locus-tag class description AANAER_0001 PF11638 DnaA N-terminal domain AANAER_0001 PF00308 Bacterial dnaA protein AANAER_0001 PF08299 Bacterial dnaA protein helix-turn-helix AANAER_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain AANAER_0002 PF02767 DNA polymerase III beta subunit, central domain AANAER_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain AANAER_0003 PF01751 Toprim domain AANAER_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0003 PF00986 DNA gyrase B subunit, carboxyl terminus AANAER_0003 PF00204 DNA gyrase B AANAER_0006 PF00072 Response regulator receiver domain AANAER_0006 PF13426 PAS domain AANAER_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0008 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AANAER_0009 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AANAER_0009 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AANAER_0011 PF01810 LysE type translocator AANAER_0012 PF12833 Helix-turn-helix domain AANAER_0012 PF12852 Cupin AANAER_0014 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_0015 PF14489 QueF-like protein AANAER_0020 PF02492 CobW/HypB/UreG, nucleotide-binding domain AANAER_0021 PF01730 UreF AANAER_0022 PF05194 UreE urease accessory protein, C-terminal domain AANAER_0023 PF00449 Urease alpha-subunit, N-terminal domain AANAER_0023 PF01979 Amidohydrolase family AANAER_0024 PF00699 Urease beta subunit AANAER_0024 PF00547 Urease, gamma subunit AANAER_0025 PF01274 Malate synthase AANAER_0026 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AANAER_0027 PF04115 Ureidoglycolate lyase AANAER_0028 PF03561 Allantoicase repeat AANAER_0032 PF01177 Asp/Glu/Hydantoin racemase AANAER_0033 PF00005 ABC transporter AANAER_0034 PF12399 Branched-chain amino acid ATP-binding cassette transporter AANAER_0034 PF00005 ABC transporter AANAER_0035 PF02653 Branched-chain amino acid transport system / permease component AANAER_0035 PF11862 Domain of unknown function (DUF3382) AANAER_0036 PF02653 Branched-chain amino acid transport system / permease component AANAER_0037 PF13458 Periplasmic binding protein AANAER_0039 PF02653 Branched-chain amino acid transport system / permease component AANAER_0040 PF00005 ABC transporter AANAER_0041 PF04115 Ureidoglycolate lyase AANAER_0042 PF03480 Bacterial extracellular solute-binding protein, family 7 AANAER_0044 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AANAER_0047 PF01774 UreD urease accessory protein AANAER_0048 PF00005 ABC transporter AANAER_0049 PF12399 Branched-chain amino acid ATP-binding cassette transporter AANAER_0049 PF00005 ABC transporter AANAER_0051 PF02653 Branched-chain amino acid transport system / permease component AANAER_0052 PF00158 Sigma-54 interaction domain AANAER_0052 PF13188 PAS domain AANAER_0052 PF02954 Bacterial regulatory protein, Fis family AANAER_0056 PF09308 LuxQ, periplasmic AANAER_0056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0056 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0056 PF00072 Response regulator receiver domain AANAER_0057 PF00486 Transcriptional regulatory protein, C terminal AANAER_0057 PF00072 Response regulator receiver domain AANAER_0058 PF00072 Response regulator receiver domain AANAER_0058 PF00486 Transcriptional regulatory protein, C terminal AANAER_0060 PF02203 Tar ligand binding domain homologue AANAER_0060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0060 PF00672 HAMP domain AANAER_0061 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0061 PF03707 Bacterial signalling protein N terminal repeat AANAER_0061 PF00563 EAL domain AANAER_0062 PF00037 4Fe-4S binding domain AANAER_0064 PF10431 C-terminal, D2-small domain, of ClpB protein AANAER_0064 PF07724 AAA domain (Cdc48 subfamily) AANAER_0064 PF06689 ClpX C4-type zinc finger AANAER_0067 PF01590 GAF domain AANAER_0067 PF02954 Bacterial regulatory protein, Fis family AANAER_0067 PF00158 Sigma-54 interaction domain AANAER_0068 PF06988 NifT/FixU protein AANAER_0069 PF00890 FAD binding domain AANAER_0069 PF02910 Fumarate reductase flavoprotein C-term AANAER_0070 PF00248 Aldo/keto reductase family AANAER_0071 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AANAER_0071 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AANAER_0073 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0075 PF00005 ABC transporter AANAER_0075 PF08402 TOBE domain AANAER_0076 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0079 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AANAER_0079 PF03459 TOBE domain AANAER_0081 PF00148 Nitrogenase component 1 type Oxidoreductase AANAER_0083 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AANAER_0084 PF13091 PLD-like domain AANAER_0084 PF13396 Phospholipase_D-nuclease N-terminal AANAER_0086 PF00690 Cation transporter/ATPase, N-terminus AANAER_0086 PF00689 Cation transporting ATPase, C-terminus AANAER_0087 PF04552 Sigma-54, DNA binding domain AANAER_0087 PF04963 Sigma-54 factor, core binding domain AANAER_0087 PF00309 Sigma-54 factor, Activator interacting domain (AID) AANAER_0088 PF00111 2Fe-2S iron-sulfur cluster binding domain AANAER_0092 PF00258 Flavodoxin AANAER_0094 PF02579 Dinitrogenase iron-molybdenum cofactor AANAER_0098 PF08534 Redoxin AANAER_0102 PF01594 AI-2E family transporter AANAER_0106 PF00037 4Fe-4S binding domain AANAER_0108 PF02579 Dinitrogenase iron-molybdenum cofactor AANAER_0109 PF00753 Metallo-beta-lactamase superfamily AANAER_0109 PF00258 Flavodoxin AANAER_0111 PF04055 Radical SAM superfamily AANAER_0111 PF02579 Dinitrogenase iron-molybdenum cofactor AANAER_0113 PF00682 HMGL-like AANAER_0119 PF00849 RNA pseudouridylate synthase AANAER_0120 PF00206 Lyase AANAER_0120 PF10397 Adenylosuccinate lyase C-terminus AANAER_0121 PF03477 ATP cone domain AANAER_0121 PF02867 Ribonucleotide reductase, barrel domain AANAER_0121 PF00317 Ribonucleotide reductase, all-alpha domain AANAER_0122 PF00268 Ribonucleotide reductase, small chain AANAER_0123 PF00892 EamA-like transporter family AANAER_0124 PF12833 Helix-turn-helix domain AANAER_0127 PF01810 LysE type translocator AANAER_0129 PF00691 OmpA family AANAER_0129 PF13505 Outer membrane protein beta-barrel domain AANAER_0131 PF01451 Low molecular weight phosphotyrosine protein phosphatase AANAER_0132 PF00795 Carbon-nitrogen hydrolase AANAER_0133 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AANAER_0133 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AANAER_0133 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AANAER_0133 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AANAER_0134 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AANAER_0134 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AANAER_0135 PF01810 LysE type translocator AANAER_0136 PF00171 Aldehyde dehydrogenase family AANAER_0137 PF00085 Thioredoxin AANAER_0138 PF01638 HxlR-like helix-turn-helix AANAER_0139 PF08240 Alcohol dehydrogenase GroES-like domain AANAER_0139 PF00107 Zinc-binding dehydrogenase AANAER_0140 PF01638 HxlR-like helix-turn-helix AANAER_0141 PF03649 Uncharacterised protein family (UPF0014) AANAER_0142 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AANAER_0142 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AANAER_0143 PF02934 GatB/GatE catalytic domain AANAER_0143 PF02637 GatB domain AANAER_0144 PF09312 SurA N-terminal domain AANAER_0144 PF00639 PPIC-type PPIASE domain AANAER_0145 PF02913 FAD linked oxidases, C-terminal domain AANAER_0145 PF01565 FAD binding domain AANAER_0146 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AANAER_0148 PF03480 Bacterial extracellular solute-binding protein, family 7 AANAER_0149 PF00072 Response regulator receiver domain AANAER_0149 PF00486 Transcriptional regulatory protein, C terminal AANAER_0150 PF08447 PAS fold AANAER_0150 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0150 PF00989 PAS fold AANAER_0151 PF02589 LUD domain AANAER_0152 PF13183 4Fe-4S dicluster domain AANAER_0152 PF02589 LUD domain AANAER_0152 PF11870 Domain of unknown function (DUF3390) AANAER_0153 PF02754 Cysteine-rich domain AANAER_0154 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AANAER_0155 PF00364 Biotin-requiring enzyme AANAER_0156 PF00289 Biotin carboxylase, N-terminal domain AANAER_0156 PF02785 Biotin carboxylase C-terminal domain AANAER_0156 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AANAER_0157 PF00271 Helicase conserved C-terminal domain AANAER_0157 PF00270 DEAD/DEAH box helicase AANAER_0160 PF01384 Phosphate transporter family AANAER_0162 PF13537 Glutamine amidotransferase domain AANAER_0162 PF00733 Asparagine synthase AANAER_0165 PF03480 Bacterial extracellular solute-binding protein, family 7 AANAER_0166 PF13085 2Fe-2S iron-sulfur cluster binding domain AANAER_0167 PF02910 Fumarate reductase flavoprotein C-term AANAER_0167 PF00890 FAD binding domain AANAER_0169 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AANAER_0169 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AANAER_0170 PF13638 PIN domain AANAER_0170 PF02562 PhoH-like protein AANAER_0172 PF05496 Holliday junction DNA helicase RuvB P-loop domain AANAER_0172 PF16193 AAA C-terminal domain AANAER_0172 PF01661 Macro domain AANAER_0172 PF12002 MgsA AAA+ ATPase C terminal AANAER_0173 PF01479 S4 domain AANAER_0173 PF00849 RNA pseudouridylate synthase AANAER_0174 PF00571 CBS domain AANAER_0174 PF01380 SIS domain AANAER_0175 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AANAER_0175 PF00753 Metallo-beta-lactamase superfamily AANAER_0175 PF17770 Ribonuclease J C-terminal domain AANAER_0176 PF00398 Ribosomal RNA adenine dimethylase AANAER_0177 PF00977 Histidine biosynthesis protein AANAER_0180 PF04055 Radical SAM superfamily AANAER_0181 PF00749 tRNA synthetases class I (E and Q), catalytic domain AANAER_0182 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AANAER_0183 PF00873 AcrB/AcrD/AcrF family AANAER_0187 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0187 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0187 PF00672 HAMP domain AANAER_0187 PF13426 PAS domain AANAER_0188 PF00072 Response regulator receiver domain AANAER_0188 PF00486 Transcriptional regulatory protein, C terminal AANAER_0189 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0189 PF18719 ArlS sensor domain AANAER_0189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0190 PF00486 Transcriptional regulatory protein, C terminal AANAER_0190 PF00072 Response regulator receiver domain AANAER_0191 PF04264 YceI-like domain AANAER_0192 PF01554 MatE AANAER_0193 PF03447 Homoserine dehydrogenase, NAD binding domain AANAER_0193 PF00742 Homoserine dehydrogenase AANAER_0193 PF01842 ACT domain AANAER_0194 PF00155 Aminotransferase class I and II AANAER_0196 PF08032 RNA 2'-O ribose methyltransferase substrate binding AANAER_0196 PF00588 SpoU rRNA Methylase family AANAER_0197 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AANAER_0198 PF01197 Ribosomal protein L31 AANAER_0200 PF01040 UbiA prenyltransferase family AANAER_0203 PF04245 37-kD nucleoid-associated bacterial protein AANAER_0206 PF01177 Asp/Glu/Hydantoin racemase AANAER_0209 PF00072 Response regulator receiver domain AANAER_0209 PF00486 Transcriptional regulatory protein, C terminal AANAER_0210 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0210 PF00989 PAS fold AANAER_0210 PF00672 HAMP domain AANAER_0210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0211 PF00384 Molybdopterin oxidoreductase AANAER_0211 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AANAER_0211 PF01568 Molydopterin dinucleotide binding domain AANAER_0212 PF13247 4Fe-4S dicluster domain AANAER_0212 PF12800 4Fe-4S binding domain AANAER_0213 PF04976 DMSO reductase anchor subunit (DmsC) AANAER_0214 PF02613 Nitrate reductase delta subunit AANAER_0215 PF00916 Sulfate permease family AANAER_0215 PF01740 STAS domain AANAER_0219 PF02222 ATP-grasp domain AANAER_0220 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AANAER_0221 PF01678 Diaminopimelate epimerase AANAER_0222 PF01121 Dephospho-CoA kinase AANAER_0223 PF17284 Spermidine synthase tetramerisation domain AANAER_0224 PF00586 AIR synthase related protein, N-terminal domain AANAER_0224 PF02769 AIR synthase related protein, C-terminal domain AANAER_0225 PF02678 Pirin AANAER_0225 PF17954 Quercetinase C-terminal cupin domain AANAER_0228 PF04264 YceI-like domain AANAER_0231 PF00266 Aminotransferase class-V AANAER_0232 PF13393 Histidyl-tRNA synthetase AANAER_0233 PF00709 Adenylosuccinate synthetase AANAER_0235 PF00117 Glutamine amidotransferase class-I AANAER_0235 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AANAER_0238 PF02542 YgbB family AANAER_0238 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AANAER_0240 PF01964 Radical SAM ThiC family AANAER_0241 PF10609 NUBPL iron-transfer P-loop NTPase AANAER_0241 PF01883 Iron-sulfur cluster assembly protein AANAER_0242 PF01475 Ferric uptake regulator family AANAER_0243 PF13533 Biotin-lipoyl like AANAER_0244 PF00005 ABC transporter AANAER_0246 PF01502 Phosphoribosyl-AMP cyclohydrolase AANAER_0246 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AANAER_0249 PF01063 Amino-transferase class IV AANAER_0251 PF02310 B12 binding domain AANAER_0251 PF02574 Homocysteine S-methyltransferase AANAER_0251 PF00809 Pterin binding enzyme AANAER_0251 PF02965 Vitamin B12 dependent methionine synthase, activation domain AANAER_0251 PF02607 B12 binding domain AANAER_0253 PF09997 Predicted membrane protein (DUF2238) AANAER_0260 PF02664 S-Ribosylhomocysteinase (LuxS) AANAER_0263 PF00563 EAL domain AANAER_0263 PF08495 FIST N domain AANAER_0263 PF10442 FIST C domain AANAER_0263 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0264 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AANAER_0265 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AANAER_0265 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AANAER_0267 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AANAER_0268 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AANAER_0268 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AANAER_0268 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AANAER_0268 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AANAER_0268 PF10371 Domain of unknown function AANAER_0269 PF13419 Haloacid dehalogenase-like hydrolase AANAER_0270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AANAER_0272 PF00380 Ribosomal protein S9/S16 AANAER_0273 PF00572 Ribosomal protein L13 AANAER_0274 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0274 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0274 PF00672 HAMP domain AANAER_0275 PF00486 Transcriptional regulatory protein, C terminal AANAER_0275 PF00072 Response regulator receiver domain AANAER_0278 PF00005 ABC transporter AANAER_0279 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0280 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0282 PF12849 PBP superfamily domain AANAER_0283 PF03462 PCRF domain AANAER_0283 PF00472 RF-1 domain AANAER_0284 PF01649 Ribosomal protein S20 AANAER_0285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AANAER_0285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AANAER_0285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AANAER_0285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AANAER_0286 PF01252 Signal peptidase (SPase) II AANAER_0287 PF00330 Aconitase family (aconitate hydratase) AANAER_0288 PF12804 MobA-like NTP transferase domain AANAER_0289 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_0294 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AANAER_0294 PF00384 Molybdopterin oxidoreductase AANAER_0294 PF01568 Molydopterin dinucleotide binding domain AANAER_0295 PF13247 4Fe-4S dicluster domain AANAER_0298 PF00453 Ribosomal protein L20 AANAER_0299 PF01632 Ribosomal protein L35 AANAER_0300 PF05198 Translation initiation factor IF-3, N-terminal domain AANAER_0300 PF00707 Translation initiation factor IF-3, C-terminal domain AANAER_0301 PF03129 Anticodon binding domain AANAER_0301 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AANAER_0301 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AANAER_0308 PF13288 DXP reductoisomerase C-terminal domain AANAER_0308 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AANAER_0308 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AANAER_0312 PF00814 Glycoprotease family AANAER_0314 PF03853 YjeF-related protein N-terminus AANAER_0314 PF01256 Carbohydrate kinase AANAER_0315 PF03091 CutA1 divalent ion tolerance protein AANAER_0316 PF05690 Thiazole biosynthesis protein ThiG AANAER_0319 PF02311 AraC-like ligand binding domain AANAER_0319 PF12833 Helix-turn-helix domain AANAER_0327 PF14278 Transcriptional regulator C-terminal region AANAER_0327 PF00440 Bacterial regulatory proteins, tetR family AANAER_0329 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AANAER_0329 PF00529 HlyD membrane-fusion protein of T1SS AANAER_0330 PF00873 AcrB/AcrD/AcrF family AANAER_0331 PF00210 Ferritin-like domain AANAER_0332 PF00391 PEP-utilising enzyme, mobile domain AANAER_0332 PF02896 PEP-utilising enzyme, TIM barrel domain AANAER_0332 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AANAER_0333 PF00690 Cation transporter/ATPase, N-terminus AANAER_0333 PF00689 Cation transporting ATPase, C-terminus AANAER_0334 PF00460 Flagella basal body rod protein AANAER_0334 PF07196 Flagellin hook IN motif AANAER_0337 PF02685 Glucokinase AANAER_0339 PF13493 Domain of unknown function (DUF4118) AANAER_0339 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0339 PF02702 Osmosensitive K+ channel His kinase sensor domain AANAER_0339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0342 PF01142 tRNA pseudouridine synthase D (TruD) AANAER_0343 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0343 PF17158 Membrane-associated sensor, integral membrane domain AANAER_0344 PF08447 PAS fold AANAER_0344 PF00989 PAS fold AANAER_0344 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0345 PF15437 Plasminogen-binding protein pgbA C-terminal AANAER_0347 PF13180 PDZ domain AANAER_0347 PF03572 Peptidase family S41 AANAER_0348 PF01259 SAICAR synthetase AANAER_0349 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AANAER_0352 PF01553 Acyltransferase AANAER_0353 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AANAER_0354 PF02416 mttA/Hcf106 family AANAER_0355 PF00750 tRNA synthetases class I (R) AANAER_0355 PF05746 DALR anticodon binding domain AANAER_0355 PF03485 Arginyl tRNA synthetase N terminal domain AANAER_0357 PF01467 Cytidylyltransferase-like AANAER_0358 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AANAER_0358 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AANAER_0359 PF00162 Phosphoglycerate kinase AANAER_0360 PF00121 Triosephosphate isomerase AANAER_0362 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AANAER_0362 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AANAER_0363 PF13344 Haloacid dehalogenase-like hydrolase AANAER_0364 PF01817 Chorismate mutase type II AANAER_0364 PF01842 ACT domain AANAER_0364 PF00800 Prephenate dehydratase AANAER_0365 PF00155 Aminotransferase class I and II AANAER_0366 PF02780 Transketolase, C-terminal domain AANAER_0366 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AANAER_0366 PF02779 Transketolase, pyrimidine binding domain AANAER_0369 PF02545 Maf-like protein AANAER_0372 PF00877 NlpC/P60 family AANAER_0373 PF00877 NlpC/P60 family AANAER_0375 PF12838 4Fe-4S dicluster domain AANAER_0376 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AANAER_0376 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AANAER_0376 PF00374 Nickel-dependent hydrogenase AANAER_0378 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AANAER_0380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AANAER_0380 PF00361 Proton-conducting membrane transporter AANAER_0380 PF13244 Domain of unknown function (DUF4040) AANAER_0382 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AANAER_0382 PF01411 tRNA synthetases class II (A) AANAER_0382 PF02272 DHHA1 domain AANAER_0383 PF00085 Thioredoxin AANAER_0384 PF03605 Anaerobic c4-dicarboxylate membrane transporter AANAER_0385 PF00989 PAS fold AANAER_0385 PF08447 PAS fold AANAER_0385 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0386 PF00486 Transcriptional regulatory protein, C terminal AANAER_0386 PF00072 Response regulator receiver domain AANAER_0387 PF00486 Transcriptional regulatory protein, C terminal AANAER_0387 PF00072 Response regulator receiver domain AANAER_0388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0388 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0388 PF00989 PAS fold AANAER_0389 PF00710 Asparaginase, N-terminal AANAER_0389 PF17763 Glutaminase/Asparaginase C-terminal domain AANAER_0390 PF03605 Anaerobic c4-dicarboxylate membrane transporter AANAER_0391 PF00206 Lyase AANAER_0391 PF10415 Fumarase C C-terminus AANAER_0393 PF13085 2Fe-2S iron-sulfur cluster binding domain AANAER_0393 PF13183 4Fe-4S dicluster domain AANAER_0394 PF02910 Fumarate reductase flavoprotein C-term AANAER_0394 PF00890 FAD binding domain AANAER_0395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AANAER_0396 PF01235 Sodium:alanine symporter family AANAER_0397 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_0398 PF01113 Dihydrodipicolinate reductase, N-terminus AANAER_0398 PF05173 Dihydrodipicolinate reductase, C-terminus AANAER_0399 PF00156 Phosphoribosyl transferase domain AANAER_0399 PF13537 Glutamine amidotransferase domain AANAER_0400 PF04055 Radical SAM superfamily AANAER_0400 PF16199 Radical_SAM C-terminal domain AANAER_0401 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AANAER_0401 PF03466 LysR substrate binding domain AANAER_0402 PF00580 UvrD/REP helicase N-terminal domain AANAER_0402 PF13361 UvrD-like helicase C-terminal domain AANAER_0403 PF01509 TruB family pseudouridylate synthase (N terminal domain) AANAER_0404 PF00288 GHMP kinases N terminal domain AANAER_0405 PF01668 SmpB protein AANAER_0406 PF00115 Cytochrome C and Quinol oxidase polypeptide I AANAER_0409 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AANAER_0409 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AANAER_0413 PF12705 PD-(D/E)XK nuclease superfamily AANAER_0414 PF05538 Campylobacter major outer membrane protein AANAER_0415 PF03462 PCRF domain AANAER_0415 PF00472 RF-1 domain AANAER_0417 PF05538 Campylobacter major outer membrane protein AANAER_0419 PF02660 Glycerol-3-phosphate acyltransferase AANAER_0420 PF02445 Quinolinate synthetase A protein AANAER_0421 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AANAER_0421 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AANAER_0424 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AANAER_0426 PF08544 GHMP kinases C terminal AANAER_0426 PF00288 GHMP kinases N terminal domain AANAER_0428 PF00009 Elongation factor Tu GTP binding domain AANAER_0428 PF04760 Translation initiation factor IF-2, N-terminal region AANAER_0428 PF11987 Translation-initiation factor 2 AANAER_0429 PF02033 Ribosome-binding factor A AANAER_0430 PF02576 RimP N-terminal domain AANAER_0431 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AANAER_0431 PF01872 RibD C-terminal domain AANAER_0434 PF08207 Elongation factor P (EF-P) KOW-like domain AANAER_0434 PF01132 Elongation factor P (EF-P) OB domain AANAER_0434 PF09285 Elongation factor P, C-terminal AANAER_0435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AANAER_0435 PF01842 ACT domain AANAER_0435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AANAER_0436 PF00575 S1 RNA binding domain AANAER_0437 PF02401 LytB protein AANAER_0438 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AANAER_0439 PF03484 tRNA synthetase B5 domain AANAER_0439 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AANAER_0439 PF01588 Putative tRNA binding domain AANAER_0439 PF03147 Ferredoxin-fold anticodon binding domain AANAER_0440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AANAER_0440 PF01409 tRNA synthetases class II core domain (F) AANAER_0441 PF01230 HIT domain AANAER_0442 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AANAER_0443 PF00109 Beta-ketoacyl synthase, N-terminal domain AANAER_0443 PF02801 Beta-ketoacyl synthase, C-terminal domain AANAER_0444 PF00550 Phosphopantetheine attachment site AANAER_0446 PF04055 Radical SAM superfamily AANAER_0448 PF06508 Queuosine biosynthesis protein QueC AANAER_0449 PF03453 MoeA N-terminal region (domain I and II) AANAER_0449 PF03454 MoeA C-terminal region (domain IV) AANAER_0449 PF00994 Probable molybdopterin binding domain AANAER_0454 PF00032 Cytochrome b(C-terminal)/b6/petD AANAER_0454 PF00033 Cytochrome b/b6/petB AANAER_0455 PF00355 Rieske [2Fe-2S] domain AANAER_0456 PF00291 Pyridoxal-phosphate dependent enzyme AANAER_0457 PF00696 Amino acid kinase family AANAER_0458 PF00072 Response regulator receiver domain AANAER_0458 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0459 PF00580 UvrD/REP helicase N-terminal domain AANAER_0459 PF13361 UvrD-like helicase C-terminal domain AANAER_0461 PF00119 ATP synthase A chain AANAER_0462 PF00291 Pyridoxal-phosphate dependent enzyme AANAER_0462 PF13291 ACT domain AANAER_0463 PF16226 Domain of unknown function (DUF4885) AANAER_0464 PF01717 Cobalamin-independent synthase, Catalytic domain AANAER_0464 PF08267 Cobalamin-independent synthase, N-terminal domain AANAER_0466 PF01746 tRNA (Guanine-1)-methyltransferase AANAER_0467 PF01245 Ribosomal protein L19 AANAER_0471 PF00005 ABC transporter AANAER_0472 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0473 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0474 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_0475 PF00072 Response regulator receiver domain AANAER_0475 PF13426 PAS domain AANAER_0475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0476 PF10417 C-terminal domain of 1-Cys peroxiredoxin AANAER_0476 PF00578 AhpC/TSA family AANAER_0477 PF09335 SNARE associated Golgi protein AANAER_0478 PF00106 short chain dehydrogenase AANAER_0480 PF01584 CheW-like domain AANAER_0480 PF07194 P2 response regulator binding domain AANAER_0480 PF01627 Hpt domain AANAER_0480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0480 PF02895 Signal transducing histidine kinase, homodimeric domain AANAER_0482 PF00072 Response regulator receiver domain AANAER_0483 PF07694 5TMR of 5TMR-LYT AANAER_0483 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0485 PF12821 Threonine/Serine exporter, ThrE AANAER_0486 PF06738 Putative threonine/serine exporter AANAER_0488 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0488 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0488 PF00989 PAS fold AANAER_0488 PF08447 PAS fold AANAER_0490 PF03309 Type III pantothenate kinase AANAER_0491 PF01634 ATP phosphoribosyltransferase AANAER_0493 PF06977 SdiA-regulated AANAER_0494 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0494 PF08448 PAS fold AANAER_0495 PF00579 tRNA synthetases class I (W and Y) AANAER_0499 PF02472 Biopolymer transport protein ExbD/TolR AANAER_0500 PF01618 MotA/TolQ/ExbB proton channel family AANAER_0501 PF01618 MotA/TolQ/ExbB proton channel family AANAER_0506 PF00593 TonB dependent receptor AANAER_0506 PF07715 TonB-dependent Receptor Plug Domain AANAER_0509 PF07715 TonB-dependent Receptor Plug Domain AANAER_0509 PF00593 TonB dependent receptor AANAER_0510 PF00072 Response regulator receiver domain AANAER_0510 PF12833 Helix-turn-helix domain AANAER_0511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0511 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0512 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AANAER_0512 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AANAER_0514 PF00873 AcrB/AcrD/AcrF family AANAER_0515 PF00593 TonB dependent receptor AANAER_0515 PF07715 TonB-dependent Receptor Plug Domain AANAER_0521 PF02403 Seryl-tRNA synthetase N-terminal domain AANAER_0521 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AANAER_0522 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0522 PF10442 FIST C domain AANAER_0522 PF08495 FIST N domain AANAER_0522 PF00563 EAL domain AANAER_0524 PF02885 Glycosyl transferase family, helical bundle domain AANAER_0524 PF00591 Glycosyl transferase family, a/b domain AANAER_0525 PF01810 LysE type translocator AANAER_0526 PF00005 ABC transporter AANAER_0527 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0528 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0529 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_0530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AANAER_0530 PF14824 Sirohaem biosynthesis protein central AANAER_0530 PF10414 Sirohaem synthase dimerisation region AANAER_0531 PF06463 Molybdenum Cofactor Synthesis C AANAER_0531 PF04055 Radical SAM superfamily AANAER_0533 PF00005 ABC transporter AANAER_0534 PF00312 Ribosomal protein S15 AANAER_0537 PF00484 Carbonic anhydrase AANAER_0538 PF00289 Biotin carboxylase, N-terminal domain AANAER_0538 PF02785 Biotin carboxylase C-terminal domain AANAER_0538 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AANAER_0539 PF12833 Helix-turn-helix domain AANAER_0540 PF00196 Bacterial regulatory proteins, luxR family AANAER_0540 PF00072 Response regulator receiver domain AANAER_0541 PF07568 Histidine kinase AANAER_0541 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0541 PF12282 Signal transduction histidine kinase AANAER_0543 PF01565 FAD binding domain AANAER_0543 PF02913 FAD linked oxidases, C-terminal domain AANAER_0545 PF00872 Transposase, Mutator family AANAER_0546 PF13426 PAS domain AANAER_0546 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0546 PF08447 PAS fold AANAER_0548 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0548 PF00672 HAMP domain AANAER_0548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0549 PF00072 Response regulator receiver domain AANAER_0549 PF00486 Transcriptional regulatory protein, C terminal AANAER_0550 PF00639 PPIC-type PPIASE domain AANAER_0551 PF01116 Fructose-bisphosphate aldolase class-II AANAER_0552 PF02472 Biopolymer transport protein ExbD/TolR AANAER_0553 PF01618 MotA/TolQ/ExbB proton channel family AANAER_0555 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0555 PF00989 PAS fold AANAER_0556 PF01202 Shikimate kinase AANAER_0557 PF00815 Histidinol dehydrogenase AANAER_0559 PF00348 Polyprenyl synthetase AANAER_0560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AANAER_0560 PF01488 Shikimate / quinate 5-dehydrogenase AANAER_0560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AANAER_0561 PF03129 Anticodon binding domain AANAER_0561 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AANAER_0561 PF04073 Aminoacyl-tRNA editing domain AANAER_0562 PF00924 Mechanosensitive ion channel AANAER_0562 PF05552 Conserved TM helix AANAER_0563 PF12627 Probable RNA and SrmB- binding site of polymerase A AANAER_0563 PF01743 Poly A polymerase head domain AANAER_0563 PF01966 HD domain AANAER_0564 PF05552 Conserved TM helix AANAER_0564 PF00924 Mechanosensitive ion channel AANAER_0566 PF02699 Preprotein translocase subunit AANAER_0567 PF02355 Protein export membrane protein AANAER_0568 PF07549 SecD/SecF GG Motif AANAER_0568 PF02355 Protein export membrane protein AANAER_0572 PF13603 Leucyl-tRNA synthetase, Domain 2 AANAER_0572 PF09334 tRNA synthetases class I (M) AANAER_0572 PF00133 tRNA synthetases class I (I, L, M and V) AANAER_0574 PF08245 Mur ligase middle domain AANAER_0574 PF02875 Mur ligase family, glutamate ligase domain AANAER_0575 PF04225 Opacity-associated protein A LysM-like domain AANAER_0575 PF01551 Peptidase family M23 AANAER_0578 PF00999 Sodium/hydrogen exchanger family AANAER_0578 PF02254 TrkA-N domain AANAER_0582 PF00005 ABC transporter AANAER_0582 PF12704 MacB-like periplasmic core domain AANAER_0582 PF02687 FtsX-like permease family AANAER_0584 PF07715 TonB-dependent Receptor Plug Domain AANAER_0584 PF00593 TonB dependent receptor AANAER_0588 PF00072 Response regulator receiver domain AANAER_0589 PF12282 Signal transduction histidine kinase AANAER_0589 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0589 PF07568 Histidine kinase AANAER_0593 PF03461 TRCF domain AANAER_0593 PF00271 Helicase conserved C-terminal domain AANAER_0593 PF17757 UvrB interaction domain AANAER_0593 PF00270 DEAD/DEAH box helicase AANAER_0593 PF02559 CarD-like/TRCF domain AANAER_0595 PF00486 Transcriptional regulatory protein, C terminal AANAER_0595 PF00072 Response regulator receiver domain AANAER_0598 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0598 PF02203 Tar ligand binding domain homologue AANAER_0598 PF00672 HAMP domain AANAER_0599 PF02954 Bacterial regulatory protein, Fis family AANAER_0599 PF00072 Response regulator receiver domain AANAER_0599 PF00158 Sigma-54 interaction domain AANAER_0600 PF07536 HWE histidine kinase AANAER_0600 PF13426 PAS domain AANAER_0600 PF13581 Histidine kinase-like ATPase domain AANAER_0601 PF00672 HAMP domain AANAER_0601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0601 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0602 PF13277 YmdB-like protein AANAER_0606 PF01209 ubiE/COQ5 methyltransferase family AANAER_0607 PF13742 OB-fold nucleic acid binding domain AANAER_0607 PF02601 Exonuclease VII, large subunit AANAER_0608 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0608 PF02203 Tar ligand binding domain homologue AANAER_0608 PF00672 HAMP domain AANAER_0609 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0609 PF08447 PAS fold AANAER_0610 PF01584 CheW-like domain AANAER_0611 PF00072 Response regulator receiver domain AANAER_0612 PF02954 Bacterial regulatory protein, Fis family AANAER_0612 PF00072 Response regulator receiver domain AANAER_0612 PF00158 Sigma-54 interaction domain AANAER_0613 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AANAER_0615 PF02261 Aspartate decarboxylase AANAER_0616 PF02575 YbaB/EbfC DNA-binding family AANAER_0617 PF00348 Polyprenyl synthetase AANAER_0618 PF00166 Chaperonin 10 Kd subunit AANAER_0619 PF00118 TCP-1/cpn60 chaperonin family AANAER_0620 PF00459 Inositol monophosphatase family AANAER_0621 PF01380 SIS domain AANAER_0622 PF02772 S-adenosylmethionine synthetase, central domain AANAER_0622 PF00438 S-adenosylmethionine synthetase, N-terminal domain AANAER_0622 PF02773 S-adenosylmethionine synthetase, C-terminal domain AANAER_0623 PF17848 Acetyl-coA carboxylase zinc finger domain AANAER_0623 PF01039 Carboxyl transferase domain AANAER_0624 PF02590 Predicted SPOUT methyltransferase AANAER_0625 PF01258 Prokaryotic dksA/traR C4-type zinc finger AANAER_0627 PF01207 Dihydrouridine synthase (Dus) AANAER_0629 PF01434 Peptidase family M41 AANAER_0629 PF00004 ATPase family associated with various cellular activities (AAA) AANAER_0629 PF17862 AAA+ lid domain AANAER_0631 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0632 PF00486 Transcriptional regulatory protein, C terminal AANAER_0632 PF00072 Response regulator receiver domain AANAER_0633 PF00669 Bacterial flagellin N-terminal helical region AANAER_0633 PF07196 Flagellin hook IN motif AANAER_0633 PF00700 Bacterial flagellin C-terminal helical region AANAER_0634 PF00682 HMGL-like AANAER_0634 PF08502 LeuA allosteric (dimerisation) domain AANAER_0635 PF02254 TrkA-N domain AANAER_0635 PF00999 Sodium/hydrogen exchanger family AANAER_0635 PF02080 TrkA-C domain AANAER_0636 PF02254 TrkA-N domain AANAER_0636 PF07885 Ion channel AANAER_0638 PF07556 Protein of unknown function (DUF1538) AANAER_0641 PF05192 MutS domain III AANAER_0641 PF05188 MutS domain II AANAER_0641 PF05190 MutS family domain IV AANAER_0641 PF01624 MutS domain I AANAER_0641 PF00488 MutS domain V AANAER_0643 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0643 PF07694 5TMR of 5TMR-LYT AANAER_0644 PF00977 Histidine biosynthesis protein AANAER_0645 PF11849 Domain of unknown function (DUF3369) AANAER_0646 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0646 PF00072 Response regulator receiver domain AANAER_0647 PF00117 Glutamine amidotransferase class-I AANAER_0650 PF00072 Response regulator receiver domain AANAER_0650 PF00486 Transcriptional regulatory protein, C terminal AANAER_0651 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0653 PF00156 Phosphoribosyl transferase domain AANAER_0655 PF01022 Bacterial regulatory protein, arsR family AANAER_0656 PF00403 Heavy-metal-associated domain AANAER_0658 PF00679 Elongation factor G C-terminus AANAER_0658 PF00009 Elongation factor Tu GTP binding domain AANAER_0658 PF03144 Elongation factor Tu domain 2 AANAER_0658 PF06421 GTP-binding protein LepA C-terminus AANAER_0659 PF05736 OprF membrane domain AANAER_0659 PF00691 OmpA family AANAER_0660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AANAER_0660 PF14572 Phosphoribosyl synthetase-associated domain AANAER_0661 PF07690 Major Facilitator Superfamily AANAER_0663 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AANAER_0664 PF00557 Metallopeptidase family M24 AANAER_0664 PF01321 Creatinase/Prolidase N-terminal domain AANAER_0665 PF01220 Dehydroquinase class II AANAER_0666 PF01979 Amidohydrolase family AANAER_0667 PF01343 Peptidase family S49 AANAER_0668 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0668 PF00989 PAS fold AANAER_0669 PF00486 Transcriptional regulatory protein, C terminal AANAER_0669 PF00072 Response regulator receiver domain AANAER_0670 PF13473 Cupredoxin-like domain AANAER_0670 PF18764 Nitrous oxide reductase propeller repeat AANAER_0670 PF18793 Nitrous oxide reductase propeller repeat 2 AANAER_0673 PF12838 4Fe-4S dicluster domain AANAER_0673 PF12800 4Fe-4S binding domain AANAER_0676 PF13237 4Fe-4S dicluster domain AANAER_0676 PF12801 4Fe-4S binding domain AANAER_0677 PF13732 Domain of unknown function (DUF4162) AANAER_0677 PF00005 ABC transporter AANAER_0683 PF01883 Iron-sulfur cluster assembly protein AANAER_0686 PF00270 DEAD/DEAH box helicase AANAER_0686 PF00271 Helicase conserved C-terminal domain AANAER_0687 PF00871 Acetokinase family AANAER_0688 PF01515 Phosphate acetyl/butaryl transferase AANAER_0689 PF00871 Acetokinase family AANAER_0690 PF01515 Phosphate acetyl/butaryl transferase AANAER_0693 PF00871 Acetokinase family AANAER_0694 PF11490 DNA polymerase III polC-type N-terminus II AANAER_0694 PF07733 Bacterial DNA polymerase III alpha NTPase domain AANAER_0694 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AANAER_0694 PF14579 Helix-hairpin-helix motif AANAER_0694 PF02811 PHP domain AANAER_0694 PF00929 Exonuclease AANAER_0696 PF00474 Sodium:solute symporter family AANAER_0698 PF00929 Exonuclease AANAER_0700 PF00474 Sodium:solute symporter family AANAER_0702 PF00072 Response regulator receiver domain AANAER_0702 PF00486 Transcriptional regulatory protein, C terminal AANAER_0703 PF00672 HAMP domain AANAER_0703 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0703 PF13426 PAS domain AANAER_0703 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0712 PF18146 Damage-inducible protein CinA KH domain AANAER_0712 PF00994 Probable molybdopterin binding domain AANAER_0712 PF02464 Competence-damaged protein AANAER_0713 PF06039 Malate:quinone oxidoreductase (Mqo) AANAER_0714 PF08264 Anticodon-binding domain of tRNA AANAER_0714 PF00133 tRNA synthetases class I (I, L, M and V) AANAER_0717 PF08245 Mur ligase middle domain AANAER_0717 PF02875 Mur ligase family, glutamate ligase domain AANAER_0721 PF01882 Protein of unknown function DUF58 AANAER_0722 PF07726 ATPase family associated with various cellular activities (AAA) AANAER_0722 PF17863 AAA lid domain AANAER_0723 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_0724 PF00318 Ribosomal protein S2 AANAER_0725 PF00889 Elongation factor TS AANAER_0726 PF00005 ABC transporter AANAER_0728 PF00625 Guanylate kinase AANAER_0729 PF01966 HD domain AANAER_0730 PF10442 FIST C domain AANAER_0730 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0730 PF00563 EAL domain AANAER_0730 PF08495 FIST N domain AANAER_0731 PF00403 Heavy-metal-associated domain AANAER_0734 PF00005 ABC transporter AANAER_0735 PF00762 Ferrochelatase AANAER_0738 PF01875 Memo-like protein AANAER_0739 PF00005 ABC transporter AANAER_0740 PF00950 ABC 3 transport family AANAER_0741 PF13509 S1 domain AANAER_0741 PF17783 CvfB-like winged helix domain AANAER_0742 PF08534 Redoxin AANAER_0743 PF00672 HAMP domain AANAER_0743 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0743 PF02203 Tar ligand binding domain homologue AANAER_0744 PF00580 UvrD/REP helicase N-terminal domain AANAER_0744 PF13361 UvrD-like helicase C-terminal domain AANAER_0745 PF10458 Valyl tRNA synthetase tRNA binding arm AANAER_0745 PF08264 Anticodon-binding domain of tRNA AANAER_0745 PF00133 tRNA synthetases class I (I, L, M and V) AANAER_0747 PF00464 Serine hydroxymethyltransferase AANAER_0748 PF12833 Helix-turn-helix domain AANAER_0748 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AANAER_0748 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AANAER_0748 PF02805 Metal binding domain of Ada AANAER_0749 PF00873 AcrB/AcrD/AcrF family AANAER_0753 PF07690 Major Facilitator Superfamily AANAER_0754 PF01725 Ham1 family AANAER_0759 PF13525 Outer membrane lipoprotein AANAER_0760 PF00004 ATPase family associated with various cellular activities (AAA) AANAER_0760 PF05362 Lon protease (S16) C-terminal proteolytic domain AANAER_0760 PF02190 ATP-dependent protease La (LON) substrate-binding domain AANAER_0763 PF00817 impB/mucB/samB family AANAER_0763 PF11798 IMS family HHH motif AANAER_0763 PF11799 impB/mucB/samB family C-terminal domain AANAER_0766 PF00989 PAS fold AANAER_0766 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0767 PF00924 Mechanosensitive ion channel AANAER_0771 PF00258 Flavodoxin AANAER_0773 PF10442 FIST C domain AANAER_0773 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0773 PF00563 EAL domain AANAER_0773 PF08495 FIST N domain AANAER_0776 PF03150 Di-haem cytochrome c peroxidase AANAER_0782 PF00403 Heavy-metal-associated domain AANAER_0793 PF02421 Ferrous iron transport protein B AANAER_0793 PF07670 Nucleoside recognition AANAER_0793 PF17910 FeoB cytosolic helical domain AANAER_0793 PF07664 Ferrous iron transport protein B C terminus AANAER_0793 PF04023 FeoA domain AANAER_0794 PF04023 FeoA domain AANAER_0795 PF00072 Response regulator receiver domain AANAER_0795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0795 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0795 PF09308 LuxQ, periplasmic AANAER_0796 PF02028 BCCT, betaine/carnitine/choline family transporter AANAER_0800 PF02203 Tar ligand binding domain homologue AANAER_0800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0800 PF00672 HAMP domain AANAER_0801 PF00137 ATP synthase subunit C AANAER_0805 PF18665 Tetracyclin repressor-like, C-terminal domain AANAER_0805 PF00440 Bacterial regulatory proteins, tetR family AANAER_0808 PF12833 Helix-turn-helix domain AANAER_0809 PF06965 Na+/H+ antiporter 1 AANAER_0810 PF01475 Ferric uptake regulator family AANAER_0812 PF03824 High-affinity nickel-transport protein AANAER_0813 PF00672 HAMP domain AANAER_0813 PF02203 Tar ligand binding domain homologue AANAER_0813 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0814 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_0815 PF01053 Cys/Met metabolism PLP-dependent enzyme AANAER_0816 PF01053 Cys/Met metabolism PLP-dependent enzyme AANAER_0817 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AANAER_0818 PF00034 Cytochrome c AANAER_0818 PF03150 Di-haem cytochrome c peroxidase AANAER_0819 PF01734 Patatin-like phospholipase AANAER_0821 PF01894 Uncharacterised protein family UPF0047 AANAER_0823 PF12833 Helix-turn-helix domain AANAER_0823 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AANAER_0823 PF02805 Metal binding domain of Ada AANAER_0823 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AANAER_0825 PF01883 Iron-sulfur cluster assembly protein AANAER_0826 PF02657 Fe-S metabolism associated domain AANAER_0827 PF00266 Aminotransferase class-V AANAER_0829 PF00005 ABC transporter AANAER_0830 PF01458 Uncharacterized protein family (UPF0051) AANAER_0831 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_0833 PF00266 Aminotransferase class-V AANAER_0834 PF04324 BFD-like [2Fe-2S] binding domain AANAER_0834 PF01106 NifU-like domain AANAER_0834 PF01592 NifU-like N terminal domain AANAER_0836 PF14698 Argininosuccinate lyase C-terminal AANAER_0836 PF00206 Lyase AANAER_0837 PF00072 Response regulator receiver domain AANAER_0838 PF00899 ThiF family AANAER_0839 PF03449 Transcription elongation factor, N-terminal AANAER_0839 PF01272 Transcription elongation factor, GreA/GreB, C-term AANAER_0840 PF01118 Semialdehyde dehydrogenase, NAD binding domain AANAER_0840 PF02774 Semialdehyde dehydrogenase, dimerisation domain AANAER_0843 PF03976 Polyphosphate kinase 2 (PPK2) AANAER_0844 PF17757 UvrB interaction domain AANAER_0844 PF00271 Helicase conserved C-terminal domain AANAER_0844 PF04851 Type III restriction enzyme, res subunit AANAER_0844 PF02151 UvrB/uvrC motif AANAER_0844 PF12344 Ultra-violet resistance protein B AANAER_0845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0845 PF13426 PAS domain AANAER_0845 PF08447 PAS fold AANAER_0846 PF10576 Iron-sulfur binding domain of endonuclease III AANAER_0846 PF00633 Helix-hairpin-helix motif AANAER_0846 PF00730 HhH-GPD superfamily base excision DNA repair protein AANAER_0847 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0847 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_0847 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0848 PF08495 FIST N domain AANAER_0848 PF00563 EAL domain AANAER_0848 PF10442 FIST C domain AANAER_0848 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0851 PF00486 Transcriptional regulatory protein, C terminal AANAER_0851 PF00072 Response regulator receiver domain AANAER_0860 PF02502 Ribose/Galactose Isomerase AANAER_0861 PF10502 Signal peptidase, peptidase S26 AANAER_0862 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AANAER_0862 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AANAER_0864 PF01386 Ribosomal L25p family AANAER_0864 PF14693 Ribosomal protein TL5, C-terminal domain AANAER_0865 PF01195 Peptidyl-tRNA hydrolase AANAER_0868 PF01520 N-acetylmuramoyl-L-alanine amidase AANAER_0868 PF11741 AMIN domain AANAER_0870 PF01479 S4 domain AANAER_0870 PF00579 tRNA synthetases class I (W and Y) AANAER_0871 PF02824 TGS domain AANAER_0871 PF04607 Region found in RelA / SpoT proteins AANAER_0871 PF13291 ACT domain AANAER_0872 PF01192 RNA polymerase Rpb6 AANAER_0873 PF00696 Amino acid kinase family AANAER_0875 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AANAER_0876 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AANAER_0877 PF00425 chorismate binding enzyme AANAER_0877 PF04715 Anthranilate synthase component I, N terminal region AANAER_0879 PF00464 Serine hydroxymethyltransferase AANAER_0880 PF00152 tRNA synthetases class II (D, K and N) AANAER_0880 PF01336 OB-fold nucleic acid binding domain AANAER_0882 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0882 PF08447 PAS fold AANAER_0882 PF00989 PAS fold AANAER_0882 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0883 PF04551 GcpE protein AANAER_0884 PF03796 DnaB-like helicase C terminal domain AANAER_0884 PF00772 DnaB-like helicase N terminal domain AANAER_0886 PF08645 Polynucleotide kinase 3 phosphatase AANAER_0887 PF00156 Phosphoribosyl transferase domain AANAER_0888 PF00291 Pyridoxal-phosphate dependent enzyme AANAER_0890 PF02789 Cytosol aminopeptidase family, N-terminal domain AANAER_0890 PF00883 Cytosol aminopeptidase family, catalytic domain AANAER_0891 PF00294 pfkB family carbohydrate kinase AANAER_0891 PF01467 Cytidylyltransferase-like AANAER_0893 PF06071 Protein of unknown function (DUF933) AANAER_0893 PF01926 50S ribosome-binding GTPase AANAER_0896 PF06865 Pyrimidine/purine nucleoside phosphorylase AANAER_0897 PF00486 Transcriptional regulatory protein, C terminal AANAER_0897 PF00072 Response regulator receiver domain AANAER_0899 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0899 PF00072 Response regulator receiver domain AANAER_0902 PF01142 tRNA pseudouridine synthase D (TruD) AANAER_0904 PF02203 Tar ligand binding domain homologue AANAER_0904 PF00672 HAMP domain AANAER_0904 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_0905 PF07499 RuvA, C-terminal domain AANAER_0905 PF01330 RuvA N terminal domain AANAER_0906 PF07478 D-ala D-ala ligase C-terminus AANAER_0906 PF01820 D-ala D-ala ligase N-terminus AANAER_0908 PF01225 Mur ligase family, catalytic domain AANAER_0908 PF08245 Mur ligase middle domain AANAER_0908 PF02875 Mur ligase family, glutamate ligase domain AANAER_0914 PF01266 FAD dependent oxidoreductase AANAER_0920 PF00338 Ribosomal protein S10p/S20e AANAER_0921 PF00297 Ribosomal protein L3 AANAER_0922 PF00573 Ribosomal protein L4/L1 family AANAER_0923 PF00276 Ribosomal protein L23 AANAER_0924 PF03947 Ribosomal Proteins L2, C-terminal domain AANAER_0924 PF00181 Ribosomal Proteins L2, RNA binding domain AANAER_0925 PF00203 Ribosomal protein S19 AANAER_0926 PF00237 Ribosomal protein L22p/L17e AANAER_0927 PF00189 Ribosomal protein S3, C-terminal domain AANAER_0927 PF07650 KH domain AANAER_0928 PF00252 Ribosomal protein L16p/L10e AANAER_0929 PF00831 Ribosomal L29 protein AANAER_0930 PF00366 Ribosomal protein S17 AANAER_0931 PF00238 Ribosomal protein L14p/L23e AANAER_0932 PF00467 KOW motif AANAER_0932 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AANAER_0933 PF00281 Ribosomal protein L5 AANAER_0933 PF00673 ribosomal L5P family C-terminus AANAER_0934 PF00253 Ribosomal protein S14p/S29e AANAER_0935 PF00410 Ribosomal protein S8 AANAER_0936 PF00347 Ribosomal protein L6 AANAER_0937 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AANAER_0938 PF03719 Ribosomal protein S5, C-terminal domain AANAER_0938 PF00333 Ribosomal protein S5, N-terminal domain AANAER_0939 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AANAER_0940 PF00344 SecY translocase AANAER_0941 PF00557 Metallopeptidase family M24 AANAER_0942 PF01176 Translation initiation factor 1A / IF-1 AANAER_0943 PF00990 Diguanylate cyclase, GGDEF domain AANAER_0947 PF02938 GAD domain AANAER_0947 PF00152 tRNA synthetases class II (D, K and N) AANAER_0947 PF01336 OB-fold nucleic acid binding domain AANAER_0950 PF08497 Radical SAM N-terminal AANAER_0950 PF04055 Radical SAM superfamily AANAER_0951 PF03190 Protein of unknown function, DUF255 AANAER_0956 PF01544 CorA-like Mg2+ transporter protein AANAER_0957 PF01769 Divalent cation transporter AANAER_0957 PF03448 MgtE intracellular N domain AANAER_0957 PF00571 CBS domain AANAER_0959 PF01168 Alanine racemase, N-terminal domain AANAER_0959 PF00842 Alanine racemase, C-terminal domain AANAER_0960 PF08459 UvrC Helix-hairpin-helix N-terminal AANAER_0960 PF02151 UvrB/uvrC motif AANAER_0960 PF01541 GIY-YIG catalytic domain AANAER_0962 PF13188 PAS domain AANAER_0962 PF00512 His Kinase A (phospho-acceptor) domain AANAER_0962 PF00989 PAS fold AANAER_0962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_0962 PF13426 PAS domain AANAER_0965 PF09345 Domain of unknown function (DUF1987) AANAER_0966 PF11849 Domain of unknown function (DUF3369) AANAER_0967 PF00872 Transposase, Mutator family AANAER_0973 PF01047 MarR family AANAER_0974 PF02321 Outer membrane efflux protein AANAER_0975 PF04632 Fusaric acid resistance protein family AANAER_0976 PF07869 Protein of unknown function (DUF1656) AANAER_0977 PF13533 Biotin-lipoyl like AANAER_0978 PF03466 LysR substrate binding domain AANAER_0978 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AANAER_0981 PF04607 Region found in RelA / SpoT proteins AANAER_0982 PF00183 Hsp90 protein AANAER_0984 PF00255 Glutathione peroxidase AANAER_0993 PF17871 AAA lid domain AANAER_0993 PF07724 AAA domain (Cdc48 subfamily) AANAER_0993 PF00004 ATPase family associated with various cellular activities (AAA) AANAER_0993 PF10431 C-terminal, D2-small domain, of ClpB protein AANAER_1000 PF00069 Protein kinase domain AANAER_1000 PF03793 PASTA domain AANAER_1001 PF05638 Type VI secretion system effector, Hcp AANAER_1002 PF04717 Type VI secretion system, phage-baseplate injector AANAER_1002 PF16671 Actin cross-linking domain AANAER_1005 PF04717 Type VI secretion system, phage-baseplate injector AANAER_1005 PF16671 Actin cross-linking domain AANAER_1015 PF00182 Chitinase class I AANAER_1021 PF00872 Transposase, Mutator family AANAER_1023 PF01551 Peptidase family M23 AANAER_1027 PF03781 Sulfatase-modifying factor enzyme 1 AANAER_1029 PF00226 DnaJ domain AANAER_1029 PF01556 DnaJ C terminal domain AANAER_1029 PF00684 DnaJ central domain AANAER_1031 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1031 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1032 PF01556 DnaJ C terminal domain AANAER_1032 PF00684 DnaJ central domain AANAER_1032 PF00226 DnaJ domain AANAER_1036 PF00034 Cytochrome c AANAER_1036 PF03150 Di-haem cytochrome c peroxidase AANAER_1037 PF00672 HAMP domain AANAER_1037 PF02203 Tar ligand binding domain homologue AANAER_1037 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_1038 PF03372 Endonuclease/Exonuclease/phosphatase family AANAER_1043 PF00072 Response regulator receiver domain AANAER_1043 PF09308 LuxQ, periplasmic AANAER_1043 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1044 PF03466 LysR substrate binding domain AANAER_1044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AANAER_1050 PF00005 ABC transporter AANAER_1051 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AANAER_1052 PF00210 Ferritin-like domain AANAER_1053 PF01368 DHH family AANAER_1053 PF02833 DHHA2 domain AANAER_1054 PF00958 GMP synthase C terminal domain AANAER_1054 PF13673 Acetyltransferase (GNAT) domain AANAER_1054 PF13302 Acetyltransferase (GNAT) domain AANAER_1054 PF00117 Glutamine amidotransferase class-I AANAER_1054 PF03352 Methyladenine glycosylase AANAER_1055 PF08448 PAS fold AANAER_1055 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1055 PF00563 EAL domain AANAER_1058 PF00593 TonB dependent receptor AANAER_1058 PF07715 TonB-dependent Receptor Plug Domain AANAER_1061 PF01844 HNH endonuclease AANAER_1061 PF17894 Topo homolgy domain in CRISPR-associated endonuclease Cas9 AANAER_1061 PF18525 Cas9 C-terminal domain AANAER_1061 PF17893 CRISPR-associated endonuclease Cas9 beta-hairpin domain AANAER_1061 PF18470 Cas9 alpha-helical lobe domain AANAER_1061 PF18541 RuvC endonuclease subdomain 3 AANAER_1063 PF09827 CRISPR associated protein Cas2 AANAER_1064 PF08713 DNA alkylation repair enzyme AANAER_1065 PF04073 Aminoacyl-tRNA editing domain AANAER_1066 PF05088 Bacterial NAD-glutamate dehydrogenase AANAER_1068 PF08443 RimK-like ATP-grasp domain AANAER_1068 PF18030 RimK PreATP-grasp domain AANAER_1072 PF00563 EAL domain AANAER_1072 PF01590 GAF domain AANAER_1072 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1072 PF00360 Phytochrome region AANAER_1075 PF03746 LamB/YcsF family AANAER_1077 PF02626 Carboxyltransferase domain, subdomain A and B AANAER_1079 PF10442 FIST C domain AANAER_1079 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1079 PF08495 FIST N domain AANAER_1079 PF00563 EAL domain AANAER_1081 PF03880 DbpA RNA binding domain AANAER_1081 PF00270 DEAD/DEAH box helicase AANAER_1081 PF00271 Helicase conserved C-terminal domain AANAER_1084 PF01966 HD domain AANAER_1085 PF02562 PhoH-like protein AANAER_1087 PF13406 Transglycosylase SLT domain AANAER_1088 PF02600 Disulfide bond formation protein DsbB AANAER_1089 PF08534 Redoxin AANAER_1095 PF13419 Haloacid dehalogenase-like hydrolase AANAER_1097 PF03641 Possible lysine decarboxylase AANAER_1102 PF01709 Transcriptional regulator AANAER_1104 PF00892 EamA-like transporter family AANAER_1106 PF11791 Aconitate B N-terminal domain AANAER_1106 PF00330 Aconitase family (aconitate hydratase) AANAER_1106 PF06434 Aconitate hydratase 2 N-terminus AANAER_1108 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AANAER_1108 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AANAER_1110 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AANAER_1110 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AANAER_1110 PF10518 TAT (twin-arginine translocation) pathway signal sequence AANAER_1111 PF00374 Nickel-dependent hydrogenase AANAER_1112 PF01292 Prokaryotic cytochrome b561 AANAER_1113 PF01750 Hydrogenase maturation protease AANAER_1115 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AANAER_1115 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AANAER_1115 PF10518 TAT (twin-arginine translocation) pathway signal sequence AANAER_1116 PF00374 Nickel-dependent hydrogenase AANAER_1117 PF01292 Prokaryotic cytochrome b561 AANAER_1118 PF01750 Hydrogenase maturation protease AANAER_1121 PF17788 HypF Kae1-like domain AANAER_1121 PF00708 Acylphosphatase AANAER_1121 PF07503 HypF finger AANAER_1121 PF01300 Telomere recombination AANAER_1122 PF00209 Sodium:neurotransmitter symporter family AANAER_1123 PF12823 Domain of unknown function (DUF3817) AANAER_1125 PF02492 CobW/HypB/UreG, nucleotide-binding domain AANAER_1126 PF01455 HupF/HypC family AANAER_1127 PF01924 Hydrogenase formation hypA family AANAER_1128 PF02540 NAD synthase AANAER_1128 PF00958 GMP synthase C terminal domain AANAER_1128 PF00117 Glutamine amidotransferase class-I AANAER_1129 PF00586 AIR synthase related protein, N-terminal domain AANAER_1129 PF02769 AIR synthase related protein, C-terminal domain AANAER_1130 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AANAER_1132 PF02653 Branched-chain amino acid transport system / permease component AANAER_1133 PF11862 Domain of unknown function (DUF3382) AANAER_1133 PF02653 Branched-chain amino acid transport system / permease component AANAER_1134 PF12399 Branched-chain amino acid ATP-binding cassette transporter AANAER_1134 PF00005 ABC transporter AANAER_1135 PF00005 ABC transporter AANAER_1140 PF18074 Primosomal protein N C-terminal domain AANAER_1140 PF17764 3′ DNA-binding domain (3′BD) AANAER_1140 PF00270 DEAD/DEAH box helicase AANAER_1140 PF00271 Helicase conserved C-terminal domain AANAER_1140 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AANAER_1141 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AANAER_1141 PF14602 Hexapeptide repeat of succinyl-transferase AANAER_1142 PF07694 5TMR of 5TMR-LYT AANAER_1142 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1145 PF00005 ABC transporter AANAER_1146 PF02390 Putative methyltransferase AANAER_1147 PF00128 Alpha amylase, catalytic domain AANAER_1147 PF02903 Alpha amylase, N-terminal ig-like domain AANAER_1148 PF00849 RNA pseudouridylate synthase AANAER_1148 PF01479 S4 domain AANAER_1149 PF01098 Cell cycle protein AANAER_1150 PF00491 Arginase family AANAER_1155 PF00202 Aminotransferase class-III AANAER_1156 PF06865 Pyrimidine/purine nucleoside phosphorylase AANAER_1160 PF04545 Sigma-70, region 4 AANAER_1160 PF04539 Sigma-70 region 3 AANAER_1160 PF00140 Sigma-70 factor, region 1.2 AANAER_1160 PF04542 Sigma-70 region 2 AANAER_1161 PF00694 Aconitase C-terminal domain AANAER_1162 PF00180 Isocitrate/isopropylmalate dehydrogenase AANAER_1164 PF00444 Ribosomal protein L36 AANAER_1165 PF00416 Ribosomal protein S13/S18 AANAER_1166 PF00411 Ribosomal protein S11 AANAER_1167 PF00163 Ribosomal protein S4/S9 N-terminal domain AANAER_1167 PF01479 S4 domain AANAER_1168 PF01000 RNA polymerase Rpb3/RpoA insert domain AANAER_1168 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AANAER_1168 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AANAER_1169 PF01196 Ribosomal protein L17 AANAER_1170 PF01425 Amidase AANAER_1171 PF00478 IMP dehydrogenase / GMP reductase domain AANAER_1171 PF00571 CBS domain AANAER_1183 PF01810 LysE type translocator AANAER_1190 PF00580 UvrD/REP helicase N-terminal domain AANAER_1190 PF13361 UvrD-like helicase C-terminal domain AANAER_1191 PF07690 Major Facilitator Superfamily AANAER_1192 PF00529 HlyD membrane-fusion protein of T1SS AANAER_1192 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AANAER_1193 PF00440 Bacterial regulatory proteins, tetR family AANAER_1195 PF07883 Cupin domain AANAER_1196 PF00258 Flavodoxin AANAER_1197 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AANAER_1197 PF00384 Molybdopterin oxidoreductase AANAER_1197 PF01568 Molydopterin dinucleotide binding domain AANAER_1199 PF13247 4Fe-4S dicluster domain AANAER_1200 PF13188 PAS domain AANAER_1200 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1200 PF08448 PAS fold AANAER_1200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1200 PF00072 Response regulator receiver domain AANAER_1201 PF00072 Response regulator receiver domain AANAER_1201 PF00486 Transcriptional regulatory protein, C terminal AANAER_1202 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AANAER_1203 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AANAER_1204 PF03641 Possible lysine decarboxylase AANAER_1208 PF01810 LysE type translocator AANAER_1209 PF00962 Adenosine/AMP deaminase AANAER_1211 PF01053 Cys/Met metabolism PLP-dependent enzyme AANAER_1212 PF00561 alpha/beta hydrolase fold AANAER_1214 PF04002 RadC-like JAB domain AANAER_1217 PF12161 HsdM N-terminal domain AANAER_1217 PF02384 N-6 DNA Methylase AANAER_1218 PF01420 Type I restriction modification DNA specificity domain AANAER_1223 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AANAER_1223 PF18766 SWI2/SNF2 ATPase AANAER_1223 PF12008 Type I restriction and modification enzyme - subunit R C terminal AANAER_1224 PF00899 ThiF family AANAER_1225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AANAER_1225 PF02142 MGS-like domain AANAER_1225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AANAER_1227 PF00196 Bacterial regulatory proteins, luxR family AANAER_1227 PF00072 Response regulator receiver domain AANAER_1230 PF03412 Peptidase C39 family AANAER_1230 PF00005 ABC transporter AANAER_1230 PF00664 ABC transporter transmembrane region AANAER_1233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1233 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1233 PF00989 PAS fold AANAER_1233 PF08447 PAS fold AANAER_1234 PF03861 ANTAR domain AANAER_1234 PF00072 Response regulator receiver domain AANAER_1235 PF00691 OmpA family AANAER_1235 PF13505 Outer membrane protein beta-barrel domain AANAER_1238 PF17874 MalT-like TPR region AANAER_1238 PF00196 Bacterial regulatory proteins, luxR family AANAER_1243 PF02954 Bacterial regulatory protein, Fis family AANAER_1243 PF00072 Response regulator receiver domain AANAER_1243 PF00158 Sigma-54 interaction domain AANAER_1244 PF07568 Histidine kinase AANAER_1244 PF12282 Signal transduction histidine kinase AANAER_1244 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1246 PF02332 Methane/Phenol/Toluene Hydroxylase AANAER_1247 PF02406 MmoB/DmpM family AANAER_1248 PF04945 YHS domain AANAER_1248 PF02332 Methane/Phenol/Toluene Hydroxylase AANAER_1250 PF00111 2Fe-2S iron-sulfur cluster binding domain AANAER_1250 PF00970 Oxidoreductase FAD-binding domain AANAER_1250 PF00175 Oxidoreductase NAD-binding domain AANAER_1251 PF00072 Response regulator receiver domain AANAER_1252 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1252 PF12282 Signal transduction histidine kinase AANAER_1252 PF07568 Histidine kinase AANAER_1253 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AANAER_1253 PF00056 lactate/malate dehydrogenase, NAD binding domain AANAER_1254 PF00175 Oxidoreductase NAD-binding domain AANAER_1254 PF00111 2Fe-2S iron-sulfur cluster binding domain AANAER_1254 PF00970 Oxidoreductase FAD-binding domain AANAER_1255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AANAER_1256 PF03928 Haem-degrading AANAER_1257 PF00171 Aldehyde dehydrogenase family AANAER_1258 PF01557 Fumarylacetoacetate (FAA) hydrolase family AANAER_1259 PF01118 Semialdehyde dehydrogenase, NAD binding domain AANAER_1259 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AANAER_1260 PF00682 HMGL-like AANAER_1260 PF07836 DmpG-like communication domain AANAER_1262 PF01361 Tautomerase enzyme AANAER_1263 PF00561 alpha/beta hydrolase fold AANAER_1266 PF01842 ACT domain AANAER_1266 PF01817 Chorismate mutase type II AANAER_1266 PF00800 Prephenate dehydratase AANAER_1267 PF00884 Sulfatase AANAER_1268 PF08019 Phosphoethanolamine transferase EptA/EptB AANAER_1268 PF00884 Sulfatase AANAER_1271 PF01475 Ferric uptake regulator family AANAER_1272 PF01925 Sulfite exporter TauE/SafE AANAER_1273 PF13462 Thioredoxin AANAER_1274 PF01761 3-dehydroquinate synthase AANAER_1276 PF04055 Radical SAM superfamily AANAER_1276 PF00919 Uncharacterized protein family UPF0004 AANAER_1277 PF01434 Peptidase family M41 AANAER_1277 PF06480 FtsH Extracellular AANAER_1277 PF17862 AAA+ lid domain AANAER_1277 PF00004 ATPase family associated with various cellular activities (AAA) AANAER_1279 PF00994 Probable molybdopterin binding domain AANAER_1280 PF00939 Sodium:sulfate symporter transmembrane region AANAER_1281 PF12833 Helix-turn-helix domain AANAER_1283 PF07836 DmpG-like communication domain AANAER_1283 PF00682 HMGL-like AANAER_1284 PF02203 Tar ligand binding domain homologue AANAER_1284 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_1284 PF00672 HAMP domain AANAER_1285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_1285 PF08447 PAS fold AANAER_1286 PF01713 Smr domain AANAER_1286 PF00488 MutS domain V AANAER_1290 PF03466 LysR substrate binding domain AANAER_1290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AANAER_1291 PF03601 Conserved hypothetical protein 698 AANAER_1292 PF01925 Sulfite exporter TauE/SafE AANAER_1293 PF07687 Peptidase dimerisation domain AANAER_1293 PF01546 Peptidase family M20/M25/M40 AANAER_1296 PF00486 Transcriptional regulatory protein, C terminal AANAER_1296 PF00072 Response regulator receiver domain AANAER_1299 PF02627 Carboxymuconolactone decarboxylase family AANAER_1301 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1301 PF00072 Response regulator receiver domain AANAER_1303 PF00392 Bacterial regulatory proteins, gntR family AANAER_1303 PF00155 Aminotransferase class I and II AANAER_1305 PF03992 Antibiotic biosynthesis monooxygenase AANAER_1311 PF00578 AhpC/TSA family AANAER_1311 PF10417 C-terminal domain of 1-Cys peroxiredoxin AANAER_1314 PF00593 TonB dependent receptor AANAER_1314 PF07660 Secretin and TonB N terminus short domain AANAER_1314 PF07715 TonB-dependent Receptor Plug Domain AANAER_1315 PF01625 Peptide methionine sulfoxide reductase AANAER_1317 PF00155 Aminotransferase class I and II AANAER_1317 PF00392 Bacterial regulatory proteins, gntR family AANAER_1319 PF03473 MOSC domain AANAER_1320 PF01161 Phosphatidylethanolamine-binding protein AANAER_1325 PF03831 PhnA domain AANAER_1325 PF08274 PhnA Zinc-Ribbon AANAER_1326 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AANAER_1327 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_1327 PF02203 Tar ligand binding domain homologue AANAER_1327 PF00672 HAMP domain AANAER_1332 PF01638 HxlR-like helix-turn-helix AANAER_1334 PF02525 Flavodoxin-like fold AANAER_1335 PF00881 Nitroreductase family AANAER_1336 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AANAER_1338 PF12833 Helix-turn-helix domain AANAER_1339 PF02568 Thiamine biosynthesis protein (ThiI) AANAER_1339 PF02926 THUMP domain AANAER_1341 PF01389 OmpA-like transmembrane domain AANAER_1341 PF00691 OmpA family AANAER_1342 PF00313 'Cold-shock' DNA-binding domain AANAER_1343 PF08212 Lipocalin-like domain AANAER_1345 PF01243 Pyridoxamine 5'-phosphate oxidase AANAER_1345 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AANAER_1348 PF02581 Thiamine monophosphate synthase AANAER_1349 PF08543 Phosphomethylpyrimidine kinase AANAER_1350 PF00690 Cation transporter/ATPase, N-terminus AANAER_1350 PF00689 Cation transporting ATPase, C-terminus AANAER_1351 PF12848 ABC transporter AANAER_1351 PF00005 ABC transporter AANAER_1352 PF03061 Thioesterase superfamily AANAER_1353 PF00072 Response regulator receiver domain AANAER_1354 PF03120 NAD-dependent DNA ligase OB-fold domain AANAER_1354 PF12826 Helix-hairpin-helix motif AANAER_1354 PF00533 BRCA1 C Terminus (BRCT) domain AANAER_1354 PF01653 NAD-dependent DNA ligase adenylation domain AANAER_1355 PF12697 Alpha/beta hydrolase family AANAER_1355 PF08241 Methyltransferase domain AANAER_1358 PF00672 HAMP domain AANAER_1358 PF02203 Tar ligand binding domain homologue AANAER_1358 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_1360 PF01654 Cytochrome bd terminal oxidase subunit I AANAER_1363 PF10415 Fumarase C C-terminus AANAER_1363 PF00206 Lyase AANAER_1365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1365 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1365 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_1366 PF07687 Peptidase dimerisation domain AANAER_1366 PF01546 Peptidase family M20/M25/M40 AANAER_1367 PF01613 Flavin reductase like domain AANAER_1368 PF02386 Cation transport protein AANAER_1369 PF02080 TrkA-C domain AANAER_1369 PF02254 TrkA-N domain AANAER_1370 PF00107 Zinc-binding dehydrogenase AANAER_1370 PF08240 Alcohol dehydrogenase GroES-like domain AANAER_1375 PF01575 MaoC like domain AANAER_1376 PF13193 AMP-binding enzyme C-terminal domain AANAER_1376 PF00501 AMP-binding enzyme AANAER_1378 PF09339 IclR helix-turn-helix domain AANAER_1378 PF01614 Bacterial transcriptional regulator AANAER_1379 PF04055 Radical SAM superfamily AANAER_1380 PF03099 Biotin/lipoate A/B protein ligase family AANAER_1381 PF00456 Transketolase, thiamine diphosphate binding domain AANAER_1381 PF17831 Pyruvate dehydrogenase E1 component middle domain AANAER_1382 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AANAER_1382 PF02817 e3 binding domain AANAER_1382 PF00364 Biotin-requiring enzyme AANAER_1383 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AANAER_1383 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_1385 PF08241 Methyltransferase domain AANAER_1388 PF00155 Aminotransferase class I and II AANAER_1389 PF00486 Transcriptional regulatory protein, C terminal AANAER_1389 PF00072 Response regulator receiver domain AANAER_1392 PF00005 ABC transporter AANAER_1392 PF16326 ABC transporter C-terminal domain AANAER_1392 PF12848 ABC transporter AANAER_1394 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1395 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1396 PF00072 Response regulator receiver domain AANAER_1396 PF00486 Transcriptional regulatory protein, C terminal AANAER_1397 PF05140 ResB-like family AANAER_1397 PF01578 Cytochrome C assembly protein AANAER_1398 PF08003 Protein of unknown function (DUF1698) AANAER_1399 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1400 PF01590 GAF domain AANAER_1400 PF00360 Phytochrome region AANAER_1400 PF00563 EAL domain AANAER_1400 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1401 PF00753 Metallo-beta-lactamase superfamily AANAER_1402 PF04305 Protein of unknown function (DUF455) AANAER_1404 PF00005 ABC transporter AANAER_1406 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_1409 PF05861 Bacterial phosphonate metabolism protein (PhnI) AANAER_1410 PF06007 Phosphonate metabolism protein PhnJ AANAER_1411 PF00005 ABC transporter AANAER_1412 PF00005 ABC transporter AANAER_1413 PF07969 Amidohydrolase family AANAER_1414 PF00132 Bacterial transferase hexapeptide (six repeats) AANAER_1415 PF00625 Guanylate kinase AANAER_1416 PF00753 Metallo-beta-lactamase superfamily AANAER_1416 PF12706 Beta-lactamase superfamily domain AANAER_1417 PF00291 Pyridoxal-phosphate dependent enzyme AANAER_1418 PF00684 DnaJ central domain AANAER_1418 PF01556 DnaJ C terminal domain AANAER_1418 PF00226 DnaJ domain AANAER_1419 PF13662 Toprim domain AANAER_1419 PF02132 RecR protein AANAER_1421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1421 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1421 PF00989 PAS fold AANAER_1421 PF08447 PAS fold AANAER_1424 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1425 PF01966 HD domain AANAER_1427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1427 PF00989 PAS fold AANAER_1427 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1428 PF00072 Response regulator receiver domain AANAER_1428 PF00486 Transcriptional regulatory protein, C terminal AANAER_1429 PF08279 HTH domain AANAER_1429 PF00072 Response regulator receiver domain AANAER_1431 PF00132 Bacterial transferase hexapeptide (six repeats) AANAER_1432 PF00764 Arginosuccinate synthase AANAER_1434 PF00591 Glycosyl transferase family, a/b domain AANAER_1434 PF02885 Glycosyl transferase family, helical bundle domain AANAER_1435 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AANAER_1436 PF00005 ABC transporter AANAER_1436 PF12399 Branched-chain amino acid ATP-binding cassette transporter AANAER_1437 PF00072 Response regulator receiver domain AANAER_1437 PF00486 Transcriptional regulatory protein, C terminal AANAER_1438 PF02348 Cytidylyltransferase AANAER_1439 PF13188 PAS domain AANAER_1439 PF00072 Response regulator receiver domain AANAER_1439 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1439 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1439 PF08448 PAS fold AANAER_1440 PF00476 DNA polymerase family A AANAER_1440 PF01612 3'-5' exonuclease AANAER_1440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AANAER_1440 PF01367 5'-3' exonuclease, C-terminal SAM fold AANAER_1441 PF00158 Sigma-54 interaction domain AANAER_1441 PF00072 Response regulator receiver domain AANAER_1441 PF02954 Bacterial regulatory protein, Fis family AANAER_1444 PF00158 Sigma-54 interaction domain AANAER_1444 PF00072 Response regulator receiver domain AANAER_1444 PF02954 Bacterial regulatory protein, Fis family AANAER_1445 PF01790 Prolipoprotein diacylglyceryl transferase AANAER_1446 PF13183 4Fe-4S dicluster domain AANAER_1446 PF02754 Cysteine-rich domain AANAER_1446 PF02665 Nitrate reductase gamma subunit AANAER_1447 PF06969 HemN C-terminal domain AANAER_1447 PF04055 Radical SAM superfamily AANAER_1448 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AANAER_1448 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AANAER_1454 PF00890 FAD binding domain AANAER_1454 PF14537 Cytochrome c3 AANAER_1455 PF00072 Response regulator receiver domain AANAER_1455 PF00486 Transcriptional regulatory protein, C terminal AANAER_1456 PF00072 Response regulator receiver domain AANAER_1456 PF00486 Transcriptional regulatory protein, C terminal AANAER_1457 PF13426 PAS domain AANAER_1457 PF01740 STAS domain AANAER_1458 PF00490 Delta-aminolevulinic acid dehydratase AANAER_1459 PF00925 GTP cyclohydrolase II AANAER_1460 PF02527 rRNA small subunit methyltransferase G AANAER_1466 PF02092 Glycyl-tRNA synthetase beta subunit AANAER_1477 PF01807 CHC2 zinc finger AANAER_1477 PF13662 Toprim domain AANAER_1477 PF08275 DNA primase catalytic core, N-terminal domain AANAER_1477 PF16730 DnaG-primase C-terminal, helicase-binding domain AANAER_1497 PF06745 KaiC AANAER_1497 PF18073 Rubredoxin metal binding domain AANAER_1500 PF00436 Single-strand binding protein family AANAER_1537 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AANAER_1537 PF00925 GTP cyclohydrolase II AANAER_1539 PF01293 Phosphoenolpyruvate carboxykinase AANAER_1540 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AANAER_1541 PF00364 Biotin-requiring enzyme AANAER_1541 PF00682 HMGL-like AANAER_1541 PF02436 Conserved carboxylase domain AANAER_1542 PF04277 Oxaloacetate decarboxylase, gamma chain AANAER_1545 PF01588 Putative tRNA binding domain AANAER_1545 PF09334 tRNA synthetases class I (M) AANAER_1545 PF00133 tRNA synthetases class I (I, L, M and V) AANAER_1547 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AANAER_1551 PF02325 YGGT family AANAER_1552 PF00749 tRNA synthetases class I (E and Q), catalytic domain AANAER_1553 PF05193 Peptidase M16 inactive domain AANAER_1554 PF04055 Radical SAM superfamily AANAER_1555 PF01103 Surface antigen AANAER_1555 PF07244 Surface antigen variable number repeat AANAER_1556 PF02153 Prephenate dehydrogenase AANAER_1556 PF01842 ACT domain AANAER_1557 PF00809 Pterin binding enzyme AANAER_1560 PF00696 Amino acid kinase family AANAER_1560 PF13840 ACT domain AANAER_1560 PF01842 ACT domain AANAER_1561 PF00293 NUDIX domain AANAER_1562 PF06969 HemN C-terminal domain AANAER_1562 PF04055 Radical SAM superfamily AANAER_1563 PF05175 Methyltransferase small domain AANAER_1563 PF17827 PrmC N-terminal domain AANAER_1564 PF01432 Peptidase family M3 AANAER_1569 PF00011 Hsp20/alpha crystallin family AANAER_1570 PF00011 Hsp20/alpha crystallin family AANAER_1571 PF18644 Phage integrase SAM-like domain AANAER_1571 PF00589 Phage integrase family AANAER_1572 PF00072 Response regulator receiver domain AANAER_1572 PF01339 CheB methylesterase AANAER_1573 PF03975 CheD chemotactic sensory transduction AANAER_1574 PF03705 CheR methyltransferase, all-alpha domain AANAER_1574 PF01739 CheR methyltransferase, SAM binding domain AANAER_1575 PF09078 CheY binding AANAER_1575 PF01627 Hpt domain AANAER_1575 PF01584 CheW-like domain AANAER_1575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1575 PF02895 Signal transducing histidine kinase, homodimeric domain AANAER_1576 PF00072 Response regulator receiver domain AANAER_1577 PF01138 3' exoribonuclease family, domain 1 AANAER_1577 PF03725 3' exoribonuclease family, domain 2 AANAER_1577 PF00013 KH domain AANAER_1577 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AANAER_1577 PF00575 S1 RNA binding domain AANAER_1579 PF03968 OstA-like protein AANAER_1579 PF04453 LPS transport system D AANAER_1581 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AANAER_1581 PF02843 Phosphoribosylglycinamide synthetase, C domain AANAER_1581 PF02844 Phosphoribosylglycinamide synthetase, N domain AANAER_1583 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AANAER_1583 PF01926 50S ribosome-binding GTPase AANAER_1584 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AANAER_1584 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AANAER_1586 PF00460 Flagella basal body rod protein AANAER_1586 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AANAER_1586 PF07559 Flagellar basal body protein FlaE AANAER_1587 PF00700 Bacterial flagellin C-terminal helical region AANAER_1587 PF00669 Bacterial flagellin N-terminal helical region AANAER_1588 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AANAER_1588 PF00460 Flagella basal body rod protein AANAER_1588 PF07559 Flagellar basal body protein FlaE AANAER_1588 PF07196 Flagellin hook IN motif AANAER_1591 PF00072 Response regulator receiver domain AANAER_1591 PF00486 Transcriptional regulatory protein, C terminal AANAER_1592 PF09397 Ftsk gamma domain AANAER_1592 PF01580 FtsK/SpoIIIE family AANAER_1592 PF17854 FtsK alpha domain AANAER_1593 PF00132 Bacterial transferase hexapeptide (six repeats) AANAER_1593 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AANAER_1594 PF10369 Small subunit of acetolactate synthase AANAER_1595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AANAER_1595 PF00205 Thiamine pyrophosphate enzyme, central domain AANAER_1595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AANAER_1597 PF02541 Ppx/GppA phosphatase family AANAER_1599 PF17158 Membrane-associated sensor, integral membrane domain AANAER_1599 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1600 PF01740 STAS domain AANAER_1600 PF00916 Sulfate permease family AANAER_1603 PF00085 Thioredoxin AANAER_1606 PF01171 PP-loop family AANAER_1608 PF07729 FCD domain AANAER_1608 PF00392 Bacterial regulatory proteins, gntR family AANAER_1609 PF05544 Proline racemase AANAER_1611 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_1612 PF01266 FAD dependent oxidoreductase AANAER_1613 PF05544 Proline racemase AANAER_1614 PF02423 Ornithine cyclodeaminase/mu-crystallin family AANAER_1615 PF00171 Aldehyde dehydrogenase family AANAER_1616 PF00701 Dihydrodipicolinate synthetase family AANAER_1634 PF00174 Oxidoreductase molybdopterin binding domain AANAER_1635 PF03453 MoeA N-terminal region (domain I and II) AANAER_1635 PF00994 Probable molybdopterin binding domain AANAER_1635 PF03454 MoeA C-terminal region (domain IV) AANAER_1636 PF02646 RmuC family AANAER_1637 PF16491 CAAX prenyl protease N-terminal, five membrane helices AANAER_1637 PF01435 Peptidase family M48 AANAER_1638 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1638 PF07694 5TMR of 5TMR-LYT AANAER_1639 PF03061 Thioesterase superfamily AANAER_1641 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1641 PF00989 PAS fold AANAER_1641 PF08447 PAS fold AANAER_1641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1642 PF08386 TAP-like protein AANAER_1642 PF00561 alpha/beta hydrolase fold AANAER_1643 PF02203 Tar ligand binding domain homologue AANAER_1643 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_1643 PF00672 HAMP domain AANAER_1645 PF00072 Response regulator receiver domain AANAER_1645 PF00486 Transcriptional regulatory protein, C terminal AANAER_1646 PF00248 Aldo/keto reductase family AANAER_1651 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AANAER_1651 PF07685 CobB/CobQ-like glutamine amidotransferase domain AANAER_1655 PF07685 CobB/CobQ-like glutamine amidotransferase domain AANAER_1655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AANAER_1655 PF00155 Aminotransferase class I and II AANAER_1656 PF03186 CobD/Cbib protein AANAER_1657 PF01032 FecCD transport family AANAER_1658 PF00005 ABC transporter AANAER_1660 PF07715 TonB-dependent Receptor Plug Domain AANAER_1660 PF00593 TonB dependent receptor AANAER_1662 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_1662 PF00672 HAMP domain AANAER_1662 PF12729 Four helix bundle sensory module for signal transduction AANAER_1665 PF13419 Haloacid dehalogenase-like hydrolase AANAER_1666 PF01966 HD domain AANAER_1666 PF13286 Phosphohydrolase-associated domain AANAER_1668 PF13426 PAS domain AANAER_1668 PF00672 HAMP domain AANAER_1668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1668 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1669 PF00486 Transcriptional regulatory protein, C terminal AANAER_1669 PF00072 Response regulator receiver domain AANAER_1672 PF00588 SpoU rRNA Methylase family AANAER_1673 PF01842 ACT domain AANAER_1673 PF00551 Formyl transferase AANAER_1674 PF00390 Malic enzyme, N-terminal domain AANAER_1674 PF03949 Malic enzyme, NAD binding domain AANAER_1674 PF01515 Phosphate acetyl/butaryl transferase AANAER_1676 PF08501 Shikimate dehydrogenase substrate binding domain AANAER_1685 PF13476 AAA domain AANAER_1688 PF03738 Glutathionylspermidine synthase preATP-grasp AANAER_1689 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AANAER_1690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AANAER_1693 PF05099 Tellurite resistance protein TerB AANAER_1693 PF00226 DnaJ domain AANAER_1696 PF00902 Sec-independent protein translocase protein (TatC) AANAER_1697 PF02547 Queuosine biosynthesis protein AANAER_1699 PF00209 Sodium:neurotransmitter symporter family AANAER_1700 PF00271 Helicase conserved C-terminal domain AANAER_1700 PF00270 DEAD/DEAH box helicase AANAER_1703 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AANAER_1703 PF01464 Transglycosylase SLT domain AANAER_1705 PF03781 Sulfatase-modifying factor enzyme 1 AANAER_1705 PF12867 DinB superfamily AANAER_1709 PF00873 AcrB/AcrD/AcrF family AANAER_1711 PF01795 MraW methylase family AANAER_1713 PF00216 Bacterial DNA-binding protein AANAER_1716 PF00700 Bacterial flagellin C-terminal helical region AANAER_1716 PF00669 Bacterial flagellin N-terminal helical region AANAER_1720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1720 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1721 PF00072 Response regulator receiver domain AANAER_1721 PF00486 Transcriptional regulatory protein, C terminal AANAER_1724 PF00664 ABC transporter transmembrane region AANAER_1724 PF00005 ABC transporter AANAER_1727 PF04231 Endonuclease I AANAER_1730 PF00271 Helicase conserved C-terminal domain AANAER_1730 PF07516 SecA Wing and Scaffold domain AANAER_1730 PF07517 SecA DEAD-like domain AANAER_1730 PF02810 SEC-C motif AANAER_1730 PF01043 SecA preprotein cross-linking domain AANAER_1731 PF12704 MacB-like periplasmic core domain AANAER_1731 PF02687 FtsX-like permease family AANAER_1734 PF03971 Monomeric isocitrate dehydrogenase AANAER_1735 PF00056 lactate/malate dehydrogenase, NAD binding domain AANAER_1735 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AANAER_1737 PF00403 Heavy-metal-associated domain AANAER_1740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AANAER_1740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AANAER_1743 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AANAER_1743 PF01266 FAD dependent oxidoreductase AANAER_1745 PF01556 DnaJ C terminal domain AANAER_1745 PF00226 DnaJ domain AANAER_1746 PF13411 MerR HTH family regulatory protein AANAER_1747 PF12327 FtsZ family, C-terminal domain AANAER_1747 PF00091 Tubulin/FtsZ family, GTPase domain AANAER_1748 PF02491 SHS2 domain inserted in FTSA AANAER_1750 PF14490 Helix-hairpin-helix containing domain AANAER_1750 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AANAER_1750 PF13538 UvrD-like helicase C-terminal domain AANAER_1752 PF03960 ArsC family AANAER_1753 PF02623 FliW protein AANAER_1755 PF01312 FlhB HrpN YscU SpaS Family AANAER_1757 PF03717 Penicillin-binding Protein dimerisation domain AANAER_1757 PF00905 Penicillin binding protein transpeptidase domain AANAER_1758 PF00813 FliP family AANAER_1759 PF01590 GAF domain AANAER_1759 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1759 PF00563 EAL domain AANAER_1759 PF00360 Phytochrome region AANAER_1761 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AANAER_1762 PF00873 AcrB/AcrD/AcrF family AANAER_1763 PF00873 AcrB/AcrD/AcrF family AANAER_1765 PF01926 50S ribosome-binding GTPase AANAER_1769 PF00475 Imidazoleglycerol-phosphate dehydratase AANAER_1770 PF03330 Lytic transglycolase AANAER_1770 PF05036 Sporulation related domain AANAER_1771 PF01476 LysM domain AANAER_1771 PF00877 NlpC/P60 family AANAER_1772 PF01026 TatD related DNase AANAER_1774 PF10431 C-terminal, D2-small domain, of ClpB protein AANAER_1774 PF07724 AAA domain (Cdc48 subfamily) AANAER_1775 PF00227 Proteasome subunit AANAER_1776 PF01281 Ribosomal protein L9, N-terminal domain AANAER_1776 PF03948 Ribosomal protein L9, C-terminal domain AANAER_1780 PF02441 Flavoprotein AANAER_1781 PF01467 Cytidylyltransferase-like AANAER_1782 PF02223 Thymidylate kinase AANAER_1783 PF13393 Histidyl-tRNA synthetase AANAER_1783 PF03129 Anticodon binding domain AANAER_1784 PF17810 Arginine decarboxylase helical bundle domain AANAER_1784 PF17944 Arginine decarboxylase C-terminal helical extension AANAER_1784 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AANAER_1785 PF00132 Bacterial transferase hexapeptide (six repeats) AANAER_1785 PF06426 Serine acetyltransferase, N-terminal AANAER_1787 PF00694 Aconitase C-terminal domain AANAER_1787 PF00330 Aconitase family (aconitate hydratase) AANAER_1788 PF17760 UvrA interaction domain AANAER_1788 PF17755 UvrA DNA-binding domain AANAER_1791 PF00571 CBS domain AANAER_1791 PF01595 Cyclin M transmembrane N-terminal domain AANAER_1792 PF01243 Pyridoxamine 5'-phosphate oxidase AANAER_1794 PF00486 Transcriptional regulatory protein, C terminal AANAER_1794 PF00072 Response regulator receiver domain AANAER_1795 PF00583 Acetyltransferase (GNAT) family AANAER_1796 PF00202 Aminotransferase class-III AANAER_1797 PF06339 Ectoine synthase AANAER_1799 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AANAER_1800 PF13840 ACT domain AANAER_1800 PF00696 Amino acid kinase family AANAER_1805 PF07690 Major Facilitator Superfamily AANAER_1806 PF00375 Sodium:dicarboxylate symporter family AANAER_1807 PF10672 S-adenosylmethionine-dependent methyltransferase AANAER_1807 PF02926 THUMP domain AANAER_1807 PF01170 Putative RNA methylase family UPF0020 AANAER_1808 PF00384 Molybdopterin oxidoreductase AANAER_1808 PF18364 Molybdopterin oxidoreductase N-terminal domain AANAER_1808 PF01568 Molydopterin dinucleotide binding domain AANAER_1810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1810 PF00672 HAMP domain AANAER_1810 PF13756 Stimulus-sensing domain AANAER_1810 PF13755 Sensor N-terminal transmembrane domain AANAER_1810 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1811 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AANAER_1812 PF00072 Response regulator receiver domain AANAER_1812 PF00486 Transcriptional regulatory protein, C terminal AANAER_1813 PF03449 Transcription elongation factor, N-terminal AANAER_1813 PF01272 Transcription elongation factor, GreA/GreB, C-term AANAER_1816 PF03960 ArsC family AANAER_1820 PF00664 ABC transporter transmembrane region AANAER_1820 PF00005 ABC transporter AANAER_1822 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit AANAER_1826 PF01810 LysE type translocator AANAER_1829 PF02954 Bacterial regulatory protein, Fis family AANAER_1829 PF00158 Sigma-54 interaction domain AANAER_1832 PF17746 SfsA N-terminal OB domain AANAER_1832 PF03749 Sugar fermentation stimulation protein RE domain AANAER_1838 PF02567 Phenazine biosynthesis-like protein AANAER_1841 PF13520 Amino acid permease AANAER_1842 PF01734 Patatin-like phospholipase AANAER_1847 PF12697 Alpha/beta hydrolase family AANAER_1849 PF08482 ATP-dependent helicase C-terminal AANAER_1849 PF04408 Helicase associated domain (HA2) AANAER_1849 PF00270 DEAD/DEAH box helicase AANAER_1849 PF00271 Helicase conserved C-terminal domain AANAER_1854 PF00849 RNA pseudouridylate synthase AANAER_1863 PF00117 Glutamine amidotransferase class-I AANAER_1863 PF02540 NAD synthase AANAER_1863 PF00958 GMP synthase C terminal domain AANAER_1864 PF03600 Citrate transporter AANAER_1865 PF00890 FAD binding domain AANAER_1868 PF00155 Aminotransferase class I and II AANAER_1869 PF16916 Dimerisation domain of Zinc Transporter AANAER_1869 PF01545 Cation efflux family AANAER_1872 PF09424 Yqey-like protein AANAER_1873 PF00990 Diguanylate cyclase, GGDEF domain AANAER_1874 PF00933 Glycosyl hydrolase family 3 N terminal domain AANAER_1875 PF00465 Iron-containing alcohol dehydrogenase AANAER_1876 PF12833 Helix-turn-helix domain AANAER_1876 PF02311 AraC-like ligand binding domain AANAER_1877 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1877 PF00989 PAS fold AANAER_1877 PF08447 PAS fold AANAER_1877 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1886 PF02146 Sir2 family AANAER_1891 PF00106 short chain dehydrogenase AANAER_1892 PF03553 Na+/H+ antiporter family AANAER_1893 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_1893 PF12911 N-terminal TM domain of oligopeptide transport permease C AANAER_1897 PF03459 TOBE domain AANAER_1897 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AANAER_1898 PF01966 HD domain AANAER_1898 PF00013 KH domain AANAER_1898 PF12072 Domain of unknown function (DUF3552) AANAER_1900 PF00578 AhpC/TSA family AANAER_1901 PF00448 SRP54-type protein, GTPase domain AANAER_1903 PF00072 Response regulator receiver domain AANAER_1903 PF00486 Transcriptional regulatory protein, C terminal AANAER_1904 PF00672 HAMP domain AANAER_1904 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1904 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1904 PF13426 PAS domain AANAER_1905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AANAER_1906 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AANAER_1906 PF01411 tRNA synthetases class II (A) AANAER_1906 PF02272 DHHA1 domain AANAER_1907 PF05728 Uncharacterised protein family (UPF0227) AANAER_1911 PF00313 'Cold-shock' DNA-binding domain AANAER_1913 PF18073 Rubredoxin metal binding domain AANAER_1914 PF02130 Uncharacterized protein family UPF0054 AANAER_1915 PF01699 Sodium/calcium exchanger protein AANAER_1917 PF02915 Rubrerythrin AANAER_1919 PF03023 Lipid II flippase MurJ AANAER_1920 PF00005 ABC transporter AANAER_1920 PF00664 ABC transporter transmembrane region AANAER_1921 PF01180 Dihydroorotate dehydrogenase AANAER_1924 PF00701 Dihydrodipicolinate synthetase family AANAER_1926 PF01066 CDP-alcohol phosphatidyltransferase AANAER_1927 PF02163 Peptidase family M50 AANAER_1927 PF17820 PDZ domain AANAER_1928 PF01168 Alanine racemase, N-terminal domain AANAER_1931 PF00218 Indole-3-glycerol phosphate synthase AANAER_1933 PF03692 Putative zinc- or iron-chelating domain AANAER_1934 PF05175 Methyltransferase small domain AANAER_1936 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AANAER_1936 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AANAER_1936 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AANAER_1937 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AANAER_1937 PF00205 Thiamine pyrophosphate enzyme, central domain AANAER_1937 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AANAER_1939 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1939 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1940 PF02824 TGS domain AANAER_1940 PF04607 Region found in RelA / SpoT proteins AANAER_1940 PF13291 ACT domain AANAER_1941 PF14480 DNA polymerase III polC-type N-terminus I AANAER_1941 PF11490 DNA polymerase III polC-type N-terminus II AANAER_1941 PF07733 Bacterial DNA polymerase III alpha NTPase domain AANAER_1941 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AANAER_1941 PF02811 PHP domain AANAER_1941 PF00929 Exonuclease AANAER_1941 PF14579 Helix-hairpin-helix motif AANAER_1942 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AANAER_1943 PF00834 Ribulose-phosphate 3 epimerase family AANAER_1944 PF02253 Phospholipase A1 AANAER_1945 PF00293 NUDIX domain AANAER_1947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1947 PF13426 PAS domain AANAER_1947 PF00672 HAMP domain AANAER_1947 PF14827 Double sensory domain of two-component sensor kinase AANAER_1947 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1948 PF00072 Response regulator receiver domain AANAER_1948 PF00486 Transcriptional regulatory protein, C terminal AANAER_1950 PF04461 Protein of unknown function (DUF520) AANAER_1951 PF00860 Permease family AANAER_1955 PF04241 Protein of unknown function (DUF423) AANAER_1957 PF00156 Phosphoribosyl transferase domain AANAER_1958 PF00860 Permease family AANAER_1960 PF00155 Aminotransferase class I and II AANAER_1961 PF12833 Helix-turn-helix domain AANAER_1963 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AANAER_1964 PF03848 Tellurite resistance protein TehB AANAER_1966 PF13247 4Fe-4S dicluster domain AANAER_1967 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AANAER_1967 PF00384 Molybdopterin oxidoreductase AANAER_1967 PF01568 Molydopterin dinucleotide binding domain AANAER_1972 PF00512 His Kinase A (phospho-acceptor) domain AANAER_1972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_1973 PF00072 Response regulator receiver domain AANAER_1974 PF00672 HAMP domain AANAER_1974 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_1974 PF02203 Tar ligand binding domain homologue AANAER_1980 PF00893 Small Multidrug Resistance protein AANAER_1981 PF01425 Amidase AANAER_1982 PF01425 Amidase AANAER_1983 PF02785 Biotin carboxylase C-terminal domain AANAER_1983 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AANAER_1983 PF00289 Biotin carboxylase, N-terminal domain AANAER_1986 PF00005 ABC transporter AANAER_1990 PF00270 DEAD/DEAH box helicase AANAER_1990 PF00271 Helicase conserved C-terminal domain AANAER_1990 PF00570 HRDC domain AANAER_1990 PF16124 RecQ zinc-binding AANAER_1990 PF09382 RQC domain AANAER_1992 PF00578 AhpC/TSA family AANAER_1992 PF10417 C-terminal domain of 1-Cys peroxiredoxin AANAER_1996 PF03109 ABC1 family AANAER_1997 PF13545 Crp-like helix-turn-helix domain AANAER_1997 PF00027 Cyclic nucleotide-binding domain AANAER_1999 PF01966 HD domain AANAER_1999 PF00072 Response regulator receiver domain AANAER_2001 PF01734 Patatin-like phospholipase AANAER_2003 PF01594 AI-2E family transporter AANAER_2004 PF02405 Permease MlaE AANAER_2005 PF09383 NIL domain AANAER_2005 PF00005 ABC transporter AANAER_2008 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AANAER_2008 PF00749 tRNA synthetases class I (E and Q), catalytic domain AANAER_2009 PF00072 Response regulator receiver domain AANAER_2009 PF13188 PAS domain AANAER_2009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2009 PF08448 PAS fold AANAER_2009 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2010 PF00486 Transcriptional regulatory protein, C terminal AANAER_2010 PF00072 Response regulator receiver domain AANAER_2015 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AANAER_2016 PF08241 Methyltransferase domain AANAER_2019 PF02540 NAD synthase AANAER_2019 PF00795 Carbon-nitrogen hydrolase AANAER_2023 PF04055 Radical SAM superfamily AANAER_2024 PF01208 Uroporphyrinogen decarboxylase (URO-D) AANAER_2026 PF01118 Semialdehyde dehydrogenase, NAD binding domain AANAER_2026 PF02774 Semialdehyde dehydrogenase, dimerisation domain AANAER_2027 PF03989 DNA gyrase C-terminal domain, beta-propeller AANAER_2027 PF00521 DNA gyrase/topoisomerase IV, subunit A AANAER_2029 PF01960 ArgJ family AANAER_2030 PF02254 TrkA-N domain AANAER_2030 PF07885 Ion channel AANAER_2031 PF00830 Ribosomal L28 family AANAER_2032 PF01068 ATP dependent DNA ligase domain AANAER_2032 PF14743 DNA ligase OB-like domain AANAER_2034 PF13580 SIS domain AANAER_2035 PF00294 pfkB family carbohydrate kinase AANAER_2035 PF01467 Cytidylyltransferase-like AANAER_2036 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AANAER_2038 PF01370 NAD dependent epimerase/dehydratase family AANAER_2039 PF02397 Bacterial sugar transferase AANAER_2040 PF03808 Glycosyl transferase WecB/TagA/CpsF family AANAER_2043 PF00534 Glycosyl transferases group 1 AANAER_2043 PF13439 Glycosyltransferase Family 4 AANAER_2049 PF00248 Aldo/keto reductase family AANAER_2051 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AANAER_2051 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AANAER_2051 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AANAER_2052 PF02350 UDP-N-acetylglucosamine 2-epimerase AANAER_2054 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AANAER_2054 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AANAER_2054 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AANAER_2055 PF00459 Inositol monophosphatase family AANAER_2056 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AANAER_2062 PF03062 MBOAT, membrane-bound O-acyltransferase family AANAER_2066 PF13439 Glycosyltransferase Family 4 AANAER_2066 PF00534 Glycosyl transferases group 1 AANAER_2067 PF00535 Glycosyl transferase family 2 AANAER_2068 PF00534 Glycosyl transferases group 1 AANAER_2068 PF13439 Glycosyltransferase Family 4 AANAER_2069 PF01370 NAD dependent epimerase/dehydratase family AANAER_2070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AANAER_2070 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AANAER_2070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AANAER_2075 PF01219 Prokaryotic diacylglycerol kinase AANAER_2077 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AANAER_2079 PF00037 4Fe-4S binding domain AANAER_2080 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_2080 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AANAER_2081 PF04898 Glutamate synthase central domain AANAER_2081 PF01493 GXGXG motif AANAER_2081 PF01645 Conserved region in glutamate synthase AANAER_2081 PF00310 Glutamine amidotransferases class-II AANAER_2082 PF03480 Bacterial extracellular solute-binding protein, family 7 AANAER_2083 PF03480 Bacterial extracellular solute-binding protein, family 7 AANAER_2085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AANAER_2086 PF02659 Putative manganese efflux pump AANAER_2087 PF02535 ZIP Zinc transporter AANAER_2089 PF00072 Response regulator receiver domain AANAER_2090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2090 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2090 PF17149 Periplasmic sensor domain found in signal transduction proteins AANAER_2090 PF01627 Hpt domain AANAER_2090 PF00672 HAMP domain AANAER_2090 PF00072 Response regulator receiver domain AANAER_2091 PF11849 Domain of unknown function (DUF3369) AANAER_2093 PF00072 Response regulator receiver domain AANAER_2093 PF00486 Transcriptional regulatory protein, C terminal AANAER_2094 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2094 PF08447 PAS fold AANAER_2095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2095 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2096 PF00072 Response regulator receiver domain AANAER_2100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2100 PF08447 PAS fold AANAER_2100 PF00989 PAS fold AANAER_2100 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2101 PF13344 Haloacid dehalogenase-like hydrolase AANAER_2101 PF00293 NUDIX domain AANAER_2105 PF02653 Branched-chain amino acid transport system / permease component AANAER_2106 PF11862 Domain of unknown function (DUF3382) AANAER_2106 PF02653 Branched-chain amino acid transport system / permease component AANAER_2107 PF12399 Branched-chain amino acid ATP-binding cassette transporter AANAER_2107 PF00005 ABC transporter AANAER_2108 PF00005 ABC transporter AANAER_2109 PF00171 Aldehyde dehydrogenase family AANAER_2111 PF02203 Tar ligand binding domain homologue AANAER_2111 PF00672 HAMP domain AANAER_2111 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2112 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2112 PF10442 FIST C domain AANAER_2112 PF08495 FIST N domain AANAER_2112 PF00563 EAL domain AANAER_2113 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2114 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2114 PF17151 Periplasmic sensor domain AANAER_2119 PF12833 Helix-turn-helix domain AANAER_2119 PF06719 AraC-type transcriptional regulator N-terminus AANAER_2120 PF01047 MarR family AANAER_2123 PF00155 Aminotransferase class I and II AANAER_2125 PF00296 Luciferase-like monooxygenase AANAER_2126 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AANAER_2126 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AANAER_2129 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AANAER_2130 PF08240 Alcohol dehydrogenase GroES-like domain AANAER_2130 PF00107 Zinc-binding dehydrogenase AANAER_2132 PF00465 Iron-containing alcohol dehydrogenase AANAER_2133 PF07690 Major Facilitator Superfamily AANAER_2134 PF12706 Beta-lactamase superfamily domain AANAER_2140 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2140 PF17151 Periplasmic sensor domain AANAER_2141 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AANAER_2142 PF01029 NusB family AANAER_2143 PF00885 6,7-dimethyl-8-ribityllumazine synthase AANAER_2144 PF00793 DAHP synthetase I family AANAER_2148 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AANAER_2151 PF03958 Bacterial type II/III secretion system short domain AANAER_2151 PF07660 Secretin and TonB N terminus short domain AANAER_2151 PF00263 Bacterial type II and III secretion system protein AANAER_2151 PF11741 AMIN domain AANAER_2152 PF09186 Domain of unknown function (DUF1949) AANAER_2152 PF01205 Uncharacterized protein family UPF0029 AANAER_2153 PF01728 FtsJ-like methyltransferase AANAER_2153 PF01479 S4 domain AANAER_2154 PF01687 Riboflavin kinase AANAER_2154 PF06574 FAD synthetase AANAER_2155 PF13649 Methyltransferase domain AANAER_2156 PF00578 AhpC/TSA family AANAER_2158 PF02913 FAD linked oxidases, C-terminal domain AANAER_2158 PF01565 FAD binding domain AANAER_2159 PF03631 Virulence factor BrkB AANAER_2163 PF06463 Molybdenum Cofactor Synthesis C AANAER_2163 PF04055 Radical SAM superfamily AANAER_2164 PF10518 TAT (twin-arginine translocation) pathway signal sequence AANAER_2164 PF01568 Molydopterin dinucleotide binding domain AANAER_2164 PF00384 Molybdopterin oxidoreductase AANAER_2164 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AANAER_2165 PF12800 4Fe-4S binding domain AANAER_2165 PF12838 4Fe-4S dicluster domain AANAER_2166 PF12801 4Fe-4S binding domain AANAER_2166 PF00037 4Fe-4S binding domain AANAER_2167 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AANAER_2168 PF12838 4Fe-4S dicluster domain AANAER_2172 PF08447 PAS fold AANAER_2172 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2175 PF00639 PPIC-type PPIASE domain AANAER_2175 PF09312 SurA N-terminal domain AANAER_2185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AANAER_2185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AANAER_2185 PF00034 Cytochrome c AANAER_2186 PF01799 [2Fe-2S] binding domain AANAER_2186 PF00111 2Fe-2S iron-sulfur cluster binding domain AANAER_2188 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AANAER_2189 PF00881 Nitroreductase family AANAER_2190 PF00171 Aldehyde dehydrogenase family AANAER_2191 PF00255 Glutathione peroxidase AANAER_2193 PF00881 Nitroreductase family AANAER_2195 PF02525 Flavodoxin-like fold AANAER_2196 PF00465 Iron-containing alcohol dehydrogenase AANAER_2197 PF01638 HxlR-like helix-turn-helix AANAER_2198 PF07690 Major Facilitator Superfamily AANAER_2199 PF01048 Phosphorylase superfamily AANAER_2200 PF00698 Acyl transferase domain AANAER_2201 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AANAER_2204 PF01370 NAD dependent epimerase/dehydratase family AANAER_2204 PF08338 Domain of unknown function (DUF1731) AANAER_2205 PF00072 Response regulator receiver domain AANAER_2205 PF04397 LytTr DNA-binding domain AANAER_2206 PF07694 5TMR of 5TMR-LYT AANAER_2206 PF13492 GAF domain AANAER_2206 PF06580 Histidine kinase AANAER_2206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2210 PF04052 TolB amino-terminal domain AANAER_2212 PF02472 Biopolymer transport protein ExbD/TolR AANAER_2213 PF01618 MotA/TolQ/ExbB proton channel family AANAER_2214 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AANAER_2215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AANAER_2215 PF02874 ATP synthase alpha/beta family, beta-barrel domain AANAER_2216 PF00231 ATP synthase AANAER_2217 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AANAER_2217 PF00306 ATP synthase alpha/beta chain, C terminal domain AANAER_2217 PF02874 ATP synthase alpha/beta family, beta-barrel domain AANAER_2218 PF00213 ATP synthase delta (OSCP) subunit AANAER_2219 PF00430 ATP synthase B/B' CF(0) AANAER_2221 PF17762 HTH domain found in ParB protein AANAER_2221 PF02195 ParB-like nuclease domain AANAER_2222 PF13614 AAA domain AANAER_2225 PF02911 Formyl transferase, C-terminal domain AANAER_2225 PF00551 Formyl transferase AANAER_2226 PF00696 Amino acid kinase family AANAER_2227 PF01926 50S ribosome-binding GTPase AANAER_2227 PF01018 GTP1/OBG AANAER_2228 PF01016 Ribosomal L27 protein AANAER_2229 PF00829 Ribosomal prokaryotic L21 protein AANAER_2230 PF01042 Endoribonuclease L-PSP AANAER_2231 PF08275 DNA primase catalytic core, N-terminal domain AANAER_2231 PF16730 DnaG-primase C-terminal, helicase-binding domain AANAER_2231 PF13662 Toprim domain AANAER_2231 PF01807 CHC2 zinc finger AANAER_2233 PF00075 RNase H AANAER_2234 PF14622 Ribonuclease-III-like AANAER_2234 PF00035 Double-stranded RNA binding motif AANAER_2235 PF01264 Chorismate synthase AANAER_2237 PF02311 AraC-like ligand binding domain AANAER_2237 PF12833 Helix-turn-helix domain AANAER_2238 PF00593 TonB dependent receptor AANAER_2238 PF07715 TonB-dependent Receptor Plug Domain AANAER_2244 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AANAER_2245 PF07715 TonB-dependent Receptor Plug Domain AANAER_2245 PF00593 TonB dependent receptor AANAER_2247 PF01032 FecCD transport family AANAER_2248 PF00005 ABC transporter AANAER_2252 PF02001 Protein of unknown function DUF134 AANAER_2253 PF01435 Peptidase family M48 AANAER_2255 PF00072 Response regulator receiver domain AANAER_2255 PF00486 Transcriptional regulatory protein, C terminal AANAER_2256 PF00300 Histidine phosphatase superfamily (branch 1) AANAER_2257 PF00300 Histidine phosphatase superfamily (branch 1) AANAER_2260 PF01926 50S ribosome-binding GTPase AANAER_2260 PF12631 MnmE helical domain AANAER_2260 PF10396 GTP-binding protein TrmE N-terminus AANAER_2262 PF02096 60Kd inner membrane protein AANAER_2262 PF14849 YidC periplasmic domain AANAER_2263 PF01809 Putative membrane protein insertion efficiency factor AANAER_2264 PF00825 Ribonuclease P AANAER_2265 PF00468 Ribosomal protein L34 AANAER_2266 PF10431 C-terminal, D2-small domain, of ClpB protein AANAER_2266 PF02861 Clp amino terminal domain, pathogenicity island component AANAER_2266 PF00004 ATPase family associated with various cellular activities (AAA) AANAER_2266 PF07724 AAA domain (Cdc48 subfamily) AANAER_2266 PF17871 AAA lid domain AANAER_2267 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2267 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2269 PF01351 Ribonuclease HII AANAER_2274 PF13649 Methyltransferase domain AANAER_2276 PF00296 Luciferase-like monooxygenase AANAER_2278 PF00005 ABC transporter AANAER_2280 PF01497 Periplasmic binding protein AANAER_2282 PF07660 Secretin and TonB N terminus short domain AANAER_2282 PF00593 TonB dependent receptor AANAER_2282 PF07715 TonB-dependent Receptor Plug Domain AANAER_2285 PF01209 ubiE/COQ5 methyltransferase family AANAER_2286 PF01618 MotA/TolQ/ExbB proton channel family AANAER_2287 PF02472 Biopolymer transport protein ExbD/TolR AANAER_2289 PF01625 Peptide methionine sulfoxide reductase AANAER_2289 PF01641 SelR domain AANAER_2290 PF01557 Fumarylacetoacetate (FAA) hydrolase family AANAER_2293 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_2293 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2293 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2294 PF00202 Aminotransferase class-III AANAER_2299 PF02142 MGS-like domain AANAER_2303 PF01808 AICARFT/IMPCHase bienzyme AANAER_2303 PF02142 MGS-like domain AANAER_2304 PF00672 HAMP domain AANAER_2304 PF00909 Ammonium Transporter Family AANAER_2309 PF12704 MacB-like periplasmic core domain AANAER_2309 PF00005 ABC transporter AANAER_2309 PF02687 FtsX-like permease family AANAER_2313 PF18030 RimK PreATP-grasp domain AANAER_2313 PF08443 RimK-like ATP-grasp domain AANAER_2318 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AANAER_2318 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AANAER_2319 PF00586 AIR synthase related protein, N-terminal domain AANAER_2319 PF02769 AIR synthase related protein, C-terminal domain AANAER_2319 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AANAER_2321 PF01551 Peptidase family M23 AANAER_2321 PF01464 Transglycosylase SLT domain AANAER_2321 PF10145 Phage-related minor tail protein AANAER_2322 PF03448 MgtE intracellular N domain AANAER_2322 PF01769 Divalent cation transporter AANAER_2322 PF00571 CBS domain AANAER_2323 PF01810 LysE type translocator AANAER_2324 PF02203 Tar ligand binding domain homologue AANAER_2324 PF00672 HAMP domain AANAER_2324 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2325 PF01227 GTP cyclohydrolase I AANAER_2327 PF00437 Type II/IV secretion system protein AANAER_2330 PF07650 KH domain AANAER_2330 PF01926 50S ribosome-binding GTPase AANAER_2331 PF13335 Magnesium chelatase, subunit ChlI C-terminal AANAER_2331 PF01078 Magnesium chelatase, subunit ChlI AANAER_2332 PF01327 Polypeptide deformylase AANAER_2333 PF00574 Clp protease AANAER_2334 PF05697 Bacterial trigger factor protein (TF) AANAER_2334 PF05698 Bacterial trigger factor protein (TF) C-terminus AANAER_2334 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AANAER_2335 PF13519 von Willebrand factor type A domain AANAER_2336 PF03976 Polyphosphate kinase 2 (PPK2) AANAER_2337 PF03976 Polyphosphate kinase 2 (PPK2) AANAER_2338 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AANAER_2339 PF00301 Rubredoxin AANAER_2340 PF03435 Saccharopine dehydrogenase NADP binding domain AANAER_2340 PF16653 Saccharopine dehydrogenase C-terminal domain AANAER_2342 PF13356 Arm DNA-binding domain AANAER_2342 PF00589 Phage integrase family AANAER_2344 PF00872 Transposase, Mutator family AANAER_2347 PF00342 Phosphoglucose isomerase AANAER_2348 PF01081 KDPG and KHG aldolase AANAER_2349 PF00920 Dehydratase family AANAER_2350 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AANAER_2351 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AANAER_2351 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AANAER_2352 PF00483 Nucleotidyl transferase AANAER_2353 PF00128 Alpha amylase, catalytic domain AANAER_2355 PF05161 MOFRL family AANAER_2355 PF13660 Domain of unknown function (DUF4147) AANAER_2358 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2358 PF03707 Bacterial signalling protein N terminal repeat AANAER_2358 PF00563 EAL domain AANAER_2359 PF03150 Di-haem cytochrome c peroxidase AANAER_2359 PF00034 Cytochrome c AANAER_2360 PF01475 Ferric uptake regulator family AANAER_2362 PF07664 Ferrous iron transport protein B C terminus AANAER_2362 PF02421 Ferrous iron transport protein B AANAER_2362 PF07670 Nucleoside recognition AANAER_2364 PF04376 Arginine-tRNA-protein transferase, N terminus AANAER_2364 PF04377 Arginine-tRNA-protein transferase, C terminus AANAER_2365 PF00290 Tryptophan synthase alpha chain AANAER_2366 PF02548 Ketopantoate hydroxymethyltransferase AANAER_2367 PF17864 RuvB AAA lid domain AANAER_2367 PF05491 RuvB C-terminal winged helix domain AANAER_2367 PF05496 Holliday junction DNA helicase RuvB P-loop domain AANAER_2368 PF01594 AI-2E family transporter AANAER_2371 PF04403 Paraquat-inducible protein A AANAER_2372 PF02470 MlaD protein AANAER_2374 PF00004 ATPase family associated with various cellular activities (AAA) AANAER_2374 PF10431 C-terminal, D2-small domain, of ClpB protein AANAER_2374 PF02861 Clp amino terminal domain, pathogenicity island component AANAER_2374 PF17871 AAA lid domain AANAER_2374 PF07724 AAA domain (Cdc48 subfamily) AANAER_2375 PF02617 ATP-dependent Clp protease adaptor protein ClpS AANAER_2381 PF00771 FHIPEP family AANAER_2382 PF18269 T3SS EscN ATPase C-terminal domain AANAER_2382 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AANAER_2384 PF01312 FlhB HrpN YscU SpaS Family AANAER_2387 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AANAER_2387 PF00460 Flagella basal body rod protein AANAER_2388 PF02049 Flagellar hook-basal body complex protein FliE AANAER_2390 PF10609 NUBPL iron-transfer P-loop NTPase AANAER_2391 PF00448 SRP54-type protein, GTPase domain AANAER_2396 PF01618 MotA/TolQ/ExbB proton channel family AANAER_2397 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AANAER_2401 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AANAER_2403 PF14842 FliG N-terminal domain AANAER_2403 PF14841 FliG middle domain AANAER_2403 PF01706 FliG C-terminal domain AANAER_2404 PF01514 Secretory protein of YscJ/FliF family AANAER_2404 PF08345 Flagellar M-ring protein C-terminal AANAER_2405 PF00460 Flagella basal body rod protein AANAER_2406 PF00460 Flagella basal body rod protein AANAER_2406 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AANAER_2409 PF00460 Flagella basal body rod protein AANAER_2409 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AANAER_2412 PF01782 RimM N-terminal domain AANAER_2414 PF00886 Ribosomal protein S16 AANAER_2415 PF02881 SRP54-type protein, helical bundle domain AANAER_2415 PF02978 Signal peptide binding domain AANAER_2415 PF00448 SRP54-type protein, GTPase domain AANAER_2416 PF00849 RNA pseudouridylate synthase AANAER_2417 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AANAER_2417 PF02390 Putative methyltransferase AANAER_2419 PF01784 NIF3 (NGG1p interacting factor 3) AANAER_2420 PF02091 Glycyl-tRNA synthetase alpha subunit AANAER_2422 PF00731 AIR carboxylase AANAER_2425 PF17200 Single Cache domain 2 AANAER_2425 PF00672 HAMP domain AANAER_2425 PF00672 HAMP domain AANAER_2425 PF17200 Single Cache domain 2 AANAER_2425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2426 PF13476 AAA domain AANAER_2427 PF01513 ATP-NAD kinase AANAER_2429 PF03144 Elongation factor Tu domain 2 AANAER_2429 PF00679 Elongation factor G C-terminus AANAER_2429 PF14492 Elongation Factor G, domain II AANAER_2429 PF03764 Elongation factor G, domain IV AANAER_2429 PF00009 Elongation factor Tu GTP binding domain AANAER_2430 PF00177 Ribosomal protein S7p/S5e AANAER_2431 PF00164 Ribosomal protein S12/S23 AANAER_2435 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AANAER_2436 PF09962 Uncharacterized conserved protein (DUF2196) AANAER_2440 PF01032 FecCD transport family AANAER_2441 PF00005 ABC transporter AANAER_2443 PF00672 HAMP domain AANAER_2443 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2443 PF02743 Cache domain AANAER_2444 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2444 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_2444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2446 PF07690 Major Facilitator Superfamily AANAER_2449 PF01177 Asp/Glu/Hydantoin racemase AANAER_2451 PF00005 ABC transporter AANAER_2454 PF01891 Cobalt uptake substrate-specific transmembrane region AANAER_2456 PF00056 lactate/malate dehydrogenase, NAD binding domain AANAER_2456 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AANAER_2471 PF00149 Calcineurin-like phosphoesterase AANAER_2478 PF00004 ATPase family associated with various cellular activities (AAA) AANAER_2485 PF04983 RNA polymerase Rpb1, domain 3 AANAER_2485 PF00623 RNA polymerase Rpb1, domain 2 AANAER_2485 PF04997 RNA polymerase Rpb1, domain 1 AANAER_2485 PF05000 RNA polymerase Rpb1, domain 4 AANAER_2485 PF04998 RNA polymerase Rpb1, domain 5 AANAER_2486 PF04565 RNA polymerase Rpb2, domain 3 AANAER_2486 PF10385 RNA polymerase beta subunit external 1 domain AANAER_2486 PF00562 RNA polymerase Rpb2, domain 6 AANAER_2486 PF04560 RNA polymerase Rpb2, domain 7 AANAER_2486 PF04561 RNA polymerase Rpb2, domain 2 AANAER_2486 PF04563 RNA polymerase beta subunit AANAER_2487 PF00542 Ribosomal protein L7/L12 C-terminal domain AANAER_2487 PF16320 Ribosomal protein L7/L12 dimerisation domain AANAER_2488 PF00466 Ribosomal protein L10 AANAER_2489 PF00687 Ribosomal protein L1p/L10e family AANAER_2490 PF00298 Ribosomal protein L11, RNA binding domain AANAER_2490 PF03946 Ribosomal protein L11, N-terminal domain AANAER_2491 PF02357 Transcription termination factor nusG AANAER_2494 PF00471 Ribosomal protein L33 AANAER_2495 PF03143 Elongation factor Tu C-terminal domain AANAER_2495 PF03144 Elongation factor Tu domain 2 AANAER_2495 PF00009 Elongation factor Tu GTP binding domain AANAER_2500 PF08245 Mur ligase middle domain AANAER_2501 PF00953 Glycosyl transferase family 4 AANAER_2501 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AANAER_2502 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AANAER_2502 PF01676 Metalloenzyme superfamily AANAER_2503 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AANAER_2503 PF00005 ABC transporter AANAER_2504 PF00905 Penicillin binding protein transpeptidase domain AANAER_2504 PF00912 Transglycosylase AANAER_2505 PF03951 Glutamine synthetase, beta-Grasp domain AANAER_2505 PF00120 Glutamine synthetase, catalytic domain AANAER_2506 PF02811 PHP domain AANAER_2507 PF00072 Response regulator receiver domain AANAER_2507 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2508 PF02391 MoaE protein AANAER_2510 PF02621 Menaquinone biosynthesis AANAER_2511 PF02673 Bacitracin resistance protein BacA AANAER_2512 PF03033 Glycosyltransferase family 28 N-terminal domain AANAER_2512 PF04101 Glycosyltransferase family 28 C-terminal domain AANAER_2513 PF01098 Cell cycle protein AANAER_2514 PF00905 Penicillin binding protein transpeptidase domain AANAER_2514 PF03717 Penicillin-binding Protein dimerisation domain AANAER_2515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AANAER_2517 PF00360 Phytochrome region AANAER_2517 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2517 PF00563 EAL domain AANAER_2517 PF01590 GAF domain AANAER_2525 PF00117 Glutamine amidotransferase class-I AANAER_2526 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2526 PF08448 PAS fold AANAER_2527 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AANAER_2528 PF00155 Aminotransferase class I and II AANAER_2529 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AANAER_2530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AANAER_2531 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AANAER_2531 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AANAER_2533 PF10531 SLBB domain AANAER_2533 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AANAER_2533 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AANAER_2534 PF00285 Citrate synthase, C-terminal domain AANAER_2535 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AANAER_2535 PF00384 Molybdopterin oxidoreductase AANAER_2535 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AANAER_2536 PF00146 NADH dehydrogenase AANAER_2537 PF12838 4Fe-4S dicluster domain AANAER_2538 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AANAER_2539 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AANAER_2540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AANAER_2540 PF00361 Proton-conducting membrane transporter AANAER_2541 PF00361 Proton-conducting membrane transporter AANAER_2541 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AANAER_2542 PF00361 Proton-conducting membrane transporter AANAER_2543 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AANAER_2544 PF02910 Fumarate reductase flavoprotein C-term AANAER_2544 PF00890 FAD binding domain AANAER_2545 PF13085 2Fe-2S iron-sulfur cluster binding domain AANAER_2545 PF13183 4Fe-4S dicluster domain AANAER_2546 PF00350 Dynamin family AANAER_2547 PF00350 Dynamin family AANAER_2548 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AANAER_2548 PF00205 Thiamine pyrophosphate enzyme, central domain AANAER_2548 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AANAER_2549 PF00171 Aldehyde dehydrogenase family AANAER_2550 PF00549 CoA-ligase AANAER_2550 PF08442 ATP-grasp domain AANAER_2551 PF00549 CoA-ligase AANAER_2551 PF02629 CoA binding domain AANAER_2552 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AANAER_2552 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AANAER_2556 PF09371 Tex-like protein N-terminal domain AANAER_2556 PF00575 S1 RNA binding domain AANAER_2556 PF17674 HHH domain AANAER_2556 PF16921 Tex protein YqgF-like domain AANAER_2557 PF01042 Endoribonuclease L-PSP AANAER_2558 PF00293 NUDIX domain AANAER_2560 PF01914 MarC family integral membrane protein AANAER_2561 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_2562 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_2563 PF00497 Bacterial extracellular solute-binding proteins, family 3 AANAER_2564 PF00005 ABC transporter AANAER_2566 PF00465 Iron-containing alcohol dehydrogenase AANAER_2568 PF01758 Sodium Bile acid symporter family AANAER_2570 PF01810 LysE type translocator AANAER_2573 PF00285 Citrate synthase, C-terminal domain AANAER_2574 PF00694 Aconitase C-terminal domain AANAER_2574 PF00330 Aconitase family (aconitate hydratase) AANAER_2575 PF04303 PrpF protein AANAER_2577 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2577 PF17151 Periplasmic sensor domain AANAER_2579 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AANAER_2579 PF03900 Porphobilinogen deaminase, C-terminal domain AANAER_2581 PF12169 DNA polymerase III subunits gamma and tau domain III AANAER_2581 PF12170 DNA polymerase III tau subunit V interacting with alpha AANAER_2582 PF01177 Asp/Glu/Hydantoin racemase AANAER_2584 PF03180 NLPA lipoprotein AANAER_2585 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_2586 PF00005 ABC transporter AANAER_2586 PF09383 NIL domain AANAER_2589 PF07497 Rho termination factor, RNA-binding domain AANAER_2589 PF07498 Rho termination factor, N-terminal domain AANAER_2589 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AANAER_2590 PF10417 C-terminal domain of 1-Cys peroxiredoxin AANAER_2590 PF00578 AhpC/TSA family AANAER_2592 PF00334 Nucleoside diphosphate kinase AANAER_2594 PF01783 Ribosomal L32p protein family AANAER_2595 PF02504 Fatty acid synthesis protein AANAER_2596 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AANAER_2596 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AANAER_2598 PF03591 AzlC protein AANAER_2606 PF00425 chorismate binding enzyme AANAER_2607 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AANAER_2607 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AANAER_2608 PF00202 Aminotransferase class-III AANAER_2610 PF00391 PEP-utilising enzyme, mobile domain AANAER_2610 PF00224 Pyruvate kinase, barrel domain AANAER_2610 PF02887 Pyruvate kinase, alpha/beta domain AANAER_2611 PF13488 Glycine zipper AANAER_2611 PF00691 OmpA family AANAER_2614 PF00171 Aldehyde dehydrogenase family AANAER_2615 PF13426 PAS domain AANAER_2615 PF00672 HAMP domain AANAER_2615 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2616 PF00486 Transcriptional regulatory protein, C terminal AANAER_2616 PF00072 Response regulator receiver domain AANAER_2618 PF00384 Molybdopterin oxidoreductase AANAER_2618 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AANAER_2618 PF12838 4Fe-4S dicluster domain AANAER_2618 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AANAER_2618 PF01568 Molydopterin dinucleotide binding domain AANAER_2619 PF02021 Uncharacterised protein family UPF0102 AANAER_2620 PF00654 Voltage gated chloride channel AANAER_2622 PF00999 Sodium/hydrogen exchanger family AANAER_2622 PF02254 TrkA-N domain AANAER_2623 PF00155 Aminotransferase class I and II AANAER_2625 PF00484 Carbonic anhydrase AANAER_2627 PF04055 Radical SAM superfamily AANAER_2632 PF04028 Domain of unknown function (DUF374) AANAER_2633 PF01938 TRAM domain AANAER_2633 PF04055 Radical SAM superfamily AANAER_2633 PF00919 Uncharacterized protein family UPF0004 AANAER_2635 PF08529 NusA N-terminal domain AANAER_2635 PF13184 NusA-like KH domain AANAER_2636 PF09190 DALR domain AANAER_2636 PF01406 tRNA synthetases class I (C) catalytic domain AANAER_2638 PF00005 ABC transporter AANAER_2638 PF08402 TOBE domain AANAER_2639 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_2641 PF01084 Ribosomal protein S18 AANAER_2642 PF00436 Single-strand binding protein family AANAER_2643 PF01250 Ribosomal protein S6 AANAER_2644 PF06144 DNA polymerase III, delta subunit AANAER_2646 PF00773 RNB domain AANAER_2647 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AANAER_2647 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AANAER_2650 PF18255 DNA processing protein A sterile alpha motif domain AANAER_2650 PF02481 DNA recombination-mediator protein A AANAER_2651 PF06965 Na+/H+ antiporter 1 AANAER_2652 PF00672 HAMP domain AANAER_2652 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2652 PF02203 Tar ligand binding domain homologue AANAER_2653 PF01225 Mur ligase family, catalytic domain AANAER_2653 PF08245 Mur ligase middle domain AANAER_2653 PF02875 Mur ligase family, glutamate ligase domain AANAER_2655 PF00155 Aminotransferase class I and II AANAER_2657 PF01702 Queuine tRNA-ribosyltransferase AANAER_2658 PF02686 Glu-tRNAGln amidotransferase C subunit AANAER_2659 PF03960 ArsC family AANAER_2660 PF01474 Class-II DAHP synthetase family AANAER_2661 PF00923 Transaldolase/Fructose-6-phosphate aldolase AANAER_2663 PF03652 Holliday junction resolvase AANAER_2664 PF01648 4'-phosphopantetheinyl transferase superfamily AANAER_2665 PF00528 Binding-protein-dependent transport system inner membrane component AANAER_2666 PF02569 Pantoate-beta-alanine ligase AANAER_2667 PF18693 TRAM domain AANAER_2667 PF00919 Uncharacterized protein family UPF0004 AANAER_2667 PF04055 Radical SAM superfamily AANAER_2668 PF01171 PP-loop family AANAER_2671 PF02107 Flagellar L-ring protein AANAER_2676 PF01313 Bacterial export proteins, family 3 AANAER_2678 PF02119 Flagellar P-ring protein AANAER_2679 PF02154 Flagellar motor switch protein FliM AANAER_2679 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AANAER_2681 PF00543 Nitrogen regulatory protein P-II AANAER_2682 PF00909 Ammonium Transporter Family AANAER_2683 PF00543 Nitrogen regulatory protein P-II AANAER_2684 PF00909 Ammonium Transporter Family AANAER_2687 PF01966 HD domain AANAER_2687 PF01842 ACT domain AANAER_2687 PF01909 Nucleotidyltransferase domain AANAER_2687 PF08335 GlnD PII-uridylyltransferase AANAER_2688 PF00892 EamA-like transporter family AANAER_2691 PF01451 Low molecular weight phosphotyrosine protein phosphatase AANAER_2692 PF02040 Arsenical pump membrane protein AANAER_2694 PF01022 Bacterial regulatory protein, arsR family AANAER_2695 PF02779 Transketolase, pyrimidine binding domain AANAER_2695 PF02780 Transketolase, C-terminal domain AANAER_2695 PF00456 Transketolase, thiamine diphosphate binding domain AANAER_2698 PF00529 HlyD membrane-fusion protein of T1SS AANAER_2699 PF00005 ABC transporter AANAER_2699 PF00664 ABC transporter transmembrane region AANAER_2699 PF03412 Peptidase C39 family AANAER_2701 PF00486 Transcriptional regulatory protein, C terminal AANAER_2701 PF00072 Response regulator receiver domain AANAER_2702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2702 PF00989 PAS fold AANAER_2702 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2707 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AANAER_2707 PF00037 4Fe-4S binding domain AANAER_2707 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AANAER_2708 PF02906 Iron only hydrogenase large subunit, C-terminal domain AANAER_2708 PF02256 Iron hydrogenase small subunit AANAER_2708 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AANAER_2708 PF00037 4Fe-4S binding domain AANAER_2710 PF00374 Nickel-dependent hydrogenase AANAER_2712 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AANAER_2713 PF09210 Domain of unknown function (DUF1957) AANAER_2713 PF03065 Glycosyl hydrolase family 57 AANAER_2715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AANAER_2715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AANAER_2715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AANAER_2715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AANAER_2716 PF00343 Carbohydrate phosphorylase AANAER_2716 PF11897 Protein of unknown function (DUF3417) AANAER_2717 PF08323 Starch synthase catalytic domain AANAER_2717 PF00534 Glycosyl transferases group 1 AANAER_2720 PF00483 Nucleotidyl transferase AANAER_2721 PF00365 Phosphofructokinase AANAER_2722 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AANAER_2722 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AANAER_2723 PF09094 Domain of unknown function (DUF1925) AANAER_2723 PF09095 Domain of unknown function (DUF1926) AANAER_2723 PF03065 Glycosyl hydrolase family 57 AANAER_2725 PF07715 TonB-dependent Receptor Plug Domain AANAER_2725 PF00593 TonB dependent receptor AANAER_2727 PF01590 GAF domain AANAER_2727 PF08446 PAS fold AANAER_2727 PF00360 Phytochrome region AANAER_2727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2727 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2728 PF12282 Signal transduction histidine kinase AANAER_2728 PF07568 Histidine kinase AANAER_2729 PF00486 Transcriptional regulatory protein, C terminal AANAER_2729 PF00072 Response regulator receiver domain AANAER_2731 PF00072 Response regulator receiver domain AANAER_2731 PF00486 Transcriptional regulatory protein, C terminal AANAER_2732 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2732 PF17158 Membrane-associated sensor, integral membrane domain AANAER_2733 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2733 PF00989 PAS fold AANAER_2733 PF08447 PAS fold AANAER_2733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2734 PF13407 Periplasmic binding protein domain AANAER_2735 PF02203 Tar ligand binding domain homologue AANAER_2735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AANAER_2735 PF00672 HAMP domain AANAER_2739 PF00920 Dehydratase family AANAER_2747 PF13180 PDZ domain AANAER_2747 PF17820 PDZ domain AANAER_2748 PF00072 Response regulator receiver domain AANAER_2748 PF00486 Transcriptional regulatory protein, C terminal AANAER_2749 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2754 PF01914 MarC family integral membrane protein AANAER_2755 PF11412 Disulphide bond corrector protein DsbC AANAER_2755 PF02683 Cytochrome C biogenesis protein transmembrane region AANAER_2756 PF00085 Thioredoxin AANAER_2759 PF08495 FIST N domain AANAER_2759 PF10442 FIST C domain AANAER_2759 PF00563 EAL domain AANAER_2759 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2760 PF02666 Phosphatidylserine decarboxylase AANAER_2764 PF00012 Hsp70 protein AANAER_2765 PF01025 GrpE AANAER_2766 PF01628 HrcA protein C terminal domain AANAER_2767 PF16868 NMT1-like family AANAER_2768 PF00072 Response regulator receiver domain AANAER_2768 PF00486 Transcriptional regulatory protein, C terminal AANAER_2769 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2769 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2769 PF08447 PAS fold AANAER_2769 PF00989 PAS fold AANAER_2770 PF01416 tRNA pseudouridine synthase AANAER_2772 PF06750 Bacterial Peptidase A24 N-terminal domain AANAER_2772 PF01478 Type IV leader peptidase family AANAER_2773 PF01255 Putative undecaprenyl diphosphate synthase AANAER_2774 PF02441 Flavoprotein AANAER_2774 PF04127 DNA / pantothenate metabolism flavoprotein AANAER_2775 PF14602 Hexapeptide repeat of succinyl-transferase AANAER_2775 PF12804 MobA-like NTP transferase domain AANAER_2777 PF00271 Helicase conserved C-terminal domain AANAER_2777 PF17191 RecG wedge domain AANAER_2777 PF00270 DEAD/DEAH box helicase AANAER_2778 PF05958 tRNA (Uracil-5-)-methyltransferase AANAER_2779 PF00669 Bacterial flagellin N-terminal helical region AANAER_2779 PF00700 Bacterial flagellin C-terminal helical region AANAER_2780 PF00669 Bacterial flagellin N-terminal helical region AANAER_2780 PF00700 Bacterial flagellin C-terminal helical region AANAER_2783 PF07478 D-ala D-ala ligase C-terminus AANAER_2783 PF01820 D-ala D-ala ligase N-terminus AANAER_2785 PF00205 Thiamine pyrophosphate enzyme, central domain AANAER_2785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AANAER_2785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AANAER_2786 PF00535 Glycosyl transferase family 2 AANAER_2789 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AANAER_2790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AANAER_2790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AANAER_2790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AANAER_2791 PF01370 NAD dependent epimerase/dehydratase family AANAER_2792 PF00483 Nucleotidyl transferase AANAER_2793 PF01209 ubiE/COQ5 methyltransferase family AANAER_2795 PF08666 SAF domain AANAER_2795 PF03102 NeuB family AANAER_2796 PF02348 Cytidylyltransferase AANAER_2797 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AANAER_2798 PF02719 Polysaccharide biosynthesis protein AANAER_2800 PF00154 recA bacterial DNA recombination protein AANAER_2801 PF00113 Enolase, C-terminal TIM barrel domain AANAER_2801 PF03952 Enolase, N-terminal domain AANAER_2804 PF02254 TrkA-N domain AANAER_2804 PF02080 TrkA-C domain AANAER_2804 PF00999 Sodium/hydrogen exchanger family AANAER_2805 PF04055 Radical SAM superfamily AANAER_2805 PF06968 Biotin and Thiamin Synthesis associated domain AANAER_2807 PF01131 DNA topoisomerase AANAER_2807 PF01751 Toprim domain AANAER_2807 PF13368 Topoisomerase C-terminal repeat AANAER_2808 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AANAER_2809 PF02621 Menaquinone biosynthesis AANAER_2810 PF01740 STAS domain AANAER_2810 PF08678 Rsbr N terminal AANAER_2813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2813 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2815 PF00361 Proton-conducting membrane transporter AANAER_2816 PF00361 Proton-conducting membrane transporter AANAER_2816 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AANAER_2817 PF00361 Proton-conducting membrane transporter AANAER_2817 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AANAER_2818 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AANAER_2819 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AANAER_2820 PF12838 4Fe-4S dicluster domain AANAER_2821 PF00146 NADH dehydrogenase AANAER_2822 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AANAER_2822 PF12838 4Fe-4S dicluster domain AANAER_2822 PF00384 Molybdopterin oxidoreductase AANAER_2822 PF01568 Molydopterin dinucleotide binding domain AANAER_2822 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AANAER_2825 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AANAER_2826 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AANAER_2827 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AANAER_2828 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AANAER_2829 PF16450 Proteasomal ATPase OB C-terminal domain AANAER_2829 PF00004 ATPase family associated with various cellular activities (AAA) AANAER_2829 PF17758 Proteasomal ATPase OB N-terminal domain AANAER_2838 PF00872 Transposase, Mutator family AANAER_2839 PF01261 Xylose isomerase-like TIM barrel AANAER_2840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_2842 PF02677 Epoxyqueuosine reductase QueH AANAER_2843 PF02684 Lipid-A-disaccharide synthetase AANAER_2844 PF07977 FabA-like domain AANAER_2845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AANAER_2845 PF00132 Bacterial transferase hexapeptide (six repeats) AANAER_2846 PF06689 ClpX C4-type zinc finger AANAER_2846 PF10431 C-terminal, D2-small domain, of ClpB protein AANAER_2846 PF07724 AAA domain (Cdc48 subfamily) AANAER_2849 PF02574 Homocysteine S-methyltransferase AANAER_2850 PF00677 Lumazine binding domain AANAER_2851 PF01134 Glucose inhibited division protein A AANAER_2851 PF13932 GidA associated domain AANAER_2855 PF00665 Integrase core domain AANAER_2867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2867 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2868 PF00486 Transcriptional regulatory protein, C terminal AANAER_2868 PF00072 Response regulator receiver domain AANAER_2869 PF08448 PAS fold AANAER_2869 PF00990 Diguanylate cyclase, GGDEF domain AANAER_2870 PF00872 Transposase, Mutator family AANAER_2872 PF00884 Sulfatase AANAER_2874 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AANAER_2874 PF13746 4Fe-4S dicluster domain AANAER_2874 PF12801 4Fe-4S binding domain AANAER_2875 PF00117 Glutamine amidotransferase class-I AANAER_2875 PF06418 CTP synthase N-terminus AANAER_2876 PF17768 RecJ OB domain AANAER_2876 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AANAER_2876 PF01368 DHH family AANAER_2876 PF02272 DHHA1 domain AANAER_2879 PF01965 DJ-1/PfpI family AANAER_2883 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AANAER_2883 PF07733 Bacterial DNA polymerase III alpha NTPase domain AANAER_2883 PF14579 Helix-hairpin-helix motif AANAER_2883 PF02811 PHP domain AANAER_2884 PF01975 Survival protein SurE AANAER_2889 PF01967 MoaC family AANAER_2890 PF01165 Ribosomal protein S21 AANAER_2902 PF01027 Inhibitor of apoptosis-promoting Bax1 AANAER_2903 PF02581 Thiamine monophosphate synthase AANAER_2903 PF17792 ThiD2 family AANAER_2904 PF13847 Methyltransferase domain AANAER_2905 PF03840 Preprotein translocase SecG subunit AANAER_2907 PF01765 Ribosome recycling factor AANAER_2908 PF00156 Phosphoribosyl transferase domain AANAER_2910 PF12832 MFS_1 like family AANAER_2912 PF03883 Peroxide stress protein YaaA AANAER_2914 PF02810 SEC-C motif AANAER_2918 PF03167 Uracil DNA glycosylase superfamily AANAER_2919 PF04011 LemA family AANAER_2920 PF04536 TPM domain AANAER_2922 PF13419 Haloacid dehalogenase-like hydrolase AANAER_2926 PF00571 CBS domain AANAER_2926 PF01595 Cyclin M transmembrane N-terminal domain AANAER_2933 PF03600 Citrate transporter AANAER_2934 PF07690 Major Facilitator Superfamily AANAER_2936 PF01053 Cys/Met metabolism PLP-dependent enzyme AANAER_2937 PF02082 Transcriptional regulator AANAER_2938 PF00291 Pyridoxal-phosphate dependent enzyme AANAER_2940 PF01507 Phosphoadenosine phosphosulfate reductase family AANAER_2941 PF01507 Phosphoadenosine phosphosulfate reductase family AANAER_2942 PF00009 Elongation factor Tu GTP binding domain AANAER_2943 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AANAER_2943 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AANAER_2944 PF00266 Aminotransferase class-V AANAER_2945 PF00149 Calcineurin-like phosphoesterase AANAER_2947 PF00011 Hsp20/alpha crystallin family AANAER_2949 PF14403 Circularly permuted ATP-grasp type 2 AANAER_2950 PF01841 Transglutaminase-like superfamily AANAER_2950 PF08379 Bacterial transglutaminase-like N-terminal region AANAER_2954 PF14403 Circularly permuted ATP-grasp type 2 AANAER_2957 PF00005 ABC transporter AANAER_2957 PF02687 FtsX-like permease family AANAER_2957 PF12704 MacB-like periplasmic core domain AANAER_2958 PF00005 ABC transporter AANAER_2963 PF00149 Calcineurin-like phosphoesterase AANAER_2964 PF00486 Transcriptional regulatory protein, C terminal AANAER_2964 PF00072 Response regulator receiver domain AANAER_2965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2965 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2965 PF00672 HAMP domain AANAER_2967 PF13536 Putative multidrug resistance efflux transporter AANAER_2973 PF00072 Response regulator receiver domain AANAER_2973 PF00486 Transcriptional regulatory protein, C terminal AANAER_2975 PF02511 Thymidylate synthase complementing protein AANAER_2976 PF03458 UPF0126 domain AANAER_2977 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AANAER_2977 PF07992 Pyridine nucleotide-disulphide oxidoreductase AANAER_2978 PF04055 Radical SAM superfamily AANAER_2979 PF02347 Glycine cleavage system P-protein AANAER_2980 PF02347 Glycine cleavage system P-protein AANAER_2981 PF01597 Glycine cleavage H-protein AANAER_2982 PF01571 Aminomethyltransferase folate-binding domain AANAER_2982 PF08669 Glycine cleavage T-protein C-terminal barrel domain AANAER_2983 PF00578 AhpC/TSA family AANAER_2983 PF10417 C-terminal domain of 1-Cys peroxiredoxin AANAER_2985 PF00486 Transcriptional regulatory protein, C terminal AANAER_2985 PF00072 Response regulator receiver domain AANAER_2986 PF00512 His Kinase A (phospho-acceptor) domain AANAER_2986 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AANAER_2986 PF00989 PAS fold AANAER_2987 PF02911 Formyl transferase, C-terminal domain AANAER_2987 PF00551 Formyl transferase AANAER_2989 PF02075 Crossover junction endodeoxyribonuclease RuvC