 PF01810 LysE type translocator AACT_0609 PF00072 Response regulator receiver domain AACT_0609 PF00486 Transcriptional regulatory protein, C terminal AACT_0610 PF09456 RcsC Alpha-Beta-Loop (ABL) AACT_0610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0610 PF00512 His Kinase A (phospho-acceptor) domain AACT_0610 PF00072 Response regulator receiver domain AACT_0611 PF00171 Aldehyde dehydrogenase family AACT_0613 PF00313 'Cold-shock' DNA-binding domain AACT_0614 PF02472 Biopolymer transport protein ExbD/TolR AACT_0615 PF01618 MotA/TolQ/ExbB proton channel family AACT_0620 PF01202 Shikimate kinase AACT_0621 PF00815 Histidinol dehydrogenase AACT_0623 PF00348 Polyprenyl synthetase AACT_0624 PF01488 Shikimate / quinate 5-dehydrogenase AACT_0624 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AACT_0624 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AACT_0625 PF03129 Anticodon binding domain AACT_0625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AACT_0625 PF04073 Aminoacyl-tRNA editing domain AACT_0626 PF00924 Mechanosensitive ion channel AACT_0626 PF05552 Conserved TM helix AACT_0627 PF12627 Probable RNA and SrmB- binding site of polymerase A AACT_0627 PF01966 HD domain AACT_0627 PF01743 Poly A polymerase head domain AACT_0631 PF02699 Preprotein translocase subunit AACT_0632 PF02355 Protein export membrane protein AACT_0633 PF02355 Protein export membrane protein AACT_0633 PF07549 SecD/SecF GG Motif AACT_0637 PF13603 Leucyl-tRNA synthetase, Domain 2 AACT_0637 PF00133 tRNA synthetases class I (I, L, M and V) AACT_0637 PF09334 tRNA synthetases class I (M) AACT_0639 PF08245 Mur ligase middle domain AACT_0641 PF00999 Sodium/hydrogen exchanger family AACT_0641 PF02254 TrkA-N domain AACT_0642 PF00072 Response regulator receiver domain AACT_0643 PF00672 HAMP domain AACT_0643 PF00512 His Kinase A (phospho-acceptor) domain AACT_0643 PF01627 Hpt domain AACT_0643 PF00072 Response regulator receiver domain AACT_0643 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AACT_0643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0644 PF00512 His Kinase A (phospho-acceptor) domain AACT_0644 PF09308 LuxQ, periplasmic AACT_0644 PF00072 Response regulator receiver domain AACT_0646 PF02472 Biopolymer transport protein ExbD/TolR AACT_0647 PF01618 MotA/TolQ/ExbB proton channel family AACT_0653 PF00005 ABC transporter AACT_0653 PF02687 FtsX-like permease family AACT_0653 PF12704 MacB-like periplasmic core domain AACT_0654 PF00005 ABC transporter AACT_0654 PF02687 FtsX-like permease family AACT_0654 PF12704 MacB-like periplasmic core domain AACT_0665 PF00005 ABC transporter AACT_0666 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0667 PF13545 Crp-like helix-turn-helix domain AACT_0667 PF00027 Cyclic nucleotide-binding domain AACT_0676 PF00271 Helicase conserved C-terminal domain AACT_0676 PF17757 UvrB interaction domain AACT_0676 PF03461 TRCF domain AACT_0676 PF02559 CarD-like/TRCF domain AACT_0676 PF00270 DEAD/DEAH box helicase AACT_0678 PF01590 GAF domain AACT_0678 PF00360 Phytochrome region AACT_0678 PF00990 Diguanylate cyclase, GGDEF domain AACT_0678 PF00563 EAL domain AACT_0680 PF00486 Transcriptional regulatory protein, C terminal AACT_0680 PF00072 Response regulator receiver domain AACT_0683 PF13277 YmdB-like protein AACT_0686 PF01209 ubiE/COQ5 methyltransferase family AACT_0687 PF13742 OB-fold nucleic acid binding domain AACT_0687 PF02601 Exonuclease VII, large subunit AACT_0688 PF01584 CheW-like domain AACT_0689 PF00486 Transcriptional regulatory protein, C terminal AACT_0689 PF00072 Response regulator receiver domain AACT_0691 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AACT_0693 PF02261 Aspartate decarboxylase AACT_0694 PF02575 YbaB/EbfC DNA-binding family AACT_0695 PF00348 Polyprenyl synthetase AACT_0696 PF00166 Chaperonin 10 Kd subunit AACT_0697 PF00118 TCP-1/cpn60 chaperonin family AACT_0698 PF00672 HAMP domain AACT_0698 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0698 PF00512 His Kinase A (phospho-acceptor) domain AACT_0699 PF00486 Transcriptional regulatory protein, C terminal AACT_0699 PF00072 Response regulator receiver domain AACT_0700 PF00149 Calcineurin-like phosphoesterase AACT_0702 PF04264 YceI-like domain AACT_0705 PF00005 ABC transporter AACT_0707 PF11849 Domain of unknown function (DUF3369) AACT_0708 PF00459 Inositol monophosphatase family AACT_0709 PF01380 SIS domain AACT_0712 PF00892 EamA-like transporter family AACT_0713 PF02773 S-adenosylmethionine synthetase, C-terminal domain AACT_0713 PF02772 S-adenosylmethionine synthetase, central domain AACT_0713 PF00438 S-adenosylmethionine synthetase, N-terminal domain AACT_0714 PF01039 Carboxyl transferase domain AACT_0714 PF17848 Acetyl-coA carboxylase zinc finger domain AACT_0715 PF02581 Thiamine monophosphate synthase AACT_0716 PF02590 Predicted SPOUT methyltransferase AACT_0718 PF01207 Dihydrouridine synthase (Dus) AACT_0720 PF00004 ATPase family associated with various cellular activities (AAA) AACT_0720 PF17862 AAA+ lid domain AACT_0720 PF01434 Peptidase family M41 AACT_0721 PF00682 HMGL-like AACT_0721 PF08502 LeuA allosteric (dimerisation) domain AACT_0722 PF07556 Protein of unknown function (DUF1538) AACT_0725 PF05192 MutS domain III AACT_0725 PF00488 MutS domain V AACT_0725 PF01624 MutS domain I AACT_0725 PF05188 MutS domain II AACT_0725 PF05190 MutS family domain IV AACT_0728 PF00977 Histidine biosynthesis protein AACT_0729 PF08338 Domain of unknown function (DUF1731) AACT_0729 PF01370 NAD dependent epimerase/dehydratase family AACT_0730 PF00117 Glutamine amidotransferase class-I AACT_0732 PF00679 Elongation factor G C-terminus AACT_0732 PF00009 Elongation factor Tu GTP binding domain AACT_0732 PF03144 Elongation factor Tu domain 2 AACT_0732 PF06421 GTP-binding protein LepA C-terminus AACT_0733 PF05736 OprF membrane domain AACT_0733 PF00691 OmpA family AACT_0734 PF00691 OmpA family AACT_0734 PF05736 OprF membrane domain AACT_0735 PF14572 Phosphoribosyl synthetase-associated domain AACT_0735 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AACT_0739 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AACT_0740 PF01321 Creatinase/Prolidase N-terminal domain AACT_0740 PF00557 Metallopeptidase family M24 AACT_0741 PF01220 Dehydroquinase class II AACT_0742 PF01979 Amidohydrolase family AACT_0743 PF01343 Peptidase family S49 AACT_0744 PF00871 Acetokinase family AACT_0745 PF01515 Phosphate acetyl/butaryl transferase AACT_0746 PF00871 Acetokinase family AACT_0747 PF14480 DNA polymerase III polC-type N-terminus I AACT_0747 PF11490 DNA polymerase III polC-type N-terminus II AACT_0747 PF07733 Bacterial DNA polymerase III alpha NTPase domain AACT_0747 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AACT_0747 PF14579 Helix-hairpin-helix motif AACT_0747 PF02811 PHP domain AACT_0747 PF00929 Exonuclease AACT_0749 PF00474 Sodium:solute symporter family AACT_0751 PF00474 Sodium:solute symporter family AACT_0753 PF00929 Exonuclease AACT_0755 PF00474 Sodium:solute symporter family AACT_0757 PF00072 Response regulator receiver domain AACT_0757 PF00486 Transcriptional regulatory protein, C terminal AACT_0758 PF00672 HAMP domain AACT_0758 PF00512 His Kinase A (phospho-acceptor) domain AACT_0758 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0758 PF13426 PAS domain AACT_0767 PF18146 Damage-inducible protein CinA KH domain AACT_0767 PF00994 Probable molybdopterin binding domain AACT_0767 PF02464 Competence-damaged protein AACT_0768 PF06039 Malate:quinone oxidoreductase (Mqo) AACT_0769 PF00133 tRNA synthetases class I (I, L, M and V) AACT_0769 PF08264 Anticodon-binding domain of tRNA AACT_0772 PF02875 Mur ligase family, glutamate ligase domain AACT_0772 PF08245 Mur ligase middle domain AACT_0774 PF00497 Bacterial extracellular solute-binding proteins, family 3 AACT_0774 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0774 PF00512 His Kinase A (phospho-acceptor) domain AACT_0777 PF01882 Protein of unknown function DUF58 AACT_0778 PF17863 AAA lid domain AACT_0778 PF07726 ATPase family associated with various cellular activities (AAA) AACT_0779 PF00318 Ribosomal protein S2 AACT_0780 PF00889 Elongation factor TS AACT_0781 PF00005 ABC transporter AACT_0783 PF00625 Guanylate kinase AACT_0784 PF00563 EAL domain AACT_0784 PF00990 Diguanylate cyclase, GGDEF domain AACT_0784 PF08448 PAS fold AACT_0785 PF00403 Heavy-metal-associated domain AACT_0788 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AACT_0788 PF00005 ABC transporter AACT_0789 PF00762 Ferrochelatase AACT_0791 PF01875 Memo-like protein AACT_0792 PF02698 DUF218 domain AACT_0793 PF00005 ABC transporter AACT_0794 PF00950 ABC 3 transport family AACT_0797 PF17783 CvfB-like winged helix domain AACT_0797 PF13509 S1 domain AACT_0798 PF08534 Redoxin AACT_0799 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AACT_0799 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AACT_0802 PF00174 Oxidoreductase molybdopterin binding domain AACT_0803 PF01794 Ferric reductase like transmembrane component AACT_0804 PF00909 Ammonium Transporter Family AACT_0805 PF00543 Nitrogen regulatory protein P-II AACT_0806 PF05230 MASE2 domain AACT_0806 PF00990 Diguanylate cyclase, GGDEF domain AACT_0807 PF00580 UvrD/REP helicase N-terminal domain AACT_0807 PF13361 UvrD-like helicase C-terminal domain AACT_0808 PF02080 TrkA-C domain AACT_0808 PF02254 TrkA-N domain AACT_0808 PF00999 Sodium/hydrogen exchanger family AACT_0809 PF00174 Oxidoreductase molybdopterin binding domain AACT_0823 PF01614 Bacterial transcriptional regulator AACT_0823 PF09339 IclR helix-turn-helix domain AACT_0824 PF01965 DJ-1/PfpI family AACT_0830 PF00133 tRNA synthetases class I (I, L, M and V) AACT_0830 PF08264 Anticodon-binding domain of tRNA AACT_0830 PF10458 Valyl tRNA synthetase tRNA binding arm AACT_0834 PF00194 Eukaryotic-type carbonic anhydrase AACT_0837 PF00873 AcrB/AcrD/AcrF family AACT_0839 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AACT_0839 PF00072 Response regulator receiver domain AACT_0839 PF01627 Hpt domain AACT_0839 PF00512 His Kinase A (phospho-acceptor) domain AACT_0839 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_0839 PF00672 HAMP domain AACT_0842 PF07690 Major Facilitator Superfamily AACT_0843 PF01725 Ham1 family AACT_0847 PF03807 NADP oxidoreductase coenzyme F420-dependent AACT_0847 PF14748 Pyrroline-5-carboxylate reductase dimerisation AACT_0849 PF13525 Outer membrane lipoprotein AACT_0850 PF02190 ATP-dependent protease La (LON) substrate-binding domain AACT_0850 PF05362 Lon protease (S16) C-terminal proteolytic domain AACT_0850 PF00004 ATPase family associated with various cellular activities (AAA) AACT_0854 PF01451 Low molecular weight phosphotyrosine protein phosphatase AACT_0856 PF00990 Diguanylate cyclase, GGDEF domain AACT_0856 PF00563 EAL domain AACT_0856 PF08448 PAS fold AACT_0856 PF13426 PAS domain AACT_0856 PF08447 PAS fold AACT_0856 PF05231 MASE1 AACT_0858 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_0858 PF08447 PAS fold AACT_0858 PF13426 PAS domain AACT_0859 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AACT_0861 PF16295 Tetracyclin repressor-like, C-terminal domain AACT_0861 PF00440 Bacterial regulatory proteins, tetR family AACT_0864 PF13533 Biotin-lipoyl like AACT_0865 PF00873 AcrB/AcrD/AcrF family AACT_0866 PF00892 EamA-like transporter family AACT_0868 PF02785 Biotin carboxylase C-terminal domain AACT_0868 PF00289 Biotin carboxylase, N-terminal domain AACT_0868 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AACT_0871 PF02657 Fe-S metabolism associated domain AACT_0872 PF00266 Aminotransferase class-V AACT_0874 PF00005 ABC transporter AACT_0875 PF01458 Uncharacterized protein family (UPF0051) AACT_0878 PF13426 PAS domain AACT_0878 PF01740 STAS domain AACT_0879 PF00528 Binding-protein-dependent transport system inner membrane component AACT_0880 PF00497 Bacterial extracellular solute-binding proteins, family 3 AACT_0881 PF00266 Aminotransferase class-V AACT_0882 PF01106 NifU-like domain AACT_0882 PF04324 BFD-like [2Fe-2S] binding domain AACT_0882 PF01592 NifU-like N terminal domain AACT_0885 PF00571 CBS domain AACT_0885 PF03448 MgtE intracellular N domain AACT_0885 PF01769 Divalent cation transporter AACT_0886 PF01925 Sulfite exporter TauE/SafE AACT_0887 PF00990 Diguanylate cyclase, GGDEF domain AACT_0891 PF00206 Lyase AACT_0891 PF14698 Argininosuccinate lyase C-terminal AACT_0892 PF00072 Response regulator receiver domain AACT_0892 PF01584 CheW-like domain AACT_0893 PF00899 ThiF family AACT_0894 PF03449 Transcription elongation factor, N-terminal AACT_0894 PF01272 Transcription elongation factor, GreA/GreB, C-term AACT_0895 PF02774 Semialdehyde dehydrogenase, dimerisation domain AACT_0895 PF01118 Semialdehyde dehydrogenase, NAD binding domain AACT_0898 PF00271 Helicase conserved C-terminal domain AACT_0898 PF04851 Type III restriction enzyme, res subunit AACT_0898 PF02151 UvrB/uvrC motif AACT_0898 PF12344 Ultra-violet resistance protein B AACT_0898 PF17757 UvrB interaction domain AACT_0899 PF10576 Iron-sulfur binding domain of endonuclease III AACT_0899 PF00633 Helix-hairpin-helix motif AACT_0899 PF00730 HhH-GPD superfamily base excision DNA repair protein AACT_0901 PF01266 FAD dependent oxidoreductase AACT_0901 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AACT_0902 PF07715 TonB-dependent Receptor Plug Domain AACT_0902 PF00593 TonB dependent receptor AACT_0908 PF02502 Ribose/Galactose Isomerase AACT_0909 PF10502 Signal peptidase, peptidase S26 AACT_0910 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AACT_0910 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AACT_0913 PF01386 Ribosomal L25p family AACT_0913 PF14693 Ribosomal protein TL5, C-terminal domain AACT_0914 PF01195 Peptidyl-tRNA hydrolase AACT_0917 PF01520 N-acetylmuramoyl-L-alanine amidase AACT_0919 PF01479 S4 domain AACT_0919 PF00579 tRNA synthetases class I (W and Y) AACT_0920 PF02824 TGS domain AACT_0920 PF04607 Region found in RelA / SpoT proteins AACT_0920 PF13291 ACT domain AACT_0921 PF01192 RNA polymerase Rpb6 AACT_0922 PF00696 Amino acid kinase family AACT_0924 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AACT_0925 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AACT_0926 PF04715 Anthranilate synthase component I, N terminal region AACT_0926 PF00425 chorismate binding enzyme AACT_0928 PF00464 Serine hydroxymethyltransferase AACT_0929 PF00152 tRNA synthetases class II (D, K and N) AACT_0929 PF01336 OB-fold nucleic acid binding domain AACT_0931 PF04551 GcpE protein AACT_0932 PF03796 DnaB-like helicase C terminal domain AACT_0932 PF00772 DnaB-like helicase N terminal domain AACT_0938 PF01609 Transposase DDE domain AACT_0939 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AACT_0941 PF04321 RmlD substrate binding domain AACT_0944 PF01695 IstB-like ATP binding protein AACT_0946 PF16363 GDP-mannose 4,6 dehydratase AACT_0948 PF16363 GDP-mannose 4,6 dehydratase AACT_0949 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AACT_0949 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AACT_0949 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AACT_0950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AACT_0950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AACT_0951 PF00132 Bacterial transferase hexapeptide (six repeats) AACT_0952 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AACT_0956 PF13439 Glycosyltransferase Family 4 AACT_0957 PF02350 UDP-N-acetylglucosamine 2-epimerase AACT_0962 PF01850 PIN domain AACT_0963 PF00953 Glycosyl transferase family 4 AACT_0965 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AACT_0966 PF02719 Polysaccharide biosynthesis protein AACT_0969 PF01068 ATP dependent DNA ligase domain AACT_0969 PF14743 DNA ligase OB-like domain AACT_0970 PF00156 Phosphoribosyl transferase domain AACT_0971 PF00291 Pyridoxal-phosphate dependent enzyme AACT_0973 PF02789 Cytosol aminopeptidase family, N-terminal domain AACT_0973 PF00883 Cytosol aminopeptidase family, catalytic domain AACT_0975 PF06071 Protein of unknown function (DUF933) AACT_0975 PF01926 50S ribosome-binding GTPase AACT_0979 PF06865 Pyrimidine/purine nucleoside phosphorylase AACT_0984 PF01142 tRNA pseudouridine synthase D (TruD) AACT_0986 PF00672 HAMP domain AACT_0986 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_0986 PF02203 Tar ligand binding domain homologue AACT_0987 PF01330 RuvA N terminal domain AACT_0987 PF07499 RuvA, C-terminal domain AACT_0988 PF01820 D-ala D-ala ligase N-terminus AACT_0988 PF07478 D-ala D-ala ligase C-terminus AACT_0990 PF01225 Mur ligase family, catalytic domain AACT_0990 PF02875 Mur ligase family, glutamate ligase domain AACT_0990 PF08245 Mur ligase middle domain AACT_0991 PF01230 HIT domain AACT_0993 PF02954 Bacterial regulatory protein, Fis family AACT_0993 PF00158 Sigma-54 interaction domain AACT_0995 PF00338 Ribosomal protein S10p/S20e AACT_0996 PF00297 Ribosomal protein L3 AACT_0997 PF00573 Ribosomal protein L4/L1 family AACT_0998 PF00276 Ribosomal protein L23 AACT_0999 PF00181 Ribosomal Proteins L2, RNA binding domain AACT_0999 PF03947 Ribosomal Proteins L2, C-terminal domain AACT_1000 PF00203 Ribosomal protein S19 AACT_1001 PF00237 Ribosomal protein L22p/L17e AACT_1002 PF07650 KH domain AACT_1002 PF00189 Ribosomal protein S3, C-terminal domain AACT_1003 PF00252 Ribosomal protein L16p/L10e AACT_1004 PF00831 Ribosomal L29 protein AACT_1005 PF00366 Ribosomal protein S17 AACT_1006 PF00238 Ribosomal protein L14p/L23e AACT_1007 PF00467 KOW motif AACT_1007 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AACT_1008 PF00281 Ribosomal protein L5 AACT_1008 PF00673 ribosomal L5P family C-terminus AACT_1009 PF00253 Ribosomal protein S14p/S29e AACT_1010 PF00410 Ribosomal protein S8 AACT_1011 PF00347 Ribosomal protein L6 AACT_1012 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AACT_1013 PF03719 Ribosomal protein S5, C-terminal domain AACT_1013 PF00333 Ribosomal protein S5, N-terminal domain AACT_1014 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AACT_1015 PF00344 SecY translocase AACT_1016 PF00557 Metallopeptidase family M24 AACT_1017 PF01176 Translation initiation factor 1A / IF-1 AACT_1019 PF03167 Uracil DNA glycosylase superfamily AACT_1021 PF02938 GAD domain AACT_1021 PF00152 tRNA synthetases class II (D, K and N) AACT_1021 PF01336 OB-fold nucleic acid binding domain AACT_1024 PF04055 Radical SAM superfamily AACT_1024 PF08497 Radical SAM N-terminal AACT_1025 PF05191 Adenylate kinase, active site lid AACT_1029 PF01168 Alanine racemase, N-terminal domain AACT_1029 PF00842 Alanine racemase, C-terminal domain AACT_1030 PF01541 GIY-YIG catalytic domain AACT_1030 PF02151 UvrB/uvrC motif AACT_1030 PF08459 UvrC Helix-hairpin-helix N-terminal AACT_1032 PF00990 Diguanylate cyclase, GGDEF domain AACT_1032 PF17158 Membrane-associated sensor, integral membrane domain AACT_1033 PF00255 Glutathione peroxidase AACT_1034 PF02203 Tar ligand binding domain homologue AACT_1034 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1034 PF00672 HAMP domain AACT_1035 PF00072 Response regulator receiver domain AACT_1035 PF00486 Transcriptional regulatory protein, C terminal AACT_1036 PF00072 Response regulator receiver domain AACT_1037 PF00512 His Kinase A (phospho-acceptor) domain AACT_1037 PF09308 LuxQ, periplasmic AACT_1037 PF00072 Response regulator receiver domain AACT_1037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1038 PF08447 PAS fold AACT_1039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1039 PF02203 Tar ligand binding domain homologue AACT_1039 PF00672 HAMP domain AACT_1042 PF13344 Haloacid dehalogenase-like hydrolase AACT_1042 PF00293 NUDIX domain AACT_1043 PF03976 Polyphosphate kinase 2 (PPK2) AACT_1044 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AACT_1045 PF01850 PIN domain AACT_1049 PF02653 Branched-chain amino acid transport system / permease component AACT_1051 PF12399 Branched-chain amino acid ATP-binding cassette transporter AACT_1051 PF00005 ABC transporter AACT_1052 PF00005 ABC transporter AACT_1053 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AACT_1055 PF01774 UreD urease accessory protein AACT_1056 PF04193 PQ loop repeat AACT_1057 PF00699 Urease beta subunit AACT_1057 PF00547 Urease, gamma subunit AACT_1058 PF01979 Amidohydrolase family AACT_1058 PF00449 Urease alpha-subunit, N-terminal domain AACT_1059 PF05194 UreE urease accessory protein, C-terminal domain AACT_1061 PF02492 CobW/HypB/UreG, nucleotide-binding domain AACT_1065 PF00145 C-5 cytosine-specific DNA methylase AACT_1067 PF13362 Toprim domain AACT_1067 PF18818 Metallopeptidase superfamily domain AACT_1067 PF08401 Domain of unknown function (DUF1738) AACT_1072 PF00176 SNF2 family N-terminal domain AACT_1072 PF00271 Helicase conserved C-terminal domain AACT_1075 PF01555 DNA methylase AACT_1075 PF18273 Type III R-M EcoP15I C-terminal domain AACT_1076 PF08774 VRR-NUC domain AACT_1076 PF04851 Type III restriction enzyme, res subunit AACT_1078 PF03372 Endonuclease/Exonuclease/phosphatase family AACT_1082 PF00583 Acetyltransferase (GNAT) family AACT_1083 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AACT_1084 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AACT_1085 PF13520 Amino acid permease AACT_1088 PF00342 Phosphoglucose isomerase AACT_1089 PF00483 Nucleotidyl transferase AACT_1090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AACT_1090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AACT_1090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AACT_1090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AACT_1097 PF00860 Permease family AACT_1098 PF00156 Phosphoribosyl transferase domain AACT_1100 PF04241 Protein of unknown function (DUF423) AACT_1104 PF00860 Permease family AACT_1105 PF04461 Protein of unknown function (DUF520) AACT_1107 PF00072 Response regulator receiver domain AACT_1107 PF00486 Transcriptional regulatory protein, C terminal AACT_1108 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1109 PF00293 NUDIX domain AACT_1111 PF02253 Phospholipase A1 AACT_1112 PF00834 Ribulose-phosphate 3 epimerase family AACT_1113 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AACT_1114 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AACT_1114 PF11490 DNA polymerase III polC-type N-terminus II AACT_1114 PF14480 DNA polymerase III polC-type N-terminus I AACT_1114 PF02811 PHP domain AACT_1114 PF00929 Exonuclease AACT_1114 PF14579 Helix-hairpin-helix motif AACT_1114 PF07733 Bacterial DNA polymerase III alpha NTPase domain AACT_1115 PF13291 ACT domain AACT_1115 PF04607 Region found in RelA / SpoT proteins AACT_1115 PF02824 TGS domain AACT_1117 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AACT_1118 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AACT_1118 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AACT_1118 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AACT_1120 PF05175 Methyltransferase small domain AACT_1121 PF03692 Putative zinc- or iron-chelating domain AACT_1123 PF00218 Indole-3-glycerol phosphate synthase AACT_1124 PF01361 Tautomerase enzyme AACT_1125 PF01168 Alanine racemase, N-terminal domain AACT_1126 PF17820 PDZ domain AACT_1126 PF02163 Peptidase family M50 AACT_1127 PF01066 CDP-alcohol phosphatidyltransferase AACT_1129 PF00701 Dihydrodipicolinate synthetase family AACT_1132 PF01180 Dihydroorotate dehydrogenase AACT_1133 PF00664 ABC transporter transmembrane region AACT_1133 PF00005 ABC transporter AACT_1134 PF03023 Lipid II flippase MurJ AACT_1136 PF02915 Rubrerythrin AACT_1137 PF02915 Rubrerythrin AACT_1138 PF01609 Transposase DDE domain AACT_1140 PF01699 Sodium/calcium exchanger protein AACT_1141 PF02130 Uncharacterized protein family UPF0054 AACT_1142 PF18073 Rubredoxin metal binding domain AACT_1150 PF00448 SRP54-type protein, GTPase domain AACT_1151 PF00578 AhpC/TSA family AACT_1152 PF01812 5-formyltetrahydrofolate cyclo-ligase family AACT_1153 PF01966 HD domain AACT_1153 PF12072 Domain of unknown function (DUF3552) AACT_1153 PF00013 KH domain AACT_1155 PF00528 Binding-protein-dependent transport system inner membrane component AACT_1155 PF12911 N-terminal TM domain of oligopeptide transport permease C AACT_1156 PF00106 short chain dehydrogenase AACT_1160 PF17151 Periplasmic sensor domain AACT_1160 PF00990 Diguanylate cyclase, GGDEF domain AACT_1162 PF00005 ABC transporter AACT_1162 PF16326 ABC transporter C-terminal domain AACT_1162 PF12848 ABC transporter AACT_1164 PF14490 Helix-hairpin-helix containing domain AACT_1164 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AACT_1164 PF13538 UvrD-like helicase C-terminal domain AACT_1174 PF00211 Adenylate and Guanylate cyclase catalytic domain AACT_1174 PF00672 HAMP domain AACT_1175 PF01966 HD domain AACT_1176 PF01545 Cation efflux family AACT_1176 PF16916 Dimerisation domain of Zinc Transporter AACT_1177 PF00155 Aminotransferase class I and II AACT_1178 PF01863 Protein of unknown function DUF45 AACT_1180 PF00890 FAD binding domain AACT_1181 PF03600 Citrate transporter AACT_1182 PF02540 NAD synthase AACT_1182 PF00958 GMP synthase C terminal domain AACT_1182 PF00117 Glutamine amidotransferase class-I AACT_1184 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AACT_1185 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AACT_1188 PF00226 DnaJ domain AACT_1188 PF05099 Tellurite resistance protein TerB AACT_1191 PF00849 RNA pseudouridylate synthase AACT_1191 PF01479 S4 domain AACT_1192 PF00990 Diguanylate cyclase, GGDEF domain AACT_1194 PF08482 ATP-dependent helicase C-terminal AACT_1194 PF00271 Helicase conserved C-terminal domain AACT_1194 PF04408 Helicase associated domain (HA2) AACT_1194 PF00270 DEAD/DEAH box helicase AACT_1199 PF00849 RNA pseudouridylate synthase AACT_1204 PF01625 Peptide methionine sulfoxide reductase AACT_1208 PF13545 Crp-like helix-turn-helix domain AACT_1208 PF00027 Cyclic nucleotide-binding domain AACT_1211 PF00892 EamA-like transporter family AACT_1221 PF17746 SfsA N-terminal OB domain AACT_1221 PF03749 Sugar fermentation stimulation protein RE domain AACT_1223 PF00561 alpha/beta hydrolase fold AACT_1227 PF00072 Response regulator receiver domain AACT_1227 PF00512 His Kinase A (phospho-acceptor) domain AACT_1227 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1227 PF09308 LuxQ, periplasmic AACT_1235 PF01695 IstB-like ATP binding protein AACT_1236 PF00665 Integrase core domain AACT_1238 PF00512 His Kinase A (phospho-acceptor) domain AACT_1238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1238 PF00989 PAS fold AACT_1240 PF09308 LuxQ, periplasmic AACT_1240 PF00512 His Kinase A (phospho-acceptor) domain AACT_1240 PF00072 Response regulator receiver domain AACT_1240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1241 PF00486 Transcriptional regulatory protein, C terminal AACT_1242 PF02954 Bacterial regulatory protein, Fis family AACT_1242 PF00072 Response regulator receiver domain AACT_1242 PF00158 Sigma-54 interaction domain AACT_1243 PF00072 Response regulator receiver domain AACT_1243 PF00486 Transcriptional regulatory protein, C terminal AACT_1245 PF03062 MBOAT, membrane-bound O-acyltransferase family AACT_1250 PF14659 Phage integrase, N-terminal SAM-like domain AACT_1250 PF00589 Phage integrase family AACT_1251 PF08447 PAS fold AACT_1251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1251 PF08448 PAS fold AACT_1253 PF08447 PAS fold AACT_1253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1253 PF08448 PAS fold AACT_1254 PF00486 Transcriptional regulatory protein, C terminal AACT_1254 PF00072 Response regulator receiver domain AACT_1256 PF13667 ThiC-associated domain AACT_1256 PF01964 Radical SAM ThiC family AACT_1257 PF01266 FAD dependent oxidoreductase AACT_1258 PF05690 Thiazole biosynthesis protein ThiG AACT_1261 PF00072 Response regulator receiver domain AACT_1261 PF00486 Transcriptional regulatory protein, C terminal AACT_1262 PF02583 Metal-sensitive transcriptional repressor AACT_1269 PF03062 MBOAT, membrane-bound O-acyltransferase family AACT_1270 PF00849 RNA pseudouridylate synthase AACT_1271 PF03960 ArsC family AACT_1279 PF01272 Transcription elongation factor, GreA/GreB, C-term AACT_1279 PF03449 Transcription elongation factor, N-terminal AACT_1280 PF10672 S-adenosylmethionine-dependent methyltransferase AACT_1280 PF17785 PUA-like domain AACT_1281 PF00375 Sodium:dicarboxylate symporter family AACT_1282 PF07690 Major Facilitator Superfamily AACT_1286 PF02540 NAD synthase AACT_1286 PF00958 GMP synthase C terminal domain AACT_1286 PF00117 Glutamine amidotransferase class-I AACT_1289 PF01636 Phosphotransferase enzyme family AACT_1296 PF01595 Cyclin M transmembrane N-terminal domain AACT_1296 PF00571 CBS domain AACT_1297 PF03734 L,D-transpeptidase catalytic domain AACT_1297 PF01471 Putative peptidoglycan binding domain AACT_1299 PF01594 AI-2E family transporter AACT_1302 PF01243 Pyridoxamine 5'-phosphate oxidase AACT_1304 PF07411 Domain of unknown function (DUF1508) AACT_1305 PF00571 CBS domain AACT_1305 PF03471 Transporter associated domain AACT_1305 PF01595 Cyclin M transmembrane N-terminal domain AACT_1308 PF17760 UvrA interaction domain AACT_1308 PF17755 UvrA DNA-binding domain AACT_1310 PF00694 Aconitase C-terminal domain AACT_1310 PF00330 Aconitase family (aconitate hydratase) AACT_1314 PF00271 Helicase conserved C-terminal domain AACT_1314 PF00270 DEAD/DEAH box helicase AACT_1316 PF00132 Bacterial transferase hexapeptide (six repeats) AACT_1316 PF06426 Serine acetyltransferase, N-terminal AACT_1317 PF17810 Arginine decarboxylase helical bundle domain AACT_1317 PF17944 Arginine decarboxylase C-terminal helical extension AACT_1317 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AACT_1318 PF13393 Histidyl-tRNA synthetase AACT_1318 PF03129 Anticodon binding domain AACT_1319 PF02223 Thymidylate kinase AACT_1320 PF01467 Cytidylyltransferase-like AACT_1321 PF02441 Flavoprotein AACT_1323 PF01281 Ribosomal protein L9, N-terminal domain AACT_1323 PF03948 Ribosomal protein L9, C-terminal domain AACT_1324 PF00227 Proteasome subunit AACT_1325 PF10431 C-terminal, D2-small domain, of ClpB protein AACT_1325 PF07724 AAA domain (Cdc48 subfamily) AACT_1327 PF01026 TatD related DNase AACT_1328 PF01476 LysM domain AACT_1328 PF01464 Transglycosylase SLT domain AACT_1329 PF03330 Lytic transglycolase AACT_1329 PF05036 Sporulation related domain AACT_1330 PF00475 Imidazoleglycerol-phosphate dehydratase AACT_1334 PF01926 50S ribosome-binding GTPase AACT_1335 PF00583 Acetyltransferase (GNAT) family AACT_1338 PF00873 AcrB/AcrD/AcrF family AACT_1339 PF00873 AcrB/AcrD/AcrF family AACT_1340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AACT_1342 PF00813 FliP family AACT_1343 PF03717 Penicillin-binding Protein dimerisation domain AACT_1343 PF00905 Penicillin binding protein transpeptidase domain AACT_1343 PF05223 NTF2-like N-terminal transpeptidase domain AACT_1348 PF00732 GMC oxidoreductase AACT_1348 PF05199 GMC oxidoreductase AACT_1350 PF03960 ArsC family AACT_1354 PF02491 SHS2 domain inserted in FTSA AACT_1355 PF12327 FtsZ family, C-terminal domain AACT_1355 PF00091 Tubulin/FtsZ family, GTPase domain AACT_1358 PF04143 Sulphur transport AACT_1362 PF00962 Adenosine/AMP deaminase AACT_1364 PF00561 alpha/beta hydrolase fold AACT_1365 PF02609 Exonuclease VII small subunit AACT_1366 PF04002 RadC-like JAB domain AACT_1368 PF02384 N-6 DNA Methylase AACT_1369 PF01420 Type I restriction modification DNA specificity domain AACT_1373 PF00899 ThiF family AACT_1374 PF01810 LysE type translocator AACT_1375 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AACT_1375 PF02142 MGS-like domain AACT_1375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AACT_1382 PF13657 HipA N-terminal domain AACT_1382 PF07804 HipA-like C-terminal domain AACT_1384 PF08447 PAS fold AACT_1384 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1386 PF01609 Transposase DDE domain AACT_1388 PF13411 MerR HTH family regulatory protein AACT_1389 PF01556 DnaJ C terminal domain AACT_1389 PF00226 DnaJ domain AACT_1391 PF13426 PAS domain AACT_1391 PF13188 PAS domain AACT_1391 PF00989 PAS fold AACT_1391 PF00512 His Kinase A (phospho-acceptor) domain AACT_1391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1393 PF00072 Response regulator receiver domain AACT_1395 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AACT_1395 PF01266 FAD dependent oxidoreductase AACT_1397 PF00550 Phosphopantetheine attachment site AACT_1399 PF03062 MBOAT, membrane-bound O-acyltransferase family AACT_1400 PF13193 AMP-binding enzyme C-terminal domain AACT_1400 PF00501 AMP-binding enzyme AACT_1401 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AACT_1404 PF00216 Bacterial DNA-binding protein AACT_1406 PF01795 MraW methylase family AACT_1408 PF00873 AcrB/AcrD/AcrF family AACT_1412 PF00501 AMP-binding enzyme AACT_1412 PF13193 AMP-binding enzyme C-terminal domain AACT_1412 PF00668 Condensation domain AACT_1412 PF00550 Phosphopantetheine attachment site AACT_1412 PF00975 Thioesterase domain AACT_1413 PF13941 MutL protein AACT_1414 PF06368 Methylaspartate mutase E chain (MutE) AACT_1415 PF02310 B12 binding domain AACT_1417 PF03971 Monomeric isocitrate dehydrogenase AACT_1420 PF02687 FtsX-like permease family AACT_1420 PF12704 MacB-like periplasmic core domain AACT_1421 PF00271 Helicase conserved C-terminal domain AACT_1421 PF02810 SEC-C motif AACT_1421 PF01043 SecA preprotein cross-linking domain AACT_1421 PF07516 SecA Wing and Scaffold domain AACT_1421 PF07517 SecA DEAD-like domain AACT_1430 PF00149 Calcineurin-like phosphoesterase AACT_1431 PF02146 Sir2 family AACT_1432 PF12826 Helix-hairpin-helix motif AACT_1432 PF01653 NAD-dependent DNA ligase adenylation domain AACT_1432 PF00533 BRCA1 C Terminus (BRCT) domain AACT_1432 PF03120 NAD-dependent DNA ligase OB-fold domain AACT_1437 PF07687 Peptidase dimerisation domain AACT_1437 PF01546 Peptidase family M20/M25/M40 AACT_1438 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1438 PF00512 His Kinase A (phospho-acceptor) domain AACT_1438 PF08448 PAS fold AACT_1438 PF13188 PAS domain AACT_1438 PF00072 Response regulator receiver domain AACT_1439 PF00486 Transcriptional regulatory protein, C terminal AACT_1439 PF00072 Response regulator receiver domain AACT_1439 PF01627 Hpt domain AACT_1440 PF01578 Cytochrome C assembly protein AACT_1440 PF05140 ResB-like family AACT_1441 PF08003 Protein of unknown function (DUF1698) AACT_1442 PF00360 Phytochrome region AACT_1442 PF00990 Diguanylate cyclase, GGDEF domain AACT_1442 PF00563 EAL domain AACT_1442 PF01590 GAF domain AACT_1443 PF08448 PAS fold AACT_1443 PF00990 Diguanylate cyclase, GGDEF domain AACT_1443 PF00563 EAL domain AACT_1443 PF08447 PAS fold AACT_1444 PF00753 Metallo-beta-lactamase superfamily AACT_1448 PF00291 Pyridoxal-phosphate dependent enzyme AACT_1449 PF08448 PAS fold AACT_1449 PF08447 PAS fold AACT_1449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1451 PF00226 DnaJ domain AACT_1451 PF01556 DnaJ C terminal domain AACT_1451 PF00684 DnaJ central domain AACT_1452 PF02132 RecR protein AACT_1452 PF13662 Toprim domain AACT_1454 PF08447 PAS fold AACT_1454 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1456 PF00132 Bacterial transferase hexapeptide (six repeats) AACT_1459 PF18030 RimK PreATP-grasp domain AACT_1459 PF08443 RimK-like ATP-grasp domain AACT_1463 PF00764 Arginosuccinate synthase AACT_1465 PF00591 Glycosyl transferase family, a/b domain AACT_1465 PF02885 Glycosyl transferase family, helical bundle domain AACT_1466 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AACT_1467 PF00005 ABC transporter AACT_1467 PF12399 Branched-chain amino acid ATP-binding cassette transporter AACT_1468 PF00990 Diguanylate cyclase, GGDEF domain AACT_1468 PF08448 PAS fold AACT_1469 PF00990 Diguanylate cyclase, GGDEF domain AACT_1469 PF00563 EAL domain AACT_1469 PF08495 FIST N domain AACT_1469 PF10442 FIST C domain AACT_1470 PF02348 Cytidylyltransferase AACT_1471 PF00476 DNA polymerase family A AACT_1471 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AACT_1471 PF01367 5'-3' exonuclease, C-terminal SAM fold AACT_1475 PF01790 Prolipoprotein diacylglyceryl transferase AACT_1476 PF02754 Cysteine-rich domain AACT_1476 PF02665 Nitrate reductase gamma subunit AACT_1476 PF13183 4Fe-4S dicluster domain AACT_1478 PF03737 Aldolase/RraA AACT_1481 PF12867 DinB superfamily AACT_1481 PF03781 Sulfatase-modifying factor enzyme 1 AACT_1487 PF02547 Queuosine biosynthesis protein AACT_1488 PF00902 Sec-independent protein translocase protein (TatC) AACT_1490 PF00226 DnaJ domain AACT_1490 PF05099 Tellurite resistance protein TerB AACT_1494 PF02540 NAD synthase AACT_1495 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AACT_1496 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AACT_1498 PF04055 Radical SAM superfamily AACT_1498 PF06969 HemN C-terminal domain AACT_1499 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AACT_1499 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AACT_1500 PF03477 ATP cone domain AACT_1500 PF02867 Ribonucleotide reductase, barrel domain AACT_1500 PF00317 Ribonucleotide reductase, all-alpha domain AACT_1503 PF00486 Transcriptional regulatory protein, C terminal AACT_1503 PF00072 Response regulator receiver domain AACT_1504 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1504 PF08447 PAS fold AACT_1504 PF08448 PAS fold AACT_1505 PF00490 Delta-aminolevulinic acid dehydratase AACT_1506 PF00925 GTP cyclohydrolase II AACT_1507 PF02527 rRNA small subunit methyltransferase G AACT_1512 PF02092 Glycyl-tRNA synthetase beta subunit AACT_1513 PF01370 NAD dependent epimerase/dehydratase family AACT_1514 PF01638 HxlR-like helix-turn-helix AACT_1515 PF00881 Nitroreductase family AACT_1516 PF00106 short chain dehydrogenase AACT_1521 PF00925 GTP cyclohydrolase II AACT_1521 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AACT_1523 PF01293 Phosphoenolpyruvate carboxykinase AACT_1524 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AACT_1525 PF00364 Biotin-requiring enzyme AACT_1526 PF04277 Oxaloacetate decarboxylase, gamma chain AACT_1529 PF00133 tRNA synthetases class I (I, L, M and V) AACT_1529 PF09334 tRNA synthetases class I (M) AACT_1529 PF01588 Putative tRNA binding domain AACT_1531 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AACT_1536 PF00749 tRNA synthetases class I (E and Q), catalytic domain AACT_1537 PF05193 Peptidase M16 inactive domain AACT_1538 PF04055 Radical SAM superfamily AACT_1539 PF01103 Surface antigen AACT_1539 PF07244 Surface antigen variable number repeat AACT_1540 PF02153 Prephenate dehydrogenase AACT_1540 PF01842 ACT domain AACT_1541 PF00809 Pterin binding enzyme AACT_1544 PF00696 Amino acid kinase family AACT_1544 PF01842 ACT domain AACT_1544 PF13840 ACT domain AACT_1545 PF00293 NUDIX domain AACT_1546 PF06969 HemN C-terminal domain AACT_1546 PF04055 Radical SAM superfamily AACT_1547 PF05175 Methyltransferase small domain AACT_1547 PF17827 PrmC N-terminal domain AACT_1548 PF01432 Peptidase family M3 AACT_1552 PF18644 Phage integrase SAM-like domain AACT_1552 PF00589 Phage integrase family AACT_1553 PF00072 Response regulator receiver domain AACT_1553 PF01339 CheB methylesterase AACT_1554 PF03975 CheD chemotactic sensory transduction AACT_1555 PF01739 CheR methyltransferase, SAM binding domain AACT_1555 PF03705 CheR methyltransferase, all-alpha domain AACT_1556 PF01627 Hpt domain AACT_1556 PF02895 Signal transducing histidine kinase, homodimeric domain AACT_1556 PF09078 CheY binding AACT_1556 PF01584 CheW-like domain AACT_1556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1557 PF00072 Response regulator receiver domain AACT_1558 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AACT_1558 PF00013 KH domain AACT_1558 PF00575 S1 RNA binding domain AACT_1558 PF03725 3' exoribonuclease family, domain 2 AACT_1558 PF01138 3' exoribonuclease family, domain 1 AACT_1560 PF04453 LPS transport system D AACT_1560 PF03968 OstA-like protein AACT_1562 PF02843 Phosphoribosylglycinamide synthetase, C domain AACT_1562 PF02844 Phosphoribosylglycinamide synthetase, N domain AACT_1562 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AACT_1564 PF01740 STAS domain AACT_1564 PF00916 Sulfate permease family AACT_1565 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AACT_1565 PF01926 50S ribosome-binding GTPase AACT_1566 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AACT_1567 PF07196 Flagellin hook IN motif AACT_1567 PF07195 Flagellar hook-associated protein 2 C-terminus AACT_1567 PF02465 Flagellar hook-associated protein 2 N-terminus AACT_1570 PF00669 Bacterial flagellin N-terminal helical region AACT_1577 PF09397 Ftsk gamma domain AACT_1577 PF01580 FtsK/SpoIIIE family AACT_1577 PF17854 FtsK alpha domain AACT_1578 PF00132 Bacterial transferase hexapeptide (six repeats) AACT_1578 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AACT_1579 PF10369 Small subunit of acetolactate synthase AACT_1580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AACT_1580 PF00205 Thiamine pyrophosphate enzyme, central domain AACT_1580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AACT_1582 PF02541 Ppx/GppA phosphatase family AACT_1584 PF00360 Phytochrome region AACT_1584 PF01590 GAF domain AACT_1584 PF00990 Diguanylate cyclase, GGDEF domain AACT_1584 PF00563 EAL domain AACT_1586 PF00085 Thioredoxin AACT_1588 PF01171 PP-loop family AACT_1591 PF00994 Probable molybdopterin binding domain AACT_1591 PF03454 MoeA C-terminal region (domain IV) AACT_1591 PF03453 MoeA N-terminal region (domain I and II) AACT_1593 PF01590 GAF domain AACT_1593 PF00563 EAL domain AACT_1593 PF00360 Phytochrome region AACT_1593 PF00990 Diguanylate cyclase, GGDEF domain AACT_1594 PF04228 Putative neutral zinc metallopeptidase AACT_1596 PF02646 RmuC family AACT_1597 PF01435 Peptidase family M48 AACT_1597 PF16491 CAAX prenyl protease N-terminal, five membrane helices AACT_1599 PF03061 Thioesterase superfamily AACT_1600 PF00128 Alpha amylase, catalytic domain AACT_1600 PF02806 Alpha amylase, C-terminal all-beta domain AACT_1600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AACT_1601 PF08323 Starch synthase catalytic domain AACT_1601 PF00534 Glycosyl transferases group 1 AACT_1602 PF08323 Starch synthase catalytic domain AACT_1602 PF00534 Glycosyl transferases group 1 AACT_1604 PF03065 Glycosyl hydrolase family 57 AACT_1604 PF09094 Domain of unknown function (DUF1925) AACT_1604 PF09095 Domain of unknown function (DUF1926) AACT_1606 PF00483 Nucleotidyl transferase AACT_1607 PF11897 Protein of unknown function (DUF3417) AACT_1607 PF00343 Carbohydrate phosphorylase AACT_1609 PF02685 Glucokinase AACT_1610 PF13472 GDSL-like Lipase/Acylhydrolase family AACT_1611 PF00005 ABC transporter AACT_1613 PF00890 FAD binding domain AACT_1613 PF02910 Fumarate reductase flavoprotein C-term AACT_1618 PF00486 Transcriptional regulatory protein, C terminal AACT_1618 PF00072 Response regulator receiver domain AACT_1620 PF02203 Tar ligand binding domain homologue AACT_1620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1620 PF00672 HAMP domain AACT_1621 PF08448 PAS fold AACT_1621 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1621 PF08447 PAS fold AACT_1622 PF00248 Aldo/keto reductase family AACT_1625 PF06965 Na+/H+ antiporter 1 AACT_1626 PF00486 Transcriptional regulatory protein, C terminal AACT_1626 PF00072 Response regulator receiver domain AACT_1632 PF01032 FecCD transport family AACT_1633 PF00005 ABC transporter AACT_1634 PF01497 Periplasmic binding protein AACT_1635 PF07715 TonB-dependent Receptor Plug Domain AACT_1635 PF00593 TonB dependent receptor AACT_1639 PF00578 AhpC/TSA family AACT_1640 PF13419 Haloacid dehalogenase-like hydrolase AACT_1642 PF01479 S4 domain AACT_1642 PF00849 RNA pseudouridylate synthase AACT_1643 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AACT_1644 PF05971 RNA methyltransferase AACT_1646 PF00563 EAL domain AACT_1646 PF00990 Diguanylate cyclase, GGDEF domain AACT_1646 PF13426 PAS domain AACT_1648 PF02698 DUF218 domain AACT_1650 PF00990 Diguanylate cyclase, GGDEF domain AACT_1650 PF08448 PAS fold AACT_1652 PF03737 Aldolase/RraA AACT_1657 PF13476 AAA domain AACT_1660 PF02472 Biopolymer transport protein ExbD/TolR AACT_1661 PF01618 MotA/TolQ/ExbB proton channel family AACT_1662 PF00578 AhpC/TSA family AACT_1662 PF10417 C-terminal domain of 1-Cys peroxiredoxin AACT_1666 PF02001 Protein of unknown function DUF134 AACT_1668 PF01654 Cytochrome bd terminal oxidase subunit I AACT_1669 PF02322 Cytochrome bd terminal oxidase subunit II AACT_1672 PF01145 SPFH domain / Band 7 family AACT_1672 PF16200 C-terminal region of band_7 AACT_1673 PF00034 Cytochrome c AACT_1673 PF03150 Di-haem cytochrome c peroxidase AACT_1675 PF00072 Response regulator receiver domain AACT_1675 PF00486 Transcriptional regulatory protein, C terminal AACT_1677 PF00588 SpoU rRNA Methylase family AACT_1678 PF01842 ACT domain AACT_1678 PF00551 Formyl transferase AACT_1679 PF01515 Phosphate acetyl/butaryl transferase AACT_1679 PF00390 Malic enzyme, N-terminal domain AACT_1679 PF03949 Malic enzyme, NAD binding domain AACT_1680 PF02578 Multi-copper polyphenol oxidoreductase laccase AACT_1683 PF08501 Shikimate dehydrogenase substrate binding domain AACT_1686 PF03738 Glutathionylspermidine synthase preATP-grasp AACT_1687 PF03061 Thioesterase superfamily AACT_1688 PF12848 ABC transporter AACT_1688 PF00005 ABC transporter AACT_1690 PF00106 short chain dehydrogenase AACT_1693 PF01593 Flavin containing amine oxidoreductase AACT_1697 PF00563 EAL domain AACT_1697 PF12792 CSS motif domain associated with EAL AACT_1698 PF00672 HAMP domain AACT_1698 PF02203 Tar ligand binding domain homologue AACT_1698 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1699 PF08447 PAS fold AACT_1699 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1700 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AACT_1703 PF08212 Lipocalin-like domain AACT_1705 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AACT_1709 PF01593 Flavin containing amine oxidoreductase AACT_1712 PF00881 Nitroreductase family AACT_1713 PF00881 Nitroreductase family AACT_1716 PF01638 HxlR-like helix-turn-helix AACT_1720 PF03601 Conserved hypothetical protein 698 AACT_1721 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACT_1721 PF03466 LysR substrate binding domain AACT_1722 PF13536 Putative multidrug resistance efflux transporter AACT_1723 PF00248 Aldo/keto reductase family AACT_1727 PF00005 ABC transporter AACT_1728 PF01638 HxlR-like helix-turn-helix AACT_1729 PF07690 Major Facilitator Superfamily AACT_1731 PF01177 Asp/Glu/Hydantoin racemase AACT_1740 PF01934 Protein of unknown function DUF86 AACT_1742 PF01546 Peptidase family M20/M25/M40 AACT_1742 PF07687 Peptidase dimerisation domain AACT_1746 PF00488 MutS domain V AACT_1746 PF01713 Smr domain AACT_1749 PF00939 Sodium:sulfate symporter transmembrane region AACT_1750 PF00994 Probable molybdopterin binding domain AACT_1752 PF00004 ATPase family associated with various cellular activities (AAA) AACT_1752 PF17862 AAA+ lid domain AACT_1752 PF01434 Peptidase family M41 AACT_1753 PF04055 Radical SAM superfamily AACT_1753 PF00919 Uncharacterized protein family UPF0004 AACT_1755 PF01761 3-dehydroquinate synthase AACT_1756 PF00271 Helicase conserved C-terminal domain AACT_1756 PF00270 DEAD/DEAH box helicase AACT_1757 PF00762 Ferrochelatase AACT_1759 PF04397 LytTr DNA-binding domain AACT_1759 PF00072 Response regulator receiver domain AACT_1760 PF07694 5TMR of 5TMR-LYT AACT_1760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1760 PF06580 Histidine kinase AACT_1761 PF01850 PIN domain AACT_1764 PF00875 DNA photolyase AACT_1764 PF03441 FAD binding domain of DNA photolyase AACT_1769 PF00669 Bacterial flagellin N-terminal helical region AACT_1769 PF07196 Flagellin hook IN motif AACT_1769 PF00700 Bacterial flagellin C-terminal helical region AACT_1769 PF07196 Flagellin hook IN motif AACT_1769 PF00700 Bacterial flagellin C-terminal helical region AACT_1769 PF00669 Bacterial flagellin N-terminal helical region AACT_1772 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1773 PF00486 Transcriptional regulatory protein, C terminal AACT_1773 PF00072 Response regulator receiver domain AACT_1777 PF00664 ABC transporter transmembrane region AACT_1777 PF00005 ABC transporter AACT_1778 PF01594 AI-2E family transporter AACT_1780 PF00933 Glycosyl hydrolase family 3 N terminal domain AACT_1780 PF01915 Glycosyl hydrolase family 3 C-terminal domain AACT_1785 PF02652 L-lactate permease AACT_1786 PF00684 DnaJ central domain AACT_1786 PF01556 DnaJ C terminal domain AACT_1786 PF00226 DnaJ domain AACT_1789 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AACT_1794 PF00571 CBS domain AACT_1794 PF00478 IMP dehydrogenase / GMP reductase domain AACT_1795 PF01425 Amidase AACT_1796 PF01196 Ribosomal protein L17 AACT_1797 PF01000 RNA polymerase Rpb3/RpoA insert domain AACT_1797 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AACT_1797 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AACT_1798 PF01479 S4 domain AACT_1798 PF00163 Ribosomal protein S4/S9 N-terminal domain AACT_1799 PF00411 Ribosomal protein S11 AACT_1800 PF00416 Ribosomal protein S13/S18 AACT_1801 PF00444 Ribosomal protein L36 AACT_1804 PF00180 Isocitrate/isopropylmalate dehydrogenase AACT_1805 PF00694 Aconitase C-terminal domain AACT_1806 PF00140 Sigma-70 factor, region 1.2 AACT_1806 PF04542 Sigma-70 region 2 AACT_1806 PF04539 Sigma-70 region 3 AACT_1806 PF04545 Sigma-70, region 4 AACT_1810 PF06865 Pyrimidine/purine nucleoside phosphorylase AACT_1811 PF00202 Aminotransferase class-III AACT_1814 PF01098 Cell cycle protein AACT_1815 PF00849 RNA pseudouridylate synthase AACT_1815 PF01479 S4 domain AACT_1817 PF02390 Putative methyltransferase AACT_1818 PF00005 ABC transporter AACT_1821 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AACT_1823 PF00005 ABC transporter AACT_1823 PF12848 ABC transporter AACT_1823 PF16326 ABC transporter C-terminal domain AACT_1825 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AACT_1825 PF14602 Hexapeptide repeat of succinyl-transferase AACT_1826 PF17764 3′ DNA-binding domain (3′BD) AACT_1826 PF18074 Primosomal protein N C-terminal domain AACT_1826 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AACT_1826 PF00271 Helicase conserved C-terminal domain AACT_1826 PF00270 DEAD/DEAH box helicase AACT_1831 PF01914 MarC family integral membrane protein AACT_1832 PF00005 ABC transporter AACT_1833 PF12399 Branched-chain amino acid ATP-binding cassette transporter AACT_1833 PF00005 ABC transporter AACT_1834 PF11862 Domain of unknown function (DUF3382) AACT_1834 PF02653 Branched-chain amino acid transport system / permease component AACT_1835 PF02653 Branched-chain amino acid transport system / permease component AACT_1837 PF00842 Alanine racemase, C-terminal domain AACT_1837 PF01168 Alanine racemase, N-terminal domain AACT_1840 PF01266 FAD dependent oxidoreductase AACT_1841 PF01042 Endoribonuclease L-PSP AACT_1843 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AACT_1844 PF02769 AIR synthase related protein, C-terminal domain AACT_1844 PF00586 AIR synthase related protein, N-terminal domain AACT_1846 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AACT_1846 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AACT_1847 PF01924 Hydrogenase formation hypA family AACT_1848 PF01455 HupF/HypC family AACT_1849 PF02492 CobW/HypB/UreG, nucleotide-binding domain AACT_1857 PF08448 PAS fold AACT_1857 PF08447 PAS fold AACT_1857 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1858 PF05661 Protein of unknown function (DUF808) AACT_1861 PF12823 Domain of unknown function (DUF3817) AACT_1863 PF00034 Cytochrome c AACT_1863 PF03150 Di-haem cytochrome c peroxidase AACT_1865 PF08241 Methyltransferase domain AACT_1865 PF12697 Alpha/beta hydrolase family AACT_1868 PF02080 TrkA-C domain AACT_1868 PF03600 Citrate transporter AACT_1870 PF02926 THUMP domain AACT_1870 PF02568 Thiamine biosynthesis protein (ThiI) AACT_1873 PF00999 Sodium/hydrogen exchanger family AACT_1873 PF02080 TrkA-C domain AACT_1873 PF03471 Transporter associated domain AACT_1888 PF01300 Telomere recombination AACT_1888 PF07503 HypF finger AACT_1888 PF00708 Acylphosphatase AACT_1888 PF17788 HypF Kae1-like domain AACT_1890 PF12833 Helix-turn-helix domain AACT_1890 PF06719 AraC-type transcriptional regulator N-terminus AACT_1891 PF00465 Iron-containing alcohol dehydrogenase AACT_1894 PF01750 Hydrogenase maturation protease AACT_1895 PF01292 Prokaryotic cytochrome b561 AACT_1896 PF00374 Nickel-dependent hydrogenase AACT_1897 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AACT_1897 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AACT_1897 PF10518 TAT (twin-arginine translocation) pathway signal sequence AACT_1899 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AACT_1899 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AACT_1901 PF00391 PEP-utilising enzyme, mobile domain AACT_1901 PF02887 Pyruvate kinase, alpha/beta domain AACT_1901 PF00224 Pyruvate kinase, barrel domain AACT_1902 PF00171 Aldehyde dehydrogenase family AACT_1903 PF00392 Bacterial regulatory proteins, gntR family AACT_1903 PF07702 UTRA domain AACT_1905 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AACT_1905 PF00056 lactate/malate dehydrogenase, NAD binding domain AACT_1907 PF01081 KDPG and KHG aldolase AACT_1908 PF00920 Dehydratase family AACT_1909 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AACT_1910 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AACT_1910 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AACT_1911 PF00294 pfkB family carbohydrate kinase AACT_1912 PF08125 Mannitol dehydrogenase C-terminal domain AACT_1912 PF01232 Mannitol dehydrogenase Rossmann domain AACT_1913 PF03459 TOBE domain AACT_1913 PF00005 ABC transporter AACT_1913 PF17912 MalK OB fold domain AACT_1914 PF00528 Binding-protein-dependent transport system inner membrane component AACT_1915 PF00528 Binding-protein-dependent transport system inner membrane component AACT_1916 PF01547 Bacterial extracellular solute-binding protein AACT_1917 PF13419 Haloacid dehalogenase-like hydrolase AACT_1918 PF04198 Putative sugar-binding domain AACT_1919 PF03848 Tellurite resistance protein TehB AACT_1921 PF06434 Aconitate hydratase 2 N-terminus AACT_1921 PF11791 Aconitate B N-terminal domain AACT_1921 PF00330 Aconitase family (aconitate hydratase) AACT_1923 PF00360 Phytochrome region AACT_1923 PF00990 Diguanylate cyclase, GGDEF domain AACT_1923 PF01590 GAF domain AACT_1923 PF00563 EAL domain AACT_1926 PF00501 AMP-binding enzyme AACT_1927 PF00108 Thiolase, N-terminal domain AACT_1927 PF02803 Thiolase, C-terminal domain AACT_1928 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AACT_1928 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AACT_1928 PF00378 Enoyl-CoA hydratase/isomerase AACT_1929 PF09317 Domain of unknown function (DUF1974) AACT_1929 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AACT_1929 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AACT_1929 PF02770 Acyl-CoA dehydrogenase, middle domain AACT_1932 PF00990 Diguanylate cyclase, GGDEF domain AACT_1932 PF03707 Bacterial signalling protein N terminal repeat AACT_1932 PF00563 EAL domain AACT_1934 PF01709 Transcriptional regulator AACT_1939 PF03641 Possible lysine decarboxylase AACT_1941 PF08534 Redoxin AACT_1945 PF02600 Disulfide bond formation protein DsbB AACT_1948 PF03737 Aldolase/RraA AACT_1950 PF02028 BCCT, betaine/carnitine/choline family transporter AACT_1951 PF07690 Major Facilitator Superfamily AACT_1955 PF00999 Sodium/hydrogen exchanger family AACT_1955 PF02254 TrkA-N domain AACT_1958 PF01263 Aldose 1-epimerase AACT_1959 PF00905 Penicillin binding protein transpeptidase domain AACT_1960 PF00270 DEAD/DEAH box helicase AACT_1960 PF00271 Helicase conserved C-terminal domain AACT_1965 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AACT_1965 PF18381 YcaO cyclodehydratase C-terminal domain AACT_1970 PF02203 Tar ligand binding domain homologue AACT_1970 PF00672 HAMP domain AACT_1970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_1971 PF00075 RNase H AACT_1972 PF00682 HMGL-like AACT_1975 PF00817 impB/mucB/samB family AACT_1975 PF11799 impB/mucB/samB family C-terminal domain AACT_1978 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding AACT_1978 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_1978 PF10518 TAT (twin-arginine translocation) pathway signal sequence AACT_1981 PF00005 ABC transporter AACT_1982 PF00528 Binding-protein-dependent transport system inner membrane component AACT_1983 PF12849 PBP superfamily domain AACT_1984 PF00994 Probable molybdopterin binding domain AACT_1984 PF03454 MoeA C-terminal region (domain IV) AACT_1984 PF03453 MoeA N-terminal region (domain I and II) AACT_1988 PF02634 FdhD/NarQ family AACT_1990 PF13247 4Fe-4S dicluster domain AACT_1995 PF01609 Transposase DDE domain AACT_1997 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_1997 PF00512 His Kinase A (phospho-acceptor) domain AACT_1998 PF00072 Response regulator receiver domain AACT_1999 PF00873 AcrB/AcrD/AcrF family AACT_2001 PF00440 Bacterial regulatory proteins, tetR family AACT_2001 PF08359 YsiA-like protein, C-terminal region AACT_2003 PF02678 Pirin AACT_2003 PF17954 Quercetinase C-terminal cupin domain AACT_2006 PF04264 YceI-like domain AACT_2010 PF01841 Transglutaminase-like superfamily AACT_2015 PF03841 L-seryl-tRNA selenium transferase AACT_2016 PF00009 Elongation factor Tu GTP binding domain AACT_2016 PF03144 Elongation factor Tu domain 2 AACT_2016 PF09106 Elongation factor SelB, winged helix AACT_2016 PF09107 Elongation factor SelB, winged helix AACT_2019 PF00072 Response regulator receiver domain AACT_2019 PF00158 Sigma-54 interaction domain AACT_2020 PF08448 PAS fold AACT_2020 PF08447 PAS fold AACT_2020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2021 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AACT_2021 PF00072 Response regulator receiver domain AACT_2021 PF00512 His Kinase A (phospho-acceptor) domain AACT_2021 PF01627 Hpt domain AACT_2021 PF00672 HAMP domain AACT_2021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2032 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2032 PF08447 PAS fold AACT_2032 PF08448 PAS fold AACT_2036 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AACT_2036 PF01243 Pyridoxamine 5'-phosphate oxidase AACT_2039 PF00563 EAL domain AACT_2039 PF03707 Bacterial signalling protein N terminal repeat AACT_2039 PF00990 Diguanylate cyclase, GGDEF domain AACT_2046 PF02626 Carboxyltransferase domain, subdomain A and B AACT_2047 PF02682 Carboxyltransferase domain, subdomain C and D AACT_2048 PF03746 LamB/YcsF family AACT_2049 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AACT_2051 PF03480 Bacterial extracellular solute-binding protein, family 7 AACT_2052 PF00072 Response regulator receiver domain AACT_2052 PF12833 Helix-turn-helix domain AACT_2053 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2053 PF00512 His Kinase A (phospho-acceptor) domain AACT_2053 PF00989 PAS fold AACT_2054 PF03641 Possible lysine decarboxylase AACT_2055 PF08448 PAS fold AACT_2055 PF00990 Diguanylate cyclase, GGDEF domain AACT_2061 PF00005 ABC transporter AACT_2062 PF13533 Biotin-lipoyl like AACT_2063 PF18665 Tetracyclin repressor-like, C-terminal domain AACT_2063 PF00440 Bacterial regulatory proteins, tetR family AACT_2064 PF00183 Hsp90 protein AACT_2069 PF01370 NAD dependent epimerase/dehydratase family AACT_2070 PF00535 Glycosyl transferase family 2 AACT_2072 PF12796 Ankyrin repeats (3 copies) AACT_2072 PF00023 Ankyrin repeat AACT_2073 PF06628 Catalase-related immune-responsive AACT_2073 PF00199 Catalase AACT_2074 PF02470 MlaD protein AACT_2075 PF04403 Paraquat-inducible protein A AACT_2078 PF00563 EAL domain AACT_2078 PF00990 Diguanylate cyclase, GGDEF domain AACT_2078 PF08448 PAS fold AACT_2080 PF05088 Bacterial NAD-glutamate dehydrogenase AACT_2081 PF04073 Aminoacyl-tRNA editing domain AACT_2082 PF08713 DNA alkylation repair enzyme AACT_2084 PF00491 Arginase family AACT_2085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_2085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AACT_2086 PF07995 Glucose / Sorbosone dehydrogenase AACT_2088 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AACT_2088 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AACT_2089 PF02833 DHHA2 domain AACT_2089 PF01368 DHH family AACT_2090 PF00990 Diguanylate cyclase, GGDEF domain AACT_2090 PF00563 EAL domain AACT_2090 PF01590 GAF domain AACT_2090 PF00360 Phytochrome region AACT_2091 PF08448 PAS fold AACT_2091 PF08447 PAS fold AACT_2091 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2092 PF03707 Bacterial signalling protein N terminal repeat AACT_2092 PF00990 Diguanylate cyclase, GGDEF domain AACT_2092 PF00563 EAL domain AACT_2093 PF01266 FAD dependent oxidoreductase AACT_2099 PF01627 Hpt domain AACT_2099 PF00072 Response regulator receiver domain AACT_2099 PF00486 Transcriptional regulatory protein, C terminal AACT_2100 PF08448 PAS fold AACT_2100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2100 PF08447 PAS fold AACT_2102 PF10415 Fumarase C C-terminus AACT_2102 PF00206 Lyase AACT_2104 PF00512 His Kinase A (phospho-acceptor) domain AACT_2104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2104 PF02743 Cache domain AACT_2105 PF01235 Sodium:alanine symporter family AACT_2106 PF01048 Phosphorylase superfamily AACT_2107 PF00698 Acyl transferase domain AACT_2108 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AACT_2111 PF04052 TolB amino-terminal domain AACT_2113 PF02472 Biopolymer transport protein ExbD/TolR AACT_2114 PF01618 MotA/TolQ/ExbB proton channel family AACT_2115 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AACT_2116 PF02874 ATP synthase alpha/beta family, beta-barrel domain AACT_2116 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AACT_2117 PF00231 ATP synthase AACT_2118 PF02874 ATP synthase alpha/beta family, beta-barrel domain AACT_2118 PF00306 ATP synthase alpha/beta chain, C terminal domain AACT_2118 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AACT_2119 PF00213 ATP synthase delta (OSCP) subunit AACT_2120 PF00430 ATP synthase B/B' CF(0) AACT_2122 PF02195 ParB-like nuclease domain AACT_2122 PF17762 HTH domain found in ParB protein AACT_2123 PF13614 AAA domain AACT_2127 PF02911 Formyl transferase, C-terminal domain AACT_2127 PF00551 Formyl transferase AACT_2128 PF00696 Amino acid kinase family AACT_2129 PF01018 GTP1/OBG AACT_2129 PF01926 50S ribosome-binding GTPase AACT_2130 PF01016 Ribosomal L27 protein AACT_2131 PF00829 Ribosomal prokaryotic L21 protein AACT_2132 PF01042 Endoribonuclease L-PSP AACT_2133 PF16730 DnaG-primase C-terminal, helicase-binding domain AACT_2133 PF13662 Toprim domain AACT_2133 PF08275 DNA primase catalytic core, N-terminal domain AACT_2133 PF01807 CHC2 zinc finger AACT_2135 PF00035 Double-stranded RNA binding motif AACT_2135 PF14622 Ribonuclease-III-like AACT_2136 PF01264 Chorismate synthase AACT_2138 PF07943 Penicillin-binding protein 5, C-terminal domain AACT_2138 PF00768 D-alanyl-D-alanine carboxypeptidase AACT_2139 PF01435 Peptidase family M48 AACT_2141 PF00300 Histidine phosphatase superfamily (branch 1) AACT_2143 PF01926 50S ribosome-binding GTPase AACT_2143 PF12631 MnmE helical domain AACT_2143 PF10396 GTP-binding protein TrmE N-terminus AACT_2145 PF14849 YidC periplasmic domain AACT_2145 PF02096 60Kd inner membrane protein AACT_2146 PF01809 Putative membrane protein insertion efficiency factor AACT_2147 PF00825 Ribonuclease P AACT_2148 PF00468 Ribosomal protein L34 AACT_2149 PF10431 C-terminal, D2-small domain, of ClpB protein AACT_2149 PF17871 AAA lid domain AACT_2149 PF07724 AAA domain (Cdc48 subfamily) AACT_2149 PF00004 ATPase family associated with various cellular activities (AAA) AACT_2149 PF02861 Clp amino terminal domain, pathogenicity island component AACT_2150 PF01351 Ribonuclease HII AACT_2151 PF07694 5TMR of 5TMR-LYT AACT_2151 PF00990 Diguanylate cyclase, GGDEF domain AACT_2154 PF01625 Peptide methionine sulfoxide reductase AACT_2155 PF01641 SelR domain AACT_2156 PF00072 Response regulator receiver domain AACT_2157 PF00072 Response regulator receiver domain AACT_2158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2158 PF09308 LuxQ, periplasmic AACT_2158 PF00072 Response regulator receiver domain AACT_2158 PF00512 His Kinase A (phospho-acceptor) domain AACT_2159 PF01557 Fumarylacetoacetate (FAA) hydrolase family AACT_2162 PF00202 Aminotransferase class-III AACT_2165 PF01808 AICARFT/IMPCHase bienzyme AACT_2165 PF02142 MGS-like domain AACT_2168 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AACT_2168 PF18764 Nitrous oxide reductase propeller repeat AACT_2168 PF18793 Nitrous oxide reductase propeller repeat 2 AACT_2171 PF12838 4Fe-4S dicluster domain AACT_2171 PF12800 4Fe-4S binding domain AACT_2173 PF00034 Cytochrome c AACT_2174 PF12801 4Fe-4S binding domain AACT_2174 PF13237 4Fe-4S dicluster domain AACT_2175 PF00005 ABC transporter AACT_2175 PF12857 TOBE-like domain AACT_2177 PF00586 AIR synthase related protein, N-terminal domain AACT_2177 PF02769 AIR synthase related protein, C-terminal domain AACT_2177 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AACT_2179 PF01476 LysM domain AACT_2179 PF08525 Opacity-associated protein A N-terminal motif AACT_2179 PF01551 Peptidase family M23 AACT_2181 PF01227 GTP cyclohydrolase I AACT_2182 PF01544 CorA-like Mg2+ transporter protein AACT_2184 PF00437 Type II/IV secretion system protein AACT_2187 PF07650 KH domain AACT_2187 PF01926 50S ribosome-binding GTPase AACT_2188 PF01078 Magnesium chelatase, subunit ChlI AACT_2188 PF13335 Magnesium chelatase, subunit ChlI C-terminal AACT_2190 PF01327 Polypeptide deformylase AACT_2191 PF00574 Clp protease AACT_2192 PF05698 Bacterial trigger factor protein (TF) C-terminus AACT_2192 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AACT_2192 PF05697 Bacterial trigger factor protein (TF) AACT_2193 PF07584 Aerotolerance regulator N-terminal AACT_2193 PF13519 von Willebrand factor type A domain AACT_2194 PF03976 Polyphosphate kinase 2 (PPK2) AACT_2195 PF03976 Polyphosphate kinase 2 (PPK2) AACT_2196 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AACT_2197 PF00301 Rubredoxin AACT_2198 PF16653 Saccharopine dehydrogenase C-terminal domain AACT_2198 PF03435 Saccharopine dehydrogenase NADP binding domain AACT_2208 PF03473 MOSC domain AACT_2209 PF00202 Aminotransferase class-III AACT_2213 PF00106 short chain dehydrogenase AACT_2214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2216 PF00301 Rubredoxin AACT_2217 PF00258 Flavodoxin AACT_2217 PF00753 Metallo-beta-lactamase superfamily AACT_2217 PF00301 Rubredoxin AACT_2220 PF00005 ABC transporter AACT_2222 PF00529 HlyD membrane-fusion protein of T1SS AACT_2222 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AACT_2224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2225 PF00486 Transcriptional regulatory protein, C terminal AACT_2225 PF00072 Response regulator receiver domain AACT_2228 PF02416 mttA/Hcf106 family AACT_2229 PF00005 ABC transporter AACT_2230 PF00528 Binding-protein-dependent transport system inner membrane component AACT_2231 PF03070 TENA/THI-4/PQQC family AACT_2232 PF09084 NMT1/THI5 like AACT_2238 PF13419 Haloacid dehalogenase-like hydrolase AACT_2247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2247 PF13426 PAS domain AACT_2247 PF00072 Response regulator receiver domain AACT_2250 PF01053 Cys/Met metabolism PLP-dependent enzyme AACT_2251 PF01053 Cys/Met metabolism PLP-dependent enzyme AACT_2253 PF01555 DNA methylase AACT_2265 PF00072 Response regulator receiver domain AACT_2265 PF00486 Transcriptional regulatory protein, C terminal AACT_2267 PF03824 High-affinity nickel-transport protein AACT_2268 PF01297 Zinc-uptake complex component A periplasmic AACT_2270 PF06965 Na+/H+ antiporter 1 AACT_2271 PF12833 Helix-turn-helix domain AACT_2271 PF02311 AraC-like ligand binding domain AACT_2274 PF00375 Sodium:dicarboxylate symporter family AACT_2275 PF00873 AcrB/AcrD/AcrF family AACT_2276 PF00529 HlyD membrane-fusion protein of T1SS AACT_2276 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AACT_2278 PF00440 Bacterial regulatory proteins, tetR family AACT_2280 PF01609 Transposase DDE domain AACT_2285 PF00137 ATP synthase subunit C AACT_2286 PF00672 HAMP domain AACT_2286 PF02743 Cache domain AACT_2286 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_2292 PF00924 Mechanosensitive ion channel AACT_2297 PF08543 Phosphomethylpyrimidine kinase AACT_2299 PF00171 Aldehyde dehydrogenase family AACT_2302 PF13746 4Fe-4S dicluster domain AACT_2302 PF12801 4Fe-4S binding domain AACT_2302 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AACT_2303 PF00512 His Kinase A (phospho-acceptor) domain AACT_2303 PF13426 PAS domain AACT_2303 PF13188 PAS domain AACT_2303 PF00989 PAS fold AACT_2303 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2304 PF12833 Helix-turn-helix domain AACT_2304 PF00072 Response regulator receiver domain AACT_2305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AACT_2305 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AACT_2306 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AACT_2306 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AACT_2306 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AACT_2306 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AACT_2314 PF00258 Flavodoxin AACT_2315 PF01475 Ferric uptake regulator family AACT_2317 PF07664 Ferrous iron transport protein B C terminus AACT_2317 PF02421 Ferrous iron transport protein B AACT_2317 PF07670 Nucleoside recognition AACT_2320 PF04377 Arginine-tRNA-protein transferase, C terminus AACT_2320 PF04376 Arginine-tRNA-protein transferase, N terminus AACT_2321 PF00290 Tryptophan synthase alpha chain AACT_2322 PF00654 Voltage gated chloride channel AACT_2323 PF00483 Nucleotidyl transferase AACT_2324 PF00128 Alpha amylase, catalytic domain AACT_2326 PF05161 MOFRL family AACT_2326 PF13660 Domain of unknown function (DUF4147) AACT_2328 PF02548 Ketopantoate hydroxymethyltransferase AACT_2329 PF05491 RuvB C-terminal winged helix domain AACT_2329 PF17864 RuvB AAA lid domain AACT_2329 PF05496 Holliday junction DNA helicase RuvB P-loop domain AACT_2330 PF01594 AI-2E family transporter AACT_2332 PF09905 DNA-binding protein VF530 AACT_2340 PF00005 ABC transporter AACT_2340 PF00571 CBS domain AACT_2341 PF00528 Binding-protein-dependent transport system inner membrane component AACT_2342 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AACT_2346 PF01638 HxlR-like helix-turn-helix AACT_2347 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AACT_2347 PF00749 tRNA synthetases class I (E and Q), catalytic domain AACT_2351 PF04055 Radical SAM superfamily AACT_2352 PF01208 Uroporphyrinogen decarboxylase (URO-D) AACT_2354 PF02774 Semialdehyde dehydrogenase, dimerisation domain AACT_2354 PF01118 Semialdehyde dehydrogenase, NAD binding domain AACT_2355 PF03989 DNA gyrase C-terminal domain, beta-propeller AACT_2355 PF00521 DNA gyrase/topoisomerase IV, subunit A AACT_2357 PF01960 ArgJ family AACT_2359 PF00830 Ribosomal L28 family AACT_2362 PF01370 NAD dependent epimerase/dehydratase family AACT_2364 PF13580 SIS domain AACT_2366 PF00534 Glycosyl transferases group 1 AACT_2366 PF13439 Glycosyltransferase Family 4 AACT_2370 PF00534 Glycosyl transferases group 1 AACT_2370 PF13439 Glycosyltransferase Family 4 AACT_2371 PF01522 Polysaccharide deacetylase AACT_2372 PF00534 Glycosyl transferases group 1 AACT_2372 PF13439 Glycosyltransferase Family 4 AACT_2373 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AACT_2373 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AACT_2373 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AACT_2377 PF12838 4Fe-4S dicluster domain AACT_2378 PF00459 Inositol monophosphatase family AACT_2379 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AACT_2379 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_2380 PF00310 Glutamine amidotransferases class-II AACT_2380 PF04898 Glutamate synthase central domain AACT_2380 PF01645 Conserved region in glutamate synthase AACT_2380 PF01493 GXGXG motif AACT_2381 PF03480 Bacterial extracellular solute-binding protein, family 7 AACT_2383 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AACT_2384 PF03009 Glycerophosphoryl diester phosphodiesterase family AACT_2385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2385 PF08447 PAS fold AACT_2385 PF08448 PAS fold AACT_2386 PF00072 Response regulator receiver domain AACT_2386 PF00486 Transcriptional regulatory protein, C terminal AACT_2392 PF01627 Hpt domain AACT_2392 PF00989 PAS fold AACT_2392 PF00072 Response regulator receiver domain AACT_2392 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2392 PF00497 Bacterial extracellular solute-binding proteins, family 3 AACT_2392 PF00512 His Kinase A (phospho-acceptor) domain AACT_2403 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AACT_2404 PF01029 NusB family AACT_2405 PF00885 6,7-dimethyl-8-ribityllumazine synthase AACT_2406 PF00793 DAHP synthetase I family AACT_2411 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AACT_2414 PF00263 Bacterial type II and III secretion system protein AACT_2414 PF03958 Bacterial type II/III secretion system short domain AACT_2415 PF09186 Domain of unknown function (DUF1949) AACT_2415 PF01205 Uncharacterized protein family UPF0029 AACT_2416 PF01728 FtsJ-like methyltransferase AACT_2416 PF01479 S4 domain AACT_2417 PF06574 FAD synthetase AACT_2417 PF01687 Riboflavin kinase AACT_2418 PF13649 Methyltransferase domain AACT_2419 PF00578 AhpC/TSA family AACT_2421 PF01565 FAD binding domain AACT_2421 PF02913 FAD linked oxidases, C-terminal domain AACT_2430 PF02861 Clp amino terminal domain, pathogenicity island component AACT_2430 PF00004 ATPase family associated with various cellular activities (AAA) AACT_2430 PF07724 AAA domain (Cdc48 subfamily) AACT_2430 PF17871 AAA lid domain AACT_2430 PF10431 C-terminal, D2-small domain, of ClpB protein AACT_2431 PF02617 ATP-dependent Clp protease adaptor protein ClpS AACT_2434 PF13193 AMP-binding enzyme C-terminal domain AACT_2434 PF00501 AMP-binding enzyme AACT_2435 PF01575 MaoC like domain AACT_2439 PF12323 Helix-turn-helix domain AACT_2439 PF01385 Probable transposase AACT_2439 PF07282 Putative transposase DNA-binding domain AACT_2440 PF02203 Tar ligand binding domain homologue AACT_2440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AACT_2440 PF00672 HAMP domain AACT_2444 PF01613 Flavin reductase like domain AACT_2453 PF00072 Response regulator receiver domain AACT_2454 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AACT_2454 PF00460 Flagella basal body rod protein AACT_2458 PF01695 IstB-like ATP binding protein AACT_2459 PF00665 Integrase core domain AACT_2461 PF01782 RimM N-terminal domain AACT_2463 PF00886 Ribosomal protein S16 AACT_2464 PF00448 SRP54-type protein, GTPase domain AACT_2464 PF02881 SRP54-type protein, helical bundle domain AACT_2464 PF02978 Signal peptide binding domain AACT_2465 PF00849 RNA pseudouridylate synthase AACT_2465 PF01479 S4 domain AACT_2466 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AACT_2468 PF01784 NIF3 (NGG1p interacting factor 3) AACT_2469 PF02091 Glycyl-tRNA synthetase alpha subunit AACT_2471 PF00731 AIR carboxylase AACT_2473 PF01136 Peptidase family U32 AACT_2476 PF13476 AAA domain AACT_2477 PF01513 ATP-NAD kinase AACT_2478 PF00679 Elongation factor G C-terminus AACT_2478 PF14492 Elongation Factor G, domain II AACT_2478 PF03764 Elongation factor G, domain IV AACT_2478 PF00009 Elongation factor Tu GTP binding domain AACT_2478 PF03144 Elongation factor Tu domain 2 AACT_2479 PF00177 Ribosomal protein S7p/S5e AACT_2480 PF00164 Ribosomal protein S12/S23 AACT_2481 PF07690 Major Facilitator Superfamily AACT_2482 PF09962 Uncharacterized conserved protein (DUF2196) AACT_2489 PF13657 HipA N-terminal domain AACT_2489 PF07804 HipA-like C-terminal domain AACT_2490 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AACT_2499 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AACT_2511 PF13614 AAA domain AACT_2515 PF02796 Helix-turn-helix domain of resolvase AACT_2515 PF00239 Resolvase, N terminal domain AACT_2522 PF01420 Type I restriction modification DNA specificity domain AACT_2523 PF12161 HsdM N-terminal domain AACT_2523 PF02384 N-6 DNA Methylase AACT_2525 PF08463 EcoEI R protein C-terminal AACT_2525 PF00271 Helicase conserved C-terminal domain AACT_2525 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AACT_2525 PF04851 Type III restriction enzyme, res subunit AACT_2526 PF00589 Phage integrase family AACT_2526 PF14659 Phage integrase, N-terminal SAM-like domain AACT_2526 PF13356 Arm DNA-binding domain AACT_2529 PF04997 RNA polymerase Rpb1, domain 1 AACT_2529 PF00623 RNA polymerase Rpb1, domain 2 AACT_2529 PF04983 RNA polymerase Rpb1, domain 3 AACT_2529 PF05000 RNA polymerase Rpb1, domain 4 AACT_2529 PF04998 RNA polymerase Rpb1, domain 5 AACT_2530 PF04565 RNA polymerase Rpb2, domain 3 AACT_2530 PF04561 RNA polymerase Rpb2, domain 2 AACT_2530 PF04563 RNA polymerase beta subunit AACT_2530 PF10385 RNA polymerase beta subunit external 1 domain AACT_2530 PF04560 RNA polymerase Rpb2, domain 7 AACT_2530 PF00562 RNA polymerase Rpb2, domain 6 AACT_2531 PF16320 Ribosomal protein L7/L12 dimerisation domain AACT_2531 PF00542 Ribosomal protein L7/L12 C-terminal domain AACT_2532 PF00466 Ribosomal protein L10 AACT_2533 PF00687 Ribosomal protein L1p/L10e family AACT_2534 PF00298 Ribosomal protein L11, RNA binding domain AACT_2534 PF03946 Ribosomal protein L11, N-terminal domain AACT_2535 PF02357 Transcription termination factor nusG AACT_2538 PF00471 Ribosomal protein L33 AACT_2539 PF03143 Elongation factor Tu C-terminal domain AACT_2539 PF03144 Elongation factor Tu domain 2 AACT_2539 PF00009 Elongation factor Tu GTP binding domain AACT_2544 PF08245 Mur ligase middle domain AACT_2545 PF00953 Glycosyl transferase family 4 AACT_2545 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AACT_2546 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AACT_2546 PF01676 Metalloenzyme superfamily AACT_2547 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AACT_2547 PF00005 ABC transporter AACT_2548 PF00912 Transglycosylase AACT_2548 PF00905 Penicillin binding protein transpeptidase domain AACT_2548 PF17092 Penicillin-binding protein OB-like domain AACT_2549 PF03951 Glutamine synthetase, beta-Grasp domain AACT_2549 PF00120 Glutamine synthetase, catalytic domain AACT_2551 PF02391 MoaE protein AACT_2553 PF02621 Menaquinone biosynthesis AACT_2554 PF02673 Bacitracin resistance protein BacA AACT_2555 PF03033 Glycosyltransferase family 28 N-terminal domain AACT_2555 PF04101 Glycosyltransferase family 28 C-terminal domain AACT_2556 PF01098 Cell cycle protein AACT_2557 PF00905 Penicillin binding protein transpeptidase domain AACT_2557 PF03717 Penicillin-binding Protein dimerisation domain AACT_2557 PF03793 PASTA domain AACT_2558 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AACT_2559 PF00529 HlyD membrane-fusion protein of T1SS AACT_2559 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AACT_2560 PF03412 Peptidase C39 family AACT_2560 PF00005 ABC transporter AACT_2560 PF00664 ABC transporter transmembrane region AACT_2562 PF00953 Glycosyl transferase family 4 AACT_2563 PF17191 RecG wedge domain AACT_2563 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AACT_2563 PF00270 DEAD/DEAH box helicase AACT_2564 PF16363 GDP-mannose 4,6 dehydratase AACT_2567 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AACT_2567 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AACT_2567 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AACT_2568 PF01370 NAD dependent epimerase/dehydratase family AACT_2569 PF01943 Polysaccharide biosynthesis protein AACT_2570 PF00535 Glycosyl transferase family 2 AACT_2571 PF00534 Glycosyl transferases group 1 AACT_2571 PF13439 Glycosyltransferase Family 4 AACT_2574 PF00534 Glycosyl transferases group 1 AACT_2575 PF01370 NAD dependent epimerase/dehydratase family AACT_2577 PF00483 Nucleotidyl transferase AACT_2577 PF01050 Mannose-6-phosphate isomerase AACT_2579 PF02706 Chain length determinant protein AACT_2579 PF13807 G-rich domain on putative tyrosine kinase AACT_2579 PF13614 AAA domain AACT_2585 PF08329 Chitinase A, N-terminal domain AACT_2585 PF00704 Glycosyl hydrolases family 18 AACT_2586 PF02954 Bacterial regulatory protein, Fis family AACT_2586 PF00072 Response regulator receiver domain AACT_2586 PF00158 Sigma-54 interaction domain AACT_2594 PF00117 Glutamine amidotransferase class-I AACT_2595 PF13416 Bacterial extracellular solute-binding protein AACT_2596 PF00528 Binding-protein-dependent transport system inner membrane component AACT_2597 PF00005 ABC transporter AACT_2602 PF01609 Transposase DDE domain AACT_2603 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AACT_2603 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AACT_2609 PF09371 Tex-like protein N-terminal domain AACT_2609 PF16921 Tex protein YqgF-like domain AACT_2609 PF17674 HHH domain AACT_2609 PF00575 S1 RNA binding domain AACT_2610 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AACT_2616 PF01042 Endoribonuclease L-PSP AACT_2617 PF00293 NUDIX domain AACT_2617 PF09297 NADH pyrophosphatase zinc ribbon domain AACT_2618 PF01810 LysE type translocator AACT_2619 PF01914 MarC family integral membrane protein AACT_2620 PF00528 Binding-protein-dependent transport system inner membrane component AACT_2621 PF00497 Bacterial extracellular solute-binding proteins, family 3 AACT_2622 PF00005 ABC transporter AACT_2624 PF12833 Helix-turn-helix domain AACT_2625 PF00392 Bacterial regulatory proteins, gntR family AACT_2625 PF00155 Aminotransferase class I and II AACT_2628 PF01645 Conserved region in glutamate synthase AACT_2629 PF00171 Aldehyde dehydrogenase family AACT_2630 PF00005 ABC transporter AACT_2631 PF00005 ABC transporter AACT_2631 PF12399 Branched-chain amino acid ATP-binding cassette transporter AACT_2632 PF11862 Domain of unknown function (DUF3382) AACT_2632 PF02653 Branched-chain amino acid transport system / permease component AACT_2633 PF02653 Branched-chain amino acid transport system / permease component AACT_2639 PF09335 SNARE associated Golgi protein AACT_2641 PF01245 Ribosomal protein L19 AACT_2642 PF01746 tRNA (Guanine-1)-methyltransferase AACT_2646 PF13291 ACT domain AACT_2646 PF00291 Pyridoxal-phosphate dependent enzyme AACT_2647 PF00119 ATP synthase A chain AACT_2649 PF13361 UvrD-like helicase C-terminal domain AACT_2649 PF00580 UvrD/REP helicase N-terminal domain AACT_2649 PF12705 PD-(D/E)XK nuclease superfamily AACT_2650 PF00696 Amino acid kinase family AACT_2651 PF00291 Pyridoxal-phosphate dependent enzyme AACT_2653 PF00032 Cytochrome b(C-terminal)/b6/petD AACT_2653 PF00033 Cytochrome b/b6/petB AACT_2655 PF04452 RNA methyltransferase AACT_2657 PF03453 MoeA N-terminal region (domain I and II) AACT_2657 PF00994 Probable molybdopterin binding domain AACT_2657 PF03454 MoeA C-terminal region (domain IV) AACT_2658 PF06508 Queuosine biosynthesis protein QueC AACT_2662 PF00550 Phosphopantetheine attachment site AACT_2663 PF00109 Beta-ketoacyl synthase, N-terminal domain AACT_2663 PF02801 Beta-ketoacyl synthase, C-terminal domain AACT_2664 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AACT_2665 PF01230 HIT domain AACT_2666 PF01409 tRNA synthetases class II core domain (F) AACT_2666 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AACT_2667 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AACT_2667 PF01588 Putative tRNA binding domain AACT_2667 PF03484 tRNA synthetase B5 domain AACT_2667 PF03147 Ferredoxin-fold anticodon binding domain AACT_2668 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AACT_2669 PF02401 LytB protein AACT_2670 PF00575 S1 RNA binding domain AACT_2671 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AACT_2671 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AACT_2671 PF01842 ACT domain AACT_2672 PF01132 Elongation factor P (EF-P) OB domain AACT_2672 PF08207 Elongation factor P (EF-P) KOW-like domain AACT_2672 PF09285 Elongation factor P, C-terminal AACT_2673 PF01872 RibD C-terminal domain AACT_2673 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AACT_2674 PF02576 RimP N-terminal domain AACT_2675 PF02033 Ribosome-binding factor A AACT_2676 PF04760 Translation initiation factor IF-2, N-terminal region AACT_2676 PF00009 Elongation factor Tu GTP binding domain AACT_2676 PF11987 Translation-initiation factor 2 AACT_2678 PF00288 GHMP kinases N terminal domain AACT_2678 PF08544 GHMP kinases C terminal AACT_2680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AACT_2681 PF01476 LysM domain AACT_2681 PF01551 Peptidase family M23 AACT_2683 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AACT_2683 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AACT_2684 PF02445 Quinolinate synthetase A protein AACT_2685 PF02660 Glycerol-3-phosphate acyltransferase AACT_2687 PF05538 Campylobacter major outer membrane protein AACT_2689 PF05538 Campylobacter major outer membrane protein AACT_2691 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AACT_2692 PF00472 RF-1 domain AACT_2692 PF03462 PCRF domain AACT_2697 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AACT_2697 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AACT_2700 PF00115 Cytochrome C and Quinol oxidase polypeptide I AACT_2701 PF01668 SmpB protein AACT_2702 PF00288 GHMP kinases N terminal domain AACT_2703 PF01509 TruB family pseudouridylate synthase (N terminal domain) AACT_2704 PF00580 UvrD/REP helicase N-terminal domain AACT_2704 PF13361 UvrD-like helicase C-terminal domain AACT_2705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AACT_2705 PF03466 LysR substrate binding domain AACT_2706 PF00795 Carbon-nitrogen hydrolase AACT_2706 PF00583 Acetyltransferase (GNAT) family AACT_2707 PF04055 Radical SAM superfamily AACT_2707 PF16199 Radical_SAM C-terminal domain AACT_2708 PF00156 Phosphoribosyl transferase domain AACT_2708 PF13537 Glutamine amidotransferase domain AACT_2709 PF05173 Dihydrodipicolinate reductase, C-terminus AACT_2709 PF01113 Dihydrodipicolinate reductase, N-terminus AACT_2710 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_2711 PF00085 Thioredoxin AACT_2712 PF02272 DHHA1 domain AACT_2712 PF01411 tRNA synthetases class II (A) AACT_2712 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AACT_2714 PF00877 NlpC/P60 family AACT_2716 PF00877 NlpC/P60 family AACT_2717 PF00877 NlpC/P60 family AACT_2720 PF02545 Maf-like protein AACT_2722 PF02779 Transketolase, pyrimidine binding domain AACT_2722 PF02780 Transketolase, C-terminal domain AACT_2722 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AACT_2723 PF00155 Aminotransferase class I and II AACT_2724 PF01842 ACT domain AACT_2724 PF01817 Chorismate mutase type II AACT_2724 PF00800 Prephenate dehydratase AACT_2725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AACT_2725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AACT_2727 PF00121 Triosephosphate isomerase AACT_2728 PF00162 Phosphoglycerate kinase AACT_2729 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AACT_2729 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AACT_2730 PF01467 Cytidylyltransferase-like AACT_2732 PF03485 Arginyl tRNA synthetase N terminal domain AACT_2732 PF05746 DALR anticodon binding domain AACT_2732 PF00750 tRNA synthetases class I (R) AACT_2733 PF02416 mttA/Hcf106 family AACT_2734 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AACT_2735 PF01553 Acyltransferase AACT_2738 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AACT_2739 PF01259 SAICAR synthetase AACT_2740 PF03572 Peptidase family S41 AACT_2740 PF13180 PDZ domain AACT_2743 PF01142 tRNA pseudouridine synthase D (TruD) AACT_2744 PF01258 Prokaryotic dksA/traR C4-type zinc finger AACT_2746 PF02687 FtsX-like permease family AACT_2746 PF12704 MacB-like periplasmic core domain AACT_2746 PF00005 ABC transporter AACT_2748 PF03741 Integral membrane protein TerC family AACT_2750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2750 PF08447 PAS fold AACT_2750 PF08448 PAS fold AACT_2751 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2751 PF08447 PAS fold AACT_2751 PF08448 PAS fold AACT_2752 PF10417 C-terminal domain of 1-Cys peroxiredoxin AACT_2752 PF00578 AhpC/TSA family AACT_2753 PF00085 Thioredoxin AACT_2756 PF08448 PAS fold AACT_2756 PF00990 Diguanylate cyclase, GGDEF domain AACT_2758 PF01609 Transposase DDE domain AACT_2760 PF00512 His Kinase A (phospho-acceptor) domain AACT_2760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2776 PF00589 Phage integrase family AACT_2776 PF13356 Arm DNA-binding domain AACT_2780 PF00920 Dehydratase family AACT_2781 PF13180 PDZ domain AACT_2781 PF17820 PDZ domain AACT_2782 PF00072 Response regulator receiver domain AACT_2782 PF00486 Transcriptional regulatory protein, C terminal AACT_2785 PF03186 CobD/Cbib protein AACT_2786 PF13460 NAD(P)H-binding AACT_2786 PF11066 Protein of unknown function (DUF2867) AACT_2787 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AACT_2787 PF07685 CobB/CobQ-like glutamine amidotransferase domain AACT_2796 PF00155 Aminotransferase class I and II AACT_2799 PF01914 MarC family integral membrane protein AACT_2800 PF13472 GDSL-like Lipase/Acylhydrolase family AACT_2800 PF02348 Cytidylyltransferase AACT_2801 PF02277 Phosphoribosyltransferase AACT_2802 PF00486 Transcriptional regulatory protein, C terminal AACT_2802 PF00072 Response regulator receiver domain AACT_2803 PF13426 PAS domain AACT_2803 PF13188 PAS domain AACT_2803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2803 PF00512 His Kinase A (phospho-acceptor) domain AACT_2803 PF00989 PAS fold AACT_2804 PF00939 Sodium:sulfate symporter transmembrane region AACT_2806 PF02683 Cytochrome C biogenesis protein transmembrane region AACT_2806 PF11412 Disulphide bond corrector protein DsbC AACT_2807 PF00085 Thioredoxin AACT_2808 PF00581 Rhodanese-like domain AACT_2809 PF18030 RimK PreATP-grasp domain AACT_2809 PF08443 RimK-like ATP-grasp domain AACT_2811 PF08443 RimK-like ATP-grasp domain AACT_2811 PF18030 RimK PreATP-grasp domain AACT_2814 PF08495 FIST N domain AACT_2814 PF00563 EAL domain AACT_2814 PF00990 Diguanylate cyclase, GGDEF domain AACT_2814 PF10442 FIST C domain AACT_2815 PF02666 Phosphatidylserine decarboxylase AACT_2817 PF03562 MltA specific insert domain AACT_2817 PF06725 3D domain AACT_2819 PF00012 Hsp70 protein AACT_2820 PF01025 GrpE AACT_2822 PF16868 NMT1-like family AACT_2824 PF00072 Response regulator receiver domain AACT_2824 PF00196 Bacterial regulatory proteins, luxR family AACT_2825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_2825 PF08447 PAS fold AACT_2825 PF08448 PAS fold AACT_2826 PF01416 tRNA pseudouridine synthase AACT_2828 PF06750 Bacterial Peptidase A24 N-terminal domain AACT_2828 PF01478 Type IV leader peptidase family AACT_2829 PF01255 Putative undecaprenyl diphosphate synthase AACT_2830 PF04127 DNA / pantothenate metabolism flavoprotein AACT_2830 PF02441 Flavoprotein AACT_2831 PF14602 Hexapeptide repeat of succinyl-transferase AACT_2831 PF12804 MobA-like NTP transferase domain AACT_2833 PF00270 DEAD/DEAH box helicase AACT_2833 PF08148 DSHCT (NUC185) domain AACT_2833 PF00271 Helicase conserved C-terminal domain AACT_2835 PF05958 tRNA (Uracil-5-)-methyltransferase AACT_2836 PF00700 Bacterial flagellin C-terminal helical region AACT_2836 PF07196 Flagellin hook IN motif AACT_2836 PF00669 Bacterial flagellin N-terminal helical region AACT_2838 PF00154 recA bacterial DNA recombination protein AACT_2839 PF00113 Enolase, C-terminal TIM barrel domain AACT_2839 PF03952 Enolase, N-terminal domain AACT_2842 PF00999 Sodium/hydrogen exchanger family AACT_2842 PF02080 TrkA-C domain AACT_2842 PF02254 TrkA-N domain AACT_2843 PF04055 Radical SAM superfamily AACT_2843 PF06968 Biotin and Thiamin Synthesis associated domain AACT_2845 PF13368 Topoisomerase C-terminal repeat AACT_2845 PF01751 Toprim domain AACT_2845 PF01131 DNA topoisomerase AACT_2846 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AACT_2847 PF02621 Menaquinone biosynthesis AACT_2849 PF00361 Proton-conducting membrane transporter AACT_2850 PF00361 Proton-conducting membrane transporter AACT_2850 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AACT_2851 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AACT_2851 PF00361 Proton-conducting membrane transporter AACT_2852 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AACT_2853 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AACT_2854 PF12838 4Fe-4S dicluster domain AACT_2855 PF00146 NADH dehydrogenase AACT_2856 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AACT_2856 PF00384 Molybdopterin oxidoreductase AACT_2856 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AACT_2856 PF01568 Molydopterin dinucleotide binding domain AACT_2856 PF13237 4Fe-4S dicluster domain AACT_2859 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AACT_2860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AACT_2861 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AACT_2862 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AACT_2863 PF00004 ATPase family associated with various cellular activities (AAA) AACT_2863 PF16450 Proteasomal ATPase OB C-terminal domain AACT_2863 PF17758 Proteasomal ATPase OB N-terminal domain AACT_2869 PF01740 STAS domain AACT_2869 PF00916 Sulfate permease family AACT_2871 PF01261 Xylose isomerase-like TIM barrel AACT_2872 PF07992 Pyridine nucleotide-disulphide oxidoreductase AACT_2874 PF02677 Epoxyqueuosine reductase QueH AACT_2875 PF02684 Lipid-A-disaccharide synthetase AACT_2876 PF07977 FabA-like domain AACT_2877 PF00132 Bacterial transferase hexapeptide (six repeats) AACT_2877 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AACT_2878 PF06689 ClpX C4-type zinc finger AACT_2878 PF10431 C-terminal, D2-small domain, of ClpB protein AACT_2878 PF07724 AAA domain (Cdc48 subfamily) AACT_2881 PF00677 Lumazine binding domain AACT_2882 PF13932 GidA associated domain AACT_2882 PF01134 Glucose inhibited division protein A AACT_2886 PF00072 Response regulator receiver domain AACT_2886 PF00990 Diguanylate cyclase, GGDEF domain AACT_2888 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AACT_2888 PF12801 4Fe-4S binding domain AACT_2888 PF13746 4Fe-4S dicluster domain AACT_2889 PF00117 Glutamine amidotransferase class-I AACT_2889 PF06418 CTP synthase N-terminus AACT_2890 PF01368 DHH family AACT_2890 PF02272 DHHA1 domain AACT_2890 PF17768 RecJ OB domain AACT_2890 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AACT_2893 PF01965 DJ-1/PfpI family AACT_2896 PF07733 Bacterial DNA polymerase III alpha NTPase domain AACT_2896 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AACT_2896 PF14579 Helix-hairpin-helix motif AACT_2896 PF02811 PHP domain AACT_2897 PF01975 Survival protein SurE AACT_2899 PF14659 Phage integrase, N-terminal SAM-like domain AACT_2899 PF00589 Phage integrase family AACT_2902 PF00665 Integrase core domain AACT_2903 PF01695 IstB-like ATP binding protein AACT_2906 PF02384 N-6 DNA Methylase AACT_2910 PF00239 Resolvase, N terminal domain AACT_2910 PF02796 Helix-turn-helix domain of resolvase AACT_2921 PF07728 AAA domain (dynein-related subfamily) AACT_2921 PF12102 Domain of unknown function (DUF3578) AACT_2924 PF01967 MoaC family AACT_2925 PF01165 Ribosomal protein S21 AACT_2931 PF01027 Inhibitor of apoptosis-promoting Bax1 AACT_2932 PF17792 ThiD2 family AACT_2932 PF02581 Thiamine monophosphate synthase AACT_2933 PF13847 Methyltransferase domain AACT_2934 PF03840 Preprotein translocase SecG subunit AACT_2936 PF01765 Ribosome recycling factor AACT_2937 PF00156 Phosphoribosyl transferase domain AACT_2939 PF12832 MFS_1 like family AACT_2941 PF12795 Mechanosensitive ion channel porin domain AACT_2941 PF12794 Mechanosensitive ion channel inner membrane domain 1 AACT_2941 PF00924 Mechanosensitive ion channel AACT_2943 PF03448 MgtE intracellular N domain AACT_2943 PF01769 Divalent cation transporter AACT_2943 PF00571 CBS domain AACT_2944 PF01544 CorA-like Mg2+ transporter protein AACT_2945 PF03883 Peroxide stress protein YaaA AACT_2946 PF02810 SEC-C motif AACT_2947 PF12826 Helix-hairpin-helix motif AACT_2947 PF00533 BRCA1 C Terminus (BRCT) domain AACT_2947 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AACT_2947 PF01653 NAD-dependent DNA ligase adenylation domain AACT_2947 PF03120 NAD-dependent DNA ligase OB-fold domain AACT_2949 PF13545 Crp-like helix-turn-helix domain AACT_2949 PF00027 Cyclic nucleotide-binding domain AACT_2951 PF03167 Uracil DNA glycosylase superfamily AACT_2952 PF00171 Aldehyde dehydrogenase family AACT_2953 PF00205 Thiamine pyrophosphate enzyme, central domain AACT_2953 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AACT_2953 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AACT_2954 PF04011 LemA family AACT_2957 PF13419 Haloacid dehalogenase-like hydrolase AACT_2961 PF10005 zinc-ribbon domain AACT_2961 PF15887 Putative zinc-binding metallo-peptidase AACT_2963 PF07690 Major Facilitator Superfamily AACT_2965 PF00211 Adenylate and Guanylate cyclase catalytic domain AACT_2967 PF01814 Hemerythrin HHE cation binding domain AACT_2972 PF00875 DNA photolyase AACT_2972 PF03441 FAD binding domain of DNA photolyase AACT_2986 PF01053 Cys/Met metabolism PLP-dependent enzyme AACT_2987 PF02082 Transcriptional regulator AACT_2988 PF00291 Pyridoxal-phosphate dependent enzyme AACT_2990 PF01507 Phosphoadenosine phosphosulfate reductase family AACT_2991 PF01507 Phosphoadenosine phosphosulfate reductase family AACT_2993 PF00009 Elongation factor Tu GTP binding domain AACT_2994 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AACT_2994 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AACT_2995 PF02347 Glycine cleavage system P-protein AACT_2996 PF01590 GAF domain AACT_2996 PF00563 EAL domain AACT_2996 PF00360 Phytochrome region AACT_2996 PF00990 Diguanylate cyclase, GGDEF domain AACT_2997 PF00149 Calcineurin-like phosphoesterase AACT_2998 PF00011 Hsp20/alpha crystallin family AACT_3000 PF14403 Circularly permuted ATP-grasp type 2 AACT_3001 PF01841 Transglutaminase-like superfamily AACT_3001 PF08379 Bacterial transglutaminase-like N-terminal region AACT_3005 PF14403 Circularly permuted ATP-grasp type 2 AACT_3006 PF03144 Elongation factor Tu domain 2 AACT_3006 PF00009 Elongation factor Tu GTP binding domain AACT_3006 PF00679 Elongation factor G C-terminus AACT_3007 PF08019 Phosphoethanolamine transferase EptA/EptB AACT_3007 PF00884 Sulfatase AACT_3009 PF01219 Prokaryotic diacylglycerol kinase AACT_3017 PF00072 Response regulator receiver domain AACT_3017 PF00486 Transcriptional regulatory protein, C terminal AACT_3018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AACT_3018 PF00512 His Kinase A (phospho-acceptor) domain AACT_3018 PF00672 HAMP domain AACT_3019 PF04143 Sulphur transport AACT_3020 PF01206 Sulfurtransferase TusA AACT_3022 PF01609 Transposase DDE domain AACT_3023 PF00990 Diguanylate cyclase, GGDEF domain AACT_3026 PF04960 Glutaminase AACT_3027 PF03458 UPF0126 domain AACT_3029 PF00551 Formyl transferase AACT_3030 PF02075 Crossover junction endodeoxyribonuclease RuvC