ABED_0679 eccae1c676a6da2eb4f5e4a1540c023d 414 Pfam PF03929 PepSY-associated TM region 7 401 2.2E-62 T 14-10-2018 IPR005625 PepSY-associated TM protein ABED_0200 073e56c5c50c65714abd7d404b4f3419 272 Pfam PF02569 Pantoate-beta-alanine ligase 3 270 1.4E-94 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABED_0200 073e56c5c50c65714abd7d404b4f3419 272 Gene3D G3DSA:3.30.1300.10 173 272 7.2E-26 T 14-10-2018 ABED_0200 073e56c5c50c65714abd7d404b4f3419 272 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 59 2.7E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABED_0200 073e56c5c50c65714abd7d404b4f3419 272 SUPERFAMILY SSF52374 2 272 9.92E-95 T 14-10-2018 ABED_0200 073e56c5c50c65714abd7d404b4f3419 272 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 272 1.6E-99 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABED_0200 073e56c5c50c65714abd7d404b4f3419 272 Gene3D G3DSA:3.40.50.620 1 172 9.4E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0200 073e56c5c50c65714abd7d404b4f3419 272 Hamap MF_00158 Pantothenate synthetase [panC]. 2 272 36.905 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 SMART SM00562 1 137 9.4E-81 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 Gene3D G3DSA:3.30.70.141 1 137 2.5E-58 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 5.2E-55 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 SUPERFAMILY SSF54919 1 136 2.1E-55 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 34.762 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 1.3E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 1.3E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 1.3E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 1.3E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0274 3a41ae24a1c62bbc8b04826d975b8915 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 1.3E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABED_0741 f6262121742270ac529b0121a1ab8367 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 4.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_0741 f6262121742270ac529b0121a1ab8367 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 4.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_0741 f6262121742270ac529b0121a1ab8367 197 SUPERFAMILY SSF46689 5 66 6.16E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0741 f6262121742270ac529b0121a1ab8367 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 55 4.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_0741 f6262121742270ac529b0121a1ab8367 197 Gene3D G3DSA:1.10.357.10 5 196 2.4E-40 T 14-10-2018 ABED_0741 f6262121742270ac529b0121a1ab8367 197 Pfam PF13972 Bacterial transcriptional repressor 69 183 4.8E-14 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 SUPERFAMILY SSF56281 5 258 4.06E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 Pfam PF12706 Beta-lactamase superfamily domain 45 221 2.9E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 SMART SM00471 478 726 1.5E-6 T 14-10-2018 IPR003607 HD/PDEase domain ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 SMART SM00065 288 461 5.7E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 SUPERFAMILY SSF109604 459 742 4.52E-15 T 14-10-2018 ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 Pfam PF01590 GAF domain 290 451 3.7E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 Pfam PF13487 HD domain 643 708 1.1E-18 T 14-10-2018 ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 Gene3D G3DSA:1.10.3210.10 629 766 1.4E-25 T 14-10-2018 ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 Gene3D G3DSA:1.10.3210.10 463 578 2.0E-16 T 14-10-2018 ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 Gene3D G3DSA:3.30.450.40 270 462 2.2E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 Gene3D G3DSA:3.60.15.10 4 269 2.7E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 SMART SM00849 18 224 2.0E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 Pfam PF01966 HD domain 483 576 1.8E-5 T 14-10-2018 IPR006674 HD domain ABED_0875 f8d4b60bd9c01485a122f77fc6371c66 777 SUPERFAMILY SSF55781 274 462 2.4E-25 T 14-10-2018 ABED_1570 c8f535714ffb394659ae2351ec5b2881 707 SMART SM00283 442 691 8.7E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1570 c8f535714ffb394659ae2351ec5b2881 707 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 501 655 1.8E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1570 c8f535714ffb394659ae2351ec5b2881 707 SUPERFAMILY SSF58104 413 678 2.49E-53 T 14-10-2018 ABED_1570 c8f535714ffb394659ae2351ec5b2881 707 SMART SM01358 29 256 2.3E-13 T 14-10-2018 IPR032255 Helical bimodular sensor domain ABED_1570 c8f535714ffb394659ae2351ec5b2881 707 Gene3D G3DSA:1.10.287.950 391 684 1.4E-55 T 14-10-2018 ABED_0012 0b38c52b4c8f4f8ab354461153ba6185 248 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 25 244 1.3E-56 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ABED_0012 0b38c52b4c8f4f8ab354461153ba6185 248 Pfam PF13531 Bacterial extracellular solute-binding protein 20 245 8.1E-42 T 14-10-2018 ABED_0012 0b38c52b4c8f4f8ab354461153ba6185 248 SUPERFAMILY SSF53850 19 246 2.42E-52 T 14-10-2018 ABED_0012 0b38c52b4c8f4f8ab354461153ba6185 248 PIRSF PIRSF004846 4 248 1.3E-53 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ABED_0012 0b38c52b4c8f4f8ab354461153ba6185 248 Gene3D G3DSA:3.40.190.10 24 245 2.6E-65 T 14-10-2018 ABED_0012 0b38c52b4c8f4f8ab354461153ba6185 248 Gene3D G3DSA:3.40.190.10 99 207 2.6E-65 T 14-10-2018 ABED_0184 f1ae253de07097ea0d504f505636842f 341 Hamap MF_00219 Dihydroorotase [pyrC]. 5 340 43.769 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0184 f1ae253de07097ea0d504f505636842f 341 Pfam PF01979 Amidohydrolase family 14 299 9.5E-8 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABED_0184 f1ae253de07097ea0d504f505636842f 341 SUPERFAMILY SSF51556 5 339 5.38E-112 T 14-10-2018 IPR032466 Metal-dependent hydrolase ABED_0184 f1ae253de07097ea0d504f505636842f 341 PIRSF PIRSF001237 3 341 3.2E-121 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0184 f1ae253de07097ea0d504f505636842f 341 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 339 3.4E-121 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0184 f1ae253de07097ea0d504f505636842f 341 Gene3D G3DSA:3.20.20.140 2 341 1.4E-97 T 14-10-2018 ABED_0184 f1ae253de07097ea0d504f505636842f 341 ProSitePatterns PS00482 Dihydroorotase signature 1. 14 22 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0184 f1ae253de07097ea0d504f505636842f 341 ProSitePatterns PS00483 Dihydroorotase signature 2. 242 253 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0239 0d77aeecd450997c45053b904b70c199 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 5.4E-18 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis ABED_0239 0d77aeecd450997c45053b904b70c199 66 Gene3D G3DSA:3.10.20.30 1 66 1.2E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily ABED_0239 0d77aeecd450997c45053b904b70c199 66 Pfam PF02597 ThiS family 4 66 5.5E-12 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ABED_0239 0d77aeecd450997c45053b904b70c199 66 SUPERFAMILY SSF54285 2 65 6.05E-16 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 Pfam PF04055 Radical SAM superfamily 18 175 4.6E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 186 275 1.6E-11 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 SMART SM00876 186 276 1.8E-22 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 TIGRFAM TIGR00433 bioB: biotin synthase 3 274 5.5E-91 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 PIRSF PIRSF001619 1 281 3.4E-86 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 SMART SM00729 9 217 6.2E-27 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 Hamap MF_01694 Biotin synthase [bioB]. 2 277 33.985 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 Gene3D G3DSA:3.20.20.70 1 277 5.4E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_2047 5532d259a64d8cb6baf64eb6b661dd29 282 SUPERFAMILY SSF102114 4 261 1.03E-56 T 14-10-2018 ABED_0390 5feebe38c1a1a7f7460b2b715c6d14b9 411 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 393 3.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0390 5feebe38c1a1a7f7460b2b715c6d14b9 411 Gene3D G3DSA:1.10.287.130 161 265 4.2E-14 T 14-10-2018 ABED_0390 5feebe38c1a1a7f7460b2b715c6d14b9 411 Gene3D G3DSA:3.30.565.10 266 408 1.3E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0390 5feebe38c1a1a7f7460b2b715c6d14b9 411 SUPERFAMILY SSF47384 197 264 3.73E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0390 5feebe38c1a1a7f7460b2b715c6d14b9 411 SUPERFAMILY SSF55874 299 402 1.57E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 278 1.5E-55 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 Gene3D G3DSA:3.40.50.620 2 63 4.8E-5 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 SUPERFAMILY SSF52374 16 158 3.13E-14 T 14-10-2018 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 Gene3D G3DSA:2.40.30.30 162 277 7.9E-25 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 SUPERFAMILY SSF82114 146 278 3.05E-30 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 Gene3D G3DSA:3.40.50.620 64 160 3.8E-17 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 Pfam PF06574 FAD synthetase 12 39 6.1E-5 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 Pfam PF06574 FAD synthetase 73 138 7.2E-6 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 Pfam PF01687 Riboflavin kinase 157 277 5.4E-24 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 PIRSF PIRSF004491 42 281 1.6E-55 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 PIRSF PIRSF004491 1 65 3.4E-6 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABED_1669 a3e0c946ea1edb8ebb6be4ae079911fd 281 SMART SM00904 156 278 9.7E-37 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ABED_0959 4e6687aa226e1add2ff7200f12e5ff97 355 SMART SM01329 5 349 2.0E-197 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABED_0959 4e6687aa226e1add2ff7200f12e5ff97 355 Gene3D G3DSA:3.40.718.10 2 355 9.7E-143 T 14-10-2018 ABED_0959 4e6687aa226e1add2ff7200f12e5ff97 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 349 1.4E-133 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABED_0959 4e6687aa226e1add2ff7200f12e5ff97 355 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 353 49.693 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ABED_0959 4e6687aa226e1add2ff7200f12e5ff97 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 240 259 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ABED_0959 4e6687aa226e1add2ff7200f12e5ff97 355 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 341 7.1E-154 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ABED_0959 4e6687aa226e1add2ff7200f12e5ff97 355 SUPERFAMILY SSF53659 4 353 1.98E-124 T 14-10-2018 ABED_1942 b585c554d11e30fdf337b8c4f8b5ca51 215 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 215 35.982 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_1942 b585c554d11e30fdf337b8c4f8b5ca51 215 Pfam PF03167 Uracil DNA glycosylase superfamily 49 206 2.1E-23 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_1942 b585c554d11e30fdf337b8c4f8b5ca51 215 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 2 209 2.6E-79 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_1942 b585c554d11e30fdf337b8c4f8b5ca51 215 SMART SM00987 44 205 3.1E-35 T 14-10-2018 ABED_1942 b585c554d11e30fdf337b8c4f8b5ca51 215 Gene3D G3DSA:3.40.470.10 1 215 1.0E-88 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_1942 b585c554d11e30fdf337b8c4f8b5ca51 215 SUPERFAMILY SSF52141 2 215 6.98E-86 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_1942 b585c554d11e30fdf337b8c4f8b5ca51 215 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 52 61 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_1942 b585c554d11e30fdf337b8c4f8b5ca51 215 SMART SM00986 44 205 3.1E-35 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_1650 378179f396c7021f7837cfc224b47092 191 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 179 1.3E-73 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ABED_1650 378179f396c7021f7837cfc224b47092 191 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 185 4.0E-58 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ABED_1650 378179f396c7021f7837cfc224b47092 191 SUPERFAMILY SSF51182 1 183 1.51E-75 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_1650 378179f396c7021f7837cfc224b47092 191 Gene3D G3DSA:2.60.120.10 1 186 1.9E-74 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_1650 378179f396c7021f7837cfc224b47092 191 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 178 4.1E-73 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ABED_1226 003ac1fd22eed0195cfae2d241fe523e 373 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 107 327 5.3E-34 T 14-10-2018 IPR003770 Endolytic murein transglycosylase ABED_1226 003ac1fd22eed0195cfae2d241fe523e 373 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 21 337 27.185 T 14-10-2018 IPR003770 Endolytic murein transglycosylase ABED_1226 003ac1fd22eed0195cfae2d241fe523e 373 Pfam PF02618 YceG-like family 54 326 8.5E-57 T 14-10-2018 IPR003770 Endolytic murein transglycosylase ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 Gene3D G3DSA:1.10.8.10 139 184 1.3E-6 T 14-10-2018 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 Pfam PF14520 Helix-hairpin-helix domain 70 126 3.0E-15 T 14-10-2018 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 SMART SM00278 106 125 0.47 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 SMART SM00278 71 90 71.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 Gene3D G3DSA:1.10.150.20 65 136 7.0E-22 T 14-10-2018 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 Pfam PF07499 RuvA, C-terminal domain 145 183 2.7E-5 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 SUPERFAMILY SSF50249 1 61 4.74E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 Gene3D G3DSA:2.40.50.140 1 64 4.8E-17 T 14-10-2018 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 184 26.781 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 183 3.8E-47 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 Pfam PF01330 RuvA N terminal domain 1 60 8.7E-16 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABED_0692 eb77842064a8a89351d9b794d7a947e8 185 SUPERFAMILY SSF47781 63 130 1.41E-18 T 14-10-2018 IPR010994 RuvA domain 2-like ABED_1287 075595807e20430939b669135804404b 377 SMART SM00865 222 341 3.8E-48 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 PRINTS PR00423 Cell division protein FtsZ signature 110 130 1.1E-35 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 PRINTS PR00423 Cell division protein FtsZ signature 201 223 1.1E-35 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 PRINTS PR00423 Cell division protein FtsZ signature 227 248 1.1E-35 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 PRINTS PR00423 Cell division protein FtsZ signature 138 159 1.1E-35 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 25 185 1.8E-36 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 Gene3D G3DSA:3.40.50.1440 22 333 3.7E-105 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 21 355 2.1E-113 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ABED_1287 075595807e20430939b669135804404b 377 Pfam PF12327 FtsZ family, C-terminal domain 237 333 1.6E-25 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal ABED_1287 075595807e20430939b669135804404b 377 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 21 360 34.435 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ABED_1287 075595807e20430939b669135804404b 377 SUPERFAMILY SSF52490 25 217 2.75E-61 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 SUPERFAMILY SSF55307 222 335 3.89E-38 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 ABED_1287 075595807e20430939b669135804404b 377 SMART SM00864 25 217 9.4E-97 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 809 0.0 T 14-10-2018 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Gene3D G3DSA:3.90.199.10 35 487 1.5E-208 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Gene3D G3DSA:3.30.1360.40 238 333 1.5E-208 T 14-10-2018 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Gene3D G3DSA:1.10.268.10 370 466 1.5E-208 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 810 24.234 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 472 3.4E-157 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 SMART SM00434 13 465 8.4E-278 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 SUPERFAMILY SSF101904 499 819 3.01E-103 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 762 808 3.6E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 711 752 3.4E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 659 707 2.5E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 505 549 1.5E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 554 603 1.3E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 611 654 1.2E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 Gene3D G3DSA:2.120.10.90 496 833 1.2E-114 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABED_1619 9aaf73f00a68a17c5b75fba6cae63993 860 SUPERFAMILY SSF56719 33 487 3.53E-176 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABED_1564 152bab96b98a0cfe1e40e785ebeee71e 383 Gene3D G3DSA:3.90.1150.10 251 383 1.9E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1564 152bab96b98a0cfe1e40e785ebeee71e 383 SUPERFAMILY SSF53383 17 382 1.99E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1564 152bab96b98a0cfe1e40e785ebeee71e 383 Gene3D G3DSA:3.40.640.10 2 250 3.7E-61 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1564 152bab96b98a0cfe1e40e785ebeee71e 383 PIRSF PIRSF001434 1 383 3.4E-110 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABED_1564 152bab96b98a0cfe1e40e785ebeee71e 383 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 193 207 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABED_1564 152bab96b98a0cfe1e40e785ebeee71e 383 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 22 382 2.4E-108 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABED_0654 ed5a9d59df8ce76c1e8857c907935f39 125 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 7 125 2.4E-39 T 14-10-2018 IPR014171 TonB system transport protein ExbD type-2 GO:0016020|GO:0055085 ABED_0654 ed5a9d59df8ce76c1e8857c907935f39 125 Pfam PF02472 Biopolymer transport protein ExbD/TolR 6 124 1.9E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ABED_0654 ed5a9d59df8ce76c1e8857c907935f39 125 Gene3D G3DSA:3.30.420.270 56 121 2.8E-7 T 14-10-2018 ABED_1986 8ac7a473cb61eebe46de2063ea92c234 452 Gene3D G3DSA:3.20.20.450 207 448 1.4E-59 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1986 8ac7a473cb61eebe46de2063ea92c234 452 SMART SM00267 35 197 1.7E-7 T 14-10-2018 IPR000160 GGDEF domain ABED_1986 8ac7a473cb61eebe46de2063ea92c234 452 SUPERFAMILY SSF55073 51 195 3.3E-18 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1986 8ac7a473cb61eebe46de2063ea92c234 452 SUPERFAMILY SSF141868 215 447 6.02E-59 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1986 8ac7a473cb61eebe46de2063ea92c234 452 SMART SM00052 208 452 3.7E-45 T 14-10-2018 IPR001633 EAL domain ABED_1986 8ac7a473cb61eebe46de2063ea92c234 452 Pfam PF00990 Diguanylate cyclase, GGDEF domain 48 189 2.4E-14 T 14-10-2018 IPR000160 GGDEF domain ABED_1986 8ac7a473cb61eebe46de2063ea92c234 452 Gene3D G3DSA:3.30.70.270 32 197 1.0E-17 T 14-10-2018 ABED_1986 8ac7a473cb61eebe46de2063ea92c234 452 Pfam PF00563 EAL domain 214 447 5.8E-56 T 14-10-2018 IPR001633 EAL domain ABED_0385 d051351041134927558dff35d3ae2e60 995 SUPERFAMILY SSF141259 359 430 3.92E-19 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily ABED_0385 d051351041134927558dff35d3ae2e60 995 Gene3D G3DSA:3.30.2060.10 107 192 9.8E-24 T 14-10-2018 ABED_0385 d051351041134927558dff35d3ae2e60 995 SUPERFAMILY SSF52540 662 867 1.16E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0385 d051351041134927558dff35d3ae2e60 995 Gene3D G3DSA:3.40.50.300 360 868 1.4E-195 T 14-10-2018 ABED_0385 d051351041134927558dff35d3ae2e60 995 Pfam PF00271 Helicase conserved C-terminal domain 681 789 2.4E-17 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0385 d051351041134927558dff35d3ae2e60 995 Gene3D G3DSA:2.30.30.840 365 423 1.4E-195 T 14-10-2018 ABED_0385 d051351041134927558dff35d3ae2e60 995 Pfam PF03461 TRCF domain 884 974 4.0E-21 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ABED_0385 d051351041134927558dff35d3ae2e60 995 SMART SM00982 883 983 1.1E-29 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ABED_0385 d051351041134927558dff35d3ae2e60 995 SMART SM00490 706 790 9.1E-18 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0385 d051351041134927558dff35d3ae2e60 995 Gene3D G3DSA:3.90.1150.50 879 988 4.6E-22 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain ABED_0385 d051351041134927558dff35d3ae2e60 995 Gene3D G3DSA:3.40.50.300 424 661 1.4E-195 T 14-10-2018 ABED_0385 d051351041134927558dff35d3ae2e60 995 SMART SM01058 361 458 3.0E-37 T 14-10-2018 IPR003711 CarD-like/TRCF domain ABED_0385 d051351041134927558dff35d3ae2e60 995 SMART SM00487 482 676 1.1E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_0385 d051351041134927558dff35d3ae2e60 995 SUPERFAMILY SSF143517 870 987 4.97E-26 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain ABED_0385 d051351041134927558dff35d3ae2e60 995 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 14 977 23.621 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ABED_0385 d051351041134927558dff35d3ae2e60 995 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 308 956 3.8E-251 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ABED_0385 d051351041134927558dff35d3ae2e60 995 SUPERFAMILY SSF52540 16 261 4.25E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0385 d051351041134927558dff35d3ae2e60 995 Pfam PF00270 DEAD/DEAH box helicase 487 644 1.7E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABED_0385 d051351041134927558dff35d3ae2e60 995 Pfam PF02559 CarD-like/TRCF domain 362 456 1.4E-22 T 14-10-2018 IPR003711 CarD-like/TRCF domain ABED_0385 d051351041134927558dff35d3ae2e60 995 SUPERFAMILY SSF52540 428 663 3.14E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 467 34.471 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.0E-25 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 2.0E-25 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 2.0E-25 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 2.0E-25 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 SUPERFAMILY SSF52374 5 317 1.42E-86 T 14-10-2018 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 318 7.4E-121 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 SMART SM00840 346 410 0.0025 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 Pfam PF09190 DALR domain 349 406 1.8E-7 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 SUPERFAMILY SSF47323 321 466 6.8E-30 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 466 1.5E-158 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 Gene3D G3DSA:3.40.50.620 1 310 6.0E-118 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0227 dd083a63b7712a038d285daa949a6ee2 467 Gene3D G3DSA:1.20.120.640 311 466 3.5E-31 T 14-10-2018 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 Gene3D G3DSA:3.30.70.1560 144 246 1.3E-40 T 14-10-2018 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 Pfam PF00849 RNA pseudouridylate synthase 83 227 1.1E-18 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 120 134 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 Gene3D G3DSA:3.10.290.10 18 81 2.3E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 Gene3D G3DSA:3.30.70.580 84 254 1.3E-40 T 14-10-2018 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 SMART SM00363 20 78 7.9E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 SUPERFAMILY SSF55174 20 74 1.12E-13 T 14-10-2018 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 Pfam PF01479 S4 domain 21 66 1.5E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 87 257 1.7E-44 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABED_0050 9c16286b52403c41ee7196a747e7cac2 275 SUPERFAMILY SSF55120 82 269 5.4E-29 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 Gene3D G3DSA:2.40.30.10 328 432 3.8E-31 T 14-10-2018 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 PRINTS PR00315 GTP-binding elongation factor signature 107 117 6.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 PRINTS PR00315 GTP-binding elongation factor signature 160 169 6.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 PRINTS PR00315 GTP-binding elongation factor signature 87 95 6.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 PRINTS PR00315 GTP-binding elongation factor signature 123 134 6.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 PRINTS PR00315 GTP-binding elongation factor signature 26 39 6.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 Pfam PF00009 Elongation factor Tu GTP binding domain 23 224 5.7E-44 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 211 2.5E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 468 52.37 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 SUPERFAMILY SSF50447 242 326 1.25E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 Gene3D G3DSA:2.40.30.10 238 326 3.0E-28 T 14-10-2018 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 SUPERFAMILY SSF52540 17 234 3.1E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 Gene3D G3DSA:3.40.50.300 3 237 2.8E-76 T 14-10-2018 ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 SUPERFAMILY SSF50465 331 432 3.12E-30 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ABED_1970 0c72fd1a5605ebccbd7892db187d6418 469 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 431 7.1E-196 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABED_0120 06830520939c81ac31dfb5ca789a4798 158 Pfam PF04608 Phosphatidylglycerophosphatase A 6 149 3.7E-42 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 ABED_0120 06830520939c81ac31dfb5ca789a4798 158 PIRSF PIRSF006162 1 157 1.6E-41 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ABED_0120 06830520939c81ac31dfb5ca789a4798 158 SUPERFAMILY SSF101307 3 149 4.58E-35 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 SUPERFAMILY SSF53244 278 425 3.05E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 425 26.106 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 SUPERFAMILY SSF53623 58 274 2.88E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 Pfam PF08245 Mur ligase middle domain 64 257 1.7E-38 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 Pfam PF02875 Mur ligase family, glutamate ligase domain 278 358 3.4E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 Gene3D G3DSA:3.40.1190.10 56 281 2.0E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 46 425 3.9E-121 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 62 85 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 ABED_0489 a6463ced1c7735c52186a215856c3a92 426 Gene3D G3DSA:3.90.190.20 282 426 5.1E-51 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_1558 d6e8b7f3ac0e8c2b22f89ea20bafb7ca 318 SUPERFAMILY SSF52540 90 276 9.02E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1558 d6e8b7f3ac0e8c2b22f89ea20bafb7ca 318 PIRSF PIRSF028756 17 317 2.7E-116 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 ABED_1558 d6e8b7f3ac0e8c2b22f89ea20bafb7ca 318 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 59 283 3.4E-104 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related ABED_1558 d6e8b7f3ac0e8c2b22f89ea20bafb7ca 318 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 58 284 5.6E-114 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 ABED_1558 d6e8b7f3ac0e8c2b22f89ea20bafb7ca 318 Gene3D G3DSA:3.40.50.300 8 305 8.4E-95 T 14-10-2018 ABED_0314 a68231b92fb6e31d3238475755947acd 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 150 9.2E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_0314 a68231b92fb6e31d3238475755947acd 665 SUPERFAMILY SSF56935 23 665 2.16E-117 T 14-10-2018 ABED_0314 a68231b92fb6e31d3238475755947acd 665 Gene3D G3DSA:2.40.170.20 35 665 2.0E-151 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_0314 a68231b92fb6e31d3238475755947acd 665 Pfam PF00593 TonB dependent receptor 247 653 4.3E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 Pfam PF00028 Cadherin domain 477 562 2.6E-11 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 Pfam PF14252 Domain of unknown function (DUF4347) 76 226 1.2E-45 T 14-10-2018 IPR025592 Domain of unknown function DUF4347 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 Gene3D G3DSA:2.60.40.10 2400 2473 1.5E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 Pfam PF05345 Putative Ig domain 2213 2253 2.8E-7 T 14-10-2018 IPR008009 Putative Ig ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SMART SM00112 1422 1513 0.12 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SMART SM00112 2101 2179 0.038 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SMART SM00112 493 570 8.4E-13 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 Gene3D G3DSA:2.60.40.10 2175 2265 3.0E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 Gene3D G3DSA:2.60.40.60 466 564 2.7E-17 T 14-10-2018 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SUPERFAMILY SSF49313 2178 2266 3.66E-11 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SUPERFAMILY SSF49313 477 564 7.46E-16 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SMART SM00736 2073 2178 0.15 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SMART SM00736 2179 2271 0.049 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SMART SM00736 470 569 0.0063 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SUPERFAMILY SSF49313 2080 2177 2.88E-5 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1219 1275 0.001 T 14-10-2018 IPR010221 VCBS repeat ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1332 1400 8.0E-6 T 14-10-2018 IPR010221 VCBS repeat ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 785 846 5.4E-7 T 14-10-2018 IPR010221 VCBS repeat ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1444 1522 2.3E-8 T 14-10-2018 IPR010221 VCBS repeat ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2098 2186 5.7E-6 T 14-10-2018 IPR010221 VCBS repeat ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 389 483 2.5E-8 T 14-10-2018 IPR010221 VCBS repeat ABED_0976 379b6e7b1bedd374498f16d6c06cd7d7 2515 SUPERFAMILY SSF49313 2410 2468 5.58E-6 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Pfam PF07516 SecA Wing and Scaffold domain 587 796 5.5E-58 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Pfam PF02810 SEC-C motif 843 861 6.5E-10 T 14-10-2018 IPR004027 SEC-C motif ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 SUPERFAMILY SSF81886 589 851 1.07E-67 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Gene3D G3DSA:1.10.1200.230 639 723 0.0 T 14-10-2018 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Pfam PF07517 SecA DEAD-like domain 6 399 6.7E-125 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 PRINTS PR00906 SecA protein signature 117 127 9.0E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 PRINTS PR00906 SecA protein signature 63 87 9.0E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 PRINTS PR00906 SecA protein signature 411 424 9.0E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 PRINTS PR00906 SecA protein signature 101 115 9.0E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 PRINTS PR00906 SecA protein signature 171 191 9.0E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 PRINTS PR00906 SecA protein signature 337 359 9.0E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 PRINTS PR00906 SecA protein signature 374 391 9.0E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Gene3D G3DSA:3.40.50.300 415 588 0.0 T 14-10-2018 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 SMART SM00957 5 400 8.7E-274 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 SUPERFAMILY SSF52540 3 413 1.8E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Gene3D G3DSA:3.90.1440.10 230 366 0.0 T 14-10-2018 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Gene3D G3DSA:1.10.3060.10 589 794 0.0 T 14-10-2018 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 ProSitePatterns PS01312 SecA family signature. 498 513 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 SUPERFAMILY SSF52540 415 587 3.85E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 514 9.2E-230 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Gene3D G3DSA:3.40.50.300 15 414 0.0 T 14-10-2018 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Pfam PF00271 Helicase conserved C-terminal domain 432 548 2.7E-6 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 799 19.541 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 Pfam PF01043 SecA preprotein cross-linking domain 234 356 1.7E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 SMART SM00958 229 356 6.7E-66 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ABED_1223 28a9d4b36d7c319a7de017ee7083cee2 872 SUPERFAMILY SSF81767 234 366 3.4E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 ABED_0018 cfc2fbd68084def3f4081e4b018b264b 300 SUPERFAMILY SSF55120 70 281 3.68E-47 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0018 cfc2fbd68084def3f4081e4b018b264b 300 Pfam PF00849 RNA pseudouridylate synthase 80 230 6.4E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0018 cfc2fbd68084def3f4081e4b018b264b 300 Gene3D G3DSA:3.30.2350.10 63 290 1.9E-50 T 14-10-2018 ABED_0018 cfc2fbd68084def3f4081e4b018b264b 300 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 117 131 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Gene3D G3DSA:3.40.50.10050 681 788 1.1E-35 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 303 887 2.9E-240 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 SUPERFAMILY SSF52540 376 559 2.46E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 SUPERFAMILY SSF52156 664 795 2.09E-33 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Gene3D G3DSA:2.40.30.10 789 886 1.3E-31 T 14-10-2018 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Gene3D G3DSA:1.10.10.2480 3 98 1.2E-8 T 14-10-2018 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 SUPERFAMILY SSF50447 790 883 3.74E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Pfam PF00009 Elongation factor Tu GTP binding domain 392 547 7.0E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Gene3D G3DSA:2.40.30.10 559 677 1.0E-35 T 14-10-2018 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 ProSitePatterns PS01176 Initiation factor 2 signature. 839 861 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 308 358 3.8E-12 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 51 2.4E-11 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 389 546 1.2E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Pfam PF11987 Translation-initiation factor 2 676 778 9.9E-35 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Gene3D G3DSA:3.40.50.300 385 558 8.5E-68 T 14-10-2018 ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 SUPERFAMILY SSF50447 560 642 2.65E-20 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_1850 d8e7c340a3e22afa75d69a1f82d48c0b 890 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 886 16.226 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABED_1344 a3071ae16f99183fdd30ce9554b1f7dd 146 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 9 144 4.5E-36 T 14-10-2018 IPR012660 Thioesterase, putative ABED_1344 a3071ae16f99183fdd30ce9554b1f7dd 146 Gene3D G3DSA:3.10.129.10 1 145 2.1E-39 T 14-10-2018 ABED_1344 a3071ae16f99183fdd30ce9554b1f7dd 146 SUPERFAMILY SSF54637 4 144 7.46E-24 T 14-10-2018 IPR029069 HotDog domain superfamily ABED_1344 a3071ae16f99183fdd30ce9554b1f7dd 146 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 4 145 4.4E-47 T 14-10-2018 IPR012660 Thioesterase, putative ABED_0504 49869a75b6ae1559a4fc74db4cf3fda9 156 SUPERFAMILY SSF56024 24 151 3.81E-27 T 14-10-2018 ABED_0504 49869a75b6ae1559a4fc74db4cf3fda9 156 Pfam PF13091 PLD-like domain 34 151 1.6E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABED_0504 49869a75b6ae1559a4fc74db4cf3fda9 156 Gene3D G3DSA:3.30.870.10 12 156 4.1E-32 T 14-10-2018 ABED_0504 49869a75b6ae1559a4fc74db4cf3fda9 156 SMART SM00155 102 129 2.9E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABED_2067 b48a655ba004cf25313c4db8a84986c8 538 Pfam PF00117 Glutamine amidotransferase class-I 299 531 7.5E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase ABED_2067 b48a655ba004cf25313c4db8a84986c8 538 SUPERFAMILY SSF52317 286 534 8.99E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_2067 b48a655ba004cf25313c4db8a84986c8 538 Gene3D G3DSA:3.40.50.300 1 282 3.3E-125 T 14-10-2018 ABED_2067 b48a655ba004cf25313c4db8a84986c8 538 SUPERFAMILY SSF52540 1 267 1.04E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_2067 b48a655ba004cf25313c4db8a84986c8 538 Hamap MF_01227 CTP synthase [pyrG]. 2 538 48.912 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABED_2067 b48a655ba004cf25313c4db8a84986c8 538 Gene3D G3DSA:3.40.50.880 283 538 1.4E-98 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_2067 b48a655ba004cf25313c4db8a84986c8 538 TIGRFAM TIGR00337 PyrG: CTP synthase 1 532 1.5E-233 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABED_2067 b48a655ba004cf25313c4db8a84986c8 538 Pfam PF06418 CTP synthase N-terminus 3 265 3.7E-120 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABED_0010 d8872e230a2113e9d260e9cf62934252 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 220 1.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_0010 d8872e230a2113e9d260e9cf62934252 235 SUPERFAMILY SSF161098 11 218 1.83E-46 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0010 d8872e230a2113e9d260e9cf62934252 235 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 222 7.6E-69 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ABED_0010 d8872e230a2113e9d260e9cf62934252 235 Gene3D G3DSA:1.10.3720.10 4 228 1.2E-50 T 14-10-2018 IPR035906 MetI-like superfamily ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 2.3E-68 T 14-10-2018 ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 Gene3D G3DSA:3.40.50.720 1 247 2.6E-84 T 14-10-2018 ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 7.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 1.2E-6 T 14-10-2018 ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 SUPERFAMILY SSF51735 5 246 2.93E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1865 1b0f8319e0ddae6062c46162616d9e38 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 7.1E-99 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABED_1282 bfeeea1b55e8f0800f5195493a15b285 431 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 8 430 21.519 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ABED_1282 bfeeea1b55e8f0800f5195493a15b285 431 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 11 419 4.7E-125 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ABED_1282 bfeeea1b55e8f0800f5195493a15b285 431 Gene3D G3DSA:1.20.1530.10 5 264 1.5E-85 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily ABED_1282 bfeeea1b55e8f0800f5195493a15b285 431 Gene3D G3DSA:1.20.1530.10 279 428 3.9E-43 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily ABED_1282 bfeeea1b55e8f0800f5195493a15b285 431 Pfam PF06965 Na+/H+ antiporter 1 10 419 6.2E-135 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ABED_0004 cca5d300375b3d4f54144ee133739656 323 Gene3D G3DSA:3.50.50.60 7 299 1.6E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0004 cca5d300375b3d4f54144ee133739656 323 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 9 294 5.9E-51 T 14-10-2018 ABED_0004 cca5d300375b3d4f54144ee133739656 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 2.3E-14 T 14-10-2018 ABED_0004 cca5d300375b3d4f54144ee133739656 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.3E-14 T 14-10-2018 ABED_0004 cca5d300375b3d4f54144ee133739656 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 2.3E-14 T 14-10-2018 ABED_0004 cca5d300375b3d4f54144ee133739656 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 2.3E-14 T 14-10-2018 ABED_0004 cca5d300375b3d4f54144ee133739656 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.6E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_0004 cca5d300375b3d4f54144ee133739656 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 160 184 1.6E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_0004 cca5d300375b3d4f54144ee133739656 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 303 1.6E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_0004 cca5d300375b3d4f54144ee133739656 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 216 232 1.6E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_0004 cca5d300375b3d4f54144ee133739656 323 Gene3D G3DSA:3.50.50.60 137 255 1.6E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0004 cca5d300375b3d4f54144ee133739656 323 SUPERFAMILY SSF51905 1 318 4.12E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 Gene3D G3DSA:1.20.1330.10 43 146 8.8E-40 T 14-10-2018 ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 PRINTS PR00207 Flagellin signature 109 132 6.1E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 PRINTS PR00207 Flagellin signature 35 52 6.1E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 PRINTS PR00207 Flagellin signature 74 93 6.1E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 Pfam PF00700 Bacterial flagellin C-terminal helical region 222 306 2.0E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 Gene3D G3DSA:1.20.58.1830 3 31 8.8E-40 T 14-10-2018 ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 Gene3D G3DSA:1.10.8.410 253 307 3.8E-18 T 14-10-2018 ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 SUPERFAMILY SSF64518 1 307 2.88E-67 T 14-10-2018 ABED_2065 bcb4805a5aa3154bebd51967bf7d147c 307 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.3E-31 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 424 1.5E-167 T 14-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 Pfam PF00330 Aconitase family (aconitate hydratase) 7 418 1.9E-91 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 Gene3D G3DSA:3.30.499.10 278 426 6.1E-53 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 SUPERFAMILY SSF53732 1 425 3.92E-138 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 Gene3D G3DSA:3.30.499.20 4 275 8.0E-92 T 14-10-2018 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 PRINTS PR00415 Aconitase family signature 127 142 1.4E-22 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 PRINTS PR00415 Aconitase family signature 359 372 1.4E-22 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 PRINTS PR00415 Aconitase family signature 189 202 1.4E-22 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 PRINTS PR00415 Aconitase family signature 303 314 1.4E-22 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 PRINTS PR00415 Aconitase family signature 113 126 1.4E-22 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 PRINTS PR00415 Aconitase family signature 203 216 1.4E-22 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 426 47.239 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 ProSitePatterns PS01244 Aconitase family signature 2. 359 372 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABED_0079 cf4df437684409eacca2de5257a4bc86 426 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 424 4.5E-155 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 SUPERFAMILY SSF48108 392 538 1.28E-42 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Gene3D G3DSA:3.40.50.20 515 656 2.9E-59 T 14-10-2018 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 667 868 1.1E-36 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 126 332 1.8E-64 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Gene3D G3DSA:3.40.50.1380 943 1080 1.0E-36 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 832 839 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 419 536 2.9E-36 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 SUPERFAMILY SSF56059 126 397 9.72E-100 T 14-10-2018 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Gene3D G3DSA:3.30.470.20 659 942 2.0E-112 T 14-10-2018 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 SMART SM01096 416 537 3.6E-59 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 SMART SM00851 962 1049 4.2E-30 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 6.3E-59 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 166 178 6.3E-59 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 6.3E-59 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.3E-59 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 6.3E-59 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 6.3E-59 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.3E-59 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Gene3D G3DSA:3.30.470.20 117 399 4.8E-116 T 14-10-2018 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 SUPERFAMILY SSF52440 1 125 8.2E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Gene3D G3DSA:1.10.1030.10 400 512 1.3E-28 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Pfam PF02142 MGS-like domain 966 1049 2.2E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 703 717 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 SUPERFAMILY SSF52440 551 669 2.59E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1070 12.675 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 SUPERFAMILY SSF52335 944 1070 1.31E-35 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 SUPERFAMILY SSF56059 667 940 2.65E-99 T 14-10-2018 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 Gene3D G3DSA:3.40.50.20 1 113 3.9E-45 T 14-10-2018 ABED_1280 ab552deaf52c073e1f4b1b50dec77a3e 1081 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1060 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 SUPERFAMILY SSF47384 721 795 7.85E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 327 542 1.1E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 SMART SM00062 325 541 3.9E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Gene3D G3DSA:3.40.190.10 412 505 3.7E-33 T 14-10-2018 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Pfam PF13426 PAS domain 593 686 1.6E-9 T 14-10-2018 IPR000014 PAS domain ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Gene3D G3DSA:3.30.565.10 797 949 1.3E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 SUPERFAMILY SSF55874 794 947 7.94E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Gene3D G3DSA:3.30.450.20 578 713 1.5E-11 T 14-10-2018 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Gene3D G3DSA:3.40.190.10 24 285 4.6E-52 T 14-10-2018 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 SUPERFAMILY SSF53850 326 542 1.09E-24 T 14-10-2018 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 SMART SM00387 837 949 2.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 SMART SM00091 582 648 3.1E-4 T 14-10-2018 IPR000014 PAS domain ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 839 948 1.7E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Gene3D G3DSA:3.40.190.10 102 197 4.6E-52 T 14-10-2018 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Gene3D G3DSA:3.40.190.10 318 541 3.7E-33 T 14-10-2018 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 590 694 7.7E-11 T 14-10-2018 IPR000014 PAS domain ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 SUPERFAMILY SSF55785 594 688 4.54E-10 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 SUPERFAMILY SSF53850 26 245 2.17E-17 T 14-10-2018 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Pfam PF09084 NMT1/THI5 like 32 232 1.1E-36 T 14-10-2018 IPR015168 SsuA/THI5-like ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 Gene3D G3DSA:1.10.287.130 714 796 1.0E-9 T 14-10-2018 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 946 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 909 927 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 878 892 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1571 efbc4864832ec341ed29df8d016d7fd7 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 896 906 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0972 325011527d83215053a4f4dc06b39553 524 Gene3D G3DSA:3.40.190.10 122 216 2.0E-62 T 14-10-2018 ABED_0972 325011527d83215053a4f4dc06b39553 524 SMART SM00062 36 253 3.0E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABED_0972 325011527d83215053a4f4dc06b39553 524 Gene3D G3DSA:3.30.565.10 386 522 4.0E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0972 325011527d83215053a4f4dc06b39553 524 SUPERFAMILY SSF53850 37 258 4.26E-43 T 14-10-2018 ABED_0972 325011527d83215053a4f4dc06b39553 524 Gene3D G3DSA:1.10.287.130 300 384 6.9E-7 T 14-10-2018 ABED_0972 325011527d83215053a4f4dc06b39553 524 SUPERFAMILY SSF55874 388 519 2.84E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0972 325011527d83215053a4f4dc06b39553 524 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 250 4.8E-37 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABED_0972 325011527d83215053a4f4dc06b39553 524 Gene3D G3DSA:3.40.190.10 29 251 2.0E-62 T 14-10-2018 ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 SUPERFAMILY SSF55073 394 551 5.02E-45 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 Pfam PF00563 EAL domain 565 797 1.9E-70 T 14-10-2018 IPR001633 EAL domain ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 384 2.9E-21 T 14-10-2018 IPR000014 PAS domain ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 SUPERFAMILY SSF141868 564 799 1.96E-78 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 Pfam PF13426 PAS domain 275 377 7.9E-14 T 14-10-2018 IPR000014 PAS domain ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 Pfam PF00990 Diguanylate cyclase, GGDEF domain 389 545 2.4E-42 T 14-10-2018 IPR000160 GGDEF domain ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 SMART SM00052 559 802 1.7E-94 T 14-10-2018 IPR001633 EAL domain ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 SUPERFAMILY SSF55785 273 375 1.26E-23 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 Gene3D G3DSA:3.30.450.20 254 387 4.9E-28 T 14-10-2018 ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 Gene3D G3DSA:3.20.20.450 563 803 3.2E-85 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 386 548 1.8E-39 T 14-10-2018 IPR000160 GGDEF domain ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 SMART SM00267 378 549 1.4E-50 T 14-10-2018 IPR000160 GGDEF domain ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 Gene3D G3DSA:3.30.70.270 388 562 4.8E-55 T 14-10-2018 ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 SMART SM00091 265 331 2.4E-7 T 14-10-2018 IPR000014 PAS domain ABED_0839 0a034e39954f3db2b3653709e1c7460e 803 SMART SM00086 337 378 0.0023 T 14-10-2018 IPR001610 PAC motif ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 SMART SM00382 226 367 2.3E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 230 363 2.7E-44 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 21 645 34.424 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 Gene3D G3DSA:3.40.50.300 184 364 1.6E-68 T 14-10-2018 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 Pfam PF01434 Peptidase family M41 427 632 1.0E-69 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 SUPERFAMILY SSF52540 189 459 4.64E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 139 633 2.2E-211 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 Pfam PF06480 FtsH Extracellular 28 130 9.8E-8 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 ProSitePatterns PS00674 AAA-protein family signature. 335 353 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 Gene3D G3DSA:1.20.58.760 441 642 4.2E-64 T 14-10-2018 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 SUPERFAMILY SSF140990 447 638 4.19E-60 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ABED_0427 1c6cd647e5a038090a25dfa0970931ec 661 Gene3D G3DSA:1.10.8.60 366 440 4.8E-26 T 14-10-2018 ABED_0530 7f19c14e3b0377e3234216a497c9beff 274 PIRSF PIRSF012524 3 274 1.3E-62 T 14-10-2018 IPR014464 Conserved virulence factor B ABED_0530 7f19c14e3b0377e3234216a497c9beff 274 SUPERFAMILY SSF50249 142 209 3.74E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0530 7f19c14e3b0377e3234216a497c9beff 274 Gene3D G3DSA:2.40.50.140 147 214 3.5E-8 T 14-10-2018 ABED_0530 7f19c14e3b0377e3234216a497c9beff 274 Gene3D G3DSA:1.10.10.10 215 273 1.8E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0530 7f19c14e3b0377e3234216a497c9beff 274 Pfam PF13509 S1 domain 7 66 3.3E-22 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain ABED_0530 7f19c14e3b0377e3234216a497c9beff 274 SMART SM00316 72 134 5.9 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_0530 7f19c14e3b0377e3234216a497c9beff 274 SMART SM00316 145 207 0.055 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_0312 9540185355311addb5c56801d6c0bf07 391 SUPERFAMILY SSF103473 6 388 3.14E-36 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_0312 9540185355311addb5c56801d6c0bf07 391 Gene3D G3DSA:1.20.1250.20 5 191 2.9E-11 T 14-10-2018 ABED_0312 9540185355311addb5c56801d6c0bf07 391 Pfam PF07690 Major Facilitator Superfamily 11 298 2.1E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_0312 9540185355311addb5c56801d6c0bf07 391 Gene3D G3DSA:1.20.1250.20 210 389 2.5E-17 T 14-10-2018 ABED_1285 d285f24f7972495fb0b8be05c6a3f774 785 Gene3D G3DSA:2.40.170.20 248 785 3.6E-151 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1285 d285f24f7972495fb0b8be05c6a3f774 785 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 141 785 1.5E-91 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_1285 d285f24f7972495fb0b8be05c6a3f774 785 Pfam PF07715 TonB-dependent Receptor Plug Domain 139 235 8.1E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1285 d285f24f7972495fb0b8be05c6a3f774 785 Pfam PF00593 TonB dependent receptor 355 784 5.8E-43 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_1285 d285f24f7972495fb0b8be05c6a3f774 785 SUPERFAMILY SSF56935 101 785 6.02E-113 T 14-10-2018 ABED_1285 d285f24f7972495fb0b8be05c6a3f774 785 Gene3D G3DSA:2.170.130.10 116 245 1.5E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 74 3.0E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 ProSitePatterns PS00057 Ribosomal protein S18 signature. 22 45 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 9.0E-14 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 9.0E-14 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 9.0E-14 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 9.0E-14 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 Gene3D G3DSA:4.10.640.10 1 77 5.1E-25 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 SUPERFAMILY SSF46911 4 75 3.79E-24 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 74 18.927 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 Pfam PF01084 Ribosomal protein S18 19 68 1.6E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0225 f76685a3a419e06ac4c87eb021886aa6 88 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 73 1.9E-31 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1063 8d018d34dcec139043a5a22b4fd6793e 229 SUPERFAMILY SSF46894 142 227 3.12E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_1063 8d018d34dcec139043a5a22b4fd6793e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 227 6.7E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1063 8d018d34dcec139043a5a22b4fd6793e 229 Pfam PF00072 Response regulator receiver domain 10 119 3.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1063 8d018d34dcec139043a5a22b4fd6793e 229 SMART SM00862 156 227 1.6E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1063 8d018d34dcec139043a5a22b4fd6793e 229 SUPERFAMILY SSF52172 6 125 5.27E-31 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1063 8d018d34dcec139043a5a22b4fd6793e 229 SMART SM00448 8 119 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1063 8d018d34dcec139043a5a22b4fd6793e 229 Gene3D G3DSA:1.10.10.10 139 228 9.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1063 8d018d34dcec139043a5a22b4fd6793e 229 Gene3D G3DSA:3.40.50.2300 4 126 1.2E-30 T 14-10-2018 ABED_0793 9e428151b488d13c465d193221036185 226 Gene3D G3DSA:3.20.20.10 1 226 4.4E-67 T 14-10-2018 IPR029066 PLP-binding barrel ABED_0793 9e428151b488d13c465d193221036185 226 PIRSF PIRSF004848 1 226 3.5E-67 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABED_0793 9e428151b488d13c465d193221036185 226 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 6 226 1.2E-64 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABED_0793 9e428151b488d13c465d193221036185 226 SUPERFAMILY SSF51419 5 224 5.79E-61 T 14-10-2018 IPR029066 PLP-binding barrel ABED_0793 9e428151b488d13c465d193221036185 226 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABED_0793 9e428151b488d13c465d193221036185 226 Pfam PF01168 Alanine racemase, N-terminal domain 44 225 3.5E-17 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0793 9e428151b488d13c465d193221036185 226 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 8 226 26.319 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABED_1060 b8ffbaadbc5947f1099c07070dec57bb 104 SUPERFAMILY SSF47413 2 68 4.83E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABED_1060 b8ffbaadbc5947f1099c07070dec57bb 104 SMART SM00530 5 60 2.7E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_1060 b8ffbaadbc5947f1099c07070dec57bb 104 Pfam PF01381 Helix-turn-helix 6 60 5.1E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_1060 b8ffbaadbc5947f1099c07070dec57bb 104 Gene3D G3DSA:1.10.260.40 1 102 1.5E-19 T 14-10-2018 ABED_1076 842168bdc8913c25c17c5a1ab13da155 204 Gene3D G3DSA:3.90.870.10 1 204 1.3E-76 T 14-10-2018 ABED_1076 842168bdc8913c25c17c5a1ab13da155 204 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 203 36.885 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1076 842168bdc8913c25c17c5a1ab13da155 204 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 5.8E-74 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1076 842168bdc8913c25c17c5a1ab13da155 204 SUPERFAMILY SSF55821 4 202 2.29E-74 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABED_1076 842168bdc8913c25c17c5a1ab13da155 204 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 2.0E-70 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 SUPERFAMILY SSF54713 57 222 2.88E-20 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 SUPERFAMILY SSF46934 5 54 2.78E-17 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 Pfam PF00889 Elongation factor TS 73 232 6.3E-44 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 Pfam PF00889 Elongation factor TS 235 329 2.8E-21 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 Gene3D G3DSA:3.30.479.20 57 149 4.1E-21 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 Gene3D G3DSA:1.10.8.10 1 56 1.9E-25 T 14-10-2018 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 347 6.0E-95 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 SUPERFAMILY SSF54713 235 347 2.88E-26 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABED_0515 019fc435027e220d920ff3418e9b9f8c 348 Hamap MF_00050 Elongation factor Ts [tsf]. 1 346 59.411 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 Gene3D G3DSA:3.30.450.20 45 200 2.7E-51 T 14-10-2018 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 SUPERFAMILY SSF58104 263 641 8.37E-53 T 14-10-2018 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 627 4.2E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 SMART SM00283 393 640 4.2E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 Pfam PF17200 Single Cache domain 2 52 202 3.0E-42 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 Gene3D G3DSA:1.20.1480.50 201 295 2.3E-9 T 14-10-2018 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 549 1.7E-38 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 1.7E-38 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 518 1.7E-38 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 568 597 1.7E-38 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 Gene3D G3DSA:1.10.287.950 351 641 6.9E-52 T 14-10-2018 ABED_1793 50826f434df436fea6eca0eb640f11bd 800 SMART SM01049 46 140 1.7E-33 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_0503 fa5cf0369fc1dd34c59d4d2bd70b522b 120 Gene3D G3DSA:3.10.129.10 1 120 3.4E-33 T 14-10-2018 ABED_0503 fa5cf0369fc1dd34c59d4d2bd70b522b 120 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 4 21 - T 14-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 ABED_0503 fa5cf0369fc1dd34c59d4d2bd70b522b 120 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 3 112 6.5E-28 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ABED_0503 fa5cf0369fc1dd34c59d4d2bd70b522b 120 PIRSF PIRSF003230 1 120 7.0E-37 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ABED_0503 fa5cf0369fc1dd34c59d4d2bd70b522b 120 Pfam PF03061 Thioesterase superfamily 13 92 5.5E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABED_0503 fa5cf0369fc1dd34c59d4d2bd70b522b 120 SUPERFAMILY SSF54637 2 120 4.27E-32 T 14-10-2018 IPR029069 HotDog domain superfamily ABED_1410 a73cbdce27538096ebcdf44f42745187 74 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 30 6.6E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABED_0988 df3ce9c5e96778fa436742a273fdfe5a 159 Pfam PF04542 Sigma-70 region 2 3 65 1.4E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABED_0988 df3ce9c5e96778fa436742a273fdfe5a 159 Pfam PF08281 Sigma-70, region 4 97 147 8.0E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_0988 df3ce9c5e96778fa436742a273fdfe5a 159 SUPERFAMILY SSF88946 2 77 4.32E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABED_0988 df3ce9c5e96778fa436742a273fdfe5a 159 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 152 2.2E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABED_0988 df3ce9c5e96778fa436742a273fdfe5a 159 SUPERFAMILY SSF88659 80 154 1.74E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_0988 df3ce9c5e96778fa436742a273fdfe5a 159 Gene3D G3DSA:1.10.10.10 71 155 5.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0988 df3ce9c5e96778fa436742a273fdfe5a 159 Gene3D G3DSA:1.10.1740.10 1 66 6.0E-8 T 14-10-2018 ABED_0884 e730918eb176b8bf8cd3323cbed4f9bd 241 Pfam PF10670 Domain of unknown function (DUF4198) 15 217 1.2E-43 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 Pfam PF00330 Aconitase family (aconitate hydratase) 461 813 2.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 SUPERFAMILY SSF52016 166 363 2.88E-60 T 14-10-2018 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 ProSitePatterns PS00450 Aconitase family signature 1. 698 715 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 Pfam PF11791 Aconitate B N-terminal domain 6 159 2.7E-58 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 ProSitePatterns PS01244 Aconitase family signature 2. 756 769 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 Gene3D G3DSA:1.25.40.310 3 164 2.0E-57 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 3 847 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 Gene3D G3DSA:3.20.19.10 165 352 3.0E-65 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 Gene3D G3DSA:3.30.499.10 393 520 1.1E-144 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 PIRSF PIRSF036687 1 854 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 Gene3D G3DSA:3.40.1060.10 376 672 1.1E-144 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 Gene3D G3DSA:3.30.499.10 674 855 3.0E-55 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 Pfam PF06434 Aconitate hydratase 2 N-terminus 171 373 3.6E-95 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 SUPERFAMILY SSF53732 369 845 8.76E-137 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABED_1343 a1af915c93e33152d76b3c152f3ab4bc 858 SUPERFAMILY SSF74778 3 163 6.02E-59 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ABED_1750 96da7322ce145f02ce1e6d80bc507a6b 666 SUPERFAMILY SSF48452 165 644 2.2E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1750 96da7322ce145f02ce1e6d80bc507a6b 666 Gene3D G3DSA:1.25.40.10 240 425 1.2E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1750 96da7322ce145f02ce1e6d80bc507a6b 666 Pfam PF13181 Tetratricopeptide repeat 621 651 2.5E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_1750 96da7322ce145f02ce1e6d80bc507a6b 666 Gene3D G3DSA:1.25.40.10 584 665 1.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1331 6dcc003621d9b7605956fae38a19abb3 576 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 41 66 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 ABED_1331 6dcc003621d9b7605956fae38a19abb3 576 SUPERFAMILY SSF56762 4 554 2.09E-165 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1331 6dcc003621d9b7605956fae38a19abb3 576 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 545 554 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 ABED_1331 6dcc003621d9b7605956fae38a19abb3 576 Pfam PF00374 Nickel-dependent hydrogenase 41 554 2.6E-208 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 ABED_1331 6dcc003621d9b7605956fae38a19abb3 576 Gene3D G3DSA:1.10.645.10 2 554 7.3E-211 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 182 198 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 57 119 6.6E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 308 371 2.5E-9 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 Gene3D G3DSA:3.30.413.10 122 302 3.7E-99 T 14-10-2018 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 SUPERFAMILY SSF55124 263 396 2.62E-17 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 430 446 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 129 284 4.9E-36 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 SUPERFAMILY SSF56014 130 287 1.83E-42 T 14-10-2018 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 Gene3D G3DSA:3.90.480.20 8 370 3.7E-99 T 14-10-2018 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 SUPERFAMILY SSF55124 41 136 3.11E-20 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 PRINTS PR00397 Sirohaem Fe-binding site signature 385 403 6.6E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 6.6E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 Gene3D G3DSA:3.30.413.10 383 520 1.1E-35 T 14-10-2018 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 SUPERFAMILY SSF56014 386 517 1.7E-30 T 14-10-2018 ABED_1820 d3af072f0d5a0472d32337512ca5c9ca 528 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 388 516 1.8E-15 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Gene3D G3DSA:3.30.70.380 683 774 2.7E-18 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 SUPERFAMILY SSF54991 678 774 7.45E-21 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Gene3D G3DSA:3.30.56.10 6 183 8.7E-67 T 14-10-2018 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Pfam PF03147 Ferredoxin-fold anticodon binding domain 682 774 2.1E-21 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 768 32.735 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 SMART SM00874 388 457 1.1E-19 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Gene3D G3DSA:3.30.930.10 479 672 1.4E-36 T 14-10-2018 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 774 4.0E-181 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 SMART SM00896 682 774 4.8E-26 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Pfam PF01588 Putative tRNA binding domain 45 139 1.2E-23 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 SUPERFAMILY SSF55681 453 670 1.49E-27 T 14-10-2018 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 SUPERFAMILY SSF50249 43 191 1.97E-42 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Pfam PF03484 tRNA synthetase B5 domain 391 456 8.3E-16 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Gene3D G3DSA:3.30.56.10 387 460 1.5E-16 T 14-10-2018 ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 SUPERFAMILY SSF46955 389 460 2.01E-14 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily ABED_1859 a40a071eb469449f5dbf57c5c94d28dd 774 Gene3D G3DSA:2.40.50.140 40 156 8.7E-67 T 14-10-2018 ABED_0143 d54a93991d9365d3e9ea286ccda04c54 291 Pfam PF01715 IPP transferase 37 268 3.7E-48 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABED_0143 d54a93991d9365d3e9ea286ccda04c54 291 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 270 2.7E-63 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABED_0143 d54a93991d9365d3e9ea286ccda04c54 291 SUPERFAMILY SSF52540 4 112 4.99E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0143 d54a93991d9365d3e9ea286ccda04c54 291 Gene3D G3DSA:1.10.20.140 110 173 3.0E-61 T 14-10-2018 ABED_0143 d54a93991d9365d3e9ea286ccda04c54 291 Gene3D G3DSA:3.40.50.300 7 268 3.0E-61 T 14-10-2018 ABED_0143 d54a93991d9365d3e9ea286ccda04c54 291 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 3 279 20.056 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABED_0412 f7567df9cbdb32da7a1e9e91101be0ff 174 SUPERFAMILY SSF101874 25 172 1.06E-21 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0412 f7567df9cbdb32da7a1e9e91101be0ff 174 Pfam PF04264 YceI-like domain 35 170 2.7E-13 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_0412 f7567df9cbdb32da7a1e9e91101be0ff 174 Gene3D G3DSA:2.40.128.110 19 174 3.6E-23 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0412 f7567df9cbdb32da7a1e9e91101be0ff 174 SMART SM00867 19 173 5.8E-9 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 Gene3D G3DSA:1.10.10.10 1 89 1.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 SUPERFAMILY SSF53850 86 288 5.43E-27 T 14-10-2018 ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.0E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 Pfam PF03466 LysR substrate binding domain 86 288 1.3E-27 T 14-10-2018 IPR005119 LysR, substrate-binding ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 Gene3D G3DSA:3.40.190.290 90 288 6.9E-26 T 14-10-2018 ABED_1001 b804e6861d715bb1f269eeb1cfe8b740 289 SUPERFAMILY SSF46785 1 70 1.6E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 Hamap MF_01151 Protein GrpE [grpE]. 2 185 20.332 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 Gene3D G3DSA:2.30.22.10 131 185 8.7E-21 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 SUPERFAMILY SSF58014 30 129 1.14E-24 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 SUPERFAMILY SSF51064 137 184 8.11E-15 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 ProSitePatterns PS01071 grpE protein signature. 140 183 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 Gene3D G3DSA:3.90.20.20 8 128 4.9E-25 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 Pfam PF01025 GrpE 21 184 3.9E-49 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 PRINTS PR00773 GrpE protein signature 52 68 2.1E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 PRINTS PR00773 GrpE protein signature 164 183 2.1E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 PRINTS PR00773 GrpE protein signature 80 95 2.1E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABED_1991 e2e21530b73ab2208e32d4da8380f6c3 185 PRINTS PR00773 GrpE protein signature 137 152 2.1E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 Pfam PF01556 DnaJ C terminal domain 120 331 4.0E-38 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 SUPERFAMILY SSF49493 257 342 6.41E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 Gene3D G3DSA:2.10.230.10 147 206 9.6E-35 T 14-10-2018 ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 SUPERFAMILY SSF46565 3 102 5.23E-33 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 Gene3D G3DSA:2.60.260.20 119 247 9.6E-35 T 14-10-2018 ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 Gene3D G3DSA:1.10.287.110 2 112 9.9E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 PRINTS PR00625 DnaJ domain signature 25 40 1.9E-28 T 14-10-2018 IPR001623 DnaJ domain ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 PRINTS PR00625 DnaJ domain signature 42 62 1.9E-28 T 14-10-2018 IPR001623 DnaJ domain ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 PRINTS PR00625 DnaJ domain signature 62 81 1.9E-28 T 14-10-2018 IPR001623 DnaJ domain ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 PRINTS PR00625 DnaJ domain signature 7 25 1.9E-28 T 14-10-2018 IPR001623 DnaJ domain ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 Gene3D G3DSA:2.60.260.20 252 358 6.7E-25 T 14-10-2018 ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 Pfam PF00684 DnaJ central domain 147 206 1.5E-12 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 36.018 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 SUPERFAMILY SSF57938 134 208 1.96E-17 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 Pfam PF00226 DnaJ domain 5 67 1.5E-27 T 14-10-2018 IPR001623 DnaJ domain ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 SUPERFAMILY SSF49493 119 252 7.59E-15 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 SMART SM00271 4 62 3.3E-32 T 14-10-2018 IPR001623 DnaJ domain ABED_1208 c3d76b9b49b2fd011dd7d29b14d449f9 372 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.7E-127 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 Pfam PF01595 Domain of unknown function DUF21 2 181 4.2E-42 T 14-10-2018 IPR002550 CNNM, transmembrane domain ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 Pfam PF03471 Transporter associated domain 333 409 4.2E-17 T 14-10-2018 IPR005170 Transporter-associated domain ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 Gene3D G3DSA:3.10.580.10 178 326 1.5E-49 T 14-10-2018 ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 Pfam PF00571 CBS domain 199 253 0.0052 T 14-10-2018 IPR000644 CBS domain ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 Pfam PF00571 CBS domain 268 316 2.6E-8 T 14-10-2018 IPR000644 CBS domain ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 SMART SM01091 332 411 2.7E-19 T 14-10-2018 IPR005170 Transporter-associated domain ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 SMART SM00116 207 256 39.0 T 14-10-2018 IPR000644 CBS domain ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 SMART SM00116 269 317 0.034 T 14-10-2018 IPR000644 CBS domain ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 SUPERFAMILY SSF56176 330 417 7.09E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 Gene3D G3DSA:3.30.465.10 327 419 5.9E-18 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABED_1089 b72f5312a7e9d66b86c1818047b1f886 421 SUPERFAMILY SSF54631 193 335 3.41E-30 T 14-10-2018 ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 SUPERFAMILY SSF51569 3 294 2.93E-53 T 14-10-2018 ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 SUPERFAMILY SSF89000 308 465 3.3E-38 T 14-10-2018 ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 Pfam PF02436 Conserved carboxylase domain 307 501 2.5E-39 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 566 583 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 Gene3D G3DSA:3.20.20.70 1 465 3.4E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 Gene3D G3DSA:2.40.50.100 538 609 7.7E-25 T 14-10-2018 ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 SUPERFAMILY SSF51230 536 609 1.7E-21 T 14-10-2018 IPR011053 Single hybrid motif ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 Pfam PF00364 Biotin-requiring enzyme 549 609 2.0E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment ABED_0160 7c8429dad231297787aebdabd0b40e7c 610 Pfam PF00682 HMGL-like 6 278 1.9E-14 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 SUPERFAMILY SSF51569 3 294 2.93E-53 T 14-10-2018 ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 SUPERFAMILY SSF89000 308 465 3.3E-38 T 14-10-2018 ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 Pfam PF02436 Conserved carboxylase domain 307 501 2.5E-39 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 566 583 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 Gene3D G3DSA:3.20.20.70 1 465 3.4E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 Gene3D G3DSA:2.40.50.100 538 609 7.7E-25 T 14-10-2018 ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 SUPERFAMILY SSF51230 536 609 1.7E-21 T 14-10-2018 IPR011053 Single hybrid motif ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 Pfam PF00364 Biotin-requiring enzyme 549 609 2.0E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment ABED_1147 7c8429dad231297787aebdabd0b40e7c 610 Pfam PF00682 HMGL-like 6 278 1.9E-14 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 260 326 4.0E-13 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 PIRSF PIRSF000375 12 326 3.2E-109 T 14-10-2018 IPR016217 Nitrogen fixation, NifU ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 Pfam PF01106 NifU-like domain 254 323 5.0E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 Gene3D G3DSA:3.30.300.130 249 324 1.0E-16 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 Gene3D G3DSA:3.90.1010.10 14 158 5.9E-40 T 14-10-2018 ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 SUPERFAMILY SSF82649 14 154 4.19E-33 T 14-10-2018 ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 200 8.7E-10 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 SUPERFAMILY SSF117916 244 325 2.4E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABED_0569 987fce4818b1b3a08d0fd3e372af408a 326 Pfam PF01592 NifU-like N terminal domain 14 148 1.2E-44 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 ABED_0081 2084febf914f4026612fd330960a965c 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 2.1E-20 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 SUPERFAMILY SSF53738 259 367 1.22E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 366 1.5E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 7.0E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 7.0E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 7.0E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 437 1.7E-159 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 Gene3D G3DSA:3.40.120.10 1 147 3.0E-47 T 14-10-2018 ABED_0081 2084febf914f4026612fd330960a965c 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 134 3.4E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 SUPERFAMILY SSF53738 157 258 1.33E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 SUPERFAMILY SSF55957 360 443 1.44E-12 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 443 42.307 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 Gene3D G3DSA:3.40.120.10 258 341 2.0E-68 T 14-10-2018 ABED_0081 2084febf914f4026612fd330960a965c 444 Gene3D G3DSA:3.30.310.50 372 444 1.3E-9 T 14-10-2018 ABED_0081 2084febf914f4026612fd330960a965c 444 SUPERFAMILY SSF53738 2 182 5.1E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0081 2084febf914f4026612fd330960a965c 444 Gene3D G3DSA:3.40.120.10 175 364 2.0E-68 T 14-10-2018 ABED_0081 2084febf914f4026612fd330960a965c 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 432 4.8E-6 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 SMART SM00316 629 701 2.4E-18 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 SMART SM00732 316 414 8.7E-28 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Gene3D G3DSA:1.10.10.650 1 109 9.8E-30 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Pfam PF12836 Helix-hairpin-helix motif 481 545 1.6E-24 T 14-10-2018 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 SUPERFAMILY SSF158832 3 311 1.7E-82 T 14-10-2018 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Gene3D G3DSA:1.10.150.310 489 610 1.0E-36 T 14-10-2018 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Gene3D G3DSA:2.40.50.140 611 702 2.2E-22 T 14-10-2018 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 SUPERFAMILY SSF47781 551 612 2.67E-10 T 14-10-2018 IPR010994 RuvA domain 2-like ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Pfam PF00575 S1 RNA binding domain 628 701 7.2E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Gene3D G3DSA:1.10.3500.10 113 488 1.5E-128 T 14-10-2018 IPR023323 Tex-like domain superfamily ABED_1824 21f7eee4fd2bab689311a9241878826a 702 SUPERFAMILY SSF50249 618 701 3.51E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Gene3D G3DSA:3.30.420.140 315 441 1.5E-128 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Pfam PF09371 Tex-like protein N-terminal domain 10 192 1.6E-50 T 14-10-2018 IPR018974 Tex-like protein, N-terminal ABED_1824 21f7eee4fd2bab689311a9241878826a 702 Pfam PF16921 Tex protein YqgF-like domain 316 440 5.9E-52 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain ABED_1824 21f7eee4fd2bab689311a9241878826a 702 SUPERFAMILY SSF47781 460 548 1.78E-24 T 14-10-2018 IPR010994 RuvA domain 2-like ABED_1824 21f7eee4fd2bab689311a9241878826a 702 SUPERFAMILY SSF53098 315 459 2.66E-44 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_1958 cb6bafab83758bf7e9f1291a576e00bb 776 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 759 776 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site ABED_1958 cb6bafab83758bf7e9f1291a576e00bb 776 Gene3D G3DSA:2.40.170.20 247 776 6.9E-86 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1958 cb6bafab83758bf7e9f1291a576e00bb 776 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 145 776 3.9E-79 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_1958 cb6bafab83758bf7e9f1291a576e00bb 776 SMART SM00965 47 97 1.7E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABED_1958 cb6bafab83758bf7e9f1291a576e00bb 776 SUPERFAMILY SSF56935 102 776 1.07E-95 T 14-10-2018 ABED_1958 cb6bafab83758bf7e9f1291a576e00bb 776 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 237 2.5E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1958 cb6bafab83758bf7e9f1291a576e00bb 776 Gene3D G3DSA:3.55.50.30 22 115 2.4E-9 T 14-10-2018 ABED_1958 cb6bafab83758bf7e9f1291a576e00bb 776 Gene3D G3DSA:2.170.130.10 116 246 1.0E-18 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_1987 3a269b8a707d3881681db08be0f44778 267 Pfam PF02666 Phosphatidylserine decarboxylase 51 265 4.1E-60 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ABED_1987 3a269b8a707d3881681db08be0f44778 267 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 46 265 7.7E-68 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ABED_1083 334b40cf5a4d26e76f44f206e733939b 148 SUPERFAMILY SSF55136 2 147 2.2E-15 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABED_1083 334b40cf5a4d26e76f44f206e733939b 148 Pfam PF14526 Integron-associated effector binding protein 3 147 9.5E-21 T 14-10-2018 IPR029441 Integron-associated effector binding protein ABED_1083 334b40cf5a4d26e76f44f206e733939b 148 SMART SM00871 1 148 2.4E-25 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding ABED_1083 334b40cf5a4d26e76f44f206e733939b 148 Gene3D G3DSA:3.20.80.10 1 147 3.4E-42 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABED_0758 186e404b0dd45db22abe1fb816280a29 356 SUPERFAMILY SSF141868 114 347 1.57E-65 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0758 186e404b0dd45db22abe1fb816280a29 356 Gene3D G3DSA:3.20.20.450 111 339 1.8E-61 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0758 186e404b0dd45db22abe1fb816280a29 356 Pfam PF00563 EAL domain 114 346 3.3E-54 T 14-10-2018 IPR001633 EAL domain ABED_0758 186e404b0dd45db22abe1fb816280a29 356 SMART SM00052 108 351 8.1E-36 T 14-10-2018 IPR001633 EAL domain ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Gene3D G3DSA:3.30.70.2570 481 554 5.2E-28 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 SMART SM00838 399 484 5.0E-4 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 SUPERFAMILY SSF50447 165 289 3.14E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 SUPERFAMILY SSF54980 292 371 5.4E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Gene3D G3DSA:3.40.50.300 1 185 9.2E-68 T 14-10-2018 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 PRINTS PR00315 GTP-binding elongation factor signature 50 58 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.9E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Gene3D G3DSA:3.30.70.3380 369 478 5.5E-42 T 14-10-2018 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 1.5E-46 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 SUPERFAMILY SSF52540 2 205 5.1E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 SUPERFAMILY SSF54980 400 494 1.34E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 6.4E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Gene3D G3DSA:2.40.30.10 186 286 4.1E-27 T 14-10-2018 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 5.7E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Hamap MF_00071 Elongation factor 4 [lepA]. 1 595 278.02 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Gene3D G3DSA:3.30.70.870 287 368 4.7E-35 T 14-10-2018 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Pfam PF00679 Elongation factor G C-terminus 400 482 1.9E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 1.3E-284 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 ABED_0454 e4dfbdd24858e095e22efff5e052e22a 595 Pfam PF03144 Elongation factor Tu domain 2 205 276 3.6E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABED_1263 02a2ac68e2d9e4c99c820cb09895ff52 744 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 284 717 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1263 02a2ac68e2d9e4c99c820cb09895ff52 744 Gene3D G3DSA:1.20.210.10 224 744 2.8E-141 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1263 02a2ac68e2d9e4c99c820cb09895ff52 744 SUPERFAMILY SSF81442 275 743 9.94E-73 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 Pfam PF13426 PAS domain 51 150 1.2E-14 T 14-10-2018 IPR000014 PAS domain ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 39 158 4.2E-18 T 14-10-2018 IPR000014 PAS domain ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 Gene3D G3DSA:3.30.70.270 169 325 9.3E-15 T 14-10-2018 ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 SMART SM00086 109 151 4.1E-7 T 14-10-2018 IPR001610 PAC motif ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 Gene3D G3DSA:3.30.450.20 25 168 2.9E-29 T 14-10-2018 ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 SMART SM00267 151 310 2.5E-5 T 14-10-2018 IPR000160 GGDEF domain ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 SUPERFAMILY SSF55785 50 146 6.63E-25 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 SMART SM00052 322 560 4.8E-46 T 14-10-2018 IPR001633 EAL domain ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 SUPERFAMILY SSF55073 167 302 2.12E-15 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 281 4.4E-12 T 14-10-2018 IPR000160 GGDEF domain ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 SUPERFAMILY SSF141868 330 557 2.48E-64 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 280 3.9E-10 T 14-10-2018 IPR000160 GGDEF domain ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 Gene3D G3DSA:3.20.20.450 326 563 8.1E-65 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1431 4f8dfaffa3a869d60cc54096fb04ea07 572 Pfam PF00563 EAL domain 330 555 3.0E-58 T 14-10-2018 IPR001633 EAL domain ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 375 391 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 492 4.4E-201 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 SUPERFAMILY SSF50249 4 146 8.78E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 Gene3D G3DSA:2.40.50.140 1 148 9.8E-38 T 14-10-2018 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 Gene3D G3DSA:3.30.930.10 149 503 7.9E-122 T 14-10-2018 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 Pfam PF00152 tRNA synthetases class II (D, K and N) 153 490 7.1E-76 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 SUPERFAMILY SSF55681 153 491 2.11E-111 T 14-10-2018 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 Pfam PF01336 OB-fold nucleic acid binding domain 58 137 5.0E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ABED_0611 5d5be9d5465dca71df1947a0de8f55f7 504 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 9 494 42.386 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABED_1842 981100c4fd0fb3192a68dc7c625c6691 329 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 2 329 2.7E-101 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABED_1842 981100c4fd0fb3192a68dc7c625c6691 329 Gene3D G3DSA:3.40.50.10800 194 278 1.0E-92 T 14-10-2018 ABED_1842 981100c4fd0fb3192a68dc7c625c6691 329 SUPERFAMILY SSF142754 2 328 2.35E-95 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABED_1842 981100c4fd0fb3192a68dc7c625c6691 329 Gene3D G3DSA:3.40.50.10800 84 328 1.0E-92 T 14-10-2018 ABED_1842 981100c4fd0fb3192a68dc7c625c6691 329 Pfam PF02445 Quinolinate synthetase A protein 5 328 1.8E-99 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABED_1842 981100c4fd0fb3192a68dc7c625c6691 329 Gene3D G3DSA:3.40.50.10800 5 310 1.0E-92 T 14-10-2018 ABED_0476 c8e996cffdfb0a97c9cc1db35192de58 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 56 468 5.6E-58 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABED_0476 c8e996cffdfb0a97c9cc1db35192de58 549 Pfam PF00474 Sodium:solute symporter family 56 468 2.1E-107 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABED_0476 c8e996cffdfb0a97c9cc1db35192de58 549 Gene3D G3DSA:1.20.1730.10 43 545 4.0E-61 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily ABED_0980 aeb89641052bba29a8ea06186c52d56e 88 SMART SM00271 7 62 0.0033 T 14-10-2018 IPR001623 DnaJ domain ABED_0980 aeb89641052bba29a8ea06186c52d56e 88 SUPERFAMILY SSF46565 11 64 9.94E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_0980 aeb89641052bba29a8ea06186c52d56e 88 Pfam PF00226 DnaJ domain 12 57 2.1E-9 T 14-10-2018 IPR001623 DnaJ domain ABED_0980 aeb89641052bba29a8ea06186c52d56e 88 Gene3D G3DSA:1.10.287.110 3 88 2.8E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_1284 4046decd9151501fbb2115df182b7aca 369 Gene3D G3DSA:3.40.50.1820 16 354 7.2E-119 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_1284 4046decd9151501fbb2115df182b7aca 369 PIRSF PIRSF000443 2 369 6.6E-123 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ABED_1284 4046decd9151501fbb2115df182b7aca 369 Pfam PF00561 alpha/beta hydrolase fold 41 353 3.9E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABED_1284 4046decd9151501fbb2115df182b7aca 369 Gene3D G3DSA:1.10.1740.110 176 283 7.2E-119 T 14-10-2018 ABED_1284 4046decd9151501fbb2115df182b7aca 369 SUPERFAMILY SSF53474 8 367 3.59E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_1284 4046decd9151501fbb2115df182b7aca 369 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 11 365 1.3E-113 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ABED_1284 4046decd9151501fbb2115df182b7aca 369 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 4 366 27.461 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 Pfam PF10415 Fumarase C C-terminus 409 461 2.4E-23 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 462 1.8E-226 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 1.2E-33 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0670 ef064629461193eb7d12aef121d9fd70 465 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.2E-33 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0670 ef064629461193eb7d12aef121d9fd70 465 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 1.2E-33 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0670 ef064629461193eb7d12aef121d9fd70 465 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.2E-33 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0670 ef064629461193eb7d12aef121d9fd70 465 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 3.6E-6 T 14-10-2018 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 3.6E-6 T 14-10-2018 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 3.6E-6 T 14-10-2018 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 Gene3D G3DSA:1.20.200.10 138 407 8.0E-112 T 14-10-2018 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 Gene3D G3DSA:1.10.275.10 4 137 1.0E-55 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal ABED_0670 ef064629461193eb7d12aef121d9fd70 465 SUPERFAMILY SSF48557 3 463 2.51E-147 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 Gene3D G3DSA:1.10.40.30 409 464 6.2E-27 T 14-10-2018 ABED_0670 ef064629461193eb7d12aef121d9fd70 465 Pfam PF00206 Lyase 11 343 2.5E-110 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal ABED_0670 ef064629461193eb7d12aef121d9fd70 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 463 86.187 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABED_0364 c6d4c68aed4b5ff5c23bd39e90f8503c 296 SUPERFAMILY SSF82861 42 127 8.89E-18 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ABED_0364 c6d4c68aed4b5ff5c23bd39e90f8503c 296 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 158 192 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 ABED_0364 c6d4c68aed4b5ff5c23bd39e90f8503c 296 Gene3D G3DSA:3.30.70.100 195 287 5.9E-26 T 14-10-2018 ABED_0364 c6d4c68aed4b5ff5c23bd39e90f8503c 296 SUPERFAMILY SSF50182 128 193 1.08E-16 T 14-10-2018 IPR010920 LSM domain superfamily ABED_0364 c6d4c68aed4b5ff5c23bd39e90f8503c 296 SUPERFAMILY SSF82689 196 294 6.54E-28 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ABED_0364 c6d4c68aed4b5ff5c23bd39e90f8503c 296 Gene3D G3DSA:2.30.30.60 144 192 1.2E-18 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABED_0364 c6d4c68aed4b5ff5c23bd39e90f8503c 296 Pfam PF00924 Mechanosensitive ion channel 86 283 8.6E-51 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABED_1960 b710cce95ae996af21efdfbda634f1ac 159 Gene3D G3DSA:1.10.10.10 77 153 1.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1960 b710cce95ae996af21efdfbda634f1ac 159 Gene3D G3DSA:1.10.1740.10 1 65 3.2E-10 T 14-10-2018 ABED_1960 b710cce95ae996af21efdfbda634f1ac 159 SUPERFAMILY SSF88659 98 150 6.17E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_1960 b710cce95ae996af21efdfbda634f1ac 159 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 150 1.6E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABED_1960 b710cce95ae996af21efdfbda634f1ac 159 Pfam PF04542 Sigma-70 region 2 3 64 1.4E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1960 b710cce95ae996af21efdfbda634f1ac 159 SUPERFAMILY SSF88946 2 74 9.42E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1960 b710cce95ae996af21efdfbda634f1ac 159 Pfam PF08281 Sigma-70, region 4 95 146 4.1E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_1739 abf8750dec05f45aa5ed5451d5b85ba3 970 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 652 825 1.8E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1739 abf8750dec05f45aa5ed5451d5b85ba3 970 Pfam PF08376 Nitrate and nitrite sensing 55 256 5.3E-15 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein ABED_1739 abf8750dec05f45aa5ed5451d5b85ba3 970 Gene3D G3DSA:1.10.287.950 536 840 1.8E-53 T 14-10-2018 ABED_1739 abf8750dec05f45aa5ed5451d5b85ba3 970 SUPERFAMILY SSF58104 464 839 2.49E-49 T 14-10-2018 ABED_1739 abf8750dec05f45aa5ed5451d5b85ba3 970 SMART SM00283 584 838 8.6E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 Pfam PF07696 7TMR-DISM extracellular 2 33 160 1.2E-18 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 SUPERFAMILY SSF47384 400 472 4.12E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 SMART SM00387 513 625 9.1E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 Pfam PF07695 7TM diverse intracellular signalling 173 378 2.2E-26 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 Gene3D G3DSA:3.30.565.10 469 623 1.2E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 Gene3D G3DSA:2.60.40.2380 28 167 1.2E-11 T 14-10-2018 ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 603 2.9E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 569 2.9E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 SUPERFAMILY SSF55874 464 623 2.62E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 Gene3D G3DSA:1.10.287.130 388 468 4.0E-6 T 14-10-2018 ABED_0982 57ee828b279b1b8f82f085452adb86f2 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 521 622 3.7E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 SUPERFAMILY SSF46548 500 630 6.8E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Gene3D G3DSA:3.30.465.40 4 194 9.7E-25 T 14-10-2018 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Gene3D G3DSA:3.30.70.3270 527 647 3.4E-9 T 14-10-2018 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Gene3D G3DSA:3.30.70.2740 400 483 1.5E-7 T 14-10-2018 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Pfam PF02913 FAD linked oxidases, C-terminal domain 270 522 2.3E-51 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 SUPERFAMILY SSF56176 7 265 4.58E-47 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Pfam PF13183 4Fe-4S dicluster domain 545 618 5.8E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Gene3D G3DSA:1.10.45.10 484 524 6.3E-6 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 548 559 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 604 615 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 SUPERFAMILY SSF55103 243 527 3.43E-53 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Pfam PF01565 FAD binding domain 43 178 2.9E-24 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Pfam PF02754 Cysteine-rich domain 843 920 0.0017 T 14-10-2018 IPR004017 Cysteine-rich domain ABED_0032 33a1c8014a13e9e91c51c25a769680e1 945 Pfam PF02754 Cysteine-rich domain 714 805 0.0037 T 14-10-2018 IPR004017 Cysteine-rich domain ABED_2055 03d7dbf6b401fb53f29f9e20aab4d28a 232 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 5 225 2.3E-103 T 14-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 ABED_2055 03d7dbf6b401fb53f29f9e20aab4d28a 232 SUPERFAMILY SSF53448 3 226 3.05E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_2055 03d7dbf6b401fb53f29f9e20aab4d28a 232 Gene3D G3DSA:3.90.550.10 2 226 2.1E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_2055 03d7dbf6b401fb53f29f9e20aab4d28a 232 Pfam PF02348 Cytidylyltransferase 5 154 1.3E-37 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 Pfam PF16326 ABC transporter C-terminal domain 575 642 3.6E-15 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 Gene3D G3DSA:1.10.287.380 566 646 9.1E-13 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 SUPERFAMILY SSF52540 4 234 5.33E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 Gene3D G3DSA:3.40.50.300 1 282 1.1E-67 T 14-10-2018 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 Pfam PF12848 ABC transporter 227 278 2.8E-7 T 14-10-2018 IPR032781 ABC-transporter extension domain ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 Pfam PF00005 ABC transporter 349 483 3.1E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 Pfam PF00005 ABC transporter 19 188 4.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 SUPERFAMILY SSF52540 329 538 3.48E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 Gene3D G3DSA:3.40.50.300 298 565 6.5E-51 T 14-10-2018 ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 SMART SM00382 357 527 2.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0858 c98754dce933b56f06eab53a4a7796fb 649 SMART SM00382 28 233 5.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 Hamap MF_01498 DNA repair protein RadA [radA]. 22 447 41.148 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 SMART SM00382 89 243 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 426 1.2E-7 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 SUPERFAMILY SSF52540 67 284 5.73E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 PRINTS PR01874 DNA repair protein radA signature 320 343 1.7E-90 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 PRINTS PR01874 DNA repair protein radA signature 81 109 1.7E-90 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 PRINTS PR01874 DNA repair protein radA signature 123 140 1.7E-90 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 PRINTS PR01874 DNA repair protein radA signature 173 197 1.7E-90 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 PRINTS PR01874 DNA repair protein radA signature 247 273 1.7E-90 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 PRINTS PR01874 DNA repair protein radA signature 11 35 1.7E-90 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 PRINTS PR01874 DNA repair protein radA signature 212 240 1.7E-90 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 Gene3D G3DSA:3.40.50.300 59 274 2.1E-40 T 14-10-2018 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 SUPERFAMILY SSF54211 254 447 1.1E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 Gene3D G3DSA:3.30.230.10 295 449 2.5E-16 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 445 3.2E-187 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ABED_0836 e323f7c4c5568cefe4809f3d84f47991 449 Pfam PF13481 AAA domain 82 221 4.2E-13 T 14-10-2018 ABED_0296 3f324d696788d916536bd8808cda8922 544 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 76 129 5.0E-10 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0296 3f324d696788d916536bd8808cda8922 544 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 154 544 41.42 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0296 3f324d696788d916536bd8808cda8922 544 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 274 544 1.9E-101 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0296 3f324d696788d916536bd8808cda8922 544 SUPERFAMILY SSF143243 7 174 3.66E-41 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0296 3f324d696788d916536bd8808cda8922 544 Gene3D G3DSA:3.30.460.80 2 109 1.3E-26 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0296 3f324d696788d916536bd8808cda8922 544 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 8 129 7.4E-32 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0296 3f324d696788d916536bd8808cda8922 544 Gene3D G3DSA:1.10.645.20 161 544 2.5E-143 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0296 3f324d696788d916536bd8808cda8922 544 Hamap MF_01397 NADH-quinone oxidoreductase subunit C/D [nuoC]. 2 544 50.464 T 14-10-2018 IPR026662 NADH-quinone oxidoreductase subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 ABED_0296 3f324d696788d916536bd8808cda8922 544 SUPERFAMILY SSF56762 170 544 2.88E-111 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1898 19a6cbd88676660e33a6b64233939931 851 SUPERFAMILY SSF50447 445 544 4.94E-15 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_1898 19a6cbd88676660e33a6b64233939931 851 Gene3D G3DSA:3.30.54.20 614 667 1.6E-47 T 14-10-2018 ABED_1898 19a6cbd88676660e33a6b64233939931 851 SUPERFAMILY SSF55186 547 697 3.14E-46 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ABED_1898 19a6cbd88676660e33a6b64233939931 851 Pfam PF01411 tRNA synthetases class II (A) 2 544 6.9E-205 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 643 686 3.2E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABED_1898 19a6cbd88676660e33a6b64233939931 851 Gene3D G3DSA:3.30.980.10 547 685 1.6E-47 T 14-10-2018 ABED_1898 19a6cbd88676660e33a6b64233939931 851 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 305 4.0E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 PRINTS PR00980 Alanyl-tRNA synthetase signature 268 284 4.0E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 4.0E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 PRINTS PR00980 Alanyl-tRNA synthetase signature 193 204 4.0E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 PRINTS PR00980 Alanyl-tRNA synthetase signature 220 233 4.0E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 Pfam PF02272 DHHA1 domain 721 844 4.3E-22 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABED_1898 19a6cbd88676660e33a6b64233939931 851 SUPERFAMILY SSF101353 240 452 9.55E-58 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 SMART SM00863 643 686 3.7E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABED_1898 19a6cbd88676660e33a6b64233939931 851 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 830 2.4E-290 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 SUPERFAMILY SSF55681 2 239 1.57E-98 T 14-10-2018 ABED_1898 19a6cbd88676660e33a6b64233939931 851 Gene3D G3DSA:3.10.310.40 745 849 5.8E-26 T 14-10-2018 ABED_1898 19a6cbd88676660e33a6b64233939931 851 Gene3D G3DSA:3.30.930.10 1 235 8.5E-103 T 14-10-2018 ABED_1898 19a6cbd88676660e33a6b64233939931 851 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 851 164.062 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 ABED_1898 19a6cbd88676660e33a6b64233939931 851 Gene3D G3DSA:2.40.30.130 452 544 2.3E-9 T 14-10-2018 ABED_1549 a5d61948f07de5e8a212fe8aca459515 458 SUPERFAMILY SSF56349 214 439 2.12E-12 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABED_1549 a5d61948f07de5e8a212fe8aca459515 458 Gene3D G3DSA:1.10.443.10 218 446 1.2E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABED_1549 a5d61948f07de5e8a212fe8aca459515 458 Gene3D G3DSA:1.10.150.130 64 162 5.3E-6 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal ABED_2101 435b48c1ef141e57eae5bc4469688681 137 SUPERFAMILY SSF49764 18 132 1.24E-38 T 14-10-2018 IPR008978 HSP20-like chaperone ABED_2101 435b48c1ef141e57eae5bc4469688681 137 Pfam PF00011 Hsp20/alpha crystallin family 38 136 2.4E-25 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain ABED_2101 435b48c1ef141e57eae5bc4469688681 137 Gene3D G3DSA:2.60.40.790 3 137 6.1E-38 T 14-10-2018 IPR008978 HSP20-like chaperone ABED_0765 28d8d7ee1544f5d4fcd0f15fe5f63d13 162 SUPERFAMILY SSF51197 3 162 1.02E-32 T 14-10-2018 ABED_0765 28d8d7ee1544f5d4fcd0f15fe5f63d13 162 Pfam PF04074 Domain of unknown function (DUF386) 3 160 1.2E-34 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family ABED_0765 28d8d7ee1544f5d4fcd0f15fe5f63d13 162 Gene3D G3DSA:2.60.120.370 3 162 3.7E-30 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily ABED_0765 28d8d7ee1544f5d4fcd0f15fe5f63d13 162 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 57 162 4.6E-21 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 Pfam PF02321 Outer membrane efflux protein 249 432 1.1E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 Pfam PF02321 Outer membrane efflux protein 30 225 1.9E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 SUPERFAMILY SSF103647 456 531 2.22E-11 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 Gene3D G3DSA:3.30.1330.60 719 854 1.4E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 Pfam PF02412 Thrombospondin type 3 repeat 710 729 0.0026 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 Pfam PF02412 Thrombospondin type 3 repeat 495 518 6.9E-4 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 SUPERFAMILY SSF56954 4 434 4.19E-74 T 14-10-2018 ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 SUPERFAMILY SSF103088 736 851 9.42E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 Gene3D G3DSA:1.20.1600.10 28 449 1.7E-70 T 14-10-2018 ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 SUPERFAMILY SSF103647 710 740 1.83E-7 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 Pfam PF00691 OmpA family 748 845 2.1E-18 T 14-10-2018 IPR006665 OmpA-like domain ABED_1064 fb1b9f4d47bfbb1ac238547a85654fc5 854 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 26 435 9.1E-72 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 ABED_0979 4d6911b714b454c0e5c04f3f8855f5b8 160 SUPERFAMILY SSF46565 109 157 4.06E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_0979 4d6911b714b454c0e5c04f3f8855f5b8 160 SMART SM00271 105 160 7.1E-6 T 14-10-2018 IPR001623 DnaJ domain ABED_0979 4d6911b714b454c0e5c04f3f8855f5b8 160 Pfam PF00226 DnaJ domain 112 157 1.1E-8 T 14-10-2018 IPR001623 DnaJ domain ABED_0979 4d6911b714b454c0e5c04f3f8855f5b8 160 Gene3D G3DSA:1.10.287.110 94 159 1.7E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_0979 4d6911b714b454c0e5c04f3f8855f5b8 160 PRINTS PR00625 DnaJ domain signature 126 141 7.0E-6 T 14-10-2018 IPR001623 DnaJ domain ABED_0979 4d6911b714b454c0e5c04f3f8855f5b8 160 PRINTS PR00625 DnaJ domain signature 108 126 7.0E-6 T 14-10-2018 IPR001623 DnaJ domain ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 Gene3D G3DSA:3.30.160.40 221 306 1.7E-21 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 SUPERFAMILY SSF53850 2 215 2.02E-74 T 14-10-2018 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 SUPERFAMILY SSF54782 219 305 7.45E-22 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.7E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.7E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.7E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.7E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 1.7E-44 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 297 37.218 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 PIRSF PIRSF001438 1 310 4.8E-108 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 297 2.3E-99 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 292 1.9E-16 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 Gene3D G3DSA:3.40.190.10 5 208 2.4E-74 T 14-10-2018 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 209 5.6E-70 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_0266 36bc1ff62b97a82d153ed85efb3c7de0 312 Gene3D G3DSA:3.40.190.10 101 202 2.4E-74 T 14-10-2018 ABED_0608 27fb15c3c1bba9fe5c024dd2aea70c7d 471 Gene3D G3DSA:3.60.120.10 2 471 2.7E-137 T 14-10-2018 IPR005801 ADC synthase GO:0009058 ABED_0608 27fb15c3c1bba9fe5c024dd2aea70c7d 471 Pfam PF04715 Anthranilate synthase component I, N terminal region 11 164 1.9E-19 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_0608 27fb15c3c1bba9fe5c024dd2aea70c7d 471 PRINTS PR00095 Anthranilate synthase component I signature 307 320 2.3E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_0608 27fb15c3c1bba9fe5c024dd2aea70c7d 471 PRINTS PR00095 Anthranilate synthase component I signature 401 415 2.3E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_0608 27fb15c3c1bba9fe5c024dd2aea70c7d 471 PRINTS PR00095 Anthranilate synthase component I signature 321 334 2.3E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_0608 27fb15c3c1bba9fe5c024dd2aea70c7d 471 PRINTS PR00095 Anthranilate synthase component I signature 416 430 2.3E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_0608 27fb15c3c1bba9fe5c024dd2aea70c7d 471 Pfam PF00425 chorismate binding enzyme 206 459 1.1E-85 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABED_0608 27fb15c3c1bba9fe5c024dd2aea70c7d 471 SUPERFAMILY SSF56322 4 467 8.37E-125 T 14-10-2018 IPR005801 ADC synthase GO:0009058 ABED_0334 1f44cf40ef681db91c3c4b3ebee98ca1 330 PIRSF PIRSF006470 1 330 1.4E-120 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 ABED_0334 1f44cf40ef681db91c3c4b3ebee98ca1 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 27 315 1.1E-100 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 ABED_0334 1f44cf40ef681db91c3c4b3ebee98ca1 330 Gene3D G3DSA:3.40.190.170 21 329 3.0E-112 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily ABED_0334 1f44cf40ef681db91c3c4b3ebee98ca1 330 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 28 283 5.2E-100 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 Gene3D G3DSA:3.90.55.10 94 627 4.6E-226 T 14-10-2018 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 Gene3D G3DSA:2.40.40.20 661 823 6.3E-52 T 14-10-2018 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 SUPERFAMILY SSF50692 681 826 2.03E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 725 752 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 Gene3D G3DSA:3.40.50.740 98 576 4.6E-226 T 14-10-2018 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 54 826 0.0 T 14-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 Pfam PF00384 Molybdopterin oxidoreductase 98 567 2.5E-91 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 SUPERFAMILY SSF53706 55 677 1.44E-168 T 14-10-2018 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 Gene3D G3DSA:3.40.228.10 191 653 4.6E-226 T 14-10-2018 ABED_1085 e7e1651451a34dec5b4452637b8dfc6a 827 Pfam PF01568 Molydopterin dinucleotide binding domain 686 805 1.9E-26 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 SMART SM01209 98 290 3.6E-123 T 14-10-2018 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 Gene3D G3DSA:3.30.470.20 186 324 2.4E-51 T 14-10-2018 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 Gene3D G3DSA:3.40.50.20 1 90 6.9E-24 T 14-10-2018 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 SUPERFAMILY SSF52440 2 98 4.46E-26 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 SMART SM01210 324 419 1.5E-33 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 SUPERFAMILY SSF51246 323 419 2.35E-22 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 Gene3D G3DSA:3.90.600.10 325 420 4.2E-23 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 419 1.4E-142 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 416 4.4E-20 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 419 37.567 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 97 9.2E-25 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 98 290 1.6E-77 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 284 291 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 Gene3D G3DSA:3.30.1490.20 117 185 4.3E-24 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABED_1108 a1be93bf7024fd01a63866bd6f966669 420 SUPERFAMILY SSF56059 99 314 6.72E-60 T 14-10-2018 ABED_2062 6a32f56c6002d0a8038aaf3b045525fc 206 SUPERFAMILY SSF53335 3 188 8.51E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_2062 6a32f56c6002d0a8038aaf3b045525fc 206 Pfam PF13847 Methyltransferase domain 34 152 3.6E-8 T 14-10-2018 IPR025714 Methyltransferase domain ABED_2062 6a32f56c6002d0a8038aaf3b045525fc 206 Gene3D G3DSA:3.40.50.150 26 203 4.0E-18 T 14-10-2018 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 Gene3D G3DSA:3.30.470.130 1 448 1.6E-188 T 14-10-2018 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 4 446 7.4E-201 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 SUPERFAMILY SSF51246 332 444 6.8E-46 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 Pfam PF02785 Biotin carboxylase C-terminal domain 337 442 2.7E-41 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 SUPERFAMILY SSF52440 3 115 3.02E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 2.1E-40 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 323 5.9E-78 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 SUPERFAMILY SSF56059 85 348 3.01E-65 T 14-10-2018 ABED_0041 a21d042057f58d8e3b989eb9ff1bc158 450 SMART SM00878 337 442 1.1E-64 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_2043 12e3dda8dd507f34d77225a8ad40d0f9 289 SUPERFAMILY SSF53850 5 266 4.51E-74 T 14-10-2018 ABED_2043 12e3dda8dd507f34d77225a8ad40d0f9 289 Gene3D G3DSA:3.40.190.10 82 176 8.7E-64 T 14-10-2018 ABED_2043 12e3dda8dd507f34d77225a8ad40d0f9 289 Pfam PF02621 Menaquinone biosynthesis 5 263 3.6E-75 T 14-10-2018 IPR003773 Menaquinone biosynthesis enzyme ABED_2043 12e3dda8dd507f34d77225a8ad40d0f9 289 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 4 269 35.022 T 14-10-2018 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 ABED_2043 12e3dda8dd507f34d77225a8ad40d0f9 289 Gene3D G3DSA:3.40.190.10 7 261 8.7E-64 T 14-10-2018 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 197 20.201 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 210 460 15.123 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 Gene3D G3DSA:3.40.1190.20 206 461 1.9E-70 T 14-10-2018 IPR029056 Ribokinase-like ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 7 197 2.9E-45 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 Pfam PF01256 Carbohydrate kinase 235 459 4.6E-47 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 208 460 9.6E-53 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 404 414 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 Pfam PF03853 YjeF-related protein N-terminus 24 175 3.0E-35 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 Gene3D G3DSA:3.40.50.10260 1 203 7.3E-52 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 SUPERFAMILY SSF64153 7 231 2.35E-48 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 SUPERFAMILY SSF53613 210 459 1.07E-47 T 14-10-2018 IPR029056 Ribokinase-like ABED_0157 bd022e8095ec362887e8a363d6e6dc6a 461 PIRSF PIRSF017184 3 461 2.1E-109 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 TIGRFAM TIGR00191 thrB: homoserine kinase 1 292 5.2E-88 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 Pfam PF00288 GHMP kinases N terminal domain 77 137 1.3E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 Pfam PF08544 GHMP kinases C terminal 208 275 1.1E-5 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 PRINTS PR00958 Homoserine kinase signature 8 23 7.7E-31 T 14-10-2018 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 PRINTS PR00958 Homoserine kinase signature 124 137 7.7E-31 T 14-10-2018 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 PRINTS PR00958 Homoserine kinase signature 242 257 7.7E-31 T 14-10-2018 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 PRINTS PR00958 Homoserine kinase signature 90 105 7.7E-31 T 14-10-2018 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 PRINTS PR00958 Homoserine kinase signature 163 180 7.7E-31 T 14-10-2018 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 SUPERFAMILY SSF55060 159 277 6.24E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 Hamap MF_00384 Homoserine kinase [thrB]. 3 292 27.607 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 PIRSF PIRSF000676 1 293 1.7E-85 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 Gene3D G3DSA:3.30.230.10 3 155 1.1E-76 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 SUPERFAMILY SSF54211 1 144 2.28E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1848 a5364bbbbb42ad4663adb9151ab43641 293 Gene3D G3DSA:3.30.70.890 156 260 1.1E-76 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABED_1969 bb90fc5759d63e60b1ebc419ccba6493 303 PIRSF PIRSF002936 1 303 6.0E-155 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABED_1969 bb90fc5759d63e60b1ebc419ccba6493 303 Gene3D G3DSA:3.40.50.620 8 213 1.9E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1969 bb90fc5759d63e60b1ebc419ccba6493 303 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 10 303 2.4E-155 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABED_1969 bb90fc5759d63e60b1ebc419ccba6493 303 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 258 6.5E-63 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ABED_1969 bb90fc5759d63e60b1ebc419ccba6493 303 SUPERFAMILY SSF52402 7 211 7.15E-73 T 14-10-2018 ABED_1969 bb90fc5759d63e60b1ebc419ccba6493 303 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 5 303 56.878 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABED_1474 cd7705f05143e281724e4fabab373c27 174 Pfam PF00691 OmpA family 71 166 4.4E-15 T 14-10-2018 IPR006665 OmpA-like domain ABED_1474 cd7705f05143e281724e4fabab373c27 174 PRINTS PR01021 OMPA domain signature 72 94 1.1E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_1474 cd7705f05143e281724e4fabab373c27 174 PRINTS PR01021 OMPA domain signature 103 118 1.1E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_1474 cd7705f05143e281724e4fabab373c27 174 PRINTS PR01021 OMPA domain signature 118 134 1.1E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_1474 cd7705f05143e281724e4fabab373c27 174 Gene3D G3DSA:3.30.1330.60 50 170 3.7E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_1474 cd7705f05143e281724e4fabab373c27 174 SUPERFAMILY SSF103088 64 171 1.96E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0869 2ac7be5c6c730896cdab544754965396 511 SUPERFAMILY SSF52402 182 432 4.19E-54 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 SUPERFAMILY SSF52317 6 225 1.04E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0869 2ac7be5c6c730896cdab544754965396 511 Gene3D G3DSA:3.30.300.10 392 511 8.4E-50 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 511 3.2E-146 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 4.7E-6 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 4.7E-6 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 4.7E-6 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 193 4.6E-74 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABED_0869 2ac7be5c6c730896cdab544754965396 511 Gene3D G3DSA:3.40.50.880 4 197 5.7E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0869 2ac7be5c6c730896cdab544754965396 511 Pfam PF02540 NAD synthase 204 281 3.3E-6 T 14-10-2018 IPR022310 NAD/GMP synthase ABED_0869 2ac7be5c6c730896cdab544754965396 511 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 511 52.949 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 ABED_0869 2ac7be5c6c730896cdab544754965396 511 Gene3D G3DSA:3.40.50.620 198 391 7.8E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 3.4E-7 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 3.4E-7 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 3.4E-7 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00097 Anthranilate synthase component II signature 77 88 1.4E-5 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.4E-5 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 PRINTS PR00097 Anthranilate synthase component II signature 50 59 1.4E-5 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 Pfam PF00117 Glutamine amidotransferase class-I 7 187 1.7E-41 T 14-10-2018 IPR017926 Glutamine amidotransferase ABED_0869 2ac7be5c6c730896cdab544754965396 511 SUPERFAMILY SSF54810 391 511 4.84E-49 T 14-10-2018 ABED_0869 2ac7be5c6c730896cdab544754965396 511 Pfam PF00958 GMP synthase C terminal domain 421 510 2.3E-42 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 Gene3D G3DSA:3.40.50.10420 134 270 1.7E-8 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 Pfam PF11870 Domain of unknown function (DUF3390) 390 454 6.5E-7 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 SUPERFAMILY SSF54862 303 385 1.05E-15 T 14-10-2018 ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 Gene3D G3DSA:3.30.70.3270 283 406 1.2E-7 T 14-10-2018 ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 SUPERFAMILY SSF100950 61 287 3.85E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 Pfam PF13183 4Fe-4S dicluster domain 302 368 1.1E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 Pfam PF02589 LUD domain 69 280 1.5E-44 T 14-10-2018 IPR003741 LUD domain ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 354 365 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0037 a3cc3755d06657425a5babf08fdd84be 459 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 305 316 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 Gene3D G3DSA:1.20.1560.10 161 472 3.8E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 Pfam PF00005 ABC transporter 505 654 1.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 10 714 1.5E-254 T 14-10-2018 IPR017750 ATPase, type I secretion system ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 Gene3D G3DSA:3.90.70.10 6 143 1.6E-36 T 14-10-2018 ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 SMART SM00382 514 700 1.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 SUPERFAMILY SSF90123 161 473 1.15E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 Pfam PF00664 ABC transporter transmembrane region 176 435 3.7E-24 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 SUPERFAMILY SSF52540 479 713 6.32E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1065 bfb4225c684717d3fcd93b15b9429e5a 720 Gene3D G3DSA:3.40.50.300 481 719 2.5E-73 T 14-10-2018 ABED_0466 13dfad5d691e2480d27915a0542c0b81 294 Gene3D G3DSA:3.40.1750.20 147 213 4.9E-62 T 14-10-2018 ABED_0466 13dfad5d691e2480d27915a0542c0b81 294 SUPERFAMILY SSF52096 50 243 5.97E-36 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABED_0466 13dfad5d691e2480d27915a0542c0b81 294 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 54 256 2.1E-69 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 ABED_0466 13dfad5d691e2480d27915a0542c0b81 294 Pfam PF01343 Peptidase family S49 107 257 1.8E-50 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ABED_0466 13dfad5d691e2480d27915a0542c0b81 294 Gene3D G3DSA:3.90.226.10 65 245 4.9E-62 T 14-10-2018 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Gene3D G3DSA:3.20.20.330 1 313 6.0E-88 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 PIRSF PIRSF000381 1 1159 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 SMART SM01018 629 711 1.1E-31 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Gene3D G3DSA:1.10.1240.10 621 708 3.7E-21 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Gene3D G3DSA:1.10.288.10 900 958 1.5E-37 T 14-10-2018 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Pfam PF02310 B12 binding domain 718 810 1.5E-16 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 SUPERFAMILY SSF82282 4 378 6.15E-100 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Gene3D G3DSA:3.20.20.20 325 618 2.0E-93 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 SUPERFAMILY SSF51717 336 603 5.1E-71 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 SUPERFAMILY SSF47644 625 710 3.53E-19 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 936 1159 2.3E-29 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Gene3D G3DSA:3.40.50.280 714 862 1.6E-36 T 14-10-2018 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 SUPERFAMILY SSF52242 713 845 1.31E-34 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Pfam PF02607 B12 binding domain 633 703 3.1E-17 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Pfam PF02574 Homocysteine S-methyltransferase 14 304 1.4E-56 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Pfam PF00809 Pterin binding enzyme 339 572 1.0E-34 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 Gene3D G3DSA:3.10.196.10 896 1159 1.5E-37 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 TIGRFAM TIGR02082 metH: methionine synthase 10 1159 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0109 fbd8f1eb7c5abf3ec0a039bbb3e9a665 1159 SUPERFAMILY SSF56507 877 1159 4.19E-68 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 193 259 1.1E-18 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 190 1.6E-20 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 Gene3D G3DSA:1.10.10.10 2 105 1.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 SUPERFAMILY SSF50331 193 259 6.38E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 SUPERFAMILY SSF50331 122 190 1.98E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 Pfam PF03459 TOBE domain 196 258 1.3E-9 T 14-10-2018 IPR005116 Transport-associated OB, type 1 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 Pfam PF03459 TOBE domain 125 186 2.8E-14 T 14-10-2018 IPR005116 Transport-associated OB, type 1 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.7E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 Gene3D G3DSA:2.40.50.100 122 188 1.8E-23 T 14-10-2018 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 Gene3D G3DSA:2.40.50.100 193 259 3.5E-21 T 14-10-2018 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 PIRSF PIRSF005763 1 260 2.1E-82 T 14-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 19 104 4.0E-31 T 14-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal ABED_0013 63c786b2d2fcc4827999a8bf3f0b30aa 260 SUPERFAMILY SSF46785 5 103 1.22E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0064 1934b9e9c0ec68ec8dc4bb7ca3604f9d 334 SUPERFAMILY SSF111369 55 249 3.79E-11 T 14-10-2018 ABED_0064 1934b9e9c0ec68ec8dc4bb7ca3604f9d 334 Gene3D G3DSA:2.40.50.100 129 173 2.6E-22 T 14-10-2018 ABED_0064 1934b9e9c0ec68ec8dc4bb7ca3604f9d 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 244 6.7E-44 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_0064 1934b9e9c0ec68ec8dc4bb7ca3604f9d 334 Gene3D G3DSA:2.40.30.170 174 247 2.6E-22 T 14-10-2018 ABED_0064 1934b9e9c0ec68ec8dc4bb7ca3604f9d 334 Gene3D G3DSA:2.40.420.20 248 333 1.2E-15 T 14-10-2018 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SUPERFAMILY SSF47781 394 559 1.41E-43 T 14-10-2018 IPR010994 RuvA domain 2-like ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Hamap MF_01588 DNA ligase [ligA]. 3 648 46.515 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SUPERFAMILY SSF52113 572 649 9.6E-21 T 14-10-2018 IPR036420 BRCT domain superfamily ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SMART SM00278 467 486 1.2 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SMART SM00278 529 548 20.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SMART SM00278 433 452 60.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 575 645 2.5E-15 T 14-10-2018 IPR001357 BRCT domain ABED_1018 12c493f62d0261241bf9735a7af492bf 652 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 110 139 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 307 1.3E-104 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 PIRSF PIRSF001604 1 652 9.1E-227 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SUPERFAMILY SSF56091 4 306 2.26E-101 T 14-10-2018 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 644 1.2E-221 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SMART SM00292 575 651 1.9E-15 T 14-10-2018 IPR001357 BRCT domain ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Gene3D G3DSA:2.40.50.140 309 395 1.4E-30 T 14-10-2018 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Gene3D G3DSA:1.10.150.20 492 563 1.4E-9 T 14-10-2018 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Gene3D G3DSA:1.10.287.610 6 66 1.2E-12 T 14-10-2018 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SMART SM00532 1 435 3.3E-211 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 311 388 1.8E-32 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Pfam PF12826 Helix-hairpin-helix motif 497 554 1.1E-7 T 14-10-2018 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Gene3D G3DSA:3.30.470.90 67 308 8.3E-85 T 14-10-2018 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 SUPERFAMILY SSF50249 309 390 2.74E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Gene3D G3DSA:1.10.150.20 419 491 1.1E-24 T 14-10-2018 ABED_1018 12c493f62d0261241bf9735a7af492bf 652 Gene3D G3DSA:3.40.50.10190 572 651 2.0E-26 T 14-10-2018 IPR036420 BRCT domain superfamily ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 SUPERFAMILY SSF55021 265 354 3.97E-17 T 14-10-2018 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 Gene3D G3DSA:3.30.70.260 272 358 4.2E-19 T 14-10-2018 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 Gene3D G3DSA:3.40.190.10 95 266 1.8E-51 T 14-10-2018 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 TIGRFAM TIGR01807 CM_P2: chorismate mutase 7 83 2.5E-24 T 14-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 Pfam PF01817 Chorismate mutase type II 11 90 5.0E-23 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 Gene3D G3DSA:3.40.190.10 175 259 1.8E-51 T 14-10-2018 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 Pfam PF01842 ACT domain 281 341 2.2E-6 T 14-10-2018 IPR002912 ACT domain ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 PIRSF PIRSF001500 1 357 2.4E-116 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 SUPERFAMILY SSF53850 94 279 4.02E-52 T 14-10-2018 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 SMART SM00830 11 93 2.9E-25 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 SUPERFAMILY SSF48600 6 93 5.95E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 Pfam PF00800 Prephenate dehydratase 95 270 1.6E-56 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABED_1932 f05223c3bca66daef5a921f35cd33b5e 359 Gene3D G3DSA:1.20.59.10 4 93 6.8E-23 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 12 378 3.4E-86 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 Gene3D G3DSA:3.40.250.10 399 488 9.6E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_1323 e59664b0cf3134f53203c342e11deef2 488 Pfam PF02926 THUMP domain 37 169 1.8E-12 T 14-10-2018 IPR004114 THUMP domain GO:0003723 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 SUPERFAMILY SSF143437 10 183 1.66E-34 T 14-10-2018 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 SMART SM00981 82 175 1.4E-12 T 14-10-2018 IPR004114 THUMP domain GO:0003723 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 Gene3D G3DSA:3.40.50.620 185 394 2.3E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1323 e59664b0cf3134f53203c342e11deef2 488 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 488 161.257 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 SUPERFAMILY SSF52821 403 486 5.35E-9 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_1323 e59664b0cf3134f53203c342e11deef2 488 SUPERFAMILY SSF52402 184 382 1.9E-42 T 14-10-2018 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 393 488 7.5E-30 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 Gene3D G3DSA:3.30.2130.30 1 184 3.3E-27 T 14-10-2018 ABED_1323 e59664b0cf3134f53203c342e11deef2 488 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 185 375 2.7E-59 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 ABED_1432 c122a49ff7d319d5c79643d3caafff3a 212 PIRSF PIRSF000190 2 212 1.2E-79 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABED_1432 c122a49ff7d319d5c79643d3caafff3a 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 117 1.7E-22 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABED_1432 c122a49ff7d319d5c79643d3caafff3a 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABED_1432 c122a49ff7d319d5c79643d3caafff3a 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 5.5E-20 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABED_1432 c122a49ff7d319d5c79643d3caafff3a 212 Gene3D G3DSA:2.30.110.10 13 212 6.8E-80 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABED_1432 c122a49ff7d319d5c79643d3caafff3a 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 3.6E-88 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABED_1432 c122a49ff7d319d5c79643d3caafff3a 212 SUPERFAMILY SSF50475 11 212 1.63E-64 T 14-10-2018 ABED_1432 c122a49ff7d319d5c79643d3caafff3a 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 212 38.449 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABED_1486 6313b8aca3446383414987259464b85f 284 Gene3D G3DSA:3.90.1530.30 43 105 3.4E-24 T 14-10-2018 ABED_1486 6313b8aca3446383414987259464b85f 284 SMART SM00470 30 120 8.1E-33 T 14-10-2018 IPR003115 ParB/Sulfiredoxin ABED_1486 6313b8aca3446383414987259464b85f 284 SUPERFAMILY SSF110849 24 124 3.92E-26 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ABED_1486 6313b8aca3446383414987259464b85f 284 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 200 1.9E-53 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ABED_1486 6313b8aca3446383414987259464b85f 284 SUPERFAMILY SSF109709 113 222 3.66E-31 T 14-10-2018 ABED_1486 6313b8aca3446383414987259464b85f 284 Gene3D G3DSA:1.10.10.2830 107 220 2.0E-31 T 14-10-2018 ABED_1486 6313b8aca3446383414987259464b85f 284 Pfam PF02195 ParB-like nuclease domain 31 120 1.8E-24 T 14-10-2018 IPR003115 ParB/Sulfiredoxin ABED_1458 d7e85fae8a9bf7ee3993b35ba9154e78 325 Pfam PF04773 FecR protein 117 204 6.8E-18 T 14-10-2018 IPR006860 FecR protein ABED_1458 d7e85fae8a9bf7ee3993b35ba9154e78 325 PIRSF PIRSF018266 2 324 6.0E-51 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ABED_1458 d7e85fae8a9bf7ee3993b35ba9154e78 325 Gene3D G3DSA:2.60.120.1440 102 242 2.1E-22 T 14-10-2018 ABED_1458 d7e85fae8a9bf7ee3993b35ba9154e78 325 Pfam PF16344 Domain of unknown function (DUF4974) 220 319 1.7E-11 T 14-10-2018 IPR032508 Protein FecR, C-terminal ABED_1458 d7e85fae8a9bf7ee3993b35ba9154e78 325 Gene3D G3DSA:3.55.50.30 249 324 1.1E-9 T 14-10-2018 ABED_0404 9e172346852062b3491d098aa9216353 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 10 99 17.296 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABED_0404 9e172346852062b3491d098aa9216353 106 PIRSF PIRSF004555 7 106 7.8E-22 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABED_0404 9e172346852062b3491d098aa9216353 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 11 98 6.3E-22 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABED_0404 9e172346852062b3491d098aa9216353 106 Pfam PF02575 YbaB/EbfC DNA-binding family 16 100 2.6E-19 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABED_0404 9e172346852062b3491d098aa9216353 106 SUPERFAMILY SSF82607 12 99 1.44E-18 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ABED_0404 9e172346852062b3491d098aa9216353 106 Gene3D G3DSA:3.30.1310.10 5 103 2.1E-33 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 SUPERFAMILY SSF52540 7 287 2.55E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Pfam PF14492 Elongation Factor G, domain II 409 482 4.0E-35 T 14-10-2018 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 110.674 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 SUPERFAMILY SSF54211 484 604 2.07E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Pfam PF00679 Elongation factor G C-terminus 609 695 1.0E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Gene3D G3DSA:2.40.30.10 299 410 1.7E-41 T 14-10-2018 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Gene3D G3DSA:3.30.70.240 613 683 1.5E-88 T 14-10-2018 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.0E-64 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 186 3.9E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 PRINTS PR00315 GTP-binding elongation factor signature 100 111 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.3E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Gene3D G3DSA:3.30.230.10 489 696 1.5E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Gene3D G3DSA:3.30.70.870 411 488 3.2E-33 T 14-10-2018 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 SUPERFAMILY SSF54980 409 486 2.55E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 SUPERFAMILY SSF50447 271 409 6.31E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.6E-14 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Gene3D G3DSA:3.40.50.300 1 298 5.8E-111 T 14-10-2018 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 Pfam PF03764 Elongation factor G, domain IV 484 604 1.2E-45 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 SMART SM00889 485 605 1.1E-72 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 SMART SM00838 609 696 5.6E-56 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like ABED_1796 986a9d4c84f48982ad1a0413ef37c04b 702 SUPERFAMILY SSF54980 612 698 3.79E-31 T 14-10-2018 IPR035647 EF-G domain III/V-like ABED_1600 3599325107b47fc4348d31717a748fa1 172 Gene3D G3DSA:1.10.10.10 88 172 7.3E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1600 3599325107b47fc4348d31717a748fa1 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 90 169 1.5E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABED_1600 3599325107b47fc4348d31717a748fa1 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 139 145 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABED_1600 3599325107b47fc4348d31717a748fa1 172 SUPERFAMILY SSF46767 88 169 9.16E-30 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABED_1600 3599325107b47fc4348d31717a748fa1 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 89 168 1.4E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABED_1600 3599325107b47fc4348d31717a748fa1 172 SUPERFAMILY SSF53155 54 93 8.24E-7 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABED_2018 a4cfae2a519dc84a6f9e71fdb985956d 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 86 5.0E-10 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABED_2018 a4cfae2a519dc84a6f9e71fdb985956d 311 Pfam PF00589 Phage integrase family 137 291 1.3E-36 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABED_2018 a4cfae2a519dc84a6f9e71fdb985956d 311 Gene3D G3DSA:1.10.443.10 104 308 8.8E-46 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABED_2018 a4cfae2a519dc84a6f9e71fdb985956d 311 Gene3D G3DSA:1.10.150.130 3 99 3.8E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal ABED_2018 a4cfae2a519dc84a6f9e71fdb985956d 311 SUPERFAMILY SSF56349 4 298 2.33E-49 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABED_2057 f27c38ea82722bed45d854ff874b2235 340 Gene3D G3DSA:3.40.50.11190 4 146 1.6E-6 T 14-10-2018 ABED_2057 f27c38ea82722bed45d854ff874b2235 340 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 169 317 1.5E-5 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ABED_2057 f27c38ea82722bed45d854ff874b2235 340 SUPERFAMILY SSF53756 8 265 3.77E-6 T 14-10-2018 ABED_2057 f27c38ea82722bed45d854ff874b2235 340 SUPERFAMILY SSF53756 177 336 5.1E-8 T 14-10-2018 ABED_2057 f27c38ea82722bed45d854ff874b2235 340 Gene3D G3DSA:3.40.50.2000 148 289 1.3E-31 T 14-10-2018 ABED_0240 a9f9248042b8d872fb1462a484b88572 241 SUPERFAMILY SSF103088 107 229 3.27E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0240 a9f9248042b8d872fb1462a484b88572 241 Pfam PF05433 Glycine zipper 2TM domain 39 82 3.3E-8 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 ABED_0240 a9f9248042b8d872fb1462a484b88572 241 Gene3D G3DSA:3.30.1330.60 98 238 2.8E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0240 a9f9248042b8d872fb1462a484b88572 241 PRINTS PR01021 OMPA domain signature 160 175 1.8E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_0240 a9f9248042b8d872fb1462a484b88572 241 PRINTS PR01021 OMPA domain signature 175 191 1.8E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_0240 a9f9248042b8d872fb1462a484b88572 241 PRINTS PR01021 OMPA domain signature 130 152 1.8E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_0240 a9f9248042b8d872fb1462a484b88572 241 Pfam PF00691 OmpA family 129 223 8.6E-18 T 14-10-2018 IPR006665 OmpA-like domain ABED_0604 8c9cfed0a9f650359fb2424d0446b45e 235 Pfam PF00696 Amino acid kinase family 3 213 6.7E-35 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABED_0604 8c9cfed0a9f650359fb2424d0446b45e 235 SUPERFAMILY SSF53633 2 228 9.56E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABED_0604 8c9cfed0a9f650359fb2424d0446b45e 235 Hamap MF_01220_B Uridylate kinase [pyrH]. 1 235 41.411 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ABED_0604 8c9cfed0a9f650359fb2424d0446b45e 235 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 2 230 2.5E-93 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ABED_0604 8c9cfed0a9f650359fb2424d0446b45e 235 Gene3D G3DSA:3.40.1160.10 1 235 7.4E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABED_0604 8c9cfed0a9f650359fb2424d0446b45e 235 PIRSF PIRSF005650 1 235 1.3E-87 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 ABED_1182 85126af250fc7bc1962673d4cb7cf1a3 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 151 163 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABED_1182 85126af250fc7bc1962673d4cb7cf1a3 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 264 1.7E-66 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABED_1182 85126af250fc7bc1962673d4cb7cf1a3 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 263 2.2E-65 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABED_1182 85126af250fc7bc1962673d4cb7cf1a3 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 269 17.955 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABED_0731 89981698de1cd07252db4292d9f8322e 380 SUPERFAMILY SSF50129 46 204 2.83E-44 T 14-10-2018 IPR011032 GroES-like superfamily ABED_0731 89981698de1cd07252db4292d9f8322e 380 Pfam PF00107 Zinc-binding dehydrogenase 219 339 5.6E-15 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABED_0731 89981698de1cd07252db4292d9f8322e 380 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 100 114 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABED_0731 89981698de1cd07252db4292d9f8322e 380 Gene3D G3DSA:3.40.50.720 193 347 7.0E-116 T 14-10-2018 ABED_0731 89981698de1cd07252db4292d9f8322e 380 Gene3D G3DSA:3.90.180.10 50 375 7.0E-116 T 14-10-2018 ABED_0731 89981698de1cd07252db4292d9f8322e 380 SMART SM00829 52 379 5.5E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABED_0731 89981698de1cd07252db4292d9f8322e 380 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 67 176 3.4E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABED_0731 89981698de1cd07252db4292d9f8322e 380 SUPERFAMILY SSF51735 182 345 4.04E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0579 0d3d66dd37f52f06c2b520c828423805 214 TIGRFAM TIGR01083 nth: endonuclease III 8 196 6.4E-67 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ABED_0579 0d3d66dd37f52f06c2b520c828423805 214 PIRSF PIRSF001435 1 211 9.7E-47 T 14-10-2018 ABED_0579 0d3d66dd37f52f06c2b520c828423805 214 Gene3D G3DSA:1.10.340.30 24 135 6.3E-63 T 14-10-2018 ABED_0579 0d3d66dd37f52f06c2b520c828423805 214 SUPERFAMILY SSF48150 5 207 3.61E-60 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABED_0579 0d3d66dd37f52f06c2b520c828423805 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 166 6.2E-21 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABED_0579 0d3d66dd37f52f06c2b520c828423805 214 Gene3D G3DSA:1.10.1670.10 16 205 6.3E-63 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ABED_0579 0d3d66dd37f52f06c2b520c828423805 214 SMART SM00478 41 187 6.5E-42 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABED_0579 0d3d66dd37f52f06c2b520c828423805 214 Hamap MF_00942 Endonuclease III [nth]. 1 211 31.618 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 Pfam PF13426 PAS domain 24 122 3.1E-13 T 14-10-2018 IPR000014 PAS domain ABED_0557 a22adb82e3e642b6500f7f784a618959 512 Gene3D G3DSA:3.30.450.20 114 237 2.4E-23 T 14-10-2018 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 Gene3D G3DSA:3.30.450.20 3 113 6.0E-24 T 14-10-2018 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 124 1.4E-14 T 14-10-2018 IPR000014 PAS domain ABED_0557 a22adb82e3e642b6500f7f784a618959 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 250 3.1E-16 T 14-10-2018 IPR000014 PAS domain ABED_0557 a22adb82e3e642b6500f7f784a618959 512 Gene3D G3DSA:1.10.287.950 238 512 3.2E-48 T 14-10-2018 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 301 1.7E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 1.7E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 477 1.9E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 SMART SM00283 258 512 9.7E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 SMART SM00091 130 198 0.6 T 14-10-2018 IPR000014 PAS domain ABED_0557 a22adb82e3e642b6500f7f784a618959 512 SMART SM00091 6 76 4.8 T 14-10-2018 IPR000014 PAS domain ABED_0557 a22adb82e3e642b6500f7f784a618959 512 SMART SM00086 81 123 0.061 T 14-10-2018 IPR001610 PAC motif ABED_0557 a22adb82e3e642b6500f7f784a618959 512 SMART SM00086 203 245 0.0017 T 14-10-2018 IPR001610 PAC motif ABED_0557 a22adb82e3e642b6500f7f784a618959 512 SUPERFAMILY SSF58104 244 511 7.32E-52 T 14-10-2018 ABED_0557 a22adb82e3e642b6500f7f784a618959 512 SUPERFAMILY SSF55785 18 120 1.53E-22 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0557 a22adb82e3e642b6500f7f784a618959 512 SUPERFAMILY SSF55785 138 242 7.73E-26 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0557 a22adb82e3e642b6500f7f784a618959 512 Pfam PF08447 PAS fold 153 238 3.1E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_0658 3603cd4b134cd9ba6bee09676d6b698b 234 Gene3D G3DSA:3.40.50.300 5 231 1.6E-65 T 14-10-2018 ABED_0658 3603cd4b134cd9ba6bee09676d6b698b 234 SUPERFAMILY SSF52540 7 227 3.46E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0658 3603cd4b134cd9ba6bee09676d6b698b 234 Pfam PF00005 ABC transporter 27 175 7.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0658 3603cd4b134cd9ba6bee09676d6b698b 234 SMART SM00382 36 224 4.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0658 3603cd4b134cd9ba6bee09676d6b698b 234 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 406 1.3E-147 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 Gene3D G3DSA:3.40.50.620 7 178 1.1E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 411 52.474 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 SUPERFAMILY SSF52402 7 171 1.79E-46 T 14-10-2018 ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 Pfam PF00764 Arginosuccinate synthase 10 403 5.5E-157 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 SUPERFAMILY SSF69864 186 411 6.41E-95 T 14-10-2018 ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 Gene3D G3DSA:3.90.1260.10 188 413 9.7E-100 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_1194 0ed8627c2629c68120b5ab044e3dc347 413 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_1174 24e02bc4eb8bea4ace67fbc2ef2333ea 246 SMART SM00479 3 178 1.5E-16 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_1174 24e02bc4eb8bea4ace67fbc2ef2333ea 246 Gene3D G3DSA:3.30.420.10 2 178 2.9E-31 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_1174 24e02bc4eb8bea4ace67fbc2ef2333ea 246 Pfam PF00929 Exonuclease 5 162 3.5E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_1174 24e02bc4eb8bea4ace67fbc2ef2333ea 246 SUPERFAMILY SSF53098 3 216 1.98E-32 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_0916 2db4d672d05e037163bf23ab367a8166 148 Gene3D G3DSA:3.10.430.100 60 148 3.1E-25 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ABED_0916 2db4d672d05e037163bf23ab367a8166 148 SUPERFAMILY SSF55653 57 146 2.88E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ABED_0916 2db4d672d05e037163bf23ab367a8166 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 1.4E-18 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0916 2db4d672d05e037163bf23ab367a8166 148 SUPERFAMILY SSF55658 1 57 6.63E-16 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ABED_0916 2db4d672d05e037163bf23ab367a8166 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 4.1E-40 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0916 2db4d672d05e037163bf23ab367a8166 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.071 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0916 2db4d672d05e037163bf23ab367a8166 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 5.3E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal ABED_0916 2db4d672d05e037163bf23ab367a8166 148 Gene3D G3DSA:3.40.5.10 1 53 8.2E-21 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0916 2db4d672d05e037163bf23ab367a8166 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0123 157fd08f699758f0cf5984f10279204f 416 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 128 139 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABED_0123 157fd08f699758f0cf5984f10279204f 416 Gene3D G3DSA:1.10.300.10 97 195 1.9E-97 T 14-10-2018 ABED_0123 157fd08f699758f0cf5984f10279204f 416 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABED_0123 157fd08f699758f0cf5984f10279204f 416 SUPERFAMILY SSF52540 1 415 1.7E-158 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0123 157fd08f699758f0cf5984f10279204f 416 Gene3D G3DSA:3.90.170.10 261 414 5.8E-67 T 14-10-2018 ABED_0123 157fd08f699758f0cf5984f10279204f 416 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 414 9.4E-165 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABED_0123 157fd08f699758f0cf5984f10279204f 416 Gene3D G3DSA:3.40.440.10 5 255 1.9E-97 T 14-10-2018 ABED_0123 157fd08f699758f0cf5984f10279204f 416 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 416 177.702 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABED_0123 157fd08f699758f0cf5984f10279204f 416 Pfam PF00709 Adenylosuccinate synthetase 5 413 5.6E-168 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABED_0123 157fd08f699758f0cf5984f10279204f 416 SMART SM00788 3 414 1.4E-249 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABED_0643 07f0502672750035250aeaa40a37d60b 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 193 8.9E-20 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABED_0643 07f0502672750035250aeaa40a37d60b 299 SUPERFAMILY SSF51735 1 295 1.42E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0643 07f0502672750035250aeaa40a37d60b 299 Gene3D G3DSA:3.40.50.720 1 251 7.2E-45 T 14-10-2018 ABED_0297 c7011abc52490383aa1686b5e2346937 171 SUPERFAMILY SSF56770 12 157 5.76E-65 T 14-10-2018 ABED_0297 c7011abc52490383aa1686b5e2346937 171 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 13 154 3.1E-66 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0297 c7011abc52490383aa1686b5e2346937 171 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 3 153 42.544 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0297 c7011abc52490383aa1686b5e2346937 171 Gene3D G3DSA:3.40.50.12280 4 169 6.5E-71 T 14-10-2018 ABED_0297 c7011abc52490383aa1686b5e2346937 171 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 40 147 1.6E-22 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1195 32c0b55b8aaa08abb1925e0281840c1d 478 Gene3D G3DSA:3.40.50.12780 11 376 2.6E-85 T 14-10-2018 ABED_1195 32c0b55b8aaa08abb1925e0281840c1d 478 Gene3D G3DSA:3.30.300.30 380 477 2.7E-19 T 14-10-2018 ABED_1195 32c0b55b8aaa08abb1925e0281840c1d 478 ProSitePatterns PS00455 Putative AMP-binding domain signature. 132 143 - T 14-10-2018 IPR020845 AMP-binding, conserved site ABED_1195 32c0b55b8aaa08abb1925e0281840c1d 478 SUPERFAMILY SSF56801 15 477 2.22E-98 T 14-10-2018 ABED_1195 32c0b55b8aaa08abb1925e0281840c1d 478 Pfam PF00501 AMP-binding enzyme 13 383 1.0E-66 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABED_1396 305042d870a70c5a532eb9f446dc9bdc 181 Gene3D G3DSA:2.20.25.90 51 103 2.7E-12 T 14-10-2018 ABED_1396 305042d870a70c5a532eb9f446dc9bdc 181 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 72 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 ABED_1396 305042d870a70c5a532eb9f446dc9bdc 181 SMART SM00926 50 104 1.3E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1396 305042d870a70c5a532eb9f446dc9bdc 181 Pfam PF00384 Molybdopterin oxidoreductase 107 178 8.1E-11 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1396 305042d870a70c5a532eb9f446dc9bdc 181 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 51 102 1.3E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1396 305042d870a70c5a532eb9f446dc9bdc 181 Gene3D G3DSA:3.40.50.740 116 181 3.5E-20 T 14-10-2018 ABED_1396 305042d870a70c5a532eb9f446dc9bdc 181 SUPERFAMILY SSF53706 49 181 3.66E-49 T 14-10-2018 ABED_0599 d85025b14363682f55f9f4c912819875 486 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 265 479 1.8E-48 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ABED_0599 d85025b14363682f55f9f4c912819875 486 SUPERFAMILY SSF53187 262 482 5.65E-50 T 14-10-2018 ABED_0599 d85025b14363682f55f9f4c912819875 486 Gene3D G3DSA:3.40.630.40 253 486 5.2E-72 T 14-10-2018 ABED_0599 d85025b14363682f55f9f4c912819875 486 SMART SM00646 324 479 3.7E-42 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ABED_1826 a9598da797a44f3329d9cfde4bebc40a 127 SUPERFAMILY SSF55298 1 126 2.36E-45 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABED_1826 a9598da797a44f3329d9cfde4bebc40a 127 Gene3D G3DSA:3.30.1330.40 1 127 5.3E-52 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABED_1826 a9598da797a44f3329d9cfde4bebc40a 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 1.4E-51 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 ABED_1826 a9598da797a44f3329d9cfde4bebc40a 127 Pfam PF01042 Endoribonuclease L-PSP 9 124 3.5E-42 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ABED_2111 a1b67fc68124729dd2d1d19d16d4edde 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 294 2.0E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABED_2111 a1b67fc68124729dd2d1d19d16d4edde 310 SUPERFAMILY SSF53686 3 304 5.89E-103 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABED_2111 a1b67fc68124729dd2d1d19d16d4edde 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ABED_2111 a1b67fc68124729dd2d1d19d16d4edde 310 Gene3D G3DSA:3.40.50.1100 45 146 9.4E-124 T 14-10-2018 ABED_2111 a1b67fc68124729dd2d1d19d16d4edde 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 305 9.2E-137 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABED_2111 a1b67fc68124729dd2d1d19d16d4edde 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 305 1.8E-131 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABED_2111 a1b67fc68124729dd2d1d19d16d4edde 310 Gene3D G3DSA:3.40.50.1100 9 300 9.4E-124 T 14-10-2018 ABED_1966 a1b67fc68124729dd2d1d19d16d4edde 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 294 2.0E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABED_1966 a1b67fc68124729dd2d1d19d16d4edde 310 SUPERFAMILY SSF53686 3 304 5.89E-103 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABED_1966 a1b67fc68124729dd2d1d19d16d4edde 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ABED_1966 a1b67fc68124729dd2d1d19d16d4edde 310 Gene3D G3DSA:3.40.50.1100 45 146 9.4E-124 T 14-10-2018 ABED_1966 a1b67fc68124729dd2d1d19d16d4edde 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 305 9.2E-137 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABED_1966 a1b67fc68124729dd2d1d19d16d4edde 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 305 1.8E-131 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABED_1966 a1b67fc68124729dd2d1d19d16d4edde 310 Gene3D G3DSA:3.40.50.1100 9 300 9.4E-124 T 14-10-2018 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 3 330 44.737 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 SUPERFAMILY SSF51735 4 184 5.97E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 8.6E-134 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 Gene3D G3DSA:1.10.3730.40 184 340 3.5E-71 T 14-10-2018 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 SUPERFAMILY SSF48179 185 334 1.55E-69 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 6.9E-64 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 2.0E-75 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 Gene3D G3DSA:3.40.50.720 1 183 3.5E-77 T 14-10-2018 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 PIRSF PIRSF000116 1 211 2.3E-46 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABED_0219 5065dd1da931fe6a576440e44e3d5858 340 PIRSF PIRSF000116 204 335 3.4E-12 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABED_1075 6dccdfe15d82bf8abd7e9fb157346e93 178 Gene3D G3DSA:3.40.980.10 2 178 4.5E-64 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABED_1075 6dccdfe15d82bf8abd7e9fb157346e93 178 SMART SM00852 9 155 1.9E-25 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_1075 6dccdfe15d82bf8abd7e9fb157346e93 178 SUPERFAMILY SSF53218 6 176 6.67E-46 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABED_1075 6dccdfe15d82bf8abd7e9fb157346e93 178 Pfam PF00994 Probable molybdopterin binding domain 9 153 3.2E-30 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_1075 6dccdfe15d82bf8abd7e9fb157346e93 178 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 7 149 3.4E-38 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_1075 6dccdfe15d82bf8abd7e9fb157346e93 178 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 71 84 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 ABED_1851 a2a08a02b29af1949dff193b508045e1 119 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 113 6.3E-19 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABED_1851 a2a08a02b29af1949dff193b508045e1 119 SUPERFAMILY SSF89919 1 101 3.01E-16 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily ABED_1851 a2a08a02b29af1949dff193b508045e1 119 Gene3D G3DSA:3.30.300.20 1 117 1.0E-18 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta ABED_1851 a2a08a02b29af1949dff193b508045e1 119 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 ABED_1851 a2a08a02b29af1949dff193b508045e1 119 Pfam PF02033 Ribosome-binding factor A 7 108 2.2E-15 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABED_1851 a2a08a02b29af1949dff193b508045e1 119 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 12 95 0.003 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABED_1851 a2a08a02b29af1949dff193b508045e1 119 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 108 18.242 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 Gene3D G3DSA:3.30.450.20 63 217 9.1E-23 T 14-10-2018 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 Gene3D G3DSA:3.30.450.20 218 342 9.2E-40 T 14-10-2018 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 SMART SM00283 524 773 9.9E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 584 737 2.0E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 Gene3D G3DSA:1.10.287.950 474 772 1.9E-55 T 14-10-2018 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 SMART SM01049 201 273 2.0E-19 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 SMART SM01049 76 164 1.1E-11 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 Pfam PF08269 Cache domain 35 326 4.9E-77 T 14-10-2018 IPR004010 Double Cache domain 2 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 651 680 4.6E-38 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 545 574 4.6E-38 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 699 728 4.6E-38 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 622 649 4.6E-38 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1221 b75fd01ff5c41ab7d6f44f38ef35a932 827 SUPERFAMILY SSF58104 397 768 3.14E-50 T 14-10-2018 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SMART SM00086 491 532 52.0 T 14-10-2018 IPR001610 PAC motif ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SMART SM00086 363 404 1.7 T 14-10-2018 IPR001610 PAC motif ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 Gene3D G3DSA:3.30.450.20 294 407 1.7E-15 T 14-10-2018 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 Gene3D G3DSA:1.10.287.130 531 631 1.2E-14 T 14-10-2018 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SUPERFAMILY SSF55785 303 406 4.67E-14 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 Pfam PF13426 PAS domain 303 402 2.4E-8 T 14-10-2018 IPR000014 PAS domain ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 Pfam PF00512 His Kinase A (phospho-acceptor) domain 571 637 4.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SMART SM00091 287 357 0.0053 T 14-10-2018 IPR000014 PAS domain ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SMART SM00091 419 484 4.5E-8 T 14-10-2018 IPR000014 PAS domain ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SUPERFAMILY SSF55874 687 801 3.41E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SMART SM00387 692 803 1.8E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 748 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 764 782 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 752 762 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 Gene3D G3DSA:3.30.565.10 632 802 1.7E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 Pfam PF00989 PAS fold 420 518 4.8E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SMART SM00388 569 641 6.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SUPERFAMILY SSF55785 421 526 1.61E-13 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 SUPERFAMILY SSF47384 565 637 9.42E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 Gene3D G3DSA:3.30.450.20 413 527 9.6E-18 T 14-10-2018 ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 704 801 6.7E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 420 528 3.4E-14 T 14-10-2018 IPR000014 PAS domain ABED_0395 9ee7f8fcf6dcfcd53ced0c871b3cc6c6 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 298 409 4.3E-14 T 14-10-2018 IPR000014 PAS domain ABED_1621 e4a54fc8edb4e5676f66dcc6a801673c 393 SUPERFAMILY SSF56266 14 390 2.09E-115 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABED_1621 e4a54fc8edb4e5676f66dcc6a801673c 393 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 393 5.0E-124 T 14-10-2018 ABED_1621 e4a54fc8edb4e5676f66dcc6a801673c 393 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 393 110.069 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABED_1621 e4a54fc8edb4e5676f66dcc6a801673c 393 Pfam PF01960 ArgJ family 20 393 2.5E-122 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABED_1621 e4a54fc8edb4e5676f66dcc6a801673c 393 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 393 1.6E-112 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABED_1621 e4a54fc8edb4e5676f66dcc6a801673c 393 Gene3D G3DSA:3.60.70.12 11 263 4.6E-78 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABED_1621 e4a54fc8edb4e5676f66dcc6a801673c 393 Gene3D G3DSA:3.10.20.340 264 393 3.0E-37 T 14-10-2018 ABED_1840 5c80af211c76d12964558799360bace9 103 SUPERFAMILY SSF55620 2 98 6.67E-22 T 14-10-2018 ABED_1840 5c80af211c76d12964558799360bace9 103 Pfam PF02152 Dihydroneopterin aldolase 3 93 1.2E-19 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABED_1840 5c80af211c76d12964558799360bace9 103 Gene3D G3DSA:3.30.1130.10 1 101 3.4E-18 T 14-10-2018 ABED_1840 5c80af211c76d12964558799360bace9 103 TIGRFAM TIGR00526 folB_dom: FolB domain 2 93 1.8E-18 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABED_1840 5c80af211c76d12964558799360bace9 103 SMART SM00905 3 103 2.6E-21 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABED_1840 5c80af211c76d12964558799360bace9 103 ProSitePatterns PS00018 EF-hand calcium-binding domain. 36 48 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site ABED_0222 6af4de21c903fdf97036327961686887 326 Pfam PF06144 DNA polymerase III, delta subunit 19 181 4.6E-11 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 ABED_0222 6af4de21c903fdf97036327961686887 326 SUPERFAMILY SSF52540 8 196 5.2E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0222 6af4de21c903fdf97036327961686887 326 Gene3D G3DSA:3.40.50.300 4 124 4.1E-7 T 14-10-2018 ABED_0222 6af4de21c903fdf97036327961686887 326 Gene3D G3DSA:1.20.272.10 214 323 2.3E-6 T 14-10-2018 ABED_2002 948abecdc910528ee2ee4b1e04f4f992 375 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 19 372 9.3E-137 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 ABED_2002 948abecdc910528ee2ee4b1e04f4f992 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 306 335 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site ABED_2002 948abecdc910528ee2ee4b1e04f4f992 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 18 372 1.6E-132 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ABED_2002 948abecdc910528ee2ee4b1e04f4f992 375 Gene3D G3DSA:3.40.50.150 21 369 4.7E-124 T 14-10-2018 ABED_2002 948abecdc910528ee2ee4b1e04f4f992 375 Gene3D G3DSA:3.40.1350.30 53 196 4.7E-124 T 14-10-2018 ABED_2002 948abecdc910528ee2ee4b1e04f4f992 375 SUPERFAMILY SSF53335 2 372 7.52E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_2002 948abecdc910528ee2ee4b1e04f4f992 375 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 12 373 40.216 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 SUPERFAMILY SSF55347 113 238 2.65E-43 T 14-10-2018 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 PIRSF PIRSF006205 1 355 1.8E-120 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 Pfam PF13288 DXP reductoisomerase C-terminal domain 238 351 5.0E-28 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 SUPERFAMILY SSF69055 266 354 1.01E-22 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 352 1.8E-116 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 119 6.4E-36 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 Gene3D G3DSA:3.40.50.720 1 131 7.0E-40 T 14-10-2018 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 Gene3D G3DSA:1.10.1740.10 277 355 6.8E-19 T 14-10-2018 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 355 38.907 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 SUPERFAMILY SSF51735 2 124 1.84E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0152 c508a88ba7ae666ab013d0e340de2e06 355 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 127 207 2.5E-33 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABED_1134 04dc6e086bc3ee95c22c22b5c9a69449 357 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 11 354 2.3E-150 T 14-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 ABED_1134 04dc6e086bc3ee95c22c22b5c9a69449 357 Gene3D G3DSA:3.20.20.70 2 353 1.4E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1134 04dc6e086bc3ee95c22c22b5c9a69449 357 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 10 357 52.262 T 14-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 ABED_1134 04dc6e086bc3ee95c22c22b5c9a69449 357 SUPERFAMILY SSF102114 11 343 1.16E-51 T 14-10-2018 ABED_1134 04dc6e086bc3ee95c22c22b5c9a69449 357 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 48 354 7.5E-129 T 14-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 ABED_1134 04dc6e086bc3ee95c22c22b5c9a69449 357 PIRSF PIRSF004762 3 356 2.9E-104 T 14-10-2018 ABED_1134 04dc6e086bc3ee95c22c22b5c9a69449 357 Pfam PF04055 Radical SAM superfamily 55 225 4.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_1707 7267cfdcbb8362cd49d182de928c0dc8 162 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 138 0.004 T 14-10-2018 ABED_1707 7267cfdcbb8362cd49d182de928c0dc8 162 SUPERFAMILY SSF160369 1 156 3.01E-41 T 14-10-2018 ABED_1707 7267cfdcbb8362cd49d182de928c0dc8 162 Pfam PF00466 Ribosomal protein L10 1 95 1.0E-18 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 ABED_1707 7267cfdcbb8362cd49d182de928c0dc8 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 157 22.872 T 14-10-2018 IPR022973 Ribosomal protein L10 ABED_1707 7267cfdcbb8362cd49d182de928c0dc8 162 Gene3D G3DSA:3.30.70.1730 1 130 5.9E-34 T 14-10-2018 ABED_0416 f51ec2455a3a504b16993d12bf36505d 360 Pfam PF02687 FtsX-like permease family 259 351 5.9E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABED_0416 f51ec2455a3a504b16993d12bf36505d 360 Pfam PF12704 MacB-like periplasmic core domain 16 205 7.8E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain ABED_0426 b6cb61e96bd106d2402aea514594ef69 272 SUPERFAMILY SSF53335 41 266 1.27E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0426 b6cb61e96bd106d2402aea514594ef69 272 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 45 268 1.2E-56 T 14-10-2018 ABED_0426 b6cb61e96bd106d2402aea514594ef69 272 PIRSF PIRSF000401 14 270 8.4E-62 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABED_0426 b6cb61e96bd106d2402aea514594ef69 272 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 268 27.078 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABED_0426 b6cb61e96bd106d2402aea514594ef69 272 Gene3D G3DSA:3.40.50.150 85 272 6.9E-46 T 14-10-2018 ABED_0426 b6cb61e96bd106d2402aea514594ef69 272 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 38 262 5.4E-55 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABED_0246 5fe592523a5c55b5b978b60f6a26819d 185 SUPERFAMILY SSF52499 2 183 1.83E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABED_0246 5fe592523a5c55b5b978b60f6a26819d 185 Pfam PF00857 Isochorismatase family 4 149 7.6E-38 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABED_0246 5fe592523a5c55b5b978b60f6a26819d 185 Gene3D G3DSA:3.40.50.850 1 185 5.7E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 ProSitePatterns PS00788 Chorismate synthase signature 2. 122 138 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 ProSitePatterns PS00789 Chorismate synthase signature 3. 316 332 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 PIRSF PIRSF001456 1 358 5.1E-136 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 Hamap MF_00300 Chorismate synthase [aroC]. 8 349 35.7 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 Pfam PF01264 Chorismate synthase 8 342 3.9E-133 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 TIGRFAM TIGR00033 aroC: chorismate synthase 8 346 1.1E-125 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 SUPERFAMILY SSF103263 2 348 1.57E-137 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1498 302ecfa8f17efade4672471ba84ececa 358 Gene3D G3DSA:3.60.150.10 1 358 1.9E-149 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABED_1101 37b19534edf2a45bc51007acfbb0ff3e 193 Gene3D G3DSA:3.40.50.2300 2 131 2.4E-33 T 14-10-2018 ABED_1101 37b19534edf2a45bc51007acfbb0ff3e 193 Pfam PF00072 Response regulator receiver domain 4 112 2.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1101 37b19534edf2a45bc51007acfbb0ff3e 193 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 187 2.5E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1101 37b19534edf2a45bc51007acfbb0ff3e 193 SUPERFAMILY SSF46894 137 188 8.79E-7 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_1101 37b19534edf2a45bc51007acfbb0ff3e 193 Gene3D G3DSA:1.10.10.10 132 193 4.2E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1101 37b19534edf2a45bc51007acfbb0ff3e 193 SUPERFAMILY SSF52172 3 122 1.71E-34 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1101 37b19534edf2a45bc51007acfbb0ff3e 193 SMART SM00448 2 112 1.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0961 382d2e32ea4c46f0ca380c4757850f4a 119 SUPERFAMILY SSF54197 20 117 1.12E-21 T 14-10-2018 IPR036265 HIT-like superfamily ABED_0961 382d2e32ea4c46f0ca380c4757850f4a 119 Gene3D G3DSA:3.30.428.10 8 119 2.6E-22 T 14-10-2018 IPR036265 HIT-like superfamily ABED_0961 382d2e32ea4c46f0ca380c4757850f4a 119 PIRSF PIRSF000714 1 117 2.0E-35 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type ABED_0961 382d2e32ea4c46f0ca380c4757850f4a 119 Pfam PF01230 HIT domain 23 84 4.0E-5 T 14-10-2018 IPR001310 Histidine triad (HIT) protein ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 351 3.4E-10 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 SUPERFAMILY SSF55979 126 239 1.82E-18 T 14-10-2018 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 Gene3D G3DSA:3.10.150.10 1 119 3.0E-24 T 14-10-2018 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 352 7.7E-77 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.4E-21 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 238 1.9E-18 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 SMART SM00480 17 350 8.4E-54 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 SUPERFAMILY SSF55979 240 352 3.73E-17 T 14-10-2018 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 SUPERFAMILY SSF55979 1 119 5.02E-20 T 14-10-2018 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 Gene3D G3DSA:3.10.150.10 242 354 1.5E-29 T 14-10-2018 ABED_0002 90028a1eaa342a8ca16745d07d913b19 356 Gene3D G3DSA:3.10.150.10 121 241 5.5E-25 T 14-10-2018 ABED_1540 971d75d5c2312c2cd57b04ac04cd46fd 552 Gene3D G3DSA:1.10.486.10 381 440 3.8E-23 T 14-10-2018 ABED_1540 971d75d5c2312c2cd57b04ac04cd46fd 552 Pfam PF13361 UvrD-like helicase C-terminal domain 407 517 5.0E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABED_1540 971d75d5c2312c2cd57b04ac04cd46fd 552 SUPERFAMILY SSF52540 5 535 3.64E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1540 971d75d5c2312c2cd57b04ac04cd46fd 552 Gene3D G3DSA:3.40.50.300 5 124 2.8E-18 T 14-10-2018 ABED_1540 971d75d5c2312c2cd57b04ac04cd46fd 552 Gene3D G3DSA:3.40.50.300 441 535 3.8E-23 T 14-10-2018 ABED_1540 971d75d5c2312c2cd57b04ac04cd46fd 552 Pfam PF13245 AAA domain 14 223 2.7E-20 T 14-10-2018 ABED_1540 971d75d5c2312c2cd57b04ac04cd46fd 552 Gene3D G3DSA:3.40.50.300 142 268 2.0E-20 T 14-10-2018 ABED_0935 59938b705384bafcad1fa0145dd22f77 199 SUPERFAMILY SSF50475 3 167 4.12E-37 T 14-10-2018 ABED_0935 59938b705384bafcad1fa0145dd22f77 199 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 10 161 4.8E-19 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related ABED_0935 59938b705384bafcad1fa0145dd22f77 199 Gene3D G3DSA:2.30.110.10 1 191 5.8E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 283 346 6.0E-15 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 SMART SM01231 282 346 8.3E-14 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 SUPERFAMILY SSF47384 283 347 4.71E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 533 8.9E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Pfam PF01627 Hpt domain 8 97 2.3E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 SUPERFAMILY SSF55874 348 532 1.07E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 SMART SM00387 391 534 6.1E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Gene3D G3DSA:1.10.287.560 282 346 1.2E-11 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 3.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 3.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 3.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 SUPERFAMILY SSF50341 533 667 1.12E-26 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 SUPERFAMILY SSF47226 5 127 9.42E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 SMART SM00073 5 103 3.4E-20 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Gene3D G3DSA:1.20.120.160 1 145 9.3E-25 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 SMART SM00260 526 667 7.9E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Pfam PF01584 CheW-like domain 540 668 9.8E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Gene3D G3DSA:2.30.30.40 534 663 4.6E-35 T 14-10-2018 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Gene3D G3DSA:2.40.50.180 557 622 4.6E-35 T 14-10-2018 ABED_1114 1315683344a70ef08aea3fb8b40eccee 684 Gene3D G3DSA:3.30.565.10 347 533 3.8E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1982 3e0d14afbcfd7474d4959ab43e1450f7 576 SUPERFAMILY SSF52833 463 572 3.46E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1982 3e0d14afbcfd7474d4959ab43e1450f7 576 Gene3D G3DSA:2.60.40.1250 15 150 7.8E-17 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily ABED_1982 3e0d14afbcfd7474d4959ab43e1450f7 576 SUPERFAMILY SSF74863 20 132 7.85E-18 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily ABED_1982 3e0d14afbcfd7474d4959ab43e1450f7 576 Pfam PF00085 Thioredoxin 469 566 7.1E-11 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABED_1982 3e0d14afbcfd7474d4959ab43e1450f7 576 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 174 378 4.0E-20 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ABED_1982 3e0d14afbcfd7474d4959ab43e1450f7 576 Pfam PF11412 Disulphide bond corrector protein DsbC 22 132 2.1E-17 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ABED_1982 3e0d14afbcfd7474d4959ab43e1450f7 576 Gene3D G3DSA:3.40.30.10 450 575 1.4E-33 T 14-10-2018 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 Pfam PF00384 Molybdopterin oxidoreductase 97 619 1.6E-64 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 2.4E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 935 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 SUPERFAMILY SSF53706 38 705 3.53E-160 T 14-10-2018 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 Pfam PF01568 Molydopterin dinucleotide binding domain 823 930 2.5E-23 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 SUPERFAMILY SSF50692 800 934 2.1E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 1.6E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 Gene3D G3DSA:2.40.40.20 812 935 4.2E-45 T 14-10-2018 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 SMART SM00926 40 94 4.3E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 25 2.1E-7 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABED_0333 f177042f26a9fef5d5a442b3d5a5a01d 936 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 936 31.277 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 ABED_1307 eeb09853d17f8d6b9b9d26450afdba4b 332 Gene3D G3DSA:3.90.650.10 150 332 6.7E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1307 eeb09853d17f8d6b9b9d26450afdba4b 332 Gene3D G3DSA:3.30.1330.10 6 149 4.2E-51 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_1307 eeb09853d17f8d6b9b9d26450afdba4b 332 PIRSF PIRSF005644 1 332 4.9E-119 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE ABED_1307 eeb09853d17f8d6b9b9d26450afdba4b 332 Pfam PF02769 AIR synthase related protein, C-terminal domain 159 303 1.7E-20 T 14-10-2018 IPR010918 PurM-like, C-terminal domain ABED_1307 eeb09853d17f8d6b9b9d26450afdba4b 332 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 147 3.8E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain ABED_1307 eeb09853d17f8d6b9b9d26450afdba4b 332 SUPERFAMILY SSF55326 3 147 1.34E-29 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_1307 eeb09853d17f8d6b9b9d26450afdba4b 332 SUPERFAMILY SSF56042 152 327 1.79E-37 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1307 eeb09853d17f8d6b9b9d26450afdba4b 332 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 5 332 5.2E-134 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE ABED_0332 c0568bbf5718b8c93e4b9669bc564b82 270 Gene3D G3DSA:3.30.70.3270 52 89 5.0E-5 T 14-10-2018 ABED_0332 c0568bbf5718b8c93e4b9669bc564b82 270 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 12 226 8.1E-67 T 14-10-2018 IPR004494 MauM/NapG ferredoxin-type protein ABED_0332 c0568bbf5718b8c93e4b9669bc564b82 270 SUPERFAMILY SSF54862 29 219 3.39E-26 T 14-10-2018 ABED_0332 c0568bbf5718b8c93e4b9669bc564b82 270 Pfam PF12838 4Fe-4S dicluster domain 63 118 2.8E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0332 c0568bbf5718b8c93e4b9669bc564b82 270 Pfam PF12838 4Fe-4S dicluster domain 154 207 1.3E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0332 c0568bbf5718b8c93e4b9669bc564b82 270 Gene3D G3DSA:3.30.70.20 109 176 7.5E-10 T 14-10-2018 ABED_0332 c0568bbf5718b8c93e4b9669bc564b82 270 Gene3D G3DSA:3.30.70.20 178 261 1.1E-5 T 14-10-2018 ABED_0332 c0568bbf5718b8c93e4b9669bc564b82 270 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 Hamap MF_00195 GTPase Der [der]. 5 474 33.98 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 Pfam PF01926 50S ribosome-binding GTPase 219 336 3.2E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 Pfam PF01926 50S ribosome-binding GTPase 7 122 9.3E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 129 1.9E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 380 2.8E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 2.1E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 75 93 2.1E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 391 471 2.1E-28 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 Gene3D G3DSA:3.40.50.300 211 390 1.4E-49 T 14-10-2018 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 Gene3D G3DSA:3.30.300.20 391 474 1.3E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 SUPERFAMILY SSF52540 197 473 1.65E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 PIRSF PIRSF006485 4 479 1.3E-145 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 SUPERFAMILY SSF52540 7 170 9.23E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 Gene3D G3DSA:3.40.50.300 2 179 1.7E-38 T 14-10-2018 ABED_1105 f1e93a3de8fa615fc4f33846627390da 485 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 7 470 8.6E-148 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABED_1577 875927efc234bc745efa68bd9b73e51f 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 218 6.9E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1577 875927efc234bc745efa68bd9b73e51f 221 Gene3D G3DSA:1.10.10.10 132 220 5.9E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1577 875927efc234bc745efa68bd9b73e51f 221 SUPERFAMILY SSF46894 132 219 4.82E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_1577 875927efc234bc745efa68bd9b73e51f 221 Gene3D G3DSA:3.40.50.2300 4 126 3.2E-9 T 14-10-2018 ABED_1577 875927efc234bc745efa68bd9b73e51f 221 SMART SM00862 149 219 1.5E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1577 875927efc234bc745efa68bd9b73e51f 221 SUPERFAMILY SSF52172 4 181 2.99E-9 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0620 f29c1703358a3ec5c5313710e0907ea7 332 SUPERFAMILY SSF51269 272 332 2.09E-18 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 ABED_0620 f29c1703358a3ec5c5313710e0907ea7 332 SUPERFAMILY SSF51569 2 292 3.77E-94 T 14-10-2018 ABED_0620 f29c1703358a3ec5c5313710e0907ea7 332 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 4 332 7.0E-159 T 14-10-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|MetaCyc: PWY-6749|MetaCyc: PWY-7131 ABED_0620 f29c1703358a3ec5c5313710e0907ea7 332 Pfam PF03102 NeuB family 24 265 3.7E-103 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 ABED_0620 f29c1703358a3ec5c5313710e0907ea7 332 Gene3D G3DSA:3.90.1210.10 269 332 2.9E-21 T 14-10-2018 ABED_0620 f29c1703358a3ec5c5313710e0907ea7 332 Pfam PF08666 SAF domain 282 332 4.5E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ABED_0620 f29c1703358a3ec5c5313710e0907ea7 332 Gene3D G3DSA:3.20.20.70 1 264 9.4E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 Gene3D G3DSA:3.50.50.60 141 267 6.5E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1659 abea82a304dee4eca3c151f296a6691f 458 SUPERFAMILY SSF51971 327 455 5.53E-13 T 14-10-2018 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 142 446 5.6E-34 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 SUPERFAMILY SSF46548 3 151 6.28E-34 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 Gene3D G3DSA:3.50.50.60 368 456 3.3E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1659 abea82a304dee4eca3c151f296a6691f 458 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 4 455 6.5E-163 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 PRINTS PR00419 Adrenodoxin reductase family signature 208 218 4.8E-30 T 14-10-2018 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 4.8E-30 T 14-10-2018 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 4.8E-30 T 14-10-2018 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 PRINTS PR00419 Adrenodoxin reductase family signature 282 296 4.8E-30 T 14-10-2018 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 PRINTS PR00419 Adrenodoxin reductase family signature 316 329 4.8E-30 T 14-10-2018 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 Gene3D G3DSA:1.10.1060.10 4 140 2.1E-30 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 SUPERFAMILY SSF51971 140 392 4.83E-65 T 14-10-2018 ABED_1659 abea82a304dee4eca3c151f296a6691f 458 Gene3D G3DSA:3.50.50.60 268 367 2.2E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1659 abea82a304dee4eca3c151f296a6691f 458 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 21 130 1.7E-33 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SUPERFAMILY SSF109604 529 720 3.14E-41 T 14-10-2018 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Gene3D G3DSA:3.40.50.2300 138 258 4.2E-21 T 14-10-2018 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SUPERFAMILY SSF55785 423 524 5.58E-20 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SUPERFAMILY SSF52172 137 272 1.27E-23 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SMART SM00091 270 339 0.062 T 14-10-2018 IPR000014 PAS domain ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SMART SM00091 413 479 2.0 T 14-10-2018 IPR000014 PAS domain ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Pfam PF01966 HD domain 557 679 2.7E-18 T 14-10-2018 IPR006674 HD domain ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Gene3D G3DSA:3.40.50.2300 13 137 2.5E-18 T 14-10-2018 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 392 2.5E-20 T 14-10-2018 IPR000014 PAS domain ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 413 532 2.9E-13 T 14-10-2018 IPR000014 PAS domain ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SUPERFAMILY SSF55785 283 384 4.03E-27 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Gene3D G3DSA:3.30.450.20 261 411 1.6E-30 T 14-10-2018 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Gene3D G3DSA:1.10.3210.10 531 731 1.4E-74 T 14-10-2018 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SMART SM00471 552 689 3.5E-9 T 14-10-2018 IPR003607 HD/PDEase domain ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Pfam PF00072 Response regulator receiver domain 140 250 8.4E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Pfam PF00072 Response regulator receiver domain 19 115 1.2E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SUPERFAMILY SSF52172 15 115 1.22E-18 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SMART SM00448 138 252 4.1E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SMART SM00448 17 129 3.6E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Pfam PF13426 PAS domain 424 526 6.1E-14 T 14-10-2018 IPR000014 PAS domain ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Pfam PF13426 PAS domain 284 386 6.6E-17 T 14-10-2018 IPR000014 PAS domain ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SMART SM00086 485 527 5.0E-4 T 14-10-2018 IPR001610 PAC motif ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 SMART SM00086 345 387 5.2E-9 T 14-10-2018 IPR001610 PAC motif ABED_1569 10cad4091b0f4d1b365262a1cb2e570d 731 Gene3D G3DSA:3.30.450.20 412 526 1.1E-19 T 14-10-2018 ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 Gene3D G3DSA:3.20.20.450 303 538 1.2E-70 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 Gene3D G3DSA:3.30.450.20 5 146 5.9E-17 T 14-10-2018 ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 282 3.1E-20 T 14-10-2018 IPR000160 GGDEF domain ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 SUPERFAMILY SSF55073 150 288 1.18E-25 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 139 7.4E-11 T 14-10-2018 IPR000014 PAS domain ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 SUPERFAMILY SSF55785 16 133 4.01E-12 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 SUPERFAMILY SSF141868 308 535 9.15E-66 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 SMART SM00267 134 289 2.5E-13 T 14-10-2018 IPR000160 GGDEF domain ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 283 4.5E-16 T 14-10-2018 IPR000160 GGDEF domain ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 SMART SM00052 301 537 1.4E-57 T 14-10-2018 IPR001633 EAL domain ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 Gene3D G3DSA:3.30.70.270 147 302 1.5E-28 T 14-10-2018 ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 Pfam PF08448 PAS fold 18 134 1.9E-11 T 14-10-2018 IPR013656 PAS fold-4 ABED_0325 c898aaae11573c5495e09c83d3efa78d 538 Pfam PF00563 EAL domain 308 535 3.9E-59 T 14-10-2018 IPR001633 EAL domain ABED_1163 ea1e44433b935a3db67aef8e3bb83dd9 455 SMART SM00729 47 269 9.5E-61 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_1163 ea1e44433b935a3db67aef8e3bb83dd9 455 PIRSF PIRSF000167 1 451 1.0E-166 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 ABED_1163 ea1e44433b935a3db67aef8e3bb83dd9 455 SUPERFAMILY SSF102114 9 441 5.36E-135 T 14-10-2018 ABED_1163 ea1e44433b935a3db67aef8e3bb83dd9 455 Gene3D G3DSA:3.80.30.20 1 360 3.2E-115 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABED_1163 ea1e44433b935a3db67aef8e3bb83dd9 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 455 2.5E-195 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 ABED_1163 ea1e44433b935a3db67aef8e3bb83dd9 455 Pfam PF04055 Radical SAM superfamily 52 224 2.6E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_1163 ea1e44433b935a3db67aef8e3bb83dd9 455 Pfam PF06969 HemN C-terminal domain 360 427 1.4E-8 T 14-10-2018 IPR010723 HemN, C-terminal ABED_1163 ea1e44433b935a3db67aef8e3bb83dd9 455 Gene3D G3DSA:1.10.10.920 361 455 3.1E-30 T 14-10-2018 ABED_0329 2d946c2f4e41e3fecf8aeaa1a09db0ec 158 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0329 2d946c2f4e41e3fecf8aeaa1a09db0ec 158 SUPERFAMILY SSF46548 33 154 4.34E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABED_0329 2d946c2f4e41e3fecf8aeaa1a09db0ec 158 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0329 2d946c2f4e41e3fecf8aeaa1a09db0ec 158 Pfam PF00037 4Fe-4S binding domain 71 86 1.2E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0329 2d946c2f4e41e3fecf8aeaa1a09db0ec 158 Pfam PF00037 4Fe-4S binding domain 138 155 1.5E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0329 2d946c2f4e41e3fecf8aeaa1a09db0ec 158 Gene3D G3DSA:3.30.70.20 96 157 1.6E-8 T 14-10-2018 ABED_0329 2d946c2f4e41e3fecf8aeaa1a09db0ec 158 Gene3D G3DSA:3.30.70.20 32 90 5.0E-9 T 14-10-2018 ABED_1312 34ba3e2989ab76e9d1bb7d5a68668f4d 93 Gene3D G3DSA:2.40.50.970 1 81 5.5E-30 T 14-10-2018 IPR037254 HupF/HypC superfamily ABED_1312 34ba3e2989ab76e9d1bb7d5a68668f4d 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 41 57 1.6E-11 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC ABED_1312 34ba3e2989ab76e9d1bb7d5a68668f4d 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.6E-11 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC ABED_1312 34ba3e2989ab76e9d1bb7d5a68668f4d 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 1.6E-11 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC ABED_1312 34ba3e2989ab76e9d1bb7d5a68668f4d 93 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 81 4.7E-25 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC ABED_1312 34ba3e2989ab76e9d1bb7d5a68668f4d 93 SUPERFAMILY SSF159127 1 75 1.02E-24 T 14-10-2018 IPR037254 HupF/HypC superfamily ABED_1312 34ba3e2989ab76e9d1bb7d5a68668f4d 93 Pfam PF01455 HupF/HypC family 1 67 3.3E-24 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC ABED_0921 67a4729e467e42e0c2a4fa400aba9257 419 Pfam PF01464 Transglycosylase SLT domain 85 173 1.6E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 ABED_0921 67a4729e467e42e0c2a4fa400aba9257 419 Gene3D G3DSA:3.10.350.10 361 419 1.1E-12 T 14-10-2018 IPR036779 LysM domain superfamily ABED_0921 67a4729e467e42e0c2a4fa400aba9257 419 SMART SM00257 375 418 7.1E-12 T 14-10-2018 IPR018392 LysM domain ABED_0921 67a4729e467e42e0c2a4fa400aba9257 419 SUPERFAMILY SSF54106 375 417 1.14E-8 T 14-10-2018 ABED_0921 67a4729e467e42e0c2a4fa400aba9257 419 Gene3D G3DSA:1.10.530.10 70 275 6.0E-21 T 14-10-2018 ABED_0921 67a4729e467e42e0c2a4fa400aba9257 419 SUPERFAMILY SSF53955 72 204 7.31E-23 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily ABED_0921 67a4729e467e42e0c2a4fa400aba9257 419 Pfam PF01476 LysM domain 376 417 1.6E-10 T 14-10-2018 IPR018392 LysM domain ABED_1645 ede38610288ae9c4f05e00478429b323 306 Gene3D G3DSA:3.90.550.10 1 235 4.1E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1645 ede38610288ae9c4f05e00478429b323 306 SUPERFAMILY SSF53448 2 282 7.15E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1645 ede38610288ae9c4f05e00478429b323 306 Pfam PF00535 Glycosyl transferase family 2 5 186 1.6E-17 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABED_1048 8f609e3970e74cd786c34008f58e4ea0 320 Pfam PF01032 FecCD transport family 10 314 1.2E-72 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABED_1048 8f609e3970e74cd786c34008f58e4ea0 320 Gene3D G3DSA:1.10.3470.10 2 317 1.2E-74 T 14-10-2018 IPR037294 ABC transporter, BtuC-like ABED_1048 8f609e3970e74cd786c34008f58e4ea0 320 SUPERFAMILY SSF81345 4 314 4.97E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 336 7.4E-143 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 Gene3D G3DSA:3.30.420.40 14 329 3.1E-119 T 14-10-2018 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 Gene3D G3DSA:3.30.420.40 157 319 3.1E-119 T 14-10-2018 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 SUPERFAMILY SSF53067 153 331 2.59E-41 T 14-10-2018 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 SUPERFAMILY SSF53067 10 151 1.04E-38 T 14-10-2018 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 Pfam PF06723 MreB/Mbl protein 11 336 1.2E-136 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 Gene3D G3DSA:3.90.640.10 189 261 3.1E-119 T 14-10-2018 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 5.9E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 5.9E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 5.9E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 5.9E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABED_2023 5bc0ec33b7810777a0fc91da7b9601d7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 5.9E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABED_0977 96ed34077a36f51a77dac0f751b10cd3 448 SUPERFAMILY SSF111369 212 386 1.44E-6 T 14-10-2018 ABED_0977 96ed34077a36f51a77dac0f751b10cd3 448 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 198 384 4.4E-8 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_0977 96ed34077a36f51a77dac0f751b10cd3 448 Gene3D G3DSA:2.40.50.100 210 344 2.6E-16 T 14-10-2018 ABED_0977 96ed34077a36f51a77dac0f751b10cd3 448 Gene3D G3DSA:2.40.30.170 206 405 2.6E-16 T 14-10-2018 ABED_0977 96ed34077a36f51a77dac0f751b10cd3 448 Gene3D G3DSA:3.30.450.40 1 173 6.5E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily ABED_0977 96ed34077a36f51a77dac0f751b10cd3 448 Gene3D G3DSA:1.10.287.470 244 307 2.6E-16 T 14-10-2018 ABED_1017 3e222bc652e882a5a6a8bb0904990747 652 SUPERFAMILY SSF58104 229 590 1.01E-54 T 14-10-2018 ABED_1017 3e222bc652e882a5a6a8bb0904990747 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 413 567 1.4E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1017 3e222bc652e882a5a6a8bb0904990747 652 Gene3D G3DSA:1.10.287.950 304 596 1.2E-56 T 14-10-2018 ABED_1017 3e222bc652e882a5a6a8bb0904990747 652 SMART SM00283 354 593 5.3E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0568 032388b7de982cf03c0d074ddceafe87 398 SUPERFAMILY SSF53383 3 378 3.36E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0568 032388b7de982cf03c0d074ddceafe87 398 PIRSF PIRSF005572 1 384 6.8E-116 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABED_0568 032388b7de982cf03c0d074ddceafe87 398 Gene3D G3DSA:3.40.640.10 14 258 1.0E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0568 032388b7de982cf03c0d074ddceafe87 398 Gene3D G3DSA:3.90.1150.10 3 376 1.0E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0568 032388b7de982cf03c0d074ddceafe87 398 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABED_0568 032388b7de982cf03c0d074ddceafe87 398 Pfam PF00266 Aminotransferase class-V 3 368 2.8E-79 T 14-10-2018 IPR000192 Aminotransferase class V domain ABED_0568 032388b7de982cf03c0d074ddceafe87 398 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 3 386 1.0E-198 T 14-10-2018 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 8.9E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 8.9E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 8.9E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 8.9E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 8.9E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 8.9E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 SUPERFAMILY SSF51569 2 323 3.22E-133 T 14-10-2018 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 PIRSF PIRSF001415 1 324 1.3E-140 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 319 3.1E-139 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 SMART SM01004 1 321 4.6E-220 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABED_1156 412bcdfb6dfd0c46c719473f8c8806e5 324 Gene3D G3DSA:3.20.20.70 1 324 1.4E-137 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0399 c9b43c2f4018bcd51510a0fefa73dd97 236 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 235 30.209 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABED_0399 c9b43c2f4018bcd51510a0fefa73dd97 236 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 18 33 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ABED_0399 c9b43c2f4018bcd51510a0fefa73dd97 236 SUPERFAMILY SSF53335 10 225 2.81E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0399 c9b43c2f4018bcd51510a0fefa73dd97 236 Pfam PF01209 ubiE/COQ5 methyltransferase family 3 230 1.4E-44 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABED_0399 c9b43c2f4018bcd51510a0fefa73dd97 236 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 7 235 1.2E-71 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABED_0399 c9b43c2f4018bcd51510a0fefa73dd97 236 Gene3D G3DSA:3.40.50.150 13 236 1.3E-49 T 14-10-2018 ABED_1579 b66a089cba8bc54c3be48daf8c29af0b 480 Pfam PF03824 High-affinity nickel-transport protein 242 343 7.1E-14 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 ABED_1579 b66a089cba8bc54c3be48daf8c29af0b 480 Pfam PF06226 Protein of unknown function (DUF1007) 32 159 7.4E-9 T 14-10-2018 IPR010412 Protein of unknown function DUF1007 ABED_1948 7cd4113d773f7c9191cf6436617e87a8 217 Gene3D G3DSA:1.10.150.240 20 86 1.4E-57 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABED_1948 7cd4113d773f7c9191cf6436617e87a8 217 Gene3D G3DSA:3.40.50.1000 8 208 1.4E-57 T 14-10-2018 IPR023214 HAD superfamily ABED_1948 7cd4113d773f7c9191cf6436617e87a8 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 180 2.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABED_1948 7cd4113d773f7c9191cf6436617e87a8 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 187 1.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABED_1948 7cd4113d773f7c9191cf6436617e87a8 217 SUPERFAMILY SSF56784 5 216 7.34E-57 T 14-10-2018 IPR036412 HAD-like superfamily ABED_1948 7cd4113d773f7c9191cf6436617e87a8 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 187 7.5E-35 T 14-10-2018 ABED_0704 7c71dabe1ed88d3cbb207004c0604b50 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 78 102 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0704 7c71dabe1ed88d3cbb207004c0604b50 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 102 1.6E-28 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ABED_0704 7c71dabe1ed88d3cbb207004c0604b50 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 105 23.056 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0704 7c71dabe1ed88d3cbb207004c0604b50 110 SUPERFAMILY SSF54843 2 103 6.67E-33 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0704 7c71dabe1ed88d3cbb207004c0604b50 110 Gene3D G3DSA:3.90.470.10 1 110 6.7E-35 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0704 7c71dabe1ed88d3cbb207004c0604b50 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 4 102 1.3E-34 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2008 61a9de2d4c733a2d0e2915511d0efc9d 258 SUPERFAMILY SSF48150 126 225 9.26E-13 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABED_2008 61a9de2d4c733a2d0e2915511d0efc9d 258 Gene3D G3DSA:1.10.340.30 64 175 3.3E-10 T 14-10-2018 ABED_2008 61a9de2d4c733a2d0e2915511d0efc9d 258 Gene3D G3DSA:1.10.1670.10 176 249 1.5E-6 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ABED_1732 51c0e17746279f59a4387c96b673976a 212 PIRSF PIRSF006755 9 211 4.9E-37 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABED_1732 51c0e17746279f59a4387c96b673976a 212 SUPERFAMILY SSF52540 11 190 4.72E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1732 51c0e17746279f59a4387c96b673976a 212 Pfam PF13500 AAA domain 11 206 8.4E-27 T 14-10-2018 ABED_1732 51c0e17746279f59a4387c96b673976a 212 Gene3D G3DSA:3.40.50.300 8 209 1.3E-56 T 14-10-2018 ABED_1732 51c0e17746279f59a4387c96b673976a 212 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 14 177 2.4E-37 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABED_1732 51c0e17746279f59a4387c96b673976a 212 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 10 211 22.622 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 369 385 1.5E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 478 492 1.5E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 291 300 1.5E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 1.5E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 161 179 1.5E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Pfam PF01751 Toprim domain 4 112 1.0E-28 T 14-10-2018 IPR006171 TOPRIM domain ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Gene3D G3DSA:1.10.290.10 247 384 1.3E-164 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Pfam PF01131 DNA topoisomerase 127 554 3.9E-129 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 SMART SM00436 103 191 1.7E-55 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 SMART SM00493 2 102 8.0E-29 T 14-10-2018 IPR006171 TOPRIM domain ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Gene3D G3DSA:1.10.460.10 134 556 1.3E-164 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 611 8.6E-236 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Gene3D G3DSA:3.40.50.140 1 133 8.5E-54 T 14-10-2018 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Pfam PF13368 Topoisomerase C-terminal repeat 585 641 1.8E-12 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Pfam PF13368 Topoisomerase C-terminal repeat 648 696 3.6E-13 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Pfam PF13368 Topoisomerase C-terminal repeat 705 752 2.1E-14 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 666 53.459 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 Gene3D G3DSA:2.70.20.10 183 462 1.3E-164 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 SMART SM00437 239 516 9.7E-111 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ABED_2045 ddf113500c52436dabe23d5a5ff6529c 782 SUPERFAMILY SSF56712 2 591 2.88E-188 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 Pfam PF01580 FtsK/SpoIIIE family 464 517 1.0E-14 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 Pfam PF01580 FtsK/SpoIIIE family 327 463 9.4E-46 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 Gene3D G3DSA:3.40.50.300 324 603 8.1E-106 T 14-10-2018 ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 SUPERFAMILY SSF46785 624 685 1.77E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 SMART SM00843 623 686 2.2E-28 T 14-10-2018 IPR018541 FtsK gamma domain ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 SUPERFAMILY SSF52540 301 589 1.32E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 Gene3D G3DSA:3.30.980.40 218 323 1.5E-32 T 14-10-2018 ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 Pfam PF09397 Ftsk gamma domain 625 685 1.2E-24 T 14-10-2018 IPR018541 FtsK gamma domain ABED_1100 b8803c8ed56f92c999136e6aa1a9d334 686 Gene3D G3DSA:1.10.10.10 617 684 7.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0310 0fdb2f50268bca9f8403b2c88a38bc14 701 SUPERFAMILY SSF56935 23 701 1.77E-129 T 14-10-2018 ABED_0310 0fdb2f50268bca9f8403b2c88a38bc14 701 Gene3D G3DSA:2.40.170.20 177 701 6.5E-111 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_0310 0fdb2f50268bca9f8403b2c88a38bc14 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 167 1.1E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_0310 0fdb2f50268bca9f8403b2c88a38bc14 701 Gene3D G3DSA:2.170.130.10 46 176 4.2E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_0310 0fdb2f50268bca9f8403b2c88a38bc14 701 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 701 2.0E-99 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_0310 0fdb2f50268bca9f8403b2c88a38bc14 701 Pfam PF00593 TonB dependent receptor 240 700 6.4E-57 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_1629 9c500e3fae3b79276d637376aaff6031 632 Pfam PF00884 Sulfatase 276 547 4.6E-32 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 ABED_1629 9c500e3fae3b79276d637376aaff6031 632 Gene3D G3DSA:3.30.1120.80 560 631 5.4E-96 T 14-10-2018 ABED_1629 9c500e3fae3b79276d637376aaff6031 632 PIRSF PIRSF005091 1 631 3.2E-79 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like ABED_1629 9c500e3fae3b79276d637376aaff6031 632 Gene3D G3DSA:3.40.720.10 268 559 5.4E-96 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABED_1629 9c500e3fae3b79276d637376aaff6031 632 SUPERFAMILY SSF53649 274 604 8.58E-55 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 PIRSF PIRSF500210 1 280 9.9E-91 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 Gene3D G3DSA:3.40.190.80 151 280 1.5E-40 T 14-10-2018 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 PIRSF PIRSF000904 1 280 4.1E-92 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 Gene3D G3DSA:3.30.540.10 1 149 2.1E-38 T 14-10-2018 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 SUPERFAMILY SSF56655 4 276 2.54E-71 T 14-10-2018 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 2 146 3.4E-33 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 107 125 9.7E-17 T 14-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 186 206 9.7E-17 T 14-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 37 52 9.7E-17 T 14-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 249 273 9.7E-17 T 14-10-2018 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ABED_1141 8310fdf46769a21786968ed7f9a4265d 280 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 278 31.177 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ABED_2084 003015b02edb6d2684f1156f3e3ed546 202 Pfam PF00156 Phosphoribosyl transferase domain 41 146 5.9E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABED_2084 003015b02edb6d2684f1156f3e3ed546 202 Gene3D G3DSA:3.40.50.2020 1 202 1.8E-61 T 14-10-2018 ABED_2084 003015b02edb6d2684f1156f3e3ed546 202 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 3 200 1.8E-72 T 14-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_2084 003015b02edb6d2684f1156f3e3ed546 202 SUPERFAMILY SSF53271 7 194 4.69E-37 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like ABED_2084 003015b02edb6d2684f1156f3e3ed546 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 24.961 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_1655 bfe4c05571b133f1f5a8931f2573d795 334 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 299 4.4E-47 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 ABED_1655 bfe4c05571b133f1f5a8931f2573d795 334 SUPERFAMILY SSF53756 3 332 6.8E-69 T 14-10-2018 ABED_1655 bfe4c05571b133f1f5a8931f2573d795 334 Gene3D G3DSA:3.40.50.2000 172 316 2.5E-28 T 14-10-2018 ABED_1655 bfe4c05571b133f1f5a8931f2573d795 334 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 4 328 1.5E-82 T 14-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 ABED_1655 bfe4c05571b133f1f5a8931f2573d795 334 Gene3D G3DSA:3.40.50.2000 3 159 5.6E-51 T 14-10-2018 ABED_0185 8c6d375453fda7be02da24105d6c043d 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 6.9E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABED_0185 8c6d375453fda7be02da24105d6c043d 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 216 234 6.9E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABED_0185 8c6d375453fda7be02da24105d6c043d 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 118 137 6.9E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABED_0185 8c6d375453fda7be02da24105d6c043d 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 93 109 6.9E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABED_0185 8c6d375453fda7be02da24105d6c043d 368 Gene3D G3DSA:3.40.1550.10 50 237 1.1E-45 T 14-10-2018 IPR028976 CheC-like superfamily ABED_0185 8c6d375453fda7be02da24105d6c043d 368 SUPERFAMILY SSF101801 253 331 7.98E-10 T 14-10-2018 IPR036429 SpoA-like superfamily ABED_0185 8c6d375453fda7be02da24105d6c043d 368 PIRSF PIRSF002888 1 337 3.0E-107 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABED_0185 8c6d375453fda7be02da24105d6c043d 368 SUPERFAMILY SSF103039 48 234 1.94E-18 T 14-10-2018 IPR028976 CheC-like superfamily ABED_0185 8c6d375453fda7be02da24105d6c043d 368 Pfam PF02154 Flagellar motor switch protein FliM 42 233 2.6E-52 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABED_0185 8c6d375453fda7be02da24105d6c043d 368 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 257 326 5.6E-13 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) ABED_0185 8c6d375453fda7be02da24105d6c043d 368 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 326 5.2E-78 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 Pfam PF01842 ACT domain 457 518 1.2E-7 T 14-10-2018 IPR002912 ACT domain ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 SUPERFAMILY SSF52283 17 125 4.91E-32 T 14-10-2018 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 Gene3D G3DSA:3.30.70.260 456 527 3.0E-12 T 14-10-2018 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 SUPERFAMILY SSF51735 100 285 2.29E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 284 1.4E-56 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 SUPERFAMILY SSF143548 323 451 1.65E-29 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 Gene3D G3DSA:3.30.1330.90 322 455 1.0E-28 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 6 526 8.8E-182 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 316 4.8E-31 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 Gene3D G3DSA:3.40.50.720 96 286 1.3E-101 T 14-10-2018 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 SUPERFAMILY SSF55021 446 523 5.0E-13 T 14-10-2018 ABED_1855 d62e87b77941bfc6e5563f1abe9f1321 528 Gene3D G3DSA:3.40.50.720 6 295 1.3E-101 T 14-10-2018 ABED_1758 9aed7cc61c21f0617fe9615c02288854 383 SUPERFAMILY SSF52540 178 377 2.89E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1758 9aed7cc61c21f0617fe9615c02288854 383 Gene3D G3DSA:3.40.50.300 177 364 1.6E-60 T 14-10-2018 ABED_1758 9aed7cc61c21f0617fe9615c02288854 383 Pfam PF00448 SRP54-type protein, GTPase domain 183 376 1.5E-38 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_1758 9aed7cc61c21f0617fe9615c02288854 383 SMART SM00962 182 377 5.4E-60 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_1758 9aed7cc61c21f0617fe9615c02288854 383 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 5 271 1.5E-61 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 ABED_1758 9aed7cc61c21f0617fe9615c02288854 383 Gene3D G3DSA:1.20.120.1380 126 176 1.6E-60 T 14-10-2018 ABED_1758 9aed7cc61c21f0617fe9615c02288854 383 SMART SM00382 181 328 1.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 402 59.778 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 Pfam PF03143 Elongation factor Tu C-terminal domain 306 400 1.7E-32 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 Pfam PF03144 Elongation factor Tu domain 2 233 301 3.9E-19 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 SUPERFAMILY SSF50465 310 402 4.32E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 401 2.5E-222 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 Gene3D G3DSA:2.40.30.10 214 342 3.6E-54 T 14-10-2018 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 SUPERFAMILY SSF50447 213 309 8.05E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 Pfam PF00009 Elongation factor Tu GTP binding domain 10 209 4.0E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 151 1.6E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 Gene3D G3DSA:2.40.30.10 346 401 2.8E-28 T 14-10-2018 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 Gene3D G3DSA:3.40.50.300 1 211 1.8E-67 T 14-10-2018 ABED_1713 9d4a7acb097902cd7e52cb9a47b8428f 402 SUPERFAMILY SSF52540 3 222 3.56E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 Gene3D G3DSA:3.30.300.20 181 293 2.3E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 SUPERFAMILY SSF54814 177 291 3.24E-33 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 Gene3D G3DSA:3.40.50.300 2 179 9.0E-36 T 14-10-2018 ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 Hamap MF_00367 GTPase Era [era]. 2 290 30.577 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 SUPERFAMILY SSF52540 7 176 3.96E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 Pfam PF07650 KH domain 203 278 7.2E-14 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 Pfam PF01926 50S ribosome-binding GTPase 7 118 1.1E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 157 3.2E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1531 eddcb0b7b333de129efc1c71bb8d9e87 294 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 272 2.5E-65 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1630 78b77357fde5a1099c8da6542e79c3c6 314 Gene3D G3DSA:3.40.50.2000 1 138 3.4E-21 T 14-10-2018 ABED_1630 78b77357fde5a1099c8da6542e79c3c6 314 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 145 293 6.6E-34 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 ABED_1630 78b77357fde5a1099c8da6542e79c3c6 314 SUPERFAMILY SSF53756 4 312 4.71E-77 T 14-10-2018 ABED_1630 78b77357fde5a1099c8da6542e79c3c6 314 Gene3D G3DSA:3.40.50.2000 142 314 1.7E-51 T 14-10-2018 ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 Gene3D G3DSA:3.40.50.2020 261 428 1.8E-147 T 14-10-2018 ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 Gene3D G3DSA:3.60.20.10 2 446 1.8E-147 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 PIRSF PIRSF000485 1 448 4.5E-163 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 SUPERFAMILY SSF53271 236 446 1.22E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 Pfam PF00156 Phosphoribosyl transferase domain 261 377 5.7E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 444 44.104 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 SUPERFAMILY SSF56235 2 228 7.29E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 Pfam PF13537 Glutamine amidotransferase domain 72 199 1.2E-20 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABED_1894 1b597fd4ed013b30c1bd52e0e94de62e 448 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 444 9.0E-151 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABED_1165 b8fdbcbfce7fb8f5c23c3a5b3162336c 378 Gene3D G3DSA:3.90.1150.10 256 377 1.9E-31 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1165 b8fdbcbfce7fb8f5c23c3a5b3162336c 378 PIRSF PIRSF000390 1 377 6.1E-74 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABED_1165 b8fdbcbfce7fb8f5c23c3a5b3162336c 378 SUPERFAMILY SSF53383 9 373 1.61E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1165 b8fdbcbfce7fb8f5c23c3a5b3162336c 378 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 370 2.6E-82 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABED_1165 b8fdbcbfce7fb8f5c23c3a5b3162336c 378 Gene3D G3DSA:3.40.640.10 3 253 5.2E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0342 fa45047217ca6329758dfe9bc3d6e093 221 SUPERFAMILY SSF46785 162 216 9.56E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0342 fa45047217ca6329758dfe9bc3d6e093 221 Gene3D G3DSA:1.10.10.10 149 218 1.8E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0342 fa45047217ca6329758dfe9bc3d6e093 221 SMART SM00419 161 208 4.8E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABED_0342 fa45047217ca6329758dfe9bc3d6e093 221 Pfam PF13545 Crp-like helix-turn-helix domain 167 213 6.1E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABED_0342 fa45047217ca6329758dfe9bc3d6e093 221 Gene3D G3DSA:2.60.120.10 8 143 1.4E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0342 fa45047217ca6329758dfe9bc3d6e093 221 SMART SM00100 12 132 0.0024 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain ABED_0342 fa45047217ca6329758dfe9bc3d6e093 221 Pfam PF00027 Cyclic nucleotide-binding domain 32 117 4.6E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain ABED_0342 fa45047217ca6329758dfe9bc3d6e093 221 SUPERFAMILY SSF51206 6 139 1.7E-24 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like ABED_0516 9586a8c558925a8031ddb376ca6a731e 226 Pfam PF00005 ABC transporter 31 172 4.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0516 9586a8c558925a8031ddb376ca6a731e 226 Gene3D G3DSA:3.40.50.300 15 225 2.9E-54 T 14-10-2018 ABED_0516 9586a8c558925a8031ddb376ca6a731e 226 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0516 9586a8c558925a8031ddb376ca6a731e 226 SMART SM00382 39 220 2.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0516 9586a8c558925a8031ddb376ca6a731e 226 SUPERFAMILY SSF52540 16 219 1.04E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0516 9586a8c558925a8031ddb376ca6a731e 226 PRINTS PR01868 ABC transporter family E signature 44 69 2.4E-6 T 14-10-2018 IPR013283 RLI1 Reactome: R-HSA-909733 ABED_0516 9586a8c558925a8031ddb376ca6a731e 226 PRINTS PR01868 ABC transporter family E signature 17 37 2.4E-6 T 14-10-2018 IPR013283 RLI1 Reactome: R-HSA-909733 ABED_0438 feb094f1a72ad48c8e8d1cd668d13657 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 3.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_0438 feb094f1a72ad48c8e8d1cd668d13657 198 SUPERFAMILY SSF48498 82 190 2.08E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABED_0438 feb094f1a72ad48c8e8d1cd668d13657 198 SUPERFAMILY SSF46689 3 85 2.41E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0438 feb094f1a72ad48c8e8d1cd668d13657 198 Gene3D G3DSA:1.10.357.10 55 195 4.6E-9 T 14-10-2018 ABED_0438 feb094f1a72ad48c8e8d1cd668d13657 198 Gene3D G3DSA:1.10.10.60 9 54 4.7E-9 T 14-10-2018 ABED_0313 2340bec550eb95b9f3ca3381f0765878 329 Pfam PF00891 O-methyltransferase 138 310 8.0E-18 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 ABED_0313 2340bec550eb95b9f3ca3381f0765878 329 Gene3D G3DSA:3.40.50.150 115 322 3.8E-28 T 14-10-2018 ABED_0313 2340bec550eb95b9f3ca3381f0765878 329 SUPERFAMILY SSF53335 89 314 1.86E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0313 2340bec550eb95b9f3ca3381f0765878 329 Gene3D G3DSA:1.10.10.10 3 79 3.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0313 2340bec550eb95b9f3ca3381f0765878 329 Pfam PF16864 Dimerisation domain 17 81 6.2E-7 T 14-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain ABED_0313 2340bec550eb95b9f3ca3381f0765878 329 PIRSF PIRSF005739 1 320 5.1E-7 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 SUPERFAMILY SSF47807 168 259 5.08E-28 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Gene3D G3DSA:3.40.50.1010 6 250 1.5E-84 T 14-10-2018 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 TIGRFAM TIGR00593 pola: DNA polymerase I 6 896 2.9E-266 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 SUPERFAMILY SSF56672 495 896 6.56E-137 T 14-10-2018 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Pfam PF00476 DNA polymerase family A 525 894 1.6E-136 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Gene3D G3DSA:3.30.420.10 305 514 3.0E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 ProSitePatterns PS00447 DNA polymerase family A signature. 724 743 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Gene3D G3DSA:1.20.1060.10 516 631 6.9E-38 T 14-10-2018 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 716 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 761 772 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 673 696 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 783 794 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 628 650 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 724 749 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 830 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 843 856 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 651 666 1.3E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Gene3D G3DSA:1.10.150.20 172 245 1.5E-84 T 14-10-2018 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Pfam PF01612 3'-5' exonuclease 316 482 2.0E-25 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 SMART SM00475 2 260 2.1E-100 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 SUPERFAMILY SSF88723 1 168 1.43E-45 T 14-10-2018 IPR029060 PIN-like domain superfamily ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 SUPERFAMILY SSF53098 307 488 1.48E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 257 3.1E-29 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 SMART SM00279 171 206 9.8E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Gene3D G3DSA:1.10.150.20 682 821 4.2E-97 T 14-10-2018 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 SMART SM00474 308 488 6.9E-21 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Gene3D G3DSA:3.30.70.370 635 892 4.2E-97 T 14-10-2018 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 168 1.2E-43 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ABED_1185 23d1da62a8ccab169b67faf1578b607e 896 SMART SM00482 659 860 6.6E-87 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_0027 710ea3e7d2e0ea585b72bbb13d216f4d 328 Pfam PF00107 Zinc-binding dehydrogenase 159 268 1.7E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABED_0027 710ea3e7d2e0ea585b72bbb13d216f4d 328 SUPERFAMILY SSF51735 117 292 1.46E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0027 710ea3e7d2e0ea585b72bbb13d216f4d 328 Gene3D G3DSA:3.40.50.720 126 294 5.3E-115 T 14-10-2018 ABED_0027 710ea3e7d2e0ea585b72bbb13d216f4d 328 SMART SM00829 10 324 2.2E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABED_0027 710ea3e7d2e0ea585b72bbb13d216f4d 328 Gene3D G3DSA:3.90.180.10 18 325 5.3E-115 T 14-10-2018 ABED_0027 710ea3e7d2e0ea585b72bbb13d216f4d 328 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 326 1.5E-130 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI ABED_0027 710ea3e7d2e0ea585b72bbb13d216f4d 328 SUPERFAMILY SSF50129 2 144 1.26E-32 T 14-10-2018 IPR011032 GroES-like superfamily ABED_1915 adc8583a124b1116d292195804007870 436 Gene3D G3DSA:2.30.42.10 95 182 3.7E-84 T 14-10-2018 ABED_1915 adc8583a124b1116d292195804007870 436 SUPERFAMILY SSF52096 33 359 4.97E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABED_1915 adc8583a124b1116d292195804007870 436 SMART SM00228 95 166 3.8E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 ABED_1915 adc8583a124b1116d292195804007870 436 SMART SM00245 168 358 2.8E-78 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABED_1915 adc8583a124b1116d292195804007870 436 Pfam PF03572 Peptidase family S41 195 356 3.4E-56 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABED_1915 adc8583a124b1116d292195804007870 436 Pfam PF13180 PDZ domain 95 174 1.2E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 ABED_1915 adc8583a124b1116d292195804007870 436 Gene3D G3DSA:3.30.750.44 47 333 3.7E-84 T 14-10-2018 ABED_1915 adc8583a124b1116d292195804007870 436 SUPERFAMILY SSF50156 67 186 7.19E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 ABED_1915 adc8583a124b1116d292195804007870 436 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 375 8.4E-110 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ABED_1915 adc8583a124b1116d292195804007870 436 Gene3D G3DSA:3.90.226.10 183 355 3.7E-84 T 14-10-2018 ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 SUPERFAMILY SSF52172 1 106 5.41E-25 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 Pfam PF00072 Response regulator receiver domain 4 104 2.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 Gene3D G3DSA:3.40.50.180 163 357 4.3E-66 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 SUPERFAMILY SSF52738 170 355 3.79E-64 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 Pfam PF01339 CheB methylesterase 172 350 9.7E-57 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 355 33.404 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 PIRSF PIRSF000876 1 358 2.8E-110 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 SMART SM00448 2 115 1.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1117 db2fe4c58d5e695f395640b7fd646116 359 Gene3D G3DSA:3.40.50.2300 1 120 3.0E-24 T 14-10-2018 ABED_0318 99bcb20ef23cfc8088e939ec074b3c87 99 Gene3D G3DSA:1.20.58.1000 5 99 3.0E-13 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily ABED_0318 99bcb20ef23cfc8088e939ec074b3c87 99 Pfam PF02583 Metal-sensitive transcriptional repressor 8 95 2.3E-13 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ABED_0763 c4a4b8301b59e2454bb2bff40c18c73f 317 Pfam PF04463 Protein of unknown function (DUF523) 4 145 6.3E-32 T 14-10-2018 IPR007553 Domain of unknown function DUF523 ABED_0763 c4a4b8301b59e2454bb2bff40c18c73f 317 Pfam PF08349 Protein of unknown function (DUF1722) 188 304 2.3E-35 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 ABED_0763 c4a4b8301b59e2454bb2bff40c18c73f 317 PIRSF PIRSF037004 1 313 1.1E-104 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 SUPERFAMILY SSF54826 4 135 6.27E-52 T 14-10-2018 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 PRINTS PR00148 Enolase signature 37 51 2.1E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 PRINTS PR00148 Enolase signature 160 173 2.1E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 PRINTS PR00148 Enolase signature 312 323 2.1E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 PRINTS PR00148 Enolase signature 364 381 2.1E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 PRINTS PR00148 Enolase signature 335 349 2.1E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 PRINTS PR00148 Enolase signature 106 122 2.1E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 PIRSF PIRSF001400 2 425 1.0E-187 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 Gene3D G3DSA:3.30.390.10 3 125 6.1E-51 T 14-10-2018 IPR029017 Enolase-like, N-terminal ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 421 1.4E-120 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 SUPERFAMILY SSF51604 137 419 1.05E-121 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 SMART SM01192 138 425 1.4E-205 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 Gene3D G3DSA:3.20.20.120 127 426 4.2E-135 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 SMART SM01193 4 133 3.0E-87 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 Hamap MF_00318 Enolase [eno]. 2 412 42.963 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 Pfam PF03952 Enolase, N-terminal domain 4 133 5.4E-55 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 ProSitePatterns PS00164 Enolase signature. 335 348 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_2050 ef2ac5561904cf3f018e8917050b64cf 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 2.2E-204 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 SUPERFAMILY SSF55008 4 69 1.83E-10 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 Gene3D G3DSA:3.40.50.1000 374 638 2.6E-82 T 14-10-2018 IPR023214 HAD superfamily ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 SUPERFAMILY SSF81665 142 387 4.45E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 Gene3D G3DSA:2.70.150.20 184 296 1.4E-24 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 395 401 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 541 3.2E-17 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 241 255 3.2E-17 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 585 604 3.2E-17 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 393 407 3.2E-17 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 621 3.2E-17 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 Pfam PF00122 E1-E2 ATPase 193 373 5.2E-44 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00941 Cadmium-transporting ATPase signature 121 133 7.5E-10 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00941 Cadmium-transporting ATPase signature 276 290 7.5E-10 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00941 Cadmium-transporting ATPase signature 176 196 7.5E-10 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 PRINTS PR00941 Cadmium-transporting ATPase signature 15 36 7.5E-10 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 SUPERFAMILY SSF56784 392 686 1.87E-49 T 14-10-2018 IPR036412 HAD-like superfamily ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 163 660 9.3E-75 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 Pfam PF00702 haloacid dehalogenase-like hydrolase 392 599 2.6E-32 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 142 687 5.3E-161 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 142 690 8.1E-144 T 14-10-2018 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 Gene3D G3DSA:3.40.1110.10 404 515 2.6E-82 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 Pfam PF00403 Heavy-metal-associated domain 4 63 9.4E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 SUPERFAMILY SSF81653 194 291 3.53E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABED_1690 e5cda366dc53cd3dd30cb036ff30175a 707 Gene3D G3DSA:3.30.70.100 2 78 7.4E-10 T 14-10-2018 ABED_1297 deb52ac27f07c1e68de51e49a3778e31 169 PIRSF PIRSF031551 1 169 4.6E-54 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 ABED_1297 deb52ac27f07c1e68de51e49a3778e31 169 Gene3D G3DSA:1.20.120.450 1 169 7.5E-59 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABED_1297 deb52ac27f07c1e68de51e49a3778e31 169 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 1.1E-53 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 SMART SM00260 17 156 2.6E-4 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 Gene3D G3DSA:3.40.50.2300 167 301 3.2E-19 T 14-10-2018 ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 Pfam PF01584 CheW-like domain 22 159 3.1E-17 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 Gene3D G3DSA:2.40.50.180 39 155 1.4E-16 T 14-10-2018 ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 Pfam PF00072 Response regulator receiver domain 183 292 7.4E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 Gene3D G3DSA:2.30.30.40 30 150 1.4E-16 T 14-10-2018 ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 SUPERFAMILY SSF52172 180 288 2.99E-18 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 SUPERFAMILY SSF50341 18 160 4.05E-20 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABED_0573 6bc9bd991a6f09a43aa78875c4dad84c 302 SMART SM00448 181 299 1.3E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0389 8358e5b8bce7cf3a13ea15df17d15b8d 226 Gene3D G3DSA:3.40.50.2300 1 120 9.4E-32 T 14-10-2018 ABED_0389 8358e5b8bce7cf3a13ea15df17d15b8d 226 SMART SM00862 147 224 2.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0389 8358e5b8bce7cf3a13ea15df17d15b8d 226 SUPERFAMILY SSF52172 3 124 8.97E-36 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0389 8358e5b8bce7cf3a13ea15df17d15b8d 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 5.7E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0389 8358e5b8bce7cf3a13ea15df17d15b8d 226 SUPERFAMILY SSF46894 134 225 6.24E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_0389 8358e5b8bce7cf3a13ea15df17d15b8d 226 Gene3D G3DSA:1.10.10.10 121 226 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0389 8358e5b8bce7cf3a13ea15df17d15b8d 226 SMART SM00448 2 112 3.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0389 8358e5b8bce7cf3a13ea15df17d15b8d 226 Pfam PF00072 Response regulator receiver domain 4 112 1.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 8.1E-62 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 39.831 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 1.5E-57 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 SUPERFAMILY SSF53098 2 152 2.43E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 Gene3D G3DSA:3.30.420.10 3 153 2.3E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 4.3E-22 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 4.3E-22 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 4.3E-22 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 4.3E-22 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 4.3E-22 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ABED_2158 128f8ffb722fedf2b8f1ea161c209ab5 154 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 ABED_1340 eb91c45006d7ffe70d737e7b60ea5184 449 Pfam PF00374 Nickel-dependent hydrogenase 36 117 8.5E-15 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 ABED_1340 eb91c45006d7ffe70d737e7b60ea5184 449 Pfam PF00374 Nickel-dependent hydrogenase 136 449 2.9E-28 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 ABED_1340 eb91c45006d7ffe70d737e7b60ea5184 449 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 36 61 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 ABED_1340 eb91c45006d7ffe70d737e7b60ea5184 449 Gene3D G3DSA:1.10.645.10 2 449 5.6E-97 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1340 eb91c45006d7ffe70d737e7b60ea5184 449 SUPERFAMILY SSF56762 7 449 2.35E-74 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1533 377926a987a082a2f3bc926c4415fae9 444 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 351 442 7.5E-21 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain ABED_1533 377926a987a082a2f3bc926c4415fae9 444 SUPERFAMILY SSF54211 3 108 2.35E-13 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1533 377926a987a082a2f3bc926c4415fae9 444 SUPERFAMILY SSF52540 144 443 1.53E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1533 377926a987a082a2f3bc926c4415fae9 444 Gene3D G3DSA:3.30.230.10 1 110 2.7E-6 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_1533 377926a987a082a2f3bc926c4415fae9 444 Pfam PF13541 Subunit ChlI of Mg-chelatase 3 80 3.1E-19 T 14-10-2018 ABED_1533 377926a987a082a2f3bc926c4415fae9 444 Pfam PF01078 Magnesium chelatase, subunit ChlI 144 341 6.6E-72 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain ABED_1533 377926a987a082a2f3bc926c4415fae9 444 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 4 442 5.1E-112 T 14-10-2018 IPR004482 Mg chelatase-related protein ABED_1533 377926a987a082a2f3bc926c4415fae9 444 Gene3D G3DSA:3.40.50.300 128 444 4.5E-42 T 14-10-2018 ABED_2154 fa25e34f59548cd4cdc6e857bbe77b83 273 SUPERFAMILY SSF69796 151 272 3.4E-21 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 ABED_2154 fa25e34f59548cd4cdc6e857bbe77b83 273 Gene3D G3DSA:3.30.1360.170 30 273 1.9E-23 T 14-10-2018 ABED_2154 fa25e34f59548cd4cdc6e857bbe77b83 273 Pfam PF02511 Thymidylate synthase complementing protein 153 272 5.9E-23 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 ABED_0271 f7545b6866426288ab3310c0527b485f 440 Gene3D G3DSA:1.10.720.10 24 70 4.5E-11 T 14-10-2018 ABED_0271 f7545b6866426288ab3310c0527b485f 440 Pfam PF07497 Rho termination factor, RNA-binding domain 76 148 2.8E-25 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 ABED_0271 f7545b6866426288ab3310c0527b485f 440 SMART SM00959 29 71 3.9E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ABED_0271 f7545b6866426288ab3310c0527b485f 440 Gene3D G3DSA:3.40.50.300 156 439 6.3E-122 T 14-10-2018 ABED_0271 f7545b6866426288ab3310c0527b485f 440 SUPERFAMILY SSF50249 73 148 1.54E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0271 f7545b6866426288ab3310c0527b485f 440 TIGRFAM TIGR00767 rho: transcription termination factor Rho 26 440 7.3E-201 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ABED_0271 f7545b6866426288ab3310c0527b485f 440 SUPERFAMILY SSF68912 26 70 3.92E-8 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily ABED_0271 f7545b6866426288ab3310c0527b485f 440 Pfam PF07498 Rho termination factor, N-terminal domain 29 71 4.6E-12 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ABED_0271 f7545b6866426288ab3310c0527b485f 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 182 385 1.2E-19 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_0271 f7545b6866426288ab3310c0527b485f 440 SUPERFAMILY SSF52540 115 393 1.9E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0271 f7545b6866426288ab3310c0527b485f 440 SMART SM00382 192 350 9.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0271 f7545b6866426288ab3310c0527b485f 440 Gene3D G3DSA:2.40.50.140 71 148 3.6E-27 T 14-10-2018 ABED_0271 f7545b6866426288ab3310c0527b485f 440 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 440 212.113 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ABED_0271 f7545b6866426288ab3310c0527b485f 440 SMART SM00357 76 143 3.3E-11 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 ABED_1656 12aeb644d44a28e11c980956776847fd 489 Gene3D G3DSA:3.30.420.150 111 297 2.8E-45 T 14-10-2018 ABED_1656 12aeb644d44a28e11c980956776847fd 489 Pfam PF02541 Ppx/GppA phosphatase family 19 301 3.6E-62 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 ABED_1656 12aeb644d44a28e11c980956776847fd 489 SUPERFAMILY SSF109604 312 467 1.91E-17 T 14-10-2018 ABED_1656 12aeb644d44a28e11c980956776847fd 489 Gene3D G3DSA:3.30.420.40 1 110 2.8E-27 T 14-10-2018 ABED_1656 12aeb644d44a28e11c980956776847fd 489 PIRSF PIRSF001267 1 481 1.3E-83 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 ABED_1656 12aeb644d44a28e11c980956776847fd 489 SUPERFAMILY SSF53067 6 127 1.76E-27 T 14-10-2018 ABED_1656 12aeb644d44a28e11c980956776847fd 489 SUPERFAMILY SSF53067 129 299 2.72E-37 T 14-10-2018 ABED_1656 12aeb644d44a28e11c980956776847fd 489 Gene3D G3DSA:1.10.3210.10 311 482 3.3E-13 T 14-10-2018 ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 SMART SM00091 374 440 4.8E-5 T 14-10-2018 IPR000014 PAS domain ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 SUPERFAMILY SSF55874 571 727 2.33E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 Gene3D G3DSA:3.30.565.10 575 729 5.4E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 Pfam PF08448 PAS fold 380 489 6.8E-13 T 14-10-2018 IPR013656 PAS fold-4 ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 SUPERFAMILY SSF55785 359 486 5.58E-18 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 Gene3D G3DSA:1.10.287.130 489 569 8.3E-10 T 14-10-2018 ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 617 727 1.7E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 Gene3D G3DSA:3.30.450.20 361 488 3.0E-17 T 14-10-2018 ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 SMART SM00387 616 729 1.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 Gene3D G3DSA:3.40.50.2300 78 297 1.7E-16 T 14-10-2018 ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 Gene3D G3DSA:3.40.50.2300 142 316 1.7E-16 T 14-10-2018 ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 379 494 1.6E-10 T 14-10-2018 IPR000014 PAS domain ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 SUPERFAMILY SSF47384 498 572 4.12E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0035 d56045534ba9965aa808c00e83d7ee6d 730 Pfam PF04392 ABC transporter substrate binding protein 112 316 5.5E-10 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 SUPERFAMILY SSF56801 653 1153 4.19E-87 T 14-10-2018 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 Gene3D G3DSA:3.40.50.12780 615 1051 1.7E-76 T 14-10-2018 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 ProSitePatterns PS00455 Putative AMP-binding domain signature. 800 811 - T 14-10-2018 IPR020845 AMP-binding, conserved site ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 Gene3D G3DSA:1.20.1250.20 5 422 9.5E-26 T 14-10-2018 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 Pfam PF07690 Major Facilitator Superfamily 43 385 2.1E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 SUPERFAMILY SSF69593 385 594 5.1E-25 T 14-10-2018 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 Pfam PF01553 Acyltransferase 441 566 8.1E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 Gene3D G3DSA:3.30.300.30 1059 1158 2.0E-5 T 14-10-2018 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 SMART SM00563 455 569 1.6E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 Pfam PF00501 AMP-binding enzyme 669 1055 6.2E-70 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABED_0178 2d7175bf71472bc65dbc33b7ef7c9c8d 1160 SUPERFAMILY SSF103473 13 421 3.27E-24 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_0514 54a4a785feab5987d151790afc7d3584 265 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 224 1.4E-105 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0514 54a4a785feab5987d151790afc7d3584 265 PRINTS PR00395 Ribosomal protein S2 signature 4 22 4.8E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0514 54a4a785feab5987d151790afc7d3584 265 PRINTS PR00395 Ribosomal protein S2 signature 156 173 4.8E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0514 54a4a785feab5987d151790afc7d3584 265 PRINTS PR00395 Ribosomal protein S2 signature 85 102 4.8E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0514 54a4a785feab5987d151790afc7d3584 265 PRINTS PR00395 Ribosomal protein S2 signature 173 184 4.8E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0514 54a4a785feab5987d151790afc7d3584 265 PRINTS PR00395 Ribosomal protein S2 signature 35 44 4.8E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0514 54a4a785feab5987d151790afc7d3584 265 PRINTS PR00395 Ribosomal protein S2 signature 194 208 4.8E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0514 54a4a785feab5987d151790afc7d3584 265 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ABED_0514 54a4a785feab5987d151790afc7d3584 265 Pfam PF00318 Ribosomal protein S2 7 222 1.2E-92 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0514 54a4a785feab5987d151790afc7d3584 265 Gene3D G3DSA:1.10.287.610 101 148 1.1E-87 T 14-10-2018 ABED_0514 54a4a785feab5987d151790afc7d3584 265 Gene3D G3DSA:3.40.50.10490 7 217 1.1E-87 T 14-10-2018 ABED_0514 54a4a785feab5987d151790afc7d3584 265 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 38.88 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0514 54a4a785feab5987d151790afc7d3584 265 SUPERFAMILY SSF52313 4 233 5.76E-92 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 Pfam PF03129 Anticodon binding domain 357 413 3.7E-6 T 14-10-2018 IPR004154 Anticodon-binding ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 SUPERFAMILY SSF52954 332 413 9.32E-12 T 14-10-2018 ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 SUPERFAMILY SSF55681 12 322 2.79E-91 T 14-10-2018 ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 Pfam PF13393 Histidyl-tRNA synthetase 17 318 8.0E-39 T 14-10-2018 ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 Gene3D G3DSA:3.30.930.10 9 327 2.1E-109 T 14-10-2018 ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 PIRSF PIRSF001549 8 413 1.8E-113 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 10 412 29.735 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 Gene3D G3DSA:3.40.50.800 328 413 2.7E-12 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily ABED_0911 69b7bec87e4434d197b775587d4a6d3c 413 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 13 407 8.6E-137 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ABED_1470 85115789f505c3db23cdec63b1b452be 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 228 4.3E-48 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_1470 85115789f505c3db23cdec63b1b452be 231 Gene3D G3DSA:3.40.50.1580 1 231 3.1E-67 T 14-10-2018 ABED_1470 85115789f505c3db23cdec63b1b452be 231 SUPERFAMILY SSF53167 3 229 1.7E-66 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ABED_1470 85115789f505c3db23cdec63b1b452be 231 Pfam PF01048 Phosphorylase superfamily 3 226 1.1E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ABED_0783 d0f65582d0d37c1e76f235af3d0839f0 213 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 212 4.2E-89 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABED_0783 d0f65582d0d37c1e76f235af3d0839f0 213 PIRSF PIRSF001461 1 213 7.8E-91 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABED_0783 d0f65582d0d37c1e76f235af3d0839f0 213 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 1.7E-80 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABED_0783 d0f65582d0d37c1e76f235af3d0839f0 213 Gene3D G3DSA:3.20.20.70 1 213 1.3E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0783 d0f65582d0d37c1e76f235af3d0839f0 213 SUPERFAMILY SSF51366 1 212 1.77E-67 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABED_0783 d0f65582d0d37c1e76f235af3d0839f0 213 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 Gene3D G3DSA:3.10.20.70 7 109 4.6E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 263 278 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 SUPERFAMILY SSF54368 8 106 2.09E-34 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 Pfam PF00120 Glutamine synthetase, catalytic domain 108 471 4.3E-128 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 473 1.0E-193 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 SUPERFAMILY SSF55931 108 474 1.18E-126 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 Gene3D G3DSA:3.30.590.10 110 457 8.9E-131 T 14-10-2018 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 99 7.8E-32 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ABED_1719 af27d3aeff1a55ec6d5bca9339098bd8 475 SMART SM01230 107 384 4.2E-142 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABED_0709 7c0fb2ef538d03d79ae97fb512788e31 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.5E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABED_0709 7c0fb2ef538d03d79ae97fb512788e31 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.884 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABED_0709 7c0fb2ef538d03d79ae97fb512788e31 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0709 7c0fb2ef538d03d79ae97fb512788e31 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0709 7c0fb2ef538d03d79ae97fb512788e31 122 SMART SM01374 1 122 3.3E-84 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABED_0709 7c0fb2ef538d03d79ae97fb512788e31 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.2E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 ABED_0709 7c0fb2ef538d03d79ae97fb512788e31 122 SUPERFAMILY SSF50193 1 122 1.57E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_1692 1d4ab9203928ea01c17efce0b7a89dd6 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 166 5.1E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1692 1d4ab9203928ea01c17efce0b7a89dd6 705 Pfam PF00593 TonB dependent receptor 277 704 2.1E-42 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_1692 1d4ab9203928ea01c17efce0b7a89dd6 705 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 688 705 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site ABED_1692 1d4ab9203928ea01c17efce0b7a89dd6 705 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 705 5.7E-93 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_1692 1d4ab9203928ea01c17efce0b7a89dd6 705 SUPERFAMILY SSF56935 28 705 2.75E-111 T 14-10-2018 ABED_1692 1d4ab9203928ea01c17efce0b7a89dd6 705 Gene3D G3DSA:2.170.130.10 48 176 6.3E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_1692 1d4ab9203928ea01c17efce0b7a89dd6 705 Gene3D G3DSA:2.40.170.20 179 705 6.1E-147 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Gene3D G3DSA:3.30.450.20 29 189 9.4E-17 T 14-10-2018 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Pfam PF13188 PAS domain 843 876 0.047 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00086 665 705 7.9 T 14-10-2018 IPR001610 PAC motif ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00086 409 451 4.9 T 14-10-2018 IPR001610 PAC motif ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00086 539 582 1.3E-9 T 14-10-2018 IPR001610 PAC motif ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00086 789 829 22.0 T 14-10-2018 IPR001610 PAC motif ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SUPERFAMILY SSF55073 970 1121 8.63E-40 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Pfam PF08447 PAS fold 358 444 1.3E-20 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Pfam PF08447 PAS fold 488 576 4.6E-20 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Gene3D G3DSA:2.10.70.100 537 583 5.6E-7 T 14-10-2018 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Pfam PF02743 Cache domain 47 259 6.3E-16 T 14-10-2018 IPR033479 Double Cache domain 1 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Gene3D G3DSA:3.30.70.270 956 1122 5.6E-47 T 14-10-2018 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Pfam PF13426 PAS domain 607 704 1.2E-6 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Pfam PF13426 PAS domain 728 827 1.2E-4 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 961 1120 4.4E-42 T 14-10-2018 IPR000160 GGDEF domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SUPERFAMILY SSF55785 338 453 2.58E-18 T 14-10-2018 IPR035965 PAS domain superfamily ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 463 583 5.1E-14 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 718 836 2.5E-11 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 335 456 1.2E-8 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 595 711 4.3E-13 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SUPERFAMILY SSF55785 720 827 4.19E-12 T 14-10-2018 IPR035965 PAS domain superfamily ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Gene3D G3DSA:3.30.450.20 461 531 6.0E-17 T 14-10-2018 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SUPERFAMILY SSF55785 469 583 5.64E-22 T 14-10-2018 IPR035965 PAS domain superfamily ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Gene3D G3DSA:3.30.450.20 832 952 3.6E-5 T 14-10-2018 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SUPERFAMILY SSF55785 579 703 6.13E-13 T 14-10-2018 IPR035965 PAS domain superfamily ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00091 717 784 3.0 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00091 594 660 0.0012 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00091 332 402 7.8E-5 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00091 463 532 6.2E-4 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00091 841 908 12.0 T 14-10-2018 IPR000014 PAS domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Gene3D G3DSA:3.30.450.20 330 447 1.4E-20 T 14-10-2018 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Pfam PF00990 Diguanylate cyclase, GGDEF domain 967 1118 9.1E-40 T 14-10-2018 IPR000160 GGDEF domain ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Gene3D G3DSA:3.30.450.20 587 702 1.0E-15 T 14-10-2018 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 Gene3D G3DSA:3.30.450.20 709 826 1.7E-15 T 14-10-2018 ABED_2140 ce44a297fcdc16c0b7f0e91386730c61 1122 SMART SM00267 954 1122 2.5E-41 T 14-10-2018 IPR000160 GGDEF domain ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 174 2.0E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 SUPERFAMILY SSF54211 221 389 7.97E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Gene3D G3DSA:3.30.230.10 220 396 7.8E-67 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 773 92.916 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 6 16 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 372 392 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 726 738 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 742 758 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 181 196 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 468 477 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 358 372 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 196 209 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 240 258 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR01159 DNA gyrase subunit B signature 310 326 6.5E-61 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 701 762 3.0E-28 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 705 721 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 484 500 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 418 432 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 522 534 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 PRINTS PR00418 DNA topoisomerase II family signature 502 519 4.1E-70 T 14-10-2018 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 SMART SM00387 31 176 7.3E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Pfam PF01751 Toprim domain 417 526 1.6E-18 T 14-10-2018 IPR006171 TOPRIM domain ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 773 1.7E-290 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 SMART SM00433 35 766 1.5E-265 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 SUPERFAMILY SSF56719 392 768 8.89E-84 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 ProSitePatterns PS00177 DNA topoisomerase II signature. 420 428 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Gene3D G3DSA:3.30.565.10 2 219 2.8E-86 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 SUPERFAMILY SSF55874 6 218 1.86E-67 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Gene3D G3DSA:3.40.50.670 652 773 6.4E-25 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Gene3D G3DSA:3.40.50.670 397 636 3.5E-73 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABED_0003 3ca375bf309cb11dd9b595c2cfa1f5db 773 Pfam PF00204 DNA gyrase B 221 388 5.5E-56 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABED_0348 f0d0518d645d351e219d73078d73dbdc 143 Pfam PF13380 CoA binding domain 23 138 5.8E-41 T 14-10-2018 IPR003781 CoA-binding GO:0048037 ABED_0348 f0d0518d645d351e219d73078d73dbdc 143 Gene3D G3DSA:3.40.50.720 6 143 1.1E-44 T 14-10-2018 ABED_0348 f0d0518d645d351e219d73078d73dbdc 143 SUPERFAMILY SSF51735 9 140 2.41E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0348 f0d0518d645d351e219d73078d73dbdc 143 SMART SM00881 18 112 6.7E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 ABED_0835 498d42f5d0fa050337bc96b0a90ee12e 208 Pfam PF03575 Peptidase family S51 9 200 8.5E-57 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ABED_0835 498d42f5d0fa050337bc96b0a90ee12e 208 SUPERFAMILY SSF52317 1 197 1.07E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0835 498d42f5d0fa050337bc96b0a90ee12e 208 Gene3D G3DSA:3.40.50.880 1 202 5.7E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 SUPERFAMILY SSF54999 3 98 4.19E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 9.5E-43 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 Gene3D G3DSA:3.30.70.600 1 100 8.5E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 Pfam PF00338 Ribosomal protein S10p/S20e 5 98 2.6E-33 T 14-10-2018 IPR027486 Ribosomal protein S10 domain ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 26.403 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 SMART SM01403 5 99 2.3E-49 T 14-10-2018 IPR027486 Ribosomal protein S10 domain ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 2.5E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 2.5E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0698 dca8bda4be6609a3f619991c65b9015c 104 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 2.5E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 Gene3D G3DSA:3.40.50.150 70 276 1.6E-50 T 14-10-2018 ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 56 2.0E-6 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 Gene3D G3DSA:1.10.155.10 2 69 2.1E-7 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 SUPERFAMILY SSF47757 6 70 9.42E-7 T 14-10-2018 ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 SUPERFAMILY SSF53335 71 273 1.35E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 2.6E-27 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 2.6E-27 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 PRINTS PR00996 Glutamate methyltransferase family signature 101 121 2.6E-27 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 2.6E-27 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 2.6E-27 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 71 261 1.4E-48 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ABED_1115 95ef200dca18be0b83f4a39a3ba672ed 280 SMART SM00138 5 276 1.0E-58 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABED_1193 482728ca91e924a1847418ec7de3b69d 82 SUPERFAMILY SSF55174 1 77 8.37E-16 T 14-10-2018 ABED_1193 482728ca91e924a1847418ec7de3b69d 82 PIRSF PIRSF038881 1 82 1.2E-22 T 14-10-2018 IPR025490 RNA-binding protein, HP1423 type ABED_1193 482728ca91e924a1847418ec7de3b69d 82 Gene3D G3DSA:3.10.290.10 1 82 8.3E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABED_1193 482728ca91e924a1847418ec7de3b69d 82 Pfam PF01479 S4 domain 1 47 2.2E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1193 482728ca91e924a1847418ec7de3b69d 82 SMART SM00363 1 64 1.4E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1145 5c3248fffd896068ce9448e7b6c60ad3 218 Gene3D G3DSA:2.10.109.10 93 215 7.7E-10 T 14-10-2018 ABED_1145 5c3248fffd896068ce9448e7b6c60ad3 218 Gene3D G3DSA:1.10.260.40 4 75 6.0E-9 T 14-10-2018 ABED_1145 5c3248fffd896068ce9448e7b6c60ad3 218 SUPERFAMILY SSF51306 88 213 1.26E-18 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABED_1145 5c3248fffd896068ce9448e7b6c60ad3 218 ProSitePatterns PS00501 Signal peptidases I serine active site. 136 143 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 ABED_1145 5c3248fffd896068ce9448e7b6c60ad3 218 Pfam PF00717 Peptidase S24-like 134 201 7.2E-11 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Pfam PF00702 haloacid dehalogenase-like hydrolase 438 655 9.0E-44 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 777 837 3.9E-16 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 4 67 2.1E-12 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 566 577 1.6E-28 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 660 1.6E-28 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 676 1.6E-28 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 292 306 1.6E-28 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 588 598 1.6E-28 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 442 456 1.6E-28 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Pfam PF00403 Heavy-metal-associated domain 6 66 1.4E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Pfam PF00403 Heavy-metal-associated domain 777 836 5.4E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Gene3D G3DSA:3.30.70.100 773 837 1.4E-18 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 SUPERFAMILY SSF81653 245 342 3.01E-29 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Gene3D G3DSA:3.40.50.1000 423 692 8.2E-92 T 14-10-2018 IPR023214 HAD superfamily ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 SUPERFAMILY SSF56784 440 748 7.7E-55 T 14-10-2018 IPR036412 HAD-like superfamily ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 SUPERFAMILY SSF55008 3 73 1.96E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Gene3D G3DSA:2.70.150.20 235 347 2.4E-42 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 ProSitePatterns PS01047 Heavy-metal-associated domain. 779 808 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 215 723 5.4E-96 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 SUPERFAMILY SSF55008 770 838 1.83E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 SUPERFAMILY SSF81665 343 730 1.57E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Gene3D G3DSA:3.30.70.100 2 81 4.1E-20 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Gene3D G3DSA:3.40.1110.10 453 573 8.2E-92 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 166 750 3.0E-191 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 Pfam PF00122 E1-E2 ATPase 243 421 1.4E-59 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 444 450 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00943 Copper-transporting ATPase signature 365 379 2.5E-13 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00943 Copper-transporting ATPase signature 618 635 2.5E-13 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00943 Copper-transporting ATPase signature 232 250 2.5E-13 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00943 Copper-transporting ATPase signature 425 440 2.5E-13 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 PRINTS PR00943 Copper-transporting ATPase signature 47 67 2.5E-13 T 14-10-2018 ABED_0456 81b10d7985ee30f636b7e99c7c5ca4ec 839 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 204 751 5.6E-175 T 14-10-2018 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 Pfam PF13424 Tetratricopeptide repeat 317 392 4.4E-18 T 14-10-2018 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 Pfam PF13424 Tetratricopeptide repeat 237 309 2.8E-17 T 14-10-2018 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 SUPERFAMILY SSF48452 199 391 1.93E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 PRINTS PR00381 Kinesin light chain signature 250 268 1.5E-5 T 14-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 PRINTS PR00381 Kinesin light chain signature 359 379 1.5E-5 T 14-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 PRINTS PR00381 Kinesin light chain signature 394 415 1.5E-5 T 14-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 PRINTS PR00381 Kinesin light chain signature 315 332 1.5E-5 T 14-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 Gene3D G3DSA:1.25.40.10 312 453 5.9E-35 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 Gene3D G3DSA:1.25.40.10 137 311 1.4E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 SMART SM00028 319 352 0.68 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 SMART SM00028 193 226 68.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 SMART SM00028 277 310 0.0029 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 SMART SM00028 403 436 3.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 SMART SM00028 361 394 0.063 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 SMART SM00028 235 268 2.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0551 d3cc38d1291deefced6f6219a7d0cb54 475 Pfam PF13374 Tetratricopeptide repeat 196 233 3.2E-4 T 14-10-2018 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 234 248 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 Gene3D G3DSA:3.30.360.10 131 322 4.1E-123 T 14-10-2018 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 SMART SM00859 5 122 1.0E-45 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 339 7.4E-130 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 324 2.6E-52 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 120 5.9E-33 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 PIRSF PIRSF000148 3 342 4.3E-120 T 14-10-2018 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 SUPERFAMILY SSF51735 3 159 2.03E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 Gene3D G3DSA:3.40.50.720 6 334 4.1E-123 T 14-10-2018 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 SUPERFAMILY SSF55347 132 326 2.38E-70 T 14-10-2018 ABED_1618 8e03a28b24a56b2726a968f6539195f0 345 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 339 36.602 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 Pfam PF02040 Arsenical pump membrane protein 5 414 8.9E-138 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 2.0E-74 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 2.0E-74 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 PRINTS PR00758 Arsenical pump membrane protein signature 359 384 2.0E-74 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 PRINTS PR00758 Arsenical pump membrane protein signature 392 416 2.0E-74 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 2.0E-74 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 2.0E-74 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 2.0E-74 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1740 0d3ffd5ea3c40e60ec43f10b507faa4c 416 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 4 415 5.9E-161 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABED_1823 46c10a7bc7cee5734320ef8899c317bd 131 Pfam PF07366 SnoaL-like polyketide cyclase 7 130 1.7E-26 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 ABED_1823 46c10a7bc7cee5734320ef8899c317bd 131 SUPERFAMILY SSF54427 2 130 1.67E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily ABED_1823 46c10a7bc7cee5734320ef8899c317bd 131 Gene3D G3DSA:3.10.450.50 2 131 1.4E-30 T 14-10-2018 ABED_0724 e801b8113f7014430c1f39015d8f9c83 861 SMART SM00260 709 854 0.0018 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABED_0724 e801b8113f7014430c1f39015d8f9c83 861 Gene3D G3DSA:3.30.450.20 434 588 2.1E-9 T 14-10-2018 ABED_0724 e801b8113f7014430c1f39015d8f9c83 861 SUPERFAMILY SSF50341 706 855 1.57E-12 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABED_0724 e801b8113f7014430c1f39015d8f9c83 861 Pfam PF01584 CheW-like domain 714 853 7.8E-12 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABED_0724 e801b8113f7014430c1f39015d8f9c83 861 Gene3D G3DSA:2.30.30.40 716 848 2.4E-10 T 14-10-2018 ABED_0724 e801b8113f7014430c1f39015d8f9c83 861 Gene3D G3DSA:2.40.50.180 730 853 2.4E-10 T 14-10-2018 ABED_0833 967d391941308a4e507f02f9f2f04301 140 SUPERFAMILY SSF55486 25 137 3.09E-35 T 14-10-2018 ABED_0833 967d391941308a4e507f02f9f2f04301 140 Pfam PF02130 Uncharacterized protein family UPF0054 15 124 1.3E-34 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABED_0833 967d391941308a4e507f02f9f2f04301 140 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 101 111 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site ABED_0833 967d391941308a4e507f02f9f2f04301 140 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 133 21.361 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABED_0833 967d391941308a4e507f02f9f2f04301 140 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 28 124 6.2E-33 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABED_0833 967d391941308a4e507f02f9f2f04301 140 Gene3D G3DSA:3.40.390.30 5 135 6.0E-39 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 SUPERFAMILY SSF88659 464 538 7.41E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Gene3D G3DSA:1.10.10.10 541 626 1.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 415 428 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Pfam PF04542 Sigma-70 region 2 393 460 4.5E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Gene3D G3DSA:1.20.120.1810 276 460 1.4E-49 T 14-10-2018 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 585 611 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 8.3E-15 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 391 613 1.0E-40 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 SUPERFAMILY SSF88659 522 622 1.87E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 PRINTS PR00046 Major sigma-70 factor signature 600 611 2.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 PRINTS PR00046 Major sigma-70 factor signature 585 600 2.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 PRINTS PR00046 Major sigma-70 factor signature 415 428 2.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 PRINTS PR00046 Major sigma-70 factor signature 439 447 2.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 PRINTS PR00046 Major sigma-70 factor signature 563 575 2.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 1 625 35.542 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Pfam PF04539 Sigma-70 region 3 470 545 4.7E-25 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Gene3D G3DSA:1.10.601.10 101 253 1.1E-24 T 14-10-2018 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Gene3D G3DSA:1.10.10.10 464 539 1.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 388 624 2.4E-115 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 Pfam PF04545 Sigma-70, region 4 560 613 1.9E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABED_0957 7cd5cf2b3a5d9658790c6214ae5e647c 626 SUPERFAMILY SSF88946 120 458 2.98E-63 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 1.1E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 1.1E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 1.1E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 1.1E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 304 79.372 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 Gene3D G3DSA:3.40.50.1370 2 131 3.1E-119 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 3.3E-51 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 302 6.3E-120 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 SUPERFAMILY SSF53671 1 303 1.24E-100 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 7.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 7.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 7.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 7.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 7.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 301 1.6E-55 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ABED_1162 16c2ca8774f17c1a0647596a9566e239 309 Gene3D G3DSA:3.40.50.1370 132 299 3.1E-119 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABED_0150 f3030482eb1efbbbac816ef82b32b6c6 258 PIRSF PIRSF002859 194 258 4.6E-4 T 14-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 ABED_0150 f3030482eb1efbbbac816ef82b32b6c6 258 PIRSF PIRSF002859 4 199 2.6E-22 T 14-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 ABED_0150 f3030482eb1efbbbac816ef82b32b6c6 258 Pfam PF05818 Enterobacterial TraT complement resistance protein 25 258 1.1E-70 T 14-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 10 445 56.498 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 SUPERFAMILY SSF102114 140 365 4.84E-45 T 14-10-2018 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 Gene3D G3DSA:2.40.50.140 376 446 1.4E-7 T 14-10-2018 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 Gene3D G3DSA:3.80.30.20 142 375 5.9E-63 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 440 2.6E-100 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 148 168 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 12 434 1.5E-121 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 Pfam PF04055 Radical SAM superfamily 150 318 2.4E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 SMART SM00729 144 361 8.1E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 Pfam PF00919 Uncharacterized protein family UPF0004 12 106 1.4E-27 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ABED_0199 4fdc38e028466f18386c448d51a30d0e 446 Gene3D G3DSA:3.40.50.12160 11 140 6.1E-40 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 Gene3D G3DSA:3.40.140.20 372 510 2.1E-51 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 PIRSF PIRSF000414 1 510 1.0E-188 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 SUPERFAMILY SSF53927 204 510 1.0E-106 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 510 37.99 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 510 4.7E-163 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 SMART SM00851 12 126 6.1E-48 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 Pfam PF02142 MGS-like domain 12 125 2.8E-24 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 Gene3D G3DSA:3.40.50.1380 1 192 1.1E-80 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 131 441 5.0E-95 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 SUPERFAMILY SSF52335 2 190 4.45E-66 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 SMART SM00798 131 442 1.1E-137 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_1521 1c587d59f09209269c66c1b2ff1fab99 510 Gene3D G3DSA:3.40.140.20 199 352 1.5E-55 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_0304 04a2f3449239df1d8f71391f2983df2c 208 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 201 8.8E-26 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABED_0304 04a2f3449239df1d8f71391f2983df2c 208 Pfam PF03309 Type III pantothenate kinase 62 161 4.3E-10 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABED_0304 04a2f3449239df1d8f71391f2983df2c 208 SUPERFAMILY SSF53067 1 81 1.29E-23 T 14-10-2018 ABED_0304 04a2f3449239df1d8f71391f2983df2c 208 SUPERFAMILY SSF53067 83 204 1.75E-22 T 14-10-2018 ABED_0304 04a2f3449239df1d8f71391f2983df2c 208 Gene3D G3DSA:3.30.420.40 59 208 7.9E-45 T 14-10-2018 ABED_0304 04a2f3449239df1d8f71391f2983df2c 208 Gene3D G3DSA:3.30.420.40 1 56 1.2E-6 T 14-10-2018 ABED_1520 008aae961e707d87bce70dafab0de557 865 SUPERFAMILY SSF53850 24 258 1.27E-27 T 14-10-2018 ABED_1520 008aae961e707d87bce70dafab0de557 865 SUPERFAMILY SSF47384 630 706 7.26E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1520 008aae961e707d87bce70dafab0de557 865 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 747 862 1.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1520 008aae961e707d87bce70dafab0de557 865 Pfam PF09084 NMT1/THI5 like 36 243 2.9E-45 T 14-10-2018 IPR015168 SsuA/THI5-like ABED_1520 008aae961e707d87bce70dafab0de557 865 Gene3D G3DSA:3.30.565.10 705 863 3.2E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1520 008aae961e707d87bce70dafab0de557 865 SMART SM00062 336 555 1.6E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABED_1520 008aae961e707d87bce70dafab0de557 865 SUPERFAMILY SSF53850 337 553 1.18E-36 T 14-10-2018 ABED_1520 008aae961e707d87bce70dafab0de557 865 Gene3D G3DSA:3.40.190.10 106 206 4.2E-61 T 14-10-2018 ABED_1520 008aae961e707d87bce70dafab0de557 865 Gene3D G3DSA:3.40.190.10 421 514 4.0E-53 T 14-10-2018 ABED_1520 008aae961e707d87bce70dafab0de557 865 Gene3D G3DSA:1.10.287.130 623 704 2.1E-11 T 14-10-2018 ABED_1520 008aae961e707d87bce70dafab0de557 865 Gene3D G3DSA:3.40.190.10 327 551 4.0E-53 T 14-10-2018 ABED_1520 008aae961e707d87bce70dafab0de557 865 SUPERFAMILY SSF55874 704 843 5.24E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1520 008aae961e707d87bce70dafab0de557 865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 814 9.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1520 008aae961e707d87bce70dafab0de557 865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 786 800 9.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1520 008aae961e707d87bce70dafab0de557 865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 835 9.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1520 008aae961e707d87bce70dafab0de557 865 SMART SM00387 746 865 1.9E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1520 008aae961e707d87bce70dafab0de557 865 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 337 552 1.2E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABED_1520 008aae961e707d87bce70dafab0de557 865 Gene3D G3DSA:3.40.190.10 28 294 4.2E-61 T 14-10-2018 ABED_0952 4fced8e82450c18772ce7995388c5759 426 Gene3D G3DSA:3.40.640.10 70 317 1.1E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0952 4fced8e82450c18772ce7995388c5759 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 4 426 97.066 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ABED_0952 4fced8e82450c18772ce7995388c5759 426 Pfam PF00202 Aminotransferase class-III 35 393 2.2E-77 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_0952 4fced8e82450c18772ce7995388c5759 426 Gene3D G3DSA:3.90.1150.10 9 418 1.1E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0952 4fced8e82450c18772ce7995388c5759 426 SUPERFAMILY SSF53383 4 424 2.99E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0952 4fced8e82450c18772ce7995388c5759 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_0952 4fced8e82450c18772ce7995388c5759 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 1.3E-182 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ABED_1039 bd519e9dfc5ea34378871bec1c65b09a 222 Gene3D G3DSA:3.40.630.70 67 222 2.1E-61 T 14-10-2018 ABED_1039 bd519e9dfc5ea34378871bec1c65b09a 222 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 39 210 1.7E-68 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ABED_1039 bd519e9dfc5ea34378871bec1c65b09a 222 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 222 74.28 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ABED_1039 bd519e9dfc5ea34378871bec1c65b09a 222 Gene3D G3DSA:2.30.210.20 9 66 1.5E-17 T 14-10-2018 ABED_1039 bd519e9dfc5ea34378871bec1c65b09a 222 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 43 220 2.1E-58 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ABED_1039 bd519e9dfc5ea34378871bec1c65b09a 222 SUPERFAMILY SSF55729 11 220 3.55E-80 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0092 e0d33b87aaa1c9974a4c6f5e0fa113b2 225 SMART SM00862 149 224 7.9E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0092 e0d33b87aaa1c9974a4c6f5e0fa113b2 225 SUPERFAMILY SSF52172 2 133 1.99E-31 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0092 e0d33b87aaa1c9974a4c6f5e0fa113b2 225 Gene3D G3DSA:3.40.50.2300 1 125 2.5E-29 T 14-10-2018 ABED_0092 e0d33b87aaa1c9974a4c6f5e0fa113b2 225 Gene3D G3DSA:1.10.10.10 126 225 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0092 e0d33b87aaa1c9974a4c6f5e0fa113b2 225 Pfam PF00072 Response regulator receiver domain 7 118 1.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0092 e0d33b87aaa1c9974a4c6f5e0fa113b2 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 5.4E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0092 e0d33b87aaa1c9974a4c6f5e0fa113b2 225 SUPERFAMILY SSF46894 127 224 1.13E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_0092 e0d33b87aaa1c9974a4c6f5e0fa113b2 225 SMART SM00448 5 117 3.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0210 3a84926e7c6bbbe322ba8378292d508e 113 Gene3D G3DSA:3.40.30.10 1 113 8.7E-34 T 14-10-2018 ABED_0210 3a84926e7c6bbbe322ba8378292d508e 113 Pfam PF03960 ArsC family 38 111 2.6E-12 T 14-10-2018 IPR006660 Arsenate reductase-like ABED_0210 3a84926e7c6bbbe322ba8378292d508e 113 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 111 4.0E-25 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR ABED_0210 3a84926e7c6bbbe322ba8378292d508e 113 SUPERFAMILY SSF52833 1 112 1.37E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 Gene3D G3DSA:3.40.50.300 1 213 2.0E-80 T 14-10-2018 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 SUPERFAMILY SSF52540 4 208 3.59E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 Hamap MF_00235 Adenylate kinase [adk]. 1 213 51.173 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 PRINTS PR00094 Adenylate kinase signature 160 175 3.3E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 PRINTS PR00094 Adenylate kinase signature 32 46 3.3E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 PRINTS PR00094 Adenylate kinase signature 4 17 3.3E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 PRINTS PR00094 Adenylate kinase signature 177 191 3.3E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 PRINTS PR00094 Adenylate kinase signature 81 97 3.3E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 TIGRFAM TIGR01351 adk: adenylate kinase 2 211 1.6E-79 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 Pfam PF00406 Adenylate kinase 5 190 3.2E-58 T 14-10-2018 ABED_0726 8f686e5c023ac6d8812afb8617e08455 213 Pfam PF05191 Adenylate kinase, active site lid 127 162 1.0E-17 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 ABED_1054 01b922ead120dbe0c05f54128e8e80e9 347 Gene3D G3DSA:1.10.287.130 133 199 1.6E-7 T 14-10-2018 ABED_1054 01b922ead120dbe0c05f54128e8e80e9 347 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 198 5.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_1054 01b922ead120dbe0c05f54128e8e80e9 347 SMART SM00387 247 347 2.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1054 01b922ead120dbe0c05f54128e8e80e9 347 Gene3D G3DSA:3.30.565.10 204 347 4.0E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1054 01b922ead120dbe0c05f54128e8e80e9 347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 345 3.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1054 01b922ead120dbe0c05f54128e8e80e9 347 SUPERFAMILY SSF55874 208 346 8.12E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1054 01b922ead120dbe0c05f54128e8e80e9 347 SUPERFAMILY SSF47384 130 197 3.34E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1054 01b922ead120dbe0c05f54128e8e80e9 347 SMART SM00388 139 203 9.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 47 3.2E-17 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 SUPERFAMILY SSF54736 52 123 3.49E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 123 2.0E-20 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 Gene3D G3DSA:1.20.5.710 3 52 7.2E-18 T 14-10-2018 ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 23.658 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 SUPERFAMILY SSF48300 4 59 5.49E-16 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.9E-45 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 2.5E-28 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1706 f9f01a01b1ac975c48d321cb81c9ba98 123 Gene3D G3DSA:3.30.1390.10 53 123 2.1E-29 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABED_0322 1c2d9d3d67018b2ddd645a454345644d 496 Gene3D G3DSA:1.20.140.10 316 457 3.5E-193 T 14-10-2018 ABED_0322 1c2d9d3d67018b2ddd645a454345644d 496 SUPERFAMILY SSF48695 40 477 4.69E-158 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily ABED_0322 1c2d9d3d67018b2ddd645a454345644d 496 Pfam PF02335 Cytochrome c552 49 478 2.8E-173 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 ABED_0322 1c2d9d3d67018b2ddd645a454345644d 496 PIRSF PIRSF000243 1 486 1.3E-157 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 ABED_0322 1c2d9d3d67018b2ddd645a454345644d 496 Hamap MF_01182 Cytochrome c-552 [nrfA]. 2 483 53.177 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 ABED_0322 1c2d9d3d67018b2ddd645a454345644d 496 Gene3D G3DSA:1.10.1130.10 48 475 3.5E-193 T 14-10-2018 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 Gene3D G3DSA:3.20.20.60 3 334 5.0E-157 T 14-10-2018 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 Gene3D G3DSA:2.40.33.10 71 170 5.0E-157 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 Pfam PF00224 Pyruvate kinase, barrel domain 3 338 1.3E-118 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 Gene3D G3DSA:3.40.1380.20 335 464 5.0E-157 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 SUPERFAMILY SSF52935 323 467 2.88E-28 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 SUPERFAMILY SSF51621 2 342 3.11E-89 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 PRINTS PR01050 Pyruvate kinase family signature 216 242 4.2E-59 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 PRINTS PR01050 Pyruvate kinase family signature 312 328 4.2E-59 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 PRINTS PR01050 Pyruvate kinase family signature 293 311 4.2E-59 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 PRINTS PR01050 Pyruvate kinase family signature 268 292 4.2E-59 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 PRINTS PR01050 Pyruvate kinase family signature 60 76 4.2E-59 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 PRINTS PR01050 Pyruvate kinase family signature 243 267 4.2E-59 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 PRINTS PR01050 Pyruvate kinase family signature 188 202 4.2E-59 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 466 5.8E-143 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 466 1.0E-24 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABED_0241 8741f1c917333283bed9bb7cdc60e37e 491 SUPERFAMILY SSF50800 71 169 6.63E-20 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ABED_0236 2124f988993cf068556cecc3215c16e6 212 Pfam PF00484 Carbonic anhydrase 38 196 4.2E-52 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABED_0236 2124f988993cf068556cecc3215c16e6 212 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 87 107 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABED_0236 2124f988993cf068556cecc3215c16e6 212 SMART SM00947 30 201 6.3E-68 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABED_0236 2124f988993cf068556cecc3215c16e6 212 SUPERFAMILY SSF53056 3 207 1.83E-61 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ABED_0236 2124f988993cf068556cecc3215c16e6 212 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABED_0236 2124f988993cf068556cecc3215c16e6 212 Gene3D G3DSA:3.40.1050.10 1 209 2.6E-70 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ABED_1350 89d070197b746b8644d9ddacb50b2d0f 187 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 178 7.1E-55 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ABED_1350 89d070197b746b8644d9ddacb50b2d0f 187 Gene3D G3DSA:3.40.50.450 1 187 6.7E-67 T 14-10-2018 ABED_1350 89d070197b746b8644d9ddacb50b2d0f 187 Pfam PF03641 Possible lysine decarboxylase 45 175 3.6E-38 T 14-10-2018 IPR031100 LOG family ABED_1350 89d070197b746b8644d9ddacb50b2d0f 187 SUPERFAMILY SSF102405 1 178 1.53E-52 T 14-10-2018 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 233 1.3E-63 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 Hamap MF_00258 Glutamate racemase [murI]. 1 253 32.576 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 SUPERFAMILY SSF53681 108 232 5.4E-29 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 Gene3D G3DSA:3.40.50.1860 2 227 1.3E-72 T 14-10-2018 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 SUPERFAMILY SSF53681 2 105 9.15E-29 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 Gene3D G3DSA:3.40.50.1860 94 207 1.3E-72 T 14-10-2018 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 215 6.2E-30 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABED_0269 d73687adca0d576db35116fc5c47bb95 261 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 68 76 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABED_1161 b79b0dd9f6d5df7efd0a18b9b31dc0c8 704 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 689 4.6E-168 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 ABED_1161 b79b0dd9f6d5df7efd0a18b9b31dc0c8 704 SUPERFAMILY SSF51998 122 690 6.1E-143 T 14-10-2018 ABED_1161 b79b0dd9f6d5df7efd0a18b9b31dc0c8 704 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 690 2.3E-124 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 ABED_1161 b79b0dd9f6d5df7efd0a18b9b31dc0c8 704 Pfam PF03477 ATP cone domain 5 86 2.5E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ABED_0613 1e6ec3fa47abae23af74ceaf4aaa50a1 353 Gene3D G3DSA:3.30.413.10 255 353 3.3E-31 T 14-10-2018 ABED_0613 1e6ec3fa47abae23af74ceaf4aaa50a1 353 Gene3D G3DSA:3.20.20.20 1 254 3.3E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0613 1e6ec3fa47abae23af74ceaf4aaa50a1 353 SUPERFAMILY SSF51717 12 204 1.18E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_0613 1e6ec3fa47abae23af74ceaf4aaa50a1 353 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4 345 1.5E-121 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABED_0613 1e6ec3fa47abae23af74ceaf4aaa50a1 353 PIRSF PIRSF004640 1 353 1.1E-144 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABED_0613 1e6ec3fa47abae23af74ceaf4aaa50a1 353 SUPERFAMILY SSF56014 259 319 2.88E-7 T 14-10-2018 ABED_0613 1e6ec3fa47abae23af74ceaf4aaa50a1 353 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 2 351 33.647 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABED_0613 1e6ec3fa47abae23af74ceaf4aaa50a1 353 Pfam PF04551 GcpE protein 7 346 6.3E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABED_1053 7b211ef43b62ab234437ac69e82ef469 221 Gene3D G3DSA:1.10.10.10 127 221 5.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1053 7b211ef43b62ab234437ac69e82ef469 221 Pfam PF00072 Response regulator receiver domain 5 114 1.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1053 7b211ef43b62ab234437ac69e82ef469 221 Gene3D G3DSA:3.40.50.2300 1 126 2.4E-31 T 14-10-2018 ABED_1053 7b211ef43b62ab234437ac69e82ef469 221 SMART SM00862 147 218 1.6E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1053 7b211ef43b62ab234437ac69e82ef469 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 7.6E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1053 7b211ef43b62ab234437ac69e82ef469 221 SMART SM00448 3 114 5.1E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1053 7b211ef43b62ab234437ac69e82ef469 221 SUPERFAMILY SSF52172 4 171 1.76E-34 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 765 782 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 SMART SM00965 46 96 4.5E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 Gene3D G3DSA:3.55.50.30 24 94 1.5E-6 T 14-10-2018 ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 Pfam PF07660 Secretin and TonB N terminus short domain 48 94 6.6E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 SUPERFAMILY SSF56935 103 782 1.31E-95 T 14-10-2018 ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 238 1.8E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 139 782 1.3E-90 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 Gene3D G3DSA:2.40.170.20 249 782 3.3E-83 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1358 d5ce86971da6965fcd5c7ce230e322e9 782 Gene3D G3DSA:2.170.130.10 112 246 1.5E-24 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 1 366 41.809 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 SUPERFAMILY SSF53187 3 366 5.47E-53 T 14-10-2018 ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 SUPERFAMILY SSF55031 173 277 1.36E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 Pfam PF07687 Peptidase dimerisation domain 169 270 4.2E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 Gene3D G3DSA:3.40.630.10 6 355 3.4E-92 T 14-10-2018 ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 Pfam PF01546 Peptidase family M20/M25/M40 62 365 3.6E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 Gene3D G3DSA:3.30.70.360 173 284 3.4E-92 T 14-10-2018 ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 95 130 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ABED_1091 36dc64edd3d5e66ced97a69c2ff31f1d 366 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 4 366 2.1E-126 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ABED_0776 d6846fb00e6152295f61d68146dbda5d 238 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 103 109 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABED_0776 d6846fb00e6152295f61d68146dbda5d 238 SUPERFAMILY SSF53335 3 181 2.69E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0776 d6846fb00e6152295f61d68146dbda5d 238 Gene3D G3DSA:3.40.50.150 1 235 4.0E-42 T 14-10-2018 ABED_0776 d6846fb00e6152295f61d68146dbda5d 238 Pfam PF05175 Methyltransferase small domain 23 113 9.9E-14 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 Pfam PF01966 HD domain 458 559 5.4E-10 T 14-10-2018 IPR006674 HD domain ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 SUPERFAMILY SSF55021 779 836 1.83E-5 T 14-10-2018 ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 SUPERFAMILY SSF109604 424 548 1.57E-13 T 14-10-2018 ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 SUPERFAMILY SSF81301 57 179 2.32E-12 T 14-10-2018 ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 Gene3D G3DSA:1.10.3210.10 439 606 5.3E-9 T 14-10-2018 ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 Pfam PF08335 GlnD PII-uridylyltransferase 190 323 6.8E-21 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 PIRSF PIRSF006288 14 689 2.9E-115 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 PIRSF PIRSF006288 747 838 2.7E-6 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ABED_0179 804a8727b9907d2e2326fd5b00b950a4 843 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 843 64.452 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 SUPERFAMILY SSF53067 1 182 3.08E-61 T 14-10-2018 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 SUPERFAMILY SSF100934 501 600 4.97E-14 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 Gene3D G3DSA:3.90.640.10 223 310 1.2E-148 T 14-10-2018 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 Gene3D G3DSA:2.60.34.10 377 517 1.1E-64 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 Pfam PF00012 Hsp70 protein 4 600 4.9E-248 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 4.9E-285 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 Gene3D G3DSA:1.20.1270.10 518 603 2.0E-16 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 Gene3D G3DSA:3.30.420.40 5 373 1.2E-148 T 14-10-2018 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 SUPERFAMILY SSF100920 378 534 2.22E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 328 344 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 359 379 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 463 479 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 196 206 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 382 401 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 627 35.338 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 Gene3D G3DSA:3.30.420.40 179 360 1.2E-148 T 14-10-2018 ABED_1990 6074b419cf2b0835b4725f35f8f6510e 628 SUPERFAMILY SSF53067 185 376 2.72E-63 T 14-10-2018 ABED_0541 3a6838392f42b964650bfe903ed99811 199 Pfam PF01725 Ham1 family 3 191 3.4E-45 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ABED_0541 3a6838392f42b964650bfe903ed99811 199 SUPERFAMILY SSF52972 2 195 8.37E-54 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABED_0541 3a6838392f42b964650bfe903ed99811 199 Gene3D G3DSA:3.90.950.10 1 197 7.7E-59 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABED_0541 3a6838392f42b964650bfe903ed99811 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 197 41.647 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 ABED_1514 05db8947fb51280b9df892c6f014f637 164 Pfam PF01625 Peptide methionine sulfoxide reductase 8 158 5.5E-54 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABED_1514 05db8947fb51280b9df892c6f014f637 164 Gene3D G3DSA:3.30.1060.10 2 163 1.4E-58 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABED_1514 05db8947fb51280b9df892c6f014f637 164 SUPERFAMILY SSF55068 4 160 5.76E-62 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABED_1514 05db8947fb51280b9df892c6f014f637 164 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 6 162 32.984 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABED_1514 05db8947fb51280b9df892c6f014f637 164 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 151 7.0E-48 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABED_0128 2e8848194682ab808423281e6e702dc1 183 SUPERFAMILY SSF101874 20 179 2.09E-48 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0128 2e8848194682ab808423281e6e702dc1 183 Pfam PF04264 YceI-like domain 22 178 1.0E-44 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_0128 2e8848194682ab808423281e6e702dc1 183 SMART SM00867 21 180 1.3E-65 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_0128 2e8848194682ab808423281e6e702dc1 183 Gene3D G3DSA:2.40.128.110 21 181 2.1E-47 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0423 16fa3046bc666ea40f4da3e62174e975 151 Gene3D G3DSA:3.40.1280.10 1 151 1.5E-38 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABED_0423 16fa3046bc666ea40f4da3e62174e975 151 PIRSF PIRSF004505 1 151 1.2E-38 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABED_0423 16fa3046bc666ea40f4da3e62174e975 151 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 151 21.878 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABED_0423 16fa3046bc666ea40f4da3e62174e975 151 SUPERFAMILY SSF75217 1 150 1.26E-34 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases ABED_0423 16fa3046bc666ea40f4da3e62174e975 151 Pfam PF02590 Predicted SPOUT methyltransferase 1 150 1.4E-35 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABED_0425 5f32462a3fff78143237779d7995121f 309 Pfam PF01207 Dihydrouridine synthase (Dus) 12 302 3.3E-78 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABED_0425 5f32462a3fff78143237779d7995121f 309 PIRSF PIRSF006621 1 309 8.1E-87 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABED_0425 5f32462a3fff78143237779d7995121f 309 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABED_0425 5f32462a3fff78143237779d7995121f 309 Gene3D G3DSA:1.10.1200.80 246 309 4.9E-10 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 ABED_0425 5f32462a3fff78143237779d7995121f 309 Gene3D G3DSA:3.20.20.70 8 245 8.7E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0425 5f32462a3fff78143237779d7995121f 309 SUPERFAMILY SSF51395 10 309 4.39E-77 T 14-10-2018 ABED_1555 cca4412441f3ecffae482778f8c17100 194 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 14-10-2018 IPR018215 ClpP, Ser active site ABED_1555 cca4412441f3ecffae482778f8c17100 194 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 8.0E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABED_1555 cca4412441f3ecffae482778f8c17100 194 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 8.0E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABED_1555 cca4412441f3ecffae482778f8c17100 194 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 8.0E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABED_1555 cca4412441f3ecffae482778f8c17100 194 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 8.0E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABED_1555 cca4412441f3ecffae482778f8c17100 194 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 8.0E-53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABED_1555 cca4412441f3ecffae482778f8c17100 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 14-10-2018 IPR033135 ClpP, histidine active site ABED_1555 cca4412441f3ecffae482778f8c17100 194 Pfam PF00574 Clp protease 13 192 8.2E-87 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABED_1555 cca4412441f3ecffae482778f8c17100 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.226 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABED_1555 cca4412441f3ecffae482778f8c17100 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 1.5E-106 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABED_1555 cca4412441f3ecffae482778f8c17100 194 SUPERFAMILY SSF52096 11 192 2.74E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABED_1555 cca4412441f3ecffae482778f8c17100 194 Gene3D G3DSA:3.90.226.10 1 194 3.3E-82 T 14-10-2018 ABED_1975 035e14339648a1c7620d538f29d68e45 201 SUPERFAMILY SSF54001 55 129 7.36E-7 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_1975 035e14339648a1c7620d538f29d68e45 201 Gene3D G3DSA:3.10.620.30 46 186 4.1E-12 T 14-10-2018 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 3.8E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 3.8E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 3.8E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 3.8E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Gene3D G3DSA:3.40.50.300 349 548 2.4E-64 T 14-10-2018 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Gene3D G3DSA:3.40.50.300 554 766 2.9E-88 T 14-10-2018 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 SMART SM00382 200 344 8.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 SMART SM00382 601 743 3.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 761 1.4E-55 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 SUPERFAMILY SSF52540 550 846 1.08E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Gene3D G3DSA:1.10.8.60 767 859 2.4E-24 T 14-10-2018 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Gene3D G3DSA:3.40.50.300 160 348 1.0E-70 T 14-10-2018 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 846 1.4E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 SMART SM01086 767 856 4.7E-30 T 14-10-2018 IPR019489 Clp ATPase, C-terminal ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 317 1.9E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 SUPERFAMILY SSF52540 161 549 2.82E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 SUPERFAMILY SSF81923 7 157 5.89E-26 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Gene3D G3DSA:1.10.1780.10 1 159 2.2E-24 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 104 146 0.56 T 14-10-2018 IPR004176 Clp, N-terminal ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 22 67 3.9E-8 T 14-10-2018 IPR004176 Clp, N-terminal ABED_1509 a93b25162d9b8a70e4a37504da9e35d8 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 ABED_0088 f812f2402a5160f5705712ff7e4a7202 394 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 192 390 2.1E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_0088 f812f2402a5160f5705712ff7e4a7202 394 Gene3D G3DSA:1.10.3720.10 168 392 8.1E-31 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0088 f812f2402a5160f5705712ff7e4a7202 394 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 142 391 2.5E-64 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 ABED_0088 f812f2402a5160f5705712ff7e4a7202 394 Pfam PF11812 Domain of unknown function (DUF3333) 83 131 4.3E-6 T 14-10-2018 IPR024573 Domain of unknown function DUF3333 ABED_0088 f812f2402a5160f5705712ff7e4a7202 394 Pfam PF11812 Domain of unknown function (DUF3333) 17 80 6.1E-13 T 14-10-2018 IPR024573 Domain of unknown function DUF3333 ABED_0088 f812f2402a5160f5705712ff7e4a7202 394 SUPERFAMILY SSF161098 169 382 2.88E-32 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0343 b7d5eb3ef5cb032d30c685b1296dae40 305 SUPERFAMILY SSF47648 1 70 2.35E-12 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABED_0343 b7d5eb3ef5cb032d30c685b1296dae40 305 Pfam PF00591 Glycosyl transferase family, a/b domain 146 303 2.5E-6 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABED_0343 b7d5eb3ef5cb032d30c685b1296dae40 305 Gene3D G3DSA:1.20.970.10 1 71 1.1E-17 T 14-10-2018 ABED_0343 b7d5eb3ef5cb032d30c685b1296dae40 305 SUPERFAMILY SSF52418 131 303 1.96E-22 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABED_0343 b7d5eb3ef5cb032d30c685b1296dae40 305 Gene3D G3DSA:3.40.1030.10 120 305 6.3E-22 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABED_0343 b7d5eb3ef5cb032d30c685b1296dae40 305 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 68 2.3E-13 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABED_1203 4d883542edc545836b91eb7ce9d55a40 227 SUPERFAMILY SSF46894 127 225 2.24E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_1203 4d883542edc545836b91eb7ce9d55a40 227 SMART SM00862 149 225 1.2E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1203 4d883542edc545836b91eb7ce9d55a40 227 Gene3D G3DSA:3.40.50.2300 2 127 1.5E-29 T 14-10-2018 ABED_1203 4d883542edc545836b91eb7ce9d55a40 227 SUPERFAMILY SSF52172 5 119 2.7E-32 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1203 4d883542edc545836b91eb7ce9d55a40 227 Pfam PF00072 Response regulator receiver domain 5 114 4.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1203 4d883542edc545836b91eb7ce9d55a40 227 SMART SM00448 3 113 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1203 4d883542edc545836b91eb7ce9d55a40 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.1E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1203 4d883542edc545836b91eb7ce9d55a40 227 Gene3D G3DSA:1.10.10.10 128 227 4.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_2072 60212b921a671a3688fa6d76713935c9 179 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 175 7.4E-58 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 ABED_2072 60212b921a671a3688fa6d76713935c9 179 Pfam PF01965 DJ-1/PfpI family 3 162 2.8E-41 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABED_2072 60212b921a671a3688fa6d76713935c9 179 Gene3D G3DSA:3.40.50.880 1 179 1.3E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_2072 60212b921a671a3688fa6d76713935c9 179 SUPERFAMILY SSF52317 1 177 2.9E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0549 ec56460bd66fe79bbe0027f01904f324 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 1.7E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABED_0549 ec56460bd66fe79bbe0027f01904f324 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 1.7E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABED_0549 ec56460bd66fe79bbe0027f01904f324 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 1.7E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABED_0549 ec56460bd66fe79bbe0027f01904f324 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.7E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABED_0549 ec56460bd66fe79bbe0027f01904f324 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 5.0E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABED_0549 ec56460bd66fe79bbe0027f01904f324 152 SUPERFAMILY SSF52788 1 146 1.44E-40 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ABED_0549 ec56460bd66fe79bbe0027f01904f324 152 Gene3D G3DSA:3.40.50.2300 1 150 1.2E-45 T 14-10-2018 ABED_0549 ec56460bd66fe79bbe0027f01904f324 152 SMART SM00226 3 145 5.2E-41 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 136 778 1.7E-99 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 236 7.7E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 Gene3D G3DSA:2.40.170.20 246 778 2.8E-142 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 Gene3D G3DSA:3.55.50.30 20 113 1.2E-8 T 14-10-2018 ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 761 778 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 Gene3D G3DSA:2.170.130.10 114 245 6.1E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 SUPERFAMILY SSF56935 101 778 2.68E-122 T 14-10-2018 ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 Pfam PF00593 TonB dependent receptor 357 777 1.1E-50 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_2137 2cbf534d5eab5326f0eedcfd35b933db 778 SMART SM00965 46 96 8.1E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 SUPERFAMILY SSF52374 12 162 2.12E-40 T 14-10-2018 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 13 164 29.594 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 31 52 3.4E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 96 112 3.4E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 13 31 3.4E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 60 84 3.4E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 123 145 3.4E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 Pfam PF01467 Cytidylyltransferase-like 16 144 2.0E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 15 72 1.1E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 Gene3D G3DSA:3.40.50.620 5 164 8.7E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0913 cefee499559dcdb5aadc74a522fa2fb9 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 15 162 1.6E-55 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABED_1476 37fe5a09b456a5fd8e5e6327e567b986 243 Pfam PF13103 TonB C terminal 159 241 1.2E-16 T 14-10-2018 ABED_1476 37fe5a09b456a5fd8e5e6327e567b986 243 SUPERFAMILY SSF74653 143 241 4.71E-5 T 14-10-2018 ABED_2038 e0410169f428e6afd14b03633b57e01e 215 Gene3D G3DSA:1.25.40.10 33 213 1.9E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_2038 e0410169f428e6afd14b03633b57e01e 215 SUPERFAMILY SSF81901 58 173 2.62E-19 T 14-10-2018 ABED_2038 e0410169f428e6afd14b03633b57e01e 215 SMART SM00671 99 133 2.4 T 14-10-2018 IPR006597 Sel1-like repeat ABED_2038 e0410169f428e6afd14b03633b57e01e 215 SMART SM00671 67 98 17.0 T 14-10-2018 IPR006597 Sel1-like repeat ABED_2038 e0410169f428e6afd14b03633b57e01e 215 SMART SM00671 134 169 2.4E-4 T 14-10-2018 IPR006597 Sel1-like repeat ABED_2038 e0410169f428e6afd14b03633b57e01e 215 Pfam PF08238 Sel1 repeat 107 130 0.017 T 14-10-2018 IPR006597 Sel1-like repeat ABED_2038 e0410169f428e6afd14b03633b57e01e 215 Pfam PF08238 Sel1 repeat 68 97 2.2 T 14-10-2018 IPR006597 Sel1-like repeat ABED_2038 e0410169f428e6afd14b03633b57e01e 215 Pfam PF08238 Sel1 repeat 135 168 3.6E-4 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 12 174 3.6E-61 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 ProSitePatterns PS00938 Initiation factor 3 signature. 63 76 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 5 175 27.287 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 12 81 1.7E-29 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 Gene3D G3DSA:3.10.20.80 6 83 5.1E-31 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 88 173 4.9E-30 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 SUPERFAMILY SSF55200 87 174 1.12E-27 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 Gene3D G3DSA:3.30.110.10 84 175 2.1E-32 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ABED_0072 7a420fa40c6316681656447c9d19b7f8 175 SUPERFAMILY SSF54364 10 83 5.36E-27 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 462 1.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 1.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 1.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 476 1.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 SUPERFAMILY SSF55874 366 517 6.42E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 SMART SM01049 48 150 2.3E-12 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 Gene3D G3DSA:3.30.450.20 48 209 1.3E-33 T 14-10-2018 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 SUPERFAMILY SSF47384 293 361 1.9E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 517 4.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 SMART SM00387 407 519 5.3E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 Pfam PF17200 Single Cache domain 2 65 207 4.1E-26 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 Gene3D G3DSA:1.10.287.130 282 363 2.5E-9 T 14-10-2018 ABED_0337 16d0d96f3e0654d216e10d5ca4f26628 520 Gene3D G3DSA:3.30.565.10 367 519 1.3E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1107 51e7f04ea94bf8d18bb8b4f682b9a11c 209 Gene3D G3DSA:3.40.50.10090 29 132 1.1E-48 T 14-10-2018 ABED_1107 51e7f04ea94bf8d18bb8b4f682b9a11c 209 Gene3D G3DSA:3.40.50.10090 133 206 1.1E-48 T 14-10-2018 ABED_1107 51e7f04ea94bf8d18bb8b4f682b9a11c 209 Pfam PF02602 Uroporphyrinogen-III synthase HemD 28 186 2.0E-29 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_1107 51e7f04ea94bf8d18bb8b4f682b9a11c 209 SUPERFAMILY SSF69618 14 204 1.57E-33 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABED_1616 32e168f1d3a6db4e15e86d10788f7ff9 346 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 4 341 2.4E-115 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABED_1616 32e168f1d3a6db4e15e86d10788f7ff9 346 SUPERFAMILY SSF51726 3 344 2.27E-106 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABED_1616 32e168f1d3a6db4e15e86d10788f7ff9 346 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 5 340 3.8E-125 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABED_1616 32e168f1d3a6db4e15e86d10788f7ff9 346 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 18 27 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABED_1616 32e168f1d3a6db4e15e86d10788f7ff9 346 Gene3D G3DSA:3.20.20.210 1 346 2.2E-128 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABED_1616 32e168f1d3a6db4e15e86d10788f7ff9 346 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 2 343 46.533 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABED_1616 32e168f1d3a6db4e15e86d10788f7ff9 346 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 139 155 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 54 71 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 PIRSF PIRSF036643 15 604 4.5E-117 T 14-10-2018 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 PIRSF PIRSF036643 618 661 2.2 T 14-10-2018 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 PIRSF PIRSF036643 775 932 2.5E-12 T 14-10-2018 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 Pfam PF00384 Molybdopterin oxidoreductase 106 553 1.4E-62 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 SUPERFAMILY SSF53706 49 589 2.62E-190 T 14-10-2018 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 101 8.3E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 Pfam PF01568 Molydopterin dinucleotide binding domain 800 923 4.1E-14 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 SUPERFAMILY SSF50692 733 932 3.16E-29 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 Gene3D G3DSA:2.20.25.90 47 108 1.0E-10 T 14-10-2018 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 SMART SM00926 49 103 1.0E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 Gene3D G3DSA:3.40.228.10 183 383 3.0E-140 T 14-10-2018 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 Gene3D G3DSA:2.40.40.20 747 932 4.1E-31 T 14-10-2018 ABED_1409 e30f4e652a619d8eede5a65c45d0d87d 932 Gene3D G3DSA:3.40.50.740 115 601 3.0E-140 T 14-10-2018 ABED_0331 8a309933c0e2c5d57905ec3dc6e73237 268 SUPERFAMILY SSF54862 77 259 9.86E-22 T 14-10-2018 ABED_0331 8a309933c0e2c5d57905ec3dc6e73237 268 Gene3D G3DSA:3.30.70.20 204 260 1.6E-7 T 14-10-2018 ABED_0331 8a309933c0e2c5d57905ec3dc6e73237 268 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 7 260 1.5E-99 T 14-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family ABED_0331 8a309933c0e2c5d57905ec3dc6e73237 268 Pfam PF12801 4Fe-4S binding domain 66 110 6.3E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0331 8a309933c0e2c5d57905ec3dc6e73237 268 Pfam PF12801 4Fe-4S binding domain 162 200 3.6E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0331 8a309933c0e2c5d57905ec3dc6e73237 268 Pfam PF13237 4Fe-4S dicluster domain 204 252 1.3E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_2051 866a33a5e2950589d32d0557940687ae 349 Gene3D G3DSA:3.40.50.300 26 268 6.1E-83 T 14-10-2018 ABED_2051 866a33a5e2950589d32d0557940687ae 349 SUPERFAMILY SSF54752 269 327 1.28E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ABED_2051 866a33a5e2950589d32d0557940687ae 349 ProSitePatterns PS00321 recA signature. 214 222 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 ABED_2051 866a33a5e2950589d32d0557940687ae 349 SMART SM00382 57 229 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_2051 866a33a5e2950589d32d0557940687ae 349 Hamap MF_00268 Protein RecA [recA]. 5 330 51.235 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 324 1.1E-168 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 PRINTS PR00142 RecA protein signature 93 122 1.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 PRINTS PR00142 RecA protein signature 165 194 1.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 PRINTS PR00142 RecA protein signature 127 156 1.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 PRINTS PR00142 RecA protein signature 298 315 1.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 PRINTS PR00142 RecA protein signature 211 239 1.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 PRINTS PR00142 RecA protein signature 244 273 1.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 SUPERFAMILY SSF52540 5 268 7.89E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_2051 866a33a5e2950589d32d0557940687ae 349 Pfam PF00154 recA bacterial DNA recombination protein 7 269 2.8E-138 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABED_2051 866a33a5e2950589d32d0557940687ae 349 Gene3D G3DSA:3.30.250.10 269 345 4.8E-27 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ABED_1799 7fa132c736da75d0509159d89ebed0d6 253 SUPERFAMILY SSF53474 4 252 2.09E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_1799 7fa132c736da75d0509159d89ebed0d6 253 Pfam PF12146 Serine aminopeptidase, S33 13 240 2.0E-14 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 ABED_1799 7fa132c736da75d0509159d89ebed0d6 253 Gene3D G3DSA:3.40.50.1820 3 253 5.3E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_1783 90e14289c8f221f5d60262c84ee86611 450 Pfam PF00448 SRP54-type protein, GTPase domain 95 289 3.0E-71 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 SMART SM00963 1 79 2.6E-12 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 262 275 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 Gene3D G3DSA:3.40.50.300 83 278 1.5E-94 T 14-10-2018 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 423 4.4E-145 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 SUPERFAMILY SSF52540 89 291 8.06E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1783 90e14289c8f221f5d60262c84ee86611 450 Pfam PF02978 Signal peptide binding domain 321 420 1.4E-28 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 Gene3D G3DSA:1.10.260.30 305 430 9.9E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 SMART SM00382 93 294 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1783 90e14289c8f221f5d60262c84ee86611 450 SUPERFAMILY SSF47364 2 82 1.09E-10 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 SMART SM00962 94 289 1.3E-100 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 SUPERFAMILY SSF47446 291 424 1.44E-40 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 Gene3D G3DSA:1.20.120.140 6 299 1.5E-94 T 14-10-2018 ABED_1783 90e14289c8f221f5d60262c84ee86611 450 Pfam PF02881 SRP54-type protein, helical bundle domain 6 75 6.6E-8 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_1893 36f1775131f946564fae430258452c39 320 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 9 317 4.0E-92 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 ABED_1893 36f1775131f946564fae430258452c39 320 Pfam PF04055 Radical SAM superfamily 44 224 2.3E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_1893 36f1775131f946564fae430258452c39 320 SMART SM00729 24 270 3.0E-35 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_1893 36f1775131f946564fae430258452c39 320 SUPERFAMILY SSF102114 12 277 8.76E-44 T 14-10-2018 ABED_1893 36f1775131f946564fae430258452c39 320 Gene3D G3DSA:3.80.30.20 43 274 2.8E-14 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABED_1893 36f1775131f946564fae430258452c39 320 Pfam PF16199 Radical_SAM C-terminal domain 231 309 1.9E-19 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 ABED_0330 29cf7c3b9002a21e1281c05d2b31170b 201 Gene3D G3DSA:1.10.1130.10 70 132 9.5E-19 T 14-10-2018 ABED_0330 29cf7c3b9002a21e1281c05d2b31170b 201 SUPERFAMILY SSF48695 55 182 1.04E-22 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily ABED_0330 29cf7c3b9002a21e1281c05d2b31170b 201 PIRSF PIRSF006105 1 194 3.0E-40 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB ABED_0330 29cf7c3b9002a21e1281c05d2b31170b 201 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 146 178 2.4E-6 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB ABED_0330 29cf7c3b9002a21e1281c05d2b31170b 201 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 27 123 4.0E-22 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 SMART SM00729 142 364 2.3E-49 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 435 65.514 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 435 3.0E-160 T 14-10-2018 ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 Pfam PF04055 Radical SAM superfamily 146 320 4.6E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 Gene3D G3DSA:3.40.50.12160 5 140 2.2E-32 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 Gene3D G3DSA:3.80.30.20 141 378 3.8E-80 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 SUPERFAMILY SSF102114 138 368 1.96E-52 T 14-10-2018 ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 Pfam PF01938 TRAM domain 376 435 5.6E-15 T 14-10-2018 IPR002792 TRAM domain ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 Pfam PF00919 Uncharacterized protein family UPF0004 6 104 1.6E-28 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ABED_0230 195507bf6ecffa1abfbb6252f952bd47 436 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 432 9.2E-142 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 Gene3D G3DSA:3.40.1550.10 2 157 9.0E-8 T 14-10-2018 IPR028976 CheC-like superfamily ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 SUPERFAMILY SSF103039 4 154 4.71E-9 T 14-10-2018 IPR028976 CheC-like superfamily ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 207 277 8.4E-19 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 PRINTS PR00956 Flagellar motor switch protein FliN signature 253 268 9.3E-15 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 PRINTS PR00956 Flagellar motor switch protein FliN signature 224 240 9.3E-15 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 PRINTS PR00956 Flagellar motor switch protein FliN signature 240 253 9.3E-15 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 PRINTS PR00956 Flagellar motor switch protein FliN signature 207 223 9.3E-15 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 Gene3D G3DSA:2.30.330.10 194 286 8.7E-22 T 14-10-2018 IPR036429 SpoA-like superfamily ABED_1762 e239aeb4d81a093f107f57a66b01e846 288 SUPERFAMILY SSF101801 204 280 1.96E-18 T 14-10-2018 IPR036429 SpoA-like superfamily ABED_2068 4ffa2436ff54000f347afc7a198b9fc3 522 Pfam PF02272 DHHA1 domain 285 404 3.3E-22 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABED_2068 4ffa2436ff54000f347afc7a198b9fc3 522 Pfam PF01368 DHH family 54 199 7.4E-12 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABED_2068 4ffa2436ff54000f347afc7a198b9fc3 522 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 521 1.8E-156 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 ABED_2068 4ffa2436ff54000f347afc7a198b9fc3 522 Gene3D G3DSA:3.10.310.30 290 410 1.2E-32 T 14-10-2018 ABED_2068 4ffa2436ff54000f347afc7a198b9fc3 522 Gene3D G3DSA:3.90.1640.30 29 289 2.1E-81 T 14-10-2018 ABED_2068 4ffa2436ff54000f347afc7a198b9fc3 522 SUPERFAMILY SSF64182 29 411 1.57E-109 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily ABED_0202 66613eccfc777da55cafb8521ae234a4 118 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 5 111 5.0E-30 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ABED_0202 66613eccfc777da55cafb8521ae234a4 118 Gene3D G3DSA:3.90.470.20 1 114 5.9E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABED_0202 66613eccfc777da55cafb8521ae234a4 118 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1 111 1.6E-20 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABED_0202 66613eccfc777da55cafb8521ae234a4 118 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 112 2.9E-35 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ABED_0202 66613eccfc777da55cafb8521ae234a4 118 SUPERFAMILY SSF56214 2 112 4.19E-27 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABED_0202 66613eccfc777da55cafb8521ae234a4 118 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 112 2.3E-26 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ABED_0202 66613eccfc777da55cafb8521ae234a4 118 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 115 18.431 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 SUPERFAMILY SSF47384 112 186 2.16E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 Gene3D G3DSA:1.20.120.620 10 110 6.9E-15 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 335 3.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 3.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 3.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 Pfam PF00512 His Kinase A (phospho-acceptor) domain 120 184 2.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 SMART SM00388 119 186 5.8E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 Pfam PF13493 Domain of unknown function (DUF4118) 15 118 2.2E-18 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 Gene3D G3DSA:3.30.565.10 189 340 1.2E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 SUPERFAMILY SSF55874 176 336 1.24E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 229 325 1.0E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 Gene3D G3DSA:1.10.287.130 111 188 5.3E-14 T 14-10-2018 ABED_1204 3114c52e1a2066ce731a8dfa1846ede5 342 SMART SM00387 229 338 3.8E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0418 bfbdc63805e158f6d865894162986fdc 257 Gene3D G3DSA:3.30.540.10 1 134 3.3E-40 T 14-10-2018 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 124 147 2.3E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 2.3E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 33 53 2.3E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 55 71 2.3E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 75 91 2.3E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 2.3E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 Gene3D G3DSA:3.40.190.80 137 256 3.6E-37 T 14-10-2018 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00378 Lithium-sensitive myo-inositol monophosphatase family signature 233 255 4.6E-9 T 14-10-2018 IPR020552 Inositol monophosphatase, lithium-sensitive GO:0046854 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363|Reactome: R-HSA-1855183 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00378 Lithium-sensitive myo-inositol monophosphatase family signature 126 144 4.6E-9 T 14-10-2018 IPR020552 Inositol monophosphatase, lithium-sensitive GO:0046854 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363|Reactome: R-HSA-1855183 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 PRINTS PR00378 Lithium-sensitive myo-inositol monophosphatase family signature 12 31 4.6E-9 T 14-10-2018 IPR020552 Inositol monophosphatase, lithium-sensitive GO:0046854 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363|Reactome: R-HSA-1855183 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 SUPERFAMILY SSF56655 5 255 7.2E-73 T 14-10-2018 ABED_0418 bfbdc63805e158f6d865894162986fdc 257 Pfam PF00459 Inositol monophosphatase family 6 255 4.4E-62 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 ProSitePatterns PS00605 ATP synthase c subunit signature. 62 83 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 SUPERFAMILY SSF81333 27 101 6.41E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 PRINTS PR00124 ATP synthase C subunit signature 34 53 3.2E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 PRINTS PR00124 ATP synthase C subunit signature 55 70 3.2E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 PRINTS PR00124 ATP synthase C subunit signature 72 97 3.2E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 42 99 7.5E-13 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 Hamap MF_01396 ATP synthase subunit c [atpH]. 32 97 15.581 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 Gene3D G3DSA:1.20.20.10 26 103 5.1E-23 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1589 fd47991ee63722a2aafcf72a8451661f 104 Pfam PF00137 ATP synthase subunit C 34 95 1.4E-14 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ABED_1658 6d3c40c85dc57ae61e811fdf27c054aa 249 Pfam PF00459 Inositol monophosphatase family 71 133 1.8E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABED_1658 6d3c40c85dc57ae61e811fdf27c054aa 249 Gene3D G3DSA:3.30.540.10 4 137 2.9E-19 T 14-10-2018 ABED_1658 6d3c40c85dc57ae61e811fdf27c054aa 249 SUPERFAMILY SSF56655 10 219 4.19E-25 T 14-10-2018 ABED_0146 6a2f0767db1c6e86e2d56322301a88a1 229 Pfam PF00588 SpoU rRNA Methylase family 84 225 4.5E-32 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABED_0146 6a2f0767db1c6e86e2d56322301a88a1 229 SUPERFAMILY SSF55315 1 68 2.82E-10 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like ABED_0146 6a2f0767db1c6e86e2d56322301a88a1 229 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 73 6.3E-13 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ABED_0146 6a2f0767db1c6e86e2d56322301a88a1 229 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 229 1.2E-53 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 ABED_0146 6a2f0767db1c6e86e2d56322301a88a1 229 Gene3D G3DSA:3.30.1330.30 1 69 1.3E-5 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like ABED_0146 6a2f0767db1c6e86e2d56322301a88a1 229 SUPERFAMILY SSF75217 62 228 1.83E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases ABED_0146 6a2f0767db1c6e86e2d56322301a88a1 229 SMART SM00967 2 74 1.5E-14 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ABED_0146 6a2f0767db1c6e86e2d56322301a88a1 229 Gene3D G3DSA:3.40.1280.10 76 229 1.9E-40 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABED_2010 4df2c4e7e9f15143bac3474ef11edb56 580 Pfam PF07510 Protein of unknown function (DUF1524) 431 574 1.8E-23 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 ABED_2010 4df2c4e7e9f15143bac3474ef11edb56 580 Pfam PF03235 Protein of unknown function DUF262 14 233 2.7E-36 T 14-10-2018 IPR004919 Domain of unknown function DUF262 ABED_0075 959c047f1218bc51d37f9c1371d33234 398 Gene3D G3DSA:3.40.250.10 155 282 8.5E-20 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_0075 959c047f1218bc51d37f9c1371d33234 398 Gene3D G3DSA:3.40.250.10 300 377 4.4E-14 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_0075 959c047f1218bc51d37f9c1371d33234 398 SUPERFAMILY SSF52821 287 370 1.44E-15 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_0075 959c047f1218bc51d37f9c1371d33234 398 SUPERFAMILY SSF52821 158 255 3.93E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_0075 959c047f1218bc51d37f9c1371d33234 398 SMART SM00450 288 387 1.3E-5 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_0075 959c047f1218bc51d37f9c1371d33234 398 SMART SM00450 51 151 6.7E-16 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_0075 959c047f1218bc51d37f9c1371d33234 398 SMART SM00450 153 252 2.6E-12 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_0075 959c047f1218bc51d37f9c1371d33234 398 SUPERFAMILY SSF52821 62 150 7.46E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_0075 959c047f1218bc51d37f9c1371d33234 398 Gene3D G3DSA:3.40.250.10 31 153 1.4E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_0075 959c047f1218bc51d37f9c1371d33234 398 Pfam PF00581 Rhodanese-like domain 64 147 1.0E-11 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_0075 959c047f1218bc51d37f9c1371d33234 398 Pfam PF00581 Rhodanese-like domain 163 248 4.6E-13 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_0075 959c047f1218bc51d37f9c1371d33234 398 Pfam PF00581 Rhodanese-like domain 291 377 7.6E-9 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_1663 b2d89bc8e8e7ab76dc67ba1080d3274b 794 Gene3D G3DSA:1.10.287.950 445 742 2.2E-58 T 14-10-2018 ABED_1663 b2d89bc8e8e7ab76dc67ba1080d3274b 794 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 557 711 2.1E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1663 b2d89bc8e8e7ab76dc67ba1080d3274b 794 Gene3D G3DSA:3.30.450.20 60 311 3.0E-48 T 14-10-2018 ABED_1663 b2d89bc8e8e7ab76dc67ba1080d3274b 794 Pfam PF02743 Cache domain 36 303 3.2E-25 T 14-10-2018 IPR033479 Double Cache domain 1 ABED_1663 b2d89bc8e8e7ab76dc67ba1080d3274b 794 SUPERFAMILY SSF58104 518 736 2.62E-54 T 14-10-2018 ABED_1663 b2d89bc8e8e7ab76dc67ba1080d3274b 794 SMART SM00283 498 747 7.8E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1663 b2d89bc8e8e7ab76dc67ba1080d3274b 794 Gene3D G3DSA:3.30.450.20 66 207 3.0E-48 T 14-10-2018 ABED_0974 554b02371663f6d28b1e3f4bb7eabaaa 599 Gene3D G3DSA:1.20.1600.10 51 494 1.7E-48 T 14-10-2018 ABED_0974 554b02371663f6d28b1e3f4bb7eabaaa 599 Pfam PF02321 Outer membrane efflux protein 290 463 3.4E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0974 554b02371663f6d28b1e3f4bb7eabaaa 599 Pfam PF02321 Outer membrane efflux protein 58 264 1.2E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0974 554b02371663f6d28b1e3f4bb7eabaaa 599 SUPERFAMILY SSF56954 5 472 2.75E-58 T 14-10-2018 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 SUPERFAMILY SSF50249 67 130 3.26E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 Gene3D G3DSA:2.30.30.30 2 63 1.8E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 TIGRFAM TIGR00038 efp: translation elongation factor P 5 185 2.2E-68 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 Hamap MF_00141 Elongation factor P [efp]. 2 185 45.071 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 SMART SM01185 68 122 3.4E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 3.6E-18 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 SMART SM00841 130 184 1.8E-27 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 Gene3D G3DSA:2.40.50.140 65 128 9.5E-21 T 14-10-2018 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 Pfam PF09285 Elongation factor P, C-terminal 130 184 2.1E-21 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 SUPERFAMILY SSF50249 130 185 1.66E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 60 1.9E-25 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 SUPERFAMILY SSF50104 3 64 3.81E-21 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 PIRSF PIRSF005901 1 186 2.0E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP ABED_1854 ebc3845ee8aeafa4d11c8ef4e9cf898e 186 Gene3D G3DSA:2.40.50.140 129 186 4.5E-22 T 14-10-2018 ABED_0095 35c89be2070d1f4aaa010482c3a5752f 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 27.737 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid ABED_0095 35c89be2070d1f4aaa010482c3a5752f 129 Gene3D G3DSA:3.30.230.10 1 129 1.1E-45 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_0095 35c89be2070d1f4aaa010482c3a5752f 129 SUPERFAMILY SSF54211 4 129 1.1E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_0095 35c89be2070d1f4aaa010482c3a5752f 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 ABED_0095 35c89be2070d1f4aaa010482c3a5752f 129 Pfam PF00380 Ribosomal protein S9/S16 8 129 1.5E-41 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 ABED_1166 e2089dcabbd8b0535fd96210e850c935 254 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 3 248 47.232 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 ABED_1166 e2089dcabbd8b0535fd96210e850c935 254 SUPERFAMILY SSF52402 3 247 7.96E-70 T 14-10-2018 ABED_1166 e2089dcabbd8b0535fd96210e850c935 254 Pfam PF02540 NAD synthase 9 245 3.1E-82 T 14-10-2018 IPR022310 NAD/GMP synthase ABED_1166 e2089dcabbd8b0535fd96210e850c935 254 TIGRFAM TIGR00552 nadE: NAD+ synthetase 5 247 4.5E-78 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 ABED_1166 e2089dcabbd8b0535fd96210e850c935 254 Gene3D G3DSA:3.40.50.620 1 250 1.2E-81 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0780 66b02abc36330588bfac0113bab42b9b 193 Gene3D G3DSA:3.40.920.10 4 192 3.2E-54 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ABED_0780 66b02abc36330588bfac0113bab42b9b 193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 179 2.3E-25 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ABED_0780 66b02abc36330588bfac0113bab42b9b 193 SUPERFAMILY SSF53323 8 185 4.18E-32 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ABED_1891 7f1736c0b0b59997680881f3cce5ca0a 684 Pfam PF13361 UvrD-like helicase C-terminal domain 271 601 6.4E-68 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABED_1891 7f1736c0b0b59997680881f3cce5ca0a 684 Gene3D G3DSA:3.40.50.300 9 266 7.0E-90 T 14-10-2018 ABED_1891 7f1736c0b0b59997680881f3cce5ca0a 684 Gene3D G3DSA:3.40.50.300 274 619 7.2E-99 T 14-10-2018 ABED_1891 7f1736c0b0b59997680881f3cce5ca0a 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 124 7.6E-26 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABED_1891 7f1736c0b0b59997680881f3cce5ca0a 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 134 265 1.7E-44 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABED_1891 7f1736c0b0b59997680881f3cce5ca0a 684 Gene3D G3DSA:1.10.10.160 111 183 7.0E-90 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily ABED_1891 7f1736c0b0b59997680881f3cce5ca0a 684 Gene3D G3DSA:1.10.486.10 376 538 7.2E-99 T 14-10-2018 ABED_1891 7f1736c0b0b59997680881f3cce5ca0a 684 SUPERFAMILY SSF52540 3 621 2.49E-146 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 12 406 2.2E-120 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 Gene3D G3DSA:3.40.50.12160 9 136 9.9E-20 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 SMART SM00729 140 357 7.7E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 Gene3D G3DSA:3.80.30.20 138 366 1.1E-63 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 416 1.7E-109 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 Pfam PF04055 Radical SAM superfamily 145 308 1.3E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 SUPERFAMILY SSF102114 136 363 1.96E-49 T 14-10-2018 ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 Pfam PF00919 Uncharacterized protein family UPF0004 9 102 2.9E-21 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ABED_1072 78908f04e146136fdd8eb20dc9aefc1f 422 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABED_1002 6410cace1130e213f81299cafd39cd2a 340 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 13 335 8.2E-89 T 14-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 ABED_1002 6410cace1130e213f81299cafd39cd2a 340 Pfam PF03601 Conserved hypothetical protein 698 14 320 4.6E-90 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ABED_1781 5899bd1bfbd9d16b47ef5e3b20c98b0e 79 Pfam PF13083 KH domain 4 76 1.1E-18 T 14-10-2018 ABED_1781 5899bd1bfbd9d16b47ef5e3b20c98b0e 79 SUPERFAMILY SSF54814 8 61 1.24E-5 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABED_1781 5899bd1bfbd9d16b47ef5e3b20c98b0e 79 Gene3D G3DSA:3.30.300.20 13 78 4.5E-7 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta ABED_1801 9ad683c73279465511498549267aaf1d 687 Pfam PF00593 TonB dependent receptor 264 681 6.4E-48 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_1801 9ad683c73279465511498549267aaf1d 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 149 8.9E-26 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1801 9ad683c73279465511498549267aaf1d 687 Gene3D G3DSA:2.170.130.10 21 154 2.8E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_1801 9ad683c73279465511498549267aaf1d 687 SUPERFAMILY SSF56935 25 687 3.05E-112 T 14-10-2018 ABED_1801 9ad683c73279465511498549267aaf1d 687 Gene3D G3DSA:2.40.170.20 158 687 3.7E-73 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1968 57e99e064daff8bb7d3ec0e57e30c163 234 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 38 231 3.3E-81 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 ABED_1968 57e99e064daff8bb7d3ec0e57e30c163 234 Gene3D G3DSA:3.40.50.620 1 234 5.3E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1968 57e99e064daff8bb7d3ec0e57e30c163 234 SUPERFAMILY SSF52402 7 195 4.19E-50 T 14-10-2018 ABED_1968 57e99e064daff8bb7d3ec0e57e30c163 234 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 33 207 2.5E-48 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ABED_1968 57e99e064daff8bb7d3ec0e57e30c163 234 PIRSF PIRSF000857 1 234 2.7E-89 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ABED_1968 57e99e064daff8bb7d3ec0e57e30c163 234 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 21 233 1.6E-55 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ABED_0105 e45fccea41b10f076c2af4df4d32a5d7 249 SUPERFAMILY SSF53335 45 200 2.01E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0105 e45fccea41b10f076c2af4df4d32a5d7 249 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 122 221 3.7E-20 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 ABED_0105 e45fccea41b10f076c2af4df4d32a5d7 249 Gene3D G3DSA:3.40.50.150 5 244 3.6E-53 T 14-10-2018 ABED_0369 a3707daba4d390674acabd1fecfdb08b 87 SMART SM01323 3 85 7.1E-39 T 14-10-2018 IPR003849 Preprotein translocase YajC ABED_0369 a3707daba4d390674acabd1fecfdb08b 87 Pfam PF02699 Preprotein translocase subunit 7 83 4.6E-28 T 14-10-2018 IPR003849 Preprotein translocase YajC ABED_0369 a3707daba4d390674acabd1fecfdb08b 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 2.0E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC ABED_0369 a3707daba4d390674acabd1fecfdb08b 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 25 43 2.0E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC ABED_0369 a3707daba4d390674acabd1fecfdb08b 87 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 4 85 2.7E-31 T 14-10-2018 IPR003849 Preprotein translocase YajC ABED_0870 05c349afe860ac3e2f3d9cfdc55107e6 483 SUPERFAMILY SSF56425 216 330 4.78E-31 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0870 05c349afe860ac3e2f3d9cfdc55107e6 483 Gene3D G3DSA:3.50.50.60 4 380 2.3E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0870 05c349afe860ac3e2f3d9cfdc55107e6 483 Gene3D G3DSA:3.90.700.10 226 325 2.3E-109 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0870 05c349afe860ac3e2f3d9cfdc55107e6 483 Pfam PF00890 FAD binding domain 4 371 6.0E-67 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0870 05c349afe860ac3e2f3d9cfdc55107e6 483 Gene3D G3DSA:1.20.58.100 396 483 2.8E-10 T 14-10-2018 ABED_0870 05c349afe860ac3e2f3d9cfdc55107e6 483 SUPERFAMILY SSF46977 413 479 4.71E-11 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0870 05c349afe860ac3e2f3d9cfdc55107e6 483 SUPERFAMILY SSF51905 3 394 1.81E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 Hamap MF_00335 Ribonuclease Y [rny]. 3 514 22.328 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 SMART SM00322 200 269 3.7E-5 T 14-10-2018 IPR004087 K Homology domain GO:0003676 ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 Gene3D G3DSA:1.10.3210.10 301 450 3.4E-16 T 14-10-2018 ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 6 514 2.3E-172 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 SMART SM00471 326 432 1.5E-11 T 14-10-2018 IPR003607 HD/PDEase domain ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 Pfam PF00013 KH domain 215 265 8.6E-6 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 SUPERFAMILY SSF109604 309 465 3.59E-28 T 14-10-2018 ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 TIGRFAM TIGR00277 HDIG: HDIG domain 326 403 1.8E-21 T 14-10-2018 IPR006675 HDIG domain ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 Gene3D G3DSA:3.30.1370.10 203 296 8.2E-8 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 Pfam PF12072 Domain of unknown function (DUF3552) 24 198 4.3E-13 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 SUPERFAMILY SSF54791 207 298 3.26E-13 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABED_0844 b8c9428de6a7b152e4c38647499b0f86 514 Pfam PF01966 HD domain 332 422 2.0E-16 T 14-10-2018 IPR006674 HD domain ABED_0618 5dcb8145aa35ade0f022956b061fc5af 378 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 28 376 1.1E-89 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABED_0618 5dcb8145aa35ade0f022956b061fc5af 378 PIRSF PIRSF000390 13 376 1.2E-91 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABED_0618 5dcb8145aa35ade0f022956b061fc5af 378 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 18 375 2.9E-173 T 14-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family ABED_0618 5dcb8145aa35ade0f022956b061fc5af 378 Gene3D G3DSA:3.90.1150.10 275 378 1.1E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0618 5dcb8145aa35ade0f022956b061fc5af 378 SUPERFAMILY SSF53383 17 375 1.24E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0618 5dcb8145aa35ade0f022956b061fc5af 378 Gene3D G3DSA:3.40.640.10 1 274 5.2E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0759 b74878d2d814385a7f9c35331aba77f1 235 SUPERFAMILY SSF52172 1 114 2.85E-28 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0759 b74878d2d814385a7f9c35331aba77f1 235 Gene3D G3DSA:2.40.50.40 126 193 1.0E-14 T 14-10-2018 ABED_0759 b74878d2d814385a7f9c35331aba77f1 235 Pfam PF04397 LytTr DNA-binding domain 133 230 8.2E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABED_0759 b74878d2d814385a7f9c35331aba77f1 235 Gene3D G3DSA:3.40.50.2300 1 125 1.1E-31 T 14-10-2018 ABED_0759 b74878d2d814385a7f9c35331aba77f1 235 SMART SM00448 1 111 5.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0759 b74878d2d814385a7f9c35331aba77f1 235 Pfam PF00072 Response regulator receiver domain 3 111 2.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0759 b74878d2d814385a7f9c35331aba77f1 235 SMART SM00850 133 231 5.5E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABED_0823 cb82e9268d58e3fb45f2d3f17ff91288 352 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 7 185 2.4E-52 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 ABED_0823 cb82e9268d58e3fb45f2d3f17ff91288 352 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 125 349 1.0E-43 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 ABED_0823 cb82e9268d58e3fb45f2d3f17ff91288 352 SMART SM00228 110 179 5.4E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 ABED_0823 cb82e9268d58e3fb45f2d3f17ff91288 352 SUPERFAMILY SSF50156 83 187 3.81E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 ABED_0823 cb82e9268d58e3fb45f2d3f17ff91288 352 Pfam PF02163 Peptidase family M50 5 333 7.1E-76 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 ABED_0823 cb82e9268d58e3fb45f2d3f17ff91288 352 Gene3D G3DSA:2.30.42.10 123 216 1.7E-13 T 14-10-2018 ABED_0823 cb82e9268d58e3fb45f2d3f17ff91288 352 Pfam PF13180 PDZ domain 124 179 2.6E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 ABED_1450 0c1eade1d33e472f1bbeb86ee4d6112d 155 SUPERFAMILY SSF55826 2 153 6.41E-39 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABED_1450 0c1eade1d33e472f1bbeb86ee4d6112d 155 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 154 8.5E-54 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ABED_1450 0c1eade1d33e472f1bbeb86ee4d6112d 155 Gene3D G3DSA:3.90.960.10 1 155 1.9E-55 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABED_1450 0c1eade1d33e472f1bbeb86ee4d6112d 155 PIRSF PIRSF006181 1 155 6.4E-53 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ABED_1450 0c1eade1d33e472f1bbeb86ee4d6112d 155 Pfam PF04073 Aminoacyl-tRNA editing domain 32 143 5.1E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 Gene3D G3DSA:3.30.70.120 1 112 8.1E-46 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABED_1093 1790fdf59550279f444ed5401f7cac78 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 PIRSF PIRSF039144 1 112 4.2E-54 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 SUPERFAMILY SSF54913 1 112 8.26E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ABED_1093 1790fdf59550279f444ed5401f7cac78 112 SMART SM00938 4 105 1.7E-62 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 PRINTS PR00340 P-II protein signature 52 75 3.6E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 PRINTS PR00340 P-II protein signature 2 17 3.6E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 PRINTS PR00340 P-II protein signature 83 103 3.6E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 PRINTS PR00340 P-II protein signature 23 41 3.6E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_1093 1790fdf59550279f444ed5401f7cac78 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 9.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_1790 fc18e4c3c523dc328126a1de7364e2fc 164 Pfam PF00731 AIR carboxylase 4 146 8.5E-55 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABED_1790 fc18e4c3c523dc328126a1de7364e2fc 164 SUPERFAMILY SSF52255 3 159 1.31E-57 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ABED_1790 fc18e4c3c523dc328126a1de7364e2fc 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 4.9E-56 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABED_1790 fc18e4c3c523dc328126a1de7364e2fc 164 PIRSF PIRSF001338 1 163 5.5E-61 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 ABED_1790 fc18e4c3c523dc328126a1de7364e2fc 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 29.365 T 14-10-2018 IPR033747 Class I PurE ABED_1790 fc18e4c3c523dc328126a1de7364e2fc 164 Gene3D G3DSA:3.40.50.7700 1 162 3.9E-61 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ABED_1790 fc18e4c3c523dc328126a1de7364e2fc 164 SMART SM01001 2 153 8.7E-85 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 Pfam PF03486 HI0933-like protein 6 408 6.5E-113 T 14-10-2018 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 Gene3D G3DSA:3.50.50.60 8 407 2.7E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1317 e3a3b895156d079049e93d11fed5866b 412 Gene3D G3DSA:2.40.30.10 192 355 2.7E-110 T 14-10-2018 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 Gene3D G3DSA:1.10.8.260 274 338 2.7E-110 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily ABED_1317 e3a3b895156d079049e93d11fed5866b 412 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 8.3E-5 T 14-10-2018 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.3E-5 T 14-10-2018 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 SUPERFAMILY SSF51905 5 408 7.24E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1317 e3a3b895156d079049e93d11fed5866b 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.5E-7 T 14-10-2018 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 363 385 1.5E-7 T 14-10-2018 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-7 T 14-10-2018 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 SUPERFAMILY SSF160996 193 356 2.22E-26 T 14-10-2018 ABED_1317 e3a3b895156d079049e93d11fed5866b 412 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 408 1.1E-139 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 Pfam PF12796 Ankyrin repeats (3 copies) 481 561 8.1E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 Pfam PF12796 Ankyrin repeats (3 copies) 27 106 2.0E-8 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 Pfam PF12796 Ankyrin repeats (3 copies) 162 240 8.1E-8 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 207 238 0.19 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 497 526 0.43 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 174 203 0.035 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 108 137 190.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 297 326 5.7 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 420 449 0.13 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 330 361 110.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 141 170 24.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 42 71 120.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 530 559 0.033 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 453 493 4300.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 563 592 210.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SMART SM00248 75 104 0.19 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SUPERFAMILY SSF48403 47 372 3.48E-47 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 Gene3D G3DSA:1.25.40.20 17 389 1.1E-65 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 Gene3D G3DSA:1.25.40.20 395 644 8.6E-38 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_2000 235d2f8ec1c214359e74d341b1bb9e95 645 SUPERFAMILY SSF48403 277 593 1.24E-37 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_0591 0b720770f41011c2ff5c4d9959726bce 137 Pfam PF00583 Acetyltransferase (GNAT) family 12 117 3.3E-15 T 14-10-2018 IPR000182 GNAT domain ABED_0591 0b720770f41011c2ff5c4d9959726bce 137 Gene3D G3DSA:3.40.630.30 1 137 2.6E-28 T 14-10-2018 ABED_0591 0b720770f41011c2ff5c4d9959726bce 137 SUPERFAMILY SSF55729 1 136 1.63E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0521 fc3b96b6bcda5e5d73c1541ef4e227b1 75 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 4 52 1.2E-10 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type ABED_0521 fc3b96b6bcda5e5d73c1541ef4e227b1 75 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 5 46 5.0E-12 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type ABED_0739 b95388721f4a62aa1b02d24f2a4d1394 665 SMART SM00283 369 608 4.0E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0739 b95388721f4a62aa1b02d24f2a4d1394 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 583 1.3E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0739 b95388721f4a62aa1b02d24f2a4d1394 665 Gene3D G3DSA:1.10.287.950 317 613 1.4E-56 T 14-10-2018 ABED_0739 b95388721f4a62aa1b02d24f2a4d1394 665 SUPERFAMILY SSF58104 389 615 7.32E-53 T 14-10-2018 ABED_0739 b95388721f4a62aa1b02d24f2a4d1394 665 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 178 2.5E-16 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 SUPERFAMILY SSF141868 304 539 1.57E-59 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 SMART SM00448 11 124 1.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 Pfam PF00563 EAL domain 305 534 1.5E-56 T 14-10-2018 IPR001633 EAL domain ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 Pfam PF00990 Diguanylate cyclase, GGDEF domain 138 280 3.9E-14 T 14-10-2018 IPR000160 GGDEF domain ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 Gene3D G3DSA:3.20.20.450 299 541 4.4E-63 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 SUPERFAMILY SSF55073 141 262 1.41E-15 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 SMART SM00052 298 539 1.7E-39 T 14-10-2018 IPR001633 EAL domain ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 Gene3D G3DSA:3.30.70.270 137 298 1.4E-18 T 14-10-2018 ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 SUPERFAMILY SSF52172 9 128 5.83E-32 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 Gene3D G3DSA:3.40.50.2300 3 128 1.3E-32 T 14-10-2018 ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 SMART SM00267 124 286 1.3E-6 T 14-10-2018 IPR000160 GGDEF domain ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 Pfam PF00072 Response regulator receiver domain 13 124 2.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0519 fb8fd26e5ffe508dacdc904ab733beff 541 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 281 2.2E-10 T 14-10-2018 IPR000160 GGDEF domain ABED_1657 2b97b2033b6891f3e960e2ca191820ff 84 Pfam PF00037 4Fe-4S binding domain 6 25 4.3E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1657 2b97b2033b6891f3e960e2ca191820ff 84 SUPERFAMILY SSF54862 4 70 1.19E-19 T 14-10-2018 ABED_1657 2b97b2033b6891f3e960e2ca191820ff 84 Gene3D G3DSA:3.30.70.20 2 81 2.6E-31 T 14-10-2018 ABED_1657 2b97b2033b6891f3e960e2ca191820ff 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0958 c7694bd79e0eec3b93d8a1e2f0799d53 166 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 6 159 3.9E-63 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 ABED_0958 c7694bd79e0eec3b93d8a1e2f0799d53 166 SUPERFAMILY SSF52016 2 161 2.94E-51 T 14-10-2018 ABED_0958 c7694bd79e0eec3b93d8a1e2f0799d53 166 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 4 163 38.692 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 ABED_0958 c7694bd79e0eec3b93d8a1e2f0799d53 166 Gene3D G3DSA:3.20.19.10 1 165 7.1E-64 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABED_0958 c7694bd79e0eec3b93d8a1e2f0799d53 166 Pfam PF00694 Aconitase C-terminal domain 43 102 1.2E-21 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ABED_0168 8375aeea6a15a726ebf45e899c1e34be 117 Pfam PF03788 LrgA family 12 104 5.3E-24 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 243 2.4E-62 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 SUPERFAMILY SSF54506 126 244 2.47E-26 T 14-10-2018 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 Pfam PF01678 Diaminopimelate epimerase 132 239 1.1E-13 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 Pfam PF01678 Diaminopimelate epimerase 4 116 9.4E-22 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 Gene3D G3DSA:3.10.310.10 110 235 4.1E-60 T 14-10-2018 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 SUPERFAMILY SSF54506 1 117 1.17E-29 T 14-10-2018 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 246 24.575 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABED_0136 a439a0dffa3bd9bc3da8e0b84a730887 246 Gene3D G3DSA:3.10.310.10 3 243 4.1E-60 T 14-10-2018 ABED_1372 dab157bec627bfc232097c65aa6fc0da 234 Gene3D G3DSA:3.30.930.10 3 234 7.9E-43 T 14-10-2018 ABED_1372 dab157bec627bfc232097c65aa6fc0da 234 SUPERFAMILY SSF55681 6 233 1.57E-42 T 14-10-2018 ABED_1372 dab157bec627bfc232097c65aa6fc0da 234 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 175 9.3E-9 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABED_1997 858c31d6df9040ae86ca8045e5a63161 229 Gene3D G3DSA:3.40.1180.10 1 229 4.7E-92 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ABED_1997 858c31d6df9040ae86ca8045e5a63161 229 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 8 227 4.6E-87 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABED_1997 858c31d6df9040ae86ca8045e5a63161 229 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 173 190 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 ABED_1997 858c31d6df9040ae86ca8045e5a63161 229 Pfam PF01255 Putative undecaprenyl diphosphate synthase 14 227 1.0E-78 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABED_1997 858c31d6df9040ae86ca8045e5a63161 229 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 7 228 38.703 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABED_1997 858c31d6df9040ae86ca8045e5a63161 229 SUPERFAMILY SSF64005 5 223 1.22E-81 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 Pfam PF00117 Glutamine amidotransferase class-I 4 187 1.8E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 Gene3D G3DSA:3.40.50.880 1 188 7.1E-66 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 SUPERFAMILY SSF52317 1 188 3.74E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.6E-14 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.6E-14 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.6E-14 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 6.4E-35 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00097 Anthranilate synthase component II signature 166 179 6.4E-35 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00097 Anthranilate synthase component II signature 120 132 6.4E-35 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.4E-35 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.4E-35 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 6.4E-35 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.3E-6 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.3E-6 T 14-10-2018 ABED_1808 5d9c52e32070e45f0cc18896f6f4f00b 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 188 7.4E-72 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 66 113 6.0E-15 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 229 291 2.4E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 142 216 1.3E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 PIRSF PIRSF000006 36 296 2.5E-48 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 SUPERFAMILY SSF46626 85 221 1.41E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 Gene3D G3DSA:1.10.760.10 226 294 6.7E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 Gene3D G3DSA:1.20.58.1490 31 125 6.9E-10 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 Gene3D G3DSA:1.10.760.10 126 225 7.7E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1884 3ec49d176c1f28f370bccf4e9d1e7ec6 296 SUPERFAMILY SSF46626 226 295 4.88E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0300 59aeb1d8826eb77cb89aaafb1051c4b5 603 SUPERFAMILY SSF50475 1 318 1.18E-97 T 14-10-2018 ABED_0300 59aeb1d8826eb77cb89aaafb1051c4b5 603 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5 422 3.5E-126 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 ABED_0300 59aeb1d8826eb77cb89aaafb1051c4b5 603 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 463 549 2.5E-6 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 ABED_0300 59aeb1d8826eb77cb89aaafb1051c4b5 603 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 447 9.4E-136 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 ABED_0300 59aeb1d8826eb77cb89aaafb1051c4b5 603 SUPERFAMILY SSF143968 462 588 7.98E-11 T 14-10-2018 ABED_0300 59aeb1d8826eb77cb89aaafb1051c4b5 603 SUPERFAMILY SSF143968 319 470 1.83E-40 T 14-10-2018 ABED_0300 59aeb1d8826eb77cb89aaafb1051c4b5 603 Gene3D G3DSA:3.40.1670.10 333 447 1.2E-27 T 14-10-2018 ABED_0300 59aeb1d8826eb77cb89aaafb1051c4b5 603 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 4 441 2.1E-191 T 14-10-2018 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 ABED_1971 33c626496d6da6f6f662849bc15b968e 362 Gene3D G3DSA:3.30.413.10 123 278 5.9E-57 T 14-10-2018 ABED_1971 33c626496d6da6f6f662849bc15b968e 362 SUPERFAMILY SSF55124 247 358 4.09E-6 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1971 33c626496d6da6f6f662849bc15b968e 362 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 115 1.2E-7 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1971 33c626496d6da6f6f662849bc15b968e 362 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 124 262 1.6E-16 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1971 33c626496d6da6f6f662849bc15b968e 362 Gene3D G3DSA:3.90.480.10 56 346 5.9E-57 T 14-10-2018 ABED_1971 33c626496d6da6f6f662849bc15b968e 362 SUPERFAMILY SSF55124 6 121 3.6E-14 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABED_1971 33c626496d6da6f6f662849bc15b968e 362 SUPERFAMILY SSF56014 124 270 2.62E-26 T 14-10-2018 ABED_0379 23617e70090070a5d474a88540ffe621 390 SUPERFAMILY SSF53244 271 385 1.07E-15 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_0379 23617e70090070a5d474a88540ffe621 390 Gene3D G3DSA:3.90.190.20 271 388 1.0E-14 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_0379 23617e70090070a5d474a88540ffe621 390 SUPERFAMILY SSF53623 21 259 1.56E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_0379 23617e70090070a5d474a88540ffe621 390 Gene3D G3DSA:3.40.1190.10 6 265 2.6E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_0379 23617e70090070a5d474a88540ffe621 390 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 139 154 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 ABED_0379 23617e70090070a5d474a88540ffe621 390 Pfam PF08245 Mur ligase middle domain 49 223 5.7E-7 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABED_0379 23617e70090070a5d474a88540ffe621 390 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 383 3.6E-76 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 Gene3D G3DSA:3.40.50.300 104 284 1.1E-51 T 14-10-2018 ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 Pfam PF00270 DEAD/DEAH box helicase 118 274 2.8E-12 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 SMART SM00487 111 298 1.9E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 SMART SM00490 393 490 1.1E-9 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 Pfam PF00271 Helicase conserved C-terminal domain 415 490 7.4E-8 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 TIGRFAM TIGR00595 priA: primosomal protein N' 133 604 2.4E-145 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 614 18.81 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 SUPERFAMILY SSF52540 126 496 1.4E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1301 086edc5ea772c473bffa5d88f8cc534b 615 Gene3D G3DSA:1.10.8.630 10 103 1.2E-5 T 14-10-2018 ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Pfam PF13426 PAS domain 675 768 2.3E-12 T 14-10-2018 IPR000014 PAS domain ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Pfam PF13426 PAS domain 788 875 0.0061 T 14-10-2018 IPR000014 PAS domain ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SUPERFAMILY SSF55785 788 884 1.92E-7 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 603 2.7E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Pfam PF00989 PAS fold 888 980 8.3E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Gene3D G3DSA:1.10.287.130 399 462 6.3E-25 T 14-10-2018 ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Gene3D G3DSA:3.30.450.20 771 873 1.3E-7 T 14-10-2018 ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Gene3D G3DSA:3.30.450.20 875 992 2.4E-19 T 14-10-2018 ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Gene3D G3DSA:3.30.450.20 652 770 6.6E-16 T 14-10-2018 ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SUPERFAMILY SSF55874 469 612 2.01E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SMART SM00086 837 877 160.0 T 14-10-2018 IPR001610 PAC motif ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SMART SM00086 727 769 2.3E-7 T 14-10-2018 IPR001610 PAC motif ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SUPERFAMILY SSF55785 668 769 9.07E-13 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SUPERFAMILY SSF55785 873 974 2.79E-11 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 882 981 2.1E-11 T 14-10-2018 IPR000014 PAS domain ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 655 776 2.5E-15 T 14-10-2018 IPR000014 PAS domain ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SMART SM00387 506 616 3.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Pfam PF07695 7TM diverse intracellular signalling 169 361 9.2E-11 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 Gene3D G3DSA:3.30.565.10 463 610 6.3E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SMART SM00091 655 722 4.8 T 14-10-2018 IPR000014 PAS domain ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SMART SM00091 885 951 3.4E-5 T 14-10-2018 IPR000014 PAS domain ABED_0587 42cfb60dede5dd6d40eeeaaaa953b71a 993 SMART SM00091 777 844 64.0 T 14-10-2018 IPR000014 PAS domain ABED_1338 cc7359366a0b7ae862c9952985839f31 580 Gene3D G3DSA:1.10.645.10 2 557 1.0E-224 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1338 cc7359366a0b7ae862c9952985839f31 580 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 548 557 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 ABED_1338 cc7359366a0b7ae862c9952985839f31 580 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 41 66 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 ABED_1338 cc7359366a0b7ae862c9952985839f31 580 SUPERFAMILY SSF56762 5 557 8.24E-163 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1338 cc7359366a0b7ae862c9952985839f31 580 Pfam PF00374 Nickel-dependent hydrogenase 41 557 2.5E-219 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 ABED_0034 681b69575772e3d7d299b01f2fe3ac5e 214 SUPERFAMILY SSF46894 140 211 1.87E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_0034 681b69575772e3d7d299b01f2fe3ac5e 214 SUPERFAMILY SSF52172 1 162 3.42E-27 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0034 681b69575772e3d7d299b01f2fe3ac5e 214 SMART SM00448 1 111 4.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0034 681b69575772e3d7d299b01f2fe3ac5e 214 SMART SM00862 141 211 6.1E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0034 681b69575772e3d7d299b01f2fe3ac5e 214 Gene3D G3DSA:1.10.10.10 125 214 9.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0034 681b69575772e3d7d299b01f2fe3ac5e 214 Pfam PF00072 Response regulator receiver domain 3 111 3.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0034 681b69575772e3d7d299b01f2fe3ac5e 214 Gene3D G3DSA:3.40.50.2300 1 124 4.3E-28 T 14-10-2018 ABED_0034 681b69575772e3d7d299b01f2fe3ac5e 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 211 7.7E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1236 1739fa877a2a71d34ff33ba679e26614 69 Pfam PF07411 Domain of unknown function (DUF1508) 18 52 1.0E-8 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 ABED_1236 1739fa877a2a71d34ff33ba679e26614 69 Gene3D G3DSA:3.30.160.160 12 56 1.1E-14 T 14-10-2018 ABED_1236 1739fa877a2a71d34ff33ba679e26614 69 SUPERFAMILY SSF160113 14 55 2.49E-9 T 14-10-2018 IPR036913 YegP-like superfamily ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 8.9E-11 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 8.9E-11 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 8.9E-11 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 SMART SM01097 2 132 4.5E-78 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00097 Anthranilate synthase component II signature 264 275 3.3E-5 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00097 Anthranilate synthase component II signature 346 359 3.3E-5 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00097 Anthranilate synthase component II signature 236 245 3.3E-5 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 SUPERFAMILY SSF52317 177 371 6.64E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 SUPERFAMILY SSF52021 2 146 8.76E-53 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 Pfam PF00117 Glutamine amidotransferase class-I 191 369 3.0E-36 T 14-10-2018 IPR017926 Glutamine amidotransferase ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 Gene3D G3DSA:3.40.50.880 150 372 3.8E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 6 371 2.6E-133 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 372 42.853 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 129 1.9E-47 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 5.0E-31 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 5.0E-31 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 190 204 5.0E-31 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 5.0E-31 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 304 315 5.0E-31 T 14-10-2018 ABED_0121 63dd097bb456e2664e1e63fc72edb267 372 Gene3D G3DSA:3.50.30.20 1 148 1.2E-50 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABED_1321 339d6dfef104cce7d5ae3f4bce70cec8 100 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 9 92 1.9E-28 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane ABED_1321 339d6dfef104cce7d5ae3f4bce70cec8 100 Pfam PF12823 Domain of unknown function (DUF3817) 7 92 7.6E-23 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 SUPERFAMILY SSF46557 3 78 1.96E-22 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 Gene3D G3DSA:3.10.50.30 77 156 7.8E-25 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 SUPERFAMILY SSF54534 80 156 9.55E-22 T 14-10-2018 ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 2.1E-26 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 27.188 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 PIRSF PIRSF006092 1 158 3.7E-46 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 7.4E-50 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.7E-23 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ABED_0575 1d71f5e1d0049db8a5a140ce962c87cd 161 Gene3D G3DSA:1.10.287.180 1 75 1.7E-23 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 524 1.2E-225 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 9 525 54.466 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 Gene3D G3DSA:2.170.8.10 35 331 1.9E-218 T 14-10-2018 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 Gene3D G3DSA:3.40.449.10 17 216 1.9E-218 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 SUPERFAMILY SSF53795 211 523 1.06E-133 T 14-10-2018 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 Gene3D G3DSA:3.90.228.20 217 509 1.9E-218 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 247 262 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 SUPERFAMILY SSF68923 7 209 1.19E-76 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 PIRSF PIRSF006294 1 525 2.5E-233 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABED_1148 eac6302e593131b03c11bfde27fb24e1 525 Pfam PF01293 Phosphoenolpyruvate carboxykinase 16 477 3.3E-216 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABED_1279 02766232998d2b0e29ba49c6c0cce6e6 147 SUPERFAMILY SSF55821 8 147 6.1E-8 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABED_0117 93c50397a24caa8069dfb1a5f90878e7 280 SUPERFAMILY SSF109604 3 271 5.34E-40 T 14-10-2018 ABED_0117 93c50397a24caa8069dfb1a5f90878e7 280 Pfam PF08668 HDOD domain 14 208 2.0E-26 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD ABED_0117 93c50397a24caa8069dfb1a5f90878e7 280 Gene3D G3DSA:1.10.3210.10 1 276 3.3E-43 T 14-10-2018 ABED_0450 48dc50576f6c9b791c8017f0cc8fe275 202 Pfam PF00117 Glutamine amidotransferase class-I 5 198 3.5E-20 T 14-10-2018 IPR017926 Glutamine amidotransferase ABED_0450 48dc50576f6c9b791c8017f0cc8fe275 202 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 201 35.104 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABED_0450 48dc50576f6c9b791c8017f0cc8fe275 202 Gene3D G3DSA:3.40.50.880 1 202 8.5E-80 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0450 48dc50576f6c9b791c8017f0cc8fe275 202 SUPERFAMILY SSF52317 2 200 3.2E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0450 48dc50576f6c9b791c8017f0cc8fe275 202 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 200 2.6E-67 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABED_0450 48dc50576f6c9b791c8017f0cc8fe275 202 PIRSF PIRSF000495 1 202 6.4E-73 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABED_1709 5d4fea23db0415c71d466e0eab848950 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 66 1.1E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal ABED_1709 5d4fea23db0415c71d466e0eab848950 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.66 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ABED_1709 5d4fea23db0415c71d466e0eab848950 141 SUPERFAMILY SSF46906 67 139 3.53E-20 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ABED_1709 5d4fea23db0415c71d466e0eab848950 141 SMART SM00649 9 140 3.6E-72 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ABED_1709 5d4fea23db0415c71d466e0eab848950 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-11 T 14-10-2018 ABED_1709 5d4fea23db0415c71d466e0eab848950 141 Gene3D G3DSA:1.10.10.250 69 140 1.1E-20 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ABED_1709 5d4fea23db0415c71d466e0eab848950 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 139 2.0E-58 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1709 5d4fea23db0415c71d466e0eab848950 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 138 2.2E-17 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ABED_1709 5d4fea23db0415c71d466e0eab848950 141 Gene3D G3DSA:3.30.1550.10 2 68 8.3E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ABED_1709 5d4fea23db0415c71d466e0eab848950 141 SUPERFAMILY SSF54747 3 71 2.22E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ABED_1135 373b36d91f1f0d83c57daa8b0b04bfca 412 SUPERFAMILY SSF63411 15 209 4.33E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABED_1135 373b36d91f1f0d83c57daa8b0b04bfca 412 SUPERFAMILY SSF63411 234 410 1.18E-34 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABED_1135 373b36d91f1f0d83c57daa8b0b04bfca 412 Pfam PF05193 Peptidase M16 inactive domain 169 344 2.6E-21 T 14-10-2018 IPR007863 Peptidase M16, C-terminal ABED_1135 373b36d91f1f0d83c57daa8b0b04bfca 412 Pfam PF00675 Insulinase (Peptidase family M16) 36 162 3.8E-7 T 14-10-2018 IPR011765 Peptidase M16, N-terminal ABED_1135 373b36d91f1f0d83c57daa8b0b04bfca 412 Gene3D G3DSA:3.30.830.10 13 217 2.3E-29 T 14-10-2018 ABED_1135 373b36d91f1f0d83c57daa8b0b04bfca 412 Gene3D G3DSA:3.30.830.10 226 412 4.9E-39 T 14-10-2018 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 723 1.7E-214 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Pfam PF03725 3' exoribonuclease family, domain 2 147 228 1.1E-14 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Pfam PF03725 3' exoribonuclease family, domain 2 479 549 2.3E-5 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Gene3D G3DSA:3.30.230.70 1 248 3.4E-70 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 SUPERFAMILY SSF55666 143 253 3.09E-20 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 263 339 1.4E-8 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Gene3D G3DSA:2.40.50.140 656 725 2.3E-20 T 14-10-2018 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Pfam PF00013 KH domain 574 632 4.8E-9 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Gene3D G3DSA:3.30.1370.10 567 641 3.0E-15 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 SUPERFAMILY SSF55666 470 562 2.1E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 SUPERFAMILY SSF54791 573 672 5.84E-13 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 PIRSF PIRSF005499 1 725 3.3E-248 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 SMART SM00322 570 636 2.2E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Pfam PF00575 S1 RNA binding domain 656 718 1.5E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 SUPERFAMILY SSF50249 649 722 9.7E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Pfam PF01138 3' exoribonuclease family, domain 1 344 476 1.9E-15 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Pfam PF01138 3' exoribonuclease family, domain 1 21 142 8.3E-15 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Gene3D G3DSA:3.30.230.70 254 566 5.1E-96 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 SUPERFAMILY SSF54211 6 142 1.06E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 725 26.44 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 SMART SM00316 655 724 4.6E-18 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_1112 eec2cc1f6ced5d0ea3183dc98f649777 725 SUPERFAMILY SSF54211 310 507 8.6E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1748 4eb7fc68e0939c8299ca5ea385564ef3 375 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 5 374 1.8E-42 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 ABED_1748 4eb7fc68e0939c8299ca5ea385564ef3 375 Gene3D G3DSA:1.20.1330.10 59 229 2.0E-22 T 14-10-2018 ABED_1748 4eb7fc68e0939c8299ca5ea385564ef3 375 SUPERFAMILY SSF64518 12 374 8.5E-38 T 14-10-2018 ABED_1636 6a5b43f2b433d62849d2f0d7558a0781 349 Pfam PF00534 Glycosyl transferases group 1 171 327 5.6E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 ABED_1636 6a5b43f2b433d62849d2f0d7558a0781 349 Gene3D G3DSA:3.40.50.2000 55 343 2.4E-54 T 14-10-2018 ABED_1636 6a5b43f2b433d62849d2f0d7558a0781 349 Pfam PF13439 Glycosyltransferase Family 4 54 138 2.9E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABED_1636 6a5b43f2b433d62849d2f0d7558a0781 349 Gene3D G3DSA:3.40.50.2000 154 333 2.4E-54 T 14-10-2018 ABED_1636 6a5b43f2b433d62849d2f0d7558a0781 349 SUPERFAMILY SSF53756 3 346 2.83E-57 T 14-10-2018 ABED_0080 5522095cf2cab36508dfca3a4f4daf9b 154 TIGRFAM TIGR00077 lspA: signal peptidase II 7 150 8.0E-28 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABED_0080 5522095cf2cab36508dfca3a4f4daf9b 154 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 124 140 2.8E-12 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABED_0080 5522095cf2cab36508dfca3a4f4daf9b 154 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 2.8E-12 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABED_0080 5522095cf2cab36508dfca3a4f4daf9b 154 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 2.8E-12 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABED_0080 5522095cf2cab36508dfca3a4f4daf9b 154 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 149 13.094 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABED_0080 5522095cf2cab36508dfca3a4f4daf9b 154 ProSitePatterns PS00855 Signal peptidases II signature. 92 104 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABED_0080 5522095cf2cab36508dfca3a4f4daf9b 154 Pfam PF01252 Signal peptidase (SPase) II 11 143 2.7E-24 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABED_0629 4b1dd28cdc78a6c1c9b6222b7ba16452 260 Pfam PF00795 Carbon-nitrogen hydrolase 2 218 3.8E-39 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ABED_0629 4b1dd28cdc78a6c1c9b6222b7ba16452 260 SUPERFAMILY SSF56317 1 258 2.49E-58 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABED_0629 4b1dd28cdc78a6c1c9b6222b7ba16452 260 Gene3D G3DSA:3.60.110.10 1 256 3.3E-69 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABED_2098 bf9f5285aa39f3a9d6b48cfda8d8005c 123 SMART SM00278 56 75 96.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABED_2098 bf9f5285aa39f3a9d6b48cfda8d8005c 123 SMART SM00278 27 46 5.4E-5 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABED_2098 bf9f5285aa39f3a9d6b48cfda8d8005c 123 Pfam PF12836 Helix-hairpin-helix motif 19 72 4.6E-14 T 14-10-2018 ABED_2098 bf9f5285aa39f3a9d6b48cfda8d8005c 123 Gene3D G3DSA:1.10.150.320 13 75 5.7E-15 T 14-10-2018 ABED_2098 bf9f5285aa39f3a9d6b48cfda8d8005c 123 SUPERFAMILY SSF47781 18 80 7.41E-19 T 14-10-2018 IPR010994 RuvA domain 2-like ABED_0876 bc659b0e76a8c8ec245666c5fc29b6d9 723 SMART SM01080 35 364 1.7E-81 T 14-10-2018 IPR007890 CHASE2 ABED_0876 bc659b0e76a8c8ec245666c5fc29b6d9 723 Pfam PF05226 CHASE2 domain 26 362 5.2E-60 T 14-10-2018 IPR007890 CHASE2 ABED_0876 bc659b0e76a8c8ec245666c5fc29b6d9 723 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 461 642 7.7E-36 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ABED_0876 bc659b0e76a8c8ec245666c5fc29b6d9 723 SMART SM00044 424 628 1.2E-18 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ABED_0876 bc659b0e76a8c8ec245666c5fc29b6d9 723 SUPERFAMILY SSF55073 461 647 3.77E-59 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0876 bc659b0e76a8c8ec245666c5fc29b6d9 723 Gene3D G3DSA:3.30.70.1230 454 658 8.6E-67 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1448 6907e27df8e676507bc9465acfcf348b 313 SUPERFAMILY SSF103481 41 142 4.58E-13 T 14-10-2018 ABED_1448 6907e27df8e676507bc9465acfcf348b 313 SUPERFAMILY SSF103481 207 288 2.48E-10 T 14-10-2018 ABED_1448 6907e27df8e676507bc9465acfcf348b 313 Pfam PF00892 EamA-like transporter family 149 285 8.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_1448 6907e27df8e676507bc9465acfcf348b 313 Pfam PF00892 EamA-like transporter family 6 139 1.3E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_1315 a1ed57f80ae0bd59dc7d9994e6d17882 657 Gene3D G3DSA:1.10.287.950 304 598 1.9E-57 T 14-10-2018 ABED_1315 a1ed57f80ae0bd59dc7d9994e6d17882 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 413 568 2.8E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1315 a1ed57f80ae0bd59dc7d9994e6d17882 657 SMART SM00283 352 603 7.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1315 a1ed57f80ae0bd59dc7d9994e6d17882 657 SUPERFAMILY SSF58104 229 598 1.96E-55 T 14-10-2018 ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 PRINTS PR00625 DnaJ domain signature 60 79 2.8E-26 T 14-10-2018 IPR001623 DnaJ domain ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 PRINTS PR00625 DnaJ domain signature 6 24 2.8E-26 T 14-10-2018 IPR001623 DnaJ domain ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 PRINTS PR00625 DnaJ domain signature 40 60 2.8E-26 T 14-10-2018 IPR001623 DnaJ domain ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 PRINTS PR00625 DnaJ domain signature 24 39 2.8E-26 T 14-10-2018 IPR001623 DnaJ domain ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 Gene3D G3DSA:2.60.260.20 124 188 1.1E-15 T 14-10-2018 ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 SUPERFAMILY SSF49493 195 271 1.31E-14 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 14-10-2018 IPR018253 DnaJ domain, conserved site ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 Pfam PF00226 DnaJ domain 5 65 2.6E-26 T 14-10-2018 IPR001623 DnaJ domain ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 SUPERFAMILY SSF46565 3 114 1.14E-32 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 SMART SM00271 3 60 5.1E-29 T 14-10-2018 IPR001623 DnaJ domain ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 Pfam PF01556 DnaJ C terminal domain 130 269 3.3E-31 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 Gene3D G3DSA:1.10.287.110 1 111 2.3E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 Gene3D G3DSA:2.60.260.20 191 288 5.3E-18 T 14-10-2018 ABED_1270 1f7b91c2596204b3309733ade604f2bc 289 SUPERFAMILY SSF49493 125 202 2.75E-11 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 SMART SM00382 358 503 4.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Gene3D G3DSA:2.30.130.40 6 116 2.5E-20 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 708 716 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 203 1.1E-26 T 14-10-2018 IPR003111 Lon, substrate-binding domain ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 TIGRFAM TIGR00763 lon: endopeptidase La 15 804 1.5E-268 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 SUPERFAMILY SSF52540 312 583 1.59E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 758 776 3.2E-45 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 366 385 3.2E-45 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 3.2E-45 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 735 754 3.2E-45 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 606 622 3.2E-45 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 SUPERFAMILY SSF54211 606 802 1.1E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 PIRSF PIRSF001174 1 805 3.2E-290 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Gene3D G3DSA:1.10.8.60 502 595 5.4E-28 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Hamap MF_01973 Lon protease [lon]. 12 805 58.858 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Gene3D G3DSA:3.40.50.300 316 501 6.4E-58 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 679 805 7.8E-49 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 662 1.1E-24 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Gene3D G3DSA:3.30.230.10 597 804 9.6E-69 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 SUPERFAMILY SSF88697 10 113 2.98E-21 T 14-10-2018 IPR015947 PUA-like superfamily ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Gene3D G3DSA:1.20.58.1480 122 246 6.3E-30 T 14-10-2018 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 362 498 1.8E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_0547 7dce6e203cc34a4db0a86da1f0e016e1 805 SMART SM00464 12 203 7.4E-42 T 14-10-2018 IPR003111 Lon, substrate-binding domain ABED_1098 5b42027d5f6e4e035c7a909b4dfc617a 165 SUPERFAMILY SSF55021 87 165 3.81E-17 T 14-10-2018 ABED_1098 5b42027d5f6e4e035c7a909b4dfc617a 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 14 165 9.2E-41 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABED_1098 5b42027d5f6e4e035c7a909b4dfc617a 165 Pfam PF10369 Small subunit of acetolactate synthase 95 165 6.8E-16 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABED_1098 5b42027d5f6e4e035c7a909b4dfc617a 165 SUPERFAMILY SSF55021 15 86 3.72E-20 T 14-10-2018 ABED_1098 5b42027d5f6e4e035c7a909b4dfc617a 165 Pfam PF13710 ACT domain 26 85 1.3E-13 T 14-10-2018 ABED_1098 5b42027d5f6e4e035c7a909b4dfc617a 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 14 87 3.0E-24 T 14-10-2018 ABED_1098 5b42027d5f6e4e035c7a909b4dfc617a 165 Gene3D G3DSA:3.30.70.260 12 90 5.6E-31 T 14-10-2018 ABED_1098 5b42027d5f6e4e035c7a909b4dfc617a 165 Gene3D G3DSA:3.30.70.1150 93 165 1.6E-14 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal ABED_0672 60aea1150fa50c15de2dfcabb9388792 617 SUPERFAMILY SSF158472 345 390 3.4E-5 T 14-10-2018 ABED_0672 60aea1150fa50c15de2dfcabb9388792 617 Pfam PF07568 Histidine kinase 423 498 2.0E-22 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain ABED_0672 60aea1150fa50c15de2dfcabb9388792 617 Gene3D G3DSA:3.30.450.20 395 474 2.6E-8 T 14-10-2018 ABED_0672 60aea1150fa50c15de2dfcabb9388792 617 Gene3D G3DSA:3.30.565.10 480 617 2.7E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0672 60aea1150fa50c15de2dfcabb9388792 617 SUPERFAMILY SSF55874 504 611 2.88E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1368 7d09e0c7f48e7c4927e7a11fb2c8e1f7 157 Gene3D G3DSA:2.30.110.10 1 156 4.6E-44 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABED_1368 7d09e0c7f48e7c4927e7a11fb2c8e1f7 157 SUPERFAMILY SSF50475 4 156 1.31E-46 T 14-10-2018 ABED_1368 7d09e0c7f48e7c4927e7a11fb2c8e1f7 157 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 12 148 3.3E-22 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related ABED_1644 007ce694d8ad13312f010a967b352b8f 485 PIRSF PIRSF500217 1 485 1.3E-151 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 ABED_1644 007ce694d8ad13312f010a967b352b8f 485 PIRSF PIRSF016636 1 485 4.0E-156 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB ABED_1644 007ce694d8ad13312f010a967b352b8f 485 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 47 370 3.1E-38 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 Gene3D G3DSA:1.10.10.1600 461 538 3.4E-28 T 14-10-2018 ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 Pfam PF14579 Helix-hairpin-helix motif 831 922 6.3E-24 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 Gene3D G3DSA:3.20.20.140 1 285 1.1E-103 T 14-10-2018 ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 1054 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 Gene3D G3DSA:1.10.150.870 804 911 7.8E-6 T 14-10-2018 ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 Pfam PF02811 PHP domain 9 188 8.7E-51 T 14-10-2018 IPR004013 PHP domain GO:0003824 ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 328 757 4.6E-172 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 SMART SM00481 8 75 1.4E-32 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 SUPERFAMILY SSF89550 7 278 3.53E-34 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABED_2073 e36c5e1487e35fe1a4b9e72049938b8c 1187 SUPERFAMILY SSF160975 863 907 7.45E-5 T 14-10-2018 ABED_0096 8d93f09a4f48606b80109463ee7e30c2 467 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 27 379 1.4E-80 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain ABED_0096 8d93f09a4f48606b80109463ee7e30c2 467 Gene3D G3DSA:3.40.190.10 1 449 4.0E-139 T 14-10-2018 ABED_0096 8d93f09a4f48606b80109463ee7e30c2 467 Gene3D G3DSA:3.10.105.10 224 435 4.0E-139 T 14-10-2018 ABED_0096 8d93f09a4f48606b80109463ee7e30c2 467 PIRSF PIRSF002741 1 467 1.9E-123 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABED_0096 8d93f09a4f48606b80109463ee7e30c2 467 SUPERFAMILY SSF53850 2 465 1.38E-124 T 14-10-2018 ABED_0096 8d93f09a4f48606b80109463ee7e30c2 467 Gene3D G3DSA:3.90.76.10 15 129 4.0E-139 T 14-10-2018 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 Gene3D G3DSA:1.10.10.60 8 105 2.3E-21 T 14-10-2018 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 SUPERFAMILY SSF46767 189 271 1.96E-26 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 190 269 9.0E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 SUPERFAMILY SSF53155 113 177 8.24E-13 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 240 246 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 Gene3D G3DSA:3.30.160.70 106 187 6.8E-12 T 14-10-2018 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 Gene3D G3DSA:1.10.10.10 188 272 1.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 Pfam PF12833 Helix-turn-helix domain 31 108 1.5E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 SUPERFAMILY SSF46689 9 58 1.08E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 193 271 4.1E-24 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABED_1365 3063bba1cc2b287d3725048f51b1eabb 275 SMART SM00342 25 107 6.4E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_0576 b7a129d5947ad9967790067f19ec0215 232 Pfam PF00149 Calcineurin-like phosphoesterase 11 196 1.9E-5 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABED_0576 b7a129d5947ad9967790067f19ec0215 232 SUPERFAMILY SSF56300 10 218 1.9E-20 T 14-10-2018 ABED_1925 b0ae6e6f1ea58fa5c17259ae444dbb93 108 Pfam PF02410 Ribosomal silencing factor during starvation 7 99 1.5E-20 T 14-10-2018 ABED_1925 b0ae6e6f1ea58fa5c17259ae444dbb93 108 SUPERFAMILY SSF81301 5 99 9.81E-24 T 14-10-2018 ABED_1925 b0ae6e6f1ea58fa5c17259ae444dbb93 108 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 5 99 1.7E-26 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ABED_1925 b0ae6e6f1ea58fa5c17259ae444dbb93 108 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 101 17.248 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ABED_1925 b0ae6e6f1ea58fa5c17259ae444dbb93 108 Gene3D G3DSA:3.30.460.10 2 102 1.8E-21 T 14-10-2018 ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 348 378 0.011 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 899 934 0.73 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1648 1686 0.013 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 589 621 0.2 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 489 521 0.63 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 Gene3D G3DSA:3.90.540.10 2599 2735 5.6E-44 T 14-10-2018 IPR037146 Colicin/pyocin, DNase domain superfamily GO:0004519 ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 SMART SM00912 45 166 2.2E-43 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 SUPERFAMILY SSF51126 42 290 1.19E-56 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 Gene3D G3DSA:2.160.20.10 32 323 1.4E-90 T 14-10-2018 IPR012334 Pectin lyase fold ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 63 161 2.5E-17 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 Pfam PF05860 haemagglutination activity domain 37 165 6.8E-31 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 SUPERFAMILY SSF54060 2618 2726 2.53E-34 T 14-10-2018 ABED_0890 a7ffad48b82996efb4ddf015880aa101 2735 Pfam PF13332 Haemagluttinin repeat 1818 1934 6.6E-5 T 14-10-2018 IPR025157 Hemagglutinin repeat ABED_0838 121ff4b98d68acb7d0abf12da67ff6b3 305 Gene3D G3DSA:1.10.760.10 33 178 3.1E-104 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0838 121ff4b98d68acb7d0abf12da67ff6b3 305 Pfam PF00034 Cytochrome c 186 294 3.5E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_0838 121ff4b98d68acb7d0abf12da67ff6b3 305 Pfam PF03150 Di-haem cytochrome c peroxidase 33 178 1.1E-47 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 ABED_0838 121ff4b98d68acb7d0abf12da67ff6b3 305 SUPERFAMILY SSF46626 165 297 4.97E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0838 121ff4b98d68acb7d0abf12da67ff6b3 305 SUPERFAMILY SSF46626 13 166 7.22E-43 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0838 121ff4b98d68acb7d0abf12da67ff6b3 305 PIRSF PIRSF000294 14 303 4.3E-100 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 ABED_0838 121ff4b98d68acb7d0abf12da67ff6b3 305 Gene3D G3DSA:1.10.760.10 30 298 3.1E-104 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1673 9bed715d05dca5e5d16daf3ea0f0a7e1 462 SUPERFAMILY SSF56176 5 217 3.36E-67 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABED_1673 9bed715d05dca5e5d16daf3ea0f0a7e1 462 Pfam PF01565 FAD binding domain 40 179 3.6E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABED_1673 9bed715d05dca5e5d16daf3ea0f0a7e1 462 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 459 1.4E-61 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ABED_1673 9bed715d05dca5e5d16daf3ea0f0a7e1 462 Gene3D G3DSA:1.10.45.10 421 460 1.9E-10 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABED_1673 9bed715d05dca5e5d16daf3ea0f0a7e1 462 SUPERFAMILY SSF55103 220 461 5.72E-63 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ABED_1673 9bed715d05dca5e5d16daf3ea0f0a7e1 462 Gene3D G3DSA:3.30.70.2740 337 420 3.3E-17 T 14-10-2018 ABED_1673 9bed715d05dca5e5d16daf3ea0f0a7e1 462 Gene3D G3DSA:3.30.465.40 4 236 1.0E-69 T 14-10-2018 ABED_1028 91c973ff477e810390c60beddb67dd59 75 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 17 64 5.6E-5 T 14-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 ABED_0860 80ac22979c241c41e07a66ff6807408a 197 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.9E-5 T 14-10-2018 ABED_0860 80ac22979c241c41e07a66ff6807408a 197 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 2.9E-5 T 14-10-2018 ABED_0860 80ac22979c241c41e07a66ff6807408a 197 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 130 5.5E-10 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABED_0860 80ac22979c241c41e07a66ff6807408a 197 SUPERFAMILY SSF51905 1 185 4.8E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0860 80ac22979c241c41e07a66ff6807408a 197 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 1.3E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_0860 80ac22979c241c41e07a66ff6807408a 197 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 1.3E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_0860 80ac22979c241c41e07a66ff6807408a 197 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 1.3E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_0860 80ac22979c241c41e07a66ff6807408a 197 Gene3D G3DSA:3.50.50.60 2 188 1.1E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1683 f9bd9abd896e052080318becbf717114 537 Pfam PF16149 Domain of unknown function (DUF4857) 256 519 1.1E-77 T 14-10-2018 IPR032333 Protein of unknown function DUF4857 ABED_1627 57da54660d1381f206e5213af1985e75 478 Pfam PF00294 pfkB family carbohydrate kinase 8 303 1.8E-45 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB ABED_1627 57da54660d1381f206e5213af1985e75 478 Gene3D G3DSA:3.40.1190.20 2 311 2.2E-99 T 14-10-2018 IPR029056 Ribokinase-like ABED_1627 57da54660d1381f206e5213af1985e75 478 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 311 6.9E-115 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 ABED_1627 57da54660d1381f206e5213af1985e75 478 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 335 472 8.2E-57 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 ABED_1627 57da54660d1381f206e5213af1985e75 478 Pfam PF01467 Cytidylyltransferase-like 348 460 8.1E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABED_1627 57da54660d1381f206e5213af1985e75 478 SUPERFAMILY SSF52374 343 470 1.75E-22 T 14-10-2018 ABED_1627 57da54660d1381f206e5213af1985e75 478 SUPERFAMILY SSF53613 9 314 4.21E-52 T 14-10-2018 IPR029056 Ribokinase-like ABED_1627 57da54660d1381f206e5213af1985e75 478 Hamap MF_01603 Bifunctional protein HldE [hldE]. 1 473 40.973 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 ABED_1627 57da54660d1381f206e5213af1985e75 478 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 345 410 6.6E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABED_1627 57da54660d1381f206e5213af1985e75 478 Gene3D G3DSA:3.40.50.620 318 476 2.5E-41 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1311 9f6dacfc143c16ec4e8158097822e9c6 374 PIRSF PIRSF005622 8 374 4.2E-159 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 ABED_1311 9f6dacfc143c16ec4e8158097822e9c6 374 Gene3D G3DSA:3.40.50.11750 26 266 5.7E-112 T 14-10-2018 ABED_1311 9f6dacfc143c16ec4e8158097822e9c6 374 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 10 372 5.0E-153 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 ABED_1311 9f6dacfc143c16ec4e8158097822e9c6 374 Gene3D G3DSA:3.40.50.11740 69 306 5.7E-112 T 14-10-2018 ABED_1311 9f6dacfc143c16ec4e8158097822e9c6 374 Pfam PF01924 Hydrogenase formation hypA family 20 371 1.7E-149 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 ABED_1311 9f6dacfc143c16ec4e8158097822e9c6 374 Gene3D G3DSA:1.10.10.2140 322 374 9.9E-26 T 14-10-2018 ABED_1847 3928bc509dfe9b7849059a15bffe30bd 150 Gene3D G3DSA:3.30.420.40 1 126 4.8E-5 T 14-10-2018 ABED_1847 3928bc509dfe9b7849059a15bffe30bd 150 SUPERFAMILY SSF53067 5 92 5.63E-11 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 ProSitePatterns PS01229 Hypothetical cof family signature 2. 596 618 - T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 150 696 1.8E-148 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 Gene3D G3DSA:2.70.150.20 186 305 1.0E-23 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 SUPERFAMILY SSF56784 392 695 1.65E-47 T 14-10-2018 IPR036412 HAD-like superfamily ABED_0662 b7896c487cdac07a1afdf1638b054041 702 Gene3D G3DSA:3.40.50.1000 375 648 2.7E-82 T 14-10-2018 IPR023214 HAD superfamily ABED_0662 b7896c487cdac07a1afdf1638b054041 702 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 396 402 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 Pfam PF00122 E1-E2 ATPase 210 371 7.6E-32 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 174 675 2.9E-70 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 Pfam PF00702 haloacid dehalogenase-like hydrolase 391 609 8.0E-36 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 619 631 4.1E-22 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 615 4.1E-22 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 543 553 4.1E-22 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 252 266 4.1E-22 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 531 4.1E-22 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 394 408 4.1E-22 T 14-10-2018 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 SUPERFAMILY SSF81653 216 301 1.83E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 Gene3D G3DSA:3.40.1110.10 405 527 2.7E-82 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 596 612 8.7E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 627 652 8.7E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABED_0662 b7896c487cdac07a1afdf1638b054041 702 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 568 584 8.7E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 SUPERFAMILY SSF55874 219 356 2.23E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 Gene3D G3DSA:1.10.287.130 144 211 2.6E-6 T 14-10-2018 ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 SMART SM00388 155 213 1.4E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 Gene3D G3DSA:3.30.565.10 212 356 5.1E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 SMART SM00387 256 356 4.9E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 SUPERFAMILY SSF47384 150 207 1.63E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 303 1.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 338 1.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 356 1.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 317 1.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 355 3.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0061 0eb25a36656e4a36579152d25f45ff24 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 156 205 2.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 Gene3D G3DSA:3.30.300.10 31 308 6.4E-132 T 14-10-2018 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 25 418 2.9E-108 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 SUPERFAMILY SSF55973 23 137 2.75E-31 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 Gene3D G3DSA:3.30.300.10 25 271 6.4E-132 T 14-10-2018 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 Gene3D G3DSA:3.30.300.10 147 411 6.4E-132 T 14-10-2018 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 143 153 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 PIRSF PIRSF000497 17 419 7.2E-135 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 271 409 6.2E-49 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 Pfam PF02772 S-adenosylmethionine synthetase, central domain 141 264 8.2E-29 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 SUPERFAMILY SSF55973 271 418 1.39E-49 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 SUPERFAMILY SSF55973 140 265 4.71E-31 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0420 a2b7162be7af2b3e0dcf9954260c3ee4 419 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 23 129 5.8E-29 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABED_0874 aeb8b701a0b595bd71e3991c6452b31d 298 SUPERFAMILY SSF160240 206 287 1.57E-16 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABED_0874 aeb8b701a0b595bd71e3991c6452b31d 298 SUPERFAMILY SSF161111 5 204 3.92E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABED_0874 aeb8b701a0b595bd71e3991c6452b31d 298 Gene3D G3DSA:3.30.70.1350 203 292 4.0E-19 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABED_0874 aeb8b701a0b595bd71e3991c6452b31d 298 Gene3D G3DSA:1.20.1510.10 5 202 6.9E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABED_0874 aeb8b701a0b595bd71e3991c6452b31d 298 Pfam PF01545 Cation efflux family 11 203 1.9E-38 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABED_0874 aeb8b701a0b595bd71e3991c6452b31d 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 287 1.0E-68 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABED_0874 aeb8b701a0b595bd71e3991c6452b31d 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 208 286 5.5E-18 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.0E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 1.0E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.0E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 1.0E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 1.0E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 SUPERFAMILY SSF48163 303 462 5.62E-32 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 Gene3D G3DSA:3.40.50.620 1 317 4.3E-129 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 462 30.404 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 SUPERFAMILY SSF52374 3 298 5.36E-103 T 14-10-2018 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 308 4.1E-101 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 463 3.7E-166 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABED_0058 5608885e4e007e55db97a6fc81fefcf2 469 Gene3D G3DSA:1.10.10.350 365 469 2.6E-18 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 119 4.1E-40 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 74 99 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 Gene3D G3DSA:3.40.50.10860 6 275 1.9E-111 T 14-10-2018 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 SUPERFAMILY SSF51735 121 277 5.51E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 281 38.413 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 278 3.4E-68 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 SUPERFAMILY SSF53223 2 120 4.89E-40 T 14-10-2018 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 1.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 1.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 1.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 1.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 1.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 1.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 1.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABED_0594 8acb1a59670f1fd42182b5745d60e8da 287 Gene3D G3DSA:3.40.50.720 4 257 1.9E-111 T 14-10-2018 ABED_1336 a9039d854b90b32833c4f737cce47300 196 Pfam PF01750 Hydrogenase maturation protease 22 148 2.5E-22 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1336 a9039d854b90b32833c4f737cce47300 196 SUPERFAMILY SSF53163 3 161 6.02E-32 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABED_1336 a9039d854b90b32833c4f737cce47300 196 PRINTS PR00446 Hydrogen uptake protein signature 58 68 3.6E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1336 a9039d854b90b32833c4f737cce47300 196 PRINTS PR00446 Hydrogen uptake protein signature 37 54 3.6E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1336 a9039d854b90b32833c4f737cce47300 196 PRINTS PR00446 Hydrogen uptake protein signature 16 27 3.6E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1336 a9039d854b90b32833c4f737cce47300 196 PRINTS PR00446 Hydrogen uptake protein signature 4 16 3.6E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1336 a9039d854b90b32833c4f737cce47300 196 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 149 2.7E-33 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1336 a9039d854b90b32833c4f737cce47300 196 Gene3D G3DSA:3.40.50.1450 3 162 4.0E-29 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABED_1305 37e54858a94de1a237984ce2295475e1 137 Gene3D G3DSA:1.10.3680.10 4 124 2.1E-12 T 14-10-2018 IPR029024 TerB-like ABED_1305 37e54858a94de1a237984ce2295475e1 137 SUPERFAMILY SSF158682 7 115 9.68E-15 T 14-10-2018 IPR029024 TerB-like ABED_1771 fa214869fe782de4900e7be51b42f0da 336 Gene3D G3DSA:1.10.220.30 110 204 9.1E-27 T 14-10-2018 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 Pfam PF01706 FliG C-terminal domain 227 332 1.4E-26 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal ABED_1771 fa214869fe782de4900e7be51b42f0da 336 Pfam PF14842 FliG N-terminal domain 15 112 1.0E-22 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain ABED_1771 fa214869fe782de4900e7be51b42f0da 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 257 277 2.3E-37 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 281 307 2.3E-37 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 125 148 2.3E-37 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 235 255 2.3E-37 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 44 70 2.3E-37 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 15 31 2.3E-37 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 SUPERFAMILY SSF48029 125 332 1.29E-52 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical ABED_1771 fa214869fe782de4900e7be51b42f0da 336 SUPERFAMILY SSF48029 18 109 2.01E-14 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical ABED_1771 fa214869fe782de4900e7be51b42f0da 336 Pfam PF14841 FliG middle domain 126 199 3.3E-24 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain ABED_1771 fa214869fe782de4900e7be51b42f0da 336 Gene3D G3DSA:1.10.220.30 12 94 6.0E-11 T 14-10-2018 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 14 332 1.7E-86 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABED_1771 fa214869fe782de4900e7be51b42f0da 336 Gene3D G3DSA:1.10.220.30 205 335 8.9E-30 T 14-10-2018 ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 SUPERFAMILY SSF51126 50 306 5.65E-33 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Gene3D G3DSA:2.160.20.10 25 319 3.4E-61 T 14-10-2018 IPR012334 Pectin lyase fold ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 61 136 3.6E-22 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Gene3D G3DSA:2.160.20.110 1084 1328 1.3E-47 T 14-10-2018 ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Gene3D G3DSA:2.160.20.110 1396 1627 3.4E-39 T 14-10-2018 ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Gene3D G3DSA:2.160.20.110 426 665 5.4E-42 T 14-10-2018 ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Gene3D G3DSA:2.160.20.110 731 915 7.7E-34 T 14-10-2018 ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 SMART SM00912 27 139 7.2E-41 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Pfam PF05860 haemagglutination activity domain 30 139 1.2E-21 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Pfam PF07581 The GLUG motif 1167 1193 1.2E-4 T 14-10-2018 IPR011493 GLUG ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Pfam PF07581 The GLUG motif 823 847 5.5E-5 T 14-10-2018 IPR011493 GLUG ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Pfam PF07581 The GLUG motif 1223 1247 1.4E-4 T 14-10-2018 IPR011493 GLUG ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Pfam PF07581 The GLUG motif 935 960 3.1E-4 T 14-10-2018 IPR011493 GLUG ABED_0490 fdb20ebf3de58ac0bb00cf902c3a80b5 1840 Pfam PF07581 The GLUG motif 848 874 1.3E-4 T 14-10-2018 IPR011493 GLUG ABED_2044 1a76810d15ac2baa07f41c3363a56604 260 Gene3D G3DSA:3.90.78.10 179 260 5.5E-29 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_2044 1a76810d15ac2baa07f41c3363a56604 260 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 32 257 1.3E-50 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_2044 1a76810d15ac2baa07f41c3363a56604 260 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 260 43.301 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_2044 1a76810d15ac2baa07f41c3363a56604 260 Gene3D G3DSA:3.30.465.10 63 178 1.0E-15 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABED_2044 1a76810d15ac2baa07f41c3363a56604 260 SUPERFAMILY SSF56176 34 170 1.2E-14 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABED_2044 1a76810d15ac2baa07f41c3363a56604 260 SUPERFAMILY SSF56194 167 259 9.02E-28 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_2044 1a76810d15ac2baa07f41c3363a56604 260 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 172 257 5.5E-23 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_0574 a338dda84f84322796753743261923a3 219 Gene3D G3DSA:3.40.50.720 1 219 1.9E-49 T 14-10-2018 ABED_0574 a338dda84f84322796753743261923a3 219 Pfam PF00899 ThiF family 3 124 2.0E-25 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ABED_0574 a338dda84f84322796753743261923a3 219 SUPERFAMILY SSF69572 2 214 4.45E-38 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 Gene3D G3DSA:1.10.287.130 385 467 3.0E-13 T 14-10-2018 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 512 628 2.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 SUPERFAMILY SSF55874 471 607 1.44E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 Gene3D G3DSA:3.30.565.10 469 631 1.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 578 2.3E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 599 2.3E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 564 2.3E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 SMART SM01049 202 280 0.36 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 SMART SM01049 74 168 5.5E-19 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 Gene3D G3DSA:3.30.450.20 225 338 3.1E-26 T 14-10-2018 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 Gene3D G3DSA:3.30.450.20 77 224 6.8E-32 T 14-10-2018 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 SUPERFAMILY SSF47384 395 466 3.73E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 SMART SM00387 510 629 8.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1427 0dcf707a7fcb9dbb25a2aba148839dbd 632 Pfam PF08269 Cache domain 37 331 2.9E-81 T 14-10-2018 IPR004010 Double Cache domain 2 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 509 46.884 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 PRINTS PR01041 Methionyl-tRNA synthetase signature 352 363 1.7E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.7E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.7E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 PRINTS PR01041 Methionyl-tRNA synthetase signature 260 275 1.7E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.7E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 PRINTS PR01041 Methionyl-tRNA synthetase signature 229 240 1.7E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 522 649 2.9E-39 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 5 137 2.8E-11 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 Gene3D G3DSA:3.40.50.620 9 337 1.2E-150 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 Gene3D G3DSA:1.10.730.10 341 513 5.6E-36 T 14-10-2018 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 SUPERFAMILY SSF50249 549 649 3.18E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 Gene3D G3DSA:2.170.220.10 119 231 1.2E-150 T 14-10-2018 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 SUPERFAMILY SSF47323 353 510 2.07E-31 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 Pfam PF01588 Putative tRNA binding domain 555 648 7.1E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 Gene3D G3DSA:2.40.50.140 541 650 1.6E-31 T 14-10-2018 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 Pfam PF09334 tRNA synthetases class I (M) 150 364 1.3E-66 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 SUPERFAMILY SSF52374 6 351 6.7E-110 T 14-10-2018 ABED_1143 4b313c049c97d2b7bbe773b0f9ddce84 650 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 511 1.4E-162 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABED_1923 e5953971378e2b9517e0acf7e7db6696 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 21.402 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABED_1923 e5953971378e2b9517e0acf7e7db6696 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 1.4E-20 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABED_1923 e5953971378e2b9517e0acf7e7db6696 78 Pfam PF02416 mttA/Hcf106 family 5 60 1.2E-19 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 Pfam PF00701 Dihydrodipicolinate synthetase family 5 288 2.7E-89 T 14-10-2018 IPR002220 DapA-like GO:0016829 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 SMART SM01130 3 292 3.3E-127 T 14-10-2018 IPR002220 DapA-like GO:0016829 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 290 61.919 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 PIRSF PIRSF001365 1 292 5.1E-85 T 14-10-2018 IPR002220 DapA-like GO:0016829 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 289 2.2E-110 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 SUPERFAMILY SSF51569 1 291 1.04E-91 T 14-10-2018 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 Gene3D G3DSA:3.20.20.70 1 294 8.4E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 166 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 1.1E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.1E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.1E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 ABED_0826 733b0ad4ff329171a2b7e410ad779b44 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 1.1E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 Pfam PF00989 PAS fold 347 445 1.8E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 Gene3D G3DSA:3.30.450.20 43 179 3.4E-5 T 14-10-2018 ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 Gene3D G3DSA:3.30.450.20 329 450 4.0E-30 T 14-10-2018 ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 SUPERFAMILY SSF55785 344 445 2.09E-27 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 SUPERFAMILY SSF109604 456 637 2.14E-39 T 14-10-2018 ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 Pfam PF01966 HD domain 474 596 1.3E-19 T 14-10-2018 IPR006674 HD domain ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 Gene3D G3DSA:1.10.3210.10 451 647 3.2E-77 T 14-10-2018 ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 SMART SM00471 469 606 2.5E-7 T 14-10-2018 IPR003607 HD/PDEase domain ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 SMART SM00091 332 401 7.9E-4 T 14-10-2018 IPR000014 PAS domain ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 Pfam PF14827 Double sensory domain of two-component sensor kinase 46 187 1.5E-10 T 14-10-2018 IPR029150 Double Cache domain 3 ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 SUPERFAMILY SSF103190 47 180 2.0E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 335 453 3.3E-23 T 14-10-2018 IPR000014 PAS domain ABED_0940 3240786869776ec0cd1e21aee14cf6eb 647 SMART SM00086 406 448 3.7E-6 T 14-10-2018 IPR001610 PAC motif ABED_1583 912046fd29112da1f1cbb1ab8c55241b 378 Gene3D G3DSA:1.10.760.10 186 378 3.7E-64 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1583 912046fd29112da1f1cbb1ab8c55241b 378 SUPERFAMILY SSF46626 174 362 1.36E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1583 912046fd29112da1f1cbb1ab8c55241b 378 Gene3D G3DSA:1.10.760.10 17 185 1.1E-60 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1583 912046fd29112da1f1cbb1ab8c55241b 378 PIRSF PIRSF000294 14 370 3.1E-51 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 ABED_1583 912046fd29112da1f1cbb1ab8c55241b 378 SUPERFAMILY SSF46626 20 180 1.18E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1583 912046fd29112da1f1cbb1ab8c55241b 378 Pfam PF03150 Di-haem cytochrome c peroxidase 23 198 7.6E-43 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 ABED_1583 912046fd29112da1f1cbb1ab8c55241b 378 Pfam PF00034 Cytochrome c 207 359 3.4E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 SUPERFAMILY SSF55021 340 409 1.27E-12 T 14-10-2018 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 SUPERFAMILY SSF51735 1 151 2.43E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 Gene3D G3DSA:3.30.70.260 337 409 1.2E-148 T 14-10-2018 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 Gene3D G3DSA:3.40.50.720 2 328 1.2E-148 T 14-10-2018 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 176 198 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 Pfam PF01842 ACT domain 342 405 5.9E-11 T 14-10-2018 IPR002912 ACT domain ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 PIRSF PIRSF000098 1 420 1.4E-155 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 SUPERFAMILY SSF55347 130 295 1.63E-53 T 14-10-2018 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 Gene3D G3DSA:3.30.360.10 129 336 1.2E-148 T 14-10-2018 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 Pfam PF00742 Homoserine dehydrogenase 130 308 4.4E-62 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABED_0149 02ce669d3138848759525d8ec6ef97eb 420 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 114 3.0E-10 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 82 4.9E-15 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 SUPERFAMILY SSF55008 84 156 1.13E-16 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 242 808 1.2E-159 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 527 9.3E-23 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 9.3E-23 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 707 726 9.3E-23 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 742 9.3E-23 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 664 9.3E-23 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 Gene3D G3DSA:3.40.1110.10 523 639 3.5E-68 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 SUPERFAMILY SSF81653 306 402 2.48E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 275 793 2.3E-80 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 Pfam PF00702 haloacid dehalogenase-like hydrolase 512 719 6.5E-31 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 515 521 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 Pfam PF00403 Heavy-metal-associated domain 92 150 8.1E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 SUPERFAMILY SSF56784 512 807 1.3E-47 T 14-10-2018 IPR036412 HAD-like superfamily ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 SUPERFAMILY SSF81665 268 789 1.1E-17 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 Gene3D G3DSA:3.40.50.1000 493 745 3.5E-68 T 14-10-2018 IPR023214 HAD superfamily ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 Pfam PF00122 E1-E2 ATPase 306 493 1.8E-53 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00943 Copper-transporting ATPase signature 426 440 9.0E-10 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00943 Copper-transporting ATPase signature 684 701 9.0E-10 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00943 Copper-transporting ATPase signature 132 152 9.0E-10 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00943 Copper-transporting ATPase signature 273 292 9.0E-10 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00943 Copper-transporting ATPase signature 496 511 9.0E-10 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 224 810 3.0E-142 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 Gene3D G3DSA:2.70.150.20 291 406 4.3E-31 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 Gene3D G3DSA:3.30.70.100 81 154 2.3E-12 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 205 225 7.3E-9 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 111 132 7.3E-9 T 14-10-2018 ABED_0520 3b3728ee0989310c05950509ea6bb52b 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 225 250 7.3E-9 T 14-10-2018 ABED_0463 721e855e18a3caf3342e864285d764e5 341 Gene3D G3DSA:3.40.350.10 1 112 1.4E-17 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABED_0463 721e855e18a3caf3342e864285d764e5 341 Pfam PF00557 Metallopeptidase family M24 119 334 1.2E-54 T 14-10-2018 IPR000994 Peptidase M24 ABED_0463 721e855e18a3caf3342e864285d764e5 341 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 281 293 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ABED_0463 721e855e18a3caf3342e864285d764e5 341 SUPERFAMILY SSF53092 4 97 8.89E-8 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABED_0463 721e855e18a3caf3342e864285d764e5 341 Gene3D G3DSA:3.90.230.10 113 341 8.3E-67 T 14-10-2018 ABED_0463 721e855e18a3caf3342e864285d764e5 341 SUPERFAMILY SSF55920 67 341 1.44E-60 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like ABED_0463 721e855e18a3caf3342e864285d764e5 341 Pfam PF01321 Creatinase/Prolidase N-terminal domain 23 99 8.3E-6 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 ABED_0610 3368f30fe48a6837e865d59607a075ab 420 SUPERFAMILY SSF53383 8 416 2.78E-178 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0610 3368f30fe48a6837e865d59607a075ab 420 PIRSF PIRSF000412 1 418 8.9E-167 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABED_0610 3368f30fe48a6837e865d59607a075ab 420 Gene3D G3DSA:3.40.640.10 38 288 1.8E-183 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0610 3368f30fe48a6837e865d59607a075ab 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABED_0610 3368f30fe48a6837e865d59607a075ab 420 Gene3D G3DSA:3.90.1150.10 11 395 1.8E-183 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0610 3368f30fe48a6837e865d59607a075ab 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 416 51.236 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABED_0610 3368f30fe48a6837e865d59607a075ab 420 Pfam PF00464 Serine hydroxymethyltransferase 9 384 1.7E-175 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABED_1729 9865052e4fe82ad231df36f25d44dd2b 168 SUPERFAMILY SSF46626 90 166 2.15E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1729 9865052e4fe82ad231df36f25d44dd2b 168 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 90 164 2.9E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1729 9865052e4fe82ad231df36f25d44dd2b 168 Gene3D G3DSA:1.10.760.10 89 166 2.9E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_2107 7629085655f040838e1eb628d3b41250 295 Gene3D G3DSA:3.10.620.30 67 288 4.4E-45 T 14-10-2018 ABED_2107 7629085655f040838e1eb628d3b41250 295 Pfam PF01841 Transglutaminase-like superfamily 147 249 2.6E-19 T 14-10-2018 IPR002931 Transglutaminase-like ABED_2107 7629085655f040838e1eb628d3b41250 295 SUPERFAMILY SSF54001 7 276 1.72E-42 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_2107 7629085655f040838e1eb628d3b41250 295 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 82 2.4E-19 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal ABED_2107 7629085655f040838e1eb628d3b41250 295 SMART SM00460 181 251 1.1E-15 T 14-10-2018 IPR002931 Transglutaminase-like ABED_0648 c6e6cfe9a522502205e9c913089db358 284 Pfam PF14743 DNA ligase OB-like domain 223 281 1.0E-20 T 14-10-2018 IPR029319 DNA ligase, OB-like domain ABED_0648 c6e6cfe9a522502205e9c913089db358 284 SUPERFAMILY SSF56091 34 206 8.63E-37 T 14-10-2018 ABED_0648 c6e6cfe9a522502205e9c913089db358 284 Pfam PF01068 ATP dependent DNA ligase domain 50 206 2.1E-12 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 ABED_0648 c6e6cfe9a522502205e9c913089db358 284 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 183 206 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 ABED_0648 c6e6cfe9a522502205e9c913089db358 284 Gene3D G3DSA:2.40.50.140 210 284 9.5E-8 T 14-10-2018 ABED_0648 c6e6cfe9a522502205e9c913089db358 284 Gene3D G3DSA:3.30.1490.70 45 198 2.3E-48 T 14-10-2018 ABED_0648 c6e6cfe9a522502205e9c913089db358 284 SUPERFAMILY SSF50249 180 281 1.05E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0648 c6e6cfe9a522502205e9c913089db358 284 Gene3D G3DSA:3.30.470.30 60 159 2.3E-48 T 14-10-2018 ABED_0786 8a47c2a8cd299a96368c4da00962cafd 193 Gene3D G3DSA:3.90.79.10 40 191 5.3E-53 T 14-10-2018 ABED_0786 8a47c2a8cd299a96368c4da00962cafd 193 Pfam PF00293 NUDIX domain 41 162 3.5E-7 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABED_0786 8a47c2a8cd299a96368c4da00962cafd 193 SUPERFAMILY SSF55811 8 186 3.78E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABED_0786 8a47c2a8cd299a96368c4da00962cafd 193 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 20 184 2.7E-36 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 ABED_1888 d62004667e51a5ead5261b44ee7d9fc3 158 Pfam PF01668 SmpB protein 13 155 9.6E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABED_1888 d62004667e51a5ead5261b44ee7d9fc3 158 Gene3D G3DSA:2.40.280.10 4 134 1.8E-45 T 14-10-2018 IPR023620 Small protein B ABED_1888 d62004667e51a5ead5261b44ee7d9fc3 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 137 1.0E-44 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABED_1888 d62004667e51a5ead5261b44ee7d9fc3 158 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site ABED_1888 d62004667e51a5ead5261b44ee7d9fc3 158 SUPERFAMILY SSF74982 5 137 2.35E-45 T 14-10-2018 IPR023620 Small protein B ABED_1888 d62004667e51a5ead5261b44ee7d9fc3 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 155 1.1E-54 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABED_1888 d62004667e51a5ead5261b44ee7d9fc3 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 61.845 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABED_2034 abaf675e2b567850dc87fc3f33fe0134 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 287 5.3E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_2034 abaf675e2b567850dc87fc3f33fe0134 384 Gene3D G3DSA:2.40.30.170 47 296 1.0E-87 T 14-10-2018 ABED_2034 abaf675e2b567850dc87fc3f33fe0134 384 SUPERFAMILY SSF111369 50 294 4.32E-65 T 14-10-2018 ABED_2034 abaf675e2b567850dc87fc3f33fe0134 384 Gene3D G3DSA:2.40.420.20 297 362 1.0E-87 T 14-10-2018 ABED_2034 abaf675e2b567850dc87fc3f33fe0134 384 Gene3D G3DSA:1.10.287.470 96 169 1.0E-87 T 14-10-2018 ABED_2034 abaf675e2b567850dc87fc3f33fe0134 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 366 5.4E-67 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABED_2034 abaf675e2b567850dc87fc3f33fe0134 384 Gene3D G3DSA:2.40.50.100 61 205 1.0E-87 T 14-10-2018 ABED_0101 f762d29dfa953b741e4dcbc5f56a9f0c 245 SUPERFAMILY SSF52540 3 227 1.66E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0101 f762d29dfa953b741e4dcbc5f56a9f0c 245 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0101 f762d29dfa953b741e4dcbc5f56a9f0c 245 SMART SM00382 28 218 3.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0101 f762d29dfa953b741e4dcbc5f56a9f0c 245 Pfam PF00005 ABC transporter 20 169 1.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0101 f762d29dfa953b741e4dcbc5f56a9f0c 245 Gene3D G3DSA:3.40.50.300 1 244 2.3E-58 T 14-10-2018 ABED_2001 4710118841ebc77351b291fab1032c5b 530 SMART SM00487 16 179 0.0045 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_2001 4710118841ebc77351b291fab1032c5b 530 Gene3D G3DSA:1.20.272.40 318 391 6.4E-121 T 14-10-2018 ABED_2001 4710118841ebc77351b291fab1032c5b 530 Gene3D G3DSA:3.40.50.300 18 171 6.4E-121 T 14-10-2018 ABED_2001 4710118841ebc77351b291fab1032c5b 530 Gene3D G3DSA:1.20.58.1080 394 497 6.4E-10 T 14-10-2018 ABED_2001 4710118841ebc77351b291fab1032c5b 530 Pfam PF00271 Helicase conserved C-terminal domain 186 291 4.8E-13 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_2001 4710118841ebc77351b291fab1032c5b 530 Gene3D G3DSA:3.40.50.300 172 317 6.4E-121 T 14-10-2018 ABED_2001 4710118841ebc77351b291fab1032c5b 530 SMART SM00490 203 291 1.6E-16 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_2001 4710118841ebc77351b291fab1032c5b 530 SUPERFAMILY SSF52540 33 294 7.96E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_2001 4710118841ebc77351b291fab1032c5b 530 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 441 484 2.0E-13 T 14-10-2018 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 ABED_1744 ff65802685e915e2edd5ac11902aaf84 132 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 6.0E-5 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABED_1744 ff65802685e915e2edd5ac11902aaf84 132 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 116 6.0E-5 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABED_1744 ff65802685e915e2edd5ac11902aaf84 132 SMART SM00226 2 129 1.5E-31 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABED_1744 ff65802685e915e2edd5ac11902aaf84 132 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 122 1.5E-21 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABED_1744 ff65802685e915e2edd5ac11902aaf84 132 SUPERFAMILY SSF52788 1 123 2.49E-35 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ABED_1744 ff65802685e915e2edd5ac11902aaf84 132 Gene3D G3DSA:3.40.50.2300 1 126 5.2E-36 T 14-10-2018 ABED_0464 4d02ddebe3d88d7f154be089500925b4 164 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 138 9.0E-56 T 14-10-2018 ABED_0464 4d02ddebe3d88d7f154be089500925b4 164 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 141 2.3E-63 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABED_0464 4d02ddebe3d88d7f154be089500925b4 164 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABED_0464 4d02ddebe3d88d7f154be089500925b4 164 SUPERFAMILY SSF52304 1 148 2.09E-59 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABED_0464 4d02ddebe3d88d7f154be089500925b4 164 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 164 67.665 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABED_0464 4d02ddebe3d88d7f154be089500925b4 164 Gene3D G3DSA:3.40.50.9100 1 145 5.0E-61 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABED_0464 4d02ddebe3d88d7f154be089500925b4 164 PIRSF PIRSF001399 1 145 1.7E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABED_0464 4d02ddebe3d88d7f154be089500925b4 164 Pfam PF01220 Dehydroquinase class II 2 138 6.3E-58 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABED_0113 ce805b10729045153b0250bf76f086b2 226 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 103 1.0E-17 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABED_0113 ce805b10729045153b0250bf76f086b2 226 SUPERFAMILY SSF101386 125 215 3.92E-24 T 14-10-2018 ABED_0113 ce805b10729045153b0250bf76f086b2 226 Gene3D G3DSA:1.10.287.1080 123 215 1.3E-28 T 14-10-2018 ABED_0113 ce805b10729045153b0250bf76f086b2 226 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 103 1.8E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABED_0113 ce805b10729045153b0250bf76f086b2 226 Gene3D G3DSA:3.10.20.400 2 94 9.3E-39 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ABED_0113 ce805b10729045153b0250bf76f086b2 226 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 5 214 35.027 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 ABED_0113 ce805b10729045153b0250bf76f086b2 226 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 123 209 17.717 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ABED_0113 ce805b10729045153b0250bf76f086b2 226 SUPERFAMILY SSF141734 5 112 2.35E-48 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ABED_0113 ce805b10729045153b0250bf76f086b2 226 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 107 30.504 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABED_0113 ce805b10729045153b0250bf76f086b2 226 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 127 209 1.3E-27 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ABED_0113 ce805b10729045153b0250bf76f086b2 226 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 128 212 3.2E-15 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 SUPERFAMILY SSF53671 1 290 7.46E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 292 37.635 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 Gene3D G3DSA:3.40.50.1370 6 286 6.8E-89 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 Gene3D G3DSA:3.40.50.1370 127 269 6.8E-89 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 208 217 2.8E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 285 2.8E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 247 252 2.8E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 2.8E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 2.8E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 2.8E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 140 4.0E-43 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 2.1E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 243 252 2.1E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 278 2.1E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 2.1E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 290 4.4E-94 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_0244 bc277b043ef64aa9c546d65604aea8ce 295 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 287 3.6E-23 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 Gene3D G3DSA:3.30.450.20 63 163 4.9E-12 T 14-10-2018 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 397 1.0E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 1.0E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 1.0E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 472 1.0E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 SUPERFAMILY SSF58104 273 593 2.75E-50 T 14-10-2018 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 SMART SM00283 347 594 2.1E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 562 2.7E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 Gene3D G3DSA:1.10.287.950 292 594 3.1E-55 T 14-10-2018 ABED_1551 894cbcb291a99c92b0e4010db6ae10fe 595 Pfam PF17201 Cache 3/Cache 2 fusion domain 67 158 5.4E-16 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 Gene3D G3DSA:3.10.20.600 230 325 2.9E-31 T 14-10-2018 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 Gene3D G3DSA:1.20.1440.230 326 416 1.4E-28 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 SUPERFAMILY SSF140490 324 416 9.94E-30 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 SUPERFAMILY SSF142019 4 238 4.32E-69 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 SUPERFAMILY SSF142984 240 323 7.72E-21 T 14-10-2018 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 330 412 4.5E-27 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 SMART SM00928 328 373 1.5E-24 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 45 217 5.8E-45 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 Gene3D G3DSA:3.40.50.11540 50 229 2.8E-63 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 Pfam PF10531 SLBB domain 241 290 5.5E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0294 2cf760d3977db98f9e752e58fc7ab4f0 416 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 341 352 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1945 383487378193b05a5b0f448642562c4e 196 Gene3D G3DSA:1.20.1440.20 16 196 1.1E-59 T 14-10-2018 IPR023353 LemA-like domain superfamily ABED_1945 383487378193b05a5b0f448642562c4e 196 SUPERFAMILY SSF140478 27 175 1.19E-49 T 14-10-2018 IPR023353 LemA-like domain superfamily ABED_1945 383487378193b05a5b0f448642562c4e 196 Pfam PF04011 LemA family 10 196 2.2E-63 T 14-10-2018 IPR007156 LemA ABED_1457 7e03bb28308bff01508e613da363b969 778 SMART SM00965 48 98 0.0013 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABED_1457 7e03bb28308bff01508e613da363b969 778 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 143 778 1.9E-88 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_1457 7e03bb28308bff01508e613da363b969 778 SUPERFAMILY SSF56935 107 778 1.63E-94 T 14-10-2018 ABED_1457 7e03bb28308bff01508e613da363b969 778 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 761 778 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site ABED_1457 7e03bb28308bff01508e613da363b969 778 Gene3D G3DSA:2.40.170.20 251 778 4.3E-81 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1457 7e03bb28308bff01508e613da363b969 778 Gene3D G3DSA:2.170.130.10 119 250 1.0E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_1457 7e03bb28308bff01508e613da363b969 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 242 6.6E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1457 7e03bb28308bff01508e613da363b969 778 Gene3D G3DSA:3.55.50.30 22 118 1.9E-8 T 14-10-2018 ABED_0593 a86d2c72be9970b77550ad989617028d 260 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 13 225 1.7E-40 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABED_0593 a86d2c72be9970b77550ad989617028d 260 SUPERFAMILY SSF51306 24 239 8.37E-57 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABED_0593 a86d2c72be9970b77550ad989617028d 260 Gene3D G3DSA:2.10.109.10 25 225 5.8E-53 T 14-10-2018 ABED_0593 a86d2c72be9970b77550ad989617028d 260 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 102 114 4.8E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABED_0593 a86d2c72be9970b77550ad989617028d 260 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 185 204 4.8E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABED_0593 a86d2c72be9970b77550ad989617028d 260 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 4.8E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABED_0593 a86d2c72be9970b77550ad989617028d 260 Gene3D G3DSA:2.170.230.10 113 184 5.8E-53 T 14-10-2018 ABED_0593 a86d2c72be9970b77550ad989617028d 260 Pfam PF00717 Peptidase S24-like 32 120 1.3E-16 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABED_0593 a86d2c72be9970b77550ad989617028d 260 ProSitePatterns PS00760 Signal peptidases I lysine active site. 104 116 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 ABED_1897 4806b195d33cf311e21eb6069d25084c 105 PRINTS PR00421 Thioredoxin family signature 21 29 3.6E-8 T 14-10-2018 ABED_1897 4806b195d33cf311e21eb6069d25084c 105 PRINTS PR00421 Thioredoxin family signature 29 38 3.6E-8 T 14-10-2018 ABED_1897 4806b195d33cf311e21eb6069d25084c 105 PRINTS PR00421 Thioredoxin family signature 69 80 3.6E-8 T 14-10-2018 ABED_1897 4806b195d33cf311e21eb6069d25084c 105 SUPERFAMILY SSF52833 2 105 8.21E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1897 4806b195d33cf311e21eb6069d25084c 105 Gene3D G3DSA:3.40.30.10 2 105 2.9E-35 T 14-10-2018 ABED_1897 4806b195d33cf311e21eb6069d25084c 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABED_1897 4806b195d33cf311e21eb6069d25084c 105 Pfam PF00085 Thioredoxin 5 102 4.6E-30 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABED_1897 4806b195d33cf311e21eb6069d25084c 105 PIRSF PIRSF000077 1 105 4.2E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABED_1897 4806b195d33cf311e21eb6069d25084c 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 9.0E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABED_1472 b5b1518918ebc61d49b5fded449a9f7e 195 SUPERFAMILY SSF54534 3 138 8.05E-30 T 14-10-2018 ABED_1472 b5b1518918ebc61d49b5fded449a9f7e 195 Gene3D G3DSA:2.40.10.330 71 122 5.2E-27 T 14-10-2018 ABED_1472 b5b1518918ebc61d49b5fded449a9f7e 195 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 81 3.1E-11 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABED_0650 25d72b02b0bb75bb6a871fafc65bf868 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 90 104 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_0650 25d72b02b0bb75bb6a871fafc65bf868 402 SUPERFAMILY SSF53686 13 394 1.01E-143 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABED_0650 25d72b02b0bb75bb6a871fafc65bf868 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 395 8.5E-189 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_0650 25d72b02b0bb75bb6a871fafc65bf868 402 Gene3D G3DSA:3.40.50.1100 64 392 8.1E-179 T 14-10-2018 ABED_0650 25d72b02b0bb75bb6a871fafc65bf868 402 Gene3D G3DSA:3.40.50.1100 20 215 8.1E-179 T 14-10-2018 ABED_0650 25d72b02b0bb75bb6a871fafc65bf868 402 PIRSF PIRSF001413 7 402 3.7E-160 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_0650 25d72b02b0bb75bb6a871fafc65bf868 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 386 8.8E-47 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABED_0650 25d72b02b0bb75bb6a871fafc65bf868 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 399 51.226 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1003 01e3e1e1a79c19956dd2c512d4ee6dc6 276 SUPERFAMILY SSF53850 16 233 6.25E-25 T 14-10-2018 ABED_1003 01e3e1e1a79c19956dd2c512d4ee6dc6 276 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 15 244 1.7E-28 T 14-10-2018 ABED_1003 01e3e1e1a79c19956dd2c512d4ee6dc6 276 Gene3D G3DSA:3.40.190.10 31 229 2.4E-23 T 14-10-2018 ABED_1003 01e3e1e1a79c19956dd2c512d4ee6dc6 276 Gene3D G3DSA:3.40.190.10 86 204 2.4E-23 T 14-10-2018 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 169 189 1.1E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 81 100 1.1E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 190 211 1.1E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 214 239 1.1E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 61 1.1E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 61 81 1.1E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 Pfam PF00813 FliP family 44 236 5.1E-77 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 44 240 7.2E-82 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 169 184 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_0941 352ce7189470d95f39e5b00f8ace1389 241 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 217 229 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABED_1511 70e1f3e6489f3136baf2df2987aa06a4 104 Gene3D G3DSA:3.30.70.930 1 98 3.7E-25 T 14-10-2018 IPR029756 MTH1187/YkoF-like ABED_1511 70e1f3e6489f3136baf2df2987aa06a4 104 SUPERFAMILY SSF89957 3 99 1.57E-24 T 14-10-2018 IPR029756 MTH1187/YkoF-like ABED_1511 70e1f3e6489f3136baf2df2987aa06a4 104 Pfam PF01910 Thiamine-binding protein 7 96 2.8E-21 T 14-10-2018 IPR002767 Thiamine-binding protein ABED_1511 70e1f3e6489f3136baf2df2987aa06a4 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 6 99 6.1E-17 T 14-10-2018 IPR002767 Thiamine-binding protein ABED_0965 8d053beed4766f288e8b256299848113 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.4E-80 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABED_0965 8d053beed4766f288e8b256299848113 208 SMART SM01390 3 97 2.6E-44 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ABED_0965 8d053beed4766f288e8b256299848113 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 4.9E-29 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ABED_0965 8d053beed4766f288e8b256299848113 208 Gene3D G3DSA:3.10.290.10 97 193 8.7E-80 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABED_0965 8d053beed4766f288e8b256299848113 208 SMART SM00363 98 162 5.9E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0965 8d053beed4766f288e8b256299848113 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.638 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABED_0965 8d053beed4766f288e8b256299848113 208 Pfam PF01479 S4 domain 98 145 2.2E-17 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0965 8d053beed4766f288e8b256299848113 208 Gene3D G3DSA:1.10.1050.10 6 208 8.7E-80 T 14-10-2018 ABED_0965 8d053beed4766f288e8b256299848113 208 SUPERFAMILY SSF55174 2 208 1.5E-69 T 14-10-2018 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 58 119 2.0E-8 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 313 320 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 Gene3D G3DSA:3.40.630.10 135 470 3.5E-126 T 14-10-2018 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 Gene3D G3DSA:3.40.220.10 24 134 1.5E-10 T 14-10-2018 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 PRINTS PR00481 Cytosol aminopeptidase signature 339 354 3.2E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 3.2E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 3.2E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 PRINTS PR00481 Cytosol aminopeptidase signature 309 329 3.2E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 PRINTS PR00481 Cytosol aminopeptidase signature 228 245 3.2E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 SUPERFAMILY SSF52949 32 133 2.06E-10 T 14-10-2018 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 153 461 3.5E-107 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 SUPERFAMILY SSF53187 148 468 2.67E-104 T 14-10-2018 ABED_0652 216b633f04ce16cf9b8386391f352e07 470 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 470 30.337 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 ABED_0295 14e9bc0095f0c663c7b492790fa87b44 161 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 115 133 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0295 14e9bc0095f0c663c7b492790fa87b44 161 Gene3D G3DSA:1.10.10.1590 4 74 5.5E-26 T 14-10-2018 ABED_0295 14e9bc0095f0c663c7b492790fa87b44 161 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 157 9.0E-55 T 14-10-2018 ABED_0295 14e9bc0095f0c663c7b492790fa87b44 161 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 15 155 1.7E-49 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0295 14e9bc0095f0c663c7b492790fa87b44 161 Gene3D G3DSA:3.40.30.10 75 156 1.3E-25 T 14-10-2018 ABED_0295 14e9bc0095f0c663c7b492790fa87b44 161 PIRSF PIRSF000216 1 161 3.1E-58 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0295 14e9bc0095f0c663c7b492790fa87b44 161 SUPERFAMILY SSF52833 8 158 8.28E-51 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1380 aedd78a87971aa61ea690af14f74104d 435 SMART SM00490 258 339 7.2E-30 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1380 aedd78a87971aa61ea690af14f74104d 435 Pfam PF00270 DEAD/DEAH box helicase 25 196 2.0E-52 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABED_1380 aedd78a87971aa61ea690af14f74104d 435 SMART SM00487 20 222 2.1E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_1380 aedd78a87971aa61ea690af14f74104d 435 Pfam PF00271 Helicase conserved C-terminal domain 231 338 2.4E-27 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1380 aedd78a87971aa61ea690af14f74104d 435 SUPERFAMILY SSF52540 75 359 2.31E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1380 aedd78a87971aa61ea690af14f74104d 435 Gene3D G3DSA:3.40.50.300 216 415 3.4E-47 T 14-10-2018 ABED_1380 aedd78a87971aa61ea690af14f74104d 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABED_1380 aedd78a87971aa61ea690af14f74104d 435 Gene3D G3DSA:3.40.50.300 1 211 2.6E-80 T 14-10-2018 ABED_2105 df7c2f8060c5497e70a65d970e1c8f33 1122 Pfam PF01841 Transglutaminase-like superfamily 130 245 3.6E-19 T 14-10-2018 IPR002931 Transglutaminase-like ABED_2105 df7c2f8060c5497e70a65d970e1c8f33 1122 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 82 4.1E-27 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal ABED_2105 df7c2f8060c5497e70a65d970e1c8f33 1122 SMART SM00460 172 248 1.6E-19 T 14-10-2018 IPR002931 Transglutaminase-like ABED_2105 df7c2f8060c5497e70a65d970e1c8f33 1122 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1116 0.0 T 14-10-2018 IPR018667 Domain of unknown function DUF2126 ABED_2105 df7c2f8060c5497e70a65d970e1c8f33 1122 SUPERFAMILY SSF54001 9 337 6.03E-71 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_2105 df7c2f8060c5497e70a65d970e1c8f33 1122 Gene3D G3DSA:3.10.620.30 93 280 1.4E-25 T 14-10-2018 ABED_1456 93813461a72fea2a6baf956c8db157fe 219 SUPERFAMILY SSF53335 40 199 1.51E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1456 93813461a72fea2a6baf956c8db157fe 219 Gene3D G3DSA:3.40.50.150 24 208 1.3E-32 T 14-10-2018 ABED_1456 93813461a72fea2a6baf956c8db157fe 219 Pfam PF10294 Lysine methyltransferase 50 187 1.2E-15 T 14-10-2018 IPR019410 Lysine methyltransferase ABED_1639 8db316a3e05bb92a8c5fd335a3b3ed65 372 SUPERFAMILY SSF52266 79 355 6.99E-6 T 14-10-2018 ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 SUPERFAMILY SSF55874 379 516 5.5E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 Pfam PF00512 His Kinase A (phospho-acceptor) domain 313 368 2.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 Gene3D G3DSA:1.10.287.130 297 373 1.3E-8 T 14-10-2018 ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 Gene3D G3DSA:3.30.565.10 374 525 1.4E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 SMART SM01049 45 140 8.2E-18 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 SMART SM00388 312 374 5.3E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 520 2.3E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 SMART SM00387 417 523 2.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 SUPERFAMILY SSF47384 298 371 3.53E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 Gene3D G3DSA:3.30.450.20 33 214 2.7E-33 T 14-10-2018 ABED_0483 124ce53ad0418ba9bce7fecf900c3cf6 527 Pfam PF17200 Single Cache domain 2 52 194 2.0E-30 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_0249 6e682ddd5a117ea2b4be0bb29cab95a7 184 SMART SM00782 6 51 4.4E-15 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial ABED_0249 6e682ddd5a117ea2b4be0bb29cab95a7 184 SUPERFAMILY SSF82057 113 183 3.57E-24 T 14-10-2018 ABED_0249 6e682ddd5a117ea2b4be0bb29cab95a7 184 Gene3D G3DSA:2.30.30.40 114 184 1.2E-29 T 14-10-2018 ABED_0249 6e682ddd5a117ea2b4be0bb29cab95a7 184 Pfam PF03831 PhnA domain 118 183 2.0E-27 T 14-10-2018 IPR013988 PhnA protein, C-terminal ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 9.9E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Pfam PF00873 AcrB/AcrD/AcrF family 2 1024 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Gene3D G3DSA:3.30.70.1440 667 864 0.0 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Gene3D G3DSA:1.20.1640.10 511 1021 0.0 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 SUPERFAMILY SSF82693 41 130 5.93E-24 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 SUPERFAMILY SSF82866 829 1024 1.96E-43 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 SUPERFAMILY SSF82693 672 855 2.44E-24 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 SUPERFAMILY SSF82693 563 669 1.2E-19 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Gene3D G3DSA:1.20.1640.10 9 510 0.0 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 SUPERFAMILY SSF82714 720 803 6.41E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Gene3D G3DSA:3.30.2090.10 719 807 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Gene3D G3DSA:3.30.70.1430 565 666 0.0 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Gene3D G3DSA:3.30.70.1430 39 815 0.0 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1035 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 SUPERFAMILY SSF82714 184 273 4.19E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 SUPERFAMILY SSF82693 137 332 6.63E-25 T 14-10-2018 ABED_0742 bdb063ab6dac960594f9703f43fdabeb 1042 SUPERFAMILY SSF82866 298 497 2.09E-55 T 14-10-2018 ABED_1049 4e645fc3dd4196c7ee1c720d73d5f00a 452 Pfam PF00999 Sodium/hydrogen exchanger family 54 442 9.4E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABED_1049 4e645fc3dd4196c7ee1c720d73d5f00a 452 Gene3D G3DSA:1.20.1530.20 47 452 7.1E-95 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily ABED_0394 01c351d0e02dbe3a61acd3b80d53b403 680 Gene3D G3DSA:3.30.450.20 302 453 2.4E-28 T 14-10-2018 ABED_0394 01c351d0e02dbe3a61acd3b80d53b403 680 SMART SM00086 384 426 9.7E-4 T 14-10-2018 IPR001610 PAC motif ABED_0394 01c351d0e02dbe3a61acd3b80d53b403 680 SMART SM00091 310 378 5.2E-7 T 14-10-2018 IPR000014 PAS domain ABED_0394 01c351d0e02dbe3a61acd3b80d53b403 680 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 310 430 9.7E-17 T 14-10-2018 IPR000014 PAS domain ABED_0394 01c351d0e02dbe3a61acd3b80d53b403 680 SUPERFAMILY SSF55785 326 423 5.93E-25 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0394 01c351d0e02dbe3a61acd3b80d53b403 680 Pfam PF08447 PAS fold 335 416 7.8E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_0394 01c351d0e02dbe3a61acd3b80d53b403 680 SUPERFAMILY SSF55874 502 620 2.51E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0394 01c351d0e02dbe3a61acd3b80d53b403 680 Gene3D G3DSA:3.30.565.10 530 679 1.2E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1964 0c6f81107d4f8cede27f1fa8fa4ac0b8 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 421 6.0E-127 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABED_1964 0c6f81107d4f8cede27f1fa8fa4ac0b8 423 Gene3D G3DSA:3.90.1150.10 287 423 3.5E-49 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1964 0c6f81107d4f8cede27f1fa8fa4ac0b8 423 Gene3D G3DSA:3.40.640.10 1 286 8.6E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1964 0c6f81107d4f8cede27f1fa8fa4ac0b8 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 421 2.0E-172 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 ABED_1964 0c6f81107d4f8cede27f1fa8fa4ac0b8 423 SUPERFAMILY SSF53383 1 422 7.31E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1964 0c6f81107d4f8cede27f1fa8fa4ac0b8 423 PIRSF PIRSF001434 1 423 3.6E-122 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 Gene3D G3DSA:3.55.50.30 17 105 2.0E-13 T 14-10-2018 ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 PRINTS PR00811 Bacterial general secretion pathway protein D signature 378 396 2.0E-18 T 14-10-2018 IPR001775 GspD/PilQ family ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 PRINTS PR00811 Bacterial general secretion pathway protein D signature 247 271 2.0E-18 T 14-10-2018 IPR001775 GspD/PilQ family ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 PRINTS PR00811 Bacterial general secretion pathway protein D signature 175 185 2.0E-18 T 14-10-2018 IPR001775 GspD/PilQ family ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 PRINTS PR00811 Bacterial general secretion pathway protein D signature 401 415 2.0E-18 T 14-10-2018 IPR001775 GspD/PilQ family ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 Gene3D G3DSA:3.30.1370.120 106 172 2.1E-10 T 14-10-2018 IPR038591 NolW-like superfamily ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 Pfam PF00263 Bacterial type II and III secretion system protein 251 413 1.2E-42 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 359 392 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ABED_1666 299ee6cd2718e82c2ce2b343bf25259f 478 Pfam PF03958 Bacterial type II/III secretion system short domain 107 175 1.4E-7 T 14-10-2018 IPR005644 NolW-like ABED_0666 21693bd3aa388e9c2447b2f2809f9c9a 227 Gene3D G3DSA:1.20.1260.10 24 174 4.2E-10 T 14-10-2018 IPR012347 Ferritin-like ABED_0666 21693bd3aa388e9c2447b2f2809f9c9a 227 SUPERFAMILY SSF47240 26 145 3.38E-14 T 14-10-2018 IPR009078 Ferritin-like superfamily ABED_0666 21693bd3aa388e9c2447b2f2809f9c9a 227 Pfam PF09968 Uncharacterized protein domain (DUF2202) 34 148 2.0E-5 T 14-10-2018 IPR019243 Domain of unknown function DUF2202 ABED_2076 730dfdb5adb9108e205b05993646b68d 87 Pfam PF04359 Protein of unknown function (DUF493) 11 86 1.3E-16 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 ABED_2076 730dfdb5adb9108e205b05993646b68d 87 Gene3D G3DSA:3.30.70.260 15 87 3.1E-15 T 14-10-2018 ABED_2076 730dfdb5adb9108e205b05993646b68d 87 SUPERFAMILY SSF117991 6 87 4.19E-23 T 14-10-2018 IPR027471 YbeD-like domain superfamily ABED_2076 730dfdb5adb9108e205b05993646b68d 87 ProDom PD061650 JHP0447 HP0495 CJ0253 12 87 1.0E-12 T 14-10-2018 ABED_1545 c9d2a07e2b0d636ca490c180938a6779 1091 Pfam PF04851 Type III restriction enzyme, res subunit 126 297 2.5E-22 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABED_1545 c9d2a07e2b0d636ca490c180938a6779 1091 Gene3D G3DSA:3.40.50.300 117 319 9.7E-25 T 14-10-2018 ABED_1545 c9d2a07e2b0d636ca490c180938a6779 1091 SUPERFAMILY SSF52540 139 456 1.12E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1545 c9d2a07e2b0d636ca490c180938a6779 1091 SMART SM00487 124 329 4.8E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_1545 c9d2a07e2b0d636ca490c180938a6779 1091 Gene3D G3DSA:3.40.50.300 325 495 7.1E-14 T 14-10-2018 ABED_1545 c9d2a07e2b0d636ca490c180938a6779 1091 Pfam PF00271 Helicase conserved C-terminal domain 370 452 7.2E-5 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 PIRSF PIRSF000114 1 42 0.021 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 PIRSF PIRSF000114 30 298 5.5E-71 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 153 289 1.4E-44 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 SUPERFAMILY SSF51735 2 150 9.4E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 Gene3D G3DSA:3.40.50.720 23 161 5.0E-25 T 14-10-2018 ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 Gene3D G3DSA:1.10.1040.10 162 298 6.1E-44 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 294 29.406 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 36 133 7.3E-18 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 161 182 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABED_0029 50b55db629e35f8a00bc54b5fe563fe9 298 SUPERFAMILY SSF48179 152 296 1.38E-44 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABED_0518 e6277ee606ba4fdb1b0921cf7adc5068 205 SMART SM00072 5 188 1.7E-63 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ABED_0518 e6277ee606ba4fdb1b0921cf7adc5068 205 Gene3D G3DSA:3.30.63.10 37 96 5.3E-66 T 14-10-2018 ABED_0518 e6277ee606ba4fdb1b0921cf7adc5068 205 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 ABED_0518 e6277ee606ba4fdb1b0921cf7adc5068 205 Hamap MF_00328 Guanylate kinase [gmk]. 4 188 35.467 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ABED_0518 e6277ee606ba4fdb1b0921cf7adc5068 205 SUPERFAMILY SSF52540 3 186 1.89E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0518 e6277ee606ba4fdb1b0921cf7adc5068 205 Gene3D G3DSA:3.40.50.300 10 183 5.3E-66 T 14-10-2018 ABED_0518 e6277ee606ba4fdb1b0921cf7adc5068 205 Pfam PF00625 Guanylate kinase 8 182 2.4E-50 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ABED_0518 e6277ee606ba4fdb1b0921cf7adc5068 205 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 7 184 5.5E-72 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ABED_1774 04a06b7bfa3019bcc6a0b07b0895047c 239 SUPERFAMILY SSF117143 89 179 2.62E-10 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABED_1774 04a06b7bfa3019bcc6a0b07b0895047c 239 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 160 227 5.2E-15 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABED_1774 04a06b7bfa3019bcc6a0b07b0895047c 239 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 10 136 1.1E-25 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABED_1774 04a06b7bfa3019bcc6a0b07b0895047c 239 Pfam PF00460 Flagella basal body rod protein 12 35 4.3E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABED_0298 e18e3a4ed513dd9fe049a40039d7d1ad 120 Gene3D G3DSA:1.20.58.1610 1 120 6.2E-35 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0298 e18e3a4ed513dd9fe049a40039d7d1ad 120 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 120 16.482 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 ABED_0298 e18e3a4ed513dd9fe049a40039d7d1ad 120 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 119 7.8E-31 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1171 5305f812891f94baafd29d4f1a64aae5 118 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 1.2E-20 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 ABED_1171 5305f812891f94baafd29d4f1a64aae5 118 Pfam PF02416 mttA/Hcf106 family 4 49 7.7E-6 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ABED_1171 5305f812891f94baafd29d4f1a64aae5 118 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.1E-13 T 14-10-2018 ABED_1171 5305f812891f94baafd29d4f1a64aae5 118 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.1E-13 T 14-10-2018 ABED_1171 5305f812891f94baafd29d4f1a64aae5 118 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.1E-13 T 14-10-2018 ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 Gene3D G3DSA:1.10.8.60 266 334 5.0E-19 T 14-10-2018 ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 SUPERFAMILY SSF48295 330 434 5.23E-30 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 Pfam PF11638 DnaA N-terminal domain 5 63 3.6E-6 T 14-10-2018 IPR024633 DnaA N-terminal domain ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 179 2.3E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 231 258 2.3E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 2.3E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 393 412 2.3E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 135 155 2.3E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 Gene3D G3DSA:1.10.1750.10 335 437 4.9E-28 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 Pfam PF00308 Bacterial dnaA protein 102 316 4.2E-88 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 SMART SM00760 343 412 3.2E-28 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 Gene3D G3DSA:3.40.50.300 86 264 9.5E-55 T 14-10-2018 ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 SUPERFAMILY SSF52540 103 311 1.38E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 433 6.2E-150 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 Gene3D G3DSA:3.30.300.180 1 85 3.2E-8 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 SMART SM00382 134 260 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 346 411 7.5E-23 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ABED_0001 b1047c723a82b9b89f5348dd2e9942d4 438 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 434 29.34 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ABED_0234 52c65384597fd6f9460fc70f181c2b3c 353 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 46 350 5.2E-118 T 14-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 ABED_0234 52c65384597fd6f9460fc70f181c2b3c 353 Pfam PF04055 Radical SAM superfamily 53 223 1.4E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_0234 52c65384597fd6f9460fc70f181c2b3c 353 PIRSF PIRSF004762 1 353 8.2E-104 T 14-10-2018 ABED_0234 52c65384597fd6f9460fc70f181c2b3c 353 SUPERFAMILY SSF102114 15 342 2.22E-44 T 14-10-2018 ABED_0234 52c65384597fd6f9460fc70f181c2b3c 353 Gene3D G3DSA:3.20.20.70 1 334 1.9E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0234 52c65384597fd6f9460fc70f181c2b3c 353 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 1 353 49.017 T 14-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 ABED_0234 52c65384597fd6f9460fc70f181c2b3c 353 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 3 350 3.8E-148 T 14-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 ABED_2103 3b08a761824e59c4afd5b3e64596d7a2 786 SMART SM00283 492 741 1.9E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_2103 3b08a761824e59c4afd5b3e64596d7a2 786 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 553 705 2.6E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_2103 3b08a761824e59c4afd5b3e64596d7a2 786 Gene3D G3DSA:3.30.450.20 170 315 3.8E-16 T 14-10-2018 ABED_2103 3b08a761824e59c4afd5b3e64596d7a2 786 Pfam PF17201 Cache 3/Cache 2 fusion domain 31 312 3.8E-85 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain ABED_2103 3b08a761824e59c4afd5b3e64596d7a2 786 SUPERFAMILY SSF103190 108 206 1.0E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABED_2103 3b08a761824e59c4afd5b3e64596d7a2 786 Gene3D G3DSA:1.10.287.950 442 737 6.6E-56 T 14-10-2018 ABED_2103 3b08a761824e59c4afd5b3e64596d7a2 786 SUPERFAMILY SSF58104 370 730 2.09E-51 T 14-10-2018 ABED_1414 b1c01caa73ac71f21da5a953881ba709 209 ProDom PD104924 XAC1607 AF0417 5 190 8.0E-49 T 14-10-2018 ABED_1414 b1c01caa73ac71f21da5a953881ba709 209 Pfam PF11655 Protein of unknown function (DUF2589) 13 187 8.1E-52 T 14-10-2018 IPR024510 Protein of unknown function DUF2589 ABED_0590 9e4dcc6b40ea3552d291655eb95eed86 326 PIRSF PIRSF018688 5 326 1.9E-87 T 14-10-2018 IPR016732 Uncharacterised conserved protein UCP018688 ABED_0590 9e4dcc6b40ea3552d291655eb95eed86 326 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 34 324 1.1E-28 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal ABED_0590 9e4dcc6b40ea3552d291655eb95eed86 326 SUPERFAMILY SSF55729 154 326 3.81E-43 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0590 9e4dcc6b40ea3552d291655eb95eed86 326 Gene3D G3DSA:3.40.630.30 15 321 1.3E-65 T 14-10-2018 ABED_0590 9e4dcc6b40ea3552d291655eb95eed86 326 Gene3D G3DSA:3.40.630.30 141 319 1.3E-65 T 14-10-2018 ABED_0590 9e4dcc6b40ea3552d291655eb95eed86 326 SUPERFAMILY SSF55729 15 153 9.85E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0596 9d58ee6a6678a7dabb0ed00ba09c9a30 183 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 104 114 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ABED_0596 9d58ee6a6678a7dabb0ed00ba09c9a30 183 SUPERFAMILY SSF53178 1 180 1.44E-62 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ABED_0596 9d58ee6a6678a7dabb0ed00ba09c9a30 183 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 174 33.879 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABED_0596 9d58ee6a6678a7dabb0ed00ba09c9a30 183 Pfam PF01195 Peptidyl-tRNA hydrolase 3 180 8.9E-57 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABED_0596 9d58ee6a6678a7dabb0ed00ba09c9a30 183 Gene3D G3DSA:3.40.50.1470 1 183 1.5E-65 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ABED_0596 9d58ee6a6678a7dabb0ed00ba09c9a30 183 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ABED_0596 9d58ee6a6678a7dabb0ed00ba09c9a30 183 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 180 1.1E-58 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABED_0481 8ffc861d82685306971f7fe34671399e 84 Pfam PF13937 Domain of unknown function (DUF4212) 7 82 8.2E-32 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted ABED_0481 8ffc861d82685306971f7fe34671399e 84 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 8 84 6.8E-32 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted ABED_1043 8d9243ffe6608280cdf92e59b6731968 236 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 215 8.3E-52 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain ABED_0947 e7fc3aae26f732473151682c5edc20ec 397 Pfam PF02390 Putative methyltransferase 127 287 7.7E-38 T 14-10-2018 ABED_0947 e7fc3aae26f732473151682c5edc20ec 397 SUPERFAMILY SSF53335 119 289 1.67E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0947 e7fc3aae26f732473151682c5edc20ec 397 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 112 278 1.2E-43 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ABED_0947 e7fc3aae26f732473151682c5edc20ec 397 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 64 293 25.703 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ABED_0947 e7fc3aae26f732473151682c5edc20ec 397 Gene3D G3DSA:3.40.50.150 91 290 2.3E-42 T 14-10-2018 ABED_0841 d0658a1ef171abb1296f0147535c2338 309 SUPERFAMILY SSF52540 96 303 1.72E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0841 d0658a1ef171abb1296f0147535c2338 309 Gene3D G3DSA:1.20.120.140 25 301 1.0E-95 T 14-10-2018 ABED_0841 d0658a1ef171abb1296f0147535c2338 309 SMART SM00382 101 284 0.0026 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0841 d0658a1ef171abb1296f0147535c2338 309 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 45 303 55.129 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ABED_0841 d0658a1ef171abb1296f0147535c2338 309 Pfam PF00448 SRP54-type protein, GTPase domain 103 302 1.3E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_0841 d0658a1ef171abb1296f0147535c2338 309 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 276 289 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_0841 d0658a1ef171abb1296f0147535c2338 309 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 45 302 1.0E-96 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ABED_0841 d0658a1ef171abb1296f0147535c2338 309 Gene3D G3DSA:3.40.50.300 93 291 1.0E-95 T 14-10-2018 ABED_0841 d0658a1ef171abb1296f0147535c2338 309 SMART SM00962 102 303 1.1E-106 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABED_2138 18c0e3d494b4acb13177ed8b511bab60 315 PIRSF PIRSF018266 2 315 4.0E-53 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ABED_2138 18c0e3d494b4acb13177ed8b511bab60 315 Gene3D G3DSA:3.55.50.30 240 315 2.0E-7 T 14-10-2018 ABED_2138 18c0e3d494b4acb13177ed8b511bab60 315 Gene3D G3DSA:2.60.120.1440 101 238 6.6E-25 T 14-10-2018 ABED_2138 18c0e3d494b4acb13177ed8b511bab60 315 Pfam PF16344 Domain of unknown function (DUF4974) 213 309 1.1E-7 T 14-10-2018 IPR032508 Protein FecR, C-terminal ABED_2138 18c0e3d494b4acb13177ed8b511bab60 315 Pfam PF04773 FecR protein 117 200 3.0E-20 T 14-10-2018 IPR006860 FecR protein ABED_2066 97e1a7ae9f3fa4fab93d52194d6763f8 460 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 251 262 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_2066 97e1a7ae9f3fa4fab93d52194d6763f8 460 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 334 454 2.7E-18 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain ABED_2066 97e1a7ae9f3fa4fab93d52194d6763f8 460 SUPERFAMILY SSF54862 78 305 2.01E-19 T 14-10-2018 ABED_2066 97e1a7ae9f3fa4fab93d52194d6763f8 460 Gene3D G3DSA:3.30.70.20 194 274 6.3E-7 T 14-10-2018 ABED_2066 97e1a7ae9f3fa4fab93d52194d6763f8 460 Gene3D G3DSA:2.60.40.10 341 453 1.7E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_2066 97e1a7ae9f3fa4fab93d52194d6763f8 460 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 13 454 6.4E-147 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 ABED_2066 97e1a7ae9f3fa4fab93d52194d6763f8 460 Pfam PF12801 4Fe-4S binding domain 66 110 6.5E-15 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_2066 97e1a7ae9f3fa4fab93d52194d6763f8 460 Pfam PF13746 4Fe-4S dicluster domain 193 302 4.8E-48 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 596 7.1E-86 T 14-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 SUPERFAMILY SSF50447 173 260 2.59E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 Gene3D G3DSA:2.40.30.10 174 292 1.5E-20 T 14-10-2018 ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 Pfam PF09107 Elongation factor SelB, winged helix 563 607 4.2E-11 T 14-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 133 8.7E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 Gene3D G3DSA:3.40.50.300 1 173 8.0E-44 T 14-10-2018 ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 Pfam PF00009 Elongation factor Tu GTP binding domain 4 142 4.3E-28 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 Gene3D G3DSA:1.10.10.10 551 609 1.7E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 SUPERFAMILY SSF52540 4 192 5.14E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1422 83a445f6077d0e9e6c2f3a97d3b196fd 609 SUPERFAMILY SSF46785 558 608 8.43E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0601 7cbfe233498e6945169df2b75a799385 402 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 10 401 7.5E-127 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABED_0601 7cbfe233498e6945169df2b75a799385 402 Gene3D G3DSA:3.10.290.10 330 400 5.2E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABED_0601 7cbfe233498e6945169df2b75a799385 402 Pfam PF01479 S4 domain 347 385 5.7E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0601 7cbfe233498e6945169df2b75a799385 402 Gene3D G3DSA:3.40.50.620 6 223 1.0E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0601 7cbfe233498e6945169df2b75a799385 402 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 57 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0601 7cbfe233498e6945169df2b75a799385 402 SUPERFAMILY SSF52374 12 323 1.35E-86 T 14-10-2018 ABED_0601 7cbfe233498e6945169df2b75a799385 402 Gene3D G3DSA:1.10.240.10 228 329 6.4E-22 T 14-10-2018 ABED_0601 7cbfe233498e6945169df2b75a799385 402 Pfam PF00579 tRNA synthetases class I (W and Y) 37 323 1.9E-79 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0601 7cbfe233498e6945169df2b75a799385 402 SMART SM00363 342 402 0.0083 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0601 7cbfe233498e6945169df2b75a799385 402 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 3 401 44.461 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 ABED_0601 7cbfe233498e6945169df2b75a799385 402 SUPERFAMILY SSF55174 306 401 1.09E-14 T 14-10-2018 ABED_0601 7cbfe233498e6945169df2b75a799385 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 51 73 1.4E-21 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABED_0601 7cbfe233498e6945169df2b75a799385 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 1.4E-21 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABED_0601 7cbfe233498e6945169df2b75a799385 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 1.4E-21 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABED_0601 7cbfe233498e6945169df2b75a799385 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 1.4E-21 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABED_1677 9713bed2d53aeebf5eef35b5c3b65b41 294 Pfam PF00892 EamA-like transporter family 148 291 6.9E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_1677 9713bed2d53aeebf5eef35b5c3b65b41 294 Pfam PF00892 EamA-like transporter family 7 136 1.1E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_1677 9713bed2d53aeebf5eef35b5c3b65b41 294 SUPERFAMILY SSF103481 41 137 7.85E-16 T 14-10-2018 ABED_1677 9713bed2d53aeebf5eef35b5c3b65b41 294 SUPERFAMILY SSF103481 206 292 2.22E-8 T 14-10-2018 ABED_2115 9411be4f68fe95ab6c4450dde2f8a480 405 Gene3D G3DSA:3.40.50.1100 109 205 8.1E-108 T 14-10-2018 ABED_2115 9411be4f68fe95ab6c4450dde2f8a480 405 SUPERFAMILY SSF53686 3 387 5.5E-90 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABED_2115 9411be4f68fe95ab6c4450dde2f8a480 405 Gene3D G3DSA:3.40.50.1100 58 383 8.1E-108 T 14-10-2018 ABED_2115 9411be4f68fe95ab6c4450dde2f8a480 405 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 100 114 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABED_2115 9411be4f68fe95ab6c4450dde2f8a480 405 TIGRFAM TIGR00260 thrC: threonine synthase 57 384 6.2E-54 T 14-10-2018 IPR004450 Threonine synthase-like ABED_2115 9411be4f68fe95ab6c4450dde2f8a480 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 73 377 8.3E-61 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 174 1.4E-53 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 SMART SM00738 2 109 2.5E-32 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 174 18.26 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 PRINTS PR00338 Transcription termination factor NUSG signature 150 166 1.0E-10 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 PRINTS PR00338 Transcription termination factor NUSG signature 132 147 1.0E-10 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 1.0E-10 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 Gene3D G3DSA:2.30.30.30 116 174 3.3E-20 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 ProSitePatterns PS01014 Transcription termination factor nusG signature. 157 166 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 SUPERFAMILY SSF50104 118 174 3.51E-14 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 SUPERFAMILY SSF82679 3 111 6.41E-29 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 Pfam PF02357 Transcription termination factor nusG 4 105 2.8E-20 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABED_1710 685df72110d8c30f22de9cd79f7d393b 175 Gene3D G3DSA:3.30.70.940 1 115 5.7E-31 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABED_1068 2a8314545d65793a608b7d46ec80a32a 199 SUPERFAMILY SSF54001 53 116 8.83E-5 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_1068 2a8314545d65793a608b7d46ec80a32a 199 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 52 159 4.1E-15 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted ABED_1068 2a8314545d65793a608b7d46ec80a32a 199 Gene3D G3DSA:3.10.620.30 14 195 2.6E-63 T 14-10-2018 ABED_1494 50d84e7ed144b6ca70d77ac04b7b6905 105 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 103 3.5E-29 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1494 50d84e7ed144b6ca70d77ac04b7b6905 105 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 103 8.5E-29 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1494 50d84e7ed144b6ca70d77ac04b7b6905 105 SUPERFAMILY SSF141091 1 103 2.35E-25 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1494 50d84e7ed144b6ca70d77ac04b7b6905 105 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 105 20.33 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1494 50d84e7ed144b6ca70d77ac04b7b6905 105 ProSitePatterns PS01169 Ribosomal protein L21 signature. 74 96 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 366 1.1E-15 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 Pfam PF08245 Mur ligase middle domain 106 269 2.2E-8 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 SUPERFAMILY SSF53244 288 432 7.14E-22 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 Gene3D G3DSA:3.40.1190.10 90 285 1.0E-33 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 SUPERFAMILY SSF51984 1 87 5.1E-25 T 14-10-2018 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 2 431 1.4E-110 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 Pfam PF01225 Mur ligase family, catalytic domain 2 98 2.2E-19 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 Gene3D G3DSA:3.40.50.720 2 88 2.7E-29 T 14-10-2018 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 SUPERFAMILY SSF53623 89 287 1.96E-34 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_0216 125a15c5bbfc875b1773dba40d321ad3 435 Gene3D G3DSA:3.90.190.20 286 435 9.2E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_1124 4b99e2c768eb55af6824ad6c8d8972be 656 Pfam PF01432 Peptidase family M3 212 650 3.5E-123 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ABED_1124 4b99e2c768eb55af6824ad6c8d8972be 656 SUPERFAMILY SSF55486 6 651 7.08E-158 T 14-10-2018 ABED_1124 4b99e2c768eb55af6824ad6c8d8972be 656 Gene3D G3DSA:1.10.1370.40 12 650 4.3E-211 T 14-10-2018 ABED_1124 4b99e2c768eb55af6824ad6c8d8972be 656 Gene3D G3DSA:1.10.1370.10 130 585 4.3E-211 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ABED_1356 781eab4658efb194398c459fcf538b3e 157 SUPERFAMILY SSF88946 2 78 1.49E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1356 781eab4658efb194398c459fcf538b3e 157 Gene3D G3DSA:1.10.1740.10 1 68 9.5E-9 T 14-10-2018 ABED_1356 781eab4658efb194398c459fcf538b3e 157 Pfam PF04542 Sigma-70 region 2 4 66 9.5E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1356 781eab4658efb194398c459fcf538b3e 157 Pfam PF08281 Sigma-70, region 4 96 143 1.1E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_1356 781eab4658efb194398c459fcf538b3e 157 Gene3D G3DSA:1.10.10.10 76 157 4.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1356 781eab4658efb194398c459fcf538b3e 157 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 151 1.2E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABED_1356 781eab4658efb194398c459fcf538b3e 157 SUPERFAMILY SSF88659 72 153 1.48E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_0218 df821079e45f777ab266fa39fbacbe29 359 Pfam PF04748 Divergent polysaccharide deacetylase 149 347 2.9E-57 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase ABED_0218 df821079e45f777ab266fa39fbacbe29 359 Gene3D G3DSA:3.20.20.370 142 356 8.7E-61 T 14-10-2018 ABED_0218 df821079e45f777ab266fa39fbacbe29 359 SUPERFAMILY SSF88713 144 353 3.11E-55 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABED_0085 577ab0d5afdb969c4f5ce49480d31238 351 Gene3D G3DSA:3.40.190.10 110 283 5.6E-58 T 14-10-2018 ABED_0085 577ab0d5afdb969c4f5ce49480d31238 351 Gene3D G3DSA:3.40.190.10 25 310 5.6E-58 T 14-10-2018 ABED_0085 577ab0d5afdb969c4f5ce49480d31238 351 SUPERFAMILY SSF53850 24 339 1.52E-67 T 14-10-2018 ABED_0085 577ab0d5afdb969c4f5ce49480d31238 351 Pfam PF12849 PBP superfamily domain 22 309 2.4E-41 T 14-10-2018 IPR024370 PBP domain ABED_0005 894e2a9f3c930c36dd33cfd5d7da033e 127 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 127 41.599 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABED_0005 894e2a9f3c930c36dd33cfd5d7da033e 127 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 20 124 1.3E-36 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABED_0005 894e2a9f3c930c36dd33cfd5d7da033e 127 Gene3D G3DSA:3.30.1130.10 6 127 2.2E-33 T 14-10-2018 ABED_0005 894e2a9f3c930c36dd33cfd5d7da033e 127 PIRSF PIRSF027377 2 127 4.8E-46 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABED_0005 894e2a9f3c930c36dd33cfd5d7da033e 127 Pfam PF14489 QueF-like protein 49 125 1.3E-31 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABED_0005 894e2a9f3c930c36dd33cfd5d7da033e 127 SUPERFAMILY SSF55620 12 118 4.0E-29 T 14-10-2018 ABED_1374 a1566489a5435401e6e151eddb726c81 550 Gene3D G3DSA:4.10.320.10 253 297 5.4E-19 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABED_1374 a1566489a5435401e6e151eddb726c81 550 Gene3D G3DSA:2.40.50.100 123 199 5.7E-14 T 14-10-2018 ABED_1374 a1566489a5435401e6e151eddb726c81 550 Gene3D G3DSA:2.40.50.100 6 83 3.3E-18 T 14-10-2018 ABED_1374 a1566489a5435401e6e151eddb726c81 550 SUPERFAMILY SSF52777 315 548 5.34E-79 T 14-10-2018 ABED_1374 a1566489a5435401e6e151eddb726c81 550 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 147 176 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABED_1374 a1566489a5435401e6e151eddb726c81 550 Gene3D G3DSA:3.30.559.10 309 549 5.4E-91 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABED_1374 a1566489a5435401e6e151eddb726c81 550 SUPERFAMILY SSF47005 248 292 1.44E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABED_1374 a1566489a5435401e6e151eddb726c81 550 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABED_1374 a1566489a5435401e6e151eddb726c81 550 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 323 548 1.5E-76 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ABED_1374 a1566489a5435401e6e151eddb726c81 550 SUPERFAMILY SSF51230 124 196 9.55E-15 T 14-10-2018 IPR011053 Single hybrid motif ABED_1374 a1566489a5435401e6e151eddb726c81 550 Pfam PF00364 Biotin-requiring enzyme 125 195 1.7E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment ABED_1374 a1566489a5435401e6e151eddb726c81 550 Pfam PF00364 Biotin-requiring enzyme 8 76 7.4E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment ABED_1374 a1566489a5435401e6e151eddb726c81 550 SUPERFAMILY SSF51230 3 94 3.01E-20 T 14-10-2018 IPR011053 Single hybrid motif ABED_1374 a1566489a5435401e6e151eddb726c81 550 Pfam PF02817 e3 binding domain 253 288 3.5E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABED_1400 46fc2fe72634f4eb48f0585294d8420e 384 SUPERFAMILY SSF53822 30 379 2.89E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I ABED_1400 46fc2fe72634f4eb48f0585294d8420e 384 Pfam PF13458 Periplasmic binding protein 32 356 2.0E-42 T 14-10-2018 IPR028081 Leucine-binding protein domain ABED_1400 46fc2fe72634f4eb48f0585294d8420e 384 Gene3D G3DSA:3.40.50.2300 150 284 2.1E-81 T 14-10-2018 ABED_1400 46fc2fe72634f4eb48f0585294d8420e 384 Gene3D G3DSA:3.40.50.2300 39 348 2.1E-81 T 14-10-2018 ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 Gene3D G3DSA:3.90.650.10 161 345 1.6E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 153 9.2E-13 T 14-10-2018 IPR016188 PurM-like, N-terminal domain ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 SUPERFAMILY SSF56042 160 341 2.24E-42 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 Hamap MF_00625 Selenide, water dikinase [selD]. 4 345 38.401 T 14-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 344 1.3E-23 T 14-10-2018 IPR010918 PurM-like, C-terminal domain ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 Gene3D G3DSA:3.30.1330.10 1 160 2.4E-40 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 312 5.2E-107 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 SUPERFAMILY SSF55326 7 158 1.64E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_1411 f2a4683bbf80484a562fc30aecc2039d 345 PIRSF PIRSF036407 1 345 1.5E-115 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 ABED_0360 7745929c6b312191e377ead98cd894d8 100 SUPERFAMILY SSF158752 7 96 2.62E-27 T 14-10-2018 IPR023126 HP0242-like superfamily ABED_0360 7745929c6b312191e377ead98cd894d8 100 Pfam PF09442 Domain of unknown function (DUF2018) 16 97 5.9E-30 T 14-10-2018 IPR018563 Protein of unknown function DUF2018 ABED_0360 7745929c6b312191e377ead98cd894d8 100 Gene3D G3DSA:1.10.3350.10 18 99 2.7E-20 T 14-10-2018 IPR023126 HP0242-like superfamily ABED_0290 f1004849471f29e66d32108666cfd8d2 166 Pfam PF13187 4Fe-4S dicluster domain 75 132 6.7E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0290 f1004849471f29e66d32108666cfd8d2 166 Gene3D G3DSA:3.30.70.3270 48 166 9.4E-33 T 14-10-2018 ABED_0290 f1004849471f29e66d32108666cfd8d2 166 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0290 f1004849471f29e66d32108666cfd8d2 166 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 16 164 27.317 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0290 f1004849471f29e66d32108666cfd8d2 166 SUPERFAMILY SSF54862 53 157 4.14E-20 T 14-10-2018 ABED_0290 f1004849471f29e66d32108666cfd8d2 166 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 25 156 4.5E-34 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 Pfam PF03129 Anticodon binding domain 475 565 3.6E-16 T 14-10-2018 IPR004154 Anticodon-binding ABED_0363 5024e4f216d2cc22045e174e7932615c 568 SUPERFAMILY SSF55826 218 374 4.19E-19 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 Gene3D G3DSA:3.90.960.10 240 387 2.3E-216 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 Pfam PF04073 Aminoacyl-tRNA editing domain 256 372 6.6E-21 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.1E-13 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.1E-13 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.1E-13 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.1E-13 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 1.7E-49 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 SUPERFAMILY SSF52954 461 567 1.19E-23 T 14-10-2018 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 SUPERFAMILY SSF55681 10 475 4.56E-89 T 14-10-2018 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 568 36.435 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 Gene3D G3DSA:3.30.930.10 11 463 2.3E-216 T 14-10-2018 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 1.8E-210 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ABED_0363 5024e4f216d2cc22045e174e7932615c 568 Gene3D G3DSA:3.40.50.800 4 551 2.3E-216 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily ABED_1892 96121f5d68747dc4b16565c391383a3e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_1892 96121f5d68747dc4b16565c391383a3e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_1892 96121f5d68747dc4b16565c391383a3e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_1892 96121f5d68747dc4b16565c391383a3e 298 SUPERFAMILY SSF53850 91 296 3.37E-24 T 14-10-2018 ABED_1892 96121f5d68747dc4b16565c391383a3e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_1892 96121f5d68747dc4b16565c391383a3e 298 SUPERFAMILY SSF46785 2 112 6.92E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1892 96121f5d68747dc4b16565c391383a3e 298 Gene3D G3DSA:1.10.10.10 4 93 3.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1892 96121f5d68747dc4b16565c391383a3e 298 Pfam PF03466 LysR substrate binding domain 94 295 5.2E-19 T 14-10-2018 IPR005119 LysR, substrate-binding ABED_1892 96121f5d68747dc4b16565c391383a3e 298 Gene3D G3DSA:3.40.190.290 94 297 1.6E-16 T 14-10-2018 ABED_2121 9793e94d4eaebd19120b55d89a981196 284 Pfam PF04909 Amidohydrolase 82 284 7.6E-30 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABED_2121 9793e94d4eaebd19120b55d89a981196 284 SUPERFAMILY SSF51556 7 284 3.18E-44 T 14-10-2018 IPR032466 Metal-dependent hydrolase ABED_2121 9793e94d4eaebd19120b55d89a981196 284 Gene3D G3DSA:3.20.20.140 4 283 1.5E-57 T 14-10-2018 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 Pfam PF02938 GAD domain 316 405 2.6E-21 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 Gene3D G3DSA:2.40.50.140 1 106 8.5E-31 T 14-10-2018 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 584 2.4E-241 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 SUPERFAMILY SSF55261 290 419 2.62E-35 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 SUPERFAMILY SSF50249 1 106 1.28E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 557 1.9E-107 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 Gene3D G3DSA:3.30.930.10 118 581 2.6E-187 T 14-10-2018 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 Gene3D G3DSA:3.30.1360.30 273 419 2.6E-187 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 2.5E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 517 531 2.5E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 473 489 2.5E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 2.5E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 SUPERFAMILY SSF55681 113 584 5.97E-103 T 14-10-2018 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 Pfam PF01336 OB-fold nucleic acid binding domain 18 98 1.2E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ABED_0723 2a1c78449937f52047b8dfb01663b7e4 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 583 32.57 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ABED_1611 595e699aef7e30e09e11c12f1a826fe6 269 SUPERFAMILY SSF51621 11 269 1.14E-95 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABED_1611 595e699aef7e30e09e11c12f1a826fe6 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 10 269 2.4E-107 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABED_1611 595e699aef7e30e09e11c12f1a826fe6 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 264 7.4E-103 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABED_1611 595e699aef7e30e09e11c12f1a826fe6 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 11 269 38.048 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABED_1611 595e699aef7e30e09e11c12f1a826fe6 269 Gene3D G3DSA:3.20.20.60 1 269 4.9E-101 T 14-10-2018 ABED_1611 595e699aef7e30e09e11c12f1a826fe6 269 PIRSF PIRSF000388 2 269 4.5E-107 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 Gene3D G3DSA:3.40.50.300 1 230 3.7E-51 T 14-10-2018 ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 Gene3D G3DSA:3.40.50.300 246 515 6.5E-54 T 14-10-2018 ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 Pfam PF12848 ABC transporter 198 270 2.4E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 Pfam PF00005 ABC transporter 300 430 6.7E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 SUPERFAMILY SSF52540 270 491 5.66E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 Pfam PF00005 ABC transporter 18 148 2.9E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 SMART SM00382 26 200 7.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 SMART SM00382 308 475 4.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1296 56fb7cc1dee0b4457c747f90386f21b3 578 SUPERFAMILY SSF52540 2 205 3.88E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_2077 b27a061a42d5b19d6c1eb181b7d791bf 156 SUPERFAMILY SSF55040 11 154 1.96E-56 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_2077 b27a061a42d5b19d6c1eb181b7d791bf 156 Gene3D G3DSA:3.30.70.640 1 156 8.9E-63 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_2077 b27a061a42d5b19d6c1eb181b7d791bf 156 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 7.7E-55 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_2077 b27a061a42d5b19d6c1eb181b7d791bf 156 Pfam PF01967 MoaC family 14 149 7.0E-51 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_2077 b27a061a42d5b19d6c1eb181b7d791bf 156 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 1 156 32.758 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0843 2b685785a0e0a405892e954d504f428b 178 Gene3D G3DSA:3.40.50.10420 5 178 7.0E-34 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABED_0843 2b685785a0e0a405892e954d504f428b 178 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 177 1.5E-39 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABED_0843 2b685785a0e0a405892e954d504f428b 178 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 177 7.5E-25 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABED_0843 2b685785a0e0a405892e954d504f428b 178 SUPERFAMILY SSF100950 5 177 1.95E-36 T 14-10-2018 IPR037171 NagB/RpiA transferase-like ABED_0843 2b685785a0e0a405892e954d504f428b 178 PIRSF PIRSF006806 1 178 7.0E-29 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABED_0193 a22f5203cbee2316fc13a9f87c5e09c8 234 Pfam PF02107 Flagellar L-ring protein 42 233 2.3E-42 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ABED_0193 a22f5203cbee2316fc13a9f87c5e09c8 234 PRINTS PR01008 Flagellar L-ring protein signature 63 75 2.5E-6 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ABED_0193 a22f5203cbee2316fc13a9f87c5e09c8 234 PRINTS PR01008 Flagellar L-ring protein signature 195 209 2.5E-6 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ABED_0193 a22f5203cbee2316fc13a9f87c5e09c8 234 PRINTS PR01008 Flagellar L-ring protein signature 174 190 2.5E-6 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 Pfam PF03129 Anticodon binding domain 506 595 1.6E-23 T 14-10-2018 IPR004154 Anticodon-binding ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 SUPERFAMILY SSF52954 492 598 7.7E-28 T 14-10-2018 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 SUPERFAMILY SSF55186 32 206 1.96E-58 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 Gene3D G3DSA:3.30.930.10 189 496 2.7E-120 T 14-10-2018 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 35 599 32.295 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 SMART SM00863 135 184 3.3E-23 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 Gene3D G3DSA:3.40.50.800 497 601 1.2E-29 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 289 493 1.3E-39 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 SUPERFAMILY SSF55681 208 490 3.03E-88 T 14-10-2018 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 41 594 1.0E-213 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 Gene3D G3DSA:3.30.980.10 33 188 3.2E-56 T 14-10-2018 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 135 184 1.6E-15 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 485 1.1E-48 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 429 457 1.1E-48 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 351 1.1E-48 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 295 323 1.1E-48 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABED_0071 0553de4622e6ca3e413a1ccf6cd3f173 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 499 511 1.1E-48 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 15 858 1.5E-287 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 Gene3D G3DSA:3.20.19.10 621 860 4.8E-78 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 Pfam PF00694 Aconitase C-terminal domain 660 790 4.1E-30 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 Gene3D G3DSA:3.30.499.20 3 357 7.4E-127 T 14-10-2018 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 Pfam PF00330 Aconitase family (aconitate hydratase) 70 534 4.4E-142 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 3 860 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 465 478 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 163 171 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 139 152 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 268 281 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 361 375 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 282 295 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 403 414 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 206 221 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 PRINTS PR00415 Aconitase family signature 192 205 6.6E-28 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 Gene3D G3DSA:1.10.1440.20 563 620 8.6E-10 T 14-10-2018 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 SUPERFAMILY SSF52016 600 858 3.53E-67 T 14-10-2018 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 SUPERFAMILY SSF53732 15 590 7.72E-181 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABED_0261 7cba70d8478524ffe4ee9cfd7be6dd39 863 Gene3D G3DSA:3.30.499.10 358 562 4.6E-74 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 Gene3D G3DSA:3.40.50.720 3 263 9.8E-48 T 14-10-2018 ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 SUPERFAMILY SSF51735 2 254 1.01E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 Pfam PF00106 short chain dehydrogenase 3 185 3.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0847 4f346734e079b5e7eaa2dcef443a4bdf 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1653 668a114f51f5a258ab965ba4cbe55424 257 SUPERFAMILY SSF56112 44 170 1.45E-9 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily ABED_1653 668a114f51f5a258ab965ba4cbe55424 257 Pfam PF01163 RIO1 family 69 163 2.8E-5 T 14-10-2018 ABED_1753 cc871a2f53001b34c2f1bc13ddbbc41b 651 Gene3D G3DSA:3.30.750.140 506 624 2.7E-6 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily ABED_1753 cc871a2f53001b34c2f1bc13ddbbc41b 651 Pfam PF02120 Flagellar hook-length control protein FliK 526 609 6.0E-11 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal ABED_1058 c54a548a06fcf9dcb73f5b6a4ddbe468 171 SUPERFAMILY SSF53098 2 167 4.61E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_1058 c54a548a06fcf9dcb73f5b6a4ddbe468 171 Pfam PF00929 Exonuclease 2 164 2.4E-12 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_1058 c54a548a06fcf9dcb73f5b6a4ddbe468 171 SMART SM00479 1 171 0.0011 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_1058 c54a548a06fcf9dcb73f5b6a4ddbe468 171 Gene3D G3DSA:3.30.420.10 1 170 1.6E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_0615 e264585cb8b9451679593b4ae98b2b88 480 SMART SM00382 190 387 0.0039 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0615 e264585cb8b9451679593b4ae98b2b88 480 Pfam PF00772 DnaB-like helicase N terminal domain 5 98 3.7E-23 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ABED_0615 e264585cb8b9451679593b4ae98b2b88 480 Gene3D G3DSA:1.10.860.10 2 117 1.3E-27 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABED_0615 e264585cb8b9451679593b4ae98b2b88 480 SUPERFAMILY SSF48024 5 105 1.2E-22 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 ABED_0615 e264585cb8b9451679593b4ae98b2b88 480 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 5 450 4.6E-142 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 ABED_0615 e264585cb8b9451679593b4ae98b2b88 480 Pfam PF03796 DnaB-like helicase C terminal domain 175 447 3.1E-101 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ABED_0615 e264585cb8b9451679593b4ae98b2b88 480 Gene3D G3DSA:3.40.50.300 146 449 7.7E-100 T 14-10-2018 ABED_0615 e264585cb8b9451679593b4ae98b2b88 480 SUPERFAMILY SSF52540 175 441 4.41E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1364 4dc965ac027b0a7a7bd9595f165f2e76 420 PIRSF PIRSF000412 1 416 9.5E-167 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABED_1364 4dc965ac027b0a7a7bd9595f165f2e76 420 Gene3D G3DSA:3.40.640.10 38 288 1.8E-183 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1364 4dc965ac027b0a7a7bd9595f165f2e76 420 SUPERFAMILY SSF53383 8 416 3.34E-178 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1364 4dc965ac027b0a7a7bd9595f165f2e76 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABED_1364 4dc965ac027b0a7a7bd9595f165f2e76 420 Gene3D G3DSA:3.90.1150.10 11 395 1.8E-183 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1364 4dc965ac027b0a7a7bd9595f165f2e76 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 416 51.236 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABED_1364 4dc965ac027b0a7a7bd9595f165f2e76 420 Pfam PF00464 Serine hydroxymethyltransferase 9 384 1.7E-175 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABED_1573 28a55c02049717ba248ae1b2216fb8c2 289 Gene3D G3DSA:3.30.70.20 158 208 9.2E-7 T 14-10-2018 ABED_1573 28a55c02049717ba248ae1b2216fb8c2 289 Pfam PF13746 4Fe-4S dicluster domain 184 237 6.4E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1573 28a55c02049717ba248ae1b2216fb8c2 289 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 213 224 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1573 28a55c02049717ba248ae1b2216fb8c2 289 SUPERFAMILY SSF54862 74 270 1.05E-15 T 14-10-2018 ABED_1573 28a55c02049717ba248ae1b2216fb8c2 289 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 314 28.354 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 308 3.0E-18 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 Gene3D G3DSA:1.10.150.20 216 332 2.0E-27 T 14-10-2018 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 Gene3D G3DSA:2.170.120.12 53 172 2.3E-66 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 305 1.0E-23 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 SUPERFAMILY SSF47789 249 316 7.06E-19 T 14-10-2018 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 SMART SM00662 23 229 4.2E-47 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 Gene3D G3DSA:3.30.1360.10 16 215 2.3E-66 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 63 155 1.2E-13 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 SUPERFAMILY SSF55257 9 228 2.69E-22 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 SUPERFAMILY SSF56553 53 173 1.7E-27 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 221 8.9E-13 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0966 8ed69d249d4a5f4d852d3604b80e0780 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 312 1.5E-87 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0701 7f3675bfdad17d44c1d444b40234f2cb 93 SUPERFAMILY SSF54189 7 89 7.19E-22 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0701 7f3675bfdad17d44c1d444b40234f2cb 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 14.424 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ABED_0701 7f3675bfdad17d44c1d444b40234f2cb 93 Pfam PF00276 Ribosomal protein L23 9 88 3.4E-19 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ABED_0701 7f3675bfdad17d44c1d444b40234f2cb 93 Gene3D G3DSA:3.30.70.330 3 90 1.9E-19 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 SUPERFAMILY SSF46626 115 191 8.95E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 Gene3D G3DSA:2.60.40.10 314 393 3.5E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 Pfam PF09100 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV 399 534 1.8E-55 T 14-10-2018 IPR015184 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 SUPERFAMILY SSF81296 313 394 1.19E-15 T 14-10-2018 IPR014756 Immunoglobulin E-set ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 Pfam PF14930 Quinohemoprotein amine dehydrogenase, alpha subunit domain II 204 307 3.0E-34 T 14-10-2018 IPR009111 Quinohemoprotein amine dehydrogenase, alpha subunit, domain 2 ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 SUPERFAMILY SSF69298 196 307 4.97E-34 T 14-10-2018 IPR036718 Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 superfamily ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 SUPERFAMILY SSF46626 29 108 1.7E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 Pfam PF09098 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding 28 194 5.6E-90 T 14-10-2018 IPR015182 Quinohemoprotein amine dehydrogenase, alpha subunit, haem binding domain ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 Gene3D G3DSA:1.10.760.10 25 93 3.6E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 Gene3D G3DSA:2.40.128.120 202 310 3.4E-28 T 14-10-2018 IPR036718 Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 superfamily ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 Gene3D G3DSA:2.60.40.10 394 527 1.5E-52 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 Pfam PF09099 Quinohemoprotein amine dehydrogenase, alpha subunit domain III 313 394 4.0E-31 T 14-10-2018 IPR015183 Quinohemoprotein amine dehydrogenase, alpha subunit domain III ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 SUPERFAMILY SSF81296 395 535 1.75E-52 T 14-10-2018 IPR014756 Immunoglobulin E-set ABED_0440 6c5fcae158daa0417604ab298d58b9e4 535 TIGRFAM TIGR03908 QH_alpha: quinohemoprotein amine dehydrogenase, alpha subunit 25 534 3.4E-171 T 14-10-2018 IPR023887 Quinohemoprotein amine dehydrogenase, alpha subunit ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 SUPERFAMILY SSF50249 145 213 8.58E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 SUPERFAMILY SSF54814 215 293 5.56E-24 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 Pfam PF13184 NusA-like KH domain 245 313 1.1E-20 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 Gene3D G3DSA:3.30.300.20 214 292 7.0E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 390 22.582 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 SUPERFAMILY SSF69705 4 138 1.44E-23 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 Gene3D G3DSA:3.30.1480.10 2 135 2.0E-17 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 SMART SM00316 147 213 3.6E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 Pfam PF08529 NusA N-terminal domain 4 124 3.6E-17 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 359 2.1E-94 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 SUPERFAMILY SSF54814 296 361 1.05E-9 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 Gene3D G3DSA:2.40.50.140 149 213 5.9E-12 T 14-10-2018 ABED_0228 ed4e105ae16ccb5cab60adc9aba9e62f 391 Gene3D G3DSA:3.30.300.20 293 362 4.5E-19 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta ABED_1691 125038b2ff897b56655b996314741277 113 Pfam PF01022 Bacterial regulatory protein, arsR family 37 83 3.8E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1691 125038b2ff897b56655b996314741277 113 Gene3D G3DSA:1.10.10.10 2 112 1.5E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1691 125038b2ff897b56655b996314741277 113 SUPERFAMILY SSF46785 22 109 5.11E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1691 125038b2ff897b56655b996314741277 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 79 94 1.6E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1691 125038b2ff897b56655b996314741277 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.6E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1691 125038b2ff897b56655b996314741277 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 62 1.6E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1691 125038b2ff897b56655b996314741277 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 32 47 1.6E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1691 125038b2ff897b56655b996314741277 113 SMART SM00418 30 108 8.5E-29 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_0729 34c0e382b3549b52411abb7f428d0451 214 Gene3D G3DSA:3.30.559.10 1 210 1.2E-65 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABED_0729 34c0e382b3549b52411abb7f428d0451 214 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 8 203 3.0E-57 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 ABED_0729 34c0e382b3549b52411abb7f428d0451 214 SMART SM01059 1 204 7.1E-117 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 ABED_0729 34c0e382b3549b52411abb7f428d0451 214 Pfam PF00302 Chloramphenicol acetyltransferase 3 204 2.0E-81 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 ABED_0729 34c0e382b3549b52411abb7f428d0451 214 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 185 195 - T 14-10-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 ABED_0729 34c0e382b3549b52411abb7f428d0451 214 PIRSF PIRSF000440 1 213 2.4E-78 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 ABED_0729 34c0e382b3549b52411abb7f428d0451 214 SUPERFAMILY SSF52777 2 210 2.04E-70 T 14-10-2018 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 1 509 19.681 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 Pfam PF02096 60Kd inner membrane protein 328 507 1.5E-61 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 PRINTS PR01900 YidC translocation/secretion protein signature 313 329 1.2E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 PRINTS PR01900 YidC translocation/secretion protein signature 462 486 1.2E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 PRINTS PR01900 YidC translocation/secretion protein signature 442 457 1.2E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 2 326 2.9E-33 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 327 507 1.6E-68 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 PRINTS PR00701 60kDa inner membrane protein signature 473 496 1.5E-41 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 PRINTS PR00701 60kDa inner membrane protein signature 436 458 1.5E-41 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 PRINTS PR00701 60kDa inner membrane protein signature 389 412 1.5E-41 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 PRINTS PR00701 60kDa inner membrane protein signature 298 318 1.5E-41 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABED_1506 ed7e9676fec930e57d2261a590c53a34 517 Pfam PF14849 YidC periplasmic domain 82 316 4.7E-11 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain ABED_1469 8fdd3a676b38eefe53823441869bc814 468 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 SUPERFAMILY SSF48557 6 467 2.67E-137 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 Pfam PF00206 Lyase 13 344 7.2E-97 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal ABED_1469 8fdd3a676b38eefe53823441869bc814 468 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 464 3.6E-216 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 2.5E-5 T 14-10-2018 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 2.5E-5 T 14-10-2018 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 PRINTS PR00145 Argininosuccinate lyase family signature 136 158 2.5E-5 T 14-10-2018 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 Pfam PF10415 Fumarase C C-terminus 410 462 2.8E-20 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 1.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family ABED_1469 8fdd3a676b38eefe53823441869bc814 468 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 1.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family ABED_1469 8fdd3a676b38eefe53823441869bc814 468 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 1.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family ABED_1469 8fdd3a676b38eefe53823441869bc814 468 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 1.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family ABED_1469 8fdd3a676b38eefe53823441869bc814 468 Gene3D G3DSA:1.20.200.10 142 409 3.5E-109 T 14-10-2018 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 Gene3D G3DSA:1.10.40.30 410 461 1.0E-18 T 14-10-2018 ABED_1469 8fdd3a676b38eefe53823441869bc814 468 Gene3D G3DSA:1.10.275.10 3 141 3.9E-56 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal ABED_1157 645661a1786618b6fa67e50db8510619 359 Gene3D G3DSA:3.30.565.10 205 356 3.0E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1157 645661a1786618b6fa67e50db8510619 359 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 355 1.3E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1157 645661a1786618b6fa67e50db8510619 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 6.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1157 645661a1786618b6fa67e50db8510619 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 6.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1157 645661a1786618b6fa67e50db8510619 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 6.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1157 645661a1786618b6fa67e50db8510619 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 314 6.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1157 645661a1786618b6fa67e50db8510619 359 SMART SM00387 245 357 5.6E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1157 645661a1786618b6fa67e50db8510619 359 SMART SM00091 2 68 6.1E-4 T 14-10-2018 IPR000014 PAS domain ABED_1157 645661a1786618b6fa67e50db8510619 359 SUPERFAMILY SSF47384 131 205 1.02E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1157 645661a1786618b6fa67e50db8510619 359 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 122 6.3E-16 T 14-10-2018 IPR000014 PAS domain ABED_1157 645661a1786618b6fa67e50db8510619 359 Pfam PF00989 PAS fold 14 108 1.5E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 ABED_1157 645661a1786618b6fa67e50db8510619 359 SUPERFAMILY SSF55874 202 355 3.27E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1157 645661a1786618b6fa67e50db8510619 359 Gene3D G3DSA:1.10.287.130 118 204 6.3E-12 T 14-10-2018 ABED_1157 645661a1786618b6fa67e50db8510619 359 Gene3D G3DSA:3.30.450.20 1 117 1.4E-25 T 14-10-2018 ABED_1157 645661a1786618b6fa67e50db8510619 359 SUPERFAMILY SSF55785 10 112 5.93E-25 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0905 8291ed7c10365893911fd869c953f24e 937 SUPERFAMILY SSF52540 609 905 5.42E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0905 8291ed7c10365893911fd869c953f24e 937 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 916 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ABED_0905 8291ed7c10365893911fd869c953f24e 937 Gene3D G3DSA:3.30.190.20 131 246 6.2E-221 T 14-10-2018 ABED_0905 8291ed7c10365893911fd869c953f24e 937 Gene3D G3DSA:3.40.50.300 8 589 6.2E-221 T 14-10-2018 ABED_0905 8291ed7c10365893911fd869c953f24e 937 ProSitePatterns PS00211 ABC transporters family signature. 822 836 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0905 8291ed7c10365893911fd869c953f24e 937 SUPERFAMILY SSF52540 12 565 1.65E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0905 8291ed7c10365893911fd869c953f24e 937 Gene3D G3DSA:1.10.8.280 291 395 6.2E-221 T 14-10-2018 ABED_0905 8291ed7c10365893911fd869c953f24e 937 Gene3D G3DSA:3.40.50.300 608 931 7.0E-133 T 14-10-2018 ABED_0905 8291ed7c10365893911fd869c953f24e 937 Gene3D G3DSA:1.20.1580.10 91 488 6.2E-221 T 14-10-2018 ABED_0905 8291ed7c10365893911fd869c953f24e 937 Gene3D G3DSA:1.20.1580.10 684 822 7.0E-133 T 14-10-2018 ABED_0905 8291ed7c10365893911fd869c953f24e 937 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 251 6.5E-90 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 6.3E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 6.3E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 6.3E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 6.3E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 Pfam PF00557 Metallopeptidase family M24 12 241 5.9E-46 T 14-10-2018 IPR000994 Peptidase M24 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 35.122 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 Gene3D G3DSA:3.90.230.10 1 254 2.4E-82 T 14-10-2018 ABED_0719 3fedf2eba02aee4473fa4d88369f17fb 254 SUPERFAMILY SSF55920 6 251 6.15E-73 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like ABED_1906 7d404c9922d0a38cd10871e8e063f889 562 SUPERFAMILY SSF143975 2 379 1.83E-126 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABED_1906 7d404c9922d0a38cd10871e8e063f889 562 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABED_1906 7d404c9922d0a38cd10871e8e063f889 562 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 467 478 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABED_1906 7d404c9922d0a38cd10871e8e063f889 562 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 559 3.9E-226 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABED_1906 7d404c9922d0a38cd10871e8e063f889 562 Pfam PF00920 Dehydratase family 31 556 4.4E-210 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABED_1906 7d404c9922d0a38cd10871e8e063f889 562 SUPERFAMILY SSF52016 380 559 7.22E-58 T 14-10-2018 ABED_1906 7d404c9922d0a38cd10871e8e063f889 562 Gene3D G3DSA:3.50.30.80 380 530 6.3E-53 T 14-10-2018 ABED_1906 7d404c9922d0a38cd10871e8e063f889 562 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 559 44.371 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 144 1.4E-35 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 307 2.0E-30 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 Gene3D G3DSA:3.40.50.720 1 146 1.7E-47 T 14-10-2018 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 SUPERFAMILY SSF56327 145 308 3.31E-50 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 Gene3D G3DSA:3.90.110.10 147 314 8.3E-55 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 PIRSF PIRSF000102 1 313 2.9E-98 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 3.5E-23 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 3.5E-23 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 3.5E-23 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 3.5E-23 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 PRINTS PR00086 L-lactate dehydrogenase signature 30 54 3.5E-23 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABED_1228 3857bd5d1db387773b46f843ac4ce5a1 314 SUPERFAMILY SSF51735 6 145 1.3E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0767 e97dcd1e1bf8d2472c0522fc786b53d0 285 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 266 5.7E-123 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 ABED_0767 e97dcd1e1bf8d2472c0522fc786b53d0 285 Pfam PF00483 Nucleotidyl transferase 12 268 5.1E-29 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABED_0767 e97dcd1e1bf8d2472c0522fc786b53d0 285 Gene3D G3DSA:3.90.550.10 5 282 5.5E-80 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0767 e97dcd1e1bf8d2472c0522fc786b53d0 285 SUPERFAMILY SSF53448 4 272 5.63E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1671 685f85b17afd0fcb17544ea15252439c 168 PIRSF PIRSF000239 1 146 6.3E-29 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABED_1671 685f85b17afd0fcb17544ea15252439c 168 Pfam PF00578 AhpC/TSA family 4 132 1.1E-37 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABED_1671 685f85b17afd0fcb17544ea15252439c 168 SUPERFAMILY SSF52833 1 164 1.95E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1671 685f85b17afd0fcb17544ea15252439c 168 Gene3D G3DSA:3.40.30.10 2 153 1.3E-44 T 14-10-2018 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Gene3D G3DSA:2.40.160.50 420 758 1.4E-64 T 14-10-2018 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 20 758 1.6E-172 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Gene3D G3DSA:3.10.20.310 171 262 6.8E-12 T 14-10-2018 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Gene3D G3DSA:3.10.20.310 265 340 5.7E-11 T 14-10-2018 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Gene3D G3DSA:3.10.20.310 345 419 4.1E-19 T 14-10-2018 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Pfam PF07244 Surface antigen variable number repeat 275 341 4.2E-8 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Pfam PF07244 Surface antigen variable number repeat 88 166 1.5E-9 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Pfam PF07244 Surface antigen variable number repeat 20 84 3.3E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Pfam PF07244 Surface antigen variable number repeat 171 259 1.9E-4 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Pfam PF07244 Surface antigen variable number repeat 344 415 1.5E-9 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Gene3D G3DSA:3.10.20.310 16 85 7.6E-10 T 14-10-2018 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Gene3D G3DSA:3.10.20.310 87 166 1.0E-11 T 14-10-2018 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 Pfam PF01103 Surface antigen 443 758 9.8E-47 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 ABED_1133 02419d73764d8d843d00c4304e41dee9 758 PIRSF PIRSF006076 2 758 1.1E-185 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ABED_1219 57c214ef0486e4609c412407a8af03a9 428 Gene3D G3DSA:3.40.630.10 1 215 4.2E-36 T 14-10-2018 ABED_1219 57c214ef0486e4609c412407a8af03a9 428 Gene3D G3DSA:3.40.630.10 309 428 7.3E-17 T 14-10-2018 ABED_1219 57c214ef0486e4609c412407a8af03a9 428 SUPERFAMILY SSF53187 6 427 1.5E-36 T 14-10-2018 ABED_1219 57c214ef0486e4609c412407a8af03a9 428 PRINTS PR00934 X-His dipeptidase (M25) signature 80 98 4.1E-9 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABED_1219 57c214ef0486e4609c412407a8af03a9 428 PRINTS PR00934 X-His dipeptidase (M25) signature 396 418 4.1E-9 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABED_1219 57c214ef0486e4609c412407a8af03a9 428 Pfam PF01546 Peptidase family M20/M25/M40 60 425 3.3E-6 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 ABED_1462 751bd92167408ead213598ce00c078ac 261 Gene3D G3DSA:1.10.10.60 147 209 7.0E-9 T 14-10-2018 ABED_1462 751bd92167408ead213598ce00c078ac 261 Pfam PF02311 AraC-like ligand binding domain 27 132 4.6E-5 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ABED_1462 751bd92167408ead213598ce00c078ac 261 Gene3D G3DSA:2.60.120.10 4 79 7.8E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_1462 751bd92167408ead213598ce00c078ac 261 SMART SM00342 172 254 3.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1462 751bd92167408ead213598ce00c078ac 261 Pfam PF12833 Helix-turn-helix domain 178 255 3.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1462 751bd92167408ead213598ce00c078ac 261 SUPERFAMILY SSF46689 210 257 3.05E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_1462 751bd92167408ead213598ce00c078ac 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 250 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABED_1462 751bd92167408ead213598ce00c078ac 261 SUPERFAMILY SSF46689 161 206 1.52E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_1462 751bd92167408ead213598ce00c078ac 261 SUPERFAMILY SSF51182 26 88 9.84E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_1462 751bd92167408ead213598ce00c078ac 261 Gene3D G3DSA:1.10.10.60 210 260 8.9E-15 T 14-10-2018 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 Gene3D G3DSA:1.10.287.130 250 334 1.4E-12 T 14-10-2018 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 Gene3D G3DSA:3.30.450.20 2 130 4.8E-18 T 14-10-2018 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 Pfam PF13426 PAS domain 161 249 9.1E-5 T 14-10-2018 IPR000014 PAS domain ABED_1269 b57b791c32637bbcbe679f41080defc3 497 Pfam PF00989 PAS fold 8 74 4.8E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 Gene3D G3DSA:3.30.565.10 335 496 7.4E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1269 b57b791c32637bbcbe679f41080defc3 497 SMART SM00387 375 497 1.7E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1269 b57b791c32637bbcbe679f41080defc3 497 Gene3D G3DSA:3.30.450.20 143 249 4.7E-8 T 14-10-2018 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 SUPERFAMILY SSF47384 258 334 5.49E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 494 8.1E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1269 b57b791c32637bbcbe679f41080defc3 497 SUPERFAMILY SSF55785 135 248 7.96E-7 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1269 b57b791c32637bbcbe679f41080defc3 497 SUPERFAMILY SSF55874 335 494 4.58E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1269 b57b791c32637bbcbe679f41080defc3 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 2.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 446 2.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 2.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1269 b57b791c32637bbcbe679f41080defc3 497 SMART SM00091 6 72 0.039 T 14-10-2018 IPR000014 PAS domain ABED_1269 b57b791c32637bbcbe679f41080defc3 497 SMART SM00091 148 215 2.6 T 14-10-2018 IPR000014 PAS domain ABED_1269 b57b791c32637bbcbe679f41080defc3 497 SUPERFAMILY SSF55785 7 75 1.92E-6 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1508 77b002666af2a30f854c6a02ab1199be 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 1.0E-15 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1508 77b002666af2a30f854c6a02ab1199be 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.9E-26 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1508 77b002666af2a30f854c6a02ab1199be 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1508 77b002666af2a30f854c6a02ab1199be 44 Pfam PF00468 Ribosomal protein L34 1 44 7.1E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1508 77b002666af2a30f854c6a02ab1199be 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.811 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2054 1aba0ecaf425a2823ce2723ea4ee8ffb 376 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 4 374 7.1E-138 T 14-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase ABED_2054 1aba0ecaf425a2823ce2723ea4ee8ffb 376 Gene3D G3DSA:3.40.640.10 1 250 4.0E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_2054 1aba0ecaf425a2823ce2723ea4ee8ffb 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 370 4.0E-100 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABED_2054 1aba0ecaf425a2823ce2723ea4ee8ffb 376 PIRSF PIRSF000390 1 376 2.5E-99 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABED_2054 1aba0ecaf425a2823ce2723ea4ee8ffb 376 Gene3D G3DSA:3.90.1150.10 251 375 7.9E-30 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_2054 1aba0ecaf425a2823ce2723ea4ee8ffb 376 SUPERFAMILY SSF53383 4 375 7.38E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1903 d070bf593e3d1fb86b427602007bd322 407 Gene3D G3DSA:3.30.565.10 261 406 1.2E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1903 d070bf593e3d1fb86b427602007bd322 407 Gene3D G3DSA:1.10.287.130 156 260 7.0E-17 T 14-10-2018 ABED_1903 d070bf593e3d1fb86b427602007bd322 407 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 265 1.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_1903 d070bf593e3d1fb86b427602007bd322 407 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 397 1.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1903 d070bf593e3d1fb86b427602007bd322 407 SUPERFAMILY SSF158472 160 200 6.8E-5 T 14-10-2018 ABED_1903 d070bf593e3d1fb86b427602007bd322 407 SUPERFAMILY SSF47384 194 267 4.12E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1903 d070bf593e3d1fb86b427602007bd322 407 SMART SM00387 308 407 0.0053 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1903 d070bf593e3d1fb86b427602007bd322 407 SUPERFAMILY SSF55874 296 399 1.96E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1903 d070bf593e3d1fb86b427602007bd322 407 SMART SM00388 210 268 1.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_1471 a875311631cd95224ee921ad246a72b5 309 Pfam PF00698 Acyl transferase domain 6 282 2.2E-29 T 14-10-2018 IPR014043 Acyl transferase ABED_1471 a875311631cd95224ee921ad246a72b5 309 Gene3D G3DSA:3.30.70.250 124 197 4.9E-82 T 14-10-2018 ABED_1471 a875311631cd95224ee921ad246a72b5 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 288 7.0E-99 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ABED_1471 a875311631cd95224ee921ad246a72b5 309 PIRSF PIRSF000446 1 308 5.2E-87 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ABED_1471 a875311631cd95224ee921ad246a72b5 309 Gene3D G3DSA:3.40.366.10 5 282 4.9E-82 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 ABED_1471 a875311631cd95224ee921ad246a72b5 309 SUPERFAMILY SSF52151 3 291 1.44E-54 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABED_1471 a875311631cd95224ee921ad246a72b5 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 6.0E-18 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain ABED_1471 a875311631cd95224ee921ad246a72b5 309 SUPERFAMILY SSF55048 129 193 5.62E-14 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ABED_0781 cbb2fa58e292f12bb1d0786cf2deb3b4 272 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 77 253 9.7E-26 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_0781 cbb2fa58e292f12bb1d0786cf2deb3b4 272 SMART SM00479 82 247 1.6E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_0781 cbb2fa58e292f12bb1d0786cf2deb3b4 272 SUPERFAMILY SSF53098 82 269 9.12E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_0781 cbb2fa58e292f12bb1d0786cf2deb3b4 272 Gene3D G3DSA:3.30.420.10 75 251 2.6E-41 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_0781 cbb2fa58e292f12bb1d0786cf2deb3b4 272 Pfam PF00929 Exonuclease 85 237 4.5E-27 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_0556 8f4ff99e1218747529ac289bc8df74a5 422 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 220 373 2.4E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0556 8f4ff99e1218747529ac289bc8df74a5 422 SUPERFAMILY SSF58104 90 405 1.14E-50 T 14-10-2018 ABED_0556 8f4ff99e1218747529ac289bc8df74a5 422 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 336 365 4.6E-36 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0556 8f4ff99e1218747529ac289bc8df74a5 422 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 182 211 4.6E-36 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0556 8f4ff99e1218747529ac289bc8df74a5 422 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 4.6E-36 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0556 8f4ff99e1218747529ac289bc8df74a5 422 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 259 286 4.6E-36 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0556 8f4ff99e1218747529ac289bc8df74a5 422 SMART SM00283 161 411 6.0E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0556 8f4ff99e1218747529ac289bc8df74a5 422 Gene3D G3DSA:1.10.287.950 111 406 5.1E-51 T 14-10-2018 ABED_1184 89e37c982892ee8e0028a1d048402888 230 SMART SM00448 15 121 0.0023 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1184 89e37c982892ee8e0028a1d048402888 230 Pfam PF00072 Response regulator receiver domain 23 121 2.3E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1184 89e37c982892ee8e0028a1d048402888 230 Gene3D G3DSA:3.40.50.2300 13 134 6.9E-12 T 14-10-2018 ABED_1184 89e37c982892ee8e0028a1d048402888 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 223 1.5E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1184 89e37c982892ee8e0028a1d048402888 230 SMART SM00862 154 224 5.9E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1184 89e37c982892ee8e0028a1d048402888 230 Gene3D G3DSA:1.10.10.10 135 227 3.6E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1184 89e37c982892ee8e0028a1d048402888 230 SUPERFAMILY SSF52172 15 183 1.96E-15 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 SUPERFAMILY SSF51246 317 385 5.65E-9 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 SUPERFAMILY SSF56059 112 311 6.01E-56 T 14-10-2018 ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 7 389 47.419 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 383 4.2E-159 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 Gene3D G3DSA:3.40.50.20 1 123 1.5E-45 T 14-10-2018 ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 Gene3D G3DSA:3.30.1490.20 124 194 4.0E-28 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 SUPERFAMILY SSF52440 4 111 4.17E-28 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 Pfam PF02222 ATP-grasp domain 122 292 9.3E-55 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ABED_0137 a5f5be88b5c7c8beb862142011362bed 389 Gene3D G3DSA:3.30.470.20 195 386 1.2E-50 T 14-10-2018 ABED_0135 5973bd5a15c429340923671304eac35f 196 Pfam PF01121 Dephospho-CoA kinase 10 181 8.1E-47 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABED_0135 5973bd5a15c429340923671304eac35f 196 SUPERFAMILY SSF52540 10 194 2.48E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0135 5973bd5a15c429340923671304eac35f 196 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 10 189 3.5E-49 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABED_0135 5973bd5a15c429340923671304eac35f 196 Gene3D G3DSA:3.40.50.300 4 196 1.8E-59 T 14-10-2018 ABED_0135 5973bd5a15c429340923671304eac35f 196 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 7 194 24.048 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABED_0017 20eeb3cf259e42fda840bb8d714409c6 2706 SUPERFAMILY SSF141072 469 587 1.7E-5 T 14-10-2018 IPR038081 CalX-like domain superfamily ABED_0017 20eeb3cf259e42fda840bb8d714409c6 2706 SUPERFAMILY SSF141072 186 302 2.49E-5 T 14-10-2018 IPR038081 CalX-like domain superfamily ABED_0017 20eeb3cf259e42fda840bb8d714409c6 2706 SUPERFAMILY SSF141072 325 443 1.7E-5 T 14-10-2018 IPR038081 CalX-like domain superfamily ABED_0017 20eeb3cf259e42fda840bb8d714409c6 2706 SUPERFAMILY SSF141072 613 731 1.7E-5 T 14-10-2018 IPR038081 CalX-like domain superfamily ABED_1460 faa191ce00aafa9b7cdc93a743e31263 353 SUPERFAMILY SSF52768 30 345 5.4E-59 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily ABED_1460 faa191ce00aafa9b7cdc93a743e31263 353 PIRSF PIRSF036979 23 346 8.5E-41 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 ABED_1460 faa191ce00aafa9b7cdc93a743e31263 353 Pfam PF00491 Arginase family 36 339 1.5E-58 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 ABED_1460 faa191ce00aafa9b7cdc93a743e31263 353 PRINTS PR00116 Arginase signature 268 297 1.0E-13 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 ABED_1460 faa191ce00aafa9b7cdc93a743e31263 353 PRINTS PR00116 Arginase signature 151 166 1.0E-13 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 ABED_0446 7c8efd7d7cca868da4c1332f06991339 441 Gene3D G3DSA:3.30.9.100 39 248 5.1E-35 T 14-10-2018 ABED_0446 7c8efd7d7cca868da4c1332f06991339 441 Pfam PF04820 Tryptophan halogenase 58 367 5.7E-15 T 14-10-2018 IPR006905 Flavin-dependent halogenase ABED_0446 7c8efd7d7cca868da4c1332f06991339 441 Gene3D G3DSA:3.50.50.60 7 343 5.1E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0446 7c8efd7d7cca868da4c1332f06991339 441 SUPERFAMILY SSF51905 4 343 1.77E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 Gene3D G3DSA:2.60.40.10 324 415 1.1E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 Gene3D G3DSA:2.60.40.10 142 233 6.5E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 SUPERFAMILY SSF49265 321 410 7.61E-9 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 SUPERFAMILY SSF49265 142 306 1.44E-18 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 Pfam PF00041 Fibronectin type III domain 139 210 5.6E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 Pfam PF00041 Fibronectin type III domain 232 307 3.3E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 SUPERFAMILY SSF49265 50 179 1.34E-7 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 SMART SM00060 230 311 0.0015 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 SMART SM00060 323 404 0.93 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 SMART SM00060 133 216 0.023 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 SMART SM00060 27 120 4.5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 Gene3D G3DSA:2.60.40.10 234 322 1.6E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_0948 fd229d686f754c76f566c0d7e3dd7708 416 Gene3D G3DSA:2.60.40.10 36 133 9.7E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_1582 5818ae7587c04c6b45311e78d07ca0ac 396 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 8 393 22.332 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ABED_1582 5818ae7587c04c6b45311e78d07ca0ac 396 Gene3D G3DSA:1.20.1530.10 6 395 3.7E-138 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily ABED_1582 5818ae7587c04c6b45311e78d07ca0ac 396 Pfam PF06965 Na+/H+ antiporter 1 10 387 3.3E-140 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ABED_1582 5818ae7587c04c6b45311e78d07ca0ac 396 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 11 387 3.8E-133 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ABED_1649 6a1da89c8f82a5990f9db10421adc1de 292 Gene3D G3DSA:3.90.25.10 165 281 4.0E-100 T 14-10-2018 ABED_1649 6a1da89c8f82a5990f9db10421adc1de 292 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 8 287 4.6E-85 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 ABED_1649 6a1da89c8f82a5990f9db10421adc1de 292 SUPERFAMILY SSF51735 7 288 2.82E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1649 6a1da89c8f82a5990f9db10421adc1de 292 Gene3D G3DSA:3.40.50.720 8 275 4.0E-100 T 14-10-2018 ABED_1649 6a1da89c8f82a5990f9db10421adc1de 292 Pfam PF04321 RmlD substrate binding domain 7 288 6.6E-92 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Pfam PF00873 AcrB/AcrD/AcrF family 18 1020 3.6E-132 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 SUPERFAMILY SSF82714 182 263 6.67E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Gene3D G3DSA:1.20.1640.10 18 493 1.3E-210 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Gene3D G3DSA:3.30.2090.10 177 266 1.3E-210 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Gene3D G3DSA:3.30.70.1440 661 866 1.3E-210 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Gene3D G3DSA:3.30.70.1320 135 322 1.3E-210 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 SUPERFAMILY SSF82866 805 1024 9.02E-39 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 SUPERFAMILY SSF82693 48 132 1.44E-14 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Gene3D G3DSA:3.30.70.1430 41 816 1.3E-210 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 SUPERFAMILY SSF82693 139 319 7.85E-10 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 SUPERFAMILY SSF82866 289 483 1.57E-36 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Gene3D G3DSA:3.30.2090.10 723 808 1.3E-210 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Gene3D G3DSA:3.30.70.1430 544 660 1.3E-210 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 Gene3D G3DSA:1.20.1640.10 494 1018 1.3E-210 T 14-10-2018 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 PRINTS PR00702 Acriflavin resistance protein family signature 433 456 2.2E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 2.2E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 2.2E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1694 cc6d5ba37ae695685b71984a52683a29 1026 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.2E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 SUPERFAMILY SSF53067 9 197 2.75E-30 T 14-10-2018 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 463 22.829 T 14-10-2018 IPR020823 Cell division protein FtsA ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 Gene3D G3DSA:3.30.1490.110 85 169 4.4E-82 T 14-10-2018 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 Gene3D G3DSA:3.30.420.40 197 358 4.4E-82 T 14-10-2018 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 SMART SM00842 8 196 1.1E-50 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 PIRSF PIRSF003101 1 463 1.6E-84 T 14-10-2018 IPR020823 Cell division protein FtsA ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 SUPERFAMILY SSF53067 201 363 1.23E-27 T 14-10-2018 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 Pfam PF14450 Cell division protein FtsA 207 359 1.3E-15 T 14-10-2018 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 385 1.3E-92 T 14-10-2018 IPR020823 Cell division protein FtsA ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 9.8E-19 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 Gene3D G3DSA:3.30.420.40 11 367 4.4E-82 T 14-10-2018 ABED_1288 54dea309d5e1134ece3d1c2999d3e434 463 Gene3D G3DSA:3.90.640.10 235 305 4.4E-82 T 14-10-2018 ABED_2021 52b37b7eeee10aba978aebd87454ac89 203 SUPERFAMILY SSF63380 2 83 3.91E-15 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABED_2021 52b37b7eeee10aba978aebd87454ac89 203 Gene3D G3DSA:2.40.30.20 1 79 1.4E-14 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_2021 52b37b7eeee10aba978aebd87454ac89 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 2 190 3.5E-65 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_2021 52b37b7eeee10aba978aebd87454ac89 203 Pfam PF00677 Lumazine binding domain 3 72 2.3E-13 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_2021 52b37b7eeee10aba978aebd87454ac89 203 Pfam PF00677 Lumazine binding domain 90 174 9.8E-26 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_2021 52b37b7eeee10aba978aebd87454ac89 203 SUPERFAMILY SSF63380 83 188 6.89E-33 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABED_2021 52b37b7eeee10aba978aebd87454ac89 203 PIRSF PIRSF000498 1 197 3.8E-67 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_2021 52b37b7eeee10aba978aebd87454ac89 203 Gene3D G3DSA:2.40.30.20 92 194 1.3E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_0267 6b971d60045ace2a7b54fa1dd5179fd4 276 Pfam PF13462 Thioredoxin 113 266 2.3E-14 T 14-10-2018 IPR012336 Thioredoxin-like fold ABED_0267 6b971d60045ace2a7b54fa1dd5179fd4 276 SUPERFAMILY SSF52833 105 263 5.42E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_0267 6b971d60045ace2a7b54fa1dd5179fd4 276 Gene3D G3DSA:3.40.30.10 91 271 3.9E-25 T 14-10-2018 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 754 32.96 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 752 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 309 3.8E-111 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 SUPERFAMILY SSF51726 403 751 7.72E-108 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 SUPERFAMILY SSF51726 6 392 1.03E-93 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 PIRSF PIRSF000382 1 755 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 Gene3D G3DSA:3.20.20.210 387 751 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 427 749 1.1E-144 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ABED_1835 2ae28b211130fff9dca4217ac8e9a98e 755 Gene3D G3DSA:3.20.20.210 6 520 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABED_0154 d6ec3491525046e839ee1aabc11de0bb 188 SUPERFAMILY SSF53474 4 173 7.53E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_0154 d6ec3491525046e839ee1aabc11de0bb 188 Gene3D G3DSA:3.40.50.1820 1 178 3.1E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_0154 d6ec3491525046e839ee1aabc11de0bb 188 Pfam PF06821 Serine hydrolase 5 170 2.5E-28 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 ABED_0577 866fe33d184b62d683706e0eeab87bab 657 Pfam PF12344 Ultra-violet resistance protein B 553 594 9.3E-20 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain ABED_0577 866fe33d184b62d683706e0eeab87bab 657 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 657 41.247 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ABED_0577 866fe33d184b62d683706e0eeab87bab 657 Gene3D G3DSA:3.40.50.300 1 241 5.0E-72 T 14-10-2018 ABED_0577 866fe33d184b62d683706e0eeab87bab 657 Gene3D G3DSA:3.40.50.300 416 590 2.5E-47 T 14-10-2018 ABED_0577 866fe33d184b62d683706e0eeab87bab 657 SMART SM00490 461 547 4.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0577 866fe33d184b62d683706e0eeab87bab 657 SUPERFAMILY SSF52540 3 416 1.99E-124 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0577 866fe33d184b62d683706e0eeab87bab 657 Pfam PF04851 Type III restriction enzyme, res subunit 14 118 6.6E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABED_0577 866fe33d184b62d683706e0eeab87bab 657 Pfam PF02151 UvrB/uvrC motif 622 656 2.7E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 ABED_0577 866fe33d184b62d683706e0eeab87bab 657 Pfam PF00271 Helicase conserved C-terminal domain 438 546 5.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0577 866fe33d184b62d683706e0eeab87bab 657 Gene3D G3DSA:3.40.50.300 259 415 1.6E-47 T 14-10-2018 ABED_0577 866fe33d184b62d683706e0eeab87bab 657 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 655 2.3E-299 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ABED_0577 866fe33d184b62d683706e0eeab87bab 657 SUPERFAMILY SSF52540 35 590 3.16E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0577 866fe33d184b62d683706e0eeab87bab 657 SUPERFAMILY SSF46600 613 656 1.96E-9 T 14-10-2018 IPR036876 UVR domain superfamily ABED_0577 866fe33d184b62d683706e0eeab87bab 657 SMART SM00487 8 426 1.9E-21 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 PRINTS PR00147 DNA photolyase signature 321 339 1.2E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 PRINTS PR00147 DNA photolyase signature 130 146 1.2E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 PRINTS PR00147 DNA photolyase signature 301 317 1.2E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 PRINTS PR00147 DNA photolyase signature 360 374 1.2E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 Pfam PF00875 DNA photolyase 4 146 3.0E-28 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 SUPERFAMILY SSF52425 4 160 1.19E-34 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 Gene3D G3DSA:1.25.40.80 121 271 4.8E-24 T 14-10-2018 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 Gene3D G3DSA:1.10.579.10 272 449 2.2E-61 T 14-10-2018 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 Gene3D G3DSA:3.40.50.620 1 115 2.8E-23 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 Pfam PF03441 FAD binding domain of DNA photolyase 254 443 1.2E-63 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 ABED_0762 b3c84d669d623fcee5d3d6565906dda5 450 SUPERFAMILY SSF48173 194 444 3.79E-81 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 ABED_0525 951192736b34dc390b4afb04d11b7565 702 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 12 668 8.9E-188 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 ABED_0525 951192736b34dc390b4afb04d11b7565 702 Pfam PF07670 Nucleoside recognition 357 449 1.6E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABED_0525 951192736b34dc390b4afb04d11b7565 702 Pfam PF07670 Nucleoside recognition 517 672 1.4E-34 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABED_0525 951192736b34dc390b4afb04d11b7565 702 Pfam PF07664 Ferrous iron transport protein B C terminus 460 511 3.3E-16 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 ABED_0525 951192736b34dc390b4afb04d11b7565 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 160 2.0E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_0525 951192736b34dc390b4afb04d11b7565 702 Gene3D G3DSA:3.40.50.300 5 189 4.5E-43 T 14-10-2018 ABED_0525 951192736b34dc390b4afb04d11b7565 702 SUPERFAMILY SSF52540 6 174 9.43E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0525 951192736b34dc390b4afb04d11b7565 702 Pfam PF02421 Ferrous iron transport protein B 6 161 5.4E-60 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 ABED_1347 f2be701d8edf96227c6d4db044589ec3 247 Pfam PF04333 MlaA lipoprotein 40 243 1.2E-64 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABED_1347 f2be701d8edf96227c6d4db044589ec3 247 PRINTS PR01805 VacJ lipoprotein signature 146 163 1.2E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABED_1347 f2be701d8edf96227c6d4db044589ec3 247 PRINTS PR01805 VacJ lipoprotein signature 58 74 1.2E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABED_1347 f2be701d8edf96227c6d4db044589ec3 247 PRINTS PR01805 VacJ lipoprotein signature 109 126 1.2E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABED_1347 f2be701d8edf96227c6d4db044589ec3 247 PRINTS PR01805 VacJ lipoprotein signature 41 54 1.2E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ABED_0987 35a3c076d96d38a252500330170d2ddc 262 Gene3D G3DSA:3.40.50.300 1 261 7.4E-51 T 14-10-2018 ABED_0987 35a3c076d96d38a252500330170d2ddc 262 Pfam PF00005 ABC transporter 19 175 2.2E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0987 35a3c076d96d38a252500330170d2ddc 262 SUPERFAMILY SSF52540 3 238 4.89E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0987 35a3c076d96d38a252500330170d2ddc 262 SMART SM00382 28 237 1.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1682 a011b867c0db491d0321565ec49752db 280 SUPERFAMILY SSF52540 4 228 7.87E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1682 a011b867c0db491d0321565ec49752db 280 Gene3D G3DSA:3.40.50.300 1 242 1.1E-44 T 14-10-2018 ABED_1682 a011b867c0db491d0321565ec49752db 280 Pfam PF00005 ABC transporter 24 159 9.9E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1682 a011b867c0db491d0321565ec49752db 280 SMART SM00382 32 212 7.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0889 375c6b46f2a887012241e00b29c53d52 542 Gene3D G3DSA:2.40.160.50 170 534 3.2E-65 T 14-10-2018 ABED_0889 375c6b46f2a887012241e00b29c53d52 542 PIRSF PIRSF029745 1 542 9.2E-162 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 ABED_0889 375c6b46f2a887012241e00b29c53d52 542 Pfam PF08479 POTRA domain, ShlB-type 68 142 5.3E-22 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type ABED_0889 375c6b46f2a887012241e00b29c53d52 542 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 197 504 6.8E-74 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal ABED_0889 375c6b46f2a887012241e00b29c53d52 542 Pfam PF17287 POTRA domain 144 192 5.7E-10 T 14-10-2018 IPR035251 ShlB, POTRA domain ABED_0889 375c6b46f2a887012241e00b29c53d52 542 Gene3D G3DSA:3.10.20.310 49 142 1.4E-15 T 14-10-2018 ABED_1787 b7233cb078d24a290391c63eadac7319 251 SUPERFAMILY SSF102705 2 243 1.44E-63 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ABED_1787 b7233cb078d24a290391c63eadac7319 251 Gene3D G3DSA:3.40.1390.30 98 205 3.5E-54 T 14-10-2018 ABED_1787 b7233cb078d24a290391c63eadac7319 251 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 230 7.2E-48 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ABED_1787 b7233cb078d24a290391c63eadac7319 251 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 226 2.6E-61 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ABED_1787 b7233cb078d24a290391c63eadac7319 251 Gene3D G3DSA:3.40.1390.30 4 213 3.5E-54 T 14-10-2018 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 SUPERFAMILY SSF54862 82 215 7.41E-32 T 14-10-2018 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 Gene3D G3DSA:2.20.25.90 220 278 1.0E-5 T 14-10-2018 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 1.2E-18 T 14-10-2018 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 Gene3D G3DSA:3.10.20.740 4 126 5.6E-39 T 14-10-2018 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 SMART SM00929 86 126 4.4E-17 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 SUPERFAMILY SSF53706 218 466 9.42E-21 T 14-10-2018 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 SUPERFAMILY SSF54292 5 126 1.05E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 86 125 1.9E-16 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0292 b7adbb8449b7a16c66bfbf2c1d2cc312 478 Gene3D G3DSA:3.30.70.20 131 209 4.7E-9 T 14-10-2018 ABED_2112 b95d1d7ca394d2e4fc8518e492be2c18 407 Pfam PF00563 EAL domain 176 399 2.0E-49 T 14-10-2018 IPR001633 EAL domain ABED_2112 b95d1d7ca394d2e4fc8518e492be2c18 407 SMART SM00052 168 404 1.6E-52 T 14-10-2018 IPR001633 EAL domain ABED_2112 b95d1d7ca394d2e4fc8518e492be2c18 407 Gene3D G3DSA:3.30.70.270 13 161 1.3E-9 T 14-10-2018 ABED_2112 b95d1d7ca394d2e4fc8518e492be2c18 407 SUPERFAMILY SSF141868 175 404 1.83E-59 T 14-10-2018 IPR035919 EAL domain superfamily ABED_2112 b95d1d7ca394d2e4fc8518e492be2c18 407 SUPERFAMILY SSF55073 30 153 1.26E-12 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_2112 b95d1d7ca394d2e4fc8518e492be2c18 407 Gene3D G3DSA:3.20.20.450 168 407 1.5E-60 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 Gene3D G3DSA:3.30.160.20 225 318 2.2E-94 T 14-10-2018 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 Pfam PF03462 PCRF domain 30 219 8.4E-56 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 Pfam PF00472 RF-1 domain 228 335 4.8E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 SMART SM00937 84 194 5.5E-51 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 361 6.5E-157 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 37.396 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 Gene3D G3DSA:1.20.58.410 4 115 2.1E-17 T 14-10-2018 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 SUPERFAMILY SSF75620 29 361 6.15E-125 T 14-10-2018 ABED_1878 05831e20916b3ab23558c22c3f1a9b28 365 Gene3D G3DSA:3.30.70.1660 129 356 2.2E-94 T 14-10-2018 ABED_1306 570c1283d4996373d119462ae4d3a0a6 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.1E-33 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 ABED_1306 570c1283d4996373d119462ae4d3a0a6 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 3.3E-33 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 ABED_1306 570c1283d4996373d119462ae4d3a0a6 113 Gene3D G3DSA:3.30.2320.80 1 113 1.6E-37 T 14-10-2018 ABED_1306 570c1283d4996373d119462ae4d3a0a6 113 PIRSF PIRSF004761 1 113 2.0E-36 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 ABED_1306 570c1283d4996373d119462ae4d3a0a6 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 21.313 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 ABED_1306 570c1283d4996373d119462ae4d3a0a6 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 14-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site ABED_1827 78c591fb2864abb8d8ff279a092da6e9 257 SUPERFAMILY SSF55811 100 238 4.6E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABED_1827 78c591fb2864abb8d8ff279a092da6e9 257 ProSitePatterns PS00893 Nudix box signature. 134 155 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABED_1827 78c591fb2864abb8d8ff279a092da6e9 257 Gene3D G3DSA:3.40.630.30 9 94 1.8E-14 T 14-10-2018 ABED_1827 78c591fb2864abb8d8ff279a092da6e9 257 Pfam PF00293 NUDIX domain 103 215 3.1E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABED_1827 78c591fb2864abb8d8ff279a092da6e9 257 Gene3D G3DSA:3.90.79.10 104 233 1.5E-28 T 14-10-2018 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 SUPERFAMILY SSF54980 396 510 8.63E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like ABED_2131 652080fec622124d11607eadf4d4e3d8 604 Pfam PF00679 Elongation factor G C-terminus 394 479 5.6E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like ABED_2131 652080fec622124d11607eadf4d4e3d8 604 Gene3D G3DSA:2.40.50.250 480 596 2.2E-123 T 14-10-2018 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 SUPERFAMILY SSF52540 2 198 7.02E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_2131 652080fec622124d11607eadf4d4e3d8 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 148 1.3E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 3.5E-281 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 Gene3D G3DSA:3.30.70.870 305 587 2.2E-123 T 14-10-2018 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 Pfam PF03144 Elongation factor Tu domain 2 218 288 5.0E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 SUPERFAMILY SSF54980 302 385 6.04E-8 T 14-10-2018 IPR035647 EF-G domain III/V-like ABED_2131 652080fec622124d11607eadf4d4e3d8 604 SUPERFAMILY SSF50447 151 299 4.01E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_2131 652080fec622124d11607eadf4d4e3d8 604 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 1.2E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 Gene3D G3DSA:2.40.30.10 199 298 4.5E-30 T 14-10-2018 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 Gene3D G3DSA:3.30.70.240 387 479 2.2E-123 T 14-10-2018 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 Gene3D G3DSA:3.40.50.300 1 197 1.9E-65 T 14-10-2018 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 PRINTS PR00315 GTP-binding elongation factor signature 122 131 2.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 PRINTS PR00315 GTP-binding elongation factor signature 70 80 2.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 PRINTS PR00315 GTP-binding elongation factor signature 50 58 2.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABED_2131 652080fec622124d11607eadf4d4e3d8 604 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site ABED_1500 08a70d298ffdfa660474e3f0d374588d 283 Pfam PF01435 Peptidase family M48 68 277 2.6E-37 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ABED_1500 08a70d298ffdfa660474e3f0d374588d 283 Gene3D G3DSA:3.30.2010.10 56 146 4.1E-30 T 14-10-2018 ABED_1500 08a70d298ffdfa660474e3f0d374588d 283 Hamap MF_00188 Protease HtpX [htpX]. 3 277 26.83 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 Gene3D G3DSA:3.50.50.60 3 304 6.0E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 Gene3D G3DSA:3.50.50.60 115 238 6.0E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 133 153 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 3.0E-31 T 14-10-2018 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 3.0E-31 T 14-10-2018 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 3.0E-31 T 14-10-2018 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.0E-31 T 14-10-2018 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 3.0E-31 T 14-10-2018 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 193 209 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 58 68 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 1.0E-57 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 308 3.3E-108 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 296 3.3E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABED_1896 07ba64560dafc7f3302f35c8c4af9ed7 309 SUPERFAMILY SSF51905 1 308 7.89E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1438 548ce585680015e4581f7b1ad6647af3 636 SUPERFAMILY SSF110942 520 630 2.48E-28 T 14-10-2018 IPR037196 HSP90, C-terminal domain ABED_1438 548ce585680015e4581f7b1ad6647af3 636 Gene3D G3DSA:3.30.70.2140 211 239 6.2E-77 T 14-10-2018 ABED_1438 548ce585680015e4581f7b1ad6647af3 636 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 153 2.6E-14 T 14-10-2018 ABED_1438 548ce585680015e4581f7b1ad6647af3 636 Gene3D G3DSA:3.40.50.11260 409 495 1.4E-23 T 14-10-2018 ABED_1438 548ce585680015e4581f7b1ad6647af3 636 Pfam PF00183 Hsp90 protein 212 634 6.0E-109 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ABED_1438 548ce585680015e4581f7b1ad6647af3 636 Gene3D G3DSA:3.30.565.10 3 210 6.2E-77 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1438 548ce585680015e4581f7b1ad6647af3 636 Gene3D G3DSA:3.30.230.80 257 408 1.4E-58 T 14-10-2018 ABED_1438 548ce585680015e4581f7b1ad6647af3 636 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 633 28.772 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ABED_1438 548ce585680015e4581f7b1ad6647af3 636 PRINTS PR00775 90kDa heat shock protein signature 119 141 3.0E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABED_1438 548ce585680015e4581f7b1ad6647af3 636 PRINTS PR00775 90kDa heat shock protein signature 74 91 3.0E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABED_1438 548ce585680015e4581f7b1ad6647af3 636 PRINTS PR00775 90kDa heat shock protein signature 2 22 3.0E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABED_1438 548ce585680015e4581f7b1ad6647af3 636 PRINTS PR00775 90kDa heat shock protein signature 92 109 3.0E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABED_1438 548ce585680015e4581f7b1ad6647af3 636 PRINTS PR00775 90kDa heat shock protein signature 23 45 3.0E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABED_1438 548ce585680015e4581f7b1ad6647af3 636 PRINTS PR00775 90kDa heat shock protein signature 169 186 3.0E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABED_1438 548ce585680015e4581f7b1ad6647af3 636 PRINTS PR00775 90kDa heat shock protein signature 188 206 3.0E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ABED_1438 548ce585680015e4581f7b1ad6647af3 636 SMART SM00387 24 181 2.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1438 548ce585680015e4581f7b1ad6647af3 636 PIRSF PIRSF002583 1 636 1.4E-194 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ABED_1438 548ce585680015e4581f7b1ad6647af3 636 Gene3D G3DSA:1.20.120.790 502 633 1.6E-37 T 14-10-2018 IPR037196 HSP90, C-terminal domain ABED_1438 548ce585680015e4581f7b1ad6647af3 636 SUPERFAMILY SSF55874 2 212 6.71E-61 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1438 548ce585680015e4581f7b1ad6647af3 636 SUPERFAMILY SSF54211 244 496 5.76E-82 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_0637 9caec360fdc3617a638a3a7200202081 272 Gene3D G3DSA:3.40.50.720 10 210 8.4E-36 T 14-10-2018 ABED_0637 9caec360fdc3617a638a3a7200202081 272 Gene3D G3DSA:3.90.25.10 147 244 8.4E-36 T 14-10-2018 ABED_0637 9caec360fdc3617a638a3a7200202081 272 SUPERFAMILY SSF51735 36 255 8.58E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0637 9caec360fdc3617a638a3a7200202081 272 Pfam PF01370 NAD dependent epimerase/dehydratase family 36 210 6.2E-24 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABED_0944 ebd3de309e0b8991cd4cd239052561e6 424 Gene3D G3DSA:2.70.70.10 300 423 9.2E-18 T 14-10-2018 IPR011055 Duplicated hybrid motif ABED_0944 ebd3de309e0b8991cd4cd239052561e6 424 SUPERFAMILY SSF51261 183 419 1.26E-21 T 14-10-2018 IPR011055 Duplicated hybrid motif ABED_0944 ebd3de309e0b8991cd4cd239052561e6 424 Pfam PF01551 Peptidase family M23 336 416 1.2E-14 T 14-10-2018 IPR016047 Peptidase M23 ABED_1199 b4446b5512729c42152dee253a37e1cc 75 Pfam PF00550 Phosphopantetheine attachment site 20 71 8.5E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABED_1199 b4446b5512729c42152dee253a37e1cc 75 SUPERFAMILY SSF47336 4 74 5.5E-13 T 14-10-2018 IPR036736 ACP-like superfamily ABED_1199 b4446b5512729c42152dee253a37e1cc 75 Gene3D G3DSA:1.10.1200.10 2 75 1.9E-16 T 14-10-2018 IPR036736 ACP-like superfamily ABED_0134 bf426e63958576d08ae6908b78861d7d 182 SUPERFAMILY SSF53335 6 175 9.98E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0134 bf426e63958576d08ae6908b78861d7d 182 Gene3D G3DSA:3.40.50.150 54 181 6.0E-8 T 14-10-2018 ABED_0134 bf426e63958576d08ae6908b78861d7d 182 Gene3D G3DSA:3.40.50.150 2 53 1.3E-5 T 14-10-2018 ABED_0134 bf426e63958576d08ae6908b78861d7d 182 Pfam PF01564 Spermine/spermidine synthase domain 6 50 6.6E-6 T 14-10-2018 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 1.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 SUPERFAMILY SSF158472 186 233 4.84E-5 T 14-10-2018 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 SUPERFAMILY SSF55874 291 455 1.31E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 Gene3D G3DSA:1.10.287.130 187 303 8.2E-22 T 14-10-2018 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 2.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 2.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 2.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 SMART SM00387 347 458 9.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 SUPERFAMILY SSF47384 219 300 4.12E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 455 3.8E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 SMART SM00388 236 302 3.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0408 47f251342b97d5e21f68f54c131f6f1d 458 Gene3D G3DSA:3.30.565.10 307 458 2.2E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0165 132359f0329a75ce5670f22884a4754f 401 Pfam PF07690 Major Facilitator Superfamily 17 362 3.3E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_0165 132359f0329a75ce5670f22884a4754f 401 Gene3D G3DSA:1.20.1250.20 3 196 7.0E-22 T 14-10-2018 ABED_0165 132359f0329a75ce5670f22884a4754f 401 Gene3D G3DSA:1.20.1250.20 211 400 1.2E-16 T 14-10-2018 ABED_0165 132359f0329a75ce5670f22884a4754f 401 SUPERFAMILY SSF103473 5 396 1.44E-53 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_0209 e23b2b361cbb6972b3abb6f85d0f5a7d 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 256 279 3.3E-13 T 14-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 ABED_0209 e23b2b361cbb6972b3abb6f85d0f5a7d 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 3.3E-13 T 14-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 ABED_0209 e23b2b361cbb6972b3abb6f85d0f5a7d 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 3.3E-13 T 14-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 ABED_0209 e23b2b361cbb6972b3abb6f85d0f5a7d 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 143 168 3.3E-13 T 14-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 ABED_0209 e23b2b361cbb6972b3abb6f85d0f5a7d 280 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 29 280 7.5E-92 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 ABED_0209 e23b2b361cbb6972b3abb6f85d0f5a7d 280 Gene3D G3DSA:2.40.230.20 22 280 5.0E-88 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 ABED_0209 e23b2b361cbb6972b3abb6f85d0f5a7d 280 SUPERFAMILY SSF111364 32 280 7.98E-76 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 Gene3D G3DSA:3.30.565.10 307 457 6.9E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 SMART SM00387 346 458 2.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 SUPERFAMILY SSF55874 307 455 1.3E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 Gene3D G3DSA:1.10.287.130 212 301 1.1E-11 T 14-10-2018 ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 70 184 5.4E-12 T 14-10-2018 IPR000014 PAS domain ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 Gene3D G3DSA:3.30.450.20 65 187 1.3E-15 T 14-10-2018 ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 1.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 1.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 1.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 SUPERFAMILY SSF47384 230 303 1.63E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 SMART SM00091 74 139 0.0018 T 14-10-2018 IPR000014 PAS domain ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 456 6.0E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1062 4eac7fe8426717a22e90e32e8ae04db2 459 SUPERFAMILY SSF55785 68 174 6.11E-14 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 Pfam PF00106 short chain dehydrogenase 3 191 4.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 SUPERFAMILY SSF51735 3 199 1.03E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 PIRSF PIRSF000126 1 257 4.3E-64 T 14-10-2018 ABED_1810 4060fb5b379a45d62fcf6e9949f8a843 258 Gene3D G3DSA:3.40.50.720 2 229 1.2E-50 T 14-10-2018 ABED_1059 6659286269c9f578e2c723696de397be 291 SMART SM00267 118 291 5.5E-36 T 14-10-2018 IPR000160 GGDEF domain ABED_1059 6659286269c9f578e2c723696de397be 291 Gene3D G3DSA:3.30.70.270 131 291 5.1E-46 T 14-10-2018 ABED_1059 6659286269c9f578e2c723696de397be 291 Gene3D G3DSA:1.20.120.30 6 130 1.4E-5 T 14-10-2018 ABED_1059 6659286269c9f578e2c723696de397be 291 Pfam PF00990 Diguanylate cyclase, GGDEF domain 133 288 1.8E-39 T 14-10-2018 IPR000160 GGDEF domain ABED_1059 6659286269c9f578e2c723696de397be 291 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 290 9.5E-45 T 14-10-2018 IPR000160 GGDEF domain ABED_1059 6659286269c9f578e2c723696de397be 291 SUPERFAMILY SSF55073 137 290 2.82E-41 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0853 fcd34b0e572c6794f4bbb0232a11572b 219 Gene3D G3DSA:1.10.10.10 132 219 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0853 fcd34b0e572c6794f4bbb0232a11572b 219 SMART SM00448 2 113 1.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0853 fcd34b0e572c6794f4bbb0232a11572b 219 SMART SM00862 147 217 1.7E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0853 fcd34b0e572c6794f4bbb0232a11572b 219 Pfam PF00072 Response regulator receiver domain 4 113 6.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0853 fcd34b0e572c6794f4bbb0232a11572b 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 217 8.7E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0853 fcd34b0e572c6794f4bbb0232a11572b 219 SUPERFAMILY SSF52172 1 175 2.42E-35 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0853 fcd34b0e572c6794f4bbb0232a11572b 219 Gene3D G3DSA:3.40.50.2300 1 126 2.4E-32 T 14-10-2018 ABED_0362 44280663a8189c70101ed203afc9d63d 432 SUPERFAMILY SSF51735 161 308 1.29E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0362 44280663a8189c70101ed203afc9d63d 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 414 1.2E-110 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0362 44280663a8189c70101ed203afc9d63d 432 SUPERFAMILY SSF69075 314 414 1.2E-8 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0362 44280663a8189c70101ed203afc9d63d 432 Gene3D G3DSA:3.40.50.720 162 308 7.5E-33 T 14-10-2018 ABED_0362 44280663a8189c70101ed203afc9d63d 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0362 44280663a8189c70101ed203afc9d63d 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 3.6E-37 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0362 44280663a8189c70101ed203afc9d63d 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 317 414 3.5E-14 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0362 44280663a8189c70101ed203afc9d63d 432 SUPERFAMILY SSF69742 1 158 4.58E-39 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0362 44280663a8189c70101ed203afc9d63d 432 PIRSF PIRSF000445 1 428 3.6E-117 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0362 44280663a8189c70101ed203afc9d63d 432 Gene3D G3DSA:3.30.460.30 2 159 8.8E-44 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0362 44280663a8189c70101ed203afc9d63d 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 173 302 2.2E-32 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ABED_0362 44280663a8189c70101ed203afc9d63d 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 415 24.87 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABED_0496 84e18bdf4d7e70fefb8297127f37f5ed 323 Gene3D G3DSA:1.50.10.150 10 322 1.2E-85 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily ABED_0496 84e18bdf4d7e70fefb8297127f37f5ed 323 Pfam PF03595 Voltage-dependent anion channel 16 311 4.8E-55 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 ABED_1614 15f6335886706f832db8ae905519d727 244 Pfam PF00581 Rhodanese-like domain 144 235 5.5E-7 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_1614 15f6335886706f832db8ae905519d727 244 SUPERFAMILY SSF52821 137 236 1.26E-15 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_1614 15f6335886706f832db8ae905519d727 244 Gene3D G3DSA:3.90.460.10 7 123 1.5E-18 T 14-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 ABED_1614 15f6335886706f832db8ae905519d727 244 SUPERFAMILY SSF57662 13 104 5.62E-23 T 14-10-2018 IPR036644 Ferredoxin thioredoxin reductase catalytic beta subunit superfamily GO:0016730|GO:0055114 ABED_1614 15f6335886706f832db8ae905519d727 244 Pfam PF02943 Ferredoxin thioredoxin reductase catalytic beta chain 15 116 1.1E-32 T 14-10-2018 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 ABED_1614 15f6335886706f832db8ae905519d727 244 SMART SM00450 143 241 3.3E-8 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_1614 15f6335886706f832db8ae905519d727 244 Gene3D G3DSA:3.40.250.10 136 242 1.1E-13 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_0931 676c95a32cd102bc57ef9bcda9e78a60 785 Gene3D G3DSA:3.55.50.30 23 117 5.1E-7 T 14-10-2018 ABED_0931 676c95a32cd102bc57ef9bcda9e78a60 785 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 142 785 2.7E-86 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_0931 676c95a32cd102bc57ef9bcda9e78a60 785 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 240 1.0E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_0931 676c95a32cd102bc57ef9bcda9e78a60 785 Gene3D G3DSA:2.40.170.20 253 785 1.1E-77 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_0931 676c95a32cd102bc57ef9bcda9e78a60 785 Pfam PF00593 TonB dependent receptor 323 783 7.5E-33 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_0931 676c95a32cd102bc57ef9bcda9e78a60 785 Gene3D G3DSA:2.170.130.10 119 248 9.6E-22 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_0931 676c95a32cd102bc57ef9bcda9e78a60 785 SUPERFAMILY SSF56935 104 785 2.62E-96 T 14-10-2018 ABED_0931 676c95a32cd102bc57ef9bcda9e78a60 785 SMART SM00965 47 97 2.8E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABED_1461 0d4ba9a93a7f241c62b82320cbdd94eb 433 SUPERFAMILY SSF51569 18 324 4.21E-89 T 14-10-2018 ABED_1461 0d4ba9a93a7f241c62b82320cbdd94eb 433 Gene3D G3DSA:3.30.160.270 373 431 7.2E-12 T 14-10-2018 ABED_1461 0d4ba9a93a7f241c62b82320cbdd94eb 433 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 35 51 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_1461 0d4ba9a93a7f241c62b82320cbdd94eb 433 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 237 250 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_1461 0d4ba9a93a7f241c62b82320cbdd94eb 433 Gene3D G3DSA:3.20.20.70 6 372 9.1E-137 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1461 0d4ba9a93a7f241c62b82320cbdd94eb 433 Pfam PF00682 HMGL-like 28 305 1.3E-69 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 Gene3D G3DSA:3.40.50.620 28 627 2.9E-222 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 Gene3D G3DSA:3.90.740.10 195 396 2.9E-222 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 639 5.7E-213 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 909 19.159 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 819 4.6E-272 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 Gene3D G3DSA:1.10.730.20 638 909 1.8E-60 T 14-10-2018 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 SUPERFAMILY SSF50677 207 393 4.4E-46 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 559 568 1.8E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 224 247 1.8E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 523 536 1.8E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.8E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 389 404 1.8E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 Pfam PF08264 Anticodon-binding domain of tRNA 680 778 2.4E-14 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 SUPERFAMILY SSF47323 650 909 4.36E-42 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0486 abe776ea7590ac9df66ba7f243aa17e0 909 SUPERFAMILY SSF52374 1 645 1.24E-133 T 14-10-2018 ABED_0660 465834563ec220588efd66f51938e9bf 159 SUPERFAMILY SSF48403 20 153 6.53E-25 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_0660 465834563ec220588efd66f51938e9bf 159 SMART SM00248 113 142 0.12 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0660 465834563ec220588efd66f51938e9bf 159 SMART SM00248 49 78 0.032 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0660 465834563ec220588efd66f51938e9bf 159 SMART SM00248 80 109 150.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0660 465834563ec220588efd66f51938e9bf 159 Gene3D G3DSA:1.25.40.20 4 158 1.3E-23 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_0660 465834563ec220588efd66f51938e9bf 159 Pfam PF00023 Ankyrin repeat 116 144 1.9E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0660 465834563ec220588efd66f51938e9bf 159 Pfam PF12796 Ankyrin repeats (3 copies) 39 110 6.3E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain ABED_1013 0fc16a8afbfbd95ec2eb33499bddbc2f 211 Gene3D G3DSA:3.40.109.10 3 209 7.8E-56 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABED_1013 0fc16a8afbfbd95ec2eb33499bddbc2f 211 SUPERFAMILY SSF55469 5 208 7.98E-56 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABED_1013 0fc16a8afbfbd95ec2eb33499bddbc2f 211 Pfam PF00881 Nitroreductase family 10 190 6.3E-31 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABED_0675 f8cc4be8b2096c7c55395d1a0acd74a7 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 45.003 T 14-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 ABED_0675 f8cc4be8b2096c7c55395d1a0acd74a7 226 SMART SM00702 1 177 5.2E-22 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ABED_0675 f8cc4be8b2096c7c55395d1a0acd74a7 226 Gene3D G3DSA:4.10.860.20 180 226 5.9E-13 T 14-10-2018 ABED_0675 f8cc4be8b2096c7c55395d1a0acd74a7 226 SUPERFAMILY SSF51197 3 179 2.33E-8 T 14-10-2018 ABED_0675 f8cc4be8b2096c7c55395d1a0acd74a7 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 5.6E-14 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ABED_0675 f8cc4be8b2096c7c55395d1a0acd74a7 226 Gene3D G3DSA:2.60.120.620 1 178 2.2E-43 T 14-10-2018 ABED_1815 4a7c906b71bfcc8449856f7ca2a943da 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 320 4.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABED_1815 4a7c906b71bfcc8449856f7ca2a943da 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 304 4.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABED_1815 4a7c906b71bfcc8449856f7ca2a943da 326 SUPERFAMILY SSF46689 224 272 1.61E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_1815 4a7c906b71bfcc8449856f7ca2a943da 326 SMART SM00342 238 320 1.4E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1815 4a7c906b71bfcc8449856f7ca2a943da 326 Gene3D G3DSA:1.10.10.60 217 324 3.7E-25 T 14-10-2018 ABED_1815 4a7c906b71bfcc8449856f7ca2a943da 326 Pfam PF12833 Helix-turn-helix domain 247 321 3.7E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1815 4a7c906b71bfcc8449856f7ca2a943da 326 SUPERFAMILY SSF46689 274 323 1.88E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0998 4b18144ae0245e771c2638ddc3d4c149 293 SUPERFAMILY SSF103481 40 140 5.1E-11 T 14-10-2018 ABED_0998 4b18144ae0245e771c2638ddc3d4c149 293 Pfam PF00892 EamA-like transporter family 7 138 1.6E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_0998 4b18144ae0245e771c2638ddc3d4c149 293 Pfam PF00892 EamA-like transporter family 153 290 6.2E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_0436 41eb38ac2d1943559f24289113ba3af7 230 Gene3D G3DSA:2.40.30.170 25 206 1.2E-27 T 14-10-2018 ABED_0436 41eb38ac2d1943559f24289113ba3af7 230 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 30 155 1.4E-7 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_0436 41eb38ac2d1943559f24289113ba3af7 230 Gene3D G3DSA:2.40.50.100 29 159 1.2E-27 T 14-10-2018 ABED_0436 41eb38ac2d1943559f24289113ba3af7 230 Gene3D G3DSA:1.10.287.470 63 124 1.2E-27 T 14-10-2018 ABED_0436 41eb38ac2d1943559f24289113ba3af7 230 SUPERFAMILY SSF111369 25 177 1.1E-15 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Pfam PF00623 RNA polymerase Rpb1, domain 2 401 499 1.4E-28 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Pfam PF00623 RNA polymerase Rpb1, domain 2 358 400 9.8E-9 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Pfam PF04998 RNA polymerase Rpb1, domain 5 756 1444 3.9E-68 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 13 1510 18.753 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 SMART SM00663 249 528 2.9E-173 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Gene3D G3DSA:1.10.274.100 504 564 9.2E-21 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Gene3D G3DSA:1.10.40.90 388 430 1.5E-18 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Gene3D G3DSA:2.40.50.100 1170 1260 1.4E-17 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Gene3D G3DSA:1.10.150.390 1449 1511 3.9E-23 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 SUPERFAMILY SSF64484 20 1498 0.0 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 26 1500 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Gene3D G3DSA:2.40.50.100 1285 1348 3.7E-62 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Pfam PF04983 RNA polymerase Rpb1, domain 3 503 645 1.3E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Gene3D G3DSA:1.10.1790.20 1269 1446 3.7E-62 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Pfam PF04997 RNA polymerase Rpb1, domain 1 21 356 2.4E-85 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 753 2.2E-16 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Gene3D G3DSA:1.10.274.100 565 641 9.5E-18 T 14-10-2018 ABED_1704 580de0fa9e715af1269d3df2f0da3cb5 1511 Gene3D G3DSA:1.10.132.30 642 780 2.4E-63 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 Gene3D G3DSA:3.40.50.300 285 532 9.5E-59 T 14-10-2018 ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 Pfam PF00005 ABC transporter 336 467 3.7E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 SMART SM00382 345 512 4.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 SMART SM00382 26 229 1.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 SUPERFAMILY SSF52540 6 238 1.04E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 Pfam PF12848 ABC transporter 225 309 6.6E-18 T 14-10-2018 IPR032781 ABC-transporter extension domain ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 Pfam PF00005 ABC transporter 18 185 4.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 SUPERFAMILY SSF52540 305 523 1.38E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1015 870a9f47e09fbef03ed9fe02ac556473 532 Gene3D G3DSA:3.40.50.300 2 284 1.6E-56 T 14-10-2018 ABED_0617 e85b04bce3caa133512cfc96a42e2a97 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 274 2.0E-45 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABED_0617 e85b04bce3caa133512cfc96a42e2a97 396 SUPERFAMILY SSF51735 33 289 4.38E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0617 e85b04bce3caa133512cfc96a42e2a97 396 Gene3D G3DSA:3.90.25.40 201 311 5.4E-159 T 14-10-2018 ABED_0617 e85b04bce3caa133512cfc96a42e2a97 396 Gene3D G3DSA:3.40.50.720 9 371 5.4E-159 T 14-10-2018 ABED_1354 057091d4c427a0741795357d536e8166 136 Pfam PF02600 Disulfide bond formation protein DsbB 4 110 2.6E-11 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 ABED_1354 057091d4c427a0741795357d536e8166 136 Gene3D G3DSA:1.20.1550.10 1 108 6.9E-12 T 14-10-2018 IPR023380 DsbB-like superfamily ABED_1354 057091d4c427a0741795357d536e8166 136 PIRSF PIRSF036659 1 135 1.1E-44 T 14-10-2018 IPR012187 Disulphide bond formation protein BdbC ABED_1354 057091d4c427a0741795357d536e8166 136 SUPERFAMILY SSF158442 4 128 2.35E-28 T 14-10-2018 IPR023380 DsbB-like superfamily ABED_0460 2bb73e8fbadf22ae074fa66d6deffbd7 345 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 342 35.926 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABED_0460 2bb73e8fbadf22ae074fa66d6deffbd7 345 Gene3D G3DSA:2.40.30.10 269 345 1.1E-16 T 14-10-2018 ABED_0460 2bb73e8fbadf22ae074fa66d6deffbd7 345 Gene3D G3DSA:3.40.50.620 1 201 9.3E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0460 2bb73e8fbadf22ae074fa66d6deffbd7 345 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 341 5.0E-98 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABED_0460 2bb73e8fbadf22ae074fa66d6deffbd7 345 Pfam PF03054 tRNA methyl transferase 4 341 1.2E-103 T 14-10-2018 ABED_0460 2bb73e8fbadf22ae074fa66d6deffbd7 345 Gene3D G3DSA:2.30.30.280 207 267 2.1E-17 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABED_0460 2bb73e8fbadf22ae074fa66d6deffbd7 345 SUPERFAMILY SSF52402 2 236 2.21E-51 T 14-10-2018 ABED_1113 a9c36da2577652fb05325ba32e908d9d 122 Gene3D G3DSA:3.40.50.2300 1 122 5.5E-34 T 14-10-2018 ABED_1113 a9c36da2577652fb05325ba32e908d9d 122 SMART SM00448 2 116 2.5E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1113 a9c36da2577652fb05325ba32e908d9d 122 Pfam PF00072 Response regulator receiver domain 5 117 2.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1113 a9c36da2577652fb05325ba32e908d9d 122 SUPERFAMILY SSF52172 1 121 3.27E-34 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1369 99c4fc3e1685839af64e0a33c2eed5b7 389 Gene3D G3DSA:3.40.640.10 48 292 1.6E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1369 99c4fc3e1685839af64e0a33c2eed5b7 389 SUPERFAMILY SSF53383 4 385 1.12E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1369 99c4fc3e1685839af64e0a33c2eed5b7 389 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 210 247 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_1369 99c4fc3e1685839af64e0a33c2eed5b7 389 PIRSF PIRSF000521 159 387 1.6E-25 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_1369 99c4fc3e1685839af64e0a33c2eed5b7 389 PIRSF PIRSF000521 10 155 5.7E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_1369 99c4fc3e1685839af64e0a33c2eed5b7 389 Gene3D G3DSA:3.90.1150.10 2 375 1.6E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1369 99c4fc3e1685839af64e0a33c2eed5b7 389 Pfam PF00202 Aminotransferase class-III 14 383 3.3E-84 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_0340 30b81affa23cb5f432ece2a5e291dc58 243 SUPERFAMILY SSF53790 2 242 2.62E-73 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ABED_0340 30b81affa23cb5f432ece2a5e291dc58 243 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABED_0340 30b81affa23cb5f432ece2a5e291dc58 243 Gene3D G3DSA:3.30.950.10 118 243 6.1E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ABED_0340 30b81affa23cb5f432ece2a5e291dc58 243 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 236 3.0E-91 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABED_0340 30b81affa23cb5f432ece2a5e291dc58 243 Gene3D G3DSA:3.40.1010.10 2 117 3.4E-42 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ABED_0340 30b81affa23cb5f432ece2a5e291dc58 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 214 1.4E-48 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ABED_1492 25c906f74a8962b41da8468598b688f5 363 Hamap MF_01454 GTPase Obg [obg]. 1 360 44.796 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ABED_1492 25c906f74a8962b41da8468598b688f5 363 PIRSF PIRSF002401 1 357 5.1E-123 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type ABED_1492 25c906f74a8962b41da8468598b688f5 363 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 302 4.7E-123 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ABED_1492 25c906f74a8962b41da8468598b688f5 363 SUPERFAMILY SSF82051 1 157 3.01E-52 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily ABED_1492 25c906f74a8962b41da8468598b688f5 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 6.0E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1492 25c906f74a8962b41da8468598b688f5 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 6.0E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1492 25c906f74a8962b41da8468598b688f5 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 6.0E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1492 25c906f74a8962b41da8468598b688f5 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 6.0E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1492 25c906f74a8962b41da8468598b688f5 363 Gene3D G3DSA:2.70.210.12 1 157 2.4E-53 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily ABED_1492 25c906f74a8962b41da8468598b688f5 363 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 ABED_1492 25c906f74a8962b41da8468598b688f5 363 Pfam PF01926 50S ribosome-binding GTPase 160 280 1.7E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1492 25c906f74a8962b41da8468598b688f5 363 Pfam PF01018 GTP1/OBG 3 157 3.3E-54 T 14-10-2018 IPR006169 GTP1/OBG domain ABED_1492 25c906f74a8962b41da8468598b688f5 363 SUPERFAMILY SSF52540 151 359 3.05E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 SUPERFAMILY SSF53067 158 397 1.73E-82 T 14-10-2018 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 Gene3D G3DSA:3.30.420.40 197 403 5.0E-76 T 14-10-2018 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 Hamap MF_00020 Acetate kinase [ackA]. 1 399 175.513 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 PRINTS PR00471 Acetate kinase family signature 174 187 6.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 PRINTS PR00471 Acetate kinase family signature 3 14 6.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 PRINTS PR00471 Acetate kinase family signature 322 338 6.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 PRINTS PR00471 Acetate kinase family signature 377 389 6.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 PRINTS PR00471 Acetate kinase family signature 300 313 6.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 PRINTS PR00471 Acetate kinase family signature 203 224 6.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 SUPERFAMILY SSF53067 1 196 2.72E-66 T 14-10-2018 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 Pfam PF00871 Acetokinase family 3 389 4.8E-150 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 Gene3D G3DSA:3.30.420.40 1 196 2.7E-69 T 14-10-2018 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 PIRSF PIRSF000722 1 400 5.6E-145 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0467 19918540d1d69667a1a1279af5ccd1ba 404 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.0E-151 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_1929 6be18c9d68982e447c595ebb1e3683c5 236 Pfam PF00121 Triosephosphate isomerase 3 229 1.4E-62 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1929 6be18c9d68982e447c595ebb1e3683c5 236 Gene3D G3DSA:3.20.20.70 2 232 3.8E-68 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1929 6be18c9d68982e447c595ebb1e3683c5 236 ProSitePatterns PS00171 Triosephosphate isomerase active site. 158 168 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1929 6be18c9d68982e447c595ebb1e3683c5 236 SUPERFAMILY SSF51351 2 232 1.24E-64 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1033 ba43ff79957a3e9979a5dcf94084ea58 284 SUPERFAMILY SSF55874 141 277 3.01E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1033 ba43ff79957a3e9979a5dcf94084ea58 284 SMART SM00387 178 282 2.6E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1033 ba43ff79957a3e9979a5dcf94084ea58 284 Gene3D G3DSA:1.10.287.130 82 135 5.6E-24 T 14-10-2018 ABED_1033 ba43ff79957a3e9979a5dcf94084ea58 284 Gene3D G3DSA:3.30.565.10 136 278 5.6E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1033 ba43ff79957a3e9979a5dcf94084ea58 284 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 179 279 1.6E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1033 ba43ff79957a3e9979a5dcf94084ea58 284 SUPERFAMILY SSF47384 67 135 4.12E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0923 6d444184c1a024e06785977427de8c7d 190 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABED_0923 6d444184c1a024e06785977427de8c7d 190 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 153 165 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABED_0923 6d444184c1a024e06785977427de8c7d 190 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 1 190 35.88 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABED_0923 6d444184c1a024e06785977427de8c7d 190 Gene3D G3DSA:3.30.230.40 88 190 5.1E-33 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ABED_0923 6d444184c1a024e06785977427de8c7d 190 SUPERFAMILY SSF54211 3 80 3.04E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_0923 6d444184c1a024e06785977427de8c7d 190 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 171 4.3E-58 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABED_0923 6d444184c1a024e06785977427de8c7d 190 SUPERFAMILY SSF54211 86 175 8.85E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_0923 6d444184c1a024e06785977427de8c7d 190 Gene3D G3DSA:3.30.230.40 1 87 5.9E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ABED_0645 9ad6907c96d218f1e167d44ed259b63f 190 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 179 2.0E-57 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ABED_0645 9ad6907c96d218f1e167d44ed259b63f 190 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 179 1.0E-44 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ABED_0645 9ad6907c96d218f1e167d44ed259b63f 190 SUPERFAMILY SSF51182 1 187 1.42E-60 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_0645 9ad6907c96d218f1e167d44ed259b63f 190 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 177 3.7E-58 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ABED_0645 9ad6907c96d218f1e167d44ed259b63f 190 Gene3D G3DSA:2.60.120.10 1 187 2.1E-59 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0655 8bfea6f44274be1d99229b3b33bf7863 142 Pfam PF01618 MotA/TolQ/ExbB proton channel family 54 138 1.6E-24 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABED_0655 8bfea6f44274be1d99229b3b33bf7863 142 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 6 139 6.7E-44 T 14-10-2018 IPR014172 TonB-system energizer ExbB type-2 GO:0016020|GO:0055085 ABED_0592 a00cc06de32737f214f244d5e3b98f06 151 Gene3D G3DSA:3.40.1400.10 1 143 1.4E-60 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABED_0592 a00cc06de32737f214f244d5e3b98f06 151 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 143 1.1E-58 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABED_0592 a00cc06de32737f214f244d5e3b98f06 151 SUPERFAMILY SSF89623 1 143 1.83E-56 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABED_0592 a00cc06de32737f214f244d5e3b98f06 151 Pfam PF02502 Ribose/Galactose Isomerase 4 140 5.2E-56 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABED_0592 a00cc06de32737f214f244d5e3b98f06 151 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 142 8.8E-61 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 ABED_0592 a00cc06de32737f214f244d5e3b98f06 151 PIRSF PIRSF005384 1 146 6.1E-57 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABED_1524 3dbb6d8e7951f39193d5b2546c9736d0 396 Pfam PF01551 Peptidase family M23 242 338 9.5E-32 T 14-10-2018 IPR016047 Peptidase M23 ABED_1524 3dbb6d8e7951f39193d5b2546c9736d0 396 Gene3D G3DSA:3.10.450.350 117 365 1.1E-86 T 14-10-2018 ABED_1524 3dbb6d8e7951f39193d5b2546c9736d0 396 SUPERFAMILY SSF51261 89 342 4.36E-60 T 14-10-2018 IPR011055 Duplicated hybrid motif ABED_1524 3dbb6d8e7951f39193d5b2546c9736d0 396 Gene3D G3DSA:2.70.70.10 213 346 1.1E-86 T 14-10-2018 IPR011055 Duplicated hybrid motif ABED_0730 2ac0f61ade0b30b15ae75deb13a6297b 141 Pfam PF13508 Acetyltransferase (GNAT) domain 46 119 1.2E-14 T 14-10-2018 IPR000182 GNAT domain ABED_0730 2ac0f61ade0b30b15ae75deb13a6297b 141 SUPERFAMILY SSF55729 1 137 3.49E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0730 2ac0f61ade0b30b15ae75deb13a6297b 141 Gene3D G3DSA:3.40.630.30 1 138 9.7E-32 T 14-10-2018 ABED_0801 901b1d48d6c2e660e27d5c23f663a39b 77 SMART SM00530 16 74 0.0017 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_0801 901b1d48d6c2e660e27d5c23f663a39b 77 SUPERFAMILY SSF47413 6 75 2.44E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABED_0801 901b1d48d6c2e660e27d5c23f663a39b 77 Pfam PF01381 Helix-turn-helix 18 74 6.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_0801 901b1d48d6c2e660e27d5c23f663a39b 77 Gene3D G3DSA:1.10.260.40 1 77 2.4E-11 T 14-10-2018 ABED_1651 d1ade497df9f15f8331624a4de0d77d0 296 Gene3D G3DSA:3.90.550.10 1 296 4.2E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1651 d1ade497df9f15f8331624a4de0d77d0 296 Pfam PF00483 Nucleotidyl transferase 2 241 6.9E-69 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABED_1651 d1ade497df9f15f8331624a4de0d77d0 296 SUPERFAMILY SSF53448 1 286 4.33E-89 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1651 d1ade497df9f15f8331624a4de0d77d0 296 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 4.2E-146 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 ABED_0695 3756b199deb9e0fa76a1540493f157b6 478 SUPERFAMILY SSF53244 356 470 1.79E-17 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_0695 3756b199deb9e0fa76a1540493f157b6 478 Pfam PF08245 Mur ligase middle domain 162 336 7.1E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABED_0695 3756b199deb9e0fa76a1540493f157b6 478 SUPERFAMILY SSF53623 156 353 1.26E-29 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_0695 3756b199deb9e0fa76a1540493f157b6 478 Gene3D G3DSA:3.40.1190.10 147 353 1.8E-31 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_0695 3756b199deb9e0fa76a1540493f157b6 478 Gene3D G3DSA:3.90.190.20 355 471 9.0E-9 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_1909 2ce82994185cc8214063f37f67b849ac 223 SUPERFAMILY SSF52540 1 222 4.17E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1909 2ce82994185cc8214063f37f67b849ac 223 Pfam PF00005 ABC transporter 22 171 6.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1909 2ce82994185cc8214063f37f67b849ac 223 Gene3D G3DSA:3.40.50.300 1 223 7.4E-59 T 14-10-2018 ABED_1909 2ce82994185cc8214063f37f67b849ac 223 SMART SM00382 31 220 7.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1515 1b39291c5438a7b057bc2f75a9f6aacc 119 SUPERFAMILY SSF51316 4 118 3.19E-47 T 14-10-2018 IPR011057 Mss4-like superfamily ABED_1515 1b39291c5438a7b057bc2f75a9f6aacc 119 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 118 1.6E-35 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABED_1515 1b39291c5438a7b057bc2f75a9f6aacc 119 Gene3D G3DSA:2.170.150.20 1 119 3.9E-47 T 14-10-2018 ABED_1515 1b39291c5438a7b057bc2f75a9f6aacc 119 Pfam PF01641 SelR domain 4 117 5.6E-45 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABED_1295 7c70025e2ddeb1ebe95ed7c79df14e76 209 Gene3D G3DSA:3.40.470.10 12 192 4.5E-10 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_1295 7c70025e2ddeb1ebe95ed7c79df14e76 209 SUPERFAMILY SSF52141 39 171 1.16E-5 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_0769 cf3bb79e1f1f12a6c9e916114b908a88 466 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 278 432 1.9E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0769 cf3bb79e1f1f12a6c9e916114b908a88 466 Gene3D G3DSA:1.10.287.950 165 465 8.2E-57 T 14-10-2018 ABED_0769 cf3bb79e1f1f12a6c9e916114b908a88 466 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 344 373 6.3E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0769 cf3bb79e1f1f12a6c9e916114b908a88 466 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 238 267 6.3E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0769 cf3bb79e1f1f12a6c9e916114b908a88 466 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 342 6.3E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0769 cf3bb79e1f1f12a6c9e916114b908a88 466 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 6.3E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0769 cf3bb79e1f1f12a6c9e916114b908a88 466 SUPERFAMILY SSF58104 237 464 1.83E-54 T 14-10-2018 ABED_0769 cf3bb79e1f1f12a6c9e916114b908a88 466 SMART SM00283 217 464 4.3E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0725 e53511a411bdd79fec2400fef6b99e54 585 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 7 567 48.989 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 ABED_0725 e53511a411bdd79fec2400fef6b99e54 585 Gene3D G3DSA:3.80.30.20 296 568 3.7E-16 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABED_0725 e53511a411bdd79fec2400fef6b99e54 585 SUPERFAMILY SSF102114 302 543 5.3E-12 T 14-10-2018 ABED_0725 e53511a411bdd79fec2400fef6b99e54 585 SMART SM00729 296 552 1.4E-7 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_0725 e53511a411bdd79fec2400fef6b99e54 585 Pfam PF08497 Radical SAM N-terminal 7 299 2.5E-119 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal ABED_0725 e53511a411bdd79fec2400fef6b99e54 585 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 7 565 8.7E-239 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 ABED_0725 e53511a411bdd79fec2400fef6b99e54 585 Pfam PF04055 Radical SAM superfamily 303 510 5.6E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_0725 e53511a411bdd79fec2400fef6b99e54 585 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 300 320 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 Gene3D G3DSA:3.30.1040.50 101 147 9.8E-7 T 14-10-2018 ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 Pfam PF16448 LapD/MoxY periplasmic domain 25 144 7.1E-30 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 Gene3D G3DSA:3.30.70.270 220 390 7.6E-17 T 14-10-2018 ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 SMART SM00052 398 622 4.2E-4 T 14-10-2018 IPR001633 EAL domain ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 SUPERFAMILY SSF55073 242 389 7.14E-12 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 Gene3D G3DSA:3.20.20.450 396 621 8.1E-18 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 SMART SM00267 228 390 6.4E-4 T 14-10-2018 IPR000160 GGDEF domain ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 SUPERFAMILY SSF141868 440 618 4.97E-16 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 385 3.9E-12 T 14-10-2018 IPR000160 GGDEF domain ABED_1069 452d814c1d92c87260b0cd503f8532ea 624 Pfam PF00563 EAL domain 441 620 4.2E-17 T 14-10-2018 IPR001633 EAL domain ABED_1858 651b91c63680a5ba94a56f4d3abd02c5 425 PIRSF PIRSF000505 3 425 2.5E-107 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABED_1858 651b91c63680a5ba94a56f4d3abd02c5 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 19 421 4.4E-112 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ABED_1858 651b91c63680a5ba94a56f4d3abd02c5 425 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABED_1858 651b91c63680a5ba94a56f4d3abd02c5 425 Gene3D G3DSA:3.65.10.10 20 419 6.3E-126 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABED_1858 651b91c63680a5ba94a56f4d3abd02c5 425 SUPERFAMILY SSF55205 20 424 5.56E-112 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ABED_1858 651b91c63680a5ba94a56f4d3abd02c5 425 Gene3D G3DSA:3.65.10.10 24 233 6.3E-126 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABED_1858 651b91c63680a5ba94a56f4d3abd02c5 425 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 20 424 3.9E-119 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABED_1858 651b91c63680a5ba94a56f4d3abd02c5 425 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 12 425 28.938 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABED_0097 b7e9ba594132bd6c03c8e12a039408b1 215 Gene3D G3DSA:1.10.150.240 16 82 2.9E-45 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABED_0097 b7e9ba594132bd6c03c8e12a039408b1 215 Gene3D G3DSA:3.40.50.1000 5 197 2.9E-45 T 14-10-2018 IPR023214 HAD superfamily ABED_0097 b7e9ba594132bd6c03c8e12a039408b1 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 4.0E-37 T 14-10-2018 ABED_0097 b7e9ba594132bd6c03c8e12a039408b1 215 SUPERFAMILY SSF56784 3 212 2.94E-45 T 14-10-2018 IPR036412 HAD-like superfamily ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 Gene3D G3DSA:3.40.50.12780 5 433 3.7E-104 T 14-10-2018 ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 14-10-2018 IPR020845 AMP-binding, conserved site ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 SUPERFAMILY SSF56801 29 536 6.02E-133 T 14-10-2018 ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 Gene3D G3DSA:3.30.300.30 434 531 5.6E-22 T 14-10-2018 ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 SUPERFAMILY SSF51621 550 777 1.54E-46 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 Gene3D G3DSA:3.20.20.60 532 836 2.4E-71 T 14-10-2018 ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 Pfam PF00501 AMP-binding enzyme 30 438 1.3E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 553 766 3.5E-33 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ABED_1734 478f1a0f7bd5c1d6197068e775362207 839 Pfam PF13193 AMP-binding enzyme C-terminal domain 447 523 7.4E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABED_1207 f7b3e8eafb36feba3e0570a0856bbffb 190 SUPERFAMILY SSF111304 5 190 9.02E-54 T 14-10-2018 IPR023627 Recombination protein RecR ABED_1207 f7b3e8eafb36feba3e0570a0856bbffb 190 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 ABED_1207 f7b3e8eafb36feba3e0570a0856bbffb 190 Hamap MF_00017 Recombination protein RecR [recR]. 1 190 56.895 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ABED_1207 f7b3e8eafb36feba3e0570a0856bbffb 190 TIGRFAM TIGR00615 recR: recombination protein RecR 6 187 4.7E-54 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ABED_1207 f7b3e8eafb36feba3e0570a0856bbffb 190 Gene3D G3DSA:1.10.8.420 5 53 1.1E-8 T 14-10-2018 ABED_1207 f7b3e8eafb36feba3e0570a0856bbffb 190 Pfam PF02132 RecR protein 43 79 5.3E-12 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger ABED_1207 f7b3e8eafb36feba3e0570a0856bbffb 190 Gene3D G3DSA:3.40.1360.10 78 190 1.2E-21 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 SUPERFAMILY SSF103491 3 407 3.4E-110 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 416 26.901 T 14-10-2018 IPR026593 Protein translocase subunit SecY ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 411 1.7E-108 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 Pfam PF00344 SecY translocase 62 400 9.4E-99 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 167 190 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 385 403 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 259 278 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 298 320 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 353 371 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 141 166 2.2E-85 T 14-10-2018 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 Gene3D G3DSA:1.10.3370.10 1 412 4.8E-139 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 ProSitePatterns PS00756 Protein secY signature 2. 160 177 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_0718 c61a4aa5c4f94ac8fae650a93b9e9c44 420 PIRSF PIRSF004557 1 419 1.2E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_0276 92a6cc34e7eacf5c89c69aeabfb374a8 50 SUPERFAMILY SSF57829 1 50 7.94E-13 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ABED_0276 92a6cc34e7eacf5c89c69aeabfb374a8 50 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 49 13.934 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0276 92a6cc34e7eacf5c89c69aeabfb374a8 50 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 50 1.4E-16 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0276 92a6cc34e7eacf5c89c69aeabfb374a8 50 Pfam PF01783 Ribosomal L32p protein family 2 50 7.7E-12 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0214 25dd88c4e408b6a8c089f3ecf83c37a1 376 SUPERFAMILY SSF53383 29 375 5.23E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0214 25dd88c4e408b6a8c089f3ecf83c37a1 376 Gene3D G3DSA:3.90.1150.10 8 364 3.7E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0214 25dd88c4e408b6a8c089f3ecf83c37a1 376 Pfam PF00155 Aminotransferase class I and II 28 369 1.3E-34 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABED_0214 25dd88c4e408b6a8c089f3ecf83c37a1 376 Gene3D G3DSA:3.40.640.10 38 280 3.7E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 1373 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Pfam PF10385 RNA polymerase beta subunit external 1 domain 609 674 1.2E-18 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Pfam PF00562 RNA polymerase Rpb2, domain 6 736 1297 2.9E-146 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:2.40.270.10 1021 1276 3.0E-76 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:3.90.1110.10 161 254 1.4E-24 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:3.90.1110.10 339 459 1.5E-29 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:2.40.270.10 807 848 1.9E-5 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:3.90.1800.10 1286 1340 4.9E-10 T 14-10-2018 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 226 1.4E-11 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Pfam PF04561 RNA polymerase Rpb2, domain 2 373 470 5.6E-18 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:3.90.1100.10 662 731 2.2E-18 T 14-10-2018 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 SUPERFAMILY SSF64484 11 1376 0.0 T 14-10-2018 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1376 11.51 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:2.40.50.100 732 806 7.3E-23 T 14-10-2018 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Pfam PF04560 RNA polymerase Rpb2, domain 7 1300 1374 8.5E-24 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:2.40.50.150 849 965 6.3E-37 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Pfam PF04563 RNA polymerase beta subunit 27 518 6.6E-20 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1095 1107 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Pfam PF04565 RNA polymerase Rpb2, domain 3 531 599 3.3E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:3.90.1100.10 19 160 7.7E-42 T 14-10-2018 ABED_1705 0161dfdd96ef1f9789f6ee1852d8bb7d 1382 Gene3D G3DSA:3.90.1100.10 460 642 2.9E-64 T 14-10-2018 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 SUPERFAMILY SSF55271 14 135 1.31E-12 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 Pfam PF05192 MutS domain III 309 612 1.3E-23 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 SMART SM00534 692 882 2.2E-51 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 Gene3D G3DSA:3.40.1170.10 15 140 7.8E-12 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 Gene3D G3DSA:1.10.1420.10 423 557 2.8E-29 T 14-10-2018 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 PIRSF PIRSF037677 34 932 8.8E-69 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 SUPERFAMILY SSF53150 142 319 1.57E-5 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 Pfam PF00488 MutS domain V 696 884 9.6E-43 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 Gene3D G3DSA:1.10.1420.10 309 612 2.8E-29 T 14-10-2018 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 SUPERFAMILY SSF48334 309 618 1.96E-31 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 SMART SM00533 320 650 1.1E-26 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 SUPERFAMILY SSF52540 622 886 2.13E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 Pfam PF01624 MutS domain I 31 138 4.4E-9 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABED_0434 a01faab60f78adcb43c3450b1c2ba329 985 Gene3D G3DSA:3.40.50.300 622 913 1.5E-63 T 14-10-2018 ABED_1632 31bb406d2af4b1ec137eb253693377b2 306 SUPERFAMILY SSF53756 1 285 8.32E-51 T 14-10-2018 ABED_1632 31bb406d2af4b1ec137eb253693377b2 306 Gene3D G3DSA:3.40.50.2000 149 304 7.9E-15 T 14-10-2018 ABED_1632 31bb406d2af4b1ec137eb253693377b2 306 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 175 280 6.1E-11 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 ABED_1632 31bb406d2af4b1ec137eb253693377b2 306 Gene3D G3DSA:3.40.50.2000 1 141 3.4E-23 T 14-10-2018 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Gene3D G3DSA:3.40.1360.10 226 347 8.6E-35 T 14-10-2018 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 SMART SM00493 244 315 2.9E-19 T 14-10-2018 IPR006171 TOPRIM domain ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 TIGRFAM TIGR01391 dnaG: DNA primase 1 400 1.1E-129 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Pfam PF01807 CHC2 zinc finger 3 97 2.2E-37 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Pfam PF13662 Toprim domain 245 313 3.3E-16 T 14-10-2018 IPR006171 TOPRIM domain ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Pfam PF16730 DnaG-primase C-terminal, helicase-binding domain 425 540 2.5E-41 T 14-10-2018 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 PIRSF PIRSF002811 1 543 7.0E-137 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 SMART SM00400 33 87 2.4E-33 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Gene3D G3DSA:3.90.980.10 99 225 7.1E-32 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Gene3D G3DSA:3.90.580.10 2 98 1.4E-36 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Pfam PF08275 DNA primase catalytic core, N-terminal domain 121 236 1.6E-32 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Gene3D G3DSA:1.10.860.10 420 543 6.4E-32 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 SUPERFAMILY SSF56731 107 405 3.66E-82 T 14-10-2018 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 Hamap MF_00974 DNA primase [dnaG]. 1 496 26.002 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ABED_1495 4e5883c5ecf5c19047ea2b1356f171b4 544 SUPERFAMILY SSF57783 1 96 7.14E-35 T 14-10-2018 ABED_0255 24ba6963f8ecc712e576ba94bdc16ae6 329 SUPERFAMILY SSF103088 185 309 6.67E-17 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0255 24ba6963f8ecc712e576ba94bdc16ae6 329 Pfam PF00691 OmpA family 195 275 8.3E-14 T 14-10-2018 IPR006665 OmpA-like domain ABED_0255 24ba6963f8ecc712e576ba94bdc16ae6 329 Gene3D G3DSA:3.30.1330.60 177 320 2.0E-19 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0141 82e46ee2b59f320c5b90a456e55dbf05 286 Gene3D G3DSA:1.20.120.1780 165 286 6.9E-32 T 14-10-2018 ABED_0141 82e46ee2b59f320c5b90a456e55dbf05 286 Gene3D G3DSA:1.10.357.140 14 164 6.0E-46 T 14-10-2018 ABED_0141 82e46ee2b59f320c5b90a456e55dbf05 286 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 7 285 3.2E-94 T 14-10-2018 IPR006371 4-hydroxybenzoate polyprenyltransferase-related ABED_0141 82e46ee2b59f320c5b90a456e55dbf05 286 Pfam PF01040 UbiA prenyltransferase family 24 265 1.2E-49 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ABED_0015 f80a5ab38b659684ded6a54ec4d3fa45 275 SUPERFAMILY SSF53850 82 263 5.79E-18 T 14-10-2018 ABED_0015 f80a5ab38b659684ded6a54ec4d3fa45 275 SUPERFAMILY SSF46785 1 84 5.28E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0015 f80a5ab38b659684ded6a54ec4d3fa45 275 Gene3D G3DSA:3.40.190.290 85 269 1.4E-16 T 14-10-2018 ABED_0015 f80a5ab38b659684ded6a54ec4d3fa45 275 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_0015 f80a5ab38b659684ded6a54ec4d3fa45 275 Gene3D G3DSA:1.10.10.10 1 84 2.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0015 f80a5ab38b659684ded6a54ec4d3fa45 275 Pfam PF03466 LysR substrate binding domain 90 261 6.9E-20 T 14-10-2018 IPR005119 LysR, substrate-binding ABED_0306 8bc773a4f1856e5a0f0005ada6e944f8 230 Gene3D G3DSA:3.40.50.150 34 228 1.4E-29 T 14-10-2018 ABED_0306 8bc773a4f1856e5a0f0005ada6e944f8 230 Gene3D G3DSA:2.20.25.110 132 191 1.4E-29 T 14-10-2018 ABED_0306 8bc773a4f1856e5a0f0005ada6e944f8 230 Pfam PF13489 Methyltransferase domain 32 209 5.9E-12 T 14-10-2018 ABED_0306 8bc773a4f1856e5a0f0005ada6e944f8 230 SUPERFAMILY SSF53335 21 223 6.18E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0339 e36093d1f2a291eb3710b8bfc1592211 160 SUPERFAMILY SSF89562 1 158 1.06E-33 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ABED_0339 e36093d1f2a291eb3710b8bfc1592211 160 Pfam PF03737 Aldolase/RraA 5 154 1.2E-33 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ABED_0339 e36093d1f2a291eb3710b8bfc1592211 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 155 5.3E-40 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 ABED_0339 e36093d1f2a291eb3710b8bfc1592211 160 Gene3D G3DSA:3.50.30.40 1 160 8.0E-48 T 14-10-2018 ABED_1491 fa5546ad232157fb6839df514a51989b 254 Hamap MF_00456 Glutamate 5-kinase [proB]. 2 254 31.293 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 PIRSF PIRSF000729 1 254 7.2E-78 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ABED_1491 fa5546ad232157fb6839df514a51989b 254 PRINTS PR00474 Glutamate 5-kinase family signature 112 133 1.3E-44 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 PRINTS PR00474 Glutamate 5-kinase family signature 72 100 1.3E-44 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 PRINTS PR00474 Glutamate 5-kinase family signature 40 54 1.3E-44 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 PRINTS PR00474 Glutamate 5-kinase family signature 143 170 1.3E-44 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 PRINTS PR00474 Glutamate 5-kinase family signature 204 224 1.3E-44 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 TIGRFAM TIGR01027 proB: glutamate 5-kinase 2 253 9.5E-74 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 SUPERFAMILY SSF53633 2 252 2.88E-62 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABED_1491 fa5546ad232157fb6839df514a51989b 254 ProSitePatterns PS00902 Glutamate 5-kinase signature. 202 219 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 Pfam PF00696 Amino acid kinase family 2 228 5.0E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABED_1491 fa5546ad232157fb6839df514a51989b 254 Gene3D G3DSA:3.40.1160.10 1 253 2.6E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABED_0055 fb27600b67f5d66a7e8474521a591dec 227 Gene3D G3DSA:3.30.110.170 30 215 2.7E-8 T 14-10-2018 ABED_0055 fb27600b67f5d66a7e8474521a591dec 227 Pfam PF04402 Protein of unknown function (DUF541) 27 217 5.0E-16 T 14-10-2018 IPR007497 Protein of unknown function DUF541 ABED_0055 fb27600b67f5d66a7e8474521a591dec 227 Gene3D G3DSA:3.30.70.2970 32 140 2.7E-8 T 14-10-2018 ABED_0353 ed3df7a4bcf30b710eab98681caef1eb 498 Gene3D G3DSA:3.40.309.10 259 456 7.3E-159 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABED_0353 ed3df7a4bcf30b710eab98681caef1eb 498 Gene3D G3DSA:3.40.605.10 16 484 7.3E-159 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABED_0353 ed3df7a4bcf30b710eab98681caef1eb 498 SUPERFAMILY SSF53720 6 490 2.62E-157 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABED_0353 ed3df7a4bcf30b710eab98681caef1eb 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABED_0353 ed3df7a4bcf30b710eab98681caef1eb 498 Pfam PF00171 Aldehyde dehydrogenase family 20 486 1.5E-158 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABED_0353 ed3df7a4bcf30b710eab98681caef1eb 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABED_0938 ffbeac63c020ad3672ed6a1d839ec275 241 Gene3D G3DSA:2.40.30.170 23 236 1.1E-44 T 14-10-2018 ABED_0938 ffbeac63c020ad3672ed6a1d839ec275 241 SUPERFAMILY SSF111369 18 236 1.12E-27 T 14-10-2018 ABED_0938 ffbeac63c020ad3672ed6a1d839ec275 241 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 18 229 2.7E-25 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_0938 ffbeac63c020ad3672ed6a1d839ec275 241 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 16 238 6.9E-33 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABED_0938 ffbeac63c020ad3672ed6a1d839ec275 241 Gene3D G3DSA:1.10.287.470 63 126 1.1E-44 T 14-10-2018 ABED_0938 ffbeac63c020ad3672ed6a1d839ec275 241 Gene3D G3DSA:2.40.50.100 29 161 1.1E-44 T 14-10-2018 ABED_0809 786650974460eaedd930e3aff607d8f2 1052 SMART SM00487 270 476 2.6E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_0809 786650974460eaedd930e3aff607d8f2 1052 Pfam PF04851 Type III restriction enzyme, res subunit 273 444 8.5E-19 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABED_0809 786650974460eaedd930e3aff607d8f2 1052 Gene3D G3DSA:3.40.50.300 466 727 1.6E-43 T 14-10-2018 ABED_0809 786650974460eaedd930e3aff607d8f2 1052 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 197 1.1E-35 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 ABED_0809 786650974460eaedd930e3aff607d8f2 1052 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 20 722 8.5E-173 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 ABED_0809 786650974460eaedd930e3aff607d8f2 1052 Gene3D G3DSA:3.90.1570.50 91 271 1.4E-20 T 14-10-2018 ABED_0809 786650974460eaedd930e3aff607d8f2 1052 SUPERFAMILY SSF52540 294 708 1.33E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0809 786650974460eaedd930e3aff607d8f2 1052 Gene3D G3DSA:3.40.50.300 273 464 3.4E-53 T 14-10-2018 ABED_0809 786650974460eaedd930e3aff607d8f2 1052 SUPERFAMILY SSF52540 243 474 4.22E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1864 e9ce25180db896321642871d046323b8 76 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site ABED_1864 e9ce25180db896321642871d046323b8 76 SUPERFAMILY SSF47336 2 74 3.27E-22 T 14-10-2018 IPR036736 ACP-like superfamily ABED_1864 e9ce25180db896321642871d046323b8 76 Pfam PF00550 Phosphopantetheine attachment site 6 72 8.0E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABED_1864 e9ce25180db896321642871d046323b8 76 Gene3D G3DSA:1.10.1200.10 1 76 4.1E-28 T 14-10-2018 IPR036736 ACP-like superfamily ABED_1864 e9ce25180db896321642871d046323b8 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 4.6E-34 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABED_1864 e9ce25180db896321642871d046323b8 76 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 22.126 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABED_1864 e9ce25180db896321642871d046323b8 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 74 1.0E-9 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABED_1132 b4f7767ae60f675cf22ff141134045d1 276 SUPERFAMILY SSF48179 169 275 3.29E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABED_1132 b4f7767ae60f675cf22ff141134045d1 276 Pfam PF02153 Prephenate dehydrogenase 15 267 2.2E-75 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 ABED_1132 b4f7767ae60f675cf22ff141134045d1 276 SUPERFAMILY SSF51735 2 165 1.98E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1132 b4f7767ae60f675cf22ff141134045d1 276 Gene3D G3DSA:1.10.3660.10 172 275 6.5E-36 T 14-10-2018 ABED_1132 b4f7767ae60f675cf22ff141134045d1 276 Gene3D G3DSA:3.40.50.720 1 171 4.4E-42 T 14-10-2018 ABED_1525 f48603d8ee40a5a7348938880a866f39 190 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 64 80 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABED_1525 f48603d8ee40a5a7348938880a866f39 190 Gene3D G3DSA:1.10.286.10 4 53 5.4E-19 T 14-10-2018 ABED_1525 f48603d8ee40a5a7348938880a866f39 190 SUPERFAMILY SSF55620 5 184 1.93E-80 T 14-10-2018 ABED_1525 f48603d8ee40a5a7348938880a866f39 190 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 184 2.8E-79 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABED_1525 f48603d8ee40a5a7348938880a866f39 190 Pfam PF01227 GTP cyclohydrolase I 8 184 8.6E-80 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABED_1525 f48603d8ee40a5a7348938880a866f39 190 Gene3D G3DSA:3.30.1130.10 55 188 2.0E-60 T 14-10-2018 ABED_1525 f48603d8ee40a5a7348938880a866f39 190 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 185 40.112 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 7 444 7.3E-188 T 14-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 Gene3D G3DSA:3.90.1580.10 181 459 1.1E-18 T 14-10-2018 ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 Pfam PF08241 Methyltransferase domain 499 622 5.6E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 SUPERFAMILY SSF53335 458 636 8.98E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 459 642 7.9E-56 T 14-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 Pfam PF03781 Sulfatase-modifying factor enzyme 1 217 445 5.6E-19 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 Gene3D G3DSA:3.40.50.150 474 665 2.4E-20 T 14-10-2018 ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 SUPERFAMILY SSF56436 191 446 8.29E-46 T 14-10-2018 IPR016187 C-type lectin fold ABED_1177 3f85f6c67e29ecdcacc3503d7186af3f 674 Pfam PF12867 DinB superfamily 28 161 3.7E-7 T 14-10-2018 IPR024775 DinB-like domain ABED_1052 31c60f2b548232f92a54ce4176c9aa97 82 Pfam PF06518 Protein of unknown function (DUF1104) 21 77 3.3E-6 T 14-10-2018 IPR009488 Protein of unknown function DUF1104 ABED_1052 31c60f2b548232f92a54ce4176c9aa97 82 Gene3D G3DSA:1.20.120.1430 11 82 3.9E-7 T 14-10-2018 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.6E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.6E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.6E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.6E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.027 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 Gene3D G3DSA:3.90.1170.10 1 141 6.8E-53 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 SUPERFAMILY SSF54686 1 137 5.23E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.3E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 5.1E-57 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0706 9234eed6028a0f7f73f684fc0163b9e0 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1715 6c95d91564c5f0de79a081f44de7b1ea 353 ProSitePatterns PS01348 MraY family signature 2. 182 193 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1715 6c95d91564c5f0de79a081f44de7b1ea 353 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 63 75 7.8E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1715 6c95d91564c5f0de79a081f44de7b1ea 353 Pfam PF00953 Glycosyl transferase family 4 95 277 2.9E-34 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ABED_1715 6c95d91564c5f0de79a081f44de7b1ea 353 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 32 353 2.3E-120 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1715 6c95d91564c5f0de79a081f44de7b1ea 353 ProSitePatterns PS01347 MraY family signature 1. 63 75 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1715 6c95d91564c5f0de79a081f44de7b1ea 353 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 20 351 22.918 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_0354 2400e224152c7e051f7f65c169a43b31 129 Pfam PF05610 Protein of unknown function (DUF779) 15 111 1.2E-35 T 14-10-2018 IPR008497 Protein of unknown function DUF779 ABED_0354 2400e224152c7e051f7f65c169a43b31 129 PIRSF PIRSF009151 1 126 2.3E-37 T 14-10-2018 IPR008497 Protein of unknown function DUF779 ABED_1466 f887509ff7713c041e5fe685bebd1421 306 SMART SM01131 179 305 2.6E-58 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABED_1466 f887509ff7713c041e5fe685bebd1421 306 Gene3D G3DSA:3.10.310.20 190 306 7.5E-37 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABED_1466 f887509ff7713c041e5fe685bebd1421 306 Pfam PF02833 DHHA2 domain 180 302 1.9E-22 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABED_1466 f887509ff7713c041e5fe685bebd1421 306 SUPERFAMILY SSF64182 5 304 5.49E-72 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily ABED_1466 f887509ff7713c041e5fe685bebd1421 306 Pfam PF01368 DHH family 4 143 4.6E-19 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABED_1466 f887509ff7713c041e5fe685bebd1421 306 Gene3D G3DSA:3.90.1640.10 2 186 7.0E-64 T 14-10-2018 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 Pfam PF00750 tRNA synthetases class I (R) 86 423 7.9E-22 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 529 23.77 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 SUPERFAMILY SSF55190 4 97 1.01E-20 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 Pfam PF05746 DALR anticodon binding domain 415 529 2.2E-20 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 Gene3D G3DSA:3.40.50.620 105 409 2.0E-155 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 529 3.9E-133 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 SMART SM00836 415 529 1.1E-21 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 PRINTS PR01038 Arginyl-tRNA synthetase signature 144 157 8.0E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 PRINTS PR01038 Arginyl-tRNA synthetase signature 284 305 8.0E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 136 8.0E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 PRINTS PR01038 Arginyl-tRNA synthetase signature 105 120 8.0E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 SMART SM01016 3 77 2.9E-26 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 115 124 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 Gene3D G3DSA:3.30.1360.70 1 101 4.0E-26 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 SUPERFAMILY SSF47323 409 529 1.05E-19 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 Gene3D G3DSA:1.10.730.10 410 529 2.0E-155 T 14-10-2018 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 SUPERFAMILY SSF52374 100 425 1.93E-82 T 14-10-2018 ABED_1924 65bb6df4e0a963555c45c2a2fda79105 529 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 2 77 3.9E-19 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABED_1376 5e6df77147f8e29c114b0f33ad982d73 221 Gene3D G3DSA:3.40.50.880 1 220 2.7E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_1376 5e6df77147f8e29c114b0f33ad982d73 221 SUPERFAMILY SSF52317 14 183 6.81E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_1376 5e6df77147f8e29c114b0f33ad982d73 221 Pfam PF00117 Glutamine amidotransferase class-I 20 171 2.0E-16 T 14-10-2018 IPR017926 Glutamine amidotransferase ABED_1849 aaba812429f1a8ef3b1340a53ca6a668 95 SUPERFAMILY SSF64376 6 48 1.44E-6 T 14-10-2018 IPR035931 YlxR-like superfamily ABED_1849 aaba812429f1a8ef3b1340a53ca6a668 95 Pfam PF04296 Protein of unknown function (DUF448) 9 52 2.8E-5 T 14-10-2018 IPR007393 Domain of unknown function DUF448 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 505 520 1.5E-6 T 14-10-2018 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 157 1.5E-6 T 14-10-2018 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.5E-6 T 14-10-2018 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 SMART SM01228 543 614 6.1E-31 T 14-10-2018 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 621 39.641 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 Gene3D G3DSA:1.10.10.1800 457 557 1.9E-7 T 14-10-2018 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 Pfam PF13932 GidA associated domain 399 612 1.9E-70 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 Pfam PF01134 Glucose inhibited division protein A 4 397 2.7E-157 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3 616 5.4E-265 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 SUPERFAMILY SSF51905 1 256 1.42E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 Gene3D G3DSA:3.50.50.60 1 214 4.6E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 Gene3D G3DSA:3.50.50.60 293 456 4.1E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_2020 a71e5de96d76781e8554dcd07262d77a 625 Gene3D G3DSA:1.10.150.570 566 618 1.5E-16 T 14-10-2018 ABED_0649 af7c824cf0284bfefd5f17eeabc2ff27 185 Pfam PF00156 Phosphoribosyl transferase domain 36 162 1.5E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABED_0649 af7c824cf0284bfefd5f17eeabc2ff27 185 Gene3D G3DSA:3.40.50.2020 3 185 1.3E-51 T 14-10-2018 ABED_0649 af7c824cf0284bfefd5f17eeabc2ff27 185 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 185 32.121 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 ABED_0649 af7c824cf0284bfefd5f17eeabc2ff27 185 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 16 184 8.3E-62 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 ABED_0649 af7c824cf0284bfefd5f17eeabc2ff27 185 SUPERFAMILY SSF53271 19 176 1.25E-41 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 SUPERFAMILY SSF52540 5 186 1.28E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 Pfam PF07664 Ferrous iron transport protein B C terminus 462 515 1.2E-14 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 Gene3D G3DSA:3.40.50.300 5 199 1.0E-44 T 14-10-2018 ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 Pfam PF07670 Nucleoside recognition 521 750 4.4E-16 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 Pfam PF07670 Nucleoside recognition 354 447 3.6E-11 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 Pfam PF02421 Ferrous iron transport protein B 5 158 8.0E-64 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 5.3E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 5.3E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 159 1.9E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1685 acf27f2c5cc8a7fa6cf1385b864b850b 818 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 552 1.4E-129 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 ABED_1429 5c0d208eb7cf296a2146f20142527b25 458 SMART SM00670 4 140 3.6E-4 T 14-10-2018 IPR002716 PIN domain ABED_1429 5c0d208eb7cf296a2146f20142527b25 458 Pfam PF02562 PhoH-like protein 229 453 7.9E-42 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 ABED_1429 5c0d208eb7cf296a2146f20142527b25 458 Pfam PF13638 PIN domain 6 152 7.4E-21 T 14-10-2018 IPR002716 PIN domain ABED_1429 5c0d208eb7cf296a2146f20142527b25 458 Gene3D G3DSA:3.40.50.300 226 454 4.2E-38 T 14-10-2018 ABED_1429 5c0d208eb7cf296a2146f20142527b25 458 Gene3D G3DSA:3.40.50.1010 1 155 5.6E-12 T 14-10-2018 ABED_1429 5c0d208eb7cf296a2146f20142527b25 458 SUPERFAMILY SSF52540 14 422 4.99E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 PIRSF PIRSF039088 3 505 5.0E-254 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 Gene3D G3DSA:3.40.50.300 96 373 4.3E-129 T 14-10-2018 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 503 51.601 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 94 1.9E-13 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 Gene3D G3DSA:2.40.30.20 3 95 3.4E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 373 498 1.2E-45 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 502 2.0E-257 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 SUPERFAMILY SSF52540 98 372 5.32E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 SUPERFAMILY SSF47917 374 502 2.62E-44 T 14-10-2018 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 SUPERFAMILY SSF50615 12 95 3.4E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 Gene3D G3DSA:1.20.150.20 374 504 3.9E-48 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1482 3542e71c342d9c7e25cf48e1f8cb2c76 505 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 366 4.0E-77 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 SMART SM01383 42 118 3.0E-41 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.644 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 SUPERFAMILY SSF50104 127 273 1.08E-60 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 Gene3D G3DSA:4.10.950.10 197 275 3.0E-34 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 SMART SM01382 125 253 9.8E-89 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 251 2.4E-55 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 116 6.8E-30 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 Gene3D G3DSA:2.40.50.140 1 114 9.9E-40 T 14-10-2018 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 SUPERFAMILY SSF50249 2 118 4.11E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 PIRSF PIRSF002158 3 275 2.8E-94 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 Gene3D G3DSA:2.30.30.30 120 196 1.1E-30 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABED_0702 74ce21f54b6c8ebce0e38cb552f7d6c4 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 4.9E-128 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ABED_0468 8dcf5e16f213070c1c09d8037895d699 331 SUPERFAMILY SSF53659 2 330 1.36E-93 T 14-10-2018 ABED_0468 8dcf5e16f213070c1c09d8037895d699 331 Gene3D G3DSA:3.40.50.10750 143 303 2.1E-132 T 14-10-2018 ABED_0468 8dcf5e16f213070c1c09d8037895d699 331 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 327 4.1E-119 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABED_0468 8dcf5e16f213070c1c09d8037895d699 331 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 327 1.7E-112 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABED_0468 8dcf5e16f213070c1c09d8037895d699 331 PIRSF PIRSF000428 1 331 2.2E-111 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABED_0468 8dcf5e16f213070c1c09d8037895d699 331 Gene3D G3DSA:3.40.50.10950 9 329 2.1E-132 T 14-10-2018 ABED_0824 99d7269d50c5dc8960fdd1d1081178d4 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 83 1.4E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABED_0824 99d7269d50c5dc8960fdd1d1081178d4 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABED_0824 99d7269d50c5dc8960fdd1d1081178d4 181 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 7 178 7.8E-46 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ABED_0824 99d7269d50c5dc8960fdd1d1081178d4 181 Gene3D G3DSA:1.20.120.1760 7 176 2.3E-11 T 14-10-2018 ABED_0824 99d7269d50c5dc8960fdd1d1081178d4 181 PIRSF PIRSF000847 3 181 1.9E-44 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ABED_1973 2813ed85914ac22ffff5449a625a12e8 433 Pfam PF00266 Aminotransferase class-V 32 424 7.9E-48 T 14-10-2018 IPR000192 Aminotransferase class V domain ABED_1973 2813ed85914ac22ffff5449a625a12e8 433 Gene3D G3DSA:3.40.640.10 41 290 2.2E-38 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1973 2813ed85914ac22ffff5449a625a12e8 433 SUPERFAMILY SSF53383 21 432 1.69E-66 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1973 2813ed85914ac22ffff5449a625a12e8 433 Gene3D G3DSA:3.90.1150.10 297 433 1.4E-29 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1679 fd4d950c37f3afeda6ace766e4137535 156 Gene3D G3DSA:3.40.50.960 1 155 2.3E-55 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1679 fd4d950c37f3afeda6ace766e4137535 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 8.7E-56 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1679 fd4d950c37f3afeda6ace766e4137535 156 SUPERFAMILY SSF52121 10 154 1.31E-56 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1679 fd4d950c37f3afeda6ace766e4137535 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.511 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1679 fd4d950c37f3afeda6ace766e4137535 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 4.0E-52 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1443 bcbeb981c2741834043f77054c494adc 194 Pfam PF04403 Paraquat-inducible protein A 39 192 9.7E-47 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like ABED_1870 08404c68b94c9ac8ffe594cdbbc1dcb4 223 Gene3D G3DSA:3.40.1280.10 71 223 7.8E-24 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABED_1870 08404c68b94c9ac8ffe594cdbbc1dcb4 223 SUPERFAMILY SSF75217 74 222 2.03E-26 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases ABED_1870 08404c68b94c9ac8ffe594cdbbc1dcb4 223 Gene3D G3DSA:2.40.240.20 2 69 3.7E-5 T 14-10-2018 ABED_1870 08404c68b94c9ac8ffe594cdbbc1dcb4 223 Pfam PF04452 RNA methyltransferase 15 221 1.8E-39 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABED_1870 08404c68b94c9ac8ffe594cdbbc1dcb4 223 PIRSF PIRSF015601 1 223 4.2E-38 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABED_1870 08404c68b94c9ac8ffe594cdbbc1dcb4 223 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 221 2.9E-40 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABED_0253 65b7be03b76b0d27fa6c6d71c81cf33d 402 SUPERFAMILY SSF141523 246 386 1.31E-16 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABED_0253 65b7be03b76b0d27fa6c6d71c81cf33d 402 Pfam PF03734 L,D-transpeptidase catalytic domain 251 387 1.1E-11 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABED_0253 65b7be03b76b0d27fa6c6d71c81cf33d 402 Gene3D G3DSA:2.40.440.10 169 389 6.5E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABED_0720 fd208c4d09805c28b4a14c22e2d40df9 72 Gene3D G3DSA:2.40.50.140 1 72 3.4E-35 T 14-10-2018 ABED_0720 fd208c4d09805c28b4a14c22e2d40df9 72 SMART SM00316 4 72 1.1E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_0720 fd208c4d09805c28b4a14c22e2d40df9 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 4.5E-34 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ABED_0720 fd208c4d09805c28b4a14c22e2d40df9 72 SUPERFAMILY SSF50249 2 72 3.56E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0720 fd208c4d09805c28b4a14c22e2d40df9 72 Pfam PF01176 Translation initiation factor 1A / IF-1 9 70 5.6E-28 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 ABED_0720 fd208c4d09805c28b4a14c22e2d40df9 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 24.787 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ABED_1861 ccd000243b54896b720cfbf6dd1919ba 114 Pfam PF01230 HIT domain 10 103 1.5E-25 T 14-10-2018 IPR001310 Histidine triad (HIT) protein ABED_1861 ccd000243b54896b720cfbf6dd1919ba 114 ProSitePatterns PS00892 HIT domain signature. 82 100 - T 14-10-2018 IPR019808 Histidine triad, conserved site ABED_1861 ccd000243b54896b720cfbf6dd1919ba 114 SUPERFAMILY SSF54197 2 102 2.94E-31 T 14-10-2018 IPR036265 HIT-like superfamily ABED_1861 ccd000243b54896b720cfbf6dd1919ba 114 Gene3D G3DSA:3.30.428.10 1 106 1.1E-35 T 14-10-2018 IPR036265 HIT-like superfamily ABED_1861 ccd000243b54896b720cfbf6dd1919ba 114 PRINTS PR00332 Histidine triad family signature 89 99 5.4E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein ABED_1861 ccd000243b54896b720cfbf6dd1919ba 114 PRINTS PR00332 Histidine triad family signature 24 42 5.4E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein ABED_1861 ccd000243b54896b720cfbf6dd1919ba 114 PRINTS PR00332 Histidine triad family signature 3 19 5.4E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein ABED_0564 806dd7875f3ac54b5932353e8b169827 394 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 204 223 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABED_0564 806dd7875f3ac54b5932353e8b169827 394 Gene3D G3DSA:3.90.1150.10 5 382 2.8E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0564 806dd7875f3ac54b5932353e8b169827 394 Pfam PF00266 Aminotransferase class-V 16 381 6.0E-117 T 14-10-2018 IPR000192 Aminotransferase class V domain ABED_0564 806dd7875f3ac54b5932353e8b169827 394 SUPERFAMILY SSF53383 2 390 8.25E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0564 806dd7875f3ac54b5932353e8b169827 394 Gene3D G3DSA:3.40.640.10 33 288 2.8E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0564 806dd7875f3ac54b5932353e8b169827 394 PIRSF PIRSF005572 12 394 1.2E-47 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 Gene3D G3DSA:1.10.3120.10 119 429 8.5E-78 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 PIRSF PIRSF003095 1 433 1.7E-104 T 14-10-2018 IPR005215 Trigger factor GO:0015031 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 SUPERFAMILY SSF54534 101 246 6.87E-30 T 14-10-2018 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 161 242 1.2E-15 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 Hamap MF_00303 Trigger factor [tig]. 1 433 18.936 T 14-10-2018 IPR005215 Trigger factor GO:0015031 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 SUPERFAMILY SSF109998 253 428 8.63E-32 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 SUPERFAMILY SSF102735 1 128 2.35E-24 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 Gene3D G3DSA:3.10.50.40 153 251 8.5E-78 T 14-10-2018 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 Gene3D G3DSA:3.30.70.1050 1 118 1.2E-20 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 TIGRFAM TIGR00115 tig: trigger factor 13 427 3.2E-110 T 14-10-2018 IPR005215 Trigger factor GO:0015031 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 146 2.6E-25 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ABED_1556 86afa268ee2ae2ba93b4197ddfb31884 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 269 428 2.8E-28 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 SUPERFAMILY SSF55874 237 377 9.17E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 Gene3D G3DSA:1.10.287.130 158 231 1.7E-8 T 14-10-2018 ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 SMART SM00387 276 382 1.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 2.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 2.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 327 2.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 2.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 SMART SM00388 171 232 0.0037 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 Gene3D G3DSA:3.30.565.10 233 380 4.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 376 3.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0854 775642e21246a5f88f706f9dc3eebceb 382 SUPERFAMILY SSF47384 158 229 6.47E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 34.061 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 5.0E-66 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-30 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 1.4E-30 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-30 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 Gene3D G3DSA:3.90.930.12 2 82 6.5E-22 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 SUPERFAMILY SSF56053 83 175 3.0E-34 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 Pfam PF00347 Ribosomal protein L6 11 82 1.5E-8 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 Pfam PF00347 Ribosomal protein L6 91 163 1.1E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 PIRSF PIRSF002162 1 176 1.1E-43 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 SUPERFAMILY SSF56053 2 82 2.88E-18 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0714 f74d631c9389ed7402adb7afc45cbebf 178 Gene3D G3DSA:3.90.930.12 83 178 7.3E-37 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1201 671ecb481366a016da24df455381d9ae 216 SUPERFAMILY SSF51735 3 132 1.05E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1201 671ecb481366a016da24df455381d9ae 216 SUPERFAMILY SSF116726 142 212 3.4E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABED_1201 671ecb481366a016da24df455381d9ae 216 Gene3D G3DSA:3.30.70.1450 137 212 9.0E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABED_1201 671ecb481366a016da24df455381d9ae 216 Pfam PF02254 TrkA-N domain 4 119 1.4E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABED_1201 671ecb481366a016da24df455381d9ae 216 Gene3D G3DSA:3.40.50.720 1 136 6.8E-32 T 14-10-2018 ABED_0009 c0bd599806e426da20dbf6da9415fcff 284 SUPERFAMILY SSF52540 12 227 4.48E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0009 c0bd599806e426da20dbf6da9415fcff 284 SMART SM00382 27 205 5.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0009 c0bd599806e426da20dbf6da9415fcff 284 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0009 c0bd599806e426da20dbf6da9415fcff 284 Gene3D G3DSA:3.40.50.300 15 233 2.8E-61 T 14-10-2018 ABED_0009 c0bd599806e426da20dbf6da9415fcff 284 Pfam PF00005 ABC transporter 20 155 2.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1780 e17a527604a51f20ecd8af05748667a6 178 Gene3D G3DSA:2.30.30.240 92 178 2.3E-13 T 14-10-2018 ABED_1780 e17a527604a51f20ecd8af05748667a6 178 SUPERFAMILY SSF50346 97 168 1.65E-10 T 14-10-2018 IPR011033 PRC-barrel-like superfamily ABED_1780 e17a527604a51f20ecd8af05748667a6 178 SUPERFAMILY SSF50447 7 85 7.06E-9 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_1780 e17a527604a51f20ecd8af05748667a6 178 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 174 18.131 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ABED_1780 e17a527604a51f20ecd8af05748667a6 178 Pfam PF01782 RimM N-terminal domain 9 84 4.6E-12 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 ABED_1780 e17a527604a51f20ecd8af05748667a6 178 Gene3D G3DSA:2.40.30.60 6 86 2.5E-9 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 ABED_1780 e17a527604a51f20ecd8af05748667a6 178 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 7 169 1.7E-32 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ABED_0777 05e19680b6a082f2988e0bf82887ddb9 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0777 05e19680b6a082f2988e0bf82887ddb9 107 Gene3D G3DSA:3.30.70.20 2 46 8.8E-7 T 14-10-2018 ABED_0777 05e19680b6a082f2988e0bf82887ddb9 107 Gene3D G3DSA:3.30.70.20 47 94 2.1E-6 T 14-10-2018 ABED_0777 05e19680b6a082f2988e0bf82887ddb9 107 Pfam PF12838 4Fe-4S dicluster domain 18 67 3.0E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0777 05e19680b6a082f2988e0bf82887ddb9 107 SUPERFAMILY SSF54862 10 87 5.23E-19 T 14-10-2018 ABED_1198 5635ad796b6d379bfb834c0682c9406c 375 Pfam PF04914 DltD protein 31 374 3.4E-69 T 14-10-2018 IPR006998 DltD ABED_0646 f4d4e23afeda064ae0abbdb3a54141a0 580 Gene3D G3DSA:3.90.25.30 424 549 2.3E-114 T 14-10-2018 ABED_0646 f4d4e23afeda064ae0abbdb3a54141a0 580 SUPERFAMILY SSF53335 115 312 5.65E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0646 f4d4e23afeda064ae0abbdb3a54141a0 580 SUPERFAMILY SSF51735 265 525 1.6E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0646 f4d4e23afeda064ae0abbdb3a54141a0 580 Gene3D G3DSA:3.40.50.720 125 248 3.7E-26 T 14-10-2018 ABED_0646 f4d4e23afeda064ae0abbdb3a54141a0 580 Gene3D G3DSA:3.40.50.720 264 548 2.3E-114 T 14-10-2018 ABED_0646 f4d4e23afeda064ae0abbdb3a54141a0 580 Pfam PF02719 Polysaccharide biosynthesis protein 267 540 6.0E-115 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABED_0393 29223943446826350f969e47bad17d4f 125 SUPERFAMILY SSF52172 4 121 1.85E-30 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0393 29223943446826350f969e47bad17d4f 125 Gene3D G3DSA:3.40.50.2300 2 125 4.4E-32 T 14-10-2018 ABED_0393 29223943446826350f969e47bad17d4f 125 Pfam PF00072 Response regulator receiver domain 7 116 3.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0393 29223943446826350f969e47bad17d4f 125 SMART SM00448 5 118 6.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0484 2c7b78ddd21e2409c90a65cae9b8e9c2 168 Gene3D G3DSA:3.90.950.20 3 163 3.7E-55 T 14-10-2018 IPR036653 CinA-like, C-terminal ABED_0484 2c7b78ddd21e2409c90a65cae9b8e9c2 168 Pfam PF02464 Competence-damaged protein 14 161 3.4E-54 T 14-10-2018 IPR008136 CinA, C-terminal ABED_0484 2c7b78ddd21e2409c90a65cae9b8e9c2 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 159 4.3E-49 T 14-10-2018 IPR008136 CinA, C-terminal ABED_0484 2c7b78ddd21e2409c90a65cae9b8e9c2 168 SUPERFAMILY SSF142433 13 163 3.66E-50 T 14-10-2018 IPR036653 CinA-like, C-terminal ABED_1585 9508fd84f0e16fe4763e0ef9a2391c5b 314 Pfam PF09375 Imelysin 49 277 1.0E-26 T 14-10-2018 IPR018976 Imelysin-like domain ABED_1585 9508fd84f0e16fe4763e0ef9a2391c5b 314 Gene3D G3DSA:1.20.1420.20 11 314 7.5E-12 T 14-10-2018 IPR038352 Imelysin-like domain superfamily ABED_0743 4cc5e0258d77507967c043aae96b67cf 352 Gene3D G3DSA:1.10.287.470 94 153 1.2E-86 T 14-10-2018 ABED_0743 4cc5e0258d77507967c043aae96b67cf 352 Gene3D G3DSA:2.40.50.100 59 190 1.2E-86 T 14-10-2018 ABED_0743 4cc5e0258d77507967c043aae96b67cf 352 Gene3D G3DSA:2.40.420.20 277 345 1.2E-86 T 14-10-2018 ABED_0743 4cc5e0258d77507967c043aae96b67cf 352 SUPERFAMILY SSF111369 51 270 3.27E-55 T 14-10-2018 ABED_0743 4cc5e0258d77507967c043aae96b67cf 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 263 1.4E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_0743 4cc5e0258d77507967c043aae96b67cf 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 347 5.1E-72 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABED_0743 4cc5e0258d77507967c043aae96b67cf 352 Gene3D G3DSA:2.40.30.170 47 276 1.2E-86 T 14-10-2018 ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 Gene3D G3DSA:1.10.10.10 2 73 3.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 SUPERFAMILY SSF46785 2 74 9.8E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 Pfam PF00155 Aminotransferase class I and II 122 330 1.0E-15 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 5.9E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 SUPERFAMILY SSF53383 92 449 1.57E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 7.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 7.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 SMART SM00345 14 72 9.9E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABED_0933 7a50486bdc3192c85adbef1b2524510b 454 Gene3D G3DSA:3.40.640.10 84 443 9.0E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 Pfam PF13840 ACT domain 336 397 4.9E-14 T 14-10-2018 IPR027795 CASTOR, ACT domain ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 SUPERFAMILY SSF55021 249 325 1.4E-16 T 14-10-2018 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 Pfam PF01842 ACT domain 269 327 7.3E-12 T 14-10-2018 IPR002912 ACT domain ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 Gene3D G3DSA:3.30.70.260 257 401 1.5E-52 T 14-10-2018 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 SUPERFAMILY SSF53633 3 244 7.07E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 399 2.1E-117 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 PIRSF PIRSF000726 54 403 1.3E-134 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 PIRSF PIRSF000726 1 65 2.9E-17 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 Pfam PF00696 Amino acid kinase family 1 225 7.2E-49 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 Gene3D G3DSA:3.40.1160.10 1 256 8.4E-83 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 Gene3D G3DSA:3.30.70.260 261 336 1.5E-52 T 14-10-2018 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 401 4.5E-131 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABED_1128 3c6157e3e91d6d4c458d892c65dbc503 403 SUPERFAMILY SSF55021 328 402 1.91E-22 T 14-10-2018 ABED_0915 0c4e5c97962194ca00f5f5006766ed73 208 Pfam PF00239 Resolvase, N terminal domain 5 146 1.7E-16 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABED_0915 0c4e5c97962194ca00f5f5006766ed73 208 SUPERFAMILY SSF53041 3 146 9.42E-17 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ABED_0915 0c4e5c97962194ca00f5f5006766ed73 208 SMART SM00857 4 147 1.4E-14 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABED_0915 0c4e5c97962194ca00f5f5006766ed73 208 Gene3D G3DSA:3.40.50.1390 2 157 3.3E-16 T 14-10-2018 ABED_1216 8617c9672fb46e5a9f5ec4e5d9f7796a 304 SUPERFAMILY SSF53335 84 283 1.59E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1216 8617c9672fb46e5a9f5ec4e5d9f7796a 304 Gene3D G3DSA:3.40.50.150 81 260 1.4E-23 T 14-10-2018 ABED_1216 8617c9672fb46e5a9f5ec4e5d9f7796a 304 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 9 300 6.9E-99 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 ABED_1216 8617c9672fb46e5a9f5ec4e5d9f7796a 304 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 1 302 48.732 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 ABED_1216 8617c9672fb46e5a9f5ec4e5d9f7796a 304 Pfam PF08003 Protein of unknown function (DUF1698) 11 302 3.2E-92 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 Gene3D G3DSA:3.30.470.130 1 451 6.4E-187 T 14-10-2018 ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 SMART SM00878 337 443 6.6E-60 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 SUPERFAMILY SSF52440 2 113 5.11E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 2.3E-79 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 111 7.8E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 3.1E-40 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 SUPERFAMILY SSF56059 84 348 6.89E-68 T 14-10-2018 ABED_0561 bbff9709a213bc11e36a69fb420eca19 483 SUPERFAMILY SSF51246 332 449 4.45E-42 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABED_1371 c2ae8e532c920eb2bdb6b605b1bb34e1 291 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 283 1.8E-94 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABED_1371 c2ae8e532c920eb2bdb6b605b1bb34e1 291 SMART SM00729 55 262 1.1E-12 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_1371 c2ae8e532c920eb2bdb6b605b1bb34e1 291 Hamap MF_00206 Lipoyl synthase [lipA]. 1 291 112.8 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABED_1371 c2ae8e532c920eb2bdb6b605b1bb34e1 291 Gene3D G3DSA:3.20.20.70 6 256 9.7E-19 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1371 c2ae8e532c920eb2bdb6b605b1bb34e1 291 Pfam PF04055 Radical SAM superfamily 62 221 6.1E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_1371 c2ae8e532c920eb2bdb6b605b1bb34e1 291 SUPERFAMILY SSF102114 24 282 1.22E-48 T 14-10-2018 ABED_1688 77a4d2af7bdd4669ddcf8caa813316a5 527 Pfam PF03929 PepSY-associated TM region 20 377 1.2E-31 T 14-10-2018 IPR005625 PepSY-associated TM protein ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 SUPERFAMILY SSF56925 35 176 9.94E-16 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 Pfam PF00691 OmpA family 235 330 9.1E-23 T 14-10-2018 IPR006665 OmpA-like domain ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 281 298 1.6E-7 T 14-10-2018 ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 299 318 1.6E-7 T 14-10-2018 ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 319 338 1.6E-7 T 14-10-2018 ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 SUPERFAMILY SSF103647 194 228 8.37E-7 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 SUPERFAMILY SSF103088 224 335 3.92E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 Gene3D G3DSA:2.40.160.20 14 174 2.2E-18 T 14-10-2018 ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 PRINTS PR01021 OMPA domain signature 281 297 2.0E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 PRINTS PR01021 OMPA domain signature 236 258 2.0E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 PRINTS PR01021 OMPA domain signature 266 281 2.0E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 Gene3D G3DSA:3.30.1330.60 209 338 4.7E-41 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0457 9c8e77577e50107546bf782551a5a8ff 338 Pfam PF13505 Outer membrane protein beta-barrel domain 5 162 1.4E-7 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel ABED_1094 0cd7eb9c1658f05c30ea034eb4c82a95 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABED_1094 0cd7eb9c1658f05c30ea034eb4c82a95 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 76 2.4E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABED_1094 0cd7eb9c1658f05c30ea034eb4c82a95 185 Gene3D G3DSA:1.20.120.1760 9 183 1.4E-14 T 14-10-2018 ABED_0778 8e8d288ca9e0389fdc6af0a03a6af835 376 SUPERFAMILY SSF52922 267 374 1.7E-24 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABED_0778 8e8d288ca9e0389fdc6af0a03a6af835 376 Gene3D G3DSA:3.40.50.970 1 191 3.1E-62 T 14-10-2018 ABED_0778 8e8d288ca9e0389fdc6af0a03a6af835 376 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 245 1.5E-58 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 ABED_0778 8e8d288ca9e0389fdc6af0a03a6af835 376 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 276 366 1.8E-21 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II ABED_0778 8e8d288ca9e0389fdc6af0a03a6af835 376 SUPERFAMILY SSF52518 6 260 2.06E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_0778 8e8d288ca9e0389fdc6af0a03a6af835 376 Gene3D G3DSA:3.40.50.920 266 376 1.9E-27 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABED_0086 97aa4267603539311785450d550cfbcf 576 SMART SM00267 388 523 8.8E-6 T 14-10-2018 IPR000160 GGDEF domain ABED_0086 97aa4267603539311785450d550cfbcf 576 Gene3D G3DSA:3.30.70.270 397 572 5.7E-20 T 14-10-2018 ABED_0086 97aa4267603539311785450d550cfbcf 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 402 514 9.7E-15 T 14-10-2018 IPR000160 GGDEF domain ABED_0086 97aa4267603539311785450d550cfbcf 576 SMART SM00052 1 238 2.1E-29 T 14-10-2018 IPR001633 EAL domain ABED_0086 97aa4267603539311785450d550cfbcf 576 Gene3D G3DSA:3.10.580.10 225 315 5.7E-5 T 14-10-2018 ABED_0086 97aa4267603539311785450d550cfbcf 576 Gene3D G3DSA:3.20.20.450 4 224 8.8E-50 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0086 97aa4267603539311785450d550cfbcf 576 SUPERFAMILY SSF55073 404 507 6.36E-18 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0086 97aa4267603539311785450d550cfbcf 576 Pfam PF00571 CBS domain 270 315 5.8E-4 T 14-10-2018 IPR000644 CBS domain ABED_0086 97aa4267603539311785450d550cfbcf 576 Pfam PF00563 EAL domain 10 233 2.5E-49 T 14-10-2018 IPR001633 EAL domain ABED_0086 97aa4267603539311785450d550cfbcf 576 SUPERFAMILY SSF141868 11 241 2.75E-57 T 14-10-2018 IPR035919 EAL domain superfamily ABED_0086 97aa4267603539311785450d550cfbcf 576 SUPERFAMILY SSF54631 265 387 3.54E-7 T 14-10-2018 ABED_0086 97aa4267603539311785450d550cfbcf 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 396 513 7.6E-15 T 14-10-2018 IPR000160 GGDEF domain ABED_1993 007dbfb00ef4711737ee8072560434e9 213 Gene3D G3DSA:3.10.620.30 18 209 4.6E-48 T 14-10-2018 ABED_1993 007dbfb00ef4711737ee8072560434e9 213 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 55 164 4.0E-14 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted ABED_1418 bb61a61b101b0a94c0ae0ab522b129c4 161 Pfam PF00959 Phage lysozyme 29 150 3.7E-8 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 ABED_1418 bb61a61b101b0a94c0ae0ab522b129c4 161 Gene3D G3DSA:1.10.530.40 10 161 2.8E-47 T 14-10-2018 ABED_1418 bb61a61b101b0a94c0ae0ab522b129c4 161 SUPERFAMILY SSF53955 9 159 2.0E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily ABED_1418 bb61a61b101b0a94c0ae0ab522b129c4 161 PRINTS PR00684 Phage T4 lysozyme signature 8 27 3.2E-11 T 14-10-2018 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 ABED_1418 bb61a61b101b0a94c0ae0ab522b129c4 161 PRINTS PR00684 Phage T4 lysozyme signature 97 116 3.2E-11 T 14-10-2018 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 ABED_1418 bb61a61b101b0a94c0ae0ab522b129c4 161 PRINTS PR00684 Phage T4 lysozyme signature 28 46 3.2E-11 T 14-10-2018 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 ABED_1418 bb61a61b101b0a94c0ae0ab522b129c4 161 PRINTS PR00684 Phage T4 lysozyme signature 120 139 3.2E-11 T 14-10-2018 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 ABED_1418 bb61a61b101b0a94c0ae0ab522b129c4 161 PRINTS PR00684 Phage T4 lysozyme signature 140 161 3.2E-11 T 14-10-2018 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 3 397 5.7E-159 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 213 228 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 2 398 42.275 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 17 355 7.2E-25 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 SUPERFAMILY SSF50621 241 397 2.3E-56 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 SUPERFAMILY SSF51419 13 269 1.26E-78 T 14-10-2018 IPR029066 PLP-binding barrel ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 44 62 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 24 267 5.9E-63 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 Gene3D G3DSA:3.20.20.10 21 262 1.4E-145 T 14-10-2018 IPR029066 PLP-binding barrel ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 355 368 6.7E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 6.7E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 44 62 6.7E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 257 276 6.7E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 76 6.7E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 151 160 2.5E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 365 387 2.5E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 62 79 2.5E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 285 303 2.5E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1931 b1e8eb67db3567de5f7a1022a3fb2fb8 402 Gene3D G3DSA:2.40.37.10 4 395 1.4E-145 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.1E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.1E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 29.979 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 Pfam PF01197 Ribosomal protein L31 1 64 2.6E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 SUPERFAMILY SSF143800 1 65 6.28E-26 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 4.1E-33 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0144 0a1c7e6fb53785407cf65733b0f17043 67 Gene3D G3DSA:2.30.170.50 1 67 2.1E-32 T 14-10-2018 ABED_2150 9c31c3cc5b56351ab8ccb118d6bf311d 396 Gene3D G3DSA:3.30.565.10 257 389 1.3E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_2150 9c31c3cc5b56351ab8ccb118d6bf311d 396 Pfam PF00672 HAMP domain 150 196 1.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABED_2150 9c31c3cc5b56351ab8ccb118d6bf311d 396 SUPERFAMILY SSF47384 184 255 9.61E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_2150 9c31c3cc5b56351ab8ccb118d6bf311d 396 SUPERFAMILY SSF158472 150 199 1.7E-11 T 14-10-2018 ABED_2150 9c31c3cc5b56351ab8ccb118d6bf311d 396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 379 1.4E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_2150 9c31c3cc5b56351ab8ccb118d6bf311d 396 Gene3D G3DSA:1.10.287.130 146 253 1.3E-21 T 14-10-2018 ABED_2150 9c31c3cc5b56351ab8ccb118d6bf311d 396 SMART SM00304 148 200 7.2E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABED_2150 9c31c3cc5b56351ab8ccb118d6bf311d 396 SUPERFAMILY SSF55874 276 387 3.8E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0397 00fdc879e6a08779bdffe128747d74f6 263 SUPERFAMILY SSF52540 2 208 7.94E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0397 00fdc879e6a08779bdffe128747d74f6 263 Gene3D G3DSA:3.40.50.300 1 221 4.5E-9 T 14-10-2018 ABED_1784 9044d573729b6e79b6252842e91820be 251 Gene3D G3DSA:3.30.2350.10 51 244 1.3E-44 T 14-10-2018 ABED_1784 9044d573729b6e79b6252842e91820be 251 Pfam PF00849 RNA pseudouridylate synthase 91 201 4.7E-23 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1784 9044d573729b6e79b6252842e91820be 251 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 93 107 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1784 9044d573729b6e79b6252842e91820be 251 SUPERFAMILY SSF55120 56 246 4.0E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 Gene3D G3DSA:3.60.20.10 15 544 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 SUPERFAMILY SSF69336 1216 1469 3.92E-80 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 Gene3D G3DSA:3.20.20.70 482 1180 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 Pfam PF04898 Glutamate synthase central domain 456 742 1.8E-92 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 Pfam PF01645 Conserved region in glutamate synthase 814 1165 7.3E-144 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 Pfam PF00310 Glutamine amidotransferases class-II 15 426 1.1E-145 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 SUPERFAMILY SSF56235 15 429 2.32E-125 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 Gene3D G3DSA:3.20.20.70 431 800 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 SUPERFAMILY SSF51395 443 1187 1.05E-227 T 14-10-2018 ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 Pfam PF01493 GXGXG motif 1241 1424 1.2E-71 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 ABED_1660 f3794137052dd6dd46c673fd6eb77307 1479 Gene3D G3DSA:2.160.20.60 1213 1475 3.9E-95 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 Pfam PF00271 Helicase conserved C-terminal domain 226 333 1.3E-25 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 Gene3D G3DSA:3.30.70.330 382 454 3.0E-22 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 Gene3D G3DSA:3.40.50.300 211 378 1.1E-42 T 14-10-2018 ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 SMART SM00487 20 216 8.9E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 SUPERFAMILY SSF52540 70 354 2.67E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 Pfam PF03880 DbpA RNA binding domain 382 448 5.3E-22 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 SMART SM00490 252 333 2.1E-27 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 Pfam PF00270 DEAD/DEAH box helicase 25 190 4.6E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABED_1434 72e64b5d442ef6b4e0b69d2f7740a643 454 Gene3D G3DSA:3.40.50.300 1 207 3.9E-73 T 14-10-2018 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 SUPERFAMILY SSF50129 1 84 8.91E-29 T 14-10-2018 IPR011032 GroES-like superfamily ABED_0406 670ae008770ab05d3b65903df6dff01e 85 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 Hamap MF_00580 10 kDa chaperonin [groS]. 2 85 19.775 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 Pfam PF00166 Chaperonin 10 Kd subunit 2 84 7.6E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 Gene3D G3DSA:2.30.33.40 1 85 9.3E-29 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 PRINTS PR00297 10kDa chaperonin signature 72 85 1.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 PRINTS PR00297 10kDa chaperonin signature 51 63 1.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 PRINTS PR00297 10kDa chaperonin signature 25 46 1.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 PRINTS PR00297 10kDa chaperonin signature 3 18 1.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABED_0406 670ae008770ab05d3b65903df6dff01e 85 SMART SM00883 2 85 1.8E-43 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABED_1615 1038e19c8aba090954b49e66f2bafc0b 308 Pfam PF04055 Radical SAM superfamily 31 189 4.1E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_1615 1038e19c8aba090954b49e66f2bafc0b 308 SUPERFAMILY SSF102114 31 233 2.88E-22 T 14-10-2018 ABED_1615 1038e19c8aba090954b49e66f2bafc0b 308 Gene3D G3DSA:3.20.20.70 21 258 4.9E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1615 1038e19c8aba090954b49e66f2bafc0b 308 Pfam PF13353 4Fe-4S single cluster domain 30 128 1.4E-6 T 14-10-2018 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 SUPERFAMILY SSF158472 551 598 9.29E-7 T 14-10-2018 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 Gene3D G3DSA:3.30.450.20 147 237 1.5E-5 T 14-10-2018 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 SUPERFAMILY SSF55874 701 855 6.02E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 Gene3D G3DSA:1.10.287.130 619 703 3.6E-14 T 14-10-2018 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 SMART SM00387 745 857 1.8E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 749 855 9.6E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 SUPERFAMILY SSF47384 629 702 3.53E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 835 2.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 854 2.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 786 800 2.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 814 2.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 Gene3D G3DSA:3.30.565.10 704 857 6.2E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 Gene3D G3DSA:1.20.1480.50 506 605 4.7E-10 T 14-10-2018 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 SMART SM00304 547 599 1.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABED_0430 19f69d54bb5d3d9a8eca6679d92c208d 857 SUPERFAMILY SSF103190 174 309 2.01E-15 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 SUPERFAMILY SSF63411 4 161 7.87E-64 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 PIRSF PIRSF006160 1 162 3.4E-64 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 1.3E-59 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 Gene3D G3DSA:3.30.1360.80 1 171 2.6E-67 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 154 5.0E-66 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 4.9E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 4.9E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 4.9E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 4.9E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 4.9E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0103 1ef5efaee10c8f6911362e6ba7572190 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 33.848 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABED_0494 c9fa11736124a2c7b4b8d60ad901dd48 598 Gene3D G3DSA:2.60.40.2380 31 164 8.3E-9 T 14-10-2018 ABED_0494 c9fa11736124a2c7b4b8d60ad901dd48 598 SUPERFAMILY SSF55874 491 560 5.5E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0494 c9fa11736124a2c7b4b8d60ad901dd48 598 Pfam PF07695 7TM diverse intracellular signalling 175 371 5.8E-24 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ABED_0494 c9fa11736124a2c7b4b8d60ad901dd48 598 Gene3D G3DSA:3.30.565.10 474 594 1.3E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0494 c9fa11736124a2c7b4b8d60ad901dd48 598 Pfam PF07696 7TMR-DISM extracellular 2 35 154 2.6E-18 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 ABED_0494 c9fa11736124a2c7b4b8d60ad901dd48 598 Pfam PF07568 Histidine kinase 416 487 6.2E-16 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain ABED_0638 92b5acf9449a2e62340b58db5ca17037 373 Gene3D G3DSA:3.40.50.2000 178 353 1.9E-21 T 14-10-2018 ABED_0638 92b5acf9449a2e62340b58db5ca17037 373 Gene3D G3DSA:3.40.50.2000 39 363 1.9E-21 T 14-10-2018 ABED_0638 92b5acf9449a2e62340b58db5ca17037 373 Pfam PF00534 Glycosyl transferases group 1 195 343 8.9E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 ABED_0638 92b5acf9449a2e62340b58db5ca17037 373 SUPERFAMILY SSF53756 3 371 6.8E-37 T 14-10-2018 ABED_0132 7eeb48779d30d674cefe21a7290d9a0d 342 SUPERFAMILY SSF55347 149 320 2.77E-30 T 14-10-2018 ABED_0132 7eeb48779d30d674cefe21a7290d9a0d 342 SMART SM00846 3 149 8.9E-28 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0132 7eeb48779d30d674cefe21a7290d9a0d 342 Gene3D G3DSA:3.30.360.10 148 327 6.8E-85 T 14-10-2018 ABED_0132 7eeb48779d30d674cefe21a7290d9a0d 342 Gene3D G3DSA:3.40.50.720 4 332 6.8E-85 T 14-10-2018 ABED_0132 7eeb48779d30d674cefe21a7290d9a0d 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 101 3.6E-19 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0132 7eeb48779d30d674cefe21a7290d9a0d 342 SUPERFAMILY SSF51735 3 167 6.3E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0132 7eeb48779d30d674cefe21a7290d9a0d 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 154 319 2.7E-23 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0132 7eeb48779d30d674cefe21a7290d9a0d 342 PIRSF PIRSF000149 1 341 5.4E-72 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0586 9a35634ccb650956c3cb935836a4a358 230 Gene3D G3DSA:1.10.10.10 136 229 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0586 9a35634ccb650956c3cb935836a4a358 230 SMART SM00448 11 122 9.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0586 9a35634ccb650956c3cb935836a4a358 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 225 4.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0586 9a35634ccb650956c3cb935836a4a358 230 Gene3D G3DSA:3.40.50.2300 7 135 7.7E-32 T 14-10-2018 ABED_0586 9a35634ccb650956c3cb935836a4a358 230 SMART SM00862 155 225 7.0E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0586 9a35634ccb650956c3cb935836a4a358 230 Pfam PF00072 Response regulator receiver domain 13 122 6.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0586 9a35634ccb650956c3cb935836a4a358 230 SUPERFAMILY SSF52172 9 176 1.35E-33 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0260 6264180173fe099f8d94d369d218849d 381 Pfam PF00285 Citrate synthase, C-terminal domain 15 363 1.4E-111 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0260 6264180173fe099f8d94d369d218849d 381 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 14 381 5.4E-152 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 ABED_0260 6264180173fe099f8d94d369d218849d 381 Gene3D G3DSA:1.10.230.10 230 328 1.1E-117 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ABED_0260 6264180173fe099f8d94d369d218849d 381 Gene3D G3DSA:1.10.580.10 35 361 1.1E-117 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABED_0260 6264180173fe099f8d94d369d218849d 381 SUPERFAMILY SSF48256 15 381 4.97E-118 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ABED_0260 6264180173fe099f8d94d369d218849d 381 PIRSF PIRSF001369 6 381 4.8E-109 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type ABED_0260 6264180173fe099f8d94d369d218849d 381 PRINTS PR00143 Citrate synthase signature 204 232 6.6E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0260 6264180173fe099f8d94d369d218849d 381 PRINTS PR00143 Citrate synthase signature 257 277 6.6E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0260 6264180173fe099f8d94d369d218849d 381 PRINTS PR00143 Citrate synthase signature 314 330 6.6E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0260 6264180173fe099f8d94d369d218849d 381 PRINTS PR00143 Citrate synthase signature 334 348 6.6E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0260 6264180173fe099f8d94d369d218849d 381 PRINTS PR00143 Citrate synthase signature 132 145 6.6E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0260 6264180173fe099f8d94d369d218849d 381 PRINTS PR00143 Citrate synthase signature 182 197 6.6E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0682 53ead4fd17701086299d54d2a527076d 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 5.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_0682 53ead4fd17701086299d54d2a527076d 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 5.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_0682 53ead4fd17701086299d54d2a527076d 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 5.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_0682 53ead4fd17701086299d54d2a527076d 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_0682 53ead4fd17701086299d54d2a527076d 367 Gene3D G3DSA:3.10.20.30 49 365 2.7E-145 T 14-10-2018 IPR012675 Beta-grasp domain superfamily ABED_0682 53ead4fd17701086299d54d2a527076d 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 42.366 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABED_0682 53ead4fd17701086299d54d2a527076d 367 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.1E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_0682 53ead4fd17701086299d54d2a527076d 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 1.2E-145 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABED_0682 53ead4fd17701086299d54d2a527076d 367 SUPERFAMILY SSF52540 4 305 4.07E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0682 53ead4fd17701086299d54d2a527076d 367 PIRSF PIRSF006641 1 367 3.3E-155 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABED_0682 53ead4fd17701086299d54d2a527076d 367 Gene3D G3DSA:1.10.150.300 114 202 2.7E-145 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 ABED_0682 53ead4fd17701086299d54d2a527076d 367 Gene3D G3DSA:3.40.50.300 5 282 2.7E-145 T 14-10-2018 ABED_0682 53ead4fd17701086299d54d2a527076d 367 SUPERFAMILY SSF81271 283 367 2.05E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABED_0682 53ead4fd17701086299d54d2a527076d 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 6.4E-41 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 PRINTS PR00625 DnaJ domain signature 230 250 9.8E-9 T 14-10-2018 IPR001623 DnaJ domain ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 PRINTS PR00625 DnaJ domain signature 206 221 9.8E-9 T 14-10-2018 IPR001623 DnaJ domain ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 PRINTS PR00625 DnaJ domain signature 188 206 9.8E-9 T 14-10-2018 IPR001623 DnaJ domain ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 SUPERFAMILY SSF46565 126 248 3.24E-14 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 Gene3D G3DSA:1.10.3680.10 25 179 7.0E-14 T 14-10-2018 IPR029024 TerB-like ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 Gene3D G3DSA:1.10.287.110 180 250 1.5E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 SMART SM00271 185 250 6.9E-12 T 14-10-2018 IPR001623 DnaJ domain ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 Pfam PF05099 Tellurite resistance protein TerB 48 162 2.9E-11 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal ABED_1169 e63ceecf572b2d6a9cc36a93461c26d0 251 Pfam PF00226 DnaJ domain 187 247 2.5E-11 T 14-10-2018 IPR001623 DnaJ domain ABED_1278 aace37871ace847d8724803a54cf3ae5 285 SUPERFAMILY SSF103481 180 279 6.41E-6 T 14-10-2018 ABED_1278 aace37871ace847d8724803a54cf3ae5 285 SUPERFAMILY SSF103481 40 136 1.57E-6 T 14-10-2018 ABED_1278 aace37871ace847d8724803a54cf3ae5 285 Pfam PF00892 EamA-like transporter family 6 133 5.0E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 Gene3D G3DSA:3.40.50.10490 245 599 4.8E-122 T 14-10-2018 ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 SUPERFAMILY SSF53697 242 600 4.45E-91 T 14-10-2018 ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 Pfam PF13522 Glutamine amidotransferase domain 67 194 2.6E-21 T 14-10-2018 ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 36.052 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 Gene3D G3DSA:3.60.20.10 2 237 6.6E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 Pfam PF01380 SIS domain 463 563 5.5E-13 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 Pfam PF01380 SIS domain 289 409 2.6E-29 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 SUPERFAMILY SSF56235 2 216 5.75E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 4.1E-229 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ABED_0419 2a139e87898ef1e2aeec5692b8626fa2 600 Gene3D G3DSA:3.40.50.10490 441 585 4.8E-122 T 14-10-2018 ABED_1576 b421aec60b4d8c5b687ca797a5f89e6f 466 SUPERFAMILY SSF46626 388 460 7.62E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1576 b421aec60b4d8c5b687ca797a5f89e6f 466 Gene3D G3DSA:1.10.760.10 388 463 3.8E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1576 b421aec60b4d8c5b687ca797a5f89e6f 466 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 390 456 8.3E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1853 0b6bdd55105fea5e95d8b1f72bfcc5c7 334 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 9 253 5.6E-63 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ABED_1853 0b6bdd55105fea5e95d8b1f72bfcc5c7 334 Gene3D G3DSA:3.40.430.10 170 292 2.5E-12 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABED_1853 0b6bdd55105fea5e95d8b1f72bfcc5c7 334 SUPERFAMILY SSF53927 5 172 2.82E-37 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABED_1853 0b6bdd55105fea5e95d8b1f72bfcc5c7 334 SUPERFAMILY SSF53597 175 331 3.92E-22 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABED_1853 0b6bdd55105fea5e95d8b1f72bfcc5c7 334 Gene3D G3DSA:3.40.140.10 1 169 2.1E-34 T 14-10-2018 ABED_1853 0b6bdd55105fea5e95d8b1f72bfcc5c7 334 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 127 3.7E-21 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 502 6.2E-27 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 SUPERFAMILY SSF110921 398 501 2.09E-17 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 SMART SM00917 371 503 5.1E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 Gene3D G3DSA:3.20.20.70 2 276 7.0E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 SUPERFAMILY SSF51569 3 291 1.28E-88 T 14-10-2018 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 Pfam PF00682 HMGL-like 5 273 2.5E-91 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 512 41.302 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 Gene3D G3DSA:1.10.238.260 281 398 3.9E-36 T 14-10-2018 ABED_0431 79a892923434a7a7bc4aa9ccf0b5b781 517 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 500 7.7E-200 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABED_1552 4843c57b77ffd115bee008a55fffad02 133 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 108 5.7E-10 T 14-10-2018 IPR000014 PAS domain ABED_1552 4843c57b77ffd115bee008a55fffad02 133 SUPERFAMILY SSF55785 14 103 3.14E-24 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1552 4843c57b77ffd115bee008a55fffad02 133 Gene3D G3DSA:3.30.450.20 7 133 2.1E-20 T 14-10-2018 ABED_1552 4843c57b77ffd115bee008a55fffad02 133 Pfam PF08447 PAS fold 25 103 8.7E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_1552 4843c57b77ffd115bee008a55fffad02 133 SMART SM00091 2 68 0.0072 T 14-10-2018 IPR000014 PAS domain ABED_1914 98f6b07c20d753205f9c8de4a08c0996 192 Pfam PF09976 Tetratricopeptide repeat-like domain 29 175 2.6E-8 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 ABED_0673 fdce65bdb94291627d88d5c173fa16dc 244 SUPERFAMILY SSF52172 11 174 5.12E-29 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0673 fdce65bdb94291627d88d5c173fa16dc 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 170 236 4.2E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0673 fdce65bdb94291627d88d5c173fa16dc 244 Gene3D G3DSA:3.40.50.2300 8 137 3.7E-26 T 14-10-2018 ABED_0673 fdce65bdb94291627d88d5c173fa16dc 244 Pfam PF00072 Response regulator receiver domain 13 124 1.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0673 fdce65bdb94291627d88d5c173fa16dc 244 SUPERFAMILY SSF46894 152 237 6.8E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_0673 fdce65bdb94291627d88d5c173fa16dc 244 SMART SM00862 167 237 6.5E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0673 fdce65bdb94291627d88d5c173fa16dc 244 SMART SM00448 11 123 4.3E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0673 fdce65bdb94291627d88d5c173fa16dc 244 Gene3D G3DSA:1.10.10.10 138 243 8.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1023 1f9c93693b61893995896d6d9250cfcd 203 Gene3D G3DSA:3.40.50.150 4 192 2.8E-33 T 14-10-2018 ABED_1023 1f9c93693b61893995896d6d9250cfcd 203 SUPERFAMILY SSF53335 4 202 8.14E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1023 1f9c93693b61893995896d6d9250cfcd 203 Pfam PF13649 Methyltransferase domain 40 133 6.5E-19 T 14-10-2018 ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 SUPERFAMILY SSF58104 341 720 2.75E-54 T 14-10-2018 ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 Gene3D G3DSA:1.10.287.950 420 720 1.2E-55 T 14-10-2018 ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 Pfam PF13682 Chemoreceptor zinc-binding domain 744 807 2.5E-8 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 SUPERFAMILY SSF103190 55 182 4.32E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 532 699 7.3E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 SMART SM00304 318 371 7.8E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 Gene3D G3DSA:1.20.1480.50 275 376 3.3E-8 T 14-10-2018 ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 Gene3D G3DSA:1.20.120.30 723 830 3.7E-5 T 14-10-2018 ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 SMART SM00283 472 719 6.7E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0500 46bd1ab5734fb335c7997df1a8de6e5d 848 Pfam PF14827 Double sensory domain of two-component sensor kinase 53 282 3.1E-23 T 14-10-2018 IPR029150 Double Cache domain 3 ABED_0433 528baf64140265485345878b9aba3388 139 Pfam PF14376 Haem-binding domain 11 135 6.5E-40 T 14-10-2018 IPR025992 Haem-binding domain ABED_0433 528baf64140265485345878b9aba3388 139 SMART SM01235 9 139 1.1E-57 T 14-10-2018 IPR025992 Haem-binding domain ABED_0686 47bb9f429a8d884b9c1e571117358466 104 Pfam PF06865 Protein of unknown function (DUF1255) 12 101 6.5E-32 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 ABED_0686 47bb9f429a8d884b9c1e571117358466 104 SUPERFAMILY SSF51182 11 102 2.85E-26 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_0686 47bb9f429a8d884b9c1e571117358466 104 Gene3D G3DSA:2.60.120.10 1 101 8.9E-37 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0686 47bb9f429a8d884b9c1e571117358466 104 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 102 24.062 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 ABED_0124 34d81c914b5e2ad854a7b3a88aa38013 281 Gene3D G3DSA:3.30.930.10 3 281 8.6E-32 T 14-10-2018 ABED_0124 34d81c914b5e2ad854a7b3a88aa38013 281 SUPERFAMILY SSF55681 5 279 8.82E-29 T 14-10-2018 ABED_0124 34d81c914b5e2ad854a7b3a88aa38013 281 Pfam PF13393 Histidyl-tRNA synthetase 19 273 6.0E-19 T 14-10-2018 ABED_0285 e1c781f12a7c6ca361e8f1ff1c4f3100 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 5.5E-5 T 14-10-2018 ABED_0285 e1c781f12a7c6ca361e8f1ff1c4f3100 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 102 122 5.5E-5 T 14-10-2018 ABED_0285 e1c781f12a7c6ca361e8f1ff1c4f3100 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 422 441 5.5E-5 T 14-10-2018 ABED_0285 e1c781f12a7c6ca361e8f1ff1c4f3100 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 217 238 5.5E-5 T 14-10-2018 ABED_0285 e1c781f12a7c6ca361e8f1ff1c4f3100 506 Pfam PF00361 Proton-conducting membrane transporter 125 426 2.9E-54 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0285 e1c781f12a7c6ca361e8f1ff1c4f3100 506 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 5 481 4.2E-106 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ABED_0285 e1c781f12a7c6ca361e8f1ff1c4f3100 506 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 2 482 16.501 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 SUPERFAMILY SSF51735 1 146 2.16E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 Gene3D G3DSA:1.10.3730.10 152 251 5.0E-29 T 14-10-2018 ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 149 250 5.4E-32 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 251 23.297 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 251 9.7E-66 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 PIRSF PIRSF000193 1 254 1.8E-61 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 90 9.6E-9 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 SUPERFAMILY SSF48179 149 253 4.42E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABED_0545 f3a8098ecc49d6a2bab61fe22204369d 254 Gene3D G3DSA:3.40.50.720 1 151 9.7E-27 T 14-10-2018 ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 ProSitePatterns PS00213 Lipocalin signature. 35 46 - T 14-10-2018 IPR022272 Lipocalin family conserved site ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 PIRSF PIRSF036893 1 174 2.4E-54 T 14-10-2018 IPR022271 Lipocalin, ApoD type ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 Pfam PF08212 Lipocalin-like domain 34 171 9.8E-48 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 SUPERFAMILY SSF50814 10 173 9.35E-49 T 14-10-2018 IPR012674 Calycin ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 PRINTS PR01171 Bacterial lipocalin signature 103 117 5.0E-24 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 PRINTS PR01171 Bacterial lipocalin signature 120 128 5.0E-24 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 PRINTS PR01171 Bacterial lipocalin signature 162 172 5.0E-24 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 PRINTS PR01171 Bacterial lipocalin signature 51 67 5.0E-24 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 PRINTS PR01171 Bacterial lipocalin signature 135 146 5.0E-24 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 PRINTS PR01171 Bacterial lipocalin signature 34 48 5.0E-24 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ABED_0753 cde73f8a8d00262b7f5e81179b5b18c6 174 Gene3D G3DSA:2.40.128.20 12 174 1.1E-56 T 14-10-2018 IPR012674 Calycin ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 1.3E-34 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.3E-34 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-34 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.3E-34 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 1.3E-34 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 Gene3D G3DSA:3.50.50.60 154 275 6.0E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.6E-65 T 14-10-2018 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 PIRSF PIRSF000350 1 471 2.2E-84 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 457 3.4E-32 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 SUPERFAMILY SSF51905 6 382 2.4E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 SUPERFAMILY SSF55424 346 468 5.67E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 460 1.7E-141 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 329 1.6E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 Gene3D G3DSA:3.50.50.60 8 334 6.0E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1375 3b0d720b9402d1019a5ea1ce94041577 477 Gene3D G3DSA:3.30.390.30 348 469 9.2E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 SMART SM00267 150 327 6.3E-42 T 14-10-2018 IPR000160 GGDEF domain ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 SUPERFAMILY SSF55785 31 146 6.81E-14 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 146 8.2E-6 T 14-10-2018 IPR000014 PAS domain ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 Gene3D G3DSA:3.30.70.270 148 328 5.5E-46 T 14-10-2018 ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 SUPERFAMILY SSF55073 166 326 3.14E-37 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 327 6.5E-44 T 14-10-2018 IPR000160 GGDEF domain ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 Gene3D G3DSA:3.30.450.20 14 147 2.6E-12 T 14-10-2018 ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 Pfam PF08448 PAS fold 33 142 2.5E-8 T 14-10-2018 IPR013656 PAS fold-4 ABED_1345 4bac9b5da6f44080d755035ba7ac0b33 331 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 323 3.6E-39 T 14-10-2018 IPR000160 GGDEF domain ABED_0968 987dfa7e4d477c97b79b1a3bdb95de8e 452 Pfam PF01425 Amidase 47 437 1.7E-144 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABED_0968 987dfa7e4d477c97b79b1a3bdb95de8e 452 SUPERFAMILY SSF75304 48 448 4.97E-134 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABED_0968 987dfa7e4d477c97b79b1a3bdb95de8e 452 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 2 448 2.8E-172 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABED_0968 987dfa7e4d477c97b79b1a3bdb95de8e 452 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 17 449 80.495 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABED_0968 987dfa7e4d477c97b79b1a3bdb95de8e 452 ProSitePatterns PS00571 Amidases signature. 127 158 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 ABED_0968 987dfa7e4d477c97b79b1a3bdb95de8e 452 Gene3D G3DSA:3.90.1300.10 1 452 3.9E-161 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 PIRSF PIRSF005419 2 703 4.8E-212 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 Gene3D G3DSA:1.10.490.80 602 700 3.1E-7 T 14-10-2018 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 3.0E-48 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 3.0E-48 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 3.0E-48 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 66 85 3.0E-48 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 29 42 3.0E-48 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 3.0E-48 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 11 700 7.6E-237 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 Gene3D G3DSA:3.40.30.60 371 511 2.4E-42 T 14-10-2018 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 Gene3D G3DSA:1.10.8.540 512 600 5.8E-19 T 14-10-2018 ABED_1747 4f5ef35fc0bcc3f2230843c28c7e2a63 703 Pfam PF00771 FHIPEP family 23 693 1.4E-226 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABED_0640 495c21b494bfc744b4018e0aa57b0ae6 373 Gene3D G3DSA:3.40.50.2000 4 185 1.6E-107 T 14-10-2018 ABED_0640 495c21b494bfc744b4018e0aa57b0ae6 373 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 359 6.3E-73 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABED_0640 495c21b494bfc744b4018e0aa57b0ae6 373 SUPERFAMILY SSF53756 1 370 4.52E-109 T 14-10-2018 ABED_0640 495c21b494bfc744b4018e0aa57b0ae6 373 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 358 5.1E-90 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABED_0640 495c21b494bfc744b4018e0aa57b0ae6 373 Gene3D G3DSA:3.40.50.2000 186 327 1.6E-107 T 14-10-2018 ABED_1623 e6afb64152a9b2392a4225b64579a83e 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 20.637 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1623 e6afb64152a9b2392a4225b64579a83e 62 Pfam PF00830 Ribosomal L28 family 3 60 5.4E-23 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1623 e6afb64152a9b2392a4225b64579a83e 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 5.0E-25 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1623 e6afb64152a9b2392a4225b64579a83e 62 SUPERFAMILY SSF143800 1 60 2.55E-24 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1623 e6afb64152a9b2392a4225b64579a83e 62 Gene3D G3DSA:2.30.170.40 2 62 1.3E-21 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1832 c37faf5522bb088c856929f92c1d7144 118 PIRSF PIRSF002191 1 118 7.3E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1832 c37faf5522bb088c856929f92c1d7144 118 PRINTS PR00061 Ribosomal protein L19 signature 36 65 3.0E-34 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1832 c37faf5522bb088c856929f92c1d7144 118 PRINTS PR00061 Ribosomal protein L19 signature 6 35 3.0E-34 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1832 c37faf5522bb088c856929f92c1d7144 118 PRINTS PR00061 Ribosomal protein L19 signature 91 116 3.0E-34 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1832 c37faf5522bb088c856929f92c1d7144 118 SUPERFAMILY SSF50104 3 116 1.2E-37 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABED_1832 c37faf5522bb088c856929f92c1d7144 118 Pfam PF01245 Ribosomal protein L19 6 115 5.4E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1832 c37faf5522bb088c856929f92c1d7144 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 28.925 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1832 c37faf5522bb088c856929f92c1d7144 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 2.5E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1832 c37faf5522bb088c856929f92c1d7144 118 Gene3D G3DSA:2.30.30.790 8 118 1.7E-12 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1979 936de9dcb551ca2e3c7db4edc807c966 355 Hamap MF_01086 UPF0284 protein . 1 355 97.045 T 14-10-2018 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative ABED_1979 936de9dcb551ca2e3c7db4edc807c966 355 Gene3D G3DSA:3.40.50.10210 14 355 1.9E-93 T 14-10-2018 ABED_1979 936de9dcb551ca2e3c7db4edc807c966 355 TIGRFAM TIGR00303 TIGR00303: TIGR00303 family protein 14 350 6.9E-73 T 14-10-2018 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative ABED_1979 936de9dcb551ca2e3c7db4edc807c966 355 SUPERFAMILY SSF52733 47 345 1.16E-33 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 ABED_1578 dcbe655368660a85e2d53cb6b31220b4 190 Pfam PF00583 Acetyltransferase (GNAT) family 56 170 3.7E-14 T 14-10-2018 IPR000182 GNAT domain ABED_1578 dcbe655368660a85e2d53cb6b31220b4 190 Gene3D G3DSA:3.40.630.30 6 190 1.5E-42 T 14-10-2018 ABED_1578 dcbe655368660a85e2d53cb6b31220b4 190 SUPERFAMILY SSF55729 5 177 1.89E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0336 ca7e082c96165afee725e184f85a83aa 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 1.6E-118 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ABED_0336 ca7e082c96165afee725e184f85a83aa 426 PIRSF PIRSF006066 1 426 2.8E-169 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 ABED_0336 ca7e082c96165afee725e184f85a83aa 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 2.6E-151 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 ABED_1648 10a8602d0c522a7d6c543c8151578f73 345 Gene3D G3DSA:3.40.50.720 9 332 1.8E-125 T 14-10-2018 ABED_1648 10a8602d0c522a7d6c543c8151578f73 345 Gene3D G3DSA:3.90.25.10 212 339 1.8E-125 T 14-10-2018 ABED_1648 10a8602d0c522a7d6c543c8151578f73 345 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 332 1.2E-92 T 14-10-2018 IPR016040 NAD(P)-binding domain ABED_1648 10a8602d0c522a7d6c543c8151578f73 345 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 9 340 3.8E-141 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 ABED_1648 10a8602d0c522a7d6c543c8151578f73 345 SUPERFAMILY SSF51735 3 342 2.12E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_2139 2d5abf5150f37a09e221432e0e371cb8 159 SUPERFAMILY SSF88659 73 151 1.87E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_2139 2d5abf5150f37a09e221432e0e371cb8 159 Pfam PF08281 Sigma-70, region 4 97 143 1.0E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_2139 2d5abf5150f37a09e221432e0e371cb8 159 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 151 2.4E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABED_2139 2d5abf5150f37a09e221432e0e371cb8 159 Gene3D G3DSA:1.10.10.10 75 156 3.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_2139 2d5abf5150f37a09e221432e0e371cb8 159 Gene3D G3DSA:1.10.1740.10 1 62 1.2E-8 T 14-10-2018 ABED_2139 2d5abf5150f37a09e221432e0e371cb8 159 SUPERFAMILY SSF88946 3 79 3.73E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABED_2139 2d5abf5150f37a09e221432e0e371cb8 159 Pfam PF04542 Sigma-70 region 2 4 65 4.9E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1047 b3730ba9998407f934b07d4cc8161463 233 SUPERFAMILY SSF52540 9 216 2.72E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1047 b3730ba9998407f934b07d4cc8161463 233 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_1047 b3730ba9998407f934b07d4cc8161463 233 Pfam PF00005 ABC transporter 12 151 1.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1047 b3730ba9998407f934b07d4cc8161463 233 Gene3D G3DSA:3.40.50.300 1 231 2.9E-41 T 14-10-2018 ABED_1047 b3730ba9998407f934b07d4cc8161463 233 SMART SM00382 21 198 8.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0145 0abc02d67f3e814f06163d3e29439b5e 273 Gene3D G3DSA:3.40.1010.10 1 115 3.1E-35 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ABED_0145 0abc02d67f3e814f06163d3e29439b5e 273 Gene3D G3DSA:3.30.950.10 116 228 1.1E-32 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ABED_0145 0abc02d67f3e814f06163d3e29439b5e 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 204 8.6E-27 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ABED_0145 0abc02d67f3e814f06163d3e29439b5e 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 ABED_0145 0abc02d67f3e814f06163d3e29439b5e 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 225 32.417 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABED_0145 0abc02d67f3e814f06163d3e29439b5e 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 268 3.0E-80 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABED_0145 0abc02d67f3e814f06163d3e29439b5e 273 SUPERFAMILY SSF53790 1 223 1.44E-66 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ABED_0145 0abc02d67f3e814f06163d3e29439b5e 273 PIRSF PIRSF005917 1 273 4.8E-85 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABED_1021 b9bb0ce26916c03871ebf582ae3d30db 481 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 477 2.2E-95 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 ABED_1021 b9bb0ce26916c03871ebf582ae3d30db 481 SUPERFAMILY SSF109604 21 477 1.07E-54 T 14-10-2018 ABED_1021 b9bb0ce26916c03871ebf582ae3d30db 481 Pfam PF01966 HD domain 58 150 1.7E-6 T 14-10-2018 IPR006674 HD domain ABED_1021 b9bb0ce26916c03871ebf582ae3d30db 481 Gene3D G3DSA:1.10.3210.10 1 234 6.5E-48 T 14-10-2018 ABED_1021 b9bb0ce26916c03871ebf582ae3d30db 481 Pfam PF13286 Phosphohydrolase-associated domain 434 475 6.9E-6 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain ABED_1021 b9bb0ce26916c03871ebf582ae3d30db 481 Gene3D G3DSA:1.10.3410.10 237 367 5.8E-21 T 14-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 ABED_1021 b9bb0ce26916c03871ebf582ae3d30db 481 SMART SM00471 54 259 4.4E-7 T 14-10-2018 IPR003607 HD/PDEase domain ABED_1620 3e4baa8451f596026334bd086dd1a85e 71 Gene3D G3DSA:1.20.58.660 1 71 3.9E-28 T 14-10-2018 ABED_1620 3e4baa8451f596026334bd086dd1a85e 71 Pfam PF04325 Protein of unknown function (DUF465) 19 63 1.1E-14 T 14-10-2018 IPR007420 Protein of unknown function DUF465 ABED_1874 f59841adb3a9339c0626391ea45330c2 493 Gene3D G3DSA:3.40.50.1100 101 450 3.5E-115 T 14-10-2018 ABED_1874 f59841adb3a9339c0626391ea45330c2 493 Gene3D G3DSA:3.90.1380.10 1 90 8.4E-12 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily ABED_1874 f59841adb3a9339c0626391ea45330c2 493 TIGRFAM TIGR00260 thrC: threonine synthase 68 442 6.1E-83 T 14-10-2018 IPR004450 Threonine synthase-like ABED_1874 f59841adb3a9339c0626391ea45330c2 493 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 411 8.8E-9 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABED_1874 f59841adb3a9339c0626391ea45330c2 493 SUPERFAMILY SSF53686 4 478 1.44E-126 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABED_1874 f59841adb3a9339c0626391ea45330c2 493 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 105 119 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABED_1874 f59841adb3a9339c0626391ea45330c2 493 Pfam PF14821 Threonine synthase N terminus 3 78 2.0E-12 T 14-10-2018 IPR029144 Threonine synthase, N-terminal ABED_1874 f59841adb3a9339c0626391ea45330c2 493 Gene3D G3DSA:3.40.50.1100 111 231 3.5E-115 T 14-10-2018 ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 Gene3D G3DSA:1.10.3710.10 320 394 9.8E-11 T 14-10-2018 ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 124 1.1E-20 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 Pfam PF16193 AAA C-terminal domain 167 238 1.3E-11 T 14-10-2018 IPR032423 AAA C-terminal domain ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 SUPERFAMILY SSF52540 2 211 4.75E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 Gene3D G3DSA:3.40.50.300 2 148 7.6E-40 T 14-10-2018 ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 SMART SM00382 37 150 3.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 Gene3D G3DSA:1.10.8.60 150 211 2.8E-5 T 14-10-2018 ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 Gene3D G3DSA:1.20.272.10 219 318 1.5E-40 T 14-10-2018 ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 Pfam PF12002 MgsA AAA+ ATPase C terminal 239 391 7.9E-53 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal ABED_0049 75002b3d456b1dc83fea2821066c9f22 394 SUPERFAMILY SSF48019 224 392 7.94E-58 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ABED_0270 449e90d6de9425db303551caf6a21068 450 PIRSF PIRSF000185 19 450 2.7E-110 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ABED_0270 449e90d6de9425db303551caf6a21068 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 1.0E-27 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABED_0270 449e90d6de9425db303551caf6a21068 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 1.0E-27 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABED_0270 449e90d6de9425db303551caf6a21068 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 1.0E-27 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABED_0270 449e90d6de9425db303551caf6a21068 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 1.0E-27 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABED_0270 449e90d6de9425db303551caf6a21068 450 Gene3D G3DSA:1.10.285.10 3 385 7.6E-164 T 14-10-2018 ABED_0270 449e90d6de9425db303551caf6a21068 450 SMART SM00839 201 448 4.2E-82 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABED_0270 449e90d6de9425db303551caf6a21068 450 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABED_0270 449e90d6de9425db303551caf6a21068 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 448 3.3E-85 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABED_0270 449e90d6de9425db303551caf6a21068 450 SUPERFAMILY SSF51735 199 449 1.32E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0270 449e90d6de9425db303551caf6a21068 450 SUPERFAMILY SSF53223 2 193 5.76E-70 T 14-10-2018 ABED_0270 449e90d6de9425db303551caf6a21068 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 2.0E-48 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABED_0270 449e90d6de9425db303551caf6a21068 450 Gene3D G3DSA:1.10.285.10 386 450 1.6E-10 T 14-10-2018 ABED_0270 449e90d6de9425db303551caf6a21068 450 Gene3D G3DSA:3.40.50.10860 52 187 7.6E-164 T 14-10-2018 ABED_0270 449e90d6de9425db303551caf6a21068 450 Gene3D G3DSA:3.40.50.720 206 375 7.6E-164 T 14-10-2018 ABED_1708 e635794b56f4074fba801cf4e3bf99b5 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 138 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1708 e635794b56f4074fba801cf4e3bf99b5 232 PIRSF PIRSF002155 1 225 7.2E-76 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1708 e635794b56f4074fba801cf4e3bf99b5 232 Gene3D G3DSA:3.30.190.20 20 223 4.4E-79 T 14-10-2018 ABED_1708 e635794b56f4074fba801cf4e3bf99b5 232 Pfam PF00687 Ribosomal protein L1p/L10e family 33 219 1.5E-53 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ABED_1708 e635794b56f4074fba801cf4e3bf99b5 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 228 41.399 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ABED_1708 e635794b56f4074fba801cf4e3bf99b5 232 Gene3D G3DSA:3.40.50.790 67 158 4.4E-79 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ABED_1708 e635794b56f4074fba801cf4e3bf99b5 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 3.8E-99 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ABED_1708 e635794b56f4074fba801cf4e3bf99b5 232 SUPERFAMILY SSF56808 6 224 4.71E-78 T 14-10-2018 IPR023674 Ribosomal protein L1-like ABED_1125 3e358ca06eeecacd497d4e85870a4262 277 Gene3D G3DSA:3.40.50.150 79 275 4.7E-53 T 14-10-2018 ABED_1125 3e358ca06eeecacd497d4e85870a4262 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 268 5.6E-66 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ABED_1125 3e358ca06eeecacd497d4e85870a4262 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 273 4.4E-66 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ABED_1125 3e358ca06eeecacd497d4e85870a4262 277 Gene3D G3DSA:1.10.8.10 1 78 5.0E-12 T 14-10-2018 ABED_1125 3e358ca06eeecacd497d4e85870a4262 277 SUPERFAMILY SSF53335 1 252 9.71E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1125 3e358ca06eeecacd497d4e85870a4262 277 Pfam PF05175 Methyltransferase small domain 105 190 2.2E-15 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABED_0196 34c6942c85712ef8a02de213de1b16a6 118 PIRSF PIRSF039090 1 116 1.4E-25 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ABED_0196 34c6942c85712ef8a02de213de1b16a6 118 Gene3D G3DSA:1.20.120.340 1 116 1.9E-29 T 14-10-2018 ABED_0196 34c6942c85712ef8a02de213de1b16a6 118 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 114 8.7E-27 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ABED_0196 34c6942c85712ef8a02de213de1b16a6 118 SUPERFAMILY SSF101116 5 114 2.75E-29 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 ABED_0196 34c6942c85712ef8a02de213de1b16a6 118 Pfam PF02561 Flagellar protein FliS 4 113 1.6E-28 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ABED_1379 781e75bb757a51652476f81161340ac9 253 ProSitePatterns PS00337 Beta-lactamase class-D active site. 61 71 - T 14-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 ABED_1379 781e75bb757a51652476f81161340ac9 253 SUPERFAMILY SSF56601 23 232 7.57E-34 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABED_1379 781e75bb757a51652476f81161340ac9 253 Gene3D G3DSA:3.40.710.10 7 253 3.8E-86 T 14-10-2018 ABED_1379 781e75bb757a51652476f81161340ac9 253 Pfam PF00905 Penicillin binding protein transpeptidase domain 49 241 1.1E-34 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABED_0737 8f52a9846d2b1f30c2fe1167051c0285 667 SUPERFAMILY SSF58104 385 611 1.29E-50 T 14-10-2018 ABED_0737 8f52a9846d2b1f30c2fe1167051c0285 667 Gene3D G3DSA:1.10.287.950 316 609 4.8E-58 T 14-10-2018 ABED_0737 8f52a9846d2b1f30c2fe1167051c0285 667 SMART SM00283 365 612 2.4E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0737 8f52a9846d2b1f30c2fe1167051c0285 667 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 160 2.8E-13 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABED_0737 8f52a9846d2b1f30c2fe1167051c0285 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 424 578 2.0E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1718 e564d17540569f1efcf7f8f0e0226c9d 659 Pfam PF00912 Transglycosylase 52 225 2.2E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1718 e564d17540569f1efcf7f8f0e0226c9d 659 SUPERFAMILY SSF56601 207 628 1.23E-105 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABED_1718 e564d17540569f1efcf7f8f0e0226c9d 659 Gene3D G3DSA:1.10.3810.10 43 242 2.7E-73 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1718 e564d17540569f1efcf7f8f0e0226c9d 659 Pfam PF00905 Penicillin binding protein transpeptidase domain 330 596 3.1E-31 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABED_1718 e564d17540569f1efcf7f8f0e0226c9d 659 SUPERFAMILY SSF53955 37 250 2.25E-72 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily ABED_1718 e564d17540569f1efcf7f8f0e0226c9d 659 Gene3D G3DSA:3.40.710.10 244 653 5.9E-104 T 14-10-2018 ABED_1718 e564d17540569f1efcf7f8f0e0226c9d 659 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 61 603 2.0E-179 T 14-10-2018 ABED_1846 e6ece945c4052360b8b5a83be1b65ade 301 Gene3D G3DSA:3.30.1700.10 125 299 4.5E-56 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABED_1846 e6ece945c4052360b8b5a83be1b65ade 301 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 291 7.6E-111 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABED_1846 e6ece945c4052360b8b5a83be1b65ade 301 Gene3D G3DSA:3.30.230.20 1 124 6.4E-41 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABED_1846 e6ece945c4052360b8b5a83be1b65ade 301 SUPERFAMILY SSF54211 136 273 2.96E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1846 e6ece945c4052360b8b5a83be1b65ade 301 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 1 275 41.502 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABED_1846 e6ece945c4052360b8b5a83be1b65ade 301 SUPERFAMILY SSF54211 1 120 3.94E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1846 e6ece945c4052360b8b5a83be1b65ade 301 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 271 2.6E-97 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ABED_0374 b1762269e1c45775bfa459e4311f27a7 251 SUPERFAMILY SSF103088 114 222 4.45E-14 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0374 b1762269e1c45775bfa459e4311f27a7 251 Pfam PF00691 OmpA family 126 217 1.2E-11 T 14-10-2018 IPR006665 OmpA-like domain ABED_0374 b1762269e1c45775bfa459e4311f27a7 251 Gene3D G3DSA:3.30.1330.60 94 238 3.0E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0374 b1762269e1c45775bfa459e4311f27a7 251 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 53 1.7E-14 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain ABED_0053 6d8a5c3d99363f5649868b34d3773a03 265 Gene3D G3DSA:1.10.8.100 196 262 1.5E-8 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 ABED_0053 6d8a5c3d99363f5649868b34d3773a03 265 Gene3D G3DSA:3.40.50.150 1 195 1.2E-53 T 14-10-2018 ABED_0053 6d8a5c3d99363f5649868b34d3773a03 265 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 35 61 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 ABED_0053 6d8a5c3d99363f5649868b34d3773a03 265 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 4 260 46.597 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ABED_0053 6d8a5c3d99363f5649868b34d3773a03 265 SMART SM00650 20 193 6.0E-49 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 ABED_0053 6d8a5c3d99363f5649868b34d3773a03 265 SUPERFAMILY SSF53335 3 256 4.67E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0053 6d8a5c3d99363f5649868b34d3773a03 265 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 257 7.1E-66 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ABED_0053 6d8a5c3d99363f5649868b34d3773a03 265 Pfam PF00398 Ribosomal RNA adenine dimethylase 5 256 1.2E-47 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 241 5.1E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 Gene3D G3DSA:2.170.130.10 115 248 7.7E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 SUPERFAMILY SSF56935 101 797 1.83E-119 T 14-10-2018 ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 Gene3D G3DSA:2.40.170.20 249 797 1.2E-153 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 Gene3D G3DSA:3.55.50.30 18 114 7.5E-7 T 14-10-2018 ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 139 797 2.7E-94 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 Pfam PF00593 TonB dependent receptor 318 796 1.7E-37 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 Pfam PF07660 Secretin and TonB N terminus short domain 50 95 4.9E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABED_1377 67f9dbe484a5962accb8f724fe3bce0a 797 SMART SM00965 45 95 2.7E-4 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 ProSitePatterns PS00818 Dps protein family signature 1. 26 42 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 Pfam PF00210 Ferritin-like domain 5 144 7.0E-22 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 26 42 6.8E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 6.8E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 6.8E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 PIRSF PIRSF005900 1 145 6.2E-41 T 14-10-2018 IPR002177 DNA-binding protein Dps ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 SUPERFAMILY SSF47240 3 143 1.15E-34 T 14-10-2018 IPR009078 Ferritin-like superfamily ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 Gene3D G3DSA:1.20.1260.10 1 145 3.1E-43 T 14-10-2018 IPR012347 Ferritin-like ABED_1949 70151d3d9b7cc0084db16ca0ffda11ca 145 ProSitePatterns PS00819 Dps protein family signature 2. 52 66 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 463 599 1.0E-35 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 SUPERFAMILY SSF51206 4 129 2.49E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 Gene3D G3DSA:3.10.580.10 142 287 2.3E-18 T 14-10-2018 ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 Pfam PF03445 Putative nucleotidyltransferase DUF294 297 424 6.0E-38 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 SUPERFAMILY SSF54631 150 271 1.77E-20 T 14-10-2018 ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 3.2E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 Pfam PF00571 CBS domain 215 269 6.5E-6 T 14-10-2018 IPR000644 CBS domain ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 Gene3D G3DSA:2.60.120.10 7 141 2.2E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0479 c952de746cadfca59f7c49b9a9d30d57 606 SMART SM00116 222 270 4.1E-5 T 14-10-2018 IPR000644 CBS domain ABED_1572 7912da053fa433eb883c2a118e3696ae 291 Pfam PF03547 Membrane transport protein 147 286 5.5E-9 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_1572 7912da053fa433eb883c2a118e3696ae 291 Pfam PF03547 Membrane transport protein 6 141 2.0E-10 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Gene3D G3DSA:3.30.70.1320 130 316 1.5E-269 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Pfam PF00873 AcrB/AcrD/AcrF family 1 994 1.8E-255 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Gene3D G3DSA:1.20.1640.10 490 991 1.5E-269 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 SUPERFAMILY SSF82714 693 772 1.7E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Gene3D G3DSA:3.30.2090.10 174 260 1.5E-269 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Gene3D G3DSA:3.30.2090.10 688 777 1.5E-269 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 SUPERFAMILY SSF82866 281 479 1.44E-39 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Gene3D G3DSA:3.30.70.1430 38 785 1.5E-269 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Gene3D G3DSA:3.30.70.1440 637 834 1.5E-269 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Gene3D G3DSA:1.20.1640.10 8 489 1.5E-269 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 SUPERFAMILY SSF82693 542 632 4.34E-8 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 Gene3D G3DSA:3.30.70.1430 544 636 1.5E-269 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.0E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 PRINTS PR00702 Acriflavin resistance protein family signature 347 368 4.0E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 PRINTS PR00702 Acriflavin resistance protein family signature 428 451 4.0E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.0E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 PRINTS PR00702 Acriflavin resistance protein family signature 320 343 4.0E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 4.0E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 PRINTS PR00702 Acriflavin resistance protein family signature 375 399 4.0E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 PRINTS PR00702 Acriflavin resistance protein family signature 529 546 4.0E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 SUPERFAMILY SSF82714 180 256 2.62E-5 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 SUPERFAMILY SSF82693 133 314 1.46E-10 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 SUPERFAMILY SSF82866 779 995 4.84E-48 T 14-10-2018 ABED_0435 715a7bd97f780a4e6d5e770fb65fb049 1008 SUPERFAMILY SSF82693 38 130 4.19E-18 T 14-10-2018 ABED_1235 f3751c00c739c5f35f7121002f7904d0 91 Gene3D G3DSA:4.10.520.10 1 91 6.4E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABED_1235 f3751c00c739c5f35f7121002f7904d0 91 SMART SM00411 1 90 6.7E-38 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABED_1235 f3751c00c739c5f35f7121002f7904d0 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-9 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABED_1235 f3751c00c739c5f35f7121002f7904d0 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-9 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABED_1235 f3751c00c739c5f35f7121002f7904d0 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-9 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABED_1235 f3751c00c739c5f35f7121002f7904d0 91 SUPERFAMILY SSF47729 1 90 7.07E-28 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABED_1235 f3751c00c739c5f35f7121002f7904d0 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.4E-28 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABED_1173 5d3fca63e5da983e7d2b7967825c33f0 340 Gene3D G3DSA:3.40.1780.10 19 339 3.0E-97 T 14-10-2018 ABED_1173 5d3fca63e5da983e7d2b7967825c33f0 340 SUPERFAMILY SSF111337 8 340 6.54E-110 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABED_1173 5d3fca63e5da983e7d2b7967825c33f0 340 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 6 340 1.2E-119 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABED_1173 5d3fca63e5da983e7d2b7967825c33f0 340 Gene3D G3DSA:2.40.10.240 68 170 3.0E-97 T 14-10-2018 ABED_1173 5d3fca63e5da983e7d2b7967825c33f0 340 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 5 340 40.062 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABED_1173 5d3fca63e5da983e7d2b7967825c33f0 340 Pfam PF02547 Queuosine biosynthesis protein 8 339 6.5E-106 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 Gene3D G3DSA:3.40.50.10710 292 450 3.5E-170 T 14-10-2018 ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 SUPERFAMILY SSF56281 91 508 2.23E-88 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 Hamap MF_01491 Ribonuclease J [rnj]. 86 640 41.315 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 Gene3D G3DSA:3.60.15.10 92 521 3.5E-170 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 91 637 9.5E-196 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 Gene3D G3DSA:3.10.20.580 534 639 6.7E-16 T 14-10-2018 ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 449 477 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 447 488 2.2E-8 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 Pfam PF00753 Metallo-beta-lactamase superfamily 102 251 3.9E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 SMART SM00849 103 300 7.2E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase ABED_0052 9960d0bba83b4f165cd68cc5752d6e10 640 PIRSF PIRSF004803 82 640 4.4E-231 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 ABED_1240 7317d903f5ec3c7aa1be0898d13eca21 591 SUPERFAMILY SSF52540 9 80 2.1E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1240 7317d903f5ec3c7aa1be0898d13eca21 591 Gene3D G3DSA:3.40.140.10 369 556 1.3E-42 T 14-10-2018 ABED_1240 7317d903f5ec3c7aa1be0898d13eca21 591 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 368 540 1.3E-17 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABED_1240 7317d903f5ec3c7aa1be0898d13eca21 591 Gene3D G3DSA:3.40.50.300 162 357 1.4E-11 T 14-10-2018 ABED_1240 7317d903f5ec3c7aa1be0898d13eca21 591 SUPERFAMILY SSF53927 370 549 2.8E-26 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABED_1240 7317d903f5ec3c7aa1be0898d13eca21 591 Gene3D G3DSA:3.40.50.300 1 138 2.3E-7 T 14-10-2018 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 Gene3D G3DSA:1.10.287.380 803 871 1.2E-10 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 853 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 SUPERFAMILY SSF52374 2 582 3.85E-127 T 14-10-2018 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 SUPERFAMILY SSF47323 584 815 4.67E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 Pfam PF08264 Anticodon-binding domain of tRNA 616 753 8.0E-28 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 SUPERFAMILY SSF46589 806 870 1.78E-13 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 Gene3D G3DSA:1.10.730.10 2 739 2.1E-286 T 14-10-2018 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 871 14.641 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 PRINTS PR00986 Valyl-tRNA synthetase signature 232 249 1.1E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 1.1E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 1.1E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 PRINTS PR00986 Valyl-tRNA synthetase signature 445 466 1.1E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 PRINTS PR00986 Valyl-tRNA synthetase signature 484 502 1.1E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 810 870 7.7E-15 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 Gene3D G3DSA:3.40.50.620 21 533 2.1E-286 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 SUPERFAMILY SSF50677 193 343 7.72E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 571 6.1E-187 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0537 62320fcba768463aa9a4a2b7bb622ac4 871 Gene3D G3DSA:3.90.740.10 178 344 2.1E-286 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABED_0316 38e1cdc1927a8f5673af5f75cddaeadb 179 Pfam PF02659 Putative manganese efflux pump 33 177 1.2E-46 T 14-10-2018 IPR003810 Putative manganese efflux pump ABED_0316 38e1cdc1927a8f5673af5f75cddaeadb 179 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 179 23.308 T 14-10-2018 IPR022929 Putative manganese efflux pump MntP ABED_1804 78ac32c93a23b88a6399ce5fcc4447ed 249 SUPERFAMILY SSF52540 8 207 5.21E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1804 78ac32c93a23b88a6399ce5fcc4447ed 249 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_1804 78ac32c93a23b88a6399ce5fcc4447ed 249 Gene3D G3DSA:3.40.50.300 1 232 2.0E-53 T 14-10-2018 ABED_1804 78ac32c93a23b88a6399ce5fcc4447ed 249 SMART SM00382 31 205 1.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1804 78ac32c93a23b88a6399ce5fcc4447ed 249 Pfam PF00005 ABC transporter 22 155 8.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0167 490f9d322f24b195c68f981490cb3432 639 Gene3D G3DSA:3.40.50.970 320 513 1.1E-62 T 14-10-2018 ABED_0167 490f9d322f24b195c68f981490cb3432 639 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_0167 490f9d322f24b195c68f981490cb3432 639 Gene3D G3DSA:3.40.50.920 517 639 7.6E-32 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABED_0167 490f9d322f24b195c68f981490cb3432 639 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 318 2.3E-118 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_0167 490f9d322f24b195c68f981490cb3432 639 Pfam PF02780 Transketolase, C-terminal domain 521 589 1.8E-6 T 14-10-2018 IPR033248 Transketolase, C-terminal domain ABED_0167 490f9d322f24b195c68f981490cb3432 639 Pfam PF02779 Transketolase, pyrimidine binding domain 337 503 7.6E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABED_0167 490f9d322f24b195c68f981490cb3432 639 SUPERFAMILY SSF52518 4 311 7.07E-98 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_0167 490f9d322f24b195c68f981490cb3432 639 ProSitePatterns PS00802 Transketolase signature 2. 447 463 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_0167 490f9d322f24b195c68f981490cb3432 639 Gene3D G3DSA:3.40.50.970 2 319 2.7E-105 T 14-10-2018 ABED_0167 490f9d322f24b195c68f981490cb3432 639 SUPERFAMILY SSF52922 512 636 4.06E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABED_0167 490f9d322f24b195c68f981490cb3432 639 SMART SM00861 338 504 2.1E-54 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABED_0167 490f9d322f24b195c68f981490cb3432 639 SUPERFAMILY SSF52518 328 505 1.51E-55 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_0167 490f9d322f24b195c68f981490cb3432 639 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 632 1.6E-230 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 ABED_1610 c8a5b093a014634b87e4ef4b21725f63 246 Gene3D G3DSA:3.20.20.70 1 246 1.8E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1610 c8a5b093a014634b87e4ef4b21725f63 246 Pfam PF00290 Tryptophan synthase alpha chain 2 243 1.3E-65 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1610 c8a5b093a014634b87e4ef4b21725f63 246 SUPERFAMILY SSF51366 3 237 9.42E-67 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABED_1610 c8a5b093a014634b87e4ef4b21725f63 246 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 33 46 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1610 c8a5b093a014634b87e4ef4b21725f63 246 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 3 237 5.5E-61 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1610 c8a5b093a014634b87e4ef4b21725f63 246 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 2 243 27.936 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1597 226d5b47d15e42c3239bd582642106df 437 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 239 250 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1597 226d5b47d15e42c3239bd582642106df 437 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 323 436 6.7E-12 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain ABED_1597 226d5b47d15e42c3239bd582642106df 437 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 3 436 6.9E-129 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 ABED_1597 226d5b47d15e42c3239bd582642106df 437 Pfam PF12801 4Fe-4S binding domain 56 102 9.0E-15 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1597 226d5b47d15e42c3239bd582642106df 437 Pfam PF13746 4Fe-4S dicluster domain 183 290 2.6E-43 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1597 226d5b47d15e42c3239bd582642106df 437 SUPERFAMILY SSF54862 68 283 1.26E-21 T 14-10-2018 ABED_1597 226d5b47d15e42c3239bd582642106df 437 Gene3D G3DSA:3.30.70.20 183 262 1.4E-6 T 14-10-2018 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 SUPERFAMILY SSF51905 4 447 4.46E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 602 3.1E-224 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 602 3.3E-36 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 SUPERFAMILY SSF56425 251 374 1.14E-36 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 PIRSF PIRSF000171 1 588 3.4E-30 T 14-10-2018 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 Gene3D G3DSA:1.20.58.100 442 559 6.8E-37 T 14-10-2018 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 Gene3D G3DSA:3.50.50.60 7 426 8.2E-144 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 Gene3D G3DSA:3.90.700.10 277 389 8.2E-144 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 SUPERFAMILY SSF46977 463 659 1.06E-56 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 Pfam PF00890 FAD binding domain 7 415 4.5E-126 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0283 a6e926f74372637508d6f8728b6e75f3 661 Gene3D G3DSA:1.10.472.70 560 653 3.4E-38 T 14-10-2018 ABED_0115 b3c2ccb4c9b2434d89ffe9c986d31c54 393 Hamap MF_02040 Iron-sulfur cluster carrier protein. 91 340 35.981 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein ABED_0115 b3c2ccb4c9b2434d89ffe9c986d31c54 393 Gene3D G3DSA:3.30.300.130 1 84 8.6E-6 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABED_0115 b3c2ccb4c9b2434d89ffe9c986d31c54 393 SUPERFAMILY SSF117916 2 67 1.9E-9 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABED_0115 b3c2ccb4c9b2434d89ffe9c986d31c54 393 SUPERFAMILY SSF52540 93 324 2.44E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0115 b3c2ccb4c9b2434d89ffe9c986d31c54 393 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 338 1.9E-95 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ABED_0115 b3c2ccb4c9b2434d89ffe9c986d31c54 393 Gene3D G3DSA:3.40.50.300 85 337 6.6E-82 T 14-10-2018 ABED_0326 058f6060272e3b6dfed7c970eee37371 147 Gene3D G3DSA:3.30.450.20 10 116 6.2E-21 T 14-10-2018 ABED_0326 058f6060272e3b6dfed7c970eee37371 147 SUPERFAMILY SSF55785 20 114 7.89E-24 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0326 058f6060272e3b6dfed7c970eee37371 147 Pfam PF08447 PAS fold 31 114 2.0E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_0326 058f6060272e3b6dfed7c970eee37371 147 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 108 2.7E-12 T 14-10-2018 IPR000014 PAS domain ABED_0345 98f4387be2df0282db800a2bb8797ba7 90 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 88 8.6E-36 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0345 98f4387be2df0282db800a2bb8797ba7 90 SMART SM01387 8 88 9.0E-47 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0345 98f4387be2df0282db800a2bb8797ba7 90 SUPERFAMILY SSF47060 3 88 5.3E-32 T 14-10-2018 IPR009068 S15/NS1, RNA-binding ABED_0345 98f4387be2df0282db800a2bb8797ba7 90 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.168 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0345 98f4387be2df0282db800a2bb8797ba7 90 Gene3D G3DSA:1.10.287.10 1 89 2.9E-31 T 14-10-2018 ABED_0345 98f4387be2df0282db800a2bb8797ba7 90 Pfam PF00312 Ribosomal protein S15 8 88 2.8E-33 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0345 98f4387be2df0282db800a2bb8797ba7 90 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0345 98f4387be2df0282db800a2bb8797ba7 90 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-23 T 14-10-2018 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 Pfam PF00206 Lyase 9 284 5.9E-53 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 Gene3D G3DSA:1.20.200.10 93 348 4.3E-88 T 14-10-2018 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 440 6.5E-26 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 2.7E-23 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.7E-23 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 2.7E-23 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 2.7E-23 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 Gene3D G3DSA:1.10.275.10 1 92 4.0E-31 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 441 5.6E-162 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 Gene3D G3DSA:1.10.40.30 349 440 1.1E-25 T 14-10-2018 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 SMART SM00998 349 441 4.2E-37 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 SUPERFAMILY SSF48557 3 441 1.19E-122 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.7E-8 T 14-10-2018 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.7E-8 T 14-10-2018 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.7E-8 T 14-10-2018 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.7E-8 T 14-10-2018 ABED_0019 ba4544a9643ddfa206128ad523c52be2 442 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABED_0736 082974c25fb11bc34607f16ff2c87510 798 SUPERFAMILY SSF58104 374 736 5.23E-55 T 14-10-2018 ABED_0736 082974c25fb11bc34607f16ff2c87510 798 Gene3D G3DSA:3.30.450.20 66 210 1.8E-57 T 14-10-2018 ABED_0736 082974c25fb11bc34607f16ff2c87510 798 Gene3D G3DSA:1.10.287.950 450 741 2.6E-56 T 14-10-2018 ABED_0736 082974c25fb11bc34607f16ff2c87510 798 Gene3D G3DSA:3.30.450.20 57 312 1.8E-57 T 14-10-2018 ABED_0736 082974c25fb11bc34607f16ff2c87510 798 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 559 713 2.3E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0736 082974c25fb11bc34607f16ff2c87510 798 Pfam PF02743 Cache domain 36 306 1.9E-30 T 14-10-2018 IPR033479 Double Cache domain 1 ABED_0736 082974c25fb11bc34607f16ff2c87510 798 SMART SM00283 500 749 8.7E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1050 8602b6361d13fb80a43764b68af1d1c5 163 Gene3D G3DSA:3.40.50.1240 1 163 8.7E-41 T 14-10-2018 IPR029033 Histidine phosphatase superfamily ABED_1050 8602b6361d13fb80a43764b68af1d1c5 163 SUPERFAMILY SSF53254 1 161 2.21E-28 T 14-10-2018 IPR029033 Histidine phosphatase superfamily ABED_1050 8602b6361d13fb80a43764b68af1d1c5 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 88 1.5E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABED_1465 ccb9de364bd8eb94b3f79be7b45e63b1 402 SUPERFAMILY SSF50182 185 252 2.32E-11 T 14-10-2018 IPR010920 LSM domain superfamily ABED_1465 ccb9de364bd8eb94b3f79be7b45e63b1 402 Gene3D G3DSA:2.30.30.60 202 244 3.8E-5 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABED_1465 ccb9de364bd8eb94b3f79be7b45e63b1 402 SUPERFAMILY SSF82689 323 397 1.7E-7 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ABED_1465 ccb9de364bd8eb94b3f79be7b45e63b1 402 Gene3D G3DSA:3.30.70.100 309 401 2.7E-5 T 14-10-2018 ABED_1465 ccb9de364bd8eb94b3f79be7b45e63b1 402 Pfam PF00924 Mechanosensitive ion channel 300 397 1.4E-12 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABED_1465 ccb9de364bd8eb94b3f79be7b45e63b1 402 Pfam PF00924 Mechanosensitive ion channel 143 312 1.2E-39 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABED_0180 5b97b2aec4b4f4533d74f3a1c05a9dbf 250 Gene3D G3DSA:1.10.10.60 153 247 1.3E-5 T 14-10-2018 ABED_0180 5b97b2aec4b4f4533d74f3a1c05a9dbf 250 SUPERFAMILY SSF46689 195 246 1.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0180 5b97b2aec4b4f4533d74f3a1c05a9dbf 250 Pfam PF02954 Bacterial regulatory protein, Fis family 210 244 7.2E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABED_0180 5b97b2aec4b4f4533d74f3a1c05a9dbf 250 SUPERFAMILY SSF52540 4 142 1.22E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0272 c661b6301c06b10d0759d0f8211b7c77 198 SUPERFAMILY SSF52833 2 194 3.75E-64 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_0272 c661b6301c06b10d0759d0f8211b7c77 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 192 7.7E-9 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABED_0272 c661b6301c06b10d0759d0f8211b7c77 198 PIRSF PIRSF000239 1 197 1.4E-58 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABED_0272 c661b6301c06b10d0759d0f8211b7c77 198 Pfam PF00578 AhpC/TSA family 3 137 5.1E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABED_0272 c661b6301c06b10d0759d0f8211b7c77 198 Gene3D G3DSA:3.40.30.10 1 196 5.4E-70 T 14-10-2018 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 294 4.1E-92 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 Gene3D G3DSA:3.40.1380.10 61 211 6.1E-86 T 14-10-2018 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 294 31.556 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 PRINTS PR00126 ATP synthase gamma subunit signature 172 189 4.0E-33 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 PRINTS PR00126 ATP synthase gamma subunit signature 79 98 4.0E-33 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 PRINTS PR00126 ATP synthase gamma subunit signature 241 260 4.0E-33 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 PRINTS PR00126 ATP synthase gamma subunit signature 272 293 4.0E-33 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 Pfam PF00231 ATP synthase 3 294 4.1E-85 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 SUPERFAMILY SSF52943 2 294 4.58E-80 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1481 34d743e0b8501adb87654debd7568ba6 295 Gene3D G3DSA:1.10.287.80 6 290 6.1E-86 T 14-10-2018 ABED_0257 ab0e61b9402fcb598336a7a5fdc40bca 310 SUPERFAMILY SSF52283 1 119 6.38E-25 T 14-10-2018 ABED_0257 ab0e61b9402fcb598336a7a5fdc40bca 310 Gene3D G3DSA:3.40.50.720 14 309 1.3E-99 T 14-10-2018 ABED_0257 ab0e61b9402fcb598336a7a5fdc40bca 310 Gene3D G3DSA:3.40.50.720 95 284 1.3E-99 T 14-10-2018 ABED_0257 ab0e61b9402fcb598336a7a5fdc40bca 310 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 309 9.0E-21 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ABED_0257 ab0e61b9402fcb598336a7a5fdc40bca 310 SUPERFAMILY SSF51735 99 286 7.19E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0257 ab0e61b9402fcb598336a7a5fdc40bca 310 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABED_0257 ab0e61b9402fcb598336a7a5fdc40bca 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 285 9.9E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABED_0510 3d14e61acd6784ca4e720989ff3085ff 261 SUPERFAMILY SSF52402 6 217 4.63E-48 T 14-10-2018 ABED_0510 3d14e61acd6784ca4e720989ff3085ff 261 PIRSF PIRSF004976 2 256 1.0E-66 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 ABED_0510 3d14e61acd6784ca4e720989ff3085ff 261 Gene3D G3DSA:3.40.50.620 3 252 3.3E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0510 3d14e61acd6784ca4e720989ff3085ff 261 Pfam PF01171 PP-loop family 27 196 7.5E-22 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ABED_1989 922c070c3dc51da7ad3649e74c75e258 363 SUPERFAMILY SSF50685 35 363 4.19E-112 T 14-10-2018 IPR036908 RlpA-like domain superfamily ABED_1989 922c070c3dc51da7ad3649e74c75e258 363 Pfam PF03562 MltA specific insert domain 48 268 5.8E-71 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 ABED_1989 922c070c3dc51da7ad3649e74c75e258 363 Gene3D G3DSA:2.40.40.10 39 362 3.5E-105 T 14-10-2018 IPR036908 RlpA-like domain superfamily ABED_1989 922c070c3dc51da7ad3649e74c75e258 363 Gene3D G3DSA:2.40.240.50 114 272 3.5E-105 T 14-10-2018 ABED_1989 922c070c3dc51da7ad3649e74c75e258 363 SMART SM00925 115 268 3.1E-72 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 ABED_1989 922c070c3dc51da7ad3649e74c75e258 363 PIRSF PIRSF019422 1 363 6.9E-124 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A ABED_1989 922c070c3dc51da7ad3649e74c75e258 363 Pfam PF06725 3D domain 287 359 9.4E-24 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 ABED_1490 7b86134beb9e1dba7c82d7cd3a9ccd1c 306 SUPERFAMILY SSF50486 205 305 4.71E-16 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 ABED_1490 7b86134beb9e1dba7c82d7cd3a9ccd1c 306 SUPERFAMILY SSF53328 4 207 8.5E-53 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_1490 7b86134beb9e1dba7c82d7cd3a9ccd1c 306 Gene3D G3DSA:3.40.50.170 2 206 3.2E-64 T 14-10-2018 ABED_1490 7b86134beb9e1dba7c82d7cd3a9ccd1c 306 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 300 29.015 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ABED_1490 7b86134beb9e1dba7c82d7cd3a9ccd1c 306 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 303 1.6E-73 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ABED_1490 7b86134beb9e1dba7c82d7cd3a9ccd1c 306 Gene3D G3DSA:3.10.25.10 207 306 2.3E-15 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_1490 7b86134beb9e1dba7c82d7cd3a9ccd1c 306 Pfam PF02911 Formyl transferase, C-terminal domain 204 297 1.4E-14 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_1490 7b86134beb9e1dba7c82d7cd3a9ccd1c 306 Pfam PF00551 Formyl transferase 4 166 4.0E-33 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_0990 d75dda3d238b4be29c8b516bc097e109 351 SUPERFAMILY SSF50129 1 183 1.23E-46 T 14-10-2018 IPR011032 GroES-like superfamily ABED_0990 d75dda3d238b4be29c8b516bc097e109 351 SUPERFAMILY SSF51735 140 314 3.68E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0990 d75dda3d238b4be29c8b516bc097e109 351 Gene3D G3DSA:3.40.50.720 162 292 5.3E-110 T 14-10-2018 ABED_0990 d75dda3d238b4be29c8b516bc097e109 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 128 3.2E-16 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABED_0990 d75dda3d238b4be29c8b516bc097e109 351 Gene3D G3DSA:3.90.180.10 18 338 5.3E-110 T 14-10-2018 ABED_0990 d75dda3d238b4be29c8b516bc097e109 351 Pfam PF00107 Zinc-binding dehydrogenase 177 281 3.2E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABED_0990 d75dda3d238b4be29c8b516bc097e109 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABED_1267 d13d31e35ee12b0e2d048a071beba341 122 SUPERFAMILY SSF52172 1 118 3.27E-29 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1267 d13d31e35ee12b0e2d048a071beba341 122 Gene3D G3DSA:3.40.50.2300 1 121 2.1E-29 T 14-10-2018 ABED_1267 d13d31e35ee12b0e2d048a071beba341 122 SMART SM00448 1 115 8.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1267 d13d31e35ee12b0e2d048a071beba341 122 Pfam PF00072 Response regulator receiver domain 3 115 2.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1872 f7633757618399d4318338797f2f74ea 416 SUPERFAMILY SSF81648 241 388 7.46E-36 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ABED_1872 f7633757618399d4318338797f2f74ea 416 SUPERFAMILY SSF81342 12 289 2.67E-80 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABED_1872 f7633757618399d4318338797f2f74ea 416 Gene3D G3DSA:1.20.810.10 1 415 9.8E-127 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 ABED_1872 f7633757618399d4318338797f2f74ea 416 Pfam PF00033 Cytochrome b/b6/petB 29 215 2.5E-57 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ABED_1872 f7633757618399d4318338797f2f74ea 416 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 395 1.9E-26 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ABED_0571 1ae8fbe80dfc96b56603fb426bf8d7e4 415 SMART SM00267 239 410 6.2E-41 T 14-10-2018 IPR000160 GGDEF domain ABED_0571 1ae8fbe80dfc96b56603fb426bf8d7e4 415 SUPERFAMILY SSF55073 255 410 4.71E-41 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0571 1ae8fbe80dfc96b56603fb426bf8d7e4 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 406 1.1E-38 T 14-10-2018 IPR000160 GGDEF domain ABED_0571 1ae8fbe80dfc96b56603fb426bf8d7e4 415 Gene3D G3DSA:3.30.70.270 249 414 7.5E-45 T 14-10-2018 ABED_0571 1ae8fbe80dfc96b56603fb426bf8d7e4 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 409 4.1E-42 T 14-10-2018 IPR000160 GGDEF domain ABED_0917 7d2685f1f7656a923ff0dc0c899977a1 178 Gene3D G3DSA:3.60.20.10 1 177 5.6E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_0917 7d2685f1f7656a923ff0dc0c899977a1 178 PIRSF PIRSF039093 1 178 4.4E-78 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ABED_0917 7d2685f1f7656a923ff0dc0c899977a1 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 38.182 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ABED_0917 7d2685f1f7656a923ff0dc0c899977a1 178 SUPERFAMILY SSF56235 2 176 1.16E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_0917 7d2685f1f7656a923ff0dc0c899977a1 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 175 1.5E-74 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ABED_0917 7d2685f1f7656a923ff0dc0c899977a1 178 Pfam PF00227 Proteasome subunit 2 174 1.2E-22 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 Pfam PF00990 Diguanylate cyclase, GGDEF domain 538 699 2.0E-45 T 14-10-2018 IPR000160 GGDEF domain ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 534 702 9.9E-43 T 14-10-2018 IPR000160 GGDEF domain ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 Pfam PF13426 PAS domain 425 519 1.2E-12 T 14-10-2018 IPR000014 PAS domain ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 SMART SM00091 413 479 0.0016 T 14-10-2018 IPR000014 PAS domain ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 SUPERFAMILY SSF55785 422 523 9.25E-21 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 SUPERFAMILY SSF55073 543 704 4.87E-44 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 SUPERFAMILY SSF55781 226 398 4.14E-11 T 14-10-2018 ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 Gene3D G3DSA:3.30.450.20 398 521 8.2E-28 T 14-10-2018 ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 Gene3D G3DSA:3.30.70.270 533 704 1.7E-54 T 14-10-2018 ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 Gene3D G3DSA:3.30.450.40 232 397 2.0E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 SMART SM00267 527 704 9.1E-55 T 14-10-2018 IPR000160 GGDEF domain ABED_1433 a0810fbcf73c056832cde98936c0c0b4 704 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 417 532 7.1E-16 T 14-10-2018 IPR000014 PAS domain ABED_1334 2cf814df4c230c474bf4a37185bfc0a4 158 Pfam PF08281 Sigma-70, region 4 96 141 3.1E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_1334 2cf814df4c230c474bf4a37185bfc0a4 158 Pfam PF04542 Sigma-70 region 2 3 63 2.4E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1334 2cf814df4c230c474bf4a37185bfc0a4 158 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 22 52 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_1334 2cf814df4c230c474bf4a37185bfc0a4 158 Gene3D G3DSA:1.10.10.10 79 156 2.3E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1334 2cf814df4c230c474bf4a37185bfc0a4 158 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 151 2.2E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABED_1334 2cf814df4c230c474bf4a37185bfc0a4 158 SUPERFAMILY SSF88659 97 154 1.0E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_1334 2cf814df4c230c474bf4a37185bfc0a4 158 SUPERFAMILY SSF88946 2 79 6.28E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1334 2cf814df4c230c474bf4a37185bfc0a4 158 Gene3D G3DSA:1.10.1740.10 1 67 1.7E-7 T 14-10-2018 ABED_1559 866c71f01a6b6593771ee3c6f66097b5 382 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 128 338 1.2E-11 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ABED_1559 866c71f01a6b6593771ee3c6f66097b5 382 Gene3D G3DSA:3.20.20.10 23 250 4.9E-159 T 14-10-2018 IPR029066 PLP-binding barrel ABED_1559 866c71f01a6b6593771ee3c6f66097b5 382 Gene3D G3DSA:2.40.37.10 14 377 4.9E-159 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABED_1559 866c71f01a6b6593771ee3c6f66097b5 382 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 14 381 2.9E-166 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 ABED_1559 866c71f01a6b6593771ee3c6f66097b5 382 SUPERFAMILY SSF51419 23 253 1.08E-41 T 14-10-2018 IPR029066 PLP-binding barrel ABED_1559 866c71f01a6b6593771ee3c6f66097b5 382 PIRSF PIRSF038941 3 382 6.9E-185 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 ABED_1559 866c71f01a6b6593771ee3c6f66097b5 382 SUPERFAMILY SSF50621 219 371 3.14E-34 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 SUPERFAMILY SSF46689 14 58 1.25E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 SMART SM00342 27 111 2.4E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 SUPERFAMILY SSF46689 63 114 3.45E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 Gene3D G3DSA:3.20.80.10 138 291 3.3E-29 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 Gene3D G3DSA:1.10.10.60 9 113 1.1E-27 T 14-10-2018 ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 SMART SM00871 138 290 6.9E-25 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 Pfam PF12833 Helix-turn-helix domain 33 112 2.1E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 Pfam PF06445 GyrI-like small molecule binding domain 139 290 1.4E-24 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain ABED_1828 080a6cc080ce03fdccd943014556ec3d 292 SUPERFAMILY SSF55136 139 290 3.4E-29 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABED_0432 699ca7bff38c061ddda740e12b06d4bc 110 Pfam PF00085 Thioredoxin 6 94 1.4E-11 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABED_0432 699ca7bff38c061ddda740e12b06d4bc 110 SUPERFAMILY SSF52833 2 104 5.34E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_0432 699ca7bff38c061ddda740e12b06d4bc 110 Gene3D G3DSA:3.40.30.10 1 104 2.2E-21 T 14-10-2018 ABED_1517 4f8c107c030693b190b2f002209aaaa7 113 SUPERFAMILY SSF75169 5 111 1.77E-7 T 14-10-2018 IPR027396 DsrEFH-like ABED_1517 4f8c107c030693b190b2f002209aaaa7 113 Gene3D G3DSA:3.40.1260.10 1 113 8.5E-35 T 14-10-2018 IPR027396 DsrEFH-like ABED_1946 45af4abf576eb82f40e03e3bd9455317 206 Pfam PF04536 TPM domain 100 180 1.3E-9 T 14-10-2018 IPR007621 TPM domain ABED_1946 45af4abf576eb82f40e03e3bd9455317 206 Gene3D G3DSA:3.10.310.50 86 204 7.7E-27 T 14-10-2018 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 SUPERFAMILY SSF46609 1 84 6.81E-33 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 Gene3D G3DSA:1.10.287.990 20 81 8.4E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 PRINTS PR01703 Manganese superoxide dismutase signature 154 166 2.9E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.9E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 PRINTS PR01703 Manganese superoxide dismutase signature 117 125 2.9E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.9E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.9E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 156 163 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 SUPERFAMILY SSF54719 82 189 2.1E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 Gene3D G3DSA:2.40.500.20 83 191 2.4E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 81 9.0E-31 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 188 9.3E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1464 4cf5223d2c89bb090ece02b7ceca4ed9 191 PIRSF PIRSF000349 1 191 4.8E-79 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABED_1959 240335c5fb492d3ee5c0c309ce41050e 318 Gene3D G3DSA:2.60.120.1440 103 232 1.9E-25 T 14-10-2018 ABED_1959 240335c5fb492d3ee5c0c309ce41050e 318 Pfam PF16220 Domain of unknown function (DUF4880) 7 46 1.5E-6 T 14-10-2018 IPR032623 FecR, N-terminal ABED_1959 240335c5fb492d3ee5c0c309ce41050e 318 Pfam PF04773 FecR protein 108 200 1.8E-19 T 14-10-2018 IPR006860 FecR protein ABED_1959 240335c5fb492d3ee5c0c309ce41050e 318 PIRSF PIRSF018266 1 318 1.3E-59 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ABED_1959 240335c5fb492d3ee5c0c309ce41050e 318 Pfam PF16344 Domain of unknown function (DUF4974) 217 316 1.1E-12 T 14-10-2018 IPR032508 Protein FecR, C-terminal ABED_1959 240335c5fb492d3ee5c0c309ce41050e 318 Gene3D G3DSA:3.55.50.30 245 318 1.9E-9 T 14-10-2018 ABED_0914 9d24150f13c76925844d33220f08f39a 184 SUPERFAMILY SSF52507 2 184 5.23E-51 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABED_0914 9d24150f13c76925844d33220f08f39a 184 Pfam PF02441 Flavoprotein 2 169 5.8E-25 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ABED_0914 9d24150f13c76925844d33220f08f39a 184 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 183 4.2E-50 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like ABED_0914 9d24150f13c76925844d33220f08f39a 184 Gene3D G3DSA:3.40.50.1950 1 184 7.6E-64 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 SUPERFAMILY SSF52518 57 467 1.33E-141 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 SUPERFAMILY SSF52922 702 888 1.3E-51 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 Gene3D G3DSA:3.40.50.920 707 890 4.4E-65 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 Gene3D G3DSA:3.40.50.970 56 470 2.5E-135 T 14-10-2018 ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 Gene3D G3DSA:3.40.50.970 471 706 3.6E-110 T 14-10-2018 ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 SUPERFAMILY SSF52518 473 701 5.77E-100 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 82 292 1.7E-9 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 PIRSF PIRSF000156 1 890 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ABED_1373 3b60df3556bdb43444b4b99508f81b52 890 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 7 889 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ABED_0104 184d24163eadbabb59d15409214b0baa 146 SUPERFAMILY SSF53335 16 121 4.87E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0104 184d24163eadbabb59d15409214b0baa 146 Gene3D G3DSA:3.40.50.150 7 138 5.4E-8 T 14-10-2018 ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 SMART SM00283 126 373 7.7E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 Pfam PF13682 Chemoreceptor zinc-binding domain 398 462 2.9E-8 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 SUPERFAMILY SSF58104 146 374 7.46E-54 T 14-10-2018 ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 147 176 7.3E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 253 282 7.3E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 224 251 7.3E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 7.3E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 Gene3D G3DSA:1.10.287.950 75 373 1.7E-57 T 14-10-2018 ABED_0821 b436e16b3410a5bcb44cc764a86e5b8e 502 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 185 341 1.8E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1871 755370fffa7d825de9d42a77c636209e 342 SUPERFAMILY SSF46626 213 327 1.63E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1871 755370fffa7d825de9d42a77c636209e 342 SUPERFAMILY SSF46626 97 210 2.47E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1871 755370fffa7d825de9d42a77c636209e 342 Gene3D G3DSA:1.10.760.10 209 305 2.8E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1871 755370fffa7d825de9d42a77c636209e 342 PIRSF PIRSF019225 1 212 1.7E-64 T 14-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted ABED_1871 755370fffa7d825de9d42a77c636209e 342 PIRSF PIRSF019225 208 342 3.1E-54 T 14-10-2018 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted ABED_1871 755370fffa7d825de9d42a77c636209e 342 Pfam PF00034 Cytochrome c 105 205 1.3E-16 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1871 755370fffa7d825de9d42a77c636209e 342 Gene3D G3DSA:1.10.760.10 72 207 1.2E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0478 d3881ac12b897f64412c175fc49b1dc6 203 SMART SM00479 30 203 3.6E-25 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_0478 d3881ac12b897f64412c175fc49b1dc6 203 SUPERFAMILY SSF53098 28 199 1.74E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_0478 d3881ac12b897f64412c175fc49b1dc6 203 Pfam PF00929 Exonuclease 32 193 8.5E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_0478 d3881ac12b897f64412c175fc49b1dc6 203 Gene3D G3DSA:3.30.420.10 25 201 2.1E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_1281 6e704a5ea5d268037ffd51da1f3f7545 272 Pfam PF01522 Polysaccharide deacetylase 67 202 3.8E-17 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABED_1281 6e704a5ea5d268037ffd51da1f3f7545 272 SUPERFAMILY SSF88713 37 269 5.93E-31 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABED_1281 6e704a5ea5d268037ffd51da1f3f7545 272 Gene3D G3DSA:3.20.20.370 62 271 7.5E-30 T 14-10-2018 ABED_1006 ffd67b7421d3d0b72073ab4d4aaffe1d 246 Pfam PF13098 Thioredoxin-like domain 111 230 5.7E-14 T 14-10-2018 IPR012336 Thioredoxin-like fold ABED_1006 ffd67b7421d3d0b72073ab4d4aaffe1d 246 SUPERFAMILY SSF52833 91 234 1.21E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1006 ffd67b7421d3d0b72073ab4d4aaffe1d 246 Gene3D G3DSA:3.40.30.10 107 240 2.5E-23 T 14-10-2018 ABED_0129 7a129bf1ae712648c7ea2b3d9946b396 257 SUPERFAMILY SSF53213 1 253 4.71E-58 T 14-10-2018 ABED_0129 7a129bf1ae712648c7ea2b3d9946b396 257 PIRSF PIRSF006157 1 254 4.6E-66 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 ABED_0129 7a129bf1ae712648c7ea2b3d9946b396 257 Gene3D G3DSA:3.40.830.10 1 253 1.8E-68 T 14-10-2018 ABED_0129 7a129bf1ae712648c7ea2b3d9946b396 257 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 5 252 8.4E-30 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ABED_2104 3cc5ba4299dcc47d08c7b33520434964 380 Pfam PF00899 ThiF family 18 252 1.9E-67 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ABED_2104 3cc5ba4299dcc47d08c7b33520434964 380 SMART SM00450 285 380 6.6E-10 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_2104 3cc5ba4299dcc47d08c7b33520434964 380 Pfam PF00581 Rhodanese-like domain 288 377 1.2E-12 T 14-10-2018 IPR001763 Rhodanese-like domain ABED_2104 3cc5ba4299dcc47d08c7b33520434964 380 Gene3D G3DSA:3.40.250.10 281 378 2.9E-20 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily ABED_2104 3cc5ba4299dcc47d08c7b33520434964 380 SUPERFAMILY SSF69572 2 344 7.85E-107 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ABED_2104 3cc5ba4299dcc47d08c7b33520434964 380 Gene3D G3DSA:3.40.50.720 10 261 9.5E-97 T 14-10-2018 ABED_0716 7c8fcf9524617225d2464970deebc35e 146 Gene3D G3DSA:3.30.230.10 71 146 1.4E-30 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_0716 7c8fcf9524617225d2464970deebc35e 146 Pfam PF00333 Ribosomal protein S5, N-terminal domain 8 71 6.0E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 ABED_0716 7c8fcf9524617225d2464970deebc35e 146 Gene3D G3DSA:3.30.160.20 1 69 7.7E-30 T 14-10-2018 ABED_0716 7c8fcf9524617225d2464970deebc35e 146 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 146 30.535 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABED_0716 7c8fcf9524617225d2464970deebc35e 146 SUPERFAMILY SSF54211 77 144 6.32E-22 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_0716 7c8fcf9524617225d2464970deebc35e 146 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 6 145 1.6E-63 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABED_0716 7c8fcf9524617225d2464970deebc35e 146 SUPERFAMILY SSF54768 4 73 2.41E-23 T 14-10-2018 ABED_0716 7c8fcf9524617225d2464970deebc35e 146 Pfam PF03719 Ribosomal protein S5, C-terminal domain 84 145 6.9E-25 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 ABED_0716 7c8fcf9524617225d2464970deebc35e 146 ProSitePatterns PS00585 Ribosomal protein S5 signature. 25 57 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site ABED_2126 3709a7e34ccf406523ddab21e0e7c8e4 152 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 1.4E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type ABED_2126 3709a7e34ccf406523ddab21e0e7c8e4 152 Pfam PF02082 Transcriptional regulator 1 79 6.5E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type ABED_2126 3709a7e34ccf406523ddab21e0e7c8e4 152 Gene3D G3DSA:1.10.10.10 1 143 9.3E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_2126 3709a7e34ccf406523ddab21e0e7c8e4 152 SUPERFAMILY SSF46785 2 132 1.82E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 Gene3D G3DSA:2.40.30.170 102 112 5.9E-9 T 14-10-2018 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 Pfam PF13437 HlyD family secretion protein 340 448 4.2E-16 T 14-10-2018 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 Gene3D G3DSA:1.10.287.470 148 237 5.9E-9 T 14-10-2018 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 84 107 1.5E-43 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 374 1.5E-43 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 410 1.5E-43 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 468 488 1.5E-43 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 126 146 1.5E-43 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 410 433 1.5E-43 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 453 468 1.5E-43 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 Gene3D G3DSA:2.40.50.100 113 147 5.9E-9 T 14-10-2018 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 SUPERFAMILY SSF51230 101 157 3.4E-7 T 14-10-2018 IPR011053 Single hybrid motif ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 78 489 2.0E-115 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 ABED_1066 03a51c9567cf6bdbeeb13c046724e89a 489 Gene3D G3DSA:2.40.30.170 352 471 1.4E-11 T 14-10-2018 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 Gene3D G3DSA:3.40.1450.10 76 296 4.6E-193 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 SUPERFAMILY SSF64158 76 294 5.23E-77 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 Gene3D G3DSA:3.40.720.10 5 488 4.6E-193 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 284 5.0E-72 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 491 43.597 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 4 488 5.8E-200 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 Pfam PF01676 Metalloenzyme superfamily 4 481 6.4E-69 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 PIRSF PIRSF001492 1 491 4.7E-191 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABED_1716 0a3ba7d01e8d1077ea55c24b22814c06 491 SUPERFAMILY SSF53649 3 487 2.49E-64 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABED_1736 a7e9a572dc4cbefdb15cc38fabcdfe71 327 SUPERFAMILY SSF51621 43 262 2.51E-35 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABED_1736 a7e9a572dc4cbefdb15cc38fabcdfe71 327 Gene3D G3DSA:3.20.20.60 1 265 1.3E-92 T 14-10-2018 ABED_1736 a7e9a572dc4cbefdb15cc38fabcdfe71 327 PIRSF PIRSF015582 1 324 8.1E-49 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like ABED_1736 a7e9a572dc4cbefdb15cc38fabcdfe71 327 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 80 240 2.6E-9 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.8E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.8E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.8E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 4.8E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 4.8E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 1.3E-36 T 14-10-2018 ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 Gene3D G3DSA:3.40.50.720 1 256 1.8E-52 T 14-10-2018 ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 SUPERFAMILY SSF51735 3 256 1.12E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 3.9E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.9E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0630 fa8b6bde0d4dead9d03f21245976b7a9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.9E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0600 e8f4cbae4571762034953b8e1c99f8db 359 SUPERFAMILY SSF51412 2 358 1.68E-46 T 14-10-2018 ABED_0600 e8f4cbae4571762034953b8e1c99f8db 359 Pfam PF03060 Nitronate monooxygenase 2 357 1.7E-89 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABED_0600 e8f4cbae4571762034953b8e1c99f8db 359 Gene3D G3DSA:3.20.20.70 4 359 2.0E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1188 70454d79ece0889275ee91fe805bc887 644 SMART SM00052 401 640 4.3E-57 T 14-10-2018 IPR001633 EAL domain ABED_1188 70454d79ece0889275ee91fe805bc887 644 Pfam PF00563 EAL domain 408 635 4.7E-62 T 14-10-2018 IPR001633 EAL domain ABED_1188 70454d79ece0889275ee91fe805bc887 644 Gene3D G3DSA:3.20.20.450 403 644 1.1E-72 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1188 70454d79ece0889275ee91fe805bc887 644 SUPERFAMILY SSF141868 408 639 5.49E-70 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1188 70454d79ece0889275ee91fe805bc887 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 387 1.5E-16 T 14-10-2018 IPR000160 GGDEF domain ABED_1188 70454d79ece0889275ee91fe805bc887 644 SMART SM00267 227 390 2.2E-18 T 14-10-2018 IPR000160 GGDEF domain ABED_1188 70454d79ece0889275ee91fe805bc887 644 Gene3D G3DSA:3.30.70.270 232 402 3.0E-25 T 14-10-2018 ABED_1188 70454d79ece0889275ee91fe805bc887 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 384 1.6E-19 T 14-10-2018 IPR000160 GGDEF domain ABED_1188 70454d79ece0889275ee91fe805bc887 644 SUPERFAMILY SSF55073 243 391 5.18E-22 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0099 9d013e8b3dda03e702b2302fdd258e74 192 Gene3D G3DSA:3.40.50.10610 24 189 1.5E-21 T 14-10-2018 ABED_0099 9d013e8b3dda03e702b2302fdd258e74 192 SUPERFAMILY SSF159594 42 191 1.96E-20 T 14-10-2018 ABED_0566 63946493061ca048cf17a742141b35be 256 SUPERFAMILY SSF52540 6 236 4.71E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0566 63946493061ca048cf17a742141b35be 256 SMART SM00382 31 228 5.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0566 63946493061ca048cf17a742141b35be 256 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0566 63946493061ca048cf17a742141b35be 256 Gene3D G3DSA:3.40.50.300 6 252 4.3E-56 T 14-10-2018 ABED_0566 63946493061ca048cf17a742141b35be 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 7 248 4.4E-100 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 ABED_0566 63946493061ca048cf17a742141b35be 256 Pfam PF00005 ABC transporter 22 176 1.5E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0492 eaf2ba8663f67545d1060ef7d6452272 1585 Gene3D G3DSA:2.160.20.10 29 412 3.0E-61 T 14-10-2018 IPR012334 Pectin lyase fold ABED_0492 eaf2ba8663f67545d1060ef7d6452272 1585 SUPERFAMILY SSF51126 50 306 5.34E-33 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor ABED_0492 eaf2ba8663f67545d1060ef7d6452272 1585 Gene3D G3DSA:2.160.20.110 426 601 3.9E-39 T 14-10-2018 ABED_0492 eaf2ba8663f67545d1060ef7d6452272 1585 Gene3D G3DSA:2.160.20.110 756 974 2.9E-30 T 14-10-2018 ABED_0492 eaf2ba8663f67545d1060ef7d6452272 1585 Pfam PF07581 The GLUG motif 537 559 0.0022 T 14-10-2018 IPR011493 GLUG ABED_0492 eaf2ba8663f67545d1060ef7d6452272 1585 Pfam PF05860 haemagglutination activity domain 30 139 9.8E-22 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0492 eaf2ba8663f67545d1060ef7d6452272 1585 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 61 136 3.0E-22 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0492 eaf2ba8663f67545d1060ef7d6452272 1585 SMART SM00912 27 139 7.2E-41 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_1327 17db976b937b1e035cb6d7a995cface3 748 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 745 5.2E-243 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 Pfam PF07503 HypF finger 157 190 9.7E-16 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 Pfam PF07503 HypF finger 107 140 1.1E-12 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 Pfam PF01300 Telomere recombination 210 382 1.4E-53 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 PIRSF PIRSF006256 1 748 6.2E-281 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 Gene3D G3DSA:3.90.870.50 6 362 3.1E-146 T 14-10-2018 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 Pfam PF00708 Acylphosphatase 5 88 3.9E-24 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 SUPERFAMILY SSF54975 2 89 7.41E-24 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 Gene3D G3DSA:3.30.420.350 488 732 7.8E-121 T 14-10-2018 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 SUPERFAMILY SSF55821 174 390 2.66E-47 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABED_1327 17db976b937b1e035cb6d7a995cface3 748 Gene3D G3DSA:3.30.420.360 384 744 7.8E-121 T 14-10-2018 ABED_1327 17db976b937b1e035cb6d7a995cface3 748 Gene3D G3DSA:3.30.110.120 253 371 3.1E-146 T 14-10-2018 ABED_0852 2a3ade962b7e3fc745c98d293b525ed7 311 Pfam PF14827 Double sensory domain of two-component sensor kinase 45 204 6.8E-14 T 14-10-2018 IPR029150 Double Cache domain 3 ABED_0852 2a3ade962b7e3fc745c98d293b525ed7 311 SUPERFAMILY SSF103190 47 181 2.04E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 Gene3D G3DSA:2.40.10.170 1 76 7.2E-29 T 14-10-2018 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 Gene3D G3DSA:1.10.1140.10 348 464 3.8E-58 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 SUPERFAMILY SSF47917 348 463 5.49E-53 T 14-10-2018 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 4.9E-65 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 74 1.7E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 55.522 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 SMART SM00382 144 322 6.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 SUPERFAMILY SSF52540 78 350 2.73E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 SUPERFAMILY SSF50615 2 76 3.14E-22 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 463 6.3E-255 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 PIRSF PIRSF039072 1 464 7.3E-260 T 14-10-2018 ABED_1480 66a3798bc424b1ba4d8a161611aca5aa 464 Gene3D G3DSA:3.40.50.300 77 347 3.1E-113 T 14-10-2018 ABED_0614 087491ea93a46b677ae8ca961d30ee47 433 Gene3D G3DSA:3.30.70.270 260 433 7.2E-47 T 14-10-2018 ABED_0614 087491ea93a46b677ae8ca961d30ee47 433 Pfam PF00990 Diguanylate cyclase, GGDEF domain 269 431 2.8E-37 T 14-10-2018 IPR000160 GGDEF domain ABED_0614 087491ea93a46b677ae8ca961d30ee47 433 SUPERFAMILY SSF55073 273 433 2.75E-38 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0614 087491ea93a46b677ae8ca961d30ee47 433 SMART SM00267 256 433 2.7E-32 T 14-10-2018 IPR000160 GGDEF domain ABED_0614 087491ea93a46b677ae8ca961d30ee47 433 Gene3D G3DSA:1.20.120.30 149 254 4.3E-9 T 14-10-2018 ABED_0614 087491ea93a46b677ae8ca961d30ee47 433 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 432 8.1E-41 T 14-10-2018 IPR000160 GGDEF domain ABED_0614 087491ea93a46b677ae8ca961d30ee47 433 Pfam PF13682 Chemoreceptor zinc-binding domain 160 224 7.8E-10 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain ABED_0158 e3ff34a1b7e964e8f9bddc3cf19fe626 103 SUPERFAMILY SSF54913 3 102 1.07E-33 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ABED_0158 e3ff34a1b7e964e8f9bddc3cf19fe626 103 Pfam PF03091 CutA1 divalent ion tolerance protein 4 100 3.9E-35 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 ABED_0158 e3ff34a1b7e964e8f9bddc3cf19fe626 103 Gene3D G3DSA:3.30.70.120 1 103 2.7E-36 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABED_1523 5de4f98519046f3b51e01ed902a06fc6 319 SUPERFAMILY SSF141523 61 194 1.83E-9 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABED_1523 5de4f98519046f3b51e01ed902a06fc6 319 SUPERFAMILY SSF54427 209 317 3.5E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily ABED_1523 5de4f98519046f3b51e01ed902a06fc6 319 Gene3D G3DSA:2.40.440.10 59 193 1.1E-7 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABED_1523 5de4f98519046f3b51e01ed902a06fc6 319 Pfam PF03734 L,D-transpeptidase catalytic domain 64 193 1.7E-12 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABED_0922 3b4ff0218b88c3ff2bef5286e8c3c83d 314 SUPERFAMILY SSF110997 244 303 8.11E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABED_0922 3b4ff0218b88c3ff2bef5286e8c3c83d 314 Gene3D G3DSA:2.40.40.10 77 170 1.2E-37 T 14-10-2018 IPR036908 RlpA-like domain superfamily ABED_0922 3b4ff0218b88c3ff2bef5286e8c3c83d 314 Pfam PF05036 Sporulation related domain 244 303 4.6E-9 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 ABED_0922 3b4ff0218b88c3ff2bef5286e8c3c83d 314 Gene3D G3DSA:3.30.70.1070 245 313 1.5E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABED_0922 3b4ff0218b88c3ff2bef5286e8c3c83d 314 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 292 1.9E-51 T 14-10-2018 IPR012997 Rare lipoprotein A ABED_0922 3b4ff0218b88c3ff2bef5286e8c3c83d 314 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 25 169 24.426 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 ABED_0922 3b4ff0218b88c3ff2bef5286e8c3c83d 314 SUPERFAMILY SSF50685 81 167 4.19E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily ABED_0922 3b4ff0218b88c3ff2bef5286e8c3c83d 314 Pfam PF03330 Lytic transglycolase 78 166 1.8E-28 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain ABED_0491 ff1e90a81e11800a339df56996771913 552 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 206 493 1.6E-19 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal ABED_0491 ff1e90a81e11800a339df56996771913 552 Gene3D G3DSA:3.10.20.310 51 143 1.8E-17 T 14-10-2018 ABED_0491 ff1e90a81e11800a339df56996771913 552 Pfam PF08479 POTRA domain, ShlB-type 68 143 1.6E-13 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type ABED_0491 ff1e90a81e11800a339df56996771913 552 Gene3D G3DSA:2.40.160.50 186 549 2.1E-58 T 14-10-2018 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 Gene3D G3DSA:3.40.50.10990 224 342 3.0E-7 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 203 37.421 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 SUPERFAMILY SSF142695 205 341 1.31E-15 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 Gene3D G3DSA:3.90.870.10 1 206 1.0E-80 T 14-10-2018 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 Pfam PF00925 GTP cyclohydrolase II 292 339 6.4E-9 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 SUPERFAMILY SSF55821 5 206 4.81E-78 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABED_1149 df95042743f160f235c2ab11ae74c02f 343 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 4.4E-77 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 4.2E-72 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 PIRSF PIRSF001259 2 254 1.7E-79 T 14-10-2018 ABED_1149 df95042743f160f235c2ab11ae74c02f 343 PIRSF PIRSF001259 286 343 2.4E-9 T 14-10-2018 ABED_1385 db230cbca3a37459f7496bff43387c4d 268 Pfam PF00075 RNase H 100 244 7.9E-36 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ABED_1385 db230cbca3a37459f7496bff43387c4d 268 SUPERFAMILY SSF53098 100 245 3.41E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_1385 db230cbca3a37459f7496bff43387c4d 268 Gene3D G3DSA:3.30.420.10 87 261 4.3E-49 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_0273 ed5662d87c8bbd25c785fed3f122f83c 90 Gene3D G3DSA:3.30.70.20 2 83 6.7E-23 T 14-10-2018 ABED_0273 ed5662d87c8bbd25c785fed3f122f83c 90 SUPERFAMILY SSF54862 5 69 6.02E-15 T 14-10-2018 ABED_0273 ed5662d87c8bbd25c785fed3f122f83c 90 Pfam PF12838 4Fe-4S dicluster domain 9 63 8.9E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0273 ed5662d87c8bbd25c785fed3f122f83c 90 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 Gene3D G3DSA:1.10.520.10 432 733 1.5E-145 T 14-10-2018 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 Pfam PF00141 Peroxidase 401 707 6.8E-39 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 Pfam PF00141 Peroxidase 74 394 1.5E-47 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 Gene3D G3DSA:1.10.420.10 586 709 1.5E-145 T 14-10-2018 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00458 Haem peroxidase superfamily signature 315 330 6.1E-20 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00458 Haem peroxidase superfamily signature 147 164 6.1E-20 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00458 Haem peroxidase superfamily signature 165 177 6.1E-20 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00458 Haem peroxidase superfamily signature 256 271 6.1E-20 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00458 Haem peroxidase superfamily signature 87 101 6.1E-20 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 Gene3D G3DSA:1.10.520.10 19 429 4.4E-216 T 14-10-2018 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 SUPERFAMILY SSF48113 429 733 1.34E-106 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 Hamap MF_01961 Catalase-peroxidase [katG]. 8 734 40.83 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 SUPERFAMILY SSF48113 20 428 6.48E-152 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 20 734 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 ProSitePatterns PS00436 Peroxidases active site signature. 87 98 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 Gene3D G3DSA:1.10.420.20 188 396 4.4E-216 T 14-10-2018 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 256 266 - T 14-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 64 89 1.0E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 1.0E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 23 45 1.0E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 264 287 1.0E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABED_1439 8096bdbd69fff4be9a3e603a26c0ef70 735 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 49 62 1.0E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ABED_2060 055ebd88c1cf44134dbfc023624630de 354 Gene3D G3DSA:3.30.470.20 167 353 3.3E-31 T 14-10-2018 ABED_2060 055ebd88c1cf44134dbfc023624630de 354 Pfam PF13535 ATP-grasp domain 120 261 2.0E-25 T 14-10-2018 ABED_2060 055ebd88c1cf44134dbfc023624630de 354 Gene3D G3DSA:3.40.50.20 1 103 1.3E-22 T 14-10-2018 ABED_2060 055ebd88c1cf44134dbfc023624630de 354 Gene3D G3DSA:3.30.1490.20 104 166 7.8E-10 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABED_2060 055ebd88c1cf44134dbfc023624630de 354 SMART SM01209 88 262 0.0068 T 14-10-2018 ABED_2060 055ebd88c1cf44134dbfc023624630de 354 SUPERFAMILY SSF56059 89 288 7.07E-38 T 14-10-2018 ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 SUPERFAMILY SSF55326 406 567 2.09E-45 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 SUPERFAMILY SSF56042 570 727 4.64E-29 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 SUPERFAMILY SSF56042 204 427 2.54E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Pfam PF00586 AIR synthase related protein, N-terminal domain 456 559 3.9E-20 T 14-10-2018 IPR016188 PurM-like, N-terminal domain ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Pfam PF00586 AIR synthase related protein, N-terminal domain 86 192 5.3E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 SUPERFAMILY SSF55326 36 198 2.39E-46 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Gene3D G3DSA:3.90.650.10 29 370 1.2E-131 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Gene3D G3DSA:3.30.1330.10 43 197 1.2E-131 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 17 732 3.7E-283 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Gene3D G3DSA:3.30.1330.10 393 563 1.4E-50 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Gene3D G3DSA:3.90.650.10 568 735 5.1E-32 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 737 299.739 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 PIRSF PIRSF001587 2 736 4.7E-300 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 359 1.2E-31 T 14-10-2018 IPR010918 PurM-like, C-terminal domain ABED_1522 e1ff2f36da42b11c7bfb4df02a405a1b 737 Pfam PF02769 AIR synthase related protein, C-terminal domain 574 707 2.5E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain ABED_0912 2a8b687cd5b5360f372600d065bdf321 189 SUPERFAMILY SSF52540 1 186 5.96E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0912 2a8b687cd5b5360f372600d065bdf321 189 Gene3D G3DSA:3.40.50.300 1 188 2.7E-40 T 14-10-2018 ABED_0912 2a8b687cd5b5360f372600d065bdf321 189 Pfam PF02223 Thymidylate kinase 5 182 3.3E-34 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 ABED_0912 2a8b687cd5b5360f372600d065bdf321 189 Hamap MF_00165 Thymidylate kinase [tmk]. 1 186 19.034 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABED_0912 2a8b687cd5b5360f372600d065bdf321 189 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 182 4.6E-40 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABED_1224 82c903c9c949db2c150356851192dffc 401 Pfam PF02687 FtsX-like permease family 294 393 1.1E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABED_1224 82c903c9c949db2c150356851192dffc 401 Pfam PF12704 MacB-like periplasmic core domain 28 169 1.8E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain ABED_0205 7d21800f12e8c672c91325bf073d1f2f 303 Pfam PF02219 Methylenetetrahydrofolate reductase 11 302 1.0E-27 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ABED_0205 7d21800f12e8c672c91325bf073d1f2f 303 Gene3D G3DSA:3.20.20.220 4 303 4.6E-39 T 14-10-2018 ABED_0205 7d21800f12e8c672c91325bf073d1f2f 303 SUPERFAMILY SSF51730 13 302 3.73E-49 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like ABED_2032 d2c330a9baf0a4d14aa3d2a21c07b52d 462 Pfam PF02321 Outer membrane efflux protein 279 456 6.3E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_2032 d2c330a9baf0a4d14aa3d2a21c07b52d 462 Pfam PF02321 Outer membrane efflux protein 60 245 2.8E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_2032 d2c330a9baf0a4d14aa3d2a21c07b52d 462 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 457 1.1E-104 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 ABED_2032 d2c330a9baf0a4d14aa3d2a21c07b52d 462 SUPERFAMILY SSF56954 1 457 2.35E-98 T 14-10-2018 ABED_2032 d2c330a9baf0a4d14aa3d2a21c07b52d 462 Gene3D G3DSA:1.20.1600.10 51 457 2.5E-117 T 14-10-2018 ABED_2032 d2c330a9baf0a4d14aa3d2a21c07b52d 462 Gene3D G3DSA:2.20.200.10 97 347 2.5E-117 T 14-10-2018 ABED_0173 a44f82da294b66454c6348b225af150a 212 SMART SM00422 10 80 9.1E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABED_0173 a44f82da294b66454c6348b225af150a 212 Pfam PF13411 MerR HTH family regulatory protein 10 78 1.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABED_0173 a44f82da294b66454c6348b225af150a 212 SUPERFAMILY SSF46955 9 116 2.12E-14 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily ABED_0173 a44f82da294b66454c6348b225af150a 212 Gene3D G3DSA:1.10.1660.10 2 122 2.9E-16 T 14-10-2018 ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 SUPERFAMILY SSF46785 1 87 5.09E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 Gene3D G3DSA:1.10.10.10 1 83 6.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 Gene3D G3DSA:3.40.190.290 84 272 3.9E-20 T 14-10-2018 ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 Pfam PF03466 LysR substrate binding domain 89 262 3.1E-18 T 14-10-2018 IPR005119 LysR, substrate-binding ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABED_0772 5bc4cfbabb756ae9b31f6e3aa7dd27e4 275 SUPERFAMILY SSF53850 87 263 5.25E-18 T 14-10-2018 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 126 145 3.9E-21 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 50 74 3.9E-21 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 206 219 3.9E-21 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 175 197 3.9E-21 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 10 33 3.9E-21 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 SUPERFAMILY SSF81342 3 219 1.31E-33 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 Gene3D G3DSA:1.20.950.20 1 203 1.1E-53 T 14-10-2018 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 6 218 5.9E-75 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1330 3c5a6d7fd4b86e063ba3aa3507cf1cd9 221 Pfam PF01292 Prokaryotic cytochrome b561 8 214 9.6E-26 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 Gene3D G3DSA:3.90.226.10 27 286 4.9E-82 T 14-10-2018 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 Pfam PF01039 Carboxyl transferase domain 64 242 8.5E-18 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 283 37.975 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 2.3E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 2.3E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 2.3E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 2.3E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 2.3E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 SUPERFAMILY SSF52096 28 282 2.35E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABED_0421 cb7ba3d3d2f4a6673e82b2531e2873d7 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 13 283 2.3E-128 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_2133 44e3c6384762f43788784e4e415862eb 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain ABED_2133 44e3c6384762f43788784e4e415862eb 79 Gene3D G3DSA:3.30.110.40 7 79 9.5E-31 T 14-10-2018 IPR036868 TusA-like domain superfamily ABED_2133 44e3c6384762f43788784e4e415862eb 79 Pfam PF01206 Sulfurtransferase TusA 11 79 3.9E-21 T 14-10-2018 IPR001455 TusA-like domain ABED_2133 44e3c6384762f43788784e4e415862eb 79 SUPERFAMILY SSF64307 6 79 6.41E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily ABED_1714 10b1f79e620ded8c7983da7ced4a6564 392 SUPERFAMILY SSF53244 251 389 5.95E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_1714 10b1f79e620ded8c7983da7ced4a6564 392 Gene3D G3DSA:3.90.190.20 258 388 1.8E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABED_1714 10b1f79e620ded8c7983da7ced4a6564 392 SUPERFAMILY SSF53623 79 191 3.14E-28 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_1714 10b1f79e620ded8c7983da7ced4a6564 392 Pfam PF08245 Mur ligase middle domain 82 187 2.1E-18 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABED_1714 10b1f79e620ded8c7983da7ced4a6564 392 Gene3D G3DSA:3.40.1190.10 76 257 9.0E-31 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABED_1714 10b1f79e620ded8c7983da7ced4a6564 392 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 29 387 3.2E-94 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABED_1920 064c605515deade461c4a80ba3aeff4b 228 Pfam PF01553 Acyltransferase 63 172 1.8E-20 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABED_1920 064c605515deade461c4a80ba3aeff4b 228 SUPERFAMILY SSF69593 15 210 6.8E-34 T 14-10-2018 ABED_1920 064c605515deade461c4a80ba3aeff4b 228 SMART SM00563 61 175 1.6E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABED_1920 064c605515deade461c4a80ba3aeff4b 228 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 58 172 1.9E-31 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 Gene3D G3DSA:3.30.1490.20 148 206 2.6E-51 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 98 109 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 SUPERFAMILY SSF52440 1 128 5.08E-22 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 277 304 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 Gene3D G3DSA:3.30.470.20 127 305 2.6E-51 T 14-10-2018 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 Pfam PF07478 D-ala D-ala ligase C-terminus 159 306 1.6E-30 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 325 1.7E-78 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 SUPERFAMILY SSF56059 131 309 1.24E-30 T 14-10-2018 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 Gene3D G3DSA:3.40.50.20 1 120 1.3E-27 T 14-10-2018 ABED_0693 51b59d2a1f0e8f89259bce102f93160b 347 Pfam PF01820 D-ala D-ala ligase N-terminus 2 120 3.8E-17 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_0983 66fc0748192bcdcfccde943082d3df40 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 220 2.0E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0983 66fc0748192bcdcfccde943082d3df40 223 SMART SM00862 152 220 2.8E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0983 66fc0748192bcdcfccde943082d3df40 223 Gene3D G3DSA:3.40.50.2300 3 126 1.1E-28 T 14-10-2018 ABED_0983 66fc0748192bcdcfccde943082d3df40 223 Gene3D G3DSA:1.10.10.10 127 223 1.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0983 66fc0748192bcdcfccde943082d3df40 223 Pfam PF00072 Response regulator receiver domain 9 118 9.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0983 66fc0748192bcdcfccde943082d3df40 223 SMART SM00448 7 118 2.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0983 66fc0748192bcdcfccde943082d3df40 223 SUPERFAMILY SSF52172 5 173 5.98E-31 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1164 8a616434b14c4380f21157eef2758513 314 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 301 8.5E-35 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ABED_1164 8a616434b14c4380f21157eef2758513 314 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 24 301 6.4E-49 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ABED_1164 8a616434b14c4380f21157eef2758513 314 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 14 311 23.789 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ABED_0565 b163e457b3701056086e53e6f4918388 343 SUPERFAMILY SSF101960 6 336 4.45E-59 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ABED_0565 b163e457b3701056086e53e6f4918388 343 Pfam PF01458 Uncharacterized protein family (UPF0051) 98 317 2.8E-52 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ABED_0409 99a006a35909c1310c6c124c0a3c89e9 225 SMART SM00448 4 115 4.6E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0409 99a006a35909c1310c6c124c0a3c89e9 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 1.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0409 99a006a35909c1310c6c124c0a3c89e9 225 SUPERFAMILY SSF46894 123 223 8.22E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_0409 99a006a35909c1310c6c124c0a3c89e9 225 Gene3D G3DSA:3.40.50.2300 1 124 8.6E-41 T 14-10-2018 ABED_0409 99a006a35909c1310c6c124c0a3c89e9 225 Pfam PF00072 Response regulator receiver domain 6 116 2.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0409 99a006a35909c1310c6c124c0a3c89e9 225 Gene3D G3DSA:1.10.10.10 125 225 4.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0409 99a006a35909c1310c6c124c0a3c89e9 225 SMART SM00862 147 222 3.1E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0409 99a006a35909c1310c6c124c0a3c89e9 225 SUPERFAMILY SSF52172 2 127 5.69E-39 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1446 ba95e07e6781176b086105173c5fbb08 851 Pfam PF00563 EAL domain 614 843 4.6E-63 T 14-10-2018 IPR001633 EAL domain ABED_1446 ba95e07e6781176b086105173c5fbb08 851 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 429 594 3.1E-55 T 14-10-2018 IPR000160 GGDEF domain ABED_1446 ba95e07e6781176b086105173c5fbb08 851 Pfam PF00990 Diguanylate cyclase, GGDEF domain 433 590 5.0E-49 T 14-10-2018 IPR000160 GGDEF domain ABED_1446 ba95e07e6781176b086105173c5fbb08 851 Gene3D G3DSA:3.20.20.450 607 849 7.5E-72 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1446 ba95e07e6781176b086105173c5fbb08 851 SUPERFAMILY SSF141868 613 844 5.36E-68 T 14-10-2018 IPR035919 EAL domain superfamily ABED_1446 ba95e07e6781176b086105173c5fbb08 851 SMART SM00052 606 848 6.5E-64 T 14-10-2018 IPR001633 EAL domain ABED_1446 ba95e07e6781176b086105173c5fbb08 851 Gene3D G3DSA:3.30.70.270 419 595 1.9E-54 T 14-10-2018 ABED_1446 ba95e07e6781176b086105173c5fbb08 851 SMART SM00267 422 595 3.8E-57 T 14-10-2018 IPR000160 GGDEF domain ABED_1446 ba95e07e6781176b086105173c5fbb08 851 SUPERFAMILY SSF55073 438 594 3.3E-47 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 SMART SM00382 107 257 2.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 Pfam PF06689 ClpX C4-type zinc finger 5 40 1.7E-10 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 406 47.97 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 310 380 2.9E-13 T 14-10-2018 IPR019489 Clp ATPase, C-terminal ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 Gene3D G3DSA:1.10.8.60 308 407 1.6E-38 T 14-10-2018 ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 SMART SM00994 3 42 8.2E-12 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 SMART SM01086 309 402 6.9E-31 T 14-10-2018 IPR019489 Clp ATPase, C-terminal ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 Gene3D G3DSA:3.30.50.30 1 43 1.4E-6 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 302 1.8E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 403 5.3E-186 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 SUPERFAMILY SSF57716 4 39 8.27E-6 T 14-10-2018 ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 Gene3D G3DSA:3.40.50.300 51 307 9.4E-105 T 14-10-2018 ABED_2024 48404ebdd3f848c2cc3e1c4223f81cb0 407 SUPERFAMILY SSF52540 60 396 2.54E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0647 992652f231a47ade659c63448d1fe983 132 PRINTS PR00813 Bacterial general secretion pathway protein G signature 40 58 1.5E-7 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABED_0647 992652f231a47ade659c63448d1fe983 132 PRINTS PR00813 Bacterial general secretion pathway protein G signature 4 29 1.5E-7 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABED_0647 992652f231a47ade659c63448d1fe983 132 Gene3D G3DSA:3.30.700.10 5 128 6.8E-14 T 14-10-2018 ABED_0647 992652f231a47ade659c63448d1fe983 132 SUPERFAMILY SSF54523 5 94 3.45E-12 T 14-10-2018 ABED_0647 992652f231a47ade659c63448d1fe983 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 6.2E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABED_1329 c2b8230ded7b72841f522899cd0e69de 186 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.4E-14 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1329 c2b8230ded7b72841f522899cd0e69de 186 PRINTS PR00446 Hydrogen uptake protein signature 38 55 1.4E-14 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1329 c2b8230ded7b72841f522899cd0e69de 186 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.4E-14 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1329 c2b8230ded7b72841f522899cd0e69de 186 PRINTS PR00446 Hydrogen uptake protein signature 59 69 1.4E-14 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1329 c2b8230ded7b72841f522899cd0e69de 186 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 152 1.9E-35 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1329 c2b8230ded7b72841f522899cd0e69de 186 SUPERFAMILY SSF53163 1 163 9.94E-37 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABED_1329 c2b8230ded7b72841f522899cd0e69de 186 Pfam PF01750 Hydrogenase maturation protease 22 150 2.9E-26 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 ABED_1329 c2b8230ded7b72841f522899cd0e69de 186 Gene3D G3DSA:3.40.50.1450 1 166 2.3E-27 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABED_1022 4909aee39e84a977ccfa220e6a168b58 263 Gene3D G3DSA:3.40.50.10860 4 243 3.0E-71 T 14-10-2018 ABED_1022 4909aee39e84a977ccfa220e6a168b58 263 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 253 9.8E-66 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABED_1022 4909aee39e84a977ccfa220e6a168b58 263 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 85 9.5E-19 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABED_1022 4909aee39e84a977ccfa220e6a168b58 263 SUPERFAMILY SSF53223 3 98 2.48E-22 T 14-10-2018 ABED_1022 4909aee39e84a977ccfa220e6a168b58 263 SUPERFAMILY SSF51735 99 257 6.16E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1022 4909aee39e84a977ccfa220e6a168b58 263 Gene3D G3DSA:3.40.50.720 99 235 3.0E-71 T 14-10-2018 ABED_1022 4909aee39e84a977ccfa220e6a168b58 263 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 112 156 9.3E-6 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ABED_1191 a0ff33ad2f042d2e0f5545a659fdec7f 327 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 322 31.37 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ABED_1191 a0ff33ad2f042d2e0f5545a659fdec7f 327 Gene3D G3DSA:1.20.970.10 2 53 1.5E-5 T 14-10-2018 ABED_1191 a0ff33ad2f042d2e0f5545a659fdec7f 327 Gene3D G3DSA:3.40.1030.10 58 327 1.2E-96 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABED_1191 a0ff33ad2f042d2e0f5545a659fdec7f 327 Pfam PF00591 Glycosyl transferase family, a/b domain 61 312 1.6E-84 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABED_1191 a0ff33ad2f042d2e0f5545a659fdec7f 327 SUPERFAMILY SSF52418 63 321 1.7E-86 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABED_1191 a0ff33ad2f042d2e0f5545a659fdec7f 327 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 321 2.1E-102 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ABED_1933 3eb2712dd65ab14b54aad9c95875bc30 367 Gene3D G3DSA:3.90.1150.10 24 355 4.4E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1933 3eb2712dd65ab14b54aad9c95875bc30 367 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 364 54.69 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ABED_1933 3eb2712dd65ab14b54aad9c95875bc30 367 Pfam PF00155 Aminotransferase class I and II 31 356 6.8E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABED_1933 3eb2712dd65ab14b54aad9c95875bc30 367 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 363 1.9E-103 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ABED_1933 3eb2712dd65ab14b54aad9c95875bc30 367 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ABED_1933 3eb2712dd65ab14b54aad9c95875bc30 367 SUPERFAMILY SSF53383 13 364 1.77E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1933 3eb2712dd65ab14b54aad9c95875bc30 367 Gene3D G3DSA:3.40.640.10 45 271 4.4E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_2031 143a33b055e17864f4e242610b2e9eab 280 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 1.6E-41 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABED_2031 143a33b055e17864f4e242610b2e9eab 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 1.0E-110 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 ABED_2031 143a33b055e17864f4e242610b2e9eab 280 SUPERFAMILY SSF51658 1 279 2.88E-101 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily ABED_2031 143a33b055e17864f4e242610b2e9eab 280 Gene3D G3DSA:3.20.20.150 1 279 1.4E-111 T 14-10-2018 ABED_2031 143a33b055e17864f4e242610b2e9eab 280 SMART SM00518 3 279 1.7E-125 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 ABED_2031 143a33b055e17864f4e242610b2e9eab 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 42.386 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 ABED_2031 143a33b055e17864f4e242610b2e9eab 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 ABED_2031 143a33b055e17864f4e242610b2e9eab 280 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 ABED_2031 143a33b055e17864f4e242610b2e9eab 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 ABED_1362 906a2a136c99da87d8fe115e03f0473b 538 Gene3D G3DSA:1.20.1530.20 2 382 3.6E-73 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily ABED_1362 906a2a136c99da87d8fe115e03f0473b 538 Gene3D G3DSA:3.40.50.720 397 538 3.1E-20 T 14-10-2018 ABED_1362 906a2a136c99da87d8fe115e03f0473b 538 SUPERFAMILY SSF51735 399 529 5.42E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1362 906a2a136c99da87d8fe115e03f0473b 538 Pfam PF02254 TrkA-N domain 402 515 3.2E-16 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABED_1362 906a2a136c99da87d8fe115e03f0473b 538 Pfam PF00999 Sodium/hydrogen exchanger family 9 373 1.3E-54 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABED_1867 f4b95bf4e7cdd080fc007b3ac9e4b5a7 174 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 172 1.2E-34 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 ABED_1867 f4b95bf4e7cdd080fc007b3ac9e4b5a7 174 SUPERFAMILY SSF55620 1 172 1.06E-26 T 14-10-2018 ABED_1867 f4b95bf4e7cdd080fc007b3ac9e4b5a7 174 Gene3D G3DSA:3.30.479.10 1 174 1.5E-53 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SUPERFAMILY SSF52172 12 146 9.82E-34 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SUPERFAMILY SSF55785 162 257 1.01E-20 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0428 f7c695fe91deaa557831864b3916e2da 608 Pfam PF00072 Response regulator receiver domain 17 123 2.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0428 f7c695fe91deaa557831864b3916e2da 608 Gene3D G3DSA:3.30.450.20 279 398 1.1E-24 T 14-10-2018 ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SMART SM00448 14 125 5.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SMART SM00471 424 561 8.7E-9 T 14-10-2018 IPR003607 HD/PDEase domain ABED_0428 f7c695fe91deaa557831864b3916e2da 608 Gene3D G3DSA:3.30.450.20 148 278 2.9E-24 T 14-10-2018 ABED_0428 f7c695fe91deaa557831864b3916e2da 608 Gene3D G3DSA:3.40.50.2300 10 147 1.1E-32 T 14-10-2018 ABED_0428 f7c695fe91deaa557831864b3916e2da 608 Gene3D G3DSA:1.10.3210.10 403 605 2.1E-76 T 14-10-2018 ABED_0428 f7c695fe91deaa557831864b3916e2da 608 Pfam PF01966 HD domain 429 551 2.5E-18 T 14-10-2018 IPR006674 HD domain ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SUPERFAMILY SSF55785 296 396 2.9E-21 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0428 f7c695fe91deaa557831864b3916e2da 608 Pfam PF13426 PAS domain 297 398 2.2E-18 T 14-10-2018 IPR000014 PAS domain ABED_0428 f7c695fe91deaa557831864b3916e2da 608 Pfam PF13426 PAS domain 161 259 1.0E-13 T 14-10-2018 IPR000014 PAS domain ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SMART SM00091 286 352 0.001 T 14-10-2018 IPR000014 PAS domain ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SMART SM00091 143 211 5.2 T 14-10-2018 IPR000014 PAS domain ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SMART SM00086 218 260 0.26 T 14-10-2018 IPR001610 PAC motif ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SMART SM00086 357 399 3.3E-5 T 14-10-2018 IPR001610 PAC motif ABED_0428 f7c695fe91deaa557831864b3916e2da 608 SUPERFAMILY SSF109604 402 592 1.66E-43 T 14-10-2018 ABED_0428 f7c695fe91deaa557831864b3916e2da 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 405 7.8E-19 T 14-10-2018 IPR000014 PAS domain ABED_0428 f7c695fe91deaa557831864b3916e2da 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 156 264 2.9E-18 T 14-10-2018 IPR000014 PAS domain ABED_1776 00c1ba0958c12325845688982bf51bf8 123 SMART SM00448 1 117 3.4E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1776 00c1ba0958c12325845688982bf51bf8 123 SUPERFAMILY SSF52172 1 122 1.71E-36 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1776 00c1ba0958c12325845688982bf51bf8 123 Gene3D G3DSA:3.40.50.12740 1 123 8.7E-38 T 14-10-2018 ABED_1776 00c1ba0958c12325845688982bf51bf8 123 Pfam PF00072 Response regulator receiver domain 3 117 3.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 8.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 8.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 468 8.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 SUPERFAMILY SSF55874 361 518 1.44E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 Gene3D G3DSA:3.30.565.10 358 520 1.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 518 3.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 SUPERFAMILY SSF47384 283 350 1.8E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 Gene3D G3DSA:1.10.287.130 277 355 4.7E-9 T 14-10-2018 ABED_1401 c4bbe472e7699e81bf068d66ca05a3d6 523 SMART SM00387 398 520 2.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0400 3af0028f8db3b3d2169530e2502ccdbd 395 Pfam PF13742 OB-fold nucleic acid binding domain 5 98 4.5E-30 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 ABED_0400 3af0028f8db3b3d2169530e2502ccdbd 395 Pfam PF02601 Exonuclease VII, large subunit 121 351 1.3E-68 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 ABED_0400 3af0028f8db3b3d2169530e2502ccdbd 395 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 390 26.182 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ABED_0400 3af0028f8db3b3d2169530e2502ccdbd 395 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 387 1.6E-132 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 SUPERFAMILY SSF51735 164 412 8.07E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 Pfam PF00390 Malic enzyme, N-terminal domain 21 151 7.6E-29 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 PIRSF PIRSF000106 6 117 6.2E-10 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 PIRSF PIRSF000106 109 418 1.8E-59 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 Gene3D G3DSA:3.40.50.10380 1 161 1.8E-69 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 Gene3D G3DSA:3.40.50.720 162 419 1.2E-79 T 14-10-2018 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 SUPERFAMILY SSF53223 10 162 1.01E-51 T 14-10-2018 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 SMART SM01274 19 152 1.3E-79 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 SMART SM00919 164 396 6.1E-116 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ABED_1025 19e5fa81fd310d67da60d0c8258dbb96 419 Pfam PF03949 Malic enzyme, NAD binding domain 166 355 3.2E-21 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ABED_1346 9270ab06ec72d8d4a878cd20b26cd930 236 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 2.6E-73 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1346 9270ab06ec72d8d4a878cd20b26cd930 236 Gene3D G3DSA:1.10.10.200 21 77 4.8E-23 T 14-10-2018 IPR017856 Integrase-like, N-terminal ABED_1346 9270ab06ec72d8d4a878cd20b26cd930 236 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 236 25.669 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1346 9270ab06ec72d8d4a878cd20b26cd930 236 Gene3D G3DSA:3.30.70.980 82 234 1.7E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1346 9270ab06ec72d8d4a878cd20b26cd930 236 Pfam PF01709 Transcriptional regulator 5 235 2.3E-73 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1346 9270ab06ec72d8d4a878cd20b26cd930 236 SUPERFAMILY SSF75625 1 235 9.16E-73 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1346 9270ab06ec72d8d4a878cd20b26cd930 236 Gene3D G3DSA:3.30.70.980 131 201 1.7E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1209 1d6f7d7a11c8917b22b2cbc6c43c5b12 405 SUPERFAMILY SSF53686 10 395 3.01E-134 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABED_1209 1d6f7d7a11c8917b22b2cbc6c43c5b12 405 PIRSF PIRSF001413 1 402 3.3E-154 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1209 1d6f7d7a11c8917b22b2cbc6c43c5b12 405 Gene3D G3DSA:3.40.50.1100 61 391 1.8E-165 T 14-10-2018 ABED_1209 1d6f7d7a11c8917b22b2cbc6c43c5b12 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 47.973 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1209 1d6f7d7a11c8917b22b2cbc6c43c5b12 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 385 1.1E-40 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABED_1209 1d6f7d7a11c8917b22b2cbc6c43c5b12 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 396 2.1E-162 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1209 1d6f7d7a11c8917b22b2cbc6c43c5b12 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABED_1209 1d6f7d7a11c8917b22b2cbc6c43c5b12 405 Gene3D G3DSA:3.40.50.1100 17 213 1.8E-165 T 14-10-2018 ABED_1782 ccd8700d912f021277adf5185d244720 75 SUPERFAMILY SSF54565 1 74 8.5E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1782 ccd8700d912f021277adf5185d244720 75 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 75 21.275 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1782 ccd8700d912f021277adf5185d244720 75 Pfam PF00886 Ribosomal protein S16 8 66 1.4E-24 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1782 ccd8700d912f021277adf5185d244720 75 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 74 2.1E-28 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1782 ccd8700d912f021277adf5185d244720 75 Gene3D G3DSA:3.30.1320.10 1 75 4.0E-29 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1782 ccd8700d912f021277adf5185d244720 75 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1121 66cc0cbed9f8d6058df928720cf474e5 114 SUPERFAMILY SSF53800 2 111 1.44E-25 T 14-10-2018 ABED_1121 66cc0cbed9f8d6058df928720cf474e5 114 Pfam PF01903 CbiX 9 110 9.9E-24 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 ABED_1121 66cc0cbed9f8d6058df928720cf474e5 114 Gene3D G3DSA:3.40.50.1400 1 114 1.0E-25 T 14-10-2018 ABED_0347 c35bde1f597cb845a4eb67db26a2ae1a 345 Gene3D G3DSA:3.10.310.30 276 343 1.1E-9 T 14-10-2018 ABED_0347 c35bde1f597cb845a4eb67db26a2ae1a 345 SUPERFAMILY SSF64182 6 328 1.09E-13 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily ABED_0707 47a476e12be3b32fb34a02bca2d7e41f 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 1.3E-14 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0707 47a476e12be3b32fb34a02bca2d7e41f 63 Pfam PF00831 Ribosomal L29 protein 5 58 1.3E-12 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0707 47a476e12be3b32fb34a02bca2d7e41f 63 SUPERFAMILY SSF46561 1 59 3.14E-13 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0707 47a476e12be3b32fb34a02bca2d7e41f 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 14.431 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0707 47a476e12be3b32fb34a02bca2d7e41f 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0707 47a476e12be3b32fb34a02bca2d7e41f 63 Gene3D G3DSA:1.10.287.310 1 63 1.7E-14 T 14-10-2018 ABED_0262 d01d4f924f989686b6ec05332a7d7499 391 SUPERFAMILY SSF54506 184 388 8.47E-73 T 14-10-2018 ABED_0262 d01d4f924f989686b6ec05332a7d7499 391 SUPERFAMILY SSF54506 2 179 5.73E-64 T 14-10-2018 ABED_0262 d01d4f924f989686b6ec05332a7d7499 391 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 389 9.7E-190 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 ABED_0262 d01d4f924f989686b6ec05332a7d7499 391 Pfam PF04303 PrpF protein 6 386 3.9E-157 T 14-10-2018 IPR007400 PrpF protein ABED_0262 d01d4f924f989686b6ec05332a7d7499 391 Gene3D G3DSA:3.10.310.10 11 383 3.2E-139 T 14-10-2018 ABED_0262 d01d4f924f989686b6ec05332a7d7499 391 Gene3D G3DSA:3.10.310.10 179 369 3.2E-139 T 14-10-2018 ABED_0674 38244d1df5fbd5ce189703994a84bc60 771 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 166 1.5E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_0674 38244d1df5fbd5ce189703994a84bc60 771 Pfam PF00593 TonB dependent receptor 248 770 6.6E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_0674 38244d1df5fbd5ce189703994a84bc60 771 Gene3D G3DSA:2.170.130.10 52 182 1.8E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_0674 38244d1df5fbd5ce189703994a84bc60 771 Gene3D G3DSA:2.40.170.20 184 771 4.1E-111 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_0674 38244d1df5fbd5ce189703994a84bc60 771 SUPERFAMILY SSF56935 31 771 8.18E-111 T 14-10-2018 ABED_1749 35c577a8767a018d6d29b19eb069ac72 435 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 434 6.3E-175 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1749 35c577a8767a018d6d29b19eb069ac72 435 SUPERFAMILY SSF52540 92 360 2.83E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1749 35c577a8767a018d6d29b19eb069ac72 435 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 354 3.0E-71 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABED_1749 35c577a8767a018d6d29b19eb069ac72 435 Gene3D G3DSA:3.40.50.12240 15 435 7.6E-138 T 14-10-2018 ABED_1749 35c577a8767a018d6d29b19eb069ac72 435 SMART SM00382 158 338 9.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0170 12b0d2c431c691c14317d62de7ab9b20 117 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 107 3.0E-14 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like ABED_0170 12b0d2c431c691c14317d62de7ab9b20 117 SUPERFAMILY SSF110857 5 108 3.01E-18 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily ABED_0170 12b0d2c431c691c14317d62de7ab9b20 117 Gene3D G3DSA:3.10.490.10 2 117 3.3E-17 T 14-10-2018 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 117 137 2.2E-60 T 14-10-2018 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 164 185 2.2E-60 T 14-10-2018 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 89 114 2.2E-60 T 14-10-2018 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 253 279 2.2E-60 T 14-10-2018 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 321 333 2.2E-60 T 14-10-2018 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 2.2E-60 T 14-10-2018 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 231 252 2.2E-60 T 14-10-2018 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 422 444 2.5E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 65 89 2.5E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 91 111 2.5E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 271 293 2.5E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 Pfam PF00361 Proton-conducting membrane transporter 140 430 2.3E-81 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 72 128 4.3E-22 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0287 a5998f31a307d3baa0eea8c78907aea0 628 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 621 1.4E-194 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0524 f4863c4a6cb2b028c169813e5fdfaeb2 309 Pfam PF00762 Ferrochelatase 5 308 1.7E-92 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABED_0524 f4863c4a6cb2b028c169813e5fdfaeb2 309 Gene3D G3DSA:3.40.50.1400 5 309 1.7E-86 T 14-10-2018 ABED_0524 f4863c4a6cb2b028c169813e5fdfaeb2 309 SUPERFAMILY SSF53800 3 308 9.81E-78 T 14-10-2018 ABED_0524 f4863c4a6cb2b028c169813e5fdfaeb2 309 ProSitePatterns PS00534 Ferrochelatase signature. 181 199 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABED_0524 f4863c4a6cb2b028c169813e5fdfaeb2 309 TIGRFAM TIGR00109 hemH: ferrochelatase 2 309 2.3E-90 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABED_0524 f4863c4a6cb2b028c169813e5fdfaeb2 309 Hamap MF_00323 Ferrochelatase [hemH]. 4 309 30.226 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABED_0524 f4863c4a6cb2b028c169813e5fdfaeb2 309 Gene3D G3DSA:3.40.50.1400 156 293 1.7E-86 T 14-10-2018 ABED_0582 3074e1a854ac6f548e9d6f03ce21b6d4 713 Gene3D G3DSA:2.170.130.10 29 152 2.6E-12 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_0582 3074e1a854ac6f548e9d6f03ce21b6d4 713 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 49 713 2.0E-195 T 14-10-2018 IPR010100 TonB-dependent copper receptor ABED_0582 3074e1a854ac6f548e9d6f03ce21b6d4 713 Gene3D G3DSA:2.40.170.20 167 713 3.0E-65 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_0582 3074e1a854ac6f548e9d6f03ce21b6d4 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 148 1.1E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_0582 3074e1a854ac6f548e9d6f03ce21b6d4 713 Pfam PF00593 TonB dependent receptor 203 710 7.3E-38 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_0582 3074e1a854ac6f548e9d6f03ce21b6d4 713 SUPERFAMILY SSF56935 44 713 8.25E-83 T 14-10-2018 ABED_1119 0ec38073c8bdabf321ebfbdeed663903 384 SUPERFAMILY SSF103473 7 383 1.31E-56 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_1119 0ec38073c8bdabf321ebfbdeed663903 384 Pfam PF07690 Major Facilitator Superfamily 15 350 5.7E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_1119 0ec38073c8bdabf321ebfbdeed663903 384 Gene3D G3DSA:1.20.1250.20 2 192 1.9E-26 T 14-10-2018 ABED_1119 0ec38073c8bdabf321ebfbdeed663903 384 Gene3D G3DSA:1.20.1250.20 196 384 1.8E-19 T 14-10-2018 ABED_1420 cdeb9b36f1c032d86c00168de541ea37 136 SUPERFAMILY SSF81901 33 125 9.94E-28 T 14-10-2018 ABED_1420 cdeb9b36f1c032d86c00168de541ea37 136 Gene3D G3DSA:1.25.40.10 20 133 6.7E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1420 cdeb9b36f1c032d86c00168de541ea37 136 SMART SM00671 46 81 7.3E-6 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1420 cdeb9b36f1c032d86c00168de541ea37 136 SMART SM00671 82 117 1.1E-13 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1420 cdeb9b36f1c032d86c00168de541ea37 136 Pfam PF08238 Sel1 repeat 53 81 2.2E-5 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1420 cdeb9b36f1c032d86c00168de541ea37 136 Pfam PF08238 Sel1 repeat 82 117 8.5E-12 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1863 5e1a015597de42110ecce37542c38a46 419 SUPERFAMILY SSF53901 1 256 8.16E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 ABED_1863 5e1a015597de42110ecce37542c38a46 419 Gene3D G3DSA:3.40.47.10 1 259 2.3E-79 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 ABED_1863 5e1a015597de42110ecce37542c38a46 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 415 2.5E-170 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ABED_1863 5e1a015597de42110ecce37542c38a46 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 251 5.7E-50 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ABED_1863 5e1a015597de42110ecce37542c38a46 419 SUPERFAMILY SSF53901 220 417 4.66E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 ABED_1863 5e1a015597de42110ecce37542c38a46 419 PIRSF PIRSF000447 1 419 3.9E-151 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ABED_1863 5e1a015597de42110ecce37542c38a46 419 SMART SM00825 Beta-ketoacyl synthase 4 419 1.3E-12 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ABED_1863 5e1a015597de42110ecce37542c38a46 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 374 5.1E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal ABED_1863 5e1a015597de42110ecce37542c38a46 419 Gene3D G3DSA:3.40.47.10 261 406 1.1E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 ABED_0927 2bf3f2c141018398aecb0ee6e87089d7 200 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 197 26.233 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ABED_0927 2bf3f2c141018398aecb0ee6e87089d7 200 Pfam PF01926 50S ribosome-binding GTPase 25 151 2.7E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_0927 2bf3f2c141018398aecb0ee6e87089d7 200 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 6 171 4.6E-50 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ABED_0927 2bf3f2c141018398aecb0ee6e87089d7 200 Gene3D G3DSA:3.40.50.300 1 198 7.0E-43 T 14-10-2018 ABED_0927 2bf3f2c141018398aecb0ee6e87089d7 200 SUPERFAMILY SSF52540 9 195 1.51E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0842 9d2d2428d79dbb15b5aef918083ccef2 183 SUPERFAMILY SSF52833 1 180 1.31E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_0842 9d2d2428d79dbb15b5aef918083ccef2 183 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABED_0842 9d2d2428d79dbb15b5aef918083ccef2 183 Gene3D G3DSA:3.40.30.10 18 183 1.6E-38 T 14-10-2018 ABED_0842 9d2d2428d79dbb15b5aef918083ccef2 183 Pfam PF13905 Thioredoxin-like 67 160 3.6E-17 T 14-10-2018 IPR012336 Thioredoxin-like fold ABED_0770 d2392862ffae0def329520001498b523 134 SUPERFAMILY SSF55785 11 101 2.62E-24 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0770 d2392862ffae0def329520001498b523 134 Pfam PF08447 PAS fold 23 102 5.8E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_0770 d2392862ffae0def329520001498b523 134 Gene3D G3DSA:3.30.450.20 6 134 2.9E-22 T 14-10-2018 ABED_0770 d2392862ffae0def329520001498b523 134 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 106 4.3E-11 T 14-10-2018 IPR000014 PAS domain ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 Pfam PF02867 Ribonucleotide reductase, barrel domain 221 771 6.4E-166 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 146 775 2.1E-187 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 SUPERFAMILY SSF48168 8 219 1.57E-62 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 SUPERFAMILY SSF51998 220 776 9.84E-176 T 14-10-2018 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 644 666 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 143 217 4.9E-24 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 PRINTS PR01183 Ribonucleotide reductase large chain signature 296 315 2.9E-43 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 PRINTS PR01183 Ribonucleotide reductase large chain signature 581 604 2.9E-43 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 PRINTS PR01183 Ribonucleotide reductase large chain signature 655 682 2.9E-43 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 PRINTS PR01183 Ribonucleotide reductase large chain signature 427 438 2.9E-43 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 PRINTS PR01183 Ribonucleotide reductase large chain signature 515 538 2.9E-43 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 PRINTS PR01183 Ribonucleotide reductase large chain signature 553 575 2.9E-43 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0020 c09bd4377dcdfa81f103f7b4e8173a29 794 Pfam PF03477 ATP cone domain 3 89 4.9E-14 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ABED_2086 c2f2ca2fd8a43d9b3dcfa44abb8bd363 360 SUPERFAMILY SSF103473 3 359 1.24E-20 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_2086 c2f2ca2fd8a43d9b3dcfa44abb8bd363 360 Pfam PF12832 MFS_1 like family 4 337 2.7E-33 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain ABED_2086 c2f2ca2fd8a43d9b3dcfa44abb8bd363 360 Gene3D G3DSA:1.20.1250.20 180 360 3.9E-21 T 14-10-2018 ABED_2086 c2f2ca2fd8a43d9b3dcfa44abb8bd363 360 Gene3D G3DSA:1.20.1250.20 2 176 3.0E-10 T 14-10-2018 ABED_0380 ba908666fa9d47cd7c43f504cbff893b 706 Pfam PF04851 Type III restriction enzyme, res subunit 369 510 4.1E-20 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABED_0380 ba908666fa9d47cd7c43f504cbff893b 706 Pfam PF00271 Helicase conserved C-terminal domain 568 673 1.6E-14 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0380 ba908666fa9d47cd7c43f504cbff893b 706 SMART SM00487 367 541 5.5E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_0380 ba908666fa9d47cd7c43f504cbff893b 706 Gene3D G3DSA:3.40.50.300 360 535 4.8E-34 T 14-10-2018 ABED_0380 ba908666fa9d47cd7c43f504cbff893b 706 SMART SM00490 593 673 2.8E-10 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0380 ba908666fa9d47cd7c43f504cbff893b 706 SUPERFAMILY SSF52540 412 687 7.09E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0380 ba908666fa9d47cd7c43f504cbff893b 706 Gene3D G3DSA:3.40.50.300 536 706 1.9E-31 T 14-10-2018 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 427 6.4E-156 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 ProSitePatterns PS00480 Citrate synthase signature. 314 326 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 Pfam PF00285 Citrate synthase, C-terminal domain 48 422 7.4E-123 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 Gene3D G3DSA:2.20.28.60 3 52 4.8E-16 T 14-10-2018 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 PIRSF PIRSF001369 40 428 1.7E-139 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 SUPERFAMILY SSF48256 7 427 6.54E-143 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 Gene3D G3DSA:1.10.230.10 279 387 1.2E-126 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 Gene3D G3DSA:1.10.580.10 59 422 1.2E-126 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 PRINTS PR00143 Citrate synthase signature 390 404 6.1E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 PRINTS PR00143 Citrate synthase signature 230 245 6.1E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 PRINTS PR00143 Citrate synthase signature 370 386 6.1E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 PRINTS PR00143 Citrate synthase signature 307 327 6.1E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 PRINTS PR00143 Citrate synthase signature 167 180 6.1E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0293 101ca13c5f7f98215884333eef1c7b63 428 PRINTS PR00143 Citrate synthase signature 252 280 6.1E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 ABED_0335 d7149acb45399a92dc81478709b5c6b2 181 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 156 7.9E-32 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ ABED_1886 3a7805a3ce3a5e33609218617754ad89 221 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 220 3.0E-83 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO ABED_1886 3a7805a3ce3a5e33609218617754ad89 221 Gene3D G3DSA:1.10.760.10 37 194 1.1E-47 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1886 3a7805a3ce3a5e33609218617754ad89 221 SUPERFAMILY SSF46626 13 221 4.72E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1886 3a7805a3ce3a5e33609218617754ad89 221 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 220 3.0E-83 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 Gene3D G3DSA:1.25.40.20 4 148 1.9E-33 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 Pfam PF13637 Ankyrin repeats (many copies) 88 130 3.5E-9 T 14-10-2018 ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 PRINTS PR01415 Ankyrin repeat signature 93 107 2.9E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 PRINTS PR01415 Ankyrin repeat signature 45 60 2.9E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 SUPERFAMILY SSF48403 19 141 5.13E-32 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 SMART SM00248 110 139 33.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 SMART SM00248 44 73 6.6E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 SMART SM00248 77 106 0.0019 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_1441 7b145210d4997da386c4b2c0f6543dd4 156 Pfam PF12796 Ankyrin repeats (3 copies) 20 75 2.3E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain ABED_0738 59aeda8c67a84a9da686496a0297383b 665 SMART SM00283 367 616 8.7E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0738 59aeda8c67a84a9da686496a0297383b 665 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 183 9.3E-34 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABED_0738 59aeda8c67a84a9da686496a0297383b 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 580 1.5E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0738 59aeda8c67a84a9da686496a0297383b 665 Gene3D G3DSA:1.10.287.950 315 610 9.9E-58 T 14-10-2018 ABED_0738 59aeda8c67a84a9da686496a0297383b 665 SUPERFAMILY SSF58104 241 604 8.76E-55 T 14-10-2018 ABED_0805 11b144170409924cd8cda205922d38b5 432 Pfam PF01420 Type I restriction modification DNA specificity domain 15 203 6.5E-19 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ABED_0805 11b144170409924cd8cda205922d38b5 432 Pfam PF01420 Type I restriction modification DNA specificity domain 224 404 4.6E-17 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ABED_0805 11b144170409924cd8cda205922d38b5 432 Gene3D G3DSA:1.10.287.1120 170 422 7.0E-85 T 14-10-2018 ABED_0805 11b144170409924cd8cda205922d38b5 432 Gene3D G3DSA:3.90.220.20 12 426 7.0E-85 T 14-10-2018 ABED_0805 11b144170409924cd8cda205922d38b5 432 Gene3D G3DSA:3.90.220.20 226 379 7.0E-85 T 14-10-2018 ABED_0805 11b144170409924cd8cda205922d38b5 432 SUPERFAMILY SSF116734 5 223 6.05E-45 T 14-10-2018 ABED_0805 11b144170409924cd8cda205922d38b5 432 SUPERFAMILY SSF116734 217 428 2.45E-39 T 14-10-2018 ABED_1261 93d7e81060e217b8b66cd7cfb1cce623 362 Pfam PF13102 Phage integrase SAM-like domain 106 174 1.0E-4 T 14-10-2018 IPR025269 Phage integrase SAM-like domain ABED_1261 93d7e81060e217b8b66cd7cfb1cce623 362 Gene3D G3DSA:1.10.150.130 79 188 6.0E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal ABED_1261 93d7e81060e217b8b66cd7cfb1cce623 362 SUPERFAMILY SSF56349 83 357 1.8E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABED_1261 93d7e81060e217b8b66cd7cfb1cce623 362 Gene3D G3DSA:1.10.443.10 189 359 1.8E-32 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABED_1261 93d7e81060e217b8b66cd7cfb1cce623 362 Pfam PF00589 Phage integrase family 190 349 7.5E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 Pfam PF00909 Ammonium Transporter Family 32 436 2.5E-110 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 ProSitePatterns PS01219 Ammonium transporters signature. 189 214 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 TIGRFAM TIGR00836 amt: ammonium transporter 30 435 2.4E-125 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 SUPERFAMILY SSF111352 26 412 4.71E-115 T 14-10-2018 ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 Gene3D G3DSA:1.10.3430.10 9 439 1.5E-129 T 14-10-2018 IPR029020 Ammonium/urea transporter ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 PRINTS PR00342 Rhesus blood group protein signature 133 149 1.4E-9 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 PRINTS PR00342 Rhesus blood group protein signature 259 281 1.4E-9 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 PRINTS PR00342 Rhesus blood group protein signature 228 246 1.4E-9 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABED_1092 2b3bbab1084117c7cb55da58fc27f3b7 439 PRINTS PR00342 Rhesus blood group protein signature 314 332 1.4E-9 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 578 3.1E-195 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PIRSF PIRSF001336 1 602 3.5E-194 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01180 Arginine decarboxylase signature 306 323 1.4E-43 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01180 Arginine decarboxylase signature 515 536 1.4E-43 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01180 Arginine decarboxylase signature 441 462 1.4E-43 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01180 Arginine decarboxylase signature 131 146 1.4E-43 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01180 Arginine decarboxylase signature 52 67 1.4E-43 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01180 Arginine decarboxylase signature 182 204 1.4E-43 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01180 Arginine decarboxylase signature 76 90 1.4E-43 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01180 Arginine decarboxylase signature 466 491 1.4E-43 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 Gene3D G3DSA:3.20.20.10 53 328 8.2E-184 T 14-10-2018 IPR029066 PLP-binding barrel ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 Gene3D G3DSA:2.40.37.10 5 540 8.2E-184 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 SUPERFAMILY SSF51419 58 326 5.45E-45 T 14-10-2018 IPR029066 PLP-binding barrel ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 84 102 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 72 326 1.3E-30 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 84 102 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 108 120 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 515 528 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 225 238 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 316 335 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 Gene3D G3DSA:1.20.58.930 343 434 8.2E-184 T 14-10-2018 ABED_0910 7b2597194cfbc53b66d024a6b2c75523 603 SUPERFAMILY SSF50621 428 542 1.07E-13 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABED_0472 c3f888e71b48a875a9baa70162a4fbe1 202 Pfam PF00929 Exonuclease 33 195 7.2E-26 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_0472 c3f888e71b48a875a9baa70162a4fbe1 202 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 28 196 5.4E-25 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABED_0472 c3f888e71b48a875a9baa70162a4fbe1 202 Gene3D G3DSA:3.30.420.10 24 201 1.1E-38 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_0472 c3f888e71b48a875a9baa70162a4fbe1 202 SMART SM00479 31 202 9.0E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABED_0472 c3f888e71b48a875a9baa70162a4fbe1 202 SUPERFAMILY SSF53098 31 200 1.75E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 5 349 7.7E-121 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 341 8.1E-117 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 203 221 4.4E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 4.4E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 223 240 4.4E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 267 282 4.4E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 297 318 4.4E-42 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 SUPERFAMILY SSF160544 239 346 5.76E-41 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ABED_1751 467ecb58ceab8cc9204cc177e0f67b3a 349 Gene3D G3DSA:3.40.1690.10 212 349 1.7E-57 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ABED_1788 84802fd27600a39e6461b62486d58b4c 293 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 287 4.0E-154 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 284 6.0E-142 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 Gene3D G3DSA:3.30.930.10 1 209 4.0E-107 T 14-10-2018 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 Gene3D G3DSA:1.20.58.180 210 288 4.1E-33 T 14-10-2018 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 SUPERFAMILY SSF55681 3 284 1.24E-126 T 14-10-2018 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 9.8E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 9.8E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 9.8E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 9.8E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 9.8E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 9.8E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1788 84802fd27600a39e6461b62486d58b4c 293 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 286 57.711 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 Pfam PF08238 Sel1 repeat 72 92 0.53 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 Pfam PF08238 Sel1 repeat 96 128 1.2E-9 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 Pfam PF08238 Sel1 repeat 130 164 2.0E-13 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 Pfam PF08238 Sel1 repeat 29 53 0.028 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 SUPERFAMILY SSF81901 26 170 5.1E-43 T 14-10-2018 ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 SMART SM00671 129 164 2.8E-13 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 SMART SM00671 15 53 150.0 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 SMART SM00671 93 128 2.2E-9 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 SMART SM00671 54 92 0.0023 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1037 e6b14addfab4a7001ae6dff3facdf36d 180 Gene3D G3DSA:1.25.40.10 16 180 2.2E-49 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0366 a2f8d7821cb54dbbc5307a516aa542eb 146 Pfam PF11220 Protein of unknown function (DUF3015) 21 145 9.6E-41 T 14-10-2018 IPR021383 Protein of unknown function DUF3015 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 Gene3D G3DSA:3.40.120.10 256 369 1.1E-19 T 14-10-2018 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 Gene3D G3DSA:3.30.310.50 371 466 1.4E-17 T 14-10-2018 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 213 226 4.8E-17 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 4.8E-17 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 256 4.8E-17 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 104 118 4.8E-17 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 SUPERFAMILY SSF53738 162 262 1.1E-22 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 164 259 6.3E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 Gene3D G3DSA:3.40.120.10 1 150 1.7E-37 T 14-10-2018 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 SUPERFAMILY SSF53738 267 355 3.57E-17 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 265 360 9.6E-11 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 SUPERFAMILY SSF53738 2 186 2.0E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 SUPERFAMILY SSF55957 368 464 2.44E-11 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 457 1.9E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 Gene3D G3DSA:3.40.120.10 182 255 1.5E-22 T 14-10-2018 ABED_1601 326860700faeda2d4ff3ed7cfad70b95 469 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 133 1.8E-22 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0375 5aa81ff1749eb3e01c75b0d294a766a5 252 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 210 3.5E-16 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 Hamap MF_00235 Adenylate kinase [adk]. 3 186 32.625 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 SUPERFAMILY SSF52540 3 188 2.56E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 PRINTS PR00094 Adenylate kinase signature 150 164 3.2E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 PRINTS PR00094 Adenylate kinase signature 83 99 3.2E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 PRINTS PR00094 Adenylate kinase signature 133 148 3.2E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 PRINTS PR00094 Adenylate kinase signature 35 49 3.2E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 PRINTS PR00094 Adenylate kinase signature 6 19 3.2E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 Pfam PF00406 Adenylate kinase 7 163 1.7E-34 T 14-10-2018 ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 Gene3D G3DSA:3.40.50.300 1 187 1.3E-47 T 14-10-2018 ABED_0727 7c1bd4c94bcfd19bebab6617ae99f9df 189 ProSitePatterns PS00113 Adenylate kinase signature. 83 94 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Gene3D G3DSA:3.30.70.1320 135 324 4.0E-233 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Gene3D G3DSA:3.30.2090.10 179 269 4.0E-233 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1029 2.3E-301 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Gene3D G3DSA:1.20.1640.10 504 1020 4.0E-233 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 SUPERFAMILY SSF82693 138 322 4.08E-11 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Gene3D G3DSA:3.30.70.1440 655 854 4.0E-233 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Gene3D G3DSA:1.20.1640.10 12 503 4.0E-233 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Gene3D G3DSA:3.30.70.1430 42 804 4.0E-233 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Pfam PF00873 AcrB/AcrD/AcrF family 5 1023 1.4E-211 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 SUPERFAMILY SSF82714 710 781 4.32E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 SUPERFAMILY SSF82866 291 493 4.05E-41 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 SUPERFAMILY SSF82866 793 1028 1.44E-43 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 SUPERFAMILY SSF82693 43 125 8.37E-16 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Gene3D G3DSA:3.30.70.1430 555 654 4.0E-233 T 14-10-2018 ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 Gene3D G3DSA:3.30.2090.10 709 796 4.0E-233 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0065 07fac0fc6f0edda6c098c27ea064e078 1035 SUPERFAMILY SSF82714 185 265 2.22E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 610 23.388 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 Pfam PF01541 GIY-YIG catalytic domain 15 96 6.6E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 Pfam PF02151 UvrB/uvrC motif 204 237 1.1E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 SUPERFAMILY SSF82771 14 103 1.96E-18 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 SMART SM00465 13 101 6.9E-19 T 14-10-2018 IPR000305 GIY-YIG endonuclease ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 547 1.6E-39 T 14-10-2018 IPR001162 UvrC family homology region ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 3 594 3.7E-159 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 SUPERFAMILY SSF47781 535 613 6.35E-14 T 14-10-2018 IPR010994 RuvA domain 2-like ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 Gene3D G3DSA:3.30.420.340 378 554 3.8E-39 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 Gene3D G3DSA:3.40.1440.10 1 105 2.7E-32 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 SUPERFAMILY SSF46600 201 240 3.4E-8 T 14-10-2018 IPR036876 UVR domain superfamily ABED_0735 de16ed70e1b6c574e656fb441b496ce0 616 Gene3D G3DSA:1.10.150.20 555 611 4.9E-10 T 14-10-2018 ABED_0206 433bd1449cccba53a4ebfa0ac07052ea 208 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 173 3.1E-24 T 14-10-2018 ABED_0206 433bd1449cccba53a4ebfa0ac07052ea 208 Pfam PF00702 haloacid dehalogenase-like hydrolase 1 175 1.8E-15 T 14-10-2018 ABED_0206 433bd1449cccba53a4ebfa0ac07052ea 208 SUPERFAMILY SSF56784 1 207 1.6E-49 T 14-10-2018 IPR036412 HAD-like superfamily ABED_0206 433bd1449cccba53a4ebfa0ac07052ea 208 Gene3D G3DSA:3.40.50.1000 1 207 1.0E-62 T 14-10-2018 IPR023214 HAD superfamily ABED_0206 433bd1449cccba53a4ebfa0ac07052ea 208 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 2 204 1.1E-69 T 14-10-2018 ABED_0305 d9dd05d03f94944b8beaee83744c8814 202 Gene3D G3DSA:3.40.190.10 88 171 1.1E-62 T 14-10-2018 ABED_0305 d9dd05d03f94944b8beaee83744c8814 202 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 178 1.5E-55 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ABED_0305 d9dd05d03f94944b8beaee83744c8814 202 Gene3D G3DSA:3.40.190.10 3 192 1.1E-62 T 14-10-2018 ABED_0305 d9dd05d03f94944b8beaee83744c8814 202 SUPERFAMILY SSF53850 1 199 9.12E-59 T 14-10-2018 ABED_0305 d9dd05d03f94944b8beaee83744c8814 202 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 199 45.952 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 ABED_0305 d9dd05d03f94944b8beaee83744c8814 202 Pfam PF01634 ATP phosphoribosyltransferase 47 199 4.4E-48 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ABED_1070 8858dfa2ab287cef894f589145957250 344 Pfam PF01761 3-dehydroquinate synthase 57 310 1.9E-101 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABED_1070 8858dfa2ab287cef894f589145957250 344 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 341 64.148 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABED_1070 8858dfa2ab287cef894f589145957250 344 Gene3D G3DSA:3.40.50.1970 1 162 1.0E-59 T 14-10-2018 ABED_1070 8858dfa2ab287cef894f589145957250 344 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 17 340 1.6E-111 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABED_1070 8858dfa2ab287cef894f589145957250 344 Gene3D G3DSA:1.20.1090.10 163 344 1.5E-59 T 14-10-2018 ABED_1070 8858dfa2ab287cef894f589145957250 344 PIRSF PIRSF001455 4 343 2.2E-103 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABED_1070 8858dfa2ab287cef894f589145957250 344 SUPERFAMILY SSF56796 17 342 6.02E-104 T 14-10-2018 ABED_0042 5eef9fc5fc2cee420f001eef85581df7 516 Gene3D G3DSA:3.40.50.300 206 437 6.6E-56 T 14-10-2018 ABED_0042 5eef9fc5fc2cee420f001eef85581df7 516 Pfam PF00270 DEAD/DEAH box helicase 26 188 1.8E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABED_0042 5eef9fc5fc2cee420f001eef85581df7 516 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABED_0042 5eef9fc5fc2cee420f001eef85581df7 516 SUPERFAMILY SSF52540 68 352 7.11E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0042 5eef9fc5fc2cee420f001eef85581df7 516 SMART SM00490 250 331 1.2E-32 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0042 5eef9fc5fc2cee420f001eef85581df7 516 Pfam PF00271 Helicase conserved C-terminal domain 224 331 1.9E-32 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0042 5eef9fc5fc2cee420f001eef85581df7 516 Gene3D G3DSA:3.40.50.300 1 203 1.3E-70 T 14-10-2018 ABED_0042 5eef9fc5fc2cee420f001eef85581df7 516 SMART SM00487 20 214 5.0E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_0627 f2932a56eb796f3ee5bcfd7701f18b8b 256 SUPERFAMILY SSF51366 1 249 1.73E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABED_0627 f2932a56eb796f3ee5bcfd7701f18b8b 256 Pfam PF00977 Histidine biosynthesis protein 5 231 9.4E-68 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ABED_0627 f2932a56eb796f3ee5bcfd7701f18b8b 256 Gene3D G3DSA:3.20.20.70 1 255 2.5E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0985 7f288d59162b3fad29231dd56275dbec 555 Gene3D G3DSA:2.40.160.50 182 552 6.3E-64 T 14-10-2018 ABED_0985 7f288d59162b3fad29231dd56275dbec 555 Gene3D G3DSA:3.10.20.310 54 145 2.6E-20 T 14-10-2018 ABED_0985 7f288d59162b3fad29231dd56275dbec 555 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 208 498 2.6E-24 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal ABED_0985 7f288d59162b3fad29231dd56275dbec 555 Pfam PF08479 POTRA domain, ShlB-type 70 145 5.9E-14 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type ABED_0888 197e940a08847c08e84b0ac7003f4e09 216 SMART SM00382 29 202 3.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0888 197e940a08847c08e84b0ac7003f4e09 216 Gene3D G3DSA:3.40.50.300 1 215 2.8E-53 T 14-10-2018 ABED_0888 197e940a08847c08e84b0ac7003f4e09 216 SUPERFAMILY SSF52540 5 211 1.0E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0888 197e940a08847c08e84b0ac7003f4e09 216 Pfam PF00005 ABC transporter 21 167 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1366 d14359c0872d37a68baf6acac551d617 237 SUPERFAMILY SSF48150 8 234 4.08E-37 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABED_1366 d14359c0872d37a68baf6acac551d617 237 SMART SM00478 63 209 1.3E-17 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABED_1366 d14359c0872d37a68baf6acac551d617 237 Gene3D G3DSA:1.10.340.30 50 156 3.3E-29 T 14-10-2018 ABED_1366 d14359c0872d37a68baf6acac551d617 237 Gene3D G3DSA:1.10.1670.10 157 234 3.3E-29 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ABED_1366 d14359c0872d37a68baf6acac551d617 237 PIRSF PIRSF001435 37 236 4.4E-38 T 14-10-2018 ABED_1366 d14359c0872d37a68baf6acac551d617 237 PIRSF PIRSF001435 1 28 3.6 T 14-10-2018 ABED_1366 d14359c0872d37a68baf6acac551d617 237 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 60 185 9.6E-10 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABED_0352 c2963c0a2fcf2639221482f485294718 355 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 168 179 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABED_0352 c2963c0a2fcf2639221482f485294718 355 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 97 108 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABED_0352 c2963c0a2fcf2639221482f485294718 355 Gene3D G3DSA:3.20.20.70 1 355 9.8E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0352 c2963c0a2fcf2639221482f485294718 355 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 353 7.5E-89 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABED_0352 c2963c0a2fcf2639221482f485294718 355 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 354 5.6E-168 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 ABED_0352 c2963c0a2fcf2639221482f485294718 355 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 354 1.9E-107 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABED_0352 c2963c0a2fcf2639221482f485294718 355 SUPERFAMILY SSF51569 3 354 1.9E-128 T 14-10-2018 ABED_0352 c2963c0a2fcf2639221482f485294718 355 PIRSF PIRSF001359 12 355 1.7E-89 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABED_0346 33599399f962845d23a7630932269751 132 SUPERFAMILY SSF46785 3 131 1.02E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0346 33599399f962845d23a7630932269751 132 Gene3D G3DSA:1.10.10.10 1 132 5.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0346 33599399f962845d23a7630932269751 132 Pfam PF02082 Transcriptional regulator 1 80 5.3E-22 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type ABED_0346 33599399f962845d23a7630932269751 132 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.5E-34 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type ABED_1497 5961dde9471a03638703f90909751f31 224 SMART SM00358 155 222 8.8E-21 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain ABED_1497 5961dde9471a03638703f90909751f31 224 SMART SM00535 19 148 1.9E-48 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABED_1497 5961dde9471a03638703f90909751f31 224 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 218 29.912 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ABED_1497 5961dde9471a03638703f90909751f31 224 SUPERFAMILY SSF54768 109 221 1.12E-24 T 14-10-2018 ABED_1497 5961dde9471a03638703f90909751f31 224 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 221 2.2E-74 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ABED_1497 5961dde9471a03638703f90909751f31 224 Pfam PF14622 Ribonuclease-III-like 17 139 1.1E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABED_1497 5961dde9471a03638703f90909751f31 224 Pfam PF00035 Double-stranded RNA binding motif 155 221 5.3E-14 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain ABED_1497 5961dde9471a03638703f90909751f31 224 Gene3D G3DSA:3.30.160.20 154 221 3.3E-21 T 14-10-2018 ABED_1497 5961dde9471a03638703f90909751f31 224 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABED_1497 5961dde9471a03638703f90909751f31 224 Gene3D G3DSA:1.10.1520.10 4 146 2.8E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ABED_1497 5961dde9471a03638703f90909751f31 224 SUPERFAMILY SSF69065 4 156 3.31E-48 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ABED_0462 6eb2e156ee7e7cf5b055741eaff1079b 161 SUPERFAMILY SSF55083 30 158 1.96E-36 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABED_0462 6eb2e156ee7e7cf5b055741eaff1079b 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 33 159 1.8E-24 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABED_0462 6eb2e156ee7e7cf5b055741eaff1079b 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 32 158 4.8E-36 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABED_0462 6eb2e156ee7e7cf5b055741eaff1079b 161 Gene3D G3DSA:3.30.70.560 26 161 3.4E-37 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABED_0752 a357736ed9f980eb73577ddc86741156 98 Pfam PF10985 Protein of unknown function (DUF2805) 32 98 1.6E-27 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 ABED_0752 a357736ed9f980eb73577ddc86741156 98 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 31 97 6.7E-27 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 Gene3D G3DSA:1.10.40.30 361 437 2.4E-174 T 14-10-2018 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 TIGRFAM TIGR00838 argH: argininosuccinate lyase 9 459 2.1E-168 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 Pfam PF14698 Argininosuccinate lyase C-terminal 365 435 9.6E-16 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 9.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 9.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 9.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 9.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 458 38.751 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 SUPERFAMILY SSF48557 16 462 5.65E-132 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 Gene3D G3DSA:1.20.200.10 120 453 2.4E-174 T 14-10-2018 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 7.2E-58 T 14-10-2018 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 7.2E-58 T 14-10-2018 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 7.2E-58 T 14-10-2018 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 7.2E-58 T 14-10-2018 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 7.2E-58 T 14-10-2018 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 7.2E-58 T 14-10-2018 ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 Pfam PF00206 Lyase 12 301 2.9E-72 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal ABED_0572 b43b503620d442c0d6b14969f804c2b9 463 Gene3D G3DSA:1.10.275.10 26 230 2.4E-174 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal ABED_1382 d3812fcf625ddd1430fa746138cd5041 125 SUPERFAMILY SSF103247 2 124 1.57E-28 T 14-10-2018 IPR035923 TT1751-like domain superfamily ABED_1382 d3812fcf625ddd1430fa746138cd5041 125 PIRSF PIRSF021774 1 125 1.5E-28 T 14-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 ABED_1382 d3812fcf625ddd1430fa746138cd5041 125 Gene3D G3DSA:3.30.310.70 1 125 5.4E-31 T 14-10-2018 IPR035923 TT1751-like domain superfamily ABED_1382 d3812fcf625ddd1430fa746138cd5041 125 Pfam PF03625 Domain of unknown function DUF302 34 92 7.9E-16 T 14-10-2018 IPR005180 Domain of unknown function DUF302 ABED_1262 98d8bb7207e3f7c824b9bfb690fa9d92 135 Gene3D G3DSA:1.10.10.10 1 135 1.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1262 98d8bb7207e3f7c824b9bfb690fa9d92 135 SUPERFAMILY SSF46785 3 131 4.09E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1262 98d8bb7207e3f7c824b9bfb690fa9d92 135 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 1.6E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type ABED_1262 98d8bb7207e3f7c824b9bfb690fa9d92 135 Pfam PF02082 Transcriptional regulator 1 81 2.0E-20 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type ABED_0909 730f24cb7bab51bda5ab802c487c03c6 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 80 116 4.7E-4 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_0909 730f24cb7bab51bda5ab802c487c03c6 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 158 1.3E-8 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_0909 730f24cb7bab51bda5ab802c487c03c6 244 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABED_0909 730f24cb7bab51bda5ab802c487c03c6 244 PIRSF PIRSF000441 7 233 6.7E-73 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABED_0909 730f24cb7bab51bda5ab802c487c03c6 244 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 13 174 1.4E-70 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABED_0909 730f24cb7bab51bda5ab802c487c03c6 244 SUPERFAMILY SSF51161 6 176 1.3E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_0909 730f24cb7bab51bda5ab802c487c03c6 244 Gene3D G3DSA:1.10.3130.10 3 72 1.6E-16 T 14-10-2018 ABED_0909 730f24cb7bab51bda5ab802c487c03c6 244 Gene3D G3DSA:2.160.10.10 75 196 9.3E-37 T 14-10-2018 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 216 366 1.6E-58 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 Gene3D G3DSA:3.90.550.10 2 205 2.3E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 Pfam PF02542 YgbB family 214 366 6.1E-59 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 200 1.6E-30 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 SUPERFAMILY SSF69765 213 372 1.19E-58 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 Gene3D G3DSA:3.30.1330.50 212 374 7.7E-64 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 213 368 32.574 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 2 369 34.937 T 14-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 247 262 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABED_0118 9576d34a94c5bc0df2e2969b9c96c5b1 374 SUPERFAMILY SSF53448 4 202 2.48E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0926 31bae8dcda3d8f57ff2678347cf6e821 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 17 155 2.6E-22 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ABED_0926 31bae8dcda3d8f57ff2678347cf6e821 164 Pfam PF03968 OstA-like protein 24 136 1.4E-18 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal ABED_0926 31bae8dcda3d8f57ff2678347cf6e821 164 Gene3D G3DSA:2.60.450.10 17 154 1.1E-17 T 14-10-2018 ABED_0341 0506a4e4a9d58c922a41c953969777ac 333 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 31 133 5.3E-12 T 14-10-2018 IPR029095 NarX-like, N-terminal ABED_2108 3099f9e3637678641ec4b6ee278fb13e 348 Gene3D G3DSA:3.40.50.300 2 271 5.3E-79 T 14-10-2018 ABED_2108 3099f9e3637678641ec4b6ee278fb13e 348 SUPERFAMILY SSF50331 242 337 3.23E-5 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABED_2108 3099f9e3637678641ec4b6ee278fb13e 348 Pfam PF00005 ABC transporter 18 167 3.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_2108 3099f9e3637678641ec4b6ee278fb13e 348 SMART SM00382 27 217 3.0E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_2108 3099f9e3637678641ec4b6ee278fb13e 348 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_2108 3099f9e3637678641ec4b6ee278fb13e 348 SUPERFAMILY SSF52540 3 249 1.46E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_2108 3099f9e3637678641ec4b6ee278fb13e 348 Pfam PF12857 TOBE-like domain 281 337 2.3E-10 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 ABED_2108 3099f9e3637678641ec4b6ee278fb13e 348 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 244 1.6E-111 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 ABED_0237 39ef743bae9472785e8a2b51b9274dda 368 Gene3D G3DSA:3.90.1150.10 25 355 5.9E-83 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0237 39ef743bae9472785e8a2b51b9274dda 368 Gene3D G3DSA:3.40.640.10 41 273 5.9E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0237 39ef743bae9472785e8a2b51b9274dda 368 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 222 231 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ABED_0237 39ef743bae9472785e8a2b51b9274dda 368 SUPERFAMILY SSF53383 14 362 2.66E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0237 39ef743bae9472785e8a2b51b9274dda 368 Pfam PF00155 Aminotransferase class I and II 24 342 5.0E-35 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABED_0011 3c4fb6ad35d9a56c9fbfaf9b851196cb 133 SUPERFAMILY SSF50331 38 126 3.77E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABED_0011 3c4fb6ad35d9a56c9fbfaf9b851196cb 133 Gene3D G3DSA:2.40.50.100 53 120 3.1E-14 T 14-10-2018 ABED_0011 3c4fb6ad35d9a56c9fbfaf9b851196cb 133 Pfam PF03459 TOBE domain 68 125 1.8E-6 T 14-10-2018 IPR005116 Transport-associated OB, type 1 ABED_0011 3c4fb6ad35d9a56c9fbfaf9b851196cb 133 Gene3D G3DSA:2.40.50.100 39 125 3.1E-14 T 14-10-2018 ABED_2128 f10a9f09d88b0e8c9c652c65b67c06b9 319 Gene3D G3DSA:3.40.630.10 8 315 1.6E-55 T 14-10-2018 ABED_2128 f10a9f09d88b0e8c9c652c65b67c06b9 319 SUPERFAMILY SSF53187 31 312 5.95E-52 T 14-10-2018 ABED_2128 f10a9f09d88b0e8c9c652c65b67c06b9 319 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 37 310 4.5E-24 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ABED_0699 880f41769f861952bb3ca913248d9fea 191 Gene3D G3DSA:2.40.30.10 113 191 3.1E-6 T 14-10-2018 ABED_0699 880f41769f861952bb3ca913248d9fea 191 SUPERFAMILY SSF50447 2 188 1.77E-41 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABED_0699 880f41769f861952bb3ca913248d9fea 191 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 188 1.3E-45 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0699 880f41769f861952bb3ca913248d9fea 191 Pfam PF00297 Ribosomal protein L3 88 154 4.8E-9 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 Gene3D G3DSA:3.30.160.20 207 293 9.0E-92 T 14-10-2018 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 39.785 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 SUPERFAMILY SSF75620 10 349 4.19E-131 T 14-10-2018 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 Pfam PF00472 RF-1 domain 207 317 1.0E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 351 2.4E-159 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 Pfam PF03462 PCRF domain 11 200 5.0E-70 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 SMART SM00937 61 175 1.3E-64 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABED_0083 04d13d76c530be9e4396783cb5448e1c 355 Gene3D G3DSA:3.30.70.1660 109 332 9.0E-92 T 14-10-2018 ABED_0873 0210dcefee08ce56dcb6d4c0b768bd08 389 Pfam PF00155 Aminotransferase class I and II 31 382 5.7E-70 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABED_0873 0210dcefee08ce56dcb6d4c0b768bd08 389 Gene3D G3DSA:3.90.1150.10 25 382 8.5E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0873 0210dcefee08ce56dcb6d4c0b768bd08 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 1.9E-13 T 14-10-2018 ABED_0873 0210dcefee08ce56dcb6d4c0b768bd08 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 1.9E-13 T 14-10-2018 ABED_0873 0210dcefee08ce56dcb6d4c0b768bd08 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 1.9E-13 T 14-10-2018 ABED_0873 0210dcefee08ce56dcb6d4c0b768bd08 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 1.9E-13 T 14-10-2018 ABED_0873 0210dcefee08ce56dcb6d4c0b768bd08 389 SUPERFAMILY SSF53383 1 387 2.06E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0873 0210dcefee08ce56dcb6d4c0b768bd08 389 Gene3D G3DSA:3.40.640.10 62 285 8.5E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 Gene3D G3DSA:3.30.260.10 135 409 1.5E-234 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 PRINTS PR00298 60kDa chaperonin signature 82 109 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 PRINTS PR00298 60kDa chaperonin signature 26 52 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 PRINTS PR00298 60kDa chaperonin signature 349 374 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 PRINTS PR00298 60kDa chaperonin signature 397 418 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 PRINTS PR00298 60kDa chaperonin signature 267 290 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 41.547 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 2.9E-259 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 SUPERFAMILY SSF54849 137 202 1.56E-23 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 SUPERFAMILY SSF52029 184 375 1.32E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 SUPERFAMILY SSF48592 6 519 3.13E-75 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 3.6E-101 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 Gene3D G3DSA:3.50.7.10 191 371 1.5E-234 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily ABED_0407 230a3bcaa992e36e7d9b57c180abee79 544 Gene3D G3DSA:1.10.560.10 7 519 1.5E-234 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily ABED_0116 7ddecac906429662616b64559da99fc0 450 Gene3D G3DSA:3.20.20.540 57 371 3.5E-146 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABED_0116 7ddecac906429662616b64559da99fc0 450 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 15 437 7.5E-203 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABED_0116 7ddecac906429662616b64559da99fc0 450 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 14 440 90.755 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABED_0116 7ddecac906429662616b64559da99fc0 450 Pfam PF01964 Radical SAM ThiC family 15 435 2.1E-196 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABED_0930 c663fd3ddfd41b102f9ac7b8614bde16 322 Gene3D G3DSA:2.60.120.1440 107 246 3.6E-22 T 14-10-2018 ABED_0930 c663fd3ddfd41b102f9ac7b8614bde16 322 Pfam PF16344 Domain of unknown function (DUF4974) 220 317 8.0E-11 T 14-10-2018 IPR032508 Protein FecR, C-terminal ABED_0930 c663fd3ddfd41b102f9ac7b8614bde16 322 Gene3D G3DSA:3.55.50.30 247 322 2.4E-8 T 14-10-2018 ABED_0930 c663fd3ddfd41b102f9ac7b8614bde16 322 Pfam PF04773 FecR protein 117 203 4.3E-19 T 14-10-2018 IPR006860 FecR protein ABED_0930 c663fd3ddfd41b102f9ac7b8614bde16 322 PIRSF PIRSF018266 2 322 3.4E-51 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ABED_1921 dc4eb297725289bb4eeafec6ef3f6e62 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 119 3.9E-18 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABED_1921 dc4eb297725289bb4eeafec6ef3f6e62 128 TIGRFAM TIGR00494 crcB: protein CrcB 9 122 3.8E-24 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABED_1921 dc4eb297725289bb4eeafec6ef3f6e62 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 124 16.574 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABED_1501 2330ca3f2e6ff1509b1fb5e7b5e2ba07 228 TIGRFAM TIGR02117 chp_urease_rgn: conserved hypothetical protein 22 221 2.1E-40 T 14-10-2018 IPR011727 Conserved hypothetical protein CHP02117 ABED_1501 2330ca3f2e6ff1509b1fb5e7b5e2ba07 228 Pfam PF09601 Protein of unknown function (DUF2459) 49 217 8.7E-54 T 14-10-2018 IPR011727 Conserved hypothetical protein CHP02117 ABED_1057 2a0ecdd26287c0c0d4e7273027731737 271 Gene3D G3DSA:1.20.1330.10 45 230 3.2E-15 T 14-10-2018 ABED_1057 2a0ecdd26287c0c0d4e7273027731737 271 PRINTS PR00207 Flagellin signature 101 124 8.0E-5 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABED_1057 2a0ecdd26287c0c0d4e7273027731737 271 PRINTS PR00207 Flagellin signature 67 86 8.0E-5 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABED_1057 2a0ecdd26287c0c0d4e7273027731737 271 SUPERFAMILY SSF64518 48 270 4.05E-13 T 14-10-2018 ABED_1057 2a0ecdd26287c0c0d4e7273027731737 271 Pfam PF00669 Bacterial flagellin N-terminal helical region 47 133 1.4E-8 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABED_2074 2a3db420bf1b1374cf5dfc784ac22720 262 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 262 35.553 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABED_2074 2a3db420bf1b1374cf5dfc784ac22720 262 Gene3D G3DSA:3.40.1210.10 1 262 1.8E-83 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABED_2074 2a3db420bf1b1374cf5dfc784ac22720 262 Pfam PF01975 Survival protein SurE 4 196 3.1E-57 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABED_2074 2a3db420bf1b1374cf5dfc784ac22720 262 SUPERFAMILY SSF64167 3 261 1.96E-77 T 14-10-2018 ABED_2074 2a3db420bf1b1374cf5dfc784ac22720 262 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 248 6.6E-69 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ABED_1954 aec841843450dee2f156b73186375d82 581 SUPERFAMILY SSF55073 425 579 4.63E-46 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1954 aec841843450dee2f156b73186375d82 581 Gene3D G3DSA:3.30.450.20 222 314 5.5E-12 T 14-10-2018 ABED_1954 aec841843450dee2f156b73186375d82 581 Gene3D G3DSA:3.30.450.20 167 221 5.5E-12 T 14-10-2018 ABED_1954 aec841843450dee2f156b73186375d82 581 Gene3D G3DSA:3.30.70.270 406 578 5.2E-54 T 14-10-2018 ABED_1954 aec841843450dee2f156b73186375d82 581 SMART SM00267 409 579 4.3E-60 T 14-10-2018 IPR000160 GGDEF domain ABED_1954 aec841843450dee2f156b73186375d82 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 418 577 6.3E-54 T 14-10-2018 IPR000160 GGDEF domain ABED_1954 aec841843450dee2f156b73186375d82 581 SUPERFAMILY SSF103190 160 226 2.51E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABED_1954 aec841843450dee2f156b73186375d82 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 421 574 7.0E-47 T 14-10-2018 IPR000160 GGDEF domain ABED_0449 1e74be7b98145af780d94ee3924d761b 283 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 277 7.8E-90 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 ABED_0449 1e74be7b98145af780d94ee3924d761b 283 Gene3D G3DSA:3.40.50.720 1 272 6.5E-63 T 14-10-2018 ABED_0449 1e74be7b98145af780d94ee3924d761b 283 SUPERFAMILY SSF51735 2 280 9.0E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0449 1e74be7b98145af780d94ee3924d761b 283 Pfam PF08338 Domain of unknown function (DUF1731) 235 281 7.7E-16 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 ABED_0449 1e74be7b98145af780d94ee3924d761b 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 206 8.6E-11 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABED_0619 c6ce041ba05ce03b73615de96f59fff6 191 Gene3D G3DSA:3.40.50.20 1 92 3.3E-21 T 14-10-2018 ABED_0619 c6ce041ba05ce03b73615de96f59fff6 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 138 3.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_0619 c6ce041ba05ce03b73615de96f59fff6 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 141 173 0.0011 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_0619 c6ce041ba05ce03b73615de96f59fff6 191 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 4 181 6.0E-50 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like ABED_0619 c6ce041ba05ce03b73615de96f59fff6 191 SUPERFAMILY SSF51161 4 180 9.7E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_0619 c6ce041ba05ce03b73615de96f59fff6 191 Gene3D G3DSA:2.160.10.10 94 190 3.0E-20 T 14-10-2018 ABED_1138 f78e90f08743f4bb7c0dc4ec8963132d 552 SUPERFAMILY SSF53955 387 536 2.65E-27 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily ABED_1138 f78e90f08743f4bb7c0dc4ec8963132d 552 Gene3D G3DSA:1.10.530.10 379 547 7.4E-27 T 14-10-2018 ABED_1138 f78e90f08743f4bb7c0dc4ec8963132d 552 Pfam PF01464 Transglycosylase SLT domain 397 492 8.2E-18 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 ABED_2082 00af81c81418649c8aee40db1cf78ac2 115 PRINTS PR01651 Protein-export SecG membrane protein signature 52 74 1.3E-6 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABED_2082 00af81c81418649c8aee40db1cf78ac2 115 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.3E-6 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABED_2082 00af81c81418649c8aee40db1cf78ac2 115 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 71 8.3E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABED_2082 00af81c81418649c8aee40db1cf78ac2 115 Pfam PF03840 Preprotein translocase SecG subunit 5 71 4.6E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABED_1761 25ddadd634763699a8efb50a459db7fd 100 ProDom PD351196 CJ1463 JHP0230 HP0245 28 97 8.0E-9 T 14-10-2018 ABED_1761 25ddadd634763699a8efb50a459db7fd 100 Pfam PF10135 Rod binding protein 58 92 2.2E-5 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal ABED_0429 fdc64d1c02fef5295bb083f125530eda 135 Gene3D G3DSA:3.40.50.2300 9 132 1.7E-35 T 14-10-2018 ABED_0429 fdc64d1c02fef5295bb083f125530eda 135 Pfam PF00072 Response regulator receiver domain 15 124 1.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0429 fdc64d1c02fef5295bb083f125530eda 135 SMART SM00448 12 123 3.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0429 fdc64d1c02fef5295bb083f125530eda 135 SUPERFAMILY SSF52172 10 128 8.82E-36 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1662 135d16edacdaa9e2fa8cb651f4d0989c 270 SUPERFAMILY SSF102114 3 260 1.65E-22 T 14-10-2018 ABED_1662 135d16edacdaa9e2fa8cb651f4d0989c 270 Pfam PF13186 Iron-sulfur cluster-binding domain 192 258 8.0E-13 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain ABED_1593 8e32aaed9b38d9cec7e249347566ba14 251 SUPERFAMILY SSF53613 1 249 3.74E-60 T 14-10-2018 IPR029056 Ribokinase-like ABED_1593 8e32aaed9b38d9cec7e249347566ba14 251 Pfam PF08543 Phosphomethylpyrimidine kinase 11 247 1.5E-72 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 ABED_1593 8e32aaed9b38d9cec7e249347566ba14 251 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 248 3.5E-73 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABED_1593 8e32aaed9b38d9cec7e249347566ba14 251 Gene3D G3DSA:3.40.1190.20 1 251 7.0E-79 T 14-10-2018 IPR029056 Ribokinase-like ABED_1390 850ca9081f542d9e589723956127e148 411 SMART SM00852 179 316 2.1E-31 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_1390 850ca9081f542d9e589723956127e148 411 Pfam PF00994 Probable molybdopterin binding domain 179 316 1.3E-22 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_1390 850ca9081f542d9e589723956127e148 411 SUPERFAMILY SSF53218 177 320 1.13E-35 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABED_1390 850ca9081f542d9e589723956127e148 411 Pfam PF03454 MoeA C-terminal region (domain IV) 330 397 3.3E-6 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_1390 850ca9081f542d9e589723956127e148 411 Gene3D G3DSA:3.90.105.10 26 173 4.6E-106 T 14-10-2018 ABED_1390 850ca9081f542d9e589723956127e148 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 14 166 1.2E-37 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_1390 850ca9081f542d9e589723956127e148 411 SUPERFAMILY SSF63867 326 401 8.24E-8 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_1390 850ca9081f542d9e589723956127e148 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 175 309 6.2E-30 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_1390 850ca9081f542d9e589723956127e148 411 Gene3D G3DSA:3.40.980.10 174 325 4.6E-106 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABED_1390 850ca9081f542d9e589723956127e148 411 Gene3D G3DSA:2.170.190.11 50 140 4.6E-106 T 14-10-2018 ABED_1390 850ca9081f542d9e589723956127e148 411 Gene3D G3DSA:2.40.340.10 326 387 4.6E-106 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_1390 850ca9081f542d9e589723956127e148 411 SUPERFAMILY SSF63882 4 175 4.71E-46 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0986 68692efdd4fa40f2929a8a4fe0ce667f 170 SUPERFAMILY SSF56925 44 170 1.18E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ABED_0986 68692efdd4fa40f2929a8a4fe0ce667f 170 Gene3D G3DSA:2.40.160.20 7 170 2.4E-24 T 14-10-2018 ABED_0622 266b8e6c7fd5692caf38a99a46ec526e 348 SUPERFAMILY SSF53448 48 344 7.1E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0622 266b8e6c7fd5692caf38a99a46ec526e 348 Gene3D G3DSA:3.90.550.10 114 347 1.2E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0622 266b8e6c7fd5692caf38a99a46ec526e 348 Pfam PF00571 CBS domain 73 106 0.0032 T 14-10-2018 IPR000644 CBS domain ABED_0622 266b8e6c7fd5692caf38a99a46ec526e 348 Pfam PF00571 CBS domain 7 53 9.0E-6 T 14-10-2018 IPR000644 CBS domain ABED_0622 266b8e6c7fd5692caf38a99a46ec526e 348 Pfam PF00483 Nucleotidyl transferase 122 345 9.2E-42 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABED_0622 266b8e6c7fd5692caf38a99a46ec526e 348 SUPERFAMILY SSF54631 6 55 1.73E-5 T 14-10-2018 ABED_0622 266b8e6c7fd5692caf38a99a46ec526e 348 Gene3D G3DSA:3.10.580.10 1 113 9.4E-17 T 14-10-2018 ABED_1181 77400682daa82aafb8e9643b9d18246a 432 PIRSF PIRSF000139 2 432 2.4E-118 T 14-10-2018 ABED_1181 77400682daa82aafb8e9643b9d18246a 432 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1181 77400682daa82aafb8e9643b9d18246a 432 SUPERFAMILY SSF46548 8 95 9.94E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABED_1181 77400682daa82aafb8e9643b9d18246a 432 Pfam PF13183 4Fe-4S dicluster domain 13 79 2.9E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1181 77400682daa82aafb8e9643b9d18246a 432 Gene3D G3DSA:1.10.1060.10 3 99 1.7E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABED_1181 77400682daa82aafb8e9643b9d18246a 432 Pfam PF02754 Cysteine-rich domain 186 270 8.0E-16 T 14-10-2018 IPR004017 Cysteine-rich domain ABED_1181 77400682daa82aafb8e9643b9d18246a 432 Pfam PF02754 Cysteine-rich domain 323 406 1.9E-11 T 14-10-2018 IPR004017 Cysteine-rich domain ABED_0278 e69c3591cea4e59364a8a99a2d41eeb1 333 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 328 68.636 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABED_0278 e69c3591cea4e59364a8a99a2d41eeb1 333 SUPERFAMILY SSF53901 7 328 2.01E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 ABED_0278 e69c3591cea4e59364a8a99a2d41eeb1 333 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 239 327 3.0E-35 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABED_0278 e69c3591cea4e59364a8a99a2d41eeb1 333 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 187 2.1E-32 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABED_0278 e69c3591cea4e59364a8a99a2d41eeb1 333 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 328 1.4E-133 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABED_0278 e69c3591cea4e59364a8a99a2d41eeb1 333 Gene3D G3DSA:3.40.47.10 1 332 1.1E-128 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 ABED_1880 af26d209ad6d3ad9f44dcda6e5599dd4 783 Pfam PF12705 PD-(D/E)XK nuclease superfamily 549 781 6.8E-35 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ABED_1880 af26d209ad6d3ad9f44dcda6e5599dd4 783 Gene3D G3DSA:3.40.50.300 406 554 1.4E-7 T 14-10-2018 ABED_1880 af26d209ad6d3ad9f44dcda6e5599dd4 783 SUPERFAMILY SSF52540 239 512 2.52E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1880 af26d209ad6d3ad9f44dcda6e5599dd4 783 Gene3D G3DSA:3.90.320.10 574 731 3.4E-5 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ABED_1880 af26d209ad6d3ad9f44dcda6e5599dd4 783 SUPERFAMILY SSF52980 548 717 4.83E-12 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABED_1544 ca613241949d08595a6bb827f72b6b67 378 Gene3D G3DSA:3.90.1720.10 1 171 3.1E-13 T 14-10-2018 ABED_1544 ca613241949d08595a6bb827f72b6b67 378 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 19 159 3.1E-10 T 14-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ABED_1544 ca613241949d08595a6bb827f72b6b67 378 SUPERFAMILY SSF54001 16 170 1.57E-20 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_0621 a889c95bcddcfc2e51e8440731463c0b 385 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 365 2.1E-149 T 14-10-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABED_0621 a889c95bcddcfc2e51e8440731463c0b 385 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 367 1.6E-90 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABED_0621 a889c95bcddcfc2e51e8440731463c0b 385 SUPERFAMILY SSF53756 1 381 3.35E-100 T 14-10-2018 ABED_0621 a889c95bcddcfc2e51e8440731463c0b 385 Gene3D G3DSA:3.40.50.2000 3 365 4.7E-94 T 14-10-2018 ABED_0621 a889c95bcddcfc2e51e8440731463c0b 385 Gene3D G3DSA:3.40.50.2000 188 354 4.7E-94 T 14-10-2018 ABED_0131 a286e28eb9e8d0647bb5da1143c2ccbc 232 SUPERFAMILY SSF51182 4 229 2.63E-62 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_0131 a286e28eb9e8d0647bb5da1143c2ccbc 232 Gene3D G3DSA:2.60.120.10 11 135 3.3E-74 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0131 a286e28eb9e8d0647bb5da1143c2ccbc 232 Pfam PF02678 Pirin 15 119 4.9E-31 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ABED_0131 a286e28eb9e8d0647bb5da1143c2ccbc 232 Gene3D G3DSA:2.60.120.10 9 229 3.3E-74 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0131 a286e28eb9e8d0647bb5da1143c2ccbc 232 PIRSF PIRSF006232 1 228 3.2E-48 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ABED_0063 436e6f826669ab61d7e0189b2488bab4 395 SUPERFAMILY SSF56954 13 391 2.49E-30 T 14-10-2018 ABED_0063 436e6f826669ab61d7e0189b2488bab4 395 Pfam PF02321 Outer membrane efflux protein 21 198 1.6E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0063 436e6f826669ab61d7e0189b2488bab4 395 Gene3D G3DSA:1.20.1600.10 12 393 4.0E-26 T 14-10-2018 ABED_0825 54a474433d448fe57550868428fdf267 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 257 1.4E-57 T 14-10-2018 ABED_0825 54a474433d448fe57550868428fdf267 259 SUPERFAMILY SSF51735 6 257 4.28E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0825 54a474433d448fe57550868428fdf267 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0825 54a474433d448fe57550868428fdf267 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0825 54a474433d448fe57550868428fdf267 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0825 54a474433d448fe57550868428fdf267 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0825 54a474433d448fe57550868428fdf267 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0825 54a474433d448fe57550868428fdf267 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_0825 54a474433d448fe57550868428fdf267 259 Gene3D G3DSA:3.40.50.720 3 259 1.8E-57 T 14-10-2018 ABED_1547 1b4a82e9dd63b7695e47ee38354b9731 641 Gene3D G3DSA:1.10.443.10 292 504 3.0E-5 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABED_1926 428cdbefb94e267e662e9fd894192ccb 182 SUPERFAMILY SSF52374 2 161 4.29E-38 T 14-10-2018 ABED_1926 428cdbefb94e267e662e9fd894192ccb 182 Gene3D G3DSA:3.40.50.620 1 176 2.5E-45 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1926 428cdbefb94e267e662e9fd894192ccb 182 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 61 2.0E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABED_1926 428cdbefb94e267e662e9fd894192ccb 182 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 180 24.535 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ABED_1926 428cdbefb94e267e662e9fd894192ccb 182 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 174 1.8E-44 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ABED_1926 428cdbefb94e267e662e9fd894192ccb 182 Pfam PF01467 Cytidylyltransferase-like 5 158 2.2E-25 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABED_1622 ce89d518d2f28cb60f4ccb05674515f9 375 SUPERFAMILY SSF81324 30 160 3.66E-10 T 14-10-2018 ABED_1622 ce89d518d2f28cb60f4ccb05674515f9 375 Gene3D G3DSA:1.10.287.70 2 127 2.3E-5 T 14-10-2018 ABED_1622 ce89d518d2f28cb60f4ccb05674515f9 375 SUPERFAMILY SSF51735 136 283 3.25E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1622 ce89d518d2f28cb60f4ccb05674515f9 375 SUPERFAMILY SSF116726 279 366 1.31E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABED_1622 ce89d518d2f28cb60f4ccb05674515f9 375 Gene3D G3DSA:3.40.50.720 136 286 7.9E-17 T 14-10-2018 ABED_1622 ce89d518d2f28cb60f4ccb05674515f9 375 Pfam PF02080 TrkA-C domain 296 366 3.2E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ABED_1622 ce89d518d2f28cb60f4ccb05674515f9 375 Gene3D G3DSA:3.30.70.1450 293 372 7.5E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABED_1622 ce89d518d2f28cb60f4ccb05674515f9 375 Pfam PF02254 TrkA-N domain 140 259 1.9E-14 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABED_1754 ae5da5031c889099272eceaa93d81220 154 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 103 149 2.9E-8 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABED_1754 ae5da5031c889099272eceaa93d81220 154 Pfam PF00460 Flagella basal body rod protein 8 34 5.4E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABED_1754 ae5da5031c889099272eceaa93d81220 154 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 152 1.6E-47 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 ABED_1387 0e996ef9408eccec8ed1e97dd46ce8fc 100 Pfam PF08803 Putative mono-oxygenase ydhR 4 98 1.0E-41 T 14-10-2018 IPR014910 Putative monooxygenase YdhR ABED_1387 0e996ef9408eccec8ed1e97dd46ce8fc 100 Gene3D G3DSA:3.30.70.100 1 100 3.2E-40 T 14-10-2018 ABED_1387 0e996ef9408eccec8ed1e97dd46ce8fc 100 SUPERFAMILY SSF54909 3 97 1.18E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel ABED_0787 f597aa5b745f3eeb96c372bbf2c6492e 166 Pfam PF04461 Protein of unknown function (DUF520) 7 166 5.4E-52 T 14-10-2018 IPR007551 Protein of unknown function DUF520 ABED_0787 f597aa5b745f3eeb96c372bbf2c6492e 166 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 5 166 21.878 T 14-10-2018 IPR007551 Protein of unknown function DUF520 ABED_0787 f597aa5b745f3eeb96c372bbf2c6492e 166 SUPERFAMILY SSF89963 97 166 3.92E-22 T 14-10-2018 IPR036183 YajQ-like superfamily ABED_0787 f597aa5b745f3eeb96c372bbf2c6492e 166 SUPERFAMILY SSF89963 7 92 6.02E-25 T 14-10-2018 IPR036183 YajQ-like superfamily ABED_0787 f597aa5b745f3eeb96c372bbf2c6492e 166 Gene3D G3DSA:3.30.70.990 13 104 3.1E-52 T 14-10-2018 IPR035570 UPF0234, N-terminal ABED_0787 f597aa5b745f3eeb96c372bbf2c6492e 166 Gene3D G3DSA:3.30.70.860 8 166 3.1E-52 T 14-10-2018 IPR035571 UPF0234-like, C-terminal ABED_0639 39fa8b110ac2094535f4e2defb7cc967 341 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 2.4E-106 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABED_0639 39fa8b110ac2094535f4e2defb7cc967 341 Gene3D G3DSA:3.40.50.720 4 308 1.8E-133 T 14-10-2018 ABED_0639 39fa8b110ac2094535f4e2defb7cc967 341 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 331 2.0E-19 T 14-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 ABED_0639 39fa8b110ac2094535f4e2defb7cc967 341 Gene3D G3DSA:3.90.25.30 166 321 1.8E-133 T 14-10-2018 ABED_0639 39fa8b110ac2094535f4e2defb7cc967 341 SUPERFAMILY SSF51735 1 261 2.21E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1609 d5242d3fa41d7ee0d5e0ad35ff1f8fc6 245 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 5 234 33.256 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 ABED_1609 d5242d3fa41d7ee0d5e0ad35ff1f8fc6 245 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 84 4.7E-13 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 ABED_1609 d5242d3fa41d7ee0d5e0ad35ff1f8fc6 245 SUPERFAMILY SSF55729 77 228 1.89E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_1609 d5242d3fa41d7ee0d5e0ad35ff1f8fc6 245 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 104 228 1.4E-30 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 ABED_1609 d5242d3fa41d7ee0d5e0ad35ff1f8fc6 245 PIRSF PIRSF037208 1 243 1.1E-73 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 ABED_1407 be4c89fde48c7f66360660b8ec2c6cf7 314 Pfam PF01292 Prokaryotic cytochrome b561 128 291 1.0E-9 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ABED_1407 be4c89fde48c7f66360660b8ec2c6cf7 314 Gene3D G3DSA:1.20.950.20 121 314 8.0E-14 T 14-10-2018 ABED_1407 be4c89fde48c7f66360660b8ec2c6cf7 314 SUPERFAMILY SSF81342 123 312 5.41E-18 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABED_0951 157397e13c46ff3c0ee0c1d3c46cc10b 259 SUPERFAMILY SSF74653 186 236 1.23E-9 T 14-10-2018 ABED_0951 157397e13c46ff3c0ee0c1d3c46cc10b 259 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 186 252 5.5E-12 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 ABED_0951 157397e13c46ff3c0ee0c1d3c46cc10b 259 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 187 256 4.4E-11 T 14-10-2018 IPR006260 TonB/TolA, C-terminal ABED_1895 4747967734fe8a97c949a1df20212223 257 SUPERFAMILY SSF55347 119 227 4.14E-32 T 14-10-2018 ABED_1895 4747967734fe8a97c949a1df20212223 257 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 141 158 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1895 4747967734fe8a97c949a1df20212223 257 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 256 2.1E-69 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1895 4747967734fe8a97c949a1df20212223 257 Gene3D G3DSA:3.40.50.720 5 255 2.0E-78 T 14-10-2018 ABED_1895 4747967734fe8a97c949a1df20212223 257 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 117 1.4E-23 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1895 4747967734fe8a97c949a1df20212223 257 SUPERFAMILY SSF51735 1 257 9.22E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1895 4747967734fe8a97c949a1df20212223 257 Gene3D G3DSA:3.30.360.10 119 225 2.0E-78 T 14-10-2018 ABED_1895 4747967734fe8a97c949a1df20212223 257 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 256 30.146 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1895 4747967734fe8a97c949a1df20212223 257 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 120 255 1.9E-36 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1895 4747967734fe8a97c949a1df20212223 257 PIRSF PIRSF000161 1 257 3.7E-75 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABED_1785 8fb2b49be231f046e845fba98e35f8bd 383 Gene3D G3DSA:3.40.50.11720 33 198 3.6E-30 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 ABED_1785 8fb2b49be231f046e845fba98e35f8bd 383 Gene3D G3DSA:3.40.50.2000 204 381 4.8E-39 T 14-10-2018 ABED_1785 8fb2b49be231f046e845fba98e35f8bd 383 SUPERFAMILY SSF53756 53 361 2.43E-7 T 14-10-2018 ABED_1785 8fb2b49be231f046e845fba98e35f8bd 383 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 50 199 1.1E-40 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 ABED_1868 a0e86bed8667d7ef5117bf698add941e 228 Pfam PF06508 Queuosine biosynthesis protein QueC 8 216 2.3E-73 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABED_1868 a0e86bed8667d7ef5117bf698add941e 228 PIRSF PIRSF006293 5 228 1.4E-78 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABED_1868 a0e86bed8667d7ef5117bf698add941e 228 Gene3D G3DSA:3.40.50.620 5 227 2.0E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1868 a0e86bed8667d7ef5117bf698add941e 228 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 9 209 1.2E-60 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABED_1868 a0e86bed8667d7ef5117bf698add941e 228 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 7 222 50.205 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABED_1868 a0e86bed8667d7ef5117bf698add941e 228 SUPERFAMILY SSF52402 7 224 2.43E-60 T 14-10-2018 ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 Gene3D G3DSA:3.40.50.970 338 536 3.6E-56 T 14-10-2018 ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 SUPERFAMILY SSF52518 357 541 4.65E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 SUPERFAMILY SSF52467 183 363 1.45E-40 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 Gene3D G3DSA:3.40.50.1220 178 331 6.4E-36 T 14-10-2018 ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 SUPERFAMILY SSF52518 1 173 2.8E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 Gene3D G3DSA:3.40.50.970 1 173 6.5E-61 T 14-10-2018 ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 316 9.5E-31 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 525 5.7E-43 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ABED_1944 dc0f8c02d3aa72c9ac5a0493455182e1 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 4.6E-56 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABED_1231 391762ba5b88832fc2eccf3ff0e55988 425 PIRSF PIRSF019015 3 425 2.3E-121 T 14-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type ABED_1231 391762ba5b88832fc2eccf3ff0e55988 425 Pfam PF00877 NlpC/P60 family 285 381 1.9E-11 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABED_1231 391762ba5b88832fc2eccf3ff0e55988 425 SUPERFAMILY SSF54001 268 370 2.65E-12 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_1231 391762ba5b88832fc2eccf3ff0e55988 425 Pfam PF12912 NLPC_P60 stabilising domain, N term 49 113 2.6E-9 T 14-10-2018 IPR025606 NLPC/P60, N-terminal domain ABED_1231 391762ba5b88832fc2eccf3ff0e55988 425 Pfam PF12913 SH3 domain (SH3b1 type) 136 188 4.1E-24 T 14-10-2018 IPR039439 SH3b1 domain ABED_1231 391762ba5b88832fc2eccf3ff0e55988 425 Gene3D G3DSA:3.90.1720.10 255 425 8.6E-44 T 14-10-2018 ABED_2005 26f08888567b735ff44a5365d5ba6c87 404 Gene3D G3DSA:3.40.50.450 268 404 3.6E-27 T 14-10-2018 ABED_2005 26f08888567b735ff44a5365d5ba6c87 404 Gene3D G3DSA:3.40.1190.20 92 267 1.5E-16 T 14-10-2018 IPR029056 Ribokinase-like ABED_2005 26f08888567b735ff44a5365d5ba6c87 404 SUPERFAMILY SSF53613 92 247 3.27E-16 T 14-10-2018 IPR029056 Ribokinase-like ABED_2005 26f08888567b735ff44a5365d5ba6c87 404 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 281 373 2.9E-17 T 14-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 ABED_2005 26f08888567b735ff44a5365d5ba6c87 404 Pfam PF00294 pfkB family carbohydrate kinase 125 244 1.3E-7 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB ABED_2005 26f08888567b735ff44a5365d5ba6c87 404 SUPERFAMILY SSF52309 275 378 4.27E-24 T 14-10-2018 ABED_1215 d39524ff1c5081e31cc2b08308e2f9b0 322 SMART SM00267 134 310 5.8E-22 T 14-10-2018 IPR000160 GGDEF domain ABED_1215 d39524ff1c5081e31cc2b08308e2f9b0 322 SUPERFAMILY SSF55073 151 311 5.41E-30 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1215 d39524ff1c5081e31cc2b08308e2f9b0 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 305 8.8E-29 T 14-10-2018 IPR000160 GGDEF domain ABED_1215 d39524ff1c5081e31cc2b08308e2f9b0 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 308 1.1E-27 T 14-10-2018 IPR000160 GGDEF domain ABED_1215 d39524ff1c5081e31cc2b08308e2f9b0 322 Gene3D G3DSA:3.30.70.270 143 313 7.6E-33 T 14-10-2018 ABED_1699 709dd2ca5c12464d357a8a9f1d0a5ec4 226 Gene3D G3DSA:1.10.10.10 134 225 1.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1699 709dd2ca5c12464d357a8a9f1d0a5ec4 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 222 2.7E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1699 709dd2ca5c12464d357a8a9f1d0a5ec4 226 SMART SM00448 9 120 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1699 709dd2ca5c12464d357a8a9f1d0a5ec4 226 SUPERFAMILY SSF52172 7 177 1.42E-32 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1699 709dd2ca5c12464d357a8a9f1d0a5ec4 226 Pfam PF00072 Response regulator receiver domain 11 116 1.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1699 709dd2ca5c12464d357a8a9f1d0a5ec4 226 SMART SM00862 152 223 2.0E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1699 709dd2ca5c12464d357a8a9f1d0a5ec4 226 Gene3D G3DSA:3.40.50.2300 4 133 4.4E-31 T 14-10-2018 ABED_0903 1f98dbdd8a6492ce51f199c2b74cad46 787 SUPERFAMILY SSF52540 25 444 4.73E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0903 1f98dbdd8a6492ce51f199c2b74cad46 787 Gene3D G3DSA:3.40.50.300 7 135 5.6E-10 T 14-10-2018 ABED_0903 1f98dbdd8a6492ce51f199c2b74cad46 787 Gene3D G3DSA:3.40.50.300 261 435 3.9E-18 T 14-10-2018 ABED_0903 1f98dbdd8a6492ce51f199c2b74cad46 787 Pfam PF01935 Domain of unknown function DUF87 29 308 7.3E-9 T 14-10-2018 IPR002789 Helicase HerA, central domain ABED_1916 c8367235c6a979b2d6e90faa94e21f4b 317 Gene3D G3DSA:3.30.200.20 25 122 1.9E-11 T 14-10-2018 ABED_1916 c8367235c6a979b2d6e90faa94e21f4b 317 Pfam PF01259 SAICAR synthetase 35 284 1.1E-57 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABED_1916 c8367235c6a979b2d6e90faa94e21f4b 317 Gene3D G3DSA:3.30.470.20 130 264 5.7E-31 T 14-10-2018 ABED_1916 c8367235c6a979b2d6e90faa94e21f4b 317 SUPERFAMILY SSF56104 28 315 1.96E-51 T 14-10-2018 ABED_0717 dbd519d4cc50d663157a6b8a339bd124 132 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 130 5.3E-40 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0717 dbd519d4cc50d663157a6b8a339bd124 132 SUPERFAMILY SSF52080 4 130 1.13E-31 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily ABED_0717 dbd519d4cc50d663157a6b8a339bd124 132 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 128 7.1E-20 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P ABED_0717 dbd519d4cc50d663157a6b8a339bd124 132 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 118 13.691 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Gene3D G3DSA:3.30.70.1430 569 672 0.0 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Gene3D G3DSA:1.20.1640.10 515 1026 0.0 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 SUPERFAMILY SSF82866 844 1029 1.12E-38 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Gene3D G3DSA:3.30.70.1440 673 869 0.0 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Gene3D G3DSA:1.20.1640.10 9 514 0.0 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1040 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 SUPERFAMILY SSF82866 297 498 1.22E-48 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 SUPERFAMILY SSF82693 39 132 2.44E-29 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 SUPERFAMILY SSF82714 183 273 5.49E-20 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Gene3D G3DSA:3.30.70.1430 39 821 0.0 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.2E-103 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 SUPERFAMILY SSF82693 137 331 7.85E-22 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 SUPERFAMILY SSF82714 726 813 6.15E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 Pfam PF00873 AcrB/AcrD/AcrF family 2 1030 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 SUPERFAMILY SSF82693 567 675 1.26E-18 T 14-10-2018 ABED_1956 d2a34f9ee5064e00ceb5f470046a1535 1041 SUPERFAMILY SSF82693 676 860 3.45E-18 T 14-10-2018 ABED_1542 5925d554a399ed090eff107669c13053 789 Gene3D G3DSA:3.40.50.300 522 789 3.7E-27 T 14-10-2018 ABED_1542 5925d554a399ed090eff107669c13053 789 Gene3D G3DSA:3.40.50.300 3 262 2.6E-32 T 14-10-2018 ABED_1542 5925d554a399ed090eff107669c13053 789 SUPERFAMILY SSF52540 3 783 5.95E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1542 5925d554a399ed090eff107669c13053 789 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 100 5.8E-12 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ABED_0451 4631bc234d88137e043351cba8b3fe3c 190 Gene3D G3DSA:3.40.50.2020 97 189 7.6E-10 T 14-10-2018 ABED_0451 4631bc234d88137e043351cba8b3fe3c 190 SUPERFAMILY SSF53271 84 187 1.15E-10 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like ABED_0451 4631bc234d88137e043351cba8b3fe3c 190 Pfam PF00156 Phosphoribosyl transferase domain 123 186 3.1E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABED_1791 787551af5c411b7853cd8620752aaf85 414 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 318 358 2.4E-4 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 ABED_1791 787551af5c411b7853cd8620752aaf85 414 SUPERFAMILY SSF53756 139 365 8.79E-11 T 14-10-2018 ABED_1791 787551af5c411b7853cd8620752aaf85 414 Gene3D G3DSA:3.40.50.2000 244 391 4.7E-6 T 14-10-2018 ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 Gene3D G3DSA:1.10.287.130 162 244 1.2E-9 T 14-10-2018 ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 SUPERFAMILY SSF55874 251 393 2.23E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 SMART SM00387 289 397 3.4E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 394 1.7E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 SUPERFAMILY SSF47384 177 243 1.43E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 356 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1598 b1bfa611443fa624bf66ad29715ed608 397 Gene3D G3DSA:3.30.565.10 247 396 2.1E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0883 ecfd1df22232eb63d53e6a8708a1cc9d 415 SUPERFAMILY SSF103473 5 406 1.12E-57 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_0883 ecfd1df22232eb63d53e6a8708a1cc9d 415 Gene3D G3DSA:1.20.1250.20 3 411 3.4E-54 T 14-10-2018 ABED_0883 ecfd1df22232eb63d53e6a8708a1cc9d 415 Pfam PF07690 Major Facilitator Superfamily 28 366 8.5E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_1333 22e43600e4d47b8c1cec0d938a524f36 319 Gene3D G3DSA:2.60.120.1440 104 243 1.7E-30 T 14-10-2018 ABED_1333 22e43600e4d47b8c1cec0d938a524f36 319 Pfam PF16344 Domain of unknown function (DUF4974) 216 313 6.8E-11 T 14-10-2018 IPR032508 Protein FecR, C-terminal ABED_1333 22e43600e4d47b8c1cec0d938a524f36 319 Gene3D G3DSA:3.55.50.30 244 319 1.5E-6 T 14-10-2018 ABED_1333 22e43600e4d47b8c1cec0d938a524f36 319 PIRSF PIRSF018266 1 318 8.6E-61 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ABED_1333 22e43600e4d47b8c1cec0d938a524f36 319 Pfam PF04773 FecR protein 112 201 1.6E-20 T 14-10-2018 IPR006860 FecR protein ABED_1712 84c60b3eb4880743ed59d6d9e166fd45 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1712 84c60b3eb4880743ed59d6d9e166fd45 56 SUPERFAMILY SSF57829 2 53 8.7E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ABED_1712 84c60b3eb4880743ed59d6d9e166fd45 56 Pfam PF00471 Ribosomal protein L33 7 53 3.5E-18 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1712 84c60b3eb4880743ed59d6d9e166fd45 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 6 55 1.1E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1712 84c60b3eb4880743ed59d6d9e166fd45 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 16.456 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1712 84c60b3eb4880743ed59d6d9e166fd45 56 Gene3D G3DSA:2.20.28.120 1 54 3.0E-21 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0328 b044dbfad5195582814fc4547e75c9b4 319 Gene3D G3DSA:2.130.10.10 15 167 1.3E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ABED_0328 b044dbfad5195582814fc4547e75c9b4 319 SUPERFAMILY SSF50978 20 317 1.01E-26 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 ABED_0328 b044dbfad5195582814fc4547e75c9b4 319 Gene3D G3DSA:2.130.10.10 168 319 9.6E-15 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ABED_0328 b044dbfad5195582814fc4547e75c9b4 319 SMART SM00320 196 234 12.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 ABED_0328 b044dbfad5195582814fc4547e75c9b4 319 SMART SM00320 154 193 79.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 ABED_0328 b044dbfad5195582814fc4547e75c9b4 319 SMART SM00320 235 275 37.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 ABED_0328 b044dbfad5195582814fc4547e75c9b4 319 SMART SM00320 278 316 92.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 ABED_0328 b044dbfad5195582814fc4547e75c9b4 319 SMART SM00320 21 57 16.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 ABED_1289 3686b04335f1b6e8ec714264944b2653 485 Gene3D G3DSA:1.10.4030.30 41 356 2.7E-7 T 14-10-2018 ABED_1289 3686b04335f1b6e8ec714264944b2653 485 SUPERFAMILY SSF109998 40 243 1.53E-21 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABED_1289 3686b04335f1b6e8ec714264944b2653 485 Pfam PF13624 SurA N-terminal domain 1 164 8.1E-45 T 14-10-2018 ABED_1289 3686b04335f1b6e8ec714264944b2653 485 Pfam PF13145 PPIC-type PPIASE domain 240 358 7.6E-18 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 ABED_1289 3686b04335f1b6e8ec714264944b2653 485 Gene3D G3DSA:3.10.50.40 223 347 2.7E-7 T 14-10-2018 ABED_1527 a3814c453570cf8db41e37229cabb44e 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 394 7.4E-10 T 14-10-2018 IPR003004 GspF/PilC family ABED_1527 a3814c453570cf8db41e37229cabb44e 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 359 373 7.4E-10 T 14-10-2018 IPR003004 GspF/PilC family ABED_1527 a3814c453570cf8db41e37229cabb44e 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 154 182 7.4E-10 T 14-10-2018 IPR003004 GspF/PilC family ABED_1527 a3814c453570cf8db41e37229cabb44e 396 Pfam PF00482 Type II secretion system (T2SS), protein F 64 182 6.0E-12 T 14-10-2018 IPR018076 Type II secretion system F domain ABED_1527 a3814c453570cf8db41e37229cabb44e 396 Pfam PF00482 Type II secretion system (T2SS), protein F 270 386 3.8E-13 T 14-10-2018 IPR018076 Type II secretion system F domain ABED_1527 a3814c453570cf8db41e37229cabb44e 396 Gene3D G3DSA:1.20.81.30 48 162 1.0E-11 T 14-10-2018 ABED_1527 a3814c453570cf8db41e37229cabb44e 396 Gene3D G3DSA:1.20.81.30 248 357 4.0E-11 T 14-10-2018 ABED_1633 44fba79c636a0d7309a9e96278e367b4 249 SUPERFAMILY SSF53448 1 144 6.72E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1633 44fba79c636a0d7309a9e96278e367b4 249 Pfam PF00535 Glycosyl transferase family 2 4 121 3.8E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABED_1633 44fba79c636a0d7309a9e96278e367b4 249 Gene3D G3DSA:3.90.550.10 1 189 8.9E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1809 301b736fcb39f58a8f2acd81c70cfddc 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 3.5E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_1809 301b736fcb39f58a8f2acd81c70cfddc 201 SUPERFAMILY SSF46689 3 80 9.23E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_1809 301b736fcb39f58a8f2acd81c70cfddc 201 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 200 1.3E-7 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type ABED_1809 301b736fcb39f58a8f2acd81c70cfddc 201 Gene3D G3DSA:1.10.10.60 3 59 1.1E-21 T 14-10-2018 ABED_1809 301b736fcb39f58a8f2acd81c70cfddc 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_1809 301b736fcb39f58a8f2acd81c70cfddc 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_1809 301b736fcb39f58a8f2acd81c70cfddc 201 Gene3D G3DSA:1.10.357.10 63 201 6.7E-22 T 14-10-2018 ABED_1809 301b736fcb39f58a8f2acd81c70cfddc 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABED_1041 bdfe9084fe467a59bf262f623a457f31 208 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 56 180 2.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABED_1041 bdfe9084fe467a59bf262f623a457f31 208 Gene3D G3DSA:3.40.50.1000 4 186 1.0E-47 T 14-10-2018 IPR023214 HAD superfamily ABED_1041 bdfe9084fe467a59bf262f623a457f31 208 SUPERFAMILY SSF56784 1 203 5.87E-48 T 14-10-2018 IPR036412 HAD-like superfamily ABED_1041 bdfe9084fe467a59bf262f623a457f31 208 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 180 1.8E-39 T 14-10-2018 ABED_1041 bdfe9084fe467a59bf262f623a457f31 208 Gene3D G3DSA:1.10.150.240 16 80 1.0E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABED_2036 0328650542ffb436774214311a3afb1c 396 SUPERFAMILY SSF103473 4 390 1.44E-54 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_2036 0328650542ffb436774214311a3afb1c 396 Gene3D G3DSA:1.20.1720.10 10 390 1.2E-75 T 14-10-2018 ABED_2036 0328650542ffb436774214311a3afb1c 396 Pfam PF07690 Major Facilitator Superfamily 15 350 1.0E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_2036 0328650542ffb436774214311a3afb1c 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 390 4.3E-68 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 ABED_1841 69a6a61dce0ccc94b91e7663007e116f 207 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 198 2.8E-42 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ABED_1841 69a6a61dce0ccc94b91e7663007e116f 207 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 10 207 19.046 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ABED_1841 69a6a61dce0ccc94b91e7663007e116f 207 SMART SM01207 13 199 2.6E-69 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ABED_1841 69a6a61dce0ccc94b91e7663007e116f 207 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 7 206 2.5E-50 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ABED_2063 1fb5e26416f32862c5527c80e226405f 676 Pfam PF01973 Protein of unknown function DUF115 277 446 1.8E-40 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like ABED_0534 8b3342d568747e0960e66142b881c515 401 Pfam PF05940 NnrS protein 8 394 6.6E-55 T 14-10-2018 IPR010266 NnrS ABED_0588 830ef6f97798deb43ef6282e87d98193 769 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 530 684 2.1E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0588 830ef6f97798deb43ef6282e87d98193 769 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 165 1.9E-6 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABED_0588 830ef6f97798deb43ef6282e87d98193 769 SMART SM01358 37 285 1.0E-48 T 14-10-2018 IPR032255 Helical bimodular sensor domain ABED_0588 830ef6f97798deb43ef6282e87d98193 769 Gene3D G3DSA:1.10.287.950 421 714 3.0E-58 T 14-10-2018 ABED_0588 830ef6f97798deb43ef6282e87d98193 769 SUPERFAMILY SSF58104 491 708 1.83E-54 T 14-10-2018 ABED_0588 830ef6f97798deb43ef6282e87d98193 769 SMART SM00283 471 720 6.4E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 Gene3D G3DSA:3.40.50.10490 190 409 8.1E-103 T 14-10-2018 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 SUPERFAMILY SSF53697 51 408 2.36E-92 T 14-10-2018 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 PRINTS PR00662 Glucose-6-phosphate isomerase signature 382 395 1.6E-19 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 PRINTS PR00662 Glucose-6-phosphate isomerase signature 368 382 1.6E-19 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 PRINTS PR00662 Glucose-6-phosphate isomerase signature 239 260 1.6E-19 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 PRINTS PR00662 Glucose-6-phosphate isomerase signature 350 368 1.6E-19 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 PRINTS PR00662 Glucose-6-phosphate isomerase signature 55 74 1.6E-19 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 PRINTS PR00662 Glucose-6-phosphate isomerase signature 165 183 1.6E-19 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 Pfam PF00342 Phosphoglucose isomerase 53 408 1.3E-37 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 409 22.549 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0766 2b0e62492f36e7739a4c129bc5d80065 410 Gene3D G3DSA:3.40.50.10490 46 189 8.1E-103 T 14-10-2018 ABED_0368 680ae1bd2393b637fcb85ca581dfbf27 410 SUPERFAMILY SSF56317 192 396 2.62E-12 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABED_0368 680ae1bd2393b637fcb85ca581dfbf27 410 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 409 4.9E-44 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 ABED_2122 461a2120f57268b16322d700265ae463 245 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_2122 461a2120f57268b16322d700265ae463 245 SMART SM00382 33 220 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_2122 461a2120f57268b16322d700265ae463 245 Pfam PF00005 ABC transporter 25 157 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_2122 461a2120f57268b16322d700265ae463 245 Gene3D G3DSA:3.40.50.300 2 215 2.3E-60 T 14-10-2018 ABED_2122 461a2120f57268b16322d700265ae463 245 SUPERFAMILY SSF52540 9 227 1.89E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 3.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 3.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 3.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 414 6.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 SMART SM00387 315 422 2.2E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 Gene3D G3DSA:3.30.565.10 269 418 1.4E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 SMART SM00388 204 270 5.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 269 3.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 SUPERFAMILY SSF47384 187 269 2.35E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 Gene3D G3DSA:1.10.287.130 155 268 3.1E-14 T 14-10-2018 ABED_0349 080698850d10f6d3dcba1dc06fd45386 426 SUPERFAMILY SSF55874 276 407 1.3E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 302 1.5E-76 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 6 17 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 SUPERFAMILY SSF52374 2 295 1.07E-79 T 14-10-2018 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 432 24.376 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 Gene3D G3DSA:3.40.50.620 1 311 1.3E-101 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 Gene3D G3DSA:1.10.10.350 341 428 7.6E-9 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 SUPERFAMILY SSF48163 277 424 2.35E-20 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 425 8.1E-134 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 PRINTS PR00987 Glutamyl-tRNA synthetase signature 176 186 1.7E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 200 1.7E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 1.7E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 1.7E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_1136 6a8ed4fe1bf3f28c5084ef349dec8c1f 433 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 1.7E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABED_0414 0bea2a2e2843f644a354a7f687461f25 523 SUPERFAMILY SSF81442 13 391 2.22E-11 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_0414 0bea2a2e2843f644a354a7f687461f25 523 Gene3D G3DSA:1.20.210.10 8 404 1.9E-10 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SUPERFAMILY SSF50249 260 358 2.91E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1856 9848d5d331190f000ad24e9567c70899 550 PRINTS PR00681 Ribosomal protein S1 signature 335 353 1.5E-35 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 PRINTS PR00681 Ribosomal protein S1 signature 160 180 1.5E-35 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 PRINTS PR00681 Ribosomal protein S1 signature 46 60 1.5E-35 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 PRINTS PR00681 Ribosomal protein S1 signature 295 314 1.5E-35 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 PRINTS PR00681 Ribosomal protein S1 signature 217 238 1.5E-35 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 PRINTS PR00681 Ribosomal protein S1 signature 116 132 1.5E-35 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 PRINTS PR00681 Ribosomal protein S1 signature 28 46 1.5E-35 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SUPERFAMILY SSF50249 195 278 1.04E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1856 9848d5d331190f000ad24e9567c70899 550 SUPERFAMILY SSF50249 112 181 4.2E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1856 9848d5d331190f000ad24e9567c70899 550 Pfam PF00575 S1 RNA binding domain 195 265 5.0E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 ABED_1856 9848d5d331190f000ad24e9567c70899 550 Pfam PF00575 S1 RNA binding domain 26 82 9.8E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 ABED_1856 9848d5d331190f000ad24e9567c70899 550 Pfam PF00575 S1 RNA binding domain 279 352 6.2E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 ABED_1856 9848d5d331190f000ad24e9567c70899 550 Pfam PF00575 S1 RNA binding domain 453 519 3.1E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 ABED_1856 9848d5d331190f000ad24e9567c70899 550 Pfam PF00575 S1 RNA binding domain 365 437 1.5E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SUPERFAMILY SSF50249 432 538 1.19E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1856 9848d5d331190f000ad24e9567c70899 550 SMART SM00316 280 352 3.7E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SMART SM00316 367 437 3.4E-23 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SMART SM00316 26 91 7.6E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SMART SM00316 452 519 6.3E-16 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SMART SM00316 195 265 1.8E-17 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SMART SM00316 110 176 0.0058 T 14-10-2018 IPR022967 RNA-binding domain, S1 ABED_1856 9848d5d331190f000ad24e9567c70899 550 Gene3D G3DSA:2.40.50.140 189 275 2.2E-19 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 Gene3D G3DSA:2.40.50.140 276 365 9.2E-27 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SUPERFAMILY SSF50249 16 107 3.43E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1856 9848d5d331190f000ad24e9567c70899 550 Gene3D G3DSA:2.40.50.140 366 447 5.6E-24 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 Gene3D G3DSA:2.40.50.140 451 528 1.8E-17 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 SUPERFAMILY SSF50249 367 452 8.95E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1856 9848d5d331190f000ad24e9567c70899 550 Gene3D G3DSA:2.40.50.140 12 104 5.0E-10 T 14-10-2018 ABED_1856 9848d5d331190f000ad24e9567c70899 550 Gene3D G3DSA:2.40.50.140 108 188 6.7E-6 T 14-10-2018 ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 Gene3D G3DSA:2.160.10.10 96 299 8.1E-59 T 14-10-2018 ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 313 3.7E-106 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 SUPERFAMILY SSF51161 31 305 5.53E-74 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 314 32.291 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 189 206 0.0018 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 212 246 4.7E-8 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 149 4.8E-10 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 19 86 1.6E-19 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 ABED_1099 39b0392a753ea747d0fb16215ad9f5ac 315 Gene3D G3DSA:3.40.1390.10 1 95 3.1E-22 T 14-10-2018 ABED_0441 2c65344fe27bf2c8d8c88a018cbf265b 457 SUPERFAMILY SSF102114 85 408 4.45E-44 T 14-10-2018 ABED_0441 2c65344fe27bf2c8d8c88a018cbf265b 457 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 94 105 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0441 2c65344fe27bf2c8d8c88a018cbf265b 457 TIGRFAM TIGR03906 quino_hemo_SAM: quinohemoprotein amine dehydrogenase maturation protein 12 455 9.3E-173 T 14-10-2018 IPR023886 Quinohemoprotein amine dehydrogenase, gamma subunit maturation protein ABED_0441 2c65344fe27bf2c8d8c88a018cbf265b 457 Pfam PF13353 4Fe-4S single cluster domain 95 224 4.7E-12 T 14-10-2018 ABED_0441 2c65344fe27bf2c8d8c88a018cbf265b 457 Gene3D G3DSA:3.20.20.70 85 447 2.4E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0441 2c65344fe27bf2c8d8c88a018cbf265b 457 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 339 427 2.0E-14 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain ABED_0441 2c65344fe27bf2c8d8c88a018cbf265b 457 Pfam PF04055 Radical SAM superfamily 93 258 4.8E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_1642 8c53d445014d51095c31ac8fa46d0a1e 482 PIRSF PIRSF016636 1 482 5.0E-157 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB ABED_1642 8c53d445014d51095c31ac8fa46d0a1e 482 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 47 370 3.0E-38 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT ABED_1642 8c53d445014d51095c31ac8fa46d0a1e 482 PIRSF PIRSF500217 1 482 7.0E-153 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 ABED_1526 b853fe0952a3cdcb4e262db5700be54b 317 SUPERFAMILY SSF143865 1 256 4.05E-39 T 14-10-2018 ABED_1526 b853fe0952a3cdcb4e262db5700be54b 317 Gene3D G3DSA:1.20.58.340 134 258 1.5E-5 T 14-10-2018 ABED_1526 b853fe0952a3cdcb4e262db5700be54b 317 Pfam PF01544 CorA-like Mg2+ transporter protein 29 313 3.4E-54 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ABED_1526 b853fe0952a3cdcb4e262db5700be54b 317 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 7 317 2.3E-71 T 14-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 ABED_1526 b853fe0952a3cdcb4e262db5700be54b 317 Gene3D G3DSA:1.20.58.340 260 317 6.2E-21 T 14-10-2018 ABED_1526 b853fe0952a3cdcb4e262db5700be54b 317 SUPERFAMILY SSF144083 252 315 6.15E-21 T 14-10-2018 ABED_0761 7953bd2fe9563a6462f658b921d69bd7 471 Gene3D G3DSA:3.50.50.60 8 449 6.8E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0761 7953bd2fe9563a6462f658b921d69bd7 471 SUPERFAMILY SSF51905 5 457 3.37E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0761 7953bd2fe9563a6462f658b921d69bd7 471 Gene3D G3DSA:3.90.660.50 84 411 6.8E-10 T 14-10-2018 ABED_0761 7953bd2fe9563a6462f658b921d69bd7 471 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 71 1.3E-6 T 14-10-2018 ABED_0997 38c4a270a1535450e6f9b2fbc3a41c0f 105 Gene3D G3DSA:1.10.3730.20 1 105 1.1E-32 T 14-10-2018 ABED_0997 38c4a270a1535450e6f9b2fbc3a41c0f 105 SUPERFAMILY SSF103481 6 102 6.8E-19 T 14-10-2018 ABED_0997 38c4a270a1535450e6f9b2fbc3a41c0f 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.0E-30 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ABED_0855 2b73a2214830df23fe02e30834679938 281 Gene3D G3DSA:3.20.20.70 122 267 2.5E-62 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0855 2b73a2214830df23fe02e30834679938 281 SUPERFAMILY SSF51690 106 268 5.1E-38 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABED_0855 2b73a2214830df23fe02e30834679938 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 17 103 7.0E-17 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 ABED_0855 2b73a2214830df23fe02e30834679938 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 106 266 4.5E-33 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 ABED_0855 2b73a2214830df23fe02e30834679938 281 SUPERFAMILY SSF54675 4 103 4.71E-15 T 14-10-2018 ABED_0855 2b73a2214830df23fe02e30834679938 281 TIGRFAM TIGR01334 modD: modD protein 2 268 7.0E-61 T 14-10-2018 IPR006242 Putative pyrophosphorylase ModD GO:0016763 ABED_0855 2b73a2214830df23fe02e30834679938 281 PIRSF PIRSF006250 1 274 5.5E-51 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 ABED_0855 2b73a2214830df23fe02e30834679938 281 Gene3D G3DSA:3.90.1170.20 11 121 2.5E-62 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 ABED_1459 6e9c6b72d71ac1d46e73bcf56fc49248 157 Pfam PF04542 Sigma-70 region 2 3 58 2.3E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1459 6e9c6b72d71ac1d46e73bcf56fc49248 157 Gene3D G3DSA:1.10.1740.10 1 67 1.0E-11 T 14-10-2018 ABED_1459 6e9c6b72d71ac1d46e73bcf56fc49248 157 SUPERFAMILY SSF88946 2 68 8.63E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABED_1459 6e9c6b72d71ac1d46e73bcf56fc49248 157 Gene3D G3DSA:1.10.10.10 80 155 3.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1459 6e9c6b72d71ac1d46e73bcf56fc49248 157 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 152 4.2E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABED_1459 6e9c6b72d71ac1d46e73bcf56fc49248 157 Pfam PF08281 Sigma-70, region 4 98 146 3.7E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_1459 6e9c6b72d71ac1d46e73bcf56fc49248 157 SUPERFAMILY SSF88659 96 154 3.92E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_1811 9caaaa2ce1109a2d6c2abd4680c15216 323 Gene3D G3DSA:3.60.15.10 44 317 2.9E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABED_1811 9caaaa2ce1109a2d6c2abd4680c15216 323 PIRSF PIRSF038896 1 320 1.5E-83 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 ABED_1811 9caaaa2ce1109a2d6c2abd4680c15216 323 Pfam PF12706 Beta-lactamase superfamily domain 78 271 5.4E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase ABED_1811 9caaaa2ce1109a2d6c2abd4680c15216 323 SUPERFAMILY SSF56281 60 286 1.83E-31 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABED_0148 31bf929df7a3df680019d709a8c11f5c 404 SUPERFAMILY SSF53383 7 401 4.36E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0148 31bf929df7a3df680019d709a8c11f5c 404 Gene3D G3DSA:3.90.1150.10 299 396 1.7E-116 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0148 31bf929df7a3df680019d709a8c11f5c 404 Pfam PF00155 Aminotransferase class I and II 34 394 1.9E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABED_0148 31bf929df7a3df680019d709a8c11f5c 404 Gene3D G3DSA:3.40.640.10 67 298 1.7E-116 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0048 85ccb759ff1184d4ad59a8de2bf23d96 172 PIRSF PIRSF004638 1 146 1.8E-47 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 ABED_0048 85ccb759ff1184d4ad59a8de2bf23d96 172 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 143 7.1E-54 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 ABED_0048 85ccb759ff1184d4ad59a8de2bf23d96 172 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 143 1.7E-46 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 ABED_1106 c0681f64effb5c43cb2bc7d10c506bcd 524 Pfam PF00916 Sulfate permease family 8 366 2.5E-84 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ABED_1106 c0681f64effb5c43cb2bc7d10c506bcd 524 SUPERFAMILY SSF52091 418 518 2.75E-13 T 14-10-2018 IPR036513 STAS domain superfamily ABED_1106 c0681f64effb5c43cb2bc7d10c506bcd 524 Gene3D G3DSA:3.30.750.24 409 497 4.0E-16 T 14-10-2018 IPR036513 STAS domain superfamily ABED_1106 c0681f64effb5c43cb2bc7d10c506bcd 524 Pfam PF01740 STAS domain 418 514 4.1E-11 T 14-10-2018 IPR002645 STAS domain ABED_1730 60d9719ff63d808b48e627359e85e4be 737 SUPERFAMILY SSF52540 431 732 1.86E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 199 312 8.6E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Gene3D G3DSA:1.10.8.60 339 432 1.6E-28 T 14-10-2018 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 SUPERFAMILY SSF52540 156 408 9.63E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Gene3D G3DSA:3.40.50.300 143 338 7.6E-66 T 14-10-2018 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Pfam PF07724 AAA domain (Cdc48 subfamily) 480 637 3.4E-42 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 485 503 1.2E-34 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 556 574 1.2E-34 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 589 603 1.2E-34 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 527 545 1.2E-34 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 SUPERFAMILY SSF81923 1 140 1.16E-34 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 2 725 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Gene3D G3DSA:1.10.1780.10 1 141 1.3E-27 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 SMART SM00382 481 645 7.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1730 60d9719ff63d808b48e627359e85e4be 737 SMART SM00382 194 340 6.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 644 724 4.9E-20 T 14-10-2018 IPR019489 Clp ATPase, C-terminal ABED_1730 60d9719ff63d808b48e627359e85e4be 737 SMART SM01086 644 732 1.5E-28 T 14-10-2018 IPR019489 Clp ATPase, C-terminal ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Gene3D G3DSA:1.10.8.60 644 736 6.4E-27 T 14-10-2018 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Gene3D G3DSA:3.40.50.300 434 643 4.9E-70 T 14-10-2018 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 290 302 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ABED_1730 60d9719ff63d808b48e627359e85e4be 737 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.9E-6 T 14-10-2018 IPR004176 Clp, N-terminal ABED_1730 60d9719ff63d808b48e627359e85e4be 737 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 512 530 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 ABED_1883 6cac74a365494e80a3347625255b7b92 80 Pfam PF13179 Family of unknown function (DUF4006) 7 72 4.8E-30 T 14-10-2018 IPR025065 Protein of unknown function DUF4006 ABED_0877 d1589734e20e25e29dfb4547f89ae630 437 Gene3D G3DSA:1.25.40.10 13 174 3.2E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0877 d1589734e20e25e29dfb4547f89ae630 437 Pfam PF04575 Protein of unknown function (DUF560) 153 427 3.4E-6 T 14-10-2018 IPR007655 Protein of unknown function DUF560 ABED_0877 d1589734e20e25e29dfb4547f89ae630 437 SUPERFAMILY SSF48452 20 123 2.46E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0877 d1589734e20e25e29dfb4547f89ae630 437 Pfam PF14559 Tetratricopeptide repeat 74 123 9.4E-13 T 14-10-2018 ABED_0877 d1589734e20e25e29dfb4547f89ae630 437 SMART SM00028 14 47 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0877 d1589734e20e25e29dfb4547f89ae630 437 SMART SM00028 94 127 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0877 d1589734e20e25e29dfb4547f89ae630 437 SMART SM00028 60 93 3.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_1507 d4c1d4e577f49321d3999c399a54bdd8 110 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 24 68 2.0E-11 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABED_1507 d4c1d4e577f49321d3999c399a54bdd8 110 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 18.441 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABED_1507 d4c1d4e577f49321d3999c399a54bdd8 110 SMART SM01234 1 68 8.4E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABED_1507 d4c1d4e577f49321d3999c399a54bdd8 110 Pfam PF01809 Haemolytic domain 3 67 6.1E-21 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABED_1507 d4c1d4e577f49321d3999c399a54bdd8 110 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 7 77 6.6E-24 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABED_0691 d0350bb7da09a0bbc563f1b34be3b946 730 Gene3D G3DSA:1.10.287.950 306 599 9.4E-54 T 14-10-2018 ABED_0691 d0350bb7da09a0bbc563f1b34be3b946 730 SMART SM00283 353 610 2.3E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0691 d0350bb7da09a0bbc563f1b34be3b946 730 Gene3D G3DSA:3.30.450.290 39 174 4.3E-9 T 14-10-2018 ABED_0691 d0350bb7da09a0bbc563f1b34be3b946 730 SUPERFAMILY SSF58104 348 609 3.27E-50 T 14-10-2018 ABED_0691 d0350bb7da09a0bbc563f1b34be3b946 730 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 412 566 4.4E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0691 d0350bb7da09a0bbc563f1b34be3b946 730 Pfam PF11845 Protein of unknown function (DUF3365) 20 154 4.4E-7 T 14-10-2018 IPR021796 Protein of unknown function DUF3365 ABED_2037 1dbd111d6c63d0e7d7acaa02c8b26b74 541 Pfam PF00916 Sulfate permease family 2 381 9.8E-80 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ABED_2037 1dbd111d6c63d0e7d7acaa02c8b26b74 541 SUPERFAMILY SSF52091 433 532 2.75E-15 T 14-10-2018 IPR036513 STAS domain superfamily ABED_2037 1dbd111d6c63d0e7d7acaa02c8b26b74 541 Gene3D G3DSA:3.30.750.24 418 537 2.6E-21 T 14-10-2018 IPR036513 STAS domain superfamily ABED_2037 1dbd111d6c63d0e7d7acaa02c8b26b74 541 Pfam PF01740 STAS domain 434 529 1.1E-15 T 14-10-2018 IPR002645 STAS domain ABED_1943 1afd70cd064d38fc4af1d94a6c0aa896 463 Pfam PF00171 Aldehyde dehydrogenase family 3 455 8.7E-126 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABED_1943 1afd70cd064d38fc4af1d94a6c0aa896 463 Gene3D G3DSA:3.40.309.10 237 424 7.0E-128 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABED_1943 1afd70cd064d38fc4af1d94a6c0aa896 463 SUPERFAMILY SSF53720 3 459 6.15E-125 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABED_1943 1afd70cd064d38fc4af1d94a6c0aa896 463 Gene3D G3DSA:3.40.605.10 2 450 7.0E-128 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABED_0060 eb41406d30223076df817af16e23d3d6 219 Pfam PF00072 Response regulator receiver domain 3 112 5.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0060 eb41406d30223076df817af16e23d3d6 219 Gene3D G3DSA:1.10.10.10 128 219 6.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0060 eb41406d30223076df817af16e23d3d6 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 6.6E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0060 eb41406d30223076df817af16e23d3d6 219 SMART SM00448 1 112 1.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0060 eb41406d30223076df817af16e23d3d6 219 SMART SM00862 146 216 1.1E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0060 eb41406d30223076df817af16e23d3d6 219 SUPERFAMILY SSF52172 1 171 5.27E-34 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0060 eb41406d30223076df817af16e23d3d6 219 Gene3D G3DSA:3.40.50.2300 1 122 6.9E-31 T 14-10-2018 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 52 9.0E-13 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-17 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 17.104 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.0E-19 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.7E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.7E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.7E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.7E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2078 13a920fd70626aa9ce607ac69834832e 70 Gene3D G3DSA:1.20.5.1150 16 54 7.9E-7 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 SUPERFAMILY SSF55136 142 289 2.09E-25 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 Pfam PF12833 Helix-turn-helix domain 36 112 1.6E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 SMART SM00871 139 290 8.8E-19 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 Pfam PF06445 GyrI-like small molecule binding domain 141 283 1.6E-18 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 SUPERFAMILY SSF46689 63 114 1.39E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 Gene3D G3DSA:1.10.10.60 2 60 6.7E-11 T 14-10-2018 ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 Gene3D G3DSA:1.10.10.60 61 113 2.9E-14 T 14-10-2018 ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 Gene3D G3DSA:3.20.80.10 141 290 4.5E-28 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 SMART SM00342 27 111 5.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_0162 c59cc0137f0c438ab3a4591d2729084f 291 SUPERFAMILY SSF46689 14 58 3.14E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0995 d710b414b6c9ca7bb69b786e4619660a 179 Gene3D G3DSA:3.40.50.360 6 179 1.5E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_0995 d710b414b6c9ca7bb69b786e4619660a 179 Pfam PF02525 Flavodoxin-like fold 6 173 6.9E-38 T 14-10-2018 IPR003680 Flavodoxin-like fold ABED_0995 d710b414b6c9ca7bb69b786e4619660a 179 SUPERFAMILY SSF52218 6 179 6.52E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_0386 8226aca806ee0563a2d858e836df0f23 172 Pfam PF13673 Acetyltransferase (GNAT) domain 46 147 8.9E-16 T 14-10-2018 IPR000182 GNAT domain ABED_0386 8226aca806ee0563a2d858e836df0f23 172 Gene3D G3DSA:3.40.630.30 3 147 4.2E-19 T 14-10-2018 ABED_0386 8226aca806ee0563a2d858e836df0f23 172 SUPERFAMILY SSF55729 1 150 2.8E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0634 73a44be85bc89a375d2873333abdae3d 376 SUPERFAMILY SSF51735 2 357 1.28E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0634 73a44be85bc89a375d2873333abdae3d 376 PRINTS PR01713 Nucleotide sugar epimerase signature 278 293 2.6E-8 T 14-10-2018 ABED_0634 73a44be85bc89a375d2873333abdae3d 376 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.6E-8 T 14-10-2018 ABED_0634 73a44be85bc89a375d2873333abdae3d 376 PRINTS PR01713 Nucleotide sugar epimerase signature 318 335 2.6E-8 T 14-10-2018 ABED_0634 73a44be85bc89a375d2873333abdae3d 376 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 284 8.8E-45 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.623 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 Gene3D G3DSA:3.40.50.1980 234 350 1.6E-123 T 14-10-2018 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.4E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 2.4E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 2.4E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.4E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 2.4E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 2.4E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.4E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 2.4E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 4.2E-163 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 SUPERFAMILY SSF53720 31 428 1.88E-77 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 Pfam PF00815 Histidinol dehydrogenase 20 428 6.2E-169 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 Gene3D G3DSA:3.40.50.1980 31 232 1.6E-123 T 14-10-2018 ABED_0359 69a3bbcc0b3cf9bf6ab12ea6d307c9ca 430 PIRSF PIRSF000099 1 430 1.3E-170 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABED_1565 38b7babb9368b88f6d6f06afe34e1dd3 498 SUPERFAMILY SSF53383 177 493 3.02E-34 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1565 38b7babb9368b88f6d6f06afe34e1dd3 498 Gene3D G3DSA:3.90.1150.10 362 495 1.9E-13 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1565 38b7babb9368b88f6d6f06afe34e1dd3 498 Gene3D G3DSA:3.40.640.10 147 361 9.7E-27 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1565 38b7babb9368b88f6d6f06afe34e1dd3 498 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 179 493 2.3E-35 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABED_0057 d1278d040fc94a0e98ba6f08174f3cf0 360 Pfam PF04055 Radical SAM superfamily 119 284 2.0E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_0057 d1278d040fc94a0e98ba6f08174f3cf0 360 Gene3D G3DSA:1.10.150.530 8 63 4.8E-14 T 14-10-2018 ABED_0057 d1278d040fc94a0e98ba6f08174f3cf0 360 Gene3D G3DSA:3.20.20.70 64 341 9.5E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0057 d1278d040fc94a0e98ba6f08174f3cf0 360 PIRSF PIRSF006004 4 360 4.0E-130 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 ABED_0057 d1278d040fc94a0e98ba6f08174f3cf0 360 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 1 356 2.2E-139 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ABED_0057 d1278d040fc94a0e98ba6f08174f3cf0 360 SUPERFAMILY SSF102114 112 326 7.59E-13 T 14-10-2018 ABED_0057 d1278d040fc94a0e98ba6f08174f3cf0 360 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 6 357 69.548 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 Pfam PF02355 Protein export membrane protein 115 289 2.6E-62 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 88 279 3.0E-53 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 SUPERFAMILY SSF82866 75 290 1.01E-37 T 14-10-2018 ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 281 5.4E-81 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 PRINTS PR01755 Bacterial translocase SecF protein signature 150 164 6.1E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 6.1E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 PRINTS PR01755 Bacterial translocase SecF protein signature 230 245 6.1E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 PRINTS PR01755 Bacterial translocase SecF protein signature 198 216 6.1E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 Gene3D G3DSA:1.20.1640.10 107 303 2.3E-14 T 14-10-2018 ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 Pfam PF07549 SecD/SecF GG Motif 32 59 1.6E-11 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ABED_0371 386cec8ed57bbe2d5ee234e7d7ed7ad3 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 288 26.339 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ABED_1912 b89db5b58c5c489486f1381c8d203038 332 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 73 86 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 ABED_1912 b89db5b58c5c489486f1381c8d203038 332 Gene3D G3DSA:3.30.2340.10 163 290 6.3E-73 T 14-10-2018 ABED_1912 b89db5b58c5c489486f1381c8d203038 332 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 6 164 1.3E-43 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1912 b89db5b58c5c489486f1381c8d203038 332 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 185 323 5.5E-15 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1912 b89db5b58c5c489486f1381c8d203038 332 Gene3D G3DSA:3.30.2350.20 19 324 6.3E-73 T 14-10-2018 ABED_1912 b89db5b58c5c489486f1381c8d203038 332 SUPERFAMILY SSF55120 5 324 1.17E-70 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1912 b89db5b58c5c489486f1381c8d203038 332 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 2 331 23.906 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0967 1452297301d3c04973473d261c8fccd0 116 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 1.3E-43 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0967 1452297301d3c04973473d261c8fccd0 116 Gene3D G3DSA:3.90.1030.10 1 116 7.6E-42 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0967 1452297301d3c04973473d261c8fccd0 116 SUPERFAMILY SSF64263 1 116 7.06E-43 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0967 1452297301d3c04973473d261c8fccd0 116 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.87 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0967 1452297301d3c04973473d261c8fccd0 116 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0967 1452297301d3c04973473d261c8fccd0 116 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-30 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_2157 0c84ce852518022d320f3ad5cbdd965c 192 SUPERFAMILY SSF53328 3 191 5.36E-42 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_2157 0c84ce852518022d320f3ad5cbdd965c 192 Gene3D G3DSA:3.40.50.170 1 192 6.6E-54 T 14-10-2018 ABED_2157 0c84ce852518022d320f3ad5cbdd965c 192 Pfam PF00551 Formyl transferase 3 186 7.4E-38 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_2157 0c84ce852518022d320f3ad5cbdd965c 192 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 139 162 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_1355 f466c46566b35d1e8919a9c32961ed15 832 SUPERFAMILY SSF53448 396 657 3.09E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1355 f466c46566b35d1e8919a9c32961ed15 832 Gene3D G3DSA:3.20.20.80 59 288 1.4E-9 T 14-10-2018 ABED_1355 f466c46566b35d1e8919a9c32961ed15 832 Pfam PF13641 Glycosyltransferase like family 2 404 630 4.4E-28 T 14-10-2018 ABED_1355 f466c46566b35d1e8919a9c32961ed15 832 Gene3D G3DSA:3.90.550.10 392 614 7.2E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1355 f466c46566b35d1e8919a9c32961ed15 832 Pfam PF00332 Glycosyl hydrolases family 17 204 286 8.5E-9 T 14-10-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 ABED_1355 f466c46566b35d1e8919a9c32961ed15 832 SUPERFAMILY SSF51445 25 285 1.3E-42 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily ABED_0653 911b373bf46268db3ab919e5f44111a5 227 Gene3D G3DSA:3.30.1150.10 72 227 9.1E-23 T 14-10-2018 ABED_0653 911b373bf46268db3ab919e5f44111a5 227 SUPERFAMILY SSF74653 124 227 4.71E-17 T 14-10-2018 ABED_0653 911b373bf46268db3ab919e5f44111a5 227 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 150 227 2.1E-12 T 14-10-2018 IPR006260 TonB/TolA, C-terminal ABED_0653 911b373bf46268db3ab919e5f44111a5 227 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 148 225 7.7E-14 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 ABED_0653 911b373bf46268db3ab919e5f44111a5 227 PRINTS PR01374 Gram-negative bacterial tonB protein signature 143 164 7.1E-8 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ABED_0653 911b373bf46268db3ab919e5f44111a5 227 PRINTS PR01374 Gram-negative bacterial tonB protein signature 164 182 7.1E-8 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ABED_0653 911b373bf46268db3ab919e5f44111a5 227 PRINTS PR01374 Gram-negative bacterial tonB protein signature 58 68 7.1E-8 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ABED_0242 f404d70c608a10fc63e25b1d9805d960 396 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 217 254 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_0242 f404d70c608a10fc63e25b1d9805d960 396 Gene3D G3DSA:3.40.640.10 55 299 5.4E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0242 f404d70c608a10fc63e25b1d9805d960 396 PIRSF PIRSF000521 162 394 1.8E-25 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_0242 f404d70c608a10fc63e25b1d9805d960 396 PIRSF PIRSF000521 1 162 1.1E-4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_0242 f404d70c608a10fc63e25b1d9805d960 396 Pfam PF00202 Aminotransferase class-III 20 391 5.2E-89 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_0242 f404d70c608a10fc63e25b1d9805d960 396 Gene3D G3DSA:3.90.1150.10 8 382 5.4E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0242 f404d70c608a10fc63e25b1d9805d960 396 SUPERFAMILY SSF53383 10 394 3.71E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1626 7dfd90b734238f8b58c70802c56d2d9a 335 Gene3D G3DSA:3.40.50.720 13 310 1.3E-84 T 14-10-2018 ABED_1626 7dfd90b734238f8b58c70802c56d2d9a 335 Gene3D G3DSA:3.90.25.10 189 320 1.3E-84 T 14-10-2018 ABED_1626 7dfd90b734238f8b58c70802c56d2d9a 335 SUPERFAMILY SSF51735 6 329 2.91E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1626 7dfd90b734238f8b58c70802c56d2d9a 335 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 13 328 4.1E-101 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 ABED_1626 7dfd90b734238f8b58c70802c56d2d9a 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 257 1.2E-38 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABED_0498 599343f17c710e861f6de91b29e8071e 495 Pfam PF01384 Phosphate transporter family 33 480 6.6E-78 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ABED_0932 22c6605f6613a8f777ce890c503e2dfe 318 SMART SM00859 4 105 5.1E-17 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABED_0932 22c6605f6613a8f777ce890c503e2dfe 318 SUPERFAMILY SSF55347 116 287 6.76E-33 T 14-10-2018 ABED_0932 22c6605f6613a8f777ce890c503e2dfe 318 SUPERFAMILY SSF51735 1 130 1.4E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0932 22c6605f6613a8f777ce890c503e2dfe 318 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 2 306 1.7E-113 T 14-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABED_0932 22c6605f6613a8f777ce890c503e2dfe 318 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 35 105 5.7E-12 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABED_0932 22c6605f6613a8f777ce890c503e2dfe 318 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 306 46.261 T 14-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABED_0932 22c6605f6613a8f777ce890c503e2dfe 318 Gene3D G3DSA:3.40.50.720 32 308 3.8E-57 T 14-10-2018 ABED_0932 22c6605f6613a8f777ce890c503e2dfe 318 Gene3D G3DSA:3.30.360.10 115 291 3.8E-57 T 14-10-2018 ABED_2027 47b8bb3ba94d0caac0b0ed08aef1e311 347 SUPERFAMILY SSF53756 16 258 1.88E-6 T 14-10-2018 ABED_2027 47b8bb3ba94d0caac0b0ed08aef1e311 347 Pfam PF02684 Lipid-A-disaccharide synthetase 4 336 1.1E-77 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 ABED_2027 47b8bb3ba94d0caac0b0ed08aef1e311 347 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 315 5.3E-81 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 ABED_0687 ccc044e6774d47c512e6221091eecdea 233 Pfam PF05573 NosL 103 230 3.7E-33 T 14-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL ABED_0687 ccc044e6774d47c512e6221091eecdea 233 Gene3D G3DSA:3.30.70.2050 185 232 4.5E-10 T 14-10-2018 ABED_0687 ccc044e6774d47c512e6221091eecdea 233 SUPERFAMILY SSF160387 128 232 7.32E-27 T 14-10-2018 ABED_2125 71321f7b5471326200b5cfc4556f5b00 314 Pfam PF09084 NMT1/THI5 like 56 186 3.7E-12 T 14-10-2018 IPR015168 SsuA/THI5-like ABED_2125 71321f7b5471326200b5cfc4556f5b00 314 SMART SM00062 27 249 1.0E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABED_2125 71321f7b5471326200b5cfc4556f5b00 314 Gene3D G3DSA:3.40.190.10 28 300 1.5E-103 T 14-10-2018 ABED_2125 71321f7b5471326200b5cfc4556f5b00 314 Gene3D G3DSA:3.40.190.10 108 207 1.5E-103 T 14-10-2018 ABED_2125 71321f7b5471326200b5cfc4556f5b00 314 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 28 309 6.5E-73 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 ABED_2125 71321f7b5471326200b5cfc4556f5b00 314 SUPERFAMILY SSF53850 26 252 4.01E-49 T 14-10-2018 ABED_2125 71321f7b5471326200b5cfc4556f5b00 314 Gene3D G3DSA:1.10.8.450 238 270 1.5E-103 T 14-10-2018 ABED_1451 48bf9a94e4e3ced7128fbcc5804f514b 195 Pfam PF04264 YceI-like domain 54 190 1.2E-7 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_0488 1ee2e2e11f57966229167dada2b85159 198 SUPERFAMILY SSF48452 5 147 1.55E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0488 1ee2e2e11f57966229167dada2b85159 198 Gene3D G3DSA:1.25.40.10 2 89 3.9E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0642 d9fd34105693bbe245c73e4ec4e75b7f 401 Gene3D G3DSA:3.40.50.2000 12 208 1.6E-6 T 14-10-2018 ABED_0642 d9fd34105693bbe245c73e4ec4e75b7f 401 Pfam PF00534 Glycosyl transferases group 1 215 378 1.2E-16 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 ABED_0642 d9fd34105693bbe245c73e4ec4e75b7f 401 SUPERFAMILY SSF53756 21 399 3.66E-30 T 14-10-2018 ABED_0642 d9fd34105693bbe245c73e4ec4e75b7f 401 Gene3D G3DSA:3.40.50.2000 209 380 3.1E-21 T 14-10-2018 ABED_1153 0c892ba8bf5fe03f38b9eb3d2fd87402 70 Gene3D G3DSA:2.30.170.10 34 70 1.5E-6 T 14-10-2018 ABED_1153 0c892ba8bf5fe03f38b9eb3d2fd87402 70 Pfam PF02069 Prokaryotic metallothionein 41 68 1.1E-6 T 14-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 ABED_1153 0c892ba8bf5fe03f38b9eb3d2fd87402 70 SUPERFAMILY SSF57868 41 69 6.12E-6 T 14-10-2018 IPR017854 Metallothionein domain superfamily GO:0046872 ABED_0465 4d10e75290a1f9360fb720763276d244 407 Gene3D G3DSA:3.20.20.140 61 361 1.9E-150 T 14-10-2018 ABED_0465 4d10e75290a1f9360fb720763276d244 407 SUPERFAMILY SSF51338 5 73 2.04E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABED_0465 4d10e75290a1f9360fb720763276d244 407 Gene3D G3DSA:2.30.40.10 18 404 1.9E-150 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABED_0465 4d10e75290a1f9360fb720763276d244 407 SUPERFAMILY SSF51556 59 359 1.7E-54 T 14-10-2018 IPR032466 Metal-dependent hydrolase ABED_0465 4d10e75290a1f9360fb720763276d244 407 Pfam PF01979 Amidohydrolase family 56 405 2.3E-40 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABED_2145 c0adaba667e3dfb2eb34041111fe1de6 168 Pfam PF09626 Dihaem cytochrome c 31 152 8.0E-43 T 14-10-2018 IPR018588 Dihaem cytochrome c ABED_1395 d0535d559b9478fdfd76819618b851a6 735 SUPERFAMILY SSF53706 1 389 5.37E-127 T 14-10-2018 ABED_1395 d0535d559b9478fdfd76819618b851a6 735 Gene3D G3DSA:2.40.40.20 549 735 5.1E-29 T 14-10-2018 ABED_1395 d0535d559b9478fdfd76819618b851a6 735 Gene3D G3DSA:3.40.228.10 1 186 9.9E-105 T 14-10-2018 ABED_1395 d0535d559b9478fdfd76819618b851a6 735 SUPERFAMILY SSF50692 543 735 6.56E-28 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABED_1395 d0535d559b9478fdfd76819618b851a6 735 Pfam PF00384 Molybdopterin oxidoreductase 2 356 3.4E-43 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1395 d0535d559b9478fdfd76819618b851a6 735 Gene3D G3DSA:3.40.50.740 187 404 9.9E-105 T 14-10-2018 ABED_1395 d0535d559b9478fdfd76819618b851a6 735 Pfam PF01568 Molydopterin dinucleotide binding domain 603 726 2.0E-10 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABED_1120 a21355b145795e5710f24313ecde4530 350 Pfam PF00589 Phage integrase family 168 340 6.8E-35 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABED_1120 a21355b145795e5710f24313ecde4530 350 Hamap MF_02054 Tyrosine recombinase XerH [xerH]. 1 350 50.067 T 14-10-2018 IPR033683 Tyrosine recombinase XerH ABED_1120 a21355b145795e5710f24313ecde4530 350 SUPERFAMILY SSF56349 163 348 2.0E-42 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABED_1120 a21355b145795e5710f24313ecde4530 350 Gene3D G3DSA:1.10.443.10 167 347 4.3E-44 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABED_0538 50df7a5b9a0b2f46f4d87af58b2b2a3b 64 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 3 63 6.4E-32 T 14-10-2018 IPR019240 Protein of unknown function DUF2196 ABED_0538 50df7a5b9a0b2f46f4d87af58b2b2a3b 64 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 3 63 5.2E-35 T 14-10-2018 IPR019240 Protein of unknown function DUF2196 ABED_1127 4b2795dfc753515d85237ba0a3f9c8c8 165 Gene3D G3DSA:3.90.79.10 6 163 2.2E-34 T 14-10-2018 ABED_1127 4b2795dfc753515d85237ba0a3f9c8c8 165 SUPERFAMILY SSF55811 13 160 1.35E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABED_1127 4b2795dfc753515d85237ba0a3f9c8c8 165 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABED_1127 4b2795dfc753515d85237ba0a3f9c8c8 165 Pfam PF00293 NUDIX domain 17 153 1.3E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABED_1127 4b2795dfc753515d85237ba0a3f9c8c8 165 PRINTS PR00502 NUDIX hydrolase family signature 61 76 1.5E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABED_1127 4b2795dfc753515d85237ba0a3f9c8c8 165 PRINTS PR00502 NUDIX hydrolase family signature 47 61 1.5E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABED_0365 8e2d5626cab3578e946f632cab11d828 324 SUPERFAMILY SSF81891 75 312 2.22E-32 T 14-10-2018 ABED_0365 8e2d5626cab3578e946f632cab11d828 324 Gene3D G3DSA:1.10.3090.10 77 319 5.3E-38 T 14-10-2018 ABED_0365 8e2d5626cab3578e946f632cab11d828 324 SUPERFAMILY SSF81301 2 74 2.51E-13 T 14-10-2018 ABED_0365 8e2d5626cab3578e946f632cab11d828 324 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 103 158 4.2E-9 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ABED_0365 8e2d5626cab3578e946f632cab11d828 324 Gene3D G3DSA:3.30.460.10 1 76 7.7E-15 T 14-10-2018 ABED_0365 8e2d5626cab3578e946f632cab11d828 324 Pfam PF01743 Poly A polymerase head domain 5 76 3.7E-13 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ABED_0846 f90738930783e9a113e6c3b24a8d9eb6 266 SUPERFAMILY SSF161098 58 244 2.13E-16 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0846 f90738930783e9a113e6c3b24a8d9eb6 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 255 2.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_0846 f90738930783e9a113e6c3b24a8d9eb6 266 Gene3D G3DSA:1.10.3720.10 53 261 3.1E-12 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0133 4e2d4f7f74c76cbe359abeb16206c64a 331 Gene3D G3DSA:3.30.1330.10 3 166 2.6E-63 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_0133 4e2d4f7f74c76cbe359abeb16206c64a 331 Gene3D G3DSA:3.90.650.10 167 331 1.7E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_0133 4e2d4f7f74c76cbe359abeb16206c64a 331 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 326 8.0E-29 T 14-10-2018 IPR010918 PurM-like, C-terminal domain ABED_0133 4e2d4f7f74c76cbe359abeb16206c64a 331 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 320 2.8E-126 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_0133 4e2d4f7f74c76cbe359abeb16206c64a 331 SUPERFAMILY SSF55326 3 165 9.77E-47 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_0133 4e2d4f7f74c76cbe359abeb16206c64a 331 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 160 5.3E-11 T 14-10-2018 IPR016188 PurM-like, N-terminal domain ABED_0133 4e2d4f7f74c76cbe359abeb16206c64a 331 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 331 41.877 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_0133 4e2d4f7f74c76cbe359abeb16206c64a 331 SUPERFAMILY SSF56042 170 328 1.94E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 PRINTS PR00721 Stomatin signature 111 128 6.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 PRINTS PR00721 Stomatin signature 174 195 6.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 PRINTS PR00721 Stomatin signature 76 97 6.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 PRINTS PR00721 Stomatin signature 131 154 6.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 PRINTS PR00721 Stomatin signature 155 173 6.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 Gene3D G3DSA:3.30.479.30 49 181 2.1E-43 T 14-10-2018 ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 SUPERFAMILY SSF117892 52 186 3.14E-38 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 Pfam PF01145 SPFH domain / Band 7 family 25 196 4.3E-33 T 14-10-2018 IPR001107 Band 7 domain ABED_1034 d494cbb378346ff8bf64177f1ceeec4a 309 SMART SM00244 21 179 8.5E-49 T 14-10-2018 IPR001107 Band 7 domain ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 Pfam PF01327 Polypeptide deformylase 3 153 4.9E-47 T 14-10-2018 IPR023635 Peptide deformylase ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 PRINTS PR01576 Peptide deformylase signature 93 104 3.4E-32 T 14-10-2018 IPR023635 Peptide deformylase ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 PRINTS PR01576 Peptide deformylase signature 124 153 3.4E-32 T 14-10-2018 IPR023635 Peptide deformylase ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 PRINTS PR01576 Peptide deformylase signature 32 61 3.4E-32 T 14-10-2018 IPR023635 Peptide deformylase ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 PRINTS PR01576 Peptide deformylase signature 105 123 3.4E-32 T 14-10-2018 IPR023635 Peptide deformylase ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 Gene3D G3DSA:3.90.45.10 1 163 2.5E-56 T 14-10-2018 IPR036821 Peptide deformylase superfamily ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 Hamap MF_00163 Peptide deformylase [def]. 1 166 26.936 T 14-10-2018 IPR023635 Peptide deformylase ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 165 9.8E-51 T 14-10-2018 IPR023635 Peptide deformylase ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 SUPERFAMILY SSF56420 1 167 1.31E-53 T 14-10-2018 IPR036821 Peptide deformylase superfamily ABED_1554 e63f0fad3b6910b0cd2dac12ce988ce5 171 PIRSF PIRSF004749 1 171 9.8E-46 T 14-10-2018 IPR023635 Peptide deformylase ABED_2106 1ed5bd0ba4b08967fa30fee456044d83 829 Gene3D G3DSA:3.40.50.11290 217 314 8.8E-35 T 14-10-2018 ABED_2106 1ed5bd0ba4b08967fa30fee456044d83 829 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 505 824 1.8E-48 T 14-10-2018 IPR007296 Domain of unknown function DUF403 ABED_2106 1ed5bd0ba4b08967fa30fee456044d83 829 SUPERFAMILY SSF56059 21 457 1.73E-20 T 14-10-2018 ABED_2106 1ed5bd0ba4b08967fa30fee456044d83 829 Pfam PF14403 Circularly permuted ATP-grasp type 2 79 455 2.6E-133 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 ABED_2106 1ed5bd0ba4b08967fa30fee456044d83 829 Gene3D G3DSA:3.30.1490.270 351 410 1.5E-6 T 14-10-2018 ABED_0159 e04fd2f420beb1da4312605c07c088f2 259 Gene3D G3DSA:3.20.20.70 2 259 1.2E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0159 e04fd2f420beb1da4312605c07c088f2 259 SUPERFAMILY SSF110399 3 244 6.67E-84 T 14-10-2018 ABED_0159 e04fd2f420beb1da4312605c07c088f2 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 252 6.4E-105 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ABED_0159 e04fd2f420beb1da4312605c07c088f2 259 Hamap MF_00443 Thiazole synthase [thiG]. 4 258 42.046 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ABED_1628 1d4d3f77f54e7b73a7775e7cf6ee977a 189 Gene3D G3DSA:3.40.50.10490 2 187 8.4E-80 T 14-10-2018 ABED_1628 1d4d3f77f54e7b73a7775e7cf6ee977a 189 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 187 39.631 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 ABED_1628 1d4d3f77f54e7b73a7775e7cf6ee977a 189 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 183 1.3E-72 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 ABED_1628 1d4d3f77f54e7b73a7775e7cf6ee977a 189 SUPERFAMILY SSF53697 2 187 3.12E-59 T 14-10-2018 ABED_1628 1d4d3f77f54e7b73a7775e7cf6ee977a 189 Pfam PF13580 SIS domain 12 144 1.2E-35 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABED_1225 eeb11376853549d74d2a5e3a3a03415c 927 Pfam PF13116 Protein of unknown function 151 420 5.8E-41 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 ABED_1225 eeb11376853549d74d2a5e3a3a03415c 927 Pfam PF13109 AsmA-like C-terminal region 682 903 1.6E-43 T 14-10-2018 IPR039441 AsmA-like C-terminal region ABED_1584 7b30c307ab1dd70d2d2a5594b991e53a 301 Pfam PF04116 Fatty acid hydroxylase superfamily 114 259 9.1E-27 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 ABED_1937 edcb1b2ce7fb58e20763b722ab3a5846 316 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 306 5.7E-56 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 ABED_1937 edcb1b2ce7fb58e20763b722ab3a5846 316 SUPERFAMILY SSF48179 186 305 6.8E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABED_1937 edcb1b2ce7fb58e20763b722ab3a5846 316 SUPERFAMILY SSF51735 1 140 4.66E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1937 edcb1b2ce7fb58e20763b722ab3a5846 316 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 156 7.3E-24 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain ABED_1937 edcb1b2ce7fb58e20763b722ab3a5846 316 Gene3D G3DSA:1.10.1040.10 186 316 1.2E-28 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABED_1937 edcb1b2ce7fb58e20763b722ab3a5846 316 Gene3D G3DSA:3.40.50.720 1 184 1.1E-33 T 14-10-2018 ABED_1937 edcb1b2ce7fb58e20763b722ab3a5846 316 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 186 305 7.2E-21 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain ABED_1398 07b20c37afcedf891e4783a4b9537dc2 203 SUPERFAMILY SSF89155 5 199 1.83E-29 T 14-10-2018 IPR036411 TorD-like superfamily ABED_1398 07b20c37afcedf891e4783a4b9537dc2 203 Gene3D G3DSA:1.10.3480.10 2 203 1.3E-18 T 14-10-2018 ABED_1398 07b20c37afcedf891e4783a4b9537dc2 203 Pfam PF02613 Nitrate reductase delta subunit 43 164 1.8E-16 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone ABED_1999 ec4ff94e02650c3917605bfcad2bcb85 432 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 425 2.0E-143 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ABED_1999 ec4ff94e02650c3917605bfcad2bcb85 432 Gene3D G3DSA:3.90.550.10 3 221 2.8E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1999 ec4ff94e02650c3917605bfcad2bcb85 432 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 425 33.363 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ABED_1999 ec4ff94e02650c3917605bfcad2bcb85 432 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 368 401 1.7E-6 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_1999 ec4ff94e02650c3917605bfcad2bcb85 432 Gene3D G3DSA:2.160.10.10 222 422 1.6E-37 T 14-10-2018 ABED_1999 ec4ff94e02650c3917605bfcad2bcb85 432 SUPERFAMILY SSF53448 5 246 1.29E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1999 ec4ff94e02650c3917605bfcad2bcb85 432 SUPERFAMILY SSF51161 235 410 1.3E-29 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_1999 ec4ff94e02650c3917605bfcad2bcb85 432 Pfam PF12804 MobA-like NTP transferase domain 7 115 2.2E-14 T 14-10-2018 IPR025877 MobA-like NTP transferase ABED_1876 999d85e85431ae74949ace0aab5f0717 911 Gene3D G3DSA:3.40.50.300 2 180 9.1E-27 T 14-10-2018 ABED_1876 999d85e85431ae74949ace0aab5f0717 911 SUPERFAMILY SSF52540 5 705 6.07E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1876 999d85e85431ae74949ace0aab5f0717 911 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 388 1.1E-45 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABED_1876 999d85e85431ae74949ace0aab5f0717 911 Gene3D G3DSA:3.90.320.10 717 908 2.9E-5 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ABED_1876 999d85e85431ae74949ace0aab5f0717 911 Pfam PF13361 UvrD-like helicase C-terminal domain 570 704 6.5E-11 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABED_1876 999d85e85431ae74949ace0aab5f0717 911 Pfam PF13361 UvrD-like helicase C-terminal domain 401 528 2.6E-8 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABED_1876 999d85e85431ae74949ace0aab5f0717 911 SUPERFAMILY SSF52980 737 903 5.25E-8 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABED_1876 999d85e85431ae74949ace0aab5f0717 911 Gene3D G3DSA:3.40.50.300 191 395 3.8E-22 T 14-10-2018 ABED_1027 670c60e8d801112f9eee26768350f3e0 154 Gene3D G3DSA:3.40.1280.10 1 154 1.4E-56 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABED_1027 670c60e8d801112f9eee26768350f3e0 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 152 29.577 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ABED_1027 670c60e8d801112f9eee26768350f3e0 154 Pfam PF00588 SpoU rRNA Methylase family 2 143 1.6E-32 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABED_1027 670c60e8d801112f9eee26768350f3e0 154 SUPERFAMILY SSF75217 2 149 3.99E-36 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases ABED_1027 670c60e8d801112f9eee26768350f3e0 154 PIRSF PIRSF029256 1 154 1.2E-55 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ABED_1797 369a2d9848c6245446a78f1548dad3d0 155 SUPERFAMILY SSF47973 2 151 9.68E-58 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ABED_1797 369a2d9848c6245446a78f1548dad3d0 155 PIRSF PIRSF002122 2 155 1.7E-58 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 ABED_1797 369a2d9848c6245446a78f1548dad3d0 155 Pfam PF00177 Ribosomal protein S7p/S5e 2 148 3.9E-62 T 14-10-2018 IPR023798 Ribosomal protein S7 domain ABED_1797 369a2d9848c6245446a78f1548dad3d0 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 155 1.1E-68 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ABED_1797 369a2d9848c6245446a78f1548dad3d0 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1797 369a2d9848c6245446a78f1548dad3d0 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.435 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ABED_1797 369a2d9848c6245446a78f1548dad3d0 155 Gene3D G3DSA:1.10.455.10 1 155 4.9E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ABED_2081 68ec65bfd6c6d32c0ed1c853b9df93d5 230 SUPERFAMILY SSF53335 4 131 2.15E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_2081 68ec65bfd6c6d32c0ed1c853b9df93d5 230 Pfam PF08242 Methyltransferase domain 40 127 1.3E-8 T 14-10-2018 IPR013217 Methyltransferase type 12 ABED_2081 68ec65bfd6c6d32c0ed1c853b9df93d5 230 Gene3D G3DSA:3.40.50.150 2 217 3.7E-18 T 14-10-2018 ABED_0220 e0dd13de604e0016de6152c7bbded3f8 617 SUPERFAMILY SSF50249 194 554 5.71E-99 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0220 e0dd13de604e0016de6152c7bbded3f8 617 Pfam PF00773 RNB domain 199 516 7.9E-82 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ABED_0220 e0dd13de604e0016de6152c7bbded3f8 617 ProSitePatterns PS01175 Ribonuclease II family signature. 487 511 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site ABED_0220 e0dd13de604e0016de6152c7bbded3f8 617 SMART SM00955 199 520 2.1E-120 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ABED_1154 f369cd36561db69427ba48ff6280a3f4 194 Pfam PF02527 rRNA small subunit methyltransferase G 20 175 3.4E-41 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABED_1154 f369cd36561db69427ba48ff6280a3f4 194 SUPERFAMILY SSF53335 2 175 1.77E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1154 f369cd36561db69427ba48ff6280a3f4 194 PIRSF PIRSF003078 1 193 4.7E-45 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABED_1154 f369cd36561db69427ba48ff6280a3f4 194 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 10 190 22.157 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABED_1154 f369cd36561db69427ba48ff6280a3f4 194 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 22 175 1.1E-40 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABED_1154 f369cd36561db69427ba48ff6280a3f4 194 Gene3D G3DSA:3.40.50.150 1 192 1.9E-41 T 14-10-2018 ABED_1844 7b9f2e21cee5f6b154fd26d430a0e1a5 328 Gene3D G3DSA:3.90.1640.10 14 210 3.9E-49 T 14-10-2018 ABED_1844 7b9f2e21cee5f6b154fd26d430a0e1a5 328 Pfam PF02272 DHHA1 domain 196 317 1.9E-10 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABED_1844 7b9f2e21cee5f6b154fd26d430a0e1a5 328 Pfam PF01368 DHH family 29 165 1.2E-16 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABED_1844 7b9f2e21cee5f6b154fd26d430a0e1a5 328 Gene3D G3DSA:3.10.310.30 211 328 1.8E-26 T 14-10-2018 ABED_1844 7b9f2e21cee5f6b154fd26d430a0e1a5 328 SUPERFAMILY SSF64182 27 312 1.7E-62 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily ABED_2061 87544fcf1a63b68b13b5fd35677fb33d 290 Pfam PF04991 LicD family 118 186 1.3E-14 T 14-10-2018 IPR007074 LicD family ABED_2061 87544fcf1a63b68b13b5fd35677fb33d 290 Gene3D G3DSA:3.40.50.720 1 118 8.2E-7 T 14-10-2018 ABED_0522 769ec37cf55c8ee1f1d68bd7b3f65d57 96 Gene3D G3DSA:1.10.760.10 18 96 3.6E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0522 769ec37cf55c8ee1f1d68bd7b3f65d57 96 SUPERFAMILY SSF46626 23 94 1.38E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0522 769ec37cf55c8ee1f1d68bd7b3f65d57 96 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 94 2.8E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_0595 5556356c50e5fc81b41cc54e03c4a4a4 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 88 1.0E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABED_0595 5556356c50e5fc81b41cc54e03c4a4a4 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 176 1.2E-46 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABED_0595 5556356c50e5fc81b41cc54e03c4a4a4 178 Gene3D G3DSA:2.40.240.10 2 89 5.0E-18 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABED_0595 5556356c50e5fc81b41cc54e03c4a4a4 178 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 178 20.881 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABED_0595 5556356c50e5fc81b41cc54e03c4a4a4 178 Pfam PF01386 Ribosomal L25p family 2 87 3.0E-18 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABED_0595 5556356c50e5fc81b41cc54e03c4a4a4 178 SUPERFAMILY SSF50715 6 176 7.46E-44 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABED_0595 5556356c50e5fc81b41cc54e03c4a4a4 178 Gene3D G3DSA:2.170.120.20 92 178 2.1E-17 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal ABED_0595 5556356c50e5fc81b41cc54e03c4a4a4 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 177 1.1E-17 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain ABED_0480 61a5e94792b91aa39859a5324e9dcbba 589 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 493 513 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site ABED_0480 61a5e94792b91aa39859a5324e9dcbba 589 Pfam PF00474 Sodium:solute symporter family 390 511 2.3E-16 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABED_0480 61a5e94792b91aa39859a5324e9dcbba 589 Pfam PF00474 Sodium:solute symporter family 33 305 8.0E-31 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABED_0480 61a5e94792b91aa39859a5324e9dcbba 589 Gene3D G3DSA:1.20.1730.10 351 572 2.0E-20 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily ABED_0480 61a5e94792b91aa39859a5324e9dcbba 589 Gene3D G3DSA:1.20.1730.10 22 336 1.2E-27 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily ABED_0480 61a5e94792b91aa39859a5324e9dcbba 589 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 580 6.7E-170 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily ABED_2064 bab7d1357a597559ed61c08878d13934 307 Pfam PF00700 Bacterial flagellin C-terminal helical region 222 306 1.8E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABED_2064 bab7d1357a597559ed61c08878d13934 307 Gene3D G3DSA:1.10.8.410 259 307 2.1E-18 T 14-10-2018 ABED_2064 bab7d1357a597559ed61c08878d13934 307 PRINTS PR00207 Flagellin signature 109 132 9.2E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABED_2064 bab7d1357a597559ed61c08878d13934 307 PRINTS PR00207 Flagellin signature 35 52 9.2E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABED_2064 bab7d1357a597559ed61c08878d13934 307 PRINTS PR00207 Flagellin signature 74 93 9.2E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABED_2064 bab7d1357a597559ed61c08878d13934 307 Gene3D G3DSA:1.20.1330.10 48 258 8.9E-27 T 14-10-2018 ABED_2064 bab7d1357a597559ed61c08878d13934 307 SUPERFAMILY SSF64518 1 307 1.31E-65 T 14-10-2018 ABED_2064 bab7d1357a597559ed61c08878d13934 307 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 2.0E-31 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABED_0415 312f2799e880659d6233dccdda275d09 207 Pfam PF00005 ABC transporter 17 157 3.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0415 312f2799e880659d6233dccdda275d09 207 Gene3D G3DSA:3.40.50.300 1 207 1.7E-62 T 14-10-2018 ABED_0415 312f2799e880659d6233dccdda275d09 207 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0415 312f2799e880659d6233dccdda275d09 207 SMART SM00382 26 204 2.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0415 312f2799e880659d6233dccdda275d09 207 SUPERFAMILY SSF52540 1 206 2.9E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0733 d933dc089f09715a2d3058b6ee132cdb 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 559 712 1.2E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0733 d933dc089f09715a2d3058b6ee132cdb 753 Gene3D G3DSA:1.10.287.950 446 743 4.7E-58 T 14-10-2018 ABED_0733 d933dc089f09715a2d3058b6ee132cdb 753 Pfam PF17201 Cache 3/Cache 2 fusion domain 34 318 6.5E-93 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain ABED_0733 d933dc089f09715a2d3058b6ee132cdb 753 SUPERFAMILY SSF103190 112 209 3.4E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABED_0733 d933dc089f09715a2d3058b6ee132cdb 753 SUPERFAMILY SSF58104 370 744 4.97E-54 T 14-10-2018 ABED_0733 d933dc089f09715a2d3058b6ee132cdb 753 SMART SM00283 498 734 2.8E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0733 d933dc089f09715a2d3058b6ee132cdb 753 Gene3D G3DSA:3.30.450.20 179 322 7.6E-21 T 14-10-2018 ABED_1684 f3ba007642e99e4e34d26e25d34d1d69 74 SUPERFAMILY SSF50037 4 72 9.16E-19 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal ABED_1684 f3ba007642e99e4e34d26e25d34d1d69 74 Pfam PF04023 FeoA domain 1 72 9.5E-16 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ABED_1684 f3ba007642e99e4e34d26e25d34d1d69 74 Gene3D G3DSA:2.30.30.90 1 74 2.4E-22 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain ABED_1684 f3ba007642e99e4e34d26e25d34d1d69 74 SMART SM00899 1 73 3.9E-19 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ABED_1087 6e5f3dbef3c55643216cd1960e4aafea 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 51 1.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_1087 6e5f3dbef3c55643216cd1960e4aafea 192 Pfam PF16925 Bacterial transcriptional repressor C-terminal 78 168 1.7E-13 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ABED_1087 6e5f3dbef3c55643216cd1960e4aafea 192 Gene3D G3DSA:1.10.357.10 1 190 1.5E-36 T 14-10-2018 ABED_1087 6e5f3dbef3c55643216cd1960e4aafea 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABED_1087 6e5f3dbef3c55643216cd1960e4aafea 192 SUPERFAMILY SSF48498 80 183 1.71E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABED_1087 6e5f3dbef3c55643216cd1960e4aafea 192 SUPERFAMILY SSF46689 3 69 2.62E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_1676 1e6b4f8d54a8cc274a27bccffd9805a5 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 409 1.2E-96 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ABED_1676 1e6b4f8d54a8cc274a27bccffd9805a5 422 Gene3D G3DSA:3.65.10.10 6 416 6.0E-154 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABED_1676 1e6b4f8d54a8cc274a27bccffd9805a5 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 2.5E-170 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_1676 1e6b4f8d54a8cc274a27bccffd9805a5 422 Gene3D G3DSA:3.65.10.10 21 232 6.0E-154 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABED_1676 1e6b4f8d54a8cc274a27bccffd9805a5 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 42.578 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABED_1676 1e6b4f8d54a8cc274a27bccffd9805a5 422 SUPERFAMILY SSF55205 1 419 7.03E-127 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ABED_1940 24224aa133e9b64d1d68cff99ece6b76 217 Gene3D G3DSA:2.60.120.10 7 142 2.8E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_1940 24224aa133e9b64d1d68cff99ece6b76 217 Gene3D G3DSA:1.10.10.10 143 216 2.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1940 24224aa133e9b64d1d68cff99ece6b76 217 SUPERFAMILY SSF46785 149 213 7.58E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1940 24224aa133e9b64d1d68cff99ece6b76 217 SMART SM00100 11 129 2.2E-6 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain ABED_1940 24224aa133e9b64d1d68cff99ece6b76 217 SMART SM00419 159 205 2.2E-7 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABED_1940 24224aa133e9b64d1d68cff99ece6b76 217 Pfam PF13545 Crp-like helix-turn-helix domain 149 211 7.9E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABED_1940 24224aa133e9b64d1d68cff99ece6b76 217 SUPERFAMILY SSF51206 6 139 1.83E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like ABED_1940 24224aa133e9b64d1d68cff99ece6b76 217 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 2.0E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 Gene3D G3DSA:1.20.120.430 122 446 2.9E-85 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 Gene3D G3DSA:3.30.1360.120 2 121 5.2E-43 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 360 1.1E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 Pfam PF01926 50S ribosome-binding GTPase 218 334 1.4E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 SUPERFAMILY SSF103025 4 120 2.51E-41 T 14-10-2018 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 Pfam PF12631 MnmE helical domain 123 443 2.8E-38 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 Gene3D G3DSA:3.40.50.300 217 375 2.9E-85 T 14-10-2018 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 446 30.95 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 446 1.5E-120 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 PRINTS PR00449 Transforming protein P21 ras signature 324 337 1.1E-5 T 14-10-2018 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 PRINTS PR00449 Transforming protein P21 ras signature 217 238 1.1E-5 T 14-10-2018 ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 SUPERFAMILY SSF52540 73 352 1.7E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1504 65388ddcf84b9cd3b78e4eae02535153 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 6.7E-39 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 ABED_1227 474de0091d688cdfa00c4c197dba53d3 730 Gene3D G3DSA:3.40.718.10 385 644 4.5E-14 T 14-10-2018 ABED_1227 474de0091d688cdfa00c4c197dba53d3 730 SUPERFAMILY SSF53659 2 730 0.0 T 14-10-2018 ABED_1227 474de0091d688cdfa00c4c197dba53d3 730 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 729 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ABED_1227 474de0091d688cdfa00c4c197dba53d3 730 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 729 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ABED_1227 474de0091d688cdfa00c4c197dba53d3 730 PIRSF PIRSF009407 1 730 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ABED_0881 87898af1e1328b85309bcbc4a38cda59 460 PIRSF PIRSF500217 1 460 7.0E-125 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 ABED_0881 87898af1e1328b85309bcbc4a38cda59 460 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 126 356 1.3E-27 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT ABED_0881 87898af1e1328b85309bcbc4a38cda59 460 PIRSF PIRSF016636 1 460 4.8E-126 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB ABED_1294 6f726fa7ca4f8b352d6b608b71eb7f7c 94 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 85 8.3E-20 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABED_1294 6f726fa7ca4f8b352d6b608b71eb7f7c 94 SUPERFAMILY SSF160544 10 89 3.92E-24 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ABED_1294 6f726fa7ca4f8b352d6b608b71eb7f7c 94 Gene3D G3DSA:3.40.1690.10 10 91 2.1E-26 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ABED_0093 86b696876555518e69670ba793ba3e38 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 318 8.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0093 86b696876555518e69670ba793ba3e38 461 SUPERFAMILY SSF55874 320 460 1.96E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0093 86b696876555518e69670ba793ba3e38 461 SUPERFAMILY SSF47384 242 320 1.26E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_0093 86b696876555518e69670ba793ba3e38 461 Pfam PF16736 Single Cache-like 34 142 3.4E-7 T 14-10-2018 IPR031967 PhoR, single Cache-like domain ABED_0093 86b696876555518e69670ba793ba3e38 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 459 1.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_0093 86b696876555518e69670ba793ba3e38 461 Gene3D G3DSA:3.30.565.10 325 461 2.8E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_0093 86b696876555518e69670ba793ba3e38 461 SMART SM00388 252 319 8.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABED_0093 86b696876555518e69670ba793ba3e38 461 Gene3D G3DSA:1.10.287.130 239 320 7.1E-15 T 14-10-2018 ABED_0093 86b696876555518e69670ba793ba3e38 461 SMART SM00387 361 451 5.9E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1502 5c6b1b85e58da8d0db232a8f5c8711c7 159 PIRSF PIRSF000709 1 90 1.7E-7 T 14-10-2018 ABED_1502 5c6b1b85e58da8d0db232a8f5c8711c7 159 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 79 2.8E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABED_1502 5c6b1b85e58da8d0db232a8f5c8711c7 159 SUPERFAMILY SSF53254 1 142 3.01E-24 T 14-10-2018 IPR029033 Histidine phosphatase superfamily ABED_1502 5c6b1b85e58da8d0db232a8f5c8711c7 159 SMART SM00855 3 116 6.7E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABED_1502 5c6b1b85e58da8d0db232a8f5c8711c7 159 Gene3D G3DSA:3.40.50.1240 1 158 1.2E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 474 38.235 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 Gene3D G3DSA:1.10.150.380 296 412 2.6E-31 T 14-10-2018 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 Pfam PF02934 GatB/GatE catalytic domain 4 288 1.1E-115 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 SMART SM00845 327 473 9.9E-71 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 Pfam PF02637 GatB domain 327 473 1.3E-47 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 474 1.4E-186 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 SUPERFAMILY SSF55931 3 292 2.88E-120 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 SUPERFAMILY SSF89095 296 399 2.62E-30 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ABED_0030 850c6f67bf5c13d58973ce336070c78c 474 Gene3D G3DSA:1.10.10.410 413 474 4.0E-25 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ABED_0051 14e8eb362f901a795c617af5485023ac 320 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 310 1.7E-115 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ABED_0051 14e8eb362f901a795c617af5485023ac 320 PIRSF PIRSF004692 1 320 9.3E-130 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ABED_0051 14e8eb362f901a795c617af5485023ac 320 Pfam PF01380 SIS domain 37 167 1.6E-28 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABED_0051 14e8eb362f901a795c617af5485023ac 320 SMART SM00116 270 319 23.0 T 14-10-2018 IPR000644 CBS domain ABED_0051 14e8eb362f901a795c617af5485023ac 320 SMART SM00116 205 253 0.0023 T 14-10-2018 IPR000644 CBS domain ABED_0051 14e8eb362f901a795c617af5485023ac 320 Gene3D G3DSA:3.10.580.10 192 317 5.8E-35 T 14-10-2018 ABED_0051 14e8eb362f901a795c617af5485023ac 320 SUPERFAMILY SSF53697 3 316 1.31E-62 T 14-10-2018 ABED_0051 14e8eb362f901a795c617af5485023ac 320 Pfam PF00571 CBS domain 264 317 1.2E-5 T 14-10-2018 IPR000644 CBS domain ABED_0051 14e8eb362f901a795c617af5485023ac 320 Pfam PF00571 CBS domain 204 253 3.8E-6 T 14-10-2018 IPR000644 CBS domain ABED_0051 14e8eb362f901a795c617af5485023ac 320 Gene3D G3DSA:3.40.50.10490 2 191 3.2E-65 T 14-10-2018 ABED_1728 1f0047bba1be65d2164431e166792f91 168 Gene3D G3DSA:2.40.100.10 18 168 1.0E-48 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily ABED_1728 1f0047bba1be65d2164431e166792f91 168 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 24 157 2.2E-39 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_1728 1f0047bba1be65d2164431e166792f91 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 37 52 8.3E-22 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_1728 1f0047bba1be65d2164431e166792f91 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 8.3E-22 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_1728 1f0047bba1be65d2164431e166792f91 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 63 75 8.3E-22 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_1728 1f0047bba1be65d2164431e166792f91 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 8.3E-22 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_1728 1f0047bba1be65d2164431e166792f91 168 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 58 75 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ABED_1728 1f0047bba1be65d2164431e166792f91 168 SUPERFAMILY SSF50891 21 157 4.82E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 SUPERFAMILY SSF53328 84 276 1.83E-56 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 Pfam PF00551 Formyl transferase 84 258 2.9E-45 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 42.581 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 SUPERFAMILY SSF55021 4 66 1.92E-6 T 14-10-2018 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 PIRSF PIRSF036480 1 277 3.4E-105 T 14-10-2018 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 Gene3D G3DSA:3.30.70.260 1 79 8.3E-12 T 14-10-2018 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 Gene3D G3DSA:3.40.50.170 81 277 2.6E-65 T 14-10-2018 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 2.9E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 2.9E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 2.9E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 2.9E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 2.9E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 2.9E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABED_1026 4131f80b29b22ee9c552da8d6f965ff5 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 6.6E-112 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABED_0820 838d1756e8730deed69ddd8679a2986b 442 SUPERFAMILY SSF58104 90 398 2.62E-52 T 14-10-2018 ABED_0820 838d1756e8730deed69ddd8679a2986b 442 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 221 373 3.0E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0820 838d1756e8730deed69ddd8679a2986b 442 Gene3D G3DSA:1.10.287.950 107 403 1.8E-56 T 14-10-2018 ABED_0820 838d1756e8730deed69ddd8679a2986b 442 SMART SM00283 160 399 5.2E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0820 838d1756e8730deed69ddd8679a2986b 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 258 285 1.7E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0820 838d1756e8730deed69ddd8679a2986b 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 335 364 1.7E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0820 838d1756e8730deed69ddd8679a2986b 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 181 210 1.7E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0820 838d1756e8730deed69ddd8679a2986b 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 1.7E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1233 8e87efb4e813f4aeb0b3fee7df5c170e 300 Gene3D G3DSA:3.40.50.150 5 296 2.5E-84 T 14-10-2018 ABED_1233 8e87efb4e813f4aeb0b3fee7df5c170e 300 PIRSF PIRSF004486 1 299 3.7E-96 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABED_1233 8e87efb4e813f4aeb0b3fee7df5c170e 300 SUPERFAMILY SSF81799 109 202 2.75E-25 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ABED_1233 8e87efb4e813f4aeb0b3fee7df5c170e 300 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 300 32.035 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABED_1233 8e87efb4e813f4aeb0b3fee7df5c170e 300 Pfam PF01795 MraW methylase family 3 298 7.0E-98 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABED_1233 8e87efb4e813f4aeb0b3fee7df5c170e 300 Gene3D G3DSA:1.10.150.170 108 205 2.5E-84 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ABED_1233 8e87efb4e813f4aeb0b3fee7df5c170e 300 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 299 4.1E-97 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABED_1233 8e87efb4e813f4aeb0b3fee7df5c170e 300 SUPERFAMILY SSF53335 4 297 9.45E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1607 7c43e22b133af439b5c35868138f07ea 149 Pfam PF01475 Ferric uptake regulator family 21 141 3.8E-41 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABED_1607 7c43e22b133af439b5c35868138f07ea 149 Gene3D G3DSA:3.30.1490.190 96 149 4.7E-25 T 14-10-2018 ABED_1607 7c43e22b133af439b5c35868138f07ea 149 Gene3D G3DSA:1.10.10.10 5 94 8.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1607 7c43e22b133af439b5c35868138f07ea 149 SUPERFAMILY SSF46785 13 146 4.23E-40 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 Pfam PF02780 Transketolase, C-terminal domain 476 595 6.0E-16 T 14-10-2018 IPR033248 Transketolase, C-terminal domain ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 Gene3D G3DSA:3.40.50.970 300 473 1.8E-59 T 14-10-2018 ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 SUPERFAMILY SSF52518 301 483 1.62E-46 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 601 38.963 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 ProSitePatterns PS00802 Transketolase signature 2. 408 424 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 266 4.6E-100 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 SUPERFAMILY SSF52518 3 364 4.52E-74 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 SMART SM00861 302 465 2.8E-56 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 ProSitePatterns PS00801 Transketolase signature 1. 19 38 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 SUPERFAMILY SSF52922 472 601 6.28E-18 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 Gene3D G3DSA:3.40.50.920 476 601 1.7E-20 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 Pfam PF02779 Transketolase, pyrimidine binding domain 305 463 1.8E-32 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABED_1934 85ad637e1852c364d08315ebbdc95b13 601 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 2 601 1.0E-243 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABED_0832 1e1488addbe4250ddfdd34d756a4630b 134 Gene3D G3DSA:3.30.1490.190 83 134 4.1E-11 T 14-10-2018 ABED_0832 1e1488addbe4250ddfdd34d756a4630b 134 SUPERFAMILY SSF46785 3 130 2.1E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0832 1e1488addbe4250ddfdd34d756a4630b 134 Pfam PF01475 Ferric uptake regulator family 12 124 1.5E-25 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABED_0832 1e1488addbe4250ddfdd34d756a4630b 134 Gene3D G3DSA:1.10.10.10 1 81 4.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 SUPERFAMILY SSF55174 5 106 4.19E-14 T 14-10-2018 ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 Gene3D G3DSA:3.10.290.10 11 63 1.9E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 SUPERFAMILY SSF55120 80 304 1.76E-63 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 SMART SM00363 11 70 2.9E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 Pfam PF01479 S4 domain 12 55 4.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 9 303 3.7E-74 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 Pfam PF00849 RNA pseudouridylate synthase 93 246 1.2E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 Gene3D G3DSA:3.30.2350.10 84 308 3.8E-63 T 14-10-2018 ABED_0949 a3d72b823eca799038a06b05ede9e0ef 328 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1357 6439b910822a798c05735bab0f8b461f 279 Pfam PF16344 Domain of unknown function (DUF4974) 179 276 5.0E-17 T 14-10-2018 IPR032508 Protein FecR, C-terminal ABED_1357 6439b910822a798c05735bab0f8b461f 279 Gene3D G3DSA:2.60.120.1440 68 205 4.0E-28 T 14-10-2018 ABED_1357 6439b910822a798c05735bab0f8b461f 279 Gene3D G3DSA:3.55.50.30 206 279 6.6E-10 T 14-10-2018 ABED_1357 6439b910822a798c05735bab0f8b461f 279 Pfam PF04773 FecR protein 81 165 3.6E-20 T 14-10-2018 IPR006860 FecR protein ABED_1357 6439b910822a798c05735bab0f8b461f 279 PIRSF PIRSF018266 1 279 4.0E-59 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ABED_0224 a06ca7d04bde8dc2b8ae948ad5f7baf0 170 PIRSF PIRSF002070 1 156 3.6E-29 T 14-10-2018 ABED_0224 a06ca7d04bde8dc2b8ae948ad5f7baf0 170 SUPERFAMILY SSF50249 1 170 6.51E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0224 a06ca7d04bde8dc2b8ae948ad5f7baf0 170 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 30.214 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABED_0224 a06ca7d04bde8dc2b8ae948ad5f7baf0 170 Gene3D G3DSA:2.40.50.140 1 121 6.6E-35 T 14-10-2018 ABED_0224 a06ca7d04bde8dc2b8ae948ad5f7baf0 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 170 3.7E-47 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABED_0224 a06ca7d04bde8dc2b8ae948ad5f7baf0 170 Pfam PF00436 Single-strand binding protein family 3 105 2.5E-29 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ABED_0403 07e3cdd61343f0b1991d73dc0d574d46 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 116 1.8E-52 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABED_0403 07e3cdd61343f0b1991d73dc0d574d46 127 Gene3D G3DSA:2.40.40.20 1 122 3.0E-51 T 14-10-2018 ABED_0403 07e3cdd61343f0b1991d73dc0d574d46 127 SUPERFAMILY SSF50692 1 118 3.89E-48 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABED_0403 07e3cdd61343f0b1991d73dc0d574d46 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 92 3.0E-35 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABED_0403 07e3cdd61343f0b1991d73dc0d574d46 127 PIRSF PIRSF006246 1 125 2.9E-51 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABED_0403 07e3cdd61343f0b1991d73dc0d574d46 127 Pfam PF02261 Aspartate decarboxylase 1 114 2.5E-51 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABED_0403 07e3cdd61343f0b1991d73dc0d574d46 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 65.862 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABED_0785 208b158cba76c196e2b2e7a1f19dbf18 140 Gene3D G3DSA:1.10.760.10 1 140 1.3E-7 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0785 208b158cba76c196e2b2e7a1f19dbf18 140 SUPERFAMILY SSF46626 33 140 7.2E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0307 2f853d0c74f4cb7b56253670434d98b5 623 Gene3D G3DSA:1.10.287.950 322 617 1.7E-57 T 14-10-2018 ABED_0307 2f853d0c74f4cb7b56253670434d98b5 623 SMART SM01049 26 122 7.5E-13 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_0307 2f853d0c74f4cb7b56253670434d98b5 623 SMART SM00283 372 621 7.1E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0307 2f853d0c74f4cb7b56253670434d98b5 623 Pfam PF17200 Single Cache domain 2 35 178 2.2E-21 T 14-10-2018 IPR033480 Single Cache domain 2 ABED_0307 2f853d0c74f4cb7b56253670434d98b5 623 SUPERFAMILY SSF58104 292 616 2.62E-51 T 14-10-2018 ABED_0307 2f853d0c74f4cb7b56253670434d98b5 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 432 585 1.3E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0307 2f853d0c74f4cb7b56253670434d98b5 623 Gene3D G3DSA:3.30.450.20 25 180 1.0E-24 T 14-10-2018 ABED_0963 88ff69fae2f0729c3504f1e917ef861e 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.561 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0963 88ff69fae2f0729c3504f1e917ef861e 122 Gene3D G3DSA:4.10.910.10 73 118 1.3E-24 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0963 88ff69fae2f0729c3504f1e917ef861e 122 Gene3D G3DSA:1.10.8.50 1 72 1.1E-28 T 14-10-2018 ABED_0963 88ff69fae2f0729c3504f1e917ef861e 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.0E-51 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0963 88ff69fae2f0729c3504f1e917ef861e 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0963 88ff69fae2f0729c3504f1e917ef861e 122 SUPERFAMILY SSF46946 2 117 1.29E-43 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ABED_0963 88ff69fae2f0729c3504f1e917ef861e 122 PIRSF PIRSF002134 1 122 6.2E-43 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0963 88ff69fae2f0729c3504f1e917ef861e 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 7.9E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 Pfam PF02355 Protein export membrane protein 336 501 1.6E-20 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 Gene3D G3DSA:3.30.70.3400 133 338 2.3E-58 T 14-10-2018 ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 SUPERFAMILY SSF82866 311 507 3.92E-42 T 14-10-2018 ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 515 39.704 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 264 494 6.1E-81 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 3.7E-9 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 PRINTS PR00702 Acriflavin resistance protein family signature 350 373 3.7E-9 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 3.7E-9 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 Gene3D G3DSA:3.30.1360.200 192 332 2.3E-58 T 14-10-2018 ABED_0370 b9d5c1a636ed366b66198301c39cf863 521 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 37 500 2.5E-141 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ABED_2152 89d44db52d4129b954264803cb01f61a 283 Pfam PF12833 Helix-turn-helix domain 207 280 1.4E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_2152 89d44db52d4129b954264803cb01f61a 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABED_2152 89d44db52d4129b954264803cb01f61a 283 SUPERFAMILY SSF46689 234 281 3.0E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_2152 89d44db52d4129b954264803cb01f61a 283 SMART SM00342 197 280 4.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_2152 89d44db52d4129b954264803cb01f61a 283 Gene3D G3DSA:1.10.10.60 175 283 1.1E-22 T 14-10-2018 ABED_2152 89d44db52d4129b954264803cb01f61a 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABED_2152 89d44db52d4129b954264803cb01f61a 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABED_1887 7a363a9bf8ca1fc2801475d6d45e305c 488 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 454 2.5E-109 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1887 7a363a9bf8ca1fc2801475d6d45e305c 488 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 484 5.0E-209 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ABED_1887 7a363a9bf8ca1fc2801475d6d45e305c 488 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1887 7a363a9bf8ca1fc2801475d6d45e305c 488 SUPERFAMILY SSF81442 9 485 3.66E-113 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1887 7a363a9bf8ca1fc2801475d6d45e305c 488 Gene3D G3DSA:1.20.210.10 1 483 1.3E-183 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1389 d1922adc7f5113d48b5040c8fa4ab36b 421 Pfam PF00817 impB/mucB/samB family 5 194 1.8E-47 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABED_1389 d1922adc7f5113d48b5040c8fa4ab36b 421 SUPERFAMILY SSF56672 2 270 2.45E-59 T 14-10-2018 ABED_1911 604e063b923d0a6ffc4def97bba68624 123 SUPERFAMILY SSF109635 3 81 8.24E-11 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily ABED_1911 604e063b923d0a6ffc4def97bba68624 123 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 85 109 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site ABED_1911 604e063b923d0a6ffc4def97bba68624 123 Gene3D G3DSA:1.20.120.910 1 121 1.7E-27 T 14-10-2018 ABED_1911 604e063b923d0a6ffc4def97bba68624 123 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 80 115 3.7E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ABED_1911 604e063b923d0a6ffc4def97bba68624 123 SUPERFAMILY SSF57716 82 117 3.71E-8 T 14-10-2018 ABED_0164 221577efe7d215cfe80a17bd24726528 925 SUPERFAMILY SSF52540 233 534 5.83E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0164 221577efe7d215cfe80a17bd24726528 925 Gene3D G3DSA:3.30.870.10 4 170 1.5E-31 T 14-10-2018 ABED_0164 221577efe7d215cfe80a17bd24726528 925 Pfam PF04851 Type III restriction enzyme, res subunit 186 332 9.7E-33 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABED_0164 221577efe7d215cfe80a17bd24726528 925 Pfam PF00271 Helicase conserved C-terminal domain 410 511 1.7E-12 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0164 221577efe7d215cfe80a17bd24726528 925 SMART SM00490 429 512 1.1E-9 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_0164 221577efe7d215cfe80a17bd24726528 925 Gene3D G3DSA:3.40.50.300 171 348 2.3E-45 T 14-10-2018 ABED_0164 221577efe7d215cfe80a17bd24726528 925 Pfam PF11907 Domain of unknown function (DUF3427) 659 921 1.7E-57 T 14-10-2018 IPR021835 Protein of unknown function DUF3427 ABED_0164 221577efe7d215cfe80a17bd24726528 925 SMART SM00487 183 360 3.9E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABED_0164 221577efe7d215cfe80a17bd24726528 925 Gene3D G3DSA:3.40.50.300 352 535 1.7E-37 T 14-10-2018 ABED_0164 221577efe7d215cfe80a17bd24726528 925 Pfam PF13091 PLD-like domain 40 152 6.5E-10 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABED_0164 221577efe7d215cfe80a17bd24726528 925 SUPERFAMILY SSF56024 12 158 1.14E-8 T 14-10-2018 ABED_0970 df0b210f0d4ce713cfd93b15f72bdacc 150 Pfam PF07883 Cupin domain 60 126 9.2E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel ABED_0970 df0b210f0d4ce713cfd93b15f72bdacc 150 SUPERFAMILY SSF51182 34 140 1.54E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_0970 df0b210f0d4ce713cfd93b15f72bdacc 150 Gene3D G3DSA:2.60.120.10 32 140 7.2E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 SUPERFAMILY SSF82714 182 272 1.09E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 SUPERFAMILY SSF82693 39 131 2.01E-24 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Pfam PF00873 AcrB/AcrD/AcrF family 2 1031 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.0E-99 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 SUPERFAMILY SSF82693 564 676 8.37E-23 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Gene3D G3DSA:3.30.70.1430 566 673 0.0 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Gene3D G3DSA:1.20.1640.10 512 1027 0.0 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 SUPERFAMILY SSF82866 296 497 1.15E-47 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Gene3D G3DSA:3.30.70.1440 674 870 0.0 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Gene3D G3DSA:1.20.1640.10 9 511 0.0 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 SUPERFAMILY SSF82693 136 330 3.49E-22 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 SUPERFAMILY SSF82714 727 812 3.4E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1050 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 SUPERFAMILY SSF82866 838 1031 6.15E-40 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Gene3D G3DSA:3.30.70.1430 39 822 0.0 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Gene3D G3DSA:3.30.2090.10 726 814 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 SUPERFAMILY SSF82693 677 861 1.88E-14 T 14-10-2018 ABED_2033 74a78ad8d03164d8daa4a879460b7ec9 1055 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 14-10-2018 ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 Pfam PF00005 ABC transporter 21 160 1.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 Gene3D G3DSA:3.40.50.300 311 556 4.6E-62 T 14-10-2018 ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 Gene3D G3DSA:3.40.50.300 1 231 1.7E-59 T 14-10-2018 ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 SMART SM00382 348 538 9.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 SMART SM00382 29 208 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 Pfam PF00005 ABC transporter 340 483 8.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 SUPERFAMILY SSF52540 323 542 4.76E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1273 ba7b7ab2437a21b7446c90d4c637b7de 566 SUPERFAMILY SSF52540 3 224 5.43E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1737 ac7da029110f1e83833e6928763fecd1 497 Gene3D G3DSA:3.20.130.10 311 488 7.5E-57 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ABED_1737 ac7da029110f1e83833e6928763fecd1 497 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 4.2E-47 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ABED_1737 ac7da029110f1e83833e6928763fecd1 497 PIRSF PIRSF001394 1 497 3.4E-190 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 ABED_1737 ac7da029110f1e83833e6928763fecd1 497 SUPERFAMILY SSF117457 314 487 6.93E-58 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ABED_1737 ac7da029110f1e83833e6928763fecd1 497 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 283 2.3E-62 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ABED_1737 ac7da029110f1e83833e6928763fecd1 497 Pfam PF05681 Fumarate hydratase (Fumerase) 12 285 4.2E-97 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ABED_1737 ac7da029110f1e83833e6928763fecd1 497 Pfam PF05683 Fumarase C-terminus 289 489 9.5E-74 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ABED_1757 223619af0f22591c52e796d014afecbf 274 SUPERFAMILY SSF52540 29 270 9.81E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1757 223619af0f22591c52e796d014afecbf 274 Gene3D G3DSA:3.40.50.300 28 272 2.2E-41 T 14-10-2018 ABED_1757 223619af0f22591c52e796d014afecbf 274 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 29 269 3.0E-19 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ABED_1757 223619af0f22591c52e796d014afecbf 274 PIRSF PIRSF003092 6 273 5.9E-52 T 14-10-2018 IPR025501 ATP binding protein MinD ABED_0721 1a53c32d8f34d2eb18f75c9e45b4c928 222 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 53 218 1.5E-39 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 ABED_0721 1a53c32d8f34d2eb18f75c9e45b4c928 222 SUPERFAMILY SSF52141 42 220 1.14E-39 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_0721 1a53c32d8f34d2eb18f75c9e45b4c928 222 SMART SM00987 67 212 1.6E-16 T 14-10-2018 ABED_0721 1a53c32d8f34d2eb18f75c9e45b4c928 222 SMART SM00986 67 212 1.6E-16 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_0721 1a53c32d8f34d2eb18f75c9e45b4c928 222 Gene3D G3DSA:3.40.470.10 42 222 2.9E-44 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_0721 1a53c32d8f34d2eb18f75c9e45b4c928 222 Pfam PF03167 Uracil DNA glycosylase superfamily 67 210 1.2E-31 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 Pfam PF00027 Cyclic nucleotide-binding domain 34 113 1.2E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 Pfam PF03445 Putative nucleotidyltransferase DUF294 297 425 9.7E-38 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 Gene3D G3DSA:3.10.580.10 147 273 5.2E-16 T 14-10-2018 ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 Pfam PF00571 CBS domain 217 261 0.006 T 14-10-2018 IPR000644 CBS domain ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 SMART SM00100 15 130 2.2E-6 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 SUPERFAMILY SSF54631 149 268 1.89E-17 T 14-10-2018 ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 464 608 2.6E-43 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 Gene3D G3DSA:2.60.120.10 7 143 3.7E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 SMART SM00116 221 269 1.8 T 14-10-2018 IPR000644 CBS domain ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 SMART SM00116 157 204 9.0 T 14-10-2018 IPR000644 CBS domain ABED_0473 7ec0c27d22fbcc47e0c18b56ce6583fa 613 SUPERFAMILY SSF51206 9 131 1.83E-19 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like ABED_0937 e5df13fed945cd35b101144814931fb2 519 SUPERFAMILY SSF82866 322 512 6.93E-32 T 14-10-2018 ABED_0937 e5df13fed945cd35b101144814931fb2 519 Gene3D G3DSA:3.30.70.1430 47 140 1.4E-110 T 14-10-2018 ABED_0937 e5df13fed945cd35b101144814931fb2 519 SUPERFAMILY SSF82693 53 141 1.05E-14 T 14-10-2018 ABED_0937 e5df13fed945cd35b101144814931fb2 519 SUPERFAMILY SSF82714 196 279 1.23E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0937 e5df13fed945cd35b101144814931fb2 519 Pfam PF00873 AcrB/AcrD/AcrF family 12 517 4.5E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0937 e5df13fed945cd35b101144814931fb2 519 Gene3D G3DSA:3.30.70.1320 141 348 1.4E-110 T 14-10-2018 ABED_0937 e5df13fed945cd35b101144814931fb2 519 Gene3D G3DSA:1.20.1640.10 20 517 1.4E-110 T 14-10-2018 ABED_0937 e5df13fed945cd35b101144814931fb2 519 PRINTS PR00702 Acriflavin resistance protein family signature 488 511 3.4E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0937 e5df13fed945cd35b101144814931fb2 519 PRINTS PR00702 Acriflavin resistance protein family signature 408 432 3.4E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0937 e5df13fed945cd35b101144814931fb2 519 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 3.4E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0937 e5df13fed945cd35b101144814931fb2 519 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 3.4E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0937 e5df13fed945cd35b101144814931fb2 519 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.4E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0937 e5df13fed945cd35b101144814931fb2 519 PRINTS PR00702 Acriflavin resistance protein family signature 354 377 3.4E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0937 e5df13fed945cd35b101144814931fb2 519 Gene3D G3DSA:3.30.2090.10 192 287 1.4E-110 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0350 14b3922740d791d7a214e4940d636a73 226 Pfam PF00072 Response regulator receiver domain 3 112 9.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0350 14b3922740d791d7a214e4940d636a73 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 217 5.2E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0350 14b3922740d791d7a214e4940d636a73 226 Gene3D G3DSA:1.10.10.10 122 225 1.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0350 14b3922740d791d7a214e4940d636a73 226 SMART SM00862 142 217 1.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0350 14b3922740d791d7a214e4940d636a73 226 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-37 T 14-10-2018 ABED_0350 14b3922740d791d7a214e4940d636a73 226 SMART SM00448 1 112 1.2E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0350 14b3922740d791d7a214e4940d636a73 226 SUPERFAMILY SSF52172 1 172 6.83E-36 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1875 fa9a3625dfba1535f1c7269157581695 301 Hamap MF_00082 Acetylglutamate kinase [argB]. 23 276 45.655 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABED_1875 fa9a3625dfba1535f1c7269157581695 301 PIRSF PIRSF000728 9 283 1.3E-101 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABED_1875 fa9a3625dfba1535f1c7269157581695 301 SUPERFAMILY SSF53633 3 282 3.93E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABED_1875 fa9a3625dfba1535f1c7269157581695 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 25 258 4.1E-75 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABED_1875 fa9a3625dfba1535f1c7269157581695 301 Gene3D G3DSA:3.40.1160.10 2 288 1.7E-92 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABED_1875 fa9a3625dfba1535f1c7269157581695 301 Pfam PF00696 Amino acid kinase family 24 260 3.9E-45 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABED_1852 c8539fd74d0f1889eb0ad84248a2e245 142 Gene3D G3DSA:3.30.300.70 1 75 2.1E-18 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily ABED_1852 c8539fd74d0f1889eb0ad84248a2e245 142 SUPERFAMILY SSF75420 4 78 2.88E-19 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily ABED_1852 c8539fd74d0f1889eb0ad84248a2e245 142 Pfam PF02576 RimP N-terminal domain 7 78 4.8E-23 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal ABED_1852 c8539fd74d0f1889eb0ad84248a2e245 142 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 142 19.655 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 ABED_1852 c8539fd74d0f1889eb0ad84248a2e245 142 Pfam PF17384 RimP C-terminal SH3 domain 81 142 2.5E-5 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal ABED_1852 c8539fd74d0f1889eb0ad84248a2e245 142 SUPERFAMILY SSF74942 79 142 1.44E-7 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 Gene3D G3DSA:3.40.50.1220 187 363 4.7E-57 T 14-10-2018 ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 SUPERFAMILY SSF52518 361 561 2.14E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 167 7.6E-58 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 SUPERFAMILY SSF52518 1 183 9.43E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 537 3.8E-51 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 SUPERFAMILY SSF52467 186 355 2.5E-58 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 Gene3D G3DSA:3.40.50.970 364 565 6.1E-68 T 14-10-2018 ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 560 2.2E-240 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 Gene3D G3DSA:3.40.50.970 1 178 5.9E-71 T 14-10-2018 ABED_1097 ba517f3364dda6a9c0f3e6dc4e50b40f 565 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 327 4.9E-45 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 SUPERFAMILY SSF47384 346 420 1.08E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 Pfam PF07695 7TM diverse intracellular signalling 136 327 1.3E-21 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 SUPERFAMILY SSF55874 418 566 7.99E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 530 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 549 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 516 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 561 8.0E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 Gene3D G3DSA:3.30.565.10 421 567 5.3E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 Gene3D G3DSA:1.10.287.130 337 418 1.8E-12 T 14-10-2018 ABED_1700 15306f1adc80bf9597cab52bd5f0f2f5 567 SMART SM00387 461 567 6.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABED_1917 43afa7cc24078cdf2ac944132b5a7be3 81 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 79 20.38 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1917 43afa7cc24078cdf2ac944132b5a7be3 81 SUPERFAMILY SSF82697 1 79 6.1E-25 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1917 43afa7cc24078cdf2ac944132b5a7be3 81 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 79 2.0E-17 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1917 43afa7cc24078cdf2ac944132b5a7be3 81 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 79 8.0E-29 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1917 43afa7cc24078cdf2ac944132b5a7be3 81 Gene3D G3DSA:3.30.1280.10 1 81 2.1E-28 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABED_1917 43afa7cc24078cdf2ac944132b5a7be3 81 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 79 1.3E-27 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_2136 f0d3e50992618d6184bc22df5722e693 528 Pfam PF03929 PepSY-associated TM region 20 377 1.9E-27 T 14-10-2018 IPR005625 PepSY-associated TM protein ABED_1976 d25c42066dee0393cc3d31a487251567 248 Pfam PF02654 Cobalamin-5-phosphate synthase 11 240 3.4E-33 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 ABED_1976 d25c42066dee0393cc3d31a487251567 248 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 248 22.324 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 ABED_1189 b81f40528f585fcc1781740217aa99df 240 Pfam PF00005 ABC transporter 19 165 7.0E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1189 b81f40528f585fcc1781740217aa99df 240 Gene3D G3DSA:3.40.50.300 2 240 8.6E-73 T 14-10-2018 ABED_1189 b81f40528f585fcc1781740217aa99df 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 235 1.2E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ABED_1189 b81f40528f585fcc1781740217aa99df 240 SUPERFAMILY SSF52540 4 236 3.75E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1189 b81f40528f585fcc1781740217aa99df 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 239 1.3E-106 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 ABED_1189 b81f40528f585fcc1781740217aa99df 240 SMART SM00382 28 213 5.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0694 878b77312d1cc3cced869da0a0554b39 239 Gene3D G3DSA:3.40.50.1820 13 236 4.6E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_0694 878b77312d1cc3cced869da0a0554b39 239 SUPERFAMILY SSF53474 13 235 2.99E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_0694 878b77312d1cc3cced869da0a0554b39 239 Pfam PF12697 Alpha/beta hydrolase family 28 117 5.0E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABED_1935 23c4cdfb1c0c18fac40828b6138aa153 339 Gene3D G3DSA:1.10.760.10 50 190 1.3E-95 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1935 23c4cdfb1c0c18fac40828b6138aa153 339 PIRSF PIRSF000294 3 338 4.0E-129 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 ABED_1935 23c4cdfb1c0c18fac40828b6138aa153 339 Pfam PF00034 Cytochrome c 212 315 4.9E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1935 23c4cdfb1c0c18fac40828b6138aa153 339 Gene3D G3DSA:1.10.760.10 191 317 1.3E-95 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1935 23c4cdfb1c0c18fac40828b6138aa153 339 SUPERFAMILY SSF46626 42 192 5.01E-45 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1935 23c4cdfb1c0c18fac40828b6138aa153 339 Pfam PF03150 Di-haem cytochrome c peroxidase 54 203 7.1E-43 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 ABED_1935 23c4cdfb1c0c18fac40828b6138aa153 339 SUPERFAMILY SSF46626 191 333 1.88E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1421 d8e5687ad1bc5411d35c31863e6d80be 451 Gene3D G3DSA:3.40.640.10 86 348 1.7E-161 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1421 d8e5687ad1bc5411d35c31863e6d80be 451 Pfam PF03841 L-seryl-tRNA selenium transferase 74 431 3.7E-140 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 ABED_1421 d8e5687ad1bc5411d35c31863e6d80be 451 SUPERFAMILY SSF53383 65 448 1.06E-43 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1421 d8e5687ad1bc5411d35c31863e6d80be 451 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 4 444 5.9E-172 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 ABED_1421 d8e5687ad1bc5411d35c31863e6d80be 451 Gene3D G3DSA:3.90.1150.110 7 436 1.7E-161 T 14-10-2018 ABED_1421 d8e5687ad1bc5411d35c31863e6d80be 451 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 449 183.523 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 ABED_1998 3b494cf061bae6a32a60af29b7f11577 407 SUPERFAMILY SSF52507 3 180 7.72E-52 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABED_1998 3b494cf061bae6a32a60af29b7f11577 407 Gene3D G3DSA:3.40.50.10300 187 407 1.4E-57 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABED_1998 3b494cf061bae6a32a60af29b7f11577 407 Pfam PF02441 Flavoprotein 6 179 2.7E-41 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ABED_1998 3b494cf061bae6a32a60af29b7f11577 407 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 402 7.7E-110 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 ABED_1998 3b494cf061bae6a32a60af29b7f11577 407 Gene3D G3DSA:3.40.50.1950 1 186 4.4E-58 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABED_1998 3b494cf061bae6a32a60af29b7f11577 407 SUPERFAMILY SSF102645 173 404 1.11E-51 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABED_1998 3b494cf061bae6a32a60af29b7f11577 407 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 376 1.4E-45 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABED_0902 ebfdecf5fe0ca1eb5a31db66cce46351 134 Pfam PF12870 Domain of unknown function (DUF4878) 19 125 4.7E-32 T 14-10-2018 IPR024267 Domain of unknown function (DUF4878) ABED_1309 a3ae435a992fc46a91ecb1f5f7a3b49f 282 Gene3D G3DSA:1.10.1040.10 163 282 2.6E-30 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABED_1309 a3ae435a992fc46a91ecb1f5f7a3b49f 282 PIRSF PIRSF000103 1 282 1.1E-66 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABED_1309 a3ae435a992fc46a91ecb1f5f7a3b49f 282 SUPERFAMILY SSF48179 164 282 9.75E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABED_1309 a3ae435a992fc46a91ecb1f5f7a3b49f 282 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 6.4E-50 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ABED_1309 a3ae435a992fc46a91ecb1f5f7a3b49f 282 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 281 7.3E-28 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ABED_1309 a3ae435a992fc46a91ecb1f5f7a3b49f 282 SUPERFAMILY SSF51735 2 163 1.02E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1309 a3ae435a992fc46a91ecb1f5f7a3b49f 282 Gene3D G3DSA:3.40.50.720 1 162 1.4E-50 T 14-10-2018 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 Pfam PF00871 Acetokinase family 3 388 4.8E-153 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 Hamap MF_00020 Acetate kinase [ackA]. 1 396 180.066 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 1.5E-159 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 Gene3D G3DSA:3.30.420.40 1 195 6.4E-70 T 14-10-2018 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 SUPERFAMILY SSF53067 1 196 2.33E-67 T 14-10-2018 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 Gene3D G3DSA:3.30.420.40 196 396 5.3E-82 T 14-10-2018 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 PRINTS PR00471 Acetate kinase family signature 298 311 2.8E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 PRINTS PR00471 Acetate kinase family signature 173 186 2.8E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 PRINTS PR00471 Acetate kinase family signature 3 14 2.8E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 PRINTS PR00471 Acetate kinase family signature 375 387 2.8E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 PRINTS PR00471 Acetate kinase family signature 201 222 2.8E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 PRINTS PR00471 Acetate kinase family signature 320 336 2.8E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 SUPERFAMILY SSF53067 158 394 1.18E-85 T 14-10-2018 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 201 218 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0469 194c36689a294d494475afc6a3c2bf8c 396 PIRSF PIRSF000722 1 396 4.6E-153 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0357 9dc8b103cd0f2a33db0f3f619d5ddcf4 286 Gene3D G3DSA:3.40.50.1100 33 117 2.2E-5 T 14-10-2018 ABED_0357 9dc8b103cd0f2a33db0f3f619d5ddcf4 286 SUPERFAMILY SSF53686 5 280 1.8E-40 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABED_0357 9dc8b103cd0f2a33db0f3f619d5ddcf4 286 PIRSF PIRSF006278 95 167 0.053 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase ABED_0357 9dc8b103cd0f2a33db0f3f619d5ddcf4 286 PIRSF PIRSF006278 5 82 1.8E-10 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase ABED_0357 9dc8b103cd0f2a33db0f3f619d5ddcf4 286 PIRSF PIRSF006278 204 285 9.9 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase ABED_0357 9dc8b103cd0f2a33db0f3f619d5ddcf4 286 Gene3D G3DSA:3.40.50.1100 118 279 1.4E-10 T 14-10-2018 ABED_0563 023068f1f9dc6943f184aa0de55f016b 136 Gene3D G3DSA:3.90.1010.10 2 136 3.4E-44 T 14-10-2018 ABED_0563 023068f1f9dc6943f184aa0de55f016b 136 Pfam PF02657 Fe-S metabolism associated domain 13 131 6.2E-40 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like ABED_0563 023068f1f9dc6943f184aa0de55f016b 136 SUPERFAMILY SSF82649 6 134 5.75E-39 T 14-10-2018 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 Gene3D G3DSA:3.40.50.1260 8 394 2.2E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 SUPERFAMILY SSF53748 2 394 9.66E-144 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 171 193 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 372 389 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 349 360 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PRINTS PR00477 Phosphoglycerate kinase family signature 194 213 5.9E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 Gene3D G3DSA:3.40.50.1260 173 386 2.2E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 Pfam PF00162 Phosphoglycerate kinase 6 386 1.9E-150 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 PIRSF PIRSF000724 1 400 1.1E-143 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1928 ca6c020a7fe0869e561f07d441215ce3 400 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 396 38.553 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0396 7644d68da99c20b037a4c0feb8202a0f 270 PIRSF PIRSF004789 1 263 9.7E-89 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like ABED_0396 7644d68da99c20b037a4c0feb8202a0f 270 SUPERFAMILY SSF56300 1 246 1.33E-65 T 14-10-2018 ABED_0396 7644d68da99c20b037a4c0feb8202a0f 270 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 254 1.1E-77 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like ABED_0396 7644d68da99c20b037a4c0feb8202a0f 270 Gene3D G3DSA:3.60.21.10 1 269 6.4E-88 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like ABED_0396 7644d68da99c20b037a4c0feb8202a0f 270 Pfam PF13277 YmdB-like protein 5 245 1.8E-87 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 TIGRFAM TIGR00492 alr: alanine racemase 4 339 2.1E-53 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 PRINTS PR00992 Alanine racemase signature 142 153 4.9E-28 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 PRINTS PR00992 Alanine racemase signature 25 41 4.9E-28 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 PRINTS PR00992 Alanine racemase signature 244 259 4.9E-28 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 PRINTS PR00992 Alanine racemase signature 261 276 4.9E-28 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 PRINTS PR00992 Alanine racemase signature 109 121 4.9E-28 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 PRINTS PR00992 Alanine racemase signature 188 215 4.9E-28 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 SMART SM01005 228 340 4.7E-31 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 Pfam PF00842 Alanine racemase, C-terminal domain 228 337 3.9E-20 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 Gene3D G3DSA:2.40.37.10 220 337 4.5E-64 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 SUPERFAMILY SSF51419 8 229 3.92E-39 T 14-10-2018 IPR029066 PLP-binding barrel ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 Hamap MF_01201 Alanine racemase. 6 340 20.991 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 SUPERFAMILY SSF50621 224 338 5.58E-29 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 Pfam PF01168 Alanine racemase, N-terminal domain 7 214 7.6E-39 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABED_0734 315dcc9b9ff7d82a88aeffc0cd427f0e 340 Gene3D G3DSA:3.20.20.10 9 219 4.5E-64 T 14-10-2018 IPR029066 PLP-binding barrel ABED_0444 448472015c747e07c5c342ee186e00cb 545 Pfam PF00664 ABC transporter transmembrane region 18 288 2.6E-37 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABED_0444 448472015c747e07c5c342ee186e00cb 545 SUPERFAMILY SSF90123 6 315 6.28E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABED_0444 448472015c747e07c5c342ee186e00cb 545 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0444 448472015c747e07c5c342ee186e00cb 545 Gene3D G3DSA:1.20.1560.10 3 315 1.0E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABED_0444 448472015c747e07c5c342ee186e00cb 545 SUPERFAMILY SSF52540 317 541 2.52E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0444 448472015c747e07c5c342ee186e00cb 545 Pfam PF00005 ABC transporter 344 491 1.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0444 448472015c747e07c5c342ee186e00cb 545 Gene3D G3DSA:3.40.50.300 316 545 3.7E-59 T 14-10-2018 ABED_0444 448472015c747e07c5c342ee186e00cb 545 SMART SM00382 352 538 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1159 aabf535eee865c3d39cfa0babd7718e6 225 Gene3D G3DSA:3.20.20.70 4 212 1.1E-26 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1159 aabf535eee865c3d39cfa0babd7718e6 225 Pfam PF04055 Radical SAM superfamily 30 155 2.0E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_1159 aabf535eee865c3d39cfa0babd7718e6 225 Pfam PF13353 4Fe-4S single cluster domain 21 117 2.3E-9 T 14-10-2018 ABED_1159 aabf535eee865c3d39cfa0babd7718e6 225 SUPERFAMILY SSF102114 23 190 3.27E-25 T 14-10-2018 ABED_1159 aabf535eee865c3d39cfa0babd7718e6 225 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 6 193 1.3E-52 T 14-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein ABED_0126 7d6bcba260f103d1f095d567fdb74e49 209 Gene3D G3DSA:2.40.128.110 21 181 8.4E-39 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0126 7d6bcba260f103d1f095d567fdb74e49 209 SUPERFAMILY SSF101874 20 178 1.7E-38 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0126 7d6bcba260f103d1f095d567fdb74e49 209 Pfam PF04264 YceI-like domain 22 177 1.3E-34 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_0126 7d6bcba260f103d1f095d567fdb74e49 209 SMART SM00867 21 180 1.3E-46 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_2114 7db92b08dbd1edd69214b30c5a427589 359 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 35 356 7.7E-138 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ABED_2114 7db92b08dbd1edd69214b30c5a427589 359 Pfam PF13531 Bacterial extracellular solute-binding protein 47 310 3.3E-37 T 14-10-2018 ABED_2114 7db92b08dbd1edd69214b30c5a427589 359 Gene3D G3DSA:3.40.190.10 42 326 3.6E-125 T 14-10-2018 ABED_2114 7db92b08dbd1edd69214b30c5a427589 359 Gene3D G3DSA:3.40.190.10 130 355 3.6E-125 T 14-10-2018 ABED_2114 7db92b08dbd1edd69214b30c5a427589 359 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 63 75 - T 14-10-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site ABED_2114 7db92b08dbd1edd69214b30c5a427589 359 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 161 169 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 ABED_2114 7db92b08dbd1edd69214b30c5a427589 359 SUPERFAMILY SSF53850 37 358 1.09E-81 T 14-10-2018 ABED_0712 ec745c9b71ee7ad76f97f65ccc83ed50 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.768 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z ABED_0712 ec745c9b71ee7ad76f97f65ccc83ed50 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 2.9E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0712 ec745c9b71ee7ad76f97f65ccc83ed50 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0712 ec745c9b71ee7ad76f97f65ccc83ed50 61 SUPERFAMILY SSF57716 3 61 1.57E-21 T 14-10-2018 ABED_0712 ec745c9b71ee7ad76f97f65ccc83ed50 61 Gene3D G3DSA:4.10.830.10 1 61 5.7E-31 T 14-10-2018 ABED_1172 0423cbf251c058a1cad6d047e5758ec3 247 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 217 5.4E-70 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABED_1172 0423cbf251c058a1cad6d047e5758ec3 247 ProSitePatterns PS01218 TatC family signature. 150 169 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site ABED_1172 0423cbf251c058a1cad6d047e5758ec3 247 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 5 222 7.3E-70 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABED_1172 0423cbf251c058a1cad6d047e5758ec3 247 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 1 237 17.284 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABED_1172 0423cbf251c058a1cad6d047e5758ec3 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 150 178 8.7E-42 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABED_1172 0423cbf251c058a1cad6d047e5758ec3 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 4 31 8.7E-42 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABED_1172 0423cbf251c058a1cad6d047e5758ec3 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 8.7E-42 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABED_1172 0423cbf251c058a1cad6d047e5758ec3 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 8.7E-42 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABED_0829 4a416fffa238d204dd7e8835fb70a793 569 SMART SM00382 358 558 8.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0829 4a416fffa238d204dd7e8835fb70a793 569 Pfam PF00664 ABC transporter transmembrane region 20 285 7.8E-51 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABED_0829 4a416fffa238d204dd7e8835fb70a793 569 Pfam PF00005 ABC transporter 349 497 6.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0829 4a416fffa238d204dd7e8835fb70a793 569 SUPERFAMILY SSF90123 6 318 2.09E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABED_0829 4a416fffa238d204dd7e8835fb70a793 569 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0829 4a416fffa238d204dd7e8835fb70a793 569 Gene3D G3DSA:3.40.50.300 326 567 3.0E-77 T 14-10-2018 ABED_0829 4a416fffa238d204dd7e8835fb70a793 569 Gene3D G3DSA:1.20.1560.10 1 320 5.7E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABED_0829 4a416fffa238d204dd7e8835fb70a793 569 SUPERFAMILY SSF52540 332 564 3.66E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1051 6e0534d5aae89669edccf45b29654cef 589 SUPERFAMILY SSF90123 10 336 3.66E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABED_1051 6e0534d5aae89669edccf45b29654cef 589 Pfam PF00664 ABC transporter transmembrane region 22 306 4.2E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABED_1051 6e0534d5aae89669edccf45b29654cef 589 SMART SM00382 377 577 5.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1051 6e0534d5aae89669edccf45b29654cef 589 Pfam PF00005 ABC transporter 368 517 3.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1051 6e0534d5aae89669edccf45b29654cef 589 Gene3D G3DSA:1.20.1560.10 7 334 1.5E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABED_1051 6e0534d5aae89669edccf45b29654cef 589 SUPERFAMILY SSF52540 348 588 4.99E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1051 6e0534d5aae89669edccf45b29654cef 589 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_1051 6e0534d5aae89669edccf45b29654cef 589 Gene3D G3DSA:3.40.50.300 343 589 4.8E-81 T 14-10-2018 ABED_0834 8713f641ef95ac539f0ecd93f0daf2b8 134 Gene3D G3DSA:3.10.129.10 1 134 1.3E-38 T 14-10-2018 ABED_0834 8713f641ef95ac539f0ecd93f0daf2b8 134 Pfam PF03061 Thioesterase superfamily 39 108 1.2E-5 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABED_0834 8713f641ef95ac539f0ecd93f0daf2b8 134 PIRSF PIRSF014972 1 134 3.9E-44 T 14-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase ABED_0834 8713f641ef95ac539f0ecd93f0daf2b8 134 SUPERFAMILY SSF54637 2 133 9.61E-35 T 14-10-2018 IPR029069 HotDog domain superfamily ABED_1952 42baa6c8be026ea262d6766b8d6857a2 363 SUPERFAMILY SSF103473 4 358 2.75E-46 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_1952 42baa6c8be026ea262d6766b8d6857a2 363 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 354 1.1E-63 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 ABED_1952 42baa6c8be026ea262d6766b8d6857a2 363 ProSitePatterns PS00216 Sugar transport proteins signature 1. 42 58 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABED_1952 42baa6c8be026ea262d6766b8d6857a2 363 Pfam PF07690 Major Facilitator Superfamily 2 328 9.5E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_1952 42baa6c8be026ea262d6766b8d6857a2 363 Gene3D G3DSA:1.20.1720.10 1 359 3.8E-78 T 14-10-2018 ABED_1341 31763bb9199489ae1fd7083db0af040c 297 PIRSF PIRSF000310 1 297 6.9E-71 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 ABED_1341 31763bb9199489ae1fd7083db0af040c 297 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 17 160 2.2E-27 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1341 31763bb9199489ae1fd7083db0af040c 297 Gene3D G3DSA:4.10.480.10 179 257 5.7E-20 T 14-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily ABED_1341 31763bb9199489ae1fd7083db0af040c 297 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 90 104 1.2E-15 T 14-10-2018 ABED_1341 31763bb9199489ae1fd7083db0af040c 297 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 2 24 1.2E-15 T 14-10-2018 ABED_1341 31763bb9199489ae1fd7083db0af040c 297 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 141 164 1.2E-15 T 14-10-2018 ABED_1341 31763bb9199489ae1fd7083db0af040c 297 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 204 230 1.2E-15 T 14-10-2018 ABED_1341 31763bb9199489ae1fd7083db0af040c 297 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 231 244 1.2E-15 T 14-10-2018 ABED_1341 31763bb9199489ae1fd7083db0af040c 297 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 179 252 4.8E-23 T 14-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal ABED_1341 31763bb9199489ae1fd7083db0af040c 297 Gene3D G3DSA:3.40.50.700 1 178 3.8E-41 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily ABED_1341 31763bb9199489ae1fd7083db0af040c 297 SUPERFAMILY SSF56770 7 252 1.7E-57 T 14-10-2018 ABED_1299 92334abfe1adf193d9e05f238766b609 667 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 186 2.0E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABED_1299 92334abfe1adf193d9e05f238766b609 667 Gene3D G3DSA:3.40.50.720 244 444 1.3E-17 T 14-10-2018 ABED_1299 92334abfe1adf193d9e05f238766b609 667 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 187 1.1E-31 T 14-10-2018 ABED_1299 92334abfe1adf193d9e05f238766b609 667 SUPERFAMILY SSF48179 474 625 1.97E-18 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABED_1299 92334abfe1adf193d9e05f238766b609 667 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 399 613 2.9E-16 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 ABED_1299 92334abfe1adf193d9e05f238766b609 667 Gene3D G3DSA:1.10.150.240 22 88 1.5E-45 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABED_1299 92334abfe1adf193d9e05f238766b609 667 SUPERFAMILY SSF56784 8 195 1.73E-41 T 14-10-2018 IPR036412 HAD-like superfamily ABED_1299 92334abfe1adf193d9e05f238766b609 667 Gene3D G3DSA:3.40.50.1000 10 190 1.5E-45 T 14-10-2018 IPR023214 HAD superfamily ABED_1299 92334abfe1adf193d9e05f238766b609 667 Gene3D G3DSA:1.10.1040.10 472 654 1.9E-30 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABED_1299 92334abfe1adf193d9e05f238766b609 667 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 2.2E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABED_1299 92334abfe1adf193d9e05f238766b609 667 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 2.2E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABED_1299 92334abfe1adf193d9e05f238766b609 667 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 2.2E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 PIRSF PIRSF000722 1 396 7.5E-153 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 Pfam PF00871 Acetokinase family 3 389 6.2E-152 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 Gene3D G3DSA:3.30.420.40 196 396 3.9E-84 T 14-10-2018 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 TIGRFAM TIGR00016 ackA: acetate kinase 2 395 7.0E-158 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 Hamap MF_00020 Acetate kinase [ackA]. 1 396 179.196 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 PRINTS PR00471 Acetate kinase family signature 173 186 2.2E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 PRINTS PR00471 Acetate kinase family signature 202 223 2.2E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 PRINTS PR00471 Acetate kinase family signature 376 388 2.2E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 PRINTS PR00471 Acetate kinase family signature 3 14 2.2E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 PRINTS PR00471 Acetate kinase family signature 299 312 2.2E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 PRINTS PR00471 Acetate kinase family signature 321 337 2.2E-41 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 SUPERFAMILY SSF53067 1 195 5.4E-66 T 14-10-2018 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 SUPERFAMILY SSF53067 157 395 1.59E-87 T 14-10-2018 ABED_0471 077f6bc6f091a0f3bef37df43c514160 396 Gene3D G3DSA:3.30.420.40 1 195 6.4E-68 T 14-10-2018 ABED_0338 f98ca0465d5c3fe5bcc0e1bfeb1647c9 232 SUPERFAMILY SSF52172 13 173 6.83E-31 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0338 f98ca0465d5c3fe5bcc0e1bfeb1647c9 232 SMART SM00448 12 123 1.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0338 f98ca0465d5c3fe5bcc0e1bfeb1647c9 232 Gene3D G3DSA:3.40.50.2300 8 134 1.1E-29 T 14-10-2018 ABED_0338 f98ca0465d5c3fe5bcc0e1bfeb1647c9 232 Pfam PF00072 Response regulator receiver domain 14 123 2.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0338 f98ca0465d5c3fe5bcc0e1bfeb1647c9 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 223 2.5E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0338 f98ca0465d5c3fe5bcc0e1bfeb1647c9 232 Gene3D G3DSA:1.10.10.10 135 232 1.9E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0338 f98ca0465d5c3fe5bcc0e1bfeb1647c9 232 SUPERFAMILY SSF46894 154 224 7.48E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_0338 f98ca0465d5c3fe5bcc0e1bfeb1647c9 232 SMART SM00862 154 225 3.7E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1455 8cfa0f4c08a98039e69ca9ee29a2fc09 207 SUPERFAMILY SSF52317 5 197 2.82E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_1455 8cfa0f4c08a98039e69ca9ee29a2fc09 207 Gene3D G3DSA:3.40.50.880 1 205 1.8E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_1455 8cfa0f4c08a98039e69ca9ee29a2fc09 207 Pfam PF01965 DJ-1/PfpI family 5 178 1.6E-24 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABED_1186 2c15f83f57934efe4ddf27352e06b6a5 177 SUPERFAMILY SSF55729 1 169 1.36E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_1186 2c15f83f57934efe4ddf27352e06b6a5 177 Pfam PF13302 Acetyltransferase (GNAT) domain 7 145 6.8E-26 T 14-10-2018 IPR000182 GNAT domain ABED_1186 2c15f83f57934efe4ddf27352e06b6a5 177 Gene3D G3DSA:3.40.630.30 1 171 1.8E-38 T 14-10-2018 ABED_1353 df993fa53f6393e2742982d250e75cf4 215 Pfam PF13462 Thioredoxin 49 203 6.7E-21 T 14-10-2018 IPR012336 Thioredoxin-like fold ABED_1353 df993fa53f6393e2742982d250e75cf4 215 SUPERFAMILY SSF52833 47 200 1.59E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1353 df993fa53f6393e2742982d250e75cf4 215 Gene3D G3DSA:3.40.30.10 45 215 3.1E-32 T 14-10-2018 ABED_1217 93cc046b63f57939804f8f35fa884422 165 SUPERFAMILY SSF55729 2 157 2.88E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_1217 93cc046b63f57939804f8f35fa884422 165 Gene3D G3DSA:3.40.630.30 13 163 4.6E-12 T 14-10-2018 ABED_1217 93cc046b63f57939804f8f35fa884422 165 Pfam PF00583 Acetyltransferase (GNAT) family 28 133 6.4E-5 T 14-10-2018 IPR000182 GNAT domain ABED_0183 2088e4abe70226fcc002a56e4f263460 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ABED_0183 2088e4abe70226fcc002a56e4f263460 112 SUPERFAMILY SSF54913 2 112 1.59E-44 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ABED_0183 2088e4abe70226fcc002a56e4f263460 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ABED_0183 2088e4abe70226fcc002a56e4f263460 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 6.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_0183 2088e4abe70226fcc002a56e4f263460 112 SMART SM00938 4 105 2.4E-67 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_0183 2088e4abe70226fcc002a56e4f263460 112 PRINTS PR00340 P-II protein signature 23 41 1.0E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_0183 2088e4abe70226fcc002a56e4f263460 112 PRINTS PR00340 P-II protein signature 83 103 1.0E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_0183 2088e4abe70226fcc002a56e4f263460 112 PRINTS PR00340 P-II protein signature 2 17 1.0E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_0183 2088e4abe70226fcc002a56e4f263460 112 PRINTS PR00340 P-II protein signature 52 75 1.0E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_0183 2088e4abe70226fcc002a56e4f263460 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABED_0183 2088e4abe70226fcc002a56e4f263460 112 PIRSF PIRSF039144 1 112 2.0E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABED_1009 983f3f63ad8ac7f7e214acaeed9dd455 193 Gene3D G3DSA:3.40.50.360 1 192 1.1E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_1009 983f3f63ad8ac7f7e214acaeed9dd455 193 Pfam PF02525 Flavodoxin-like fold 2 185 5.5E-36 T 14-10-2018 IPR003680 Flavodoxin-like fold ABED_1009 983f3f63ad8ac7f7e214acaeed9dd455 193 SUPERFAMILY SSF52218 1 190 6.46E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_0526 19e1528eaffac830aad7b01aa34ef1da 75 SMART SM00899 1 73 3.6E-15 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ABED_0526 19e1528eaffac830aad7b01aa34ef1da 75 SUPERFAMILY SSF50037 3 73 1.3E-15 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal ABED_0526 19e1528eaffac830aad7b01aa34ef1da 75 Pfam PF04023 FeoA domain 1 72 2.8E-13 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ABED_0526 19e1528eaffac830aad7b01aa34ef1da 75 Gene3D G3DSA:2.30.30.90 1 75 2.8E-17 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain ABED_0094 e7d0ebfd6abdf42cbc7f6f9aecc7df4c 139 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 138 26.161 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABED_0094 e7d0ebfd6abdf42cbc7f6f9aecc7df4c 139 SUPERFAMILY SSF52161 4 136 4.71E-52 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0094 e7d0ebfd6abdf42cbc7f6f9aecc7df4c 139 Pfam PF00572 Ribosomal protein L13 16 136 4.1E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABED_0094 e7d0ebfd6abdf42cbc7f6f9aecc7df4c 139 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 136 4.7E-57 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0094 e7d0ebfd6abdf42cbc7f6f9aecc7df4c 139 Gene3D G3DSA:3.90.1180.10 2 138 3.3E-55 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0094 e7d0ebfd6abdf42cbc7f6f9aecc7df4c 139 PIRSF PIRSF002181 1 138 5.3E-46 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABED_1103 e423d17093e6d1df5aac08b297593ef1 145 SUPERFAMILY SSF103642 2 22 6.7E-5 T 14-10-2018 ABED_1103 e423d17093e6d1df5aac08b297593ef1 145 SUPERFAMILY SSF54427 30 136 3.07E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily ABED_1103 e423d17093e6d1df5aac08b297593ef1 145 Gene3D G3DSA:3.10.450.50 8 138 6.6E-34 T 14-10-2018 ABED_1795 22e180fd84289ca39347d4a015b9ae6e 288 SUPERFAMILY SSF111331 15 287 5.23E-80 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABED_1795 22e180fd84289ca39347d4a015b9ae6e 288 Hamap MF_00361 NAD kinase [nadK]. 14 286 32.191 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABED_1795 22e180fd84289ca39347d4a015b9ae6e 288 Gene3D G3DSA:2.60.200.30 133 263 1.1E-85 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABED_1795 22e180fd84289ca39347d4a015b9ae6e 288 Gene3D G3DSA:3.40.50.10330 32 286 1.1E-85 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABED_1795 22e180fd84289ca39347d4a015b9ae6e 288 Pfam PF01513 ATP-NAD kinase 67 269 1.1E-46 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABED_2093 babe5c8c7b34a4795197a3bea1b14aca 210 SUPERFAMILY SSF53041 6 150 1.03E-31 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ABED_2093 babe5c8c7b34a4795197a3bea1b14aca 210 SMART SM00857 6 151 5.5E-37 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABED_2093 babe5c8c7b34a4795197a3bea1b14aca 210 Gene3D G3DSA:3.40.50.1390 5 161 3.7E-34 T 14-10-2018 ABED_2093 babe5c8c7b34a4795197a3bea1b14aca 210 Pfam PF00239 Resolvase, N terminal domain 7 149 5.0E-34 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABED_2093 babe5c8c7b34a4795197a3bea1b14aca 210 ProSitePatterns PS00398 Site-specific recombinases signature 2. 66 78 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ABED_2093 babe5c8c7b34a4795197a3bea1b14aca 210 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ABED_0973 79cc9f1ef37e1dc36666ea6e26a3b3bf 224 Gene3D G3DSA:1.10.10.10 131 223 8.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0973 79cc9f1ef37e1dc36666ea6e26a3b3bf 224 SUPERFAMILY SSF52172 5 186 4.7E-26 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0973 79cc9f1ef37e1dc36666ea6e26a3b3bf 224 SMART SM00448 7 118 3.6E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0973 79cc9f1ef37e1dc36666ea6e26a3b3bf 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 222 2.6E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0973 79cc9f1ef37e1dc36666ea6e26a3b3bf 224 SMART SM00862 152 222 2.6E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0973 79cc9f1ef37e1dc36666ea6e26a3b3bf 224 Gene3D G3DSA:3.40.50.2300 5 130 1.6E-23 T 14-10-2018 ABED_0973 79cc9f1ef37e1dc36666ea6e26a3b3bf 224 Pfam PF00072 Response regulator receiver domain 10 118 3.0E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0964 187edadeaa9b3c1df44a4fc5451835b6 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 120 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site ABED_0964 187edadeaa9b3c1df44a4fc5451835b6 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 31.306 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABED_0964 187edadeaa9b3c1df44a4fc5451835b6 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 3.9E-52 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0964 187edadeaa9b3c1df44a4fc5451835b6 130 SUPERFAMILY SSF53137 14 130 2.14E-42 T 14-10-2018 ABED_0964 187edadeaa9b3c1df44a4fc5451835b6 130 PIRSF PIRSF002131 1 130 1.6E-47 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABED_0964 187edadeaa9b3c1df44a4fc5451835b6 130 Pfam PF00411 Ribosomal protein S11 19 129 1.6E-43 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABED_0964 187edadeaa9b3c1df44a4fc5451835b6 130 Gene3D G3DSA:3.30.420.80 1 130 9.9E-49 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0857 7c4e7e526966170a341fbb7d478f8529 147 Gene3D G3DSA:1.10.1510.10 1 90 2.5E-22 T 14-10-2018 ABED_0857 7c4e7e526966170a341fbb7d478f8529 147 SUPERFAMILY SSF89095 1 146 2.2E-36 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ABED_0857 7c4e7e526966170a341fbb7d478f8529 147 Gene3D G3DSA:1.10.10.410 91 147 1.3E-19 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ABED_0857 7c4e7e526966170a341fbb7d478f8529 147 Pfam PF09424 Yqey-like protein 4 146 1.2E-44 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 ABED_0898 8f150ec3a2ed76e0f167ad20c15bb2b5 372 Pfam PF00069 Protein kinase domain 16 214 9.8E-33 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABED_0898 8f150ec3a2ed76e0f167ad20c15bb2b5 372 Gene3D G3DSA:1.10.510.10 11 284 4.0E-38 T 14-10-2018 ABED_0898 8f150ec3a2ed76e0f167ad20c15bb2b5 372 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 133 145 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 ABED_0898 8f150ec3a2ed76e0f167ad20c15bb2b5 372 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 21 50 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 ABED_0898 8f150ec3a2ed76e0f167ad20c15bb2b5 372 SMART SM00220 15 243 3.0E-13 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABED_0898 8f150ec3a2ed76e0f167ad20c15bb2b5 372 SUPERFAMILY SSF56112 8 254 2.02E-41 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily ABED_0898 8f150ec3a2ed76e0f167ad20c15bb2b5 372 SMART SM00219 15 242 6.9E-6 T 14-10-2018 IPR020635 Tyrosine-protein kinase, catalytic domain GO:0004713|GO:0006468 ABED_1298 61159d8315b897739b34ec9b7f37ee4e 395 SUPERFAMILY SSF51161 132 336 1.23E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_1298 61159d8315b897739b34ec9b7f37ee4e 395 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 6 172 1.2E-69 T 14-10-2018 ABED_1298 61159d8315b897739b34ec9b7f37ee4e 395 Gene3D G3DSA:2.160.10.10 215 395 1.2E-56 T 14-10-2018 ABED_1298 61159d8315b897739b34ec9b7f37ee4e 395 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 297 329 4.3E-13 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_1298 61159d8315b897739b34ec9b7f37ee4e 395 Gene3D G3DSA:3.30.70.2010 1 173 6.6E-63 T 14-10-2018 ABED_1298 61159d8315b897739b34ec9b7f37ee4e 395 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 21 395 41.312 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 ABED_1298 61159d8315b897739b34ec9b7f37ee4e 395 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 174 214 1.8E-13 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 ABED_1298 61159d8315b897739b34ec9b7f37ee4e 395 Gene3D G3DSA:3.30.60.70 174 214 9.9E-22 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 ABED_1838 4b8919c8be10fba4d379a82fab6a708f 184 Pfam PF02581 Thiamine monophosphate synthase 4 181 1.6E-23 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABED_1838 4b8919c8be10fba4d379a82fab6a708f 184 SUPERFAMILY SSF51391 2 183 1.44E-25 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABED_1838 4b8919c8be10fba4d379a82fab6a708f 184 Gene3D G3DSA:3.20.20.70 1 184 6.9E-30 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1035 007c30bf8896339882b6836f9ec67d87 146 Pfam PF01957 NfeD-like C-terminal, partner-binding 15 145 1.0E-9 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain ABED_2017 6b8ca75060aa044f7aaaa744d4635f3c 756 SUPERFAMILY SSF53335 150 404 9.97E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_2141 81a9a43c0179c2235e9dea295ea15355 536 SUPERFAMILY SSF53649 228 481 4.25E-18 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABED_2141 81a9a43c0179c2235e9dea295ea15355 536 Pfam PF08019 Domain of unknown function (DUF1705) 51 199 1.7E-51 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 ABED_2141 81a9a43c0179c2235e9dea295ea15355 536 Pfam PF00884 Sulfatase 228 516 1.7E-41 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 ABED_2141 81a9a43c0179c2235e9dea295ea15355 536 Gene3D G3DSA:3.40.720.10 198 536 5.1E-80 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 Gene3D G3DSA:2.60.40.10 202 305 1.3E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 Gene3D G3DSA:2.60.40.10 523 626 1.3E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 Gene3D G3DSA:2.60.40.10 309 412 1.3E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 Gene3D G3DSA:2.60.40.10 416 519 1.3E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 Gene3D G3DSA:2.60.40.10 630 733 2.4E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 SUPERFAMILY SSF51120 1282 1411 3.66E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 PRINTS PR00313 NodO calcium binding signature 1965 1974 2.6E-7 T 14-10-2018 ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 PRINTS PR00313 NodO calcium binding signature 1841 1849 2.6E-7 T 14-10-2018 ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 PRINTS PR00313 NodO calcium binding signature 1572 1583 2.6E-7 T 14-10-2018 ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 PRINTS PR00313 NodO calcium binding signature 1930 1938 2.6E-7 T 14-10-2018 ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 SUPERFAMILY SSF53300 1589 1778 3.12E-28 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 Gene3D G3DSA:3.40.50.410 1585 1785 1.6E-35 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 SMART SM00327 1598 1803 2.2E-15 T 14-10-2018 IPR002035 von Willebrand factor, type A ABED_1974 44b20f2d6b933b736f6cd8fe37edc49b 2085 Pfam PF13519 von Willebrand factor type A domain 1602 1726 8.5E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 61 69 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 Gene3D G3DSA:1.10.1060.10 111 243 4.0E-44 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 13 235 5.2E-52 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 SUPERFAMILY SSF46548 117 240 6.1E-26 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 10 114 1.1E-29 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 Pfam PF13183 4Fe-4S dicluster domain 151 225 6.1E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 SUPERFAMILY SSF54292 8 109 8.13E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABED_0282 43b3d39a8768ba3149f7f5bd11f5b053 243 Gene3D G3DSA:3.10.20.30 5 110 4.4E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily ABED_2056 c122cb2ede6035f876e83e335528aeba 341 Gene3D G3DSA:3.20.20.70 1 271 4.9E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_2056 c122cb2ede6035f876e83e335528aeba 341 SUPERFAMILY SSF51569 11 297 9.0E-89 T 14-10-2018 ABED_2056 c122cb2ede6035f876e83e335528aeba 341 Pfam PF08666 SAF domain 288 332 1.0E-5 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ABED_2056 c122cb2ede6035f876e83e335528aeba 341 Pfam PF03102 NeuB family 34 271 1.4E-94 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 ABED_2056 c122cb2ede6035f876e83e335528aeba 341 Gene3D G3DSA:3.90.1210.10 276 341 3.1E-17 T 14-10-2018 ABED_2056 c122cb2ede6035f876e83e335528aeba 341 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 13 339 6.4E-156 T 14-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 ABED_2056 c122cb2ede6035f876e83e335528aeba 341 SUPERFAMILY SSF51269 283 339 1.05E-15 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 ABED_1599 cd7f5f45d32c00bd3f1432735ed03c8e 226 Gene3D G3DSA:3.40.50.2300 6 135 6.8E-30 T 14-10-2018 ABED_1599 cd7f5f45d32c00bd3f1432735ed03c8e 226 SMART SM00448 9 120 1.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1599 cd7f5f45d32c00bd3f1432735ed03c8e 226 Gene3D G3DSA:1.10.10.10 136 225 3.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1599 cd7f5f45d32c00bd3f1432735ed03c8e 226 SMART SM00862 154 224 6.9E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1599 cd7f5f45d32c00bd3f1432735ed03c8e 226 SUPERFAMILY SSF52172 7 132 4.13E-30 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1599 cd7f5f45d32c00bd3f1432735ed03c8e 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 224 2.1E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1599 cd7f5f45d32c00bd3f1432735ed03c8e 226 SUPERFAMILY SSF46894 142 224 3.12E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_1599 cd7f5f45d32c00bd3f1432735ed03c8e 226 Pfam PF00072 Response regulator receiver domain 11 119 1.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1978 71aa23cab7cc88910fa53c8a51c47794 220 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 60 210 1.6E-23 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABED_1978 71aa23cab7cc88910fa53c8a51c47794 220 SUPERFAMILY SSF52266 38 219 8.25E-42 T 14-10-2018 ABED_1978 71aa23cab7cc88910fa53c8a51c47794 220 Gene3D G3DSA:3.40.50.1110 18 220 4.4E-43 T 14-10-2018 IPR036514 SGNH hydrolase superfamily ABED_0676 bab6c0215c4419480c31995c344984dd 358 PIRSF PIRSF000138 2 358 2.5E-118 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 ABED_0676 bab6c0215c4419480c31995c344984dd 358 SUPERFAMILY SSF51395 11 356 3.36E-92 T 14-10-2018 ABED_0676 bab6c0215c4419480c31995c344984dd 358 Gene3D G3DSA:3.20.20.70 11 358 2.2E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0676 bab6c0215c4419480c31995c344984dd 358 Pfam PF01070 FMN-dependent dehydrogenase 22 356 5.4E-117 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 ABED_1130 662f03d19712ffec4365962b507b3592 209 Gene3D G3DSA:3.40.50.300 9 113 1.1E-16 T 14-10-2018 ABED_1130 662f03d19712ffec4365962b507b3592 209 Pfam PF13177 DNA polymerase III, delta subunit 32 111 3.1E-15 T 14-10-2018 ABED_1130 662f03d19712ffec4365962b507b3592 209 SUPERFAMILY SSF52540 30 128 2.1E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1717 6e0a48db862bec0fabd77ff00e57c913 229 Pfam PF00005 ABC transporter 18 145 9.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1717 6e0a48db862bec0fabd77ff00e57c913 229 Gene3D G3DSA:3.40.50.300 1 227 1.5E-51 T 14-10-2018 ABED_1717 6e0a48db862bec0fabd77ff00e57c913 229 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_1717 6e0a48db862bec0fabd77ff00e57c913 229 SUPERFAMILY SSF52540 16 221 3.85E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1717 6e0a48db862bec0fabd77ff00e57c913 229 SMART SM00382 23 195 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 PIRSF PIRSF005814 34 733 3.0E-106 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 SMART SM00463 656 731 2.1E-11 T 14-10-2018 IPR002625 Smr domain ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 Gene3D G3DSA:3.30.1370.110 649 733 2.7E-22 T 14-10-2018 ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 SMART SM00534 300 483 1.5E-28 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 Gene3D G3DSA:3.40.50.300 269 592 3.8E-38 T 14-10-2018 ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 SUPERFAMILY SSF160443 657 732 6.15E-11 T 14-10-2018 IPR036063 Smr domain superfamily ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 1 733 19.027 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 SMART SM00533 5 291 1.1E-4 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 SUPERFAMILY SSF52540 279 487 6.28E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 Pfam PF00488 MutS domain V 304 482 4.2E-16 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABED_1088 20ce8bde79ed85b3c832d0ddf110ba9f 733 Pfam PF01713 Smr domain 659 733 2.7E-19 T 14-10-2018 IPR002625 Smr domain ABED_0689 3c02084a02ad5cd601084dd9cca7007e 354 SUPERFAMILY SSF55120 4 354 5.47E-87 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0689 3c02084a02ad5cd601084dd9cca7007e 354 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 184 352 4.0E-16 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0689 3c02084a02ad5cd601084dd9cca7007e 354 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 10 182 3.8E-43 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0689 3c02084a02ad5cd601084dd9cca7007e 354 Gene3D G3DSA:3.30.2350.20 190 351 1.0E-12 T 14-10-2018 ABED_0689 3c02084a02ad5cd601084dd9cca7007e 354 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 2 354 25.527 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0689 3c02084a02ad5cd601084dd9cca7007e 354 Gene3D G3DSA:3.30.2350.20 1 186 2.2E-51 T 14-10-2018 ABED_0689 3c02084a02ad5cd601084dd9cca7007e 354 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 354 2.4E-69 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0025 f5e26b7155f8948603b7c36fee9a3b56 316 SUPERFAMILY SSF103088 198 314 4.45E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0025 f5e26b7155f8948603b7c36fee9a3b56 316 PRINTS PR01021 OMPA domain signature 259 275 1.9E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_0025 f5e26b7155f8948603b7c36fee9a3b56 316 PRINTS PR01021 OMPA domain signature 244 259 1.9E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ABED_0025 f5e26b7155f8948603b7c36fee9a3b56 316 Pfam PF00691 OmpA family 214 302 2.2E-20 T 14-10-2018 IPR006665 OmpA-like domain ABED_0025 f5e26b7155f8948603b7c36fee9a3b56 316 Gene3D G3DSA:3.30.1330.60 173 316 4.5E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily ABED_0077 cf51022292428f708bd590f0ce0f2be5 489 SUPERFAMILY SSF51905 59 419 7.26E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0077 cf51022292428f708bd590f0ce0f2be5 489 SUPERFAMILY SSF51905 210 351 2.1E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0077 cf51022292428f708bd590f0ce0f2be5 489 Gene3D G3DSA:3.50.50.100 57 487 7.9E-77 T 14-10-2018 ABED_0077 cf51022292428f708bd590f0ce0f2be5 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 59 179 9.4E-11 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABED_0156 107674144f6bb8e7a75dfede6fd503e8 115 Gene3D G3DSA:3.30.780.10 42 114 6.3E-20 T 14-10-2018 ABED_0156 107674144f6bb8e7a75dfede6fd503e8 115 Pfam PF01253 Translation initiation factor SUI1 46 110 1.6E-14 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 ABED_0156 107674144f6bb8e7a75dfede6fd503e8 115 SUPERFAMILY SSF55159 33 114 1.57E-18 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 ABED_0156 107674144f6bb8e7a75dfede6fd503e8 115 PIRSF PIRSF037511 6 115 9.1E-24 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 ABED_0828 e7d008fcad92b8eebd4eb8b8d5bf7406 352 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 4 351 6.9E-123 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ABED_0828 e7d008fcad92b8eebd4eb8b8d5bf7406 352 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 287 307 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ABED_0828 e7d008fcad92b8eebd4eb8b8d5bf7406 352 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 86 105 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ABED_0828 e7d008fcad92b8eebd4eb8b8d5bf7406 352 PIRSF PIRSF000164 15 352 1.2E-97 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 ABED_0828 e7d008fcad92b8eebd4eb8b8d5bf7406 352 SUPERFAMILY SSF51395 4 350 8.55E-94 T 14-10-2018 ABED_0828 e7d008fcad92b8eebd4eb8b8d5bf7406 352 Pfam PF01180 Dihydroorotate dehydrogenase 51 335 3.2E-77 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ABED_0828 e7d008fcad92b8eebd4eb8b8d5bf7406 352 Gene3D G3DSA:3.20.20.70 1 352 3.6E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0950 d2dda4df290dd7fea38a208f042b8480 369 Pfam PF01098 Cell cycle protein 9 356 1.5E-82 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1187 c380d819ba5e874b5af31795a7edd414 243 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 233 1.2E-73 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 ABED_1187 c380d819ba5e874b5af31795a7edd414 243 Gene3D G3DSA:3.90.550.10 1 240 4.9E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1187 c380d819ba5e874b5af31795a7edd414 243 Pfam PF02348 Cytidylyltransferase 1 214 6.1E-48 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 ABED_1187 c380d819ba5e874b5af31795a7edd414 243 SUPERFAMILY SSF53448 2 241 2.7E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0485 71bcc9b0b1b6bd65d0b17d9bee3cf9ad 452 Gene3D G3DSA:3.50.50.60 155 268 7.1E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0485 71bcc9b0b1b6bd65d0b17d9bee3cf9ad 452 Gene3D G3DSA:3.50.50.60 3 127 2.8E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0485 71bcc9b0b1b6bd65d0b17d9bee3cf9ad 452 SUPERFAMILY SSF51905 4 283 4.79E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0485 71bcc9b0b1b6bd65d0b17d9bee3cf9ad 452 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 419 3.2E-23 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ABED_2147 b62f52bee181a2846b849828065b45c2 107 Pfam PF09626 Dihaem cytochrome c 1 93 1.2E-24 T 14-10-2018 IPR018588 Dihaem cytochrome c ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 SUPERFAMILY SSF56645 5 215 5.89E-47 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 109 1.2E-19 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 Gene3D G3DSA:1.20.140.10 230 368 3.2E-19 T 14-10-2018 ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 PIRSF PIRSF016578 4 373 3.1E-19 T 14-10-2018 ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 368 7.9E-12 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 SUPERFAMILY SSF47203 218 372 8.05E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 Gene3D G3DSA:2.40.110.10 112 226 2.4E-15 T 14-10-2018 ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 113 206 5.1E-11 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABED_1004 cc64e2544748c54c16aa734e30c39a0b 375 Gene3D G3DSA:1.10.540.10 2 111 2.6E-25 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABED_1777 44295aa0a90a2d2dd62c6e036d5b2bbb 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 5.9E-23 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABED_1777 44295aa0a90a2d2dd62c6e036d5b2bbb 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.7E-49 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABED_1777 44295aa0a90a2d2dd62c6e036d5b2bbb 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 3.1E-31 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABED_1777 44295aa0a90a2d2dd62c6e036d5b2bbb 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 5 260 1.2E-106 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 ABED_1777 44295aa0a90a2d2dd62c6e036d5b2bbb 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ABED_1777 44295aa0a90a2d2dd62c6e036d5b2bbb 262 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABED_1777 44295aa0a90a2d2dd62c6e036d5b2bbb 262 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 241 7.1E-54 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 ABED_1777 44295aa0a90a2d2dd62c6e036d5b2bbb 262 SUPERFAMILY SSF117143 92 222 5.49E-36 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABED_0540 5cac4cd3b7c200c002c93a69b61f6f5c 437 PRINTS PR01035 Tetracycline resistance protein signature 132 154 2.0E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABED_0540 5cac4cd3b7c200c002c93a69b61f6f5c 437 PRINTS PR01035 Tetracycline resistance protein signature 14 30 2.0E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABED_0540 5cac4cd3b7c200c002c93a69b61f6f5c 437 PRINTS PR01035 Tetracycline resistance protein signature 266 287 2.0E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABED_0540 5cac4cd3b7c200c002c93a69b61f6f5c 437 Pfam PF07690 Major Facilitator Superfamily 9 342 2.0E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_0540 5cac4cd3b7c200c002c93a69b61f6f5c 437 Gene3D G3DSA:1.20.1250.20 3 381 2.7E-77 T 14-10-2018 ABED_0540 5cac4cd3b7c200c002c93a69b61f6f5c 437 SUPERFAMILY SSF103473 5 383 8.5E-68 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_0907 760fe8fb775c3126cc121741d868af3d 135 SUPERFAMILY SSF55785 15 103 3.14E-24 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0907 760fe8fb775c3126cc121741d868af3d 135 Gene3D G3DSA:3.30.450.20 4 134 5.7E-21 T 14-10-2018 ABED_0907 760fe8fb775c3126cc121741d868af3d 135 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 108 2.8E-9 T 14-10-2018 IPR000014 PAS domain ABED_0907 760fe8fb775c3126cc121741d868af3d 135 Pfam PF08447 PAS fold 26 104 2.5E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_0677 e826f1d285deed8f601dc423dc59857c 754 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 737 754 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site ABED_0677 e826f1d285deed8f601dc423dc59857c 754 SUPERFAMILY SSF56935 31 754 5.23E-127 T 14-10-2018 ABED_0677 e826f1d285deed8f601dc423dc59857c 754 Gene3D G3DSA:2.40.170.20 170 754 9.2E-125 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_0677 e826f1d285deed8f601dc423dc59857c 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 159 2.9E-28 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_0677 e826f1d285deed8f601dc423dc59857c 754 Pfam PF00593 TonB dependent receptor 247 753 7.0E-55 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_0677 e826f1d285deed8f601dc423dc59857c 754 Gene3D G3DSA:2.170.130.10 29 164 1.5E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_0790 f6f7eebbd47de85534b27c005fffbd68 148 SUPERFAMILY SSF53271 2 139 4.46E-26 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like ABED_0790 f6f7eebbd47de85534b27c005fffbd68 148 Pfam PF00156 Phosphoribosyl transferase domain 24 147 7.6E-26 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABED_0790 f6f7eebbd47de85534b27c005fffbd68 148 Gene3D G3DSA:3.40.50.2020 1 147 2.3E-34 T 14-10-2018 ABED_2149 bb8e38b46d941662a82abd5198201262 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 3.3E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_2149 bb8e38b46d941662a82abd5198201262 221 Gene3D G3DSA:1.10.10.10 123 221 2.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_2149 bb8e38b46d941662a82abd5198201262 221 Gene3D G3DSA:3.40.50.2300 2 122 9.9E-32 T 14-10-2018 ABED_2149 bb8e38b46d941662a82abd5198201262 221 SMART SM00862 144 219 5.8E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_2149 bb8e38b46d941662a82abd5198201262 221 SMART SM00448 3 114 5.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_2149 bb8e38b46d941662a82abd5198201262 221 Pfam PF00072 Response regulator receiver domain 5 114 6.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_2149 bb8e38b46d941662a82abd5198201262 221 SUPERFAMILY SSF52172 3 167 1.81E-33 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0528 3da272c8bdf6dfd5c186a2fca669f554 246 Pfam PF00005 ABC transporter 19 160 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0528 3da272c8bdf6dfd5c186a2fca669f554 246 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0528 3da272c8bdf6dfd5c186a2fca669f554 246 Gene3D G3DSA:3.40.50.300 2 235 2.1E-60 T 14-10-2018 ABED_0528 3da272c8bdf6dfd5c186a2fca669f554 246 SMART SM00382 28 208 9.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0528 3da272c8bdf6dfd5c186a2fca669f554 246 SUPERFAMILY SSF52540 3 209 2.71E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1265 44df8374311c6a78b0dfbe82d5575197 389 Gene3D G3DSA:3.50.50.60 6 365 5.1E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1265 44df8374311c6a78b0dfbe82d5575197 389 SUPERFAMILY SSF51905 2 181 1.21E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1265 44df8374311c6a78b0dfbe82d5575197 389 Pfam PF01266 FAD dependent oxidoreductase 5 360 3.9E-19 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABED_1265 44df8374311c6a78b0dfbe82d5575197 389 Gene3D G3DSA:3.30.9.10 85 297 5.1E-40 T 14-10-2018 ABED_1567 6569bb5253b248cc2e2089830552df6c 667 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 3.5E-15 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABED_1567 6569bb5253b248cc2e2089830552df6c 667 SUPERFAMILY SSF58104 243 606 8.11E-55 T 14-10-2018 ABED_1567 6569bb5253b248cc2e2089830552df6c 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 582 1.6E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1567 6569bb5253b248cc2e2089830552df6c 667 SMART SM00283 369 618 8.7E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1567 6569bb5253b248cc2e2089830552df6c 667 Gene3D G3DSA:1.10.287.950 318 610 1.4E-57 T 14-10-2018 ABED_1755 a7a3bcb591038ebbc39f3267d69aee07 106 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 6 106 16.403 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABED_1755 a7a3bcb591038ebbc39f3267d69aee07 106 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 106 1.5E-21 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABED_1755 a7a3bcb591038ebbc39f3267d69aee07 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 36 52 1.3E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABED_1755 a7a3bcb591038ebbc39f3267d69aee07 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 70 86 1.3E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABED_1755 a7a3bcb591038ebbc39f3267d69aee07 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 91 104 1.3E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABED_1755 a7a3bcb591038ebbc39f3267d69aee07 106 Pfam PF02049 Flagellar hook-basal body complex protein FliE 22 106 1.8E-23 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABED_1594 4c0347eef3967e825a131c40af4acdb7 412 Pfam PF00171 Aldehyde dehydrogenase family 3 276 2.0E-10 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABED_1594 4c0347eef3967e825a131c40af4acdb7 412 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 338 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABED_1594 4c0347eef3967e825a131c40af4acdb7 412 PIRSF PIRSF000151 1 411 1.6E-169 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ABED_1594 4c0347eef3967e825a131c40af4acdb7 412 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 38.614 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABED_1594 4c0347eef3967e825a131c40af4acdb7 412 Gene3D G3DSA:3.40.309.10 221 368 8.2E-161 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABED_1594 4c0347eef3967e825a131c40af4acdb7 412 SUPERFAMILY SSF53720 2 410 4.19E-104 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABED_1594 4c0347eef3967e825a131c40af4acdb7 412 Gene3D G3DSA:3.40.605.10 13 405 8.2E-161 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABED_1594 4c0347eef3967e825a131c40af4acdb7 412 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 8 400 1.1E-143 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABED_0089 db280dc1656e3c5cb6c0a0e85fefa91d 256 Pfam PF00005 ABC transporter 24 181 6.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0089 db280dc1656e3c5cb6c0a0e85fefa91d 256 Gene3D G3DSA:3.40.50.300 4 252 2.0E-61 T 14-10-2018 ABED_0089 db280dc1656e3c5cb6c0a0e85fefa91d 256 SUPERFAMILY SSF52540 9 242 1.54E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0089 db280dc1656e3c5cb6c0a0e85fefa91d 256 SMART SM00382 33 231 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0089 db280dc1656e3c5cb6c0a0e85fefa91d 256 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 9 256 9.3E-121 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 ABED_0089 db280dc1656e3c5cb6c0a0e85fefa91d 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0039 288ee5d651a8af14cd431fd6d9933e30 147 Gene3D G3DSA:3.40.140.10 2 146 6.3E-47 T 14-10-2018 ABED_0039 288ee5d651a8af14cd431fd6d9933e30 147 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 118 3.0E-30 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABED_0039 288ee5d651a8af14cd431fd6d9933e30 147 PIRSF PIRSF006019 1 146 5.2E-50 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABED_0039 288ee5d651a8af14cd431fd6d9933e30 147 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 107 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABED_0039 288ee5d651a8af14cd431fd6d9933e30 147 SUPERFAMILY SSF53927 2 143 4.52E-42 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABED_2153 f682d9e89ae720aab20a60eee3f10fd9 525 SMART SM00471 344 481 7.6E-9 T 14-10-2018 IPR003607 HD/PDEase domain ABED_2153 f682d9e89ae720aab20a60eee3f10fd9 525 SUPERFAMILY SSF109604 326 512 3.01E-40 T 14-10-2018 ABED_2153 f682d9e89ae720aab20a60eee3f10fd9 525 Pfam PF01966 HD domain 349 471 1.9E-20 T 14-10-2018 IPR006674 HD domain ABED_2153 f682d9e89ae720aab20a60eee3f10fd9 525 Gene3D G3DSA:1.10.3210.10 323 525 5.3E-73 T 14-10-2018 ABED_1442 7003565c7e686fbbcc289bfc38a9ea3f 884 Pfam PF02470 MlaD protein 403 457 3.0E-6 T 14-10-2018 IPR003399 Mce/MlaD ABED_1442 7003565c7e686fbbcc289bfc38a9ea3f 884 Pfam PF02470 MlaD protein 290 376 4.5E-9 T 14-10-2018 IPR003399 Mce/MlaD ABED_1442 7003565c7e686fbbcc289bfc38a9ea3f 884 Pfam PF02470 MlaD protein 643 706 1.7E-8 T 14-10-2018 IPR003399 Mce/MlaD ABED_1442 7003565c7e686fbbcc289bfc38a9ea3f 884 Pfam PF02470 MlaD protein 47 138 9.8E-9 T 14-10-2018 IPR003399 Mce/MlaD ABED_1442 7003565c7e686fbbcc289bfc38a9ea3f 884 Pfam PF02470 MlaD protein 760 825 6.0E-8 T 14-10-2018 IPR003399 Mce/MlaD ABED_1008 3f3647afbda539c4bcede2467925498e 123 Gene3D G3DSA:1.10.10.10 4 121 2.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1008 3f3647afbda539c4bcede2467925498e 123 SUPERFAMILY SSF46785 1 107 6.07E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1008 3f3647afbda539c4bcede2467925498e 123 Pfam PF01638 HxlR-like helix-turn-helix 21 106 1.9E-31 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type ABED_1617 afe78d2313f8f1c37a34c57c24e340b1 170 PIRSF PIRSF026509 1 170 9.4E-45 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 ABED_1617 afe78d2313f8f1c37a34c57c24e340b1 170 Pfam PF03350 Uncharacterized protein family, UPF0114 10 135 8.2E-33 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PIRSF PIRSF000310 51 409 6.4E-138 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 SUPERFAMILY SSF56770 95 355 2.62E-85 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 Gene3D G3DSA:3.40.50.700 92 274 3.4E-66 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 280 298 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 304 330 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 93 115 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 236 259 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 162 185 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 262 279 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 332 345 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 207 231 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 140 8.9E-69 T 14-10-2018 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 53 405 6.1E-137 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 275 354 3.8E-32 T 14-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 Gene3D G3DSA:4.10.480.10 277 391 5.2E-43 T 14-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily ABED_1339 dccb1e57506e4e5c758979b4f85bf962 411 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 108 255 1.6E-30 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0822 ac6a3ed1a22bb5d7d883ef26554b7953 430 Pfam PF00589 Phage integrase family 247 369 9.9E-13 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABED_0822 ac6a3ed1a22bb5d7d883ef26554b7953 430 Gene3D G3DSA:1.10.443.10 220 378 1.7E-20 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABED_0822 ac6a3ed1a22bb5d7d883ef26554b7953 430 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 119 173 1.3E-8 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABED_0822 ac6a3ed1a22bb5d7d883ef26554b7953 430 SUPERFAMILY SSF56349 118 370 1.32E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABED_0822 ac6a3ed1a22bb5d7d883ef26554b7953 430 Gene3D G3DSA:1.10.150.130 112 198 4.4E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal ABED_0251 acba599e5b0a47b363d27f5090fb73a2 249 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 3.3E-44 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABED_0999 81adfa7753ef12365aa80adcb1be5713 268 Pfam PF12833 Helix-turn-helix domain 188 264 1.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_0999 81adfa7753ef12365aa80adcb1be5713 268 SMART SM00342 181 264 1.7E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_0999 81adfa7753ef12365aa80adcb1be5713 268 Gene3D G3DSA:1.10.10.60 161 268 2.6E-20 T 14-10-2018 ABED_0999 81adfa7753ef12365aa80adcb1be5713 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 260 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABED_0999 81adfa7753ef12365aa80adcb1be5713 268 SUPERFAMILY SSF46689 218 266 3.27E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0996 982f41c2514ff72b9f9e4bd542a7841a 451 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 443 9.9E-24 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 ABED_1292 bd519a9aa719ad4fbc5393d178a60375 116 SUPERFAMILY SSF52833 3 115 5.16E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1292 bd519a9aa719ad4fbc5393d178a60375 116 Pfam PF03960 ArsC family 39 113 2.7E-14 T 14-10-2018 IPR006660 Arsenate reductase-like ABED_1292 bd519a9aa719ad4fbc5393d178a60375 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 115 2.2E-39 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 ABED_1292 bd519a9aa719ad4fbc5393d178a60375 116 Gene3D G3DSA:3.40.30.10 1 116 1.1E-42 T 14-10-2018 ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 SMART SM00671 88 122 5.5E-4 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 SMART SM00671 123 158 5.6E-9 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 SMART SM00671 195 230 2.4E-8 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 SMART SM00671 52 87 8.9E-11 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 SMART SM00671 159 194 6.7E-7 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 SUPERFAMILY SSF81901 26 240 1.74E-47 T 14-10-2018 ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 Pfam PF08238 Sel1 repeat 124 158 6.7E-7 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 Pfam PF08238 Sel1 repeat 195 229 4.8E-5 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 Pfam PF08238 Sel1 repeat 159 194 0.0046 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 Pfam PF08238 Sel1 repeat 52 87 2.0E-8 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 Pfam PF08238 Sel1 repeat 90 121 4.0E-4 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0532 71e9cb93c3e27d03b8615a5cf1abd873 242 Gene3D G3DSA:1.25.40.10 20 242 8.3E-63 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0391 11884d21ac1933ce1ebb83e9b38014ff 368 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 2 361 7.7E-81 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ABED_0391 11884d21ac1933ce1ebb83e9b38014ff 368 Gene3D G3DSA:2.40.30.10 171 310 5.4E-83 T 14-10-2018 ABED_0391 11884d21ac1933ce1ebb83e9b38014ff 368 Gene3D G3DSA:3.50.50.60 1 359 5.4E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0391 11884d21ac1933ce1ebb83e9b38014ff 368 Pfam PF03486 HI0933-like protein 1 362 9.9E-81 T 14-10-2018 ABED_0391 11884d21ac1933ce1ebb83e9b38014ff 368 Gene3D G3DSA:1.10.8.260 242 293 5.4E-83 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily ABED_0391 11884d21ac1933ce1ebb83e9b38014ff 368 SUPERFAMILY SSF160996 172 311 1.16E-25 T 14-10-2018 ABED_0391 11884d21ac1933ce1ebb83e9b38014ff 368 SUPERFAMILY SSF51905 12 365 9.73E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1769 7b74e8c35b749f66bbd73b3e1b3d4c3d 95 Gene3D G3DSA:2.30.330.10 1 89 1.0E-19 T 14-10-2018 IPR036429 SpoA-like superfamily ABED_1769 7b74e8c35b749f66bbd73b3e1b3d4c3d 95 SUPERFAMILY SSF101801 6 84 2.09E-18 T 14-10-2018 IPR036429 SpoA-like superfamily ABED_1769 7b74e8c35b749f66bbd73b3e1b3d4c3d 95 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 56 3.9E-17 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABED_1769 7b74e8c35b749f66bbd73b3e1b3d4c3d 95 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 71 3.9E-17 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABED_1769 7b74e8c35b749f66bbd73b3e1b3d4c3d 95 PRINTS PR00956 Flagellar motor switch protein FliN signature 27 43 3.9E-17 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABED_1769 7b74e8c35b749f66bbd73b3e1b3d4c3d 95 PRINTS PR00956 Flagellar motor switch protein FliN signature 10 26 3.9E-17 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABED_1769 7b74e8c35b749f66bbd73b3e1b3d4c3d 95 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 11 79 2.1E-19 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) ABED_2026 7f6d9850329f27d6e0f69f5a896c777e 147 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 144 6.5E-56 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABED_2026 7f6d9850329f27d6e0f69f5a896c777e 147 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 146 33.836 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABED_2026 7f6d9850329f27d6e0f69f5a896c777e 147 Pfam PF07977 FabA-like domain 11 138 2.4E-36 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABED_2026 7f6d9850329f27d6e0f69f5a896c777e 147 Gene3D G3DSA:3.10.129.10 1 147 6.8E-58 T 14-10-2018 ABED_2026 7f6d9850329f27d6e0f69f5a896c777e 147 SUPERFAMILY SSF54637 1 144 3.51E-46 T 14-10-2018 IPR029069 HotDog domain superfamily ABED_1359 4b2bce46ee7df4bd85ddce7add5d2acc 479 Gene3D G3DSA:3.30.450.20 160 287 7.1E-7 T 14-10-2018 ABED_1359 4b2bce46ee7df4bd85ddce7add5d2acc 479 Pfam PF02743 Cache domain 67 270 2.3E-13 T 14-10-2018 IPR033479 Double Cache domain 1 ABED_1359 4b2bce46ee7df4bd85ddce7add5d2acc 479 SMART SM00267 308 479 4.3E-52 T 14-10-2018 IPR000160 GGDEF domain ABED_1359 4b2bce46ee7df4bd85ddce7add5d2acc 479 Gene3D G3DSA:3.30.70.270 308 479 3.3E-48 T 14-10-2018 ABED_1359 4b2bce46ee7df4bd85ddce7add5d2acc 479 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 319 478 1.1E-44 T 14-10-2018 IPR000160 GGDEF domain ABED_1359 4b2bce46ee7df4bd85ddce7add5d2acc 479 SUPERFAMILY SSF55073 324 477 7.14E-41 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1359 4b2bce46ee7df4bd85ddce7add5d2acc 479 Pfam PF00990 Diguanylate cyclase, GGDEF domain 320 475 8.4E-43 T 14-10-2018 IPR000160 GGDEF domain ABED_0978 91af340631b0a85c6f94d2b7194519e8 706 Gene3D G3DSA:2.40.30.170 449 628 1.3E-13 T 14-10-2018 ABED_0978 91af340631b0a85c6f94d2b7194519e8 706 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 458 622 5.4E-8 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_0978 91af340631b0a85c6f94d2b7194519e8 706 Gene3D G3DSA:1.10.287.470 487 546 1.3E-13 T 14-10-2018 ABED_0978 91af340631b0a85c6f94d2b7194519e8 706 Gene3D G3DSA:2.40.50.100 453 582 1.3E-13 T 14-10-2018 ABED_0978 91af340631b0a85c6f94d2b7194519e8 706 SUPERFAMILY SSF111369 444 558 4.45E-7 T 14-10-2018 ABED_0918 7301f06dfcf8408a992e56eb4cf8ae14 442 SUPERFAMILY SSF52540 3 438 1.28E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0918 7301f06dfcf8408a992e56eb4cf8ae14 442 Gene3D G3DSA:1.10.8.60 334 439 4.8E-35 T 14-10-2018 ABED_0918 7301f06dfcf8408a992e56eb4cf8ae14 442 SMART SM01086 334 430 4.1E-21 T 14-10-2018 IPR019489 Clp ATPase, C-terminal ABED_0918 7301f06dfcf8408a992e56eb4cf8ae14 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 156 6.0E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_0918 7301f06dfcf8408a992e56eb4cf8ae14 442 SMART SM00382 48 331 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0918 7301f06dfcf8408a992e56eb4cf8ae14 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 442 3.1E-184 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ABED_0918 7301f06dfcf8408a992e56eb4cf8ae14 442 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 404 4.4E-8 T 14-10-2018 IPR019489 Clp ATPase, C-terminal ABED_0918 7301f06dfcf8408a992e56eb4cf8ae14 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 195 327 9.2E-36 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_0771 3e2f0fc693c412c73161ae6a51091a53 70 Pfam PF01361 Tautomerase enzyme 2 62 7.8E-15 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 ABED_0771 3e2f0fc693c412c73161ae6a51091a53 70 SUPERFAMILY SSF55331 2 67 8.32E-14 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily ABED_0771 3e2f0fc693c412c73161ae6a51091a53 70 Gene3D G3DSA:3.30.429.10 2 68 1.2E-19 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily ABED_0771 3e2f0fc693c412c73161ae6a51091a53 70 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 66 1.1E-20 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 ABED_0410 9d5a67fe278fd7a16e9355d56628a9e7 243 Pfam PF00149 Calcineurin-like phosphoesterase 22 182 3.2E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABED_0410 9d5a67fe278fd7a16e9355d56628a9e7 243 Gene3D G3DSA:3.60.21.10 20 202 8.1E-25 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like ABED_0410 9d5a67fe278fd7a16e9355d56628a9e7 243 SUPERFAMILY SSF56300 18 240 3.52E-33 T 14-10-2018 ABED_0277 4e0d7174c946fdb8e80631bca068d3b1 333 Pfam PF02504 Fatty acid synthesis protein 2 316 5.1E-114 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 ABED_0277 4e0d7174c946fdb8e80631bca068d3b1 333 PIRSF PIRSF002465 1 333 8.8E-123 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ABED_0277 4e0d7174c946fdb8e80631bca068d3b1 333 Gene3D G3DSA:3.40.718.10 1 332 8.9E-126 T 14-10-2018 ABED_0277 4e0d7174c946fdb8e80631bca068d3b1 333 SUPERFAMILY SSF53659 1 328 1.44E-99 T 14-10-2018 ABED_0277 4e0d7174c946fdb8e80631bca068d3b1 333 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 327 3.3E-120 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ABED_0277 4e0d7174c946fdb8e80631bca068d3b1 333 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 333 137.47 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ABED_1731 b3c3fa1e2f445d36223bd8a846d20c7c 99 Gene3D G3DSA:3.30.1390.10 1 99 2.8E-38 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABED_1731 b3c3fa1e2f445d36223bd8a846d20c7c 99 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 17 94 8.2E-32 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 ABED_1731 b3c3fa1e2f445d36223bd8a846d20c7c 99 SUPERFAMILY SSF54736 15 98 1.31E-27 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABED_1731 b3c3fa1e2f445d36223bd8a846d20c7c 99 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 1 94 24.686 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS ABED_1351 b8ca2507e840ca09105f85b2237f590b 211 Gene3D G3DSA:3.40.50.1000 6 184 2.4E-41 T 14-10-2018 IPR023214 HAD superfamily ABED_1351 b8ca2507e840ca09105f85b2237f590b 211 Gene3D G3DSA:1.10.150.240 17 80 2.4E-41 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABED_1351 b8ca2507e840ca09105f85b2237f590b 211 SUPERFAMILY SSF56784 1 210 4.99E-42 T 14-10-2018 IPR036412 HAD-like superfamily ABED_1351 b8ca2507e840ca09105f85b2237f590b 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 183 5.5E-32 T 14-10-2018 ABED_1351 b8ca2507e840ca09105f85b2237f590b 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 178 3.2E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABED_0022 fe94dcbae9974e0cee6377d8795808c2 486 Pfam PF04326 Putative DNA-binding domain 16 137 3.0E-15 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 ABED_0022 fe94dcbae9974e0cee6377d8795808c2 486 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 318 400 7.9E-21 T 14-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain ABED_0022 fe94dcbae9974e0cee6377d8795808c2 486 Gene3D G3DSA:3.30.565.60 241 402 5.4E-29 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily ABED_0022 fe94dcbae9974e0cee6377d8795808c2 486 Gene3D G3DSA:3.30.950.30 2 141 7.1E-18 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily ABED_0252 63ed588a2d15955517fc97f396806e85 188 Pfam PF04982 HPP family 52 173 8.9E-43 T 14-10-2018 IPR007065 HPP ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 Gene3D G3DSA:1.20.1180.10 194 260 6.3E-19 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 Gene3D G3DSA:2.160.10.10 1 190 1.7E-47 T 14-10-2018 ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 PIRSF PIRSF000456 1 260 7.4E-101 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 SUPERFAMILY SSF51161 3 234 3.58E-68 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 255 1.1E-21 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 255 5.2E-101 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 4.9E-10 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 1.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_2025 57fe7eacbdcd2c2bafc15ac0ee871698 260 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 257 44.277 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ABED_1095 6d4eac1490087f34f664a1855fd6c8af 306 Pfam PF02541 Ppx/GppA phosphatase family 27 301 6.5E-34 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 ABED_1095 6d4eac1490087f34f664a1855fd6c8af 306 SUPERFAMILY SSF53067 130 301 3.45E-25 T 14-10-2018 ABED_1095 6d4eac1490087f34f664a1855fd6c8af 306 Gene3D G3DSA:3.30.420.40 1 123 1.4E-22 T 14-10-2018 ABED_1095 6d4eac1490087f34f664a1855fd6c8af 306 SUPERFAMILY SSF53067 8 121 1.3E-20 T 14-10-2018 ABED_1095 6d4eac1490087f34f664a1855fd6c8af 306 Gene3D G3DSA:3.30.420.150 129 305 9.7E-32 T 14-10-2018 ABED_0163 b97eec884b59381ca6ae66ba3bcbd4ee 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 587 1.8E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0163 b97eec884b59381ca6ae66ba3bcbd4ee 672 Gene3D G3DSA:1.10.287.950 324 622 1.3E-59 T 14-10-2018 ABED_0163 b97eec884b59381ca6ae66ba3bcbd4ee 672 SMART SM00283 374 623 8.5E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0163 b97eec884b59381ca6ae66ba3bcbd4ee 672 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 159 5.9E-12 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABED_0163 b97eec884b59381ca6ae66ba3bcbd4ee 672 SUPERFAMILY SSF58104 248 616 6.02E-58 T 14-10-2018 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 SUPERFAMILY SSF50156 392 474 3.81E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 Pfam PF13365 Trypsin-like peptidase domain 103 239 2.8E-33 T 14-10-2018 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 SMART SM00228 278 358 3.3E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 SMART SM00228 387 467 4.5E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 Gene3D G3DSA:2.30.42.10 273 375 1.5E-23 T 14-10-2018 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 Gene3D G3DSA:2.30.42.10 385 475 6.0E-15 T 14-10-2018 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 PRINTS PR00834 HtrA/DegQ protease family signature 210 227 9.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 PRINTS PR00834 HtrA/DegQ protease family signature 316 328 9.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 9.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 PRINTS PR00834 HtrA/DegQ protease family signature 112 124 9.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 PRINTS PR00834 HtrA/DegQ protease family signature 175 199 9.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 PRINTS PR00834 HtrA/DegQ protease family signature 134 154 9.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 SUPERFAMILY SSF50156 259 366 4.6E-22 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 Pfam PF13180 PDZ domain 405 469 1.9E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 Pfam PF13180 PDZ domain 278 366 1.5E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 43 472 5.8E-137 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 Gene3D G3DSA:2.40.10.120 42 271 9.6E-76 T 14-10-2018 ABED_1905 33281bddfa0757b3504e7415f75330fc 475 SUPERFAMILY SSF50494 43 275 6.67E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Pfam PF14520 Helix-hairpin-helix domain 86 139 0.0034 T 14-10-2018 ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Gene3D G3DSA:1.10.150.20 72 141 3.2E-6 T 14-10-2018 ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 SUPERFAMILY SSF52540 185 476 9.37E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Gene3D G3DSA:2.30.30.940 594 685 1.1E-86 T 14-10-2018 ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 SUPERFAMILY SSF47781 90 204 6.3E-6 T 14-10-2018 IPR010994 RuvA domain 2-like ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 SUPERFAMILY SSF52540 427 745 9.74E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Gene3D G3DSA:3.40.50.300 476 746 1.1E-86 T 14-10-2018 ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Pfam PF13538 UvrD-like helicase C-terminal domain 685 732 1.2E-12 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Pfam PF13604 AAA domain 323 508 4.2E-35 T 14-10-2018 ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Gene3D G3DSA:1.10.10.2220 184 284 3.0E-11 T 14-10-2018 ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Pfam PF14490 Helix-hairpin-helix containing domain 143 231 1.7E-25 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain ABED_1290 aebf6ab8b16bb8fe9b77b1ae8747f020 775 Gene3D G3DSA:3.40.50.300 310 475 1.1E-86 T 14-10-2018 ABED_1574 249bdfc60f9afbbb2121055552bcb94b 157 Pfam PF00578 AhpC/TSA family 23 124 2.4E-7 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABED_1574 249bdfc60f9afbbb2121055552bcb94b 157 SUPERFAMILY SSF52833 12 121 1.39E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1574 249bdfc60f9afbbb2121055552bcb94b 157 Gene3D G3DSA:3.40.30.10 16 137 4.8E-12 T 14-10-2018 ABED_0108 782853ad3d3dd8107c6cf16f32f2503e 146 Pfam PF07681 DoxX 18 97 3.4E-20 T 14-10-2018 IPR032808 DoxX family ABED_0458 114cbfd668ac24c0abb551f63f2fa76c 310 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 309 48.517 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ABED_0458 114cbfd668ac24c0abb551f63f2fa76c 310 SMART SM01400 4 120 2.5E-81 T 14-10-2018 ABED_0458 114cbfd668ac24c0abb551f63f2fa76c 310 Gene3D G3DSA:3.40.50.2020 147 285 1.1E-125 T 14-10-2018 ABED_0458 114cbfd668ac24c0abb551f63f2fa76c 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 2.0E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABED_0458 114cbfd668ac24c0abb551f63f2fa76c 310 Pfam PF14572 Phosphoribosyl synthetase-associated domain 202 308 2.9E-29 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABED_0458 114cbfd668ac24c0abb551f63f2fa76c 310 Gene3D G3DSA:3.40.50.2020 7 297 1.1E-125 T 14-10-2018 ABED_0458 114cbfd668ac24c0abb551f63f2fa76c 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 309 2.9E-123 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABED_0458 114cbfd668ac24c0abb551f63f2fa76c 310 SUPERFAMILY SSF53271 69 301 3.21E-61 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like ABED_1046 8a277a04a6ac81b32d12b32c6f0f9d02 276 SUPERFAMILY SSF53807 18 267 5.49E-44 T 14-10-2018 ABED_1046 8a277a04a6ac81b32d12b32c6f0f9d02 276 Gene3D G3DSA:3.40.50.1980 15 132 4.3E-27 T 14-10-2018 ABED_1046 8a277a04a6ac81b32d12b32c6f0f9d02 276 Gene3D G3DSA:3.40.50.1980 133 270 3.8E-17 T 14-10-2018 ABED_1046 8a277a04a6ac81b32d12b32c6f0f9d02 276 Pfam PF01497 Periplasmic binding protein 20 247 1.3E-31 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain ABED_0872 dcf564ea3ffab7de68285c81746469be 197 Pfam PF01863 Protein of unknown function DUF45 82 195 4.2E-38 T 14-10-2018 IPR002725 Protein of unknown function DUF45 ABED_0872 dcf564ea3ffab7de68285c81746469be 197 Gene3D G3DSA:3.30.2010.10 104 196 1.1E-22 T 14-10-2018 ABED_0856 4f4b50d8c5bbc7f81fcc4e08fb8d0f8a 371 SUPERFAMILY SSF55073 211 365 1.18E-40 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0856 4f4b50d8c5bbc7f81fcc4e08fb8d0f8a 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 362 6.6E-39 T 14-10-2018 IPR000160 GGDEF domain ABED_0856 4f4b50d8c5bbc7f81fcc4e08fb8d0f8a 371 SMART SM00267 196 366 3.8E-45 T 14-10-2018 IPR000160 GGDEF domain ABED_0856 4f4b50d8c5bbc7f81fcc4e08fb8d0f8a 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 205 365 3.8E-45 T 14-10-2018 IPR000160 GGDEF domain ABED_0856 4f4b50d8c5bbc7f81fcc4e08fb8d0f8a 371 Gene3D G3DSA:3.30.70.270 201 368 5.3E-46 T 14-10-2018 ABED_2091 2df6ad88bc75ed58a6a9db066ec8acff 316 SUPERFAMILY SSF55073 4 140 2.2E-7 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1512 b369359d033da4551c6b341fa7b043d2 297 Gene3D G3DSA:3.40.50.300 7 288 1.3E-85 T 14-10-2018 ABED_1512 b369359d033da4551c6b341fa7b043d2 297 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 46 267 1.2E-87 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related ABED_1512 b369359d033da4551c6b341fa7b043d2 297 SUPERFAMILY SSF52540 71 256 4.02E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1512 b369359d033da4551c6b341fa7b043d2 297 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 47 267 3.3E-98 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 ABED_1512 b369359d033da4551c6b341fa7b043d2 297 PIRSF PIRSF028756 8 294 9.2E-95 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 Gene3D G3DSA:2.170.190.11 48 138 5.5E-96 T 14-10-2018 ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 SUPERFAMILY SSF63867 325 404 7.59E-7 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 SMART SM00852 177 317 1.7E-33 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 SUPERFAMILY SSF53218 174 320 1.44E-33 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 Gene3D G3DSA:3.40.980.10 172 326 5.5E-96 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 Gene3D G3DSA:2.40.340.10 327 397 5.5E-96 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 Gene3D G3DSA:3.90.105.10 25 171 5.5E-96 T 14-10-2018 ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 162 1.4E-29 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 Pfam PF00994 Probable molybdopterin binding domain 177 315 1.1E-21 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_0508 f85e126190f42cb2457a4c8bf8ccce23 406 SUPERFAMILY SSF63882 4 171 1.7E-40 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0207 fe1f809975d01150d6c21c3977fdff22 330 TIGRFAM TIGR00876 tal_mycobact: transaldolase 9 326 1.9E-85 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ABED_0207 fe1f809975d01150d6c21c3977fdff22 330 ProSitePatterns PS01054 Transaldolase signature 1. 36 44 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABED_0207 fe1f809975d01150d6c21c3977fdff22 330 PIRSF PIRSF036915 2 330 5.1E-69 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ABED_0207 fe1f809975d01150d6c21c3977fdff22 330 Gene3D G3DSA:3.20.20.70 4 329 4.9E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0207 fe1f809975d01150d6c21c3977fdff22 330 SUPERFAMILY SSF51569 8 329 8.48E-67 T 14-10-2018 ABED_0207 fe1f809975d01150d6c21c3977fdff22 330 Hamap MF_00493 Transaldolase [tal]. 1 330 83.745 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ABED_0207 fe1f809975d01150d6c21c3977fdff22 330 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 11 327 1.3E-81 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABED_2039 ffe1e248d5c19ae2a077424e99f7e6b3 207 SUPERFAMILY SSF81901 60 206 2.18E-17 T 14-10-2018 ABED_2039 ffe1e248d5c19ae2a077424e99f7e6b3 207 Gene3D G3DSA:1.25.40.10 26 207 6.3E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_2039 ffe1e248d5c19ae2a077424e99f7e6b3 207 SMART SM00671 96 130 76.0 T 14-10-2018 IPR006597 Sel1-like repeat ABED_2039 ffe1e248d5c19ae2a077424e99f7e6b3 207 SMART SM00671 163 198 12.0 T 14-10-2018 IPR006597 Sel1-like repeat ABED_2039 ffe1e248d5c19ae2a077424e99f7e6b3 207 SMART SM00671 131 162 30.0 T 14-10-2018 IPR006597 Sel1-like repeat ABED_2039 ffe1e248d5c19ae2a077424e99f7e6b3 207 SMART SM00671 64 95 320.0 T 14-10-2018 IPR006597 Sel1-like repeat ABED_1090 831957bde4e874c4ae05991a51957da4 921 Pfam PF05359 Domain of Unknown Function (DUF748) 615 760 1.0E-31 T 14-10-2018 IPR008023 Protein of unknown function DUF748 ABED_1090 831957bde4e874c4ae05991a51957da4 921 Pfam PF05359 Domain of Unknown Function (DUF748) 149 298 7.3E-10 T 14-10-2018 IPR008023 Protein of unknown function DUF748 ABED_0745 78da298e058535f48838a6ea010a8e0a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 6.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0745 78da298e058535f48838a6ea010a8e0a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 6.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0745 78da298e058535f48838a6ea010a8e0a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 6.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0745 78da298e058535f48838a6ea010a8e0a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 6.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0745 78da298e058535f48838a6ea010a8e0a 160 SUPERFAMILY SSF46785 23 157 7.21E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0745 78da298e058535f48838a6ea010a8e0a 160 SMART SM00347 42 145 5.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0745 78da298e058535f48838a6ea010a8e0a 160 Gene3D G3DSA:1.10.10.10 12 160 5.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0745 78da298e058535f48838a6ea010a8e0a 160 Pfam PF01047 MarR family 51 109 6.2E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_1518 95955c0245badfc5d9534524884d2ae1 218 SUPERFAMILY SSF55811 26 211 7.24E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABED_1518 95955c0245badfc5d9534524884d2ae1 218 Pfam PF00293 NUDIX domain 29 132 1.9E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 5.0E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 2.9E-43 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 2.9E-43 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 2.9E-43 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 2.9E-43 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 2.9E-43 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 2.9E-43 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 309 3.6E-139 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 309 44.053 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 SUPERFAMILY SSF52096 28 309 1.68E-86 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABED_1862 e9284e932955a9e0ba925308f557fbc3 311 Gene3D G3DSA:3.90.226.10 2 311 9.4E-104 T 14-10-2018 ABED_1277 55f1f3d53b6b85d3e9edac907d1ed7a0 430 Pfam PF05525 Branched-chain amino acid transport protein 9 426 6.4E-105 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 ABED_1277 55f1f3d53b6b85d3e9edac907d1ed7a0 430 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 15 412 4.1E-98 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 PIRSF PIRSF002133 1 124 1.3E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 Gene3D G3DSA:2.40.50.140 1 127 6.1E-63 T 14-10-2018 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.129 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.1E-40 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 5.5E-70 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1798 3372697f8c3aecd75ba1ed27f3a6ffa8 127 SUPERFAMILY SSF50249 2 123 9.42E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_1977 1985d8c5a5844a12cd7219ac483b9d5c 164 SUPERFAMILY SSF52540 5 164 1.95E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1977 1985d8c5a5844a12cd7219ac483b9d5c 164 Gene3D G3DSA:3.40.50.300 3 164 1.8E-31 T 14-10-2018 ABED_1977 1985d8c5a5844a12cd7219ac483b9d5c 164 PIRSF PIRSF006135 1 164 5.6E-32 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 ABED_1977 1985d8c5a5844a12cd7219ac483b9d5c 164 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 162 7.1E-32 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 ABED_0554 4ef07de1432b01cfe86f98f9af0a0ec6 82 Gene3D G3DSA:1.10.260.40 7 80 5.9E-12 T 14-10-2018 ABED_0554 4ef07de1432b01cfe86f98f9af0a0ec6 82 Pfam PF12844 Helix-turn-helix domain 15 77 6.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_0554 4ef07de1432b01cfe86f98f9af0a0ec6 82 SMART SM00530 16 74 5.8E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_0554 4ef07de1432b01cfe86f98f9af0a0ec6 82 SUPERFAMILY SSF47413 12 76 6.76E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABED_0550 ff0b48697776c0f87beaf9c6e873d31d 429 SUPERFAMILY SSF52540 64 367 1.73E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 SUPERFAMILY SSF48452 55 214 8.98E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 SUPERFAMILY SSF81901 56 404 1.54E-12 T 14-10-2018 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 Gene3D G3DSA:1.25.40.10 34 194 1.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 Gene3D G3DSA:1.25.40.10 355 428 9.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 Pfam PF13174 Tetratricopeptide repeat 86 109 0.011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 SMART SM00028 83 116 0.31 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 SMART SM00028 371 404 0.002 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 SMART SM00028 193 226 440.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 Pfam PF13181 Tetratricopeptide repeat 55 76 0.003 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_1764 4e7aded8c7ad80e8e72e7c14c731b1f3 683 Pfam PF13181 Tetratricopeptide repeat 373 403 3.4E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_0710 3bb7796c9dda11aba2306c12dd67eaf6 79 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 43 76 1.0E-9 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0710 3bb7796c9dda11aba2306c12dd67eaf6 79 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0710 3bb7796c9dda11aba2306c12dd67eaf6 79 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 77 2.4E-27 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0710 3bb7796c9dda11aba2306c12dd67eaf6 79 SUPERFAMILY SSF50104 4 76 4.68E-24 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABED_0710 3bb7796c9dda11aba2306c12dd67eaf6 79 SMART SM00739 6 33 3.0E-7 T 14-10-2018 IPR005824 KOW ABED_0710 3bb7796c9dda11aba2306c12dd67eaf6 79 Pfam PF00467 KOW motif 9 40 1.0E-7 T 14-10-2018 IPR005824 KOW ABED_0710 3bb7796c9dda11aba2306c12dd67eaf6 79 Gene3D G3DSA:2.30.30.1090 1 73 1.3E-27 T 14-10-2018 ABED_0710 3bb7796c9dda11aba2306c12dd67eaf6 79 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 79 14.847 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1721 07ff14581b6535bf623b786c5c17f756 145 Gene3D G3DSA:3.90.1170.40 1 145 7.8E-44 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABED_1721 07ff14581b6535bf623b786c5c17f756 145 SUPERFAMILY SSF54690 18 139 9.55E-30 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABED_1721 07ff14581b6535bf623b786c5c17f756 145 Pfam PF02391 MoaE protein 23 114 1.9E-11 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABED_1483 635d7a4870ad3d5b7d8b2c7081af915c 176 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 174 12.039 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1483 635d7a4870ad3d5b7d8b2c7081af915c 176 SUPERFAMILY SSF47928 4 102 1.57E-16 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1483 635d7a4870ad3d5b7d8b2c7081af915c 176 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 140 5.9E-22 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1483 635d7a4870ad3d5b7d8b2c7081af915c 176 Gene3D G3DSA:1.10.520.20 2 102 4.6E-11 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1483 635d7a4870ad3d5b7d8b2c7081af915c 176 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 140 2.8E-17 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1310 7dc87b3bde51204d210bac56a2922714 408 Gene3D G3DSA:3.40.50.300 14 211 1.2E-8 T 14-10-2018 ABED_1310 7dc87b3bde51204d210bac56a2922714 408 SUPERFAMILY SSF52540 18 265 8.51E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1310 7dc87b3bde51204d210bac56a2922714 408 Pfam PF07693 KAP family P-loop domain 20 91 2.7E-5 T 14-10-2018 IPR011646 KAP family P-loop domain ABED_0194 a7fd05bf03d29773d60bb435880870a5 634 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 293 4.4E-52 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ABED_0194 a7fd05bf03d29773d60bb435880870a5 634 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 578 631 4.1E-10 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABED_0194 a7fd05bf03d29773d60bb435880870a5 634 SUPERFAMILY SSF64518 164 631 8.5E-6 T 14-10-2018 ABED_0194 a7fd05bf03d29773d60bb435880870a5 634 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABED_0194 a7fd05bf03d29773d60bb435880870a5 634 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 3.9E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ABED_0194 a7fd05bf03d29773d60bb435880870a5 634 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 3.9E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ABED_0194 a7fd05bf03d29773d60bb435880870a5 634 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ABED_0804 b428bac76342ddea3188018326f6e0f6 811 Pfam PF12161 HsdM N-terminal domain 8 121 1.4E-19 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ABED_0804 b428bac76342ddea3188018326f6e0f6 811 SUPERFAMILY SSF53335 7 484 3.05E-119 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0804 b428bac76342ddea3188018326f6e0f6 811 Gene3D G3DSA:1.20.1260.30 1 71 2.8E-17 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily ABED_0804 b428bac76342ddea3188018326f6e0f6 811 Pfam PF02384 N-6 DNA Methylase 134 446 1.9E-100 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ABED_0804 b428bac76342ddea3188018326f6e0f6 811 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 321 6.2E-19 T 14-10-2018 ABED_0804 b428bac76342ddea3188018326f6e0f6 811 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 157 173 6.2E-19 T 14-10-2018 ABED_0804 b428bac76342ddea3188018326f6e0f6 811 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 260 272 6.2E-19 T 14-10-2018 ABED_0804 b428bac76342ddea3188018326f6e0f6 811 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 199 6.2E-19 T 14-10-2018 ABED_0804 b428bac76342ddea3188018326f6e0f6 811 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 70 450 2.4E-77 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 ABED_0804 b428bac76342ddea3188018326f6e0f6 811 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 263 269 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABED_0804 b428bac76342ddea3188018326f6e0f6 811 Gene3D G3DSA:3.40.50.150 134 430 3.3E-87 T 14-10-2018 ABED_0531 4fa8c8a7ffa7d2d29673d46ed1d94d3e 178 Pfam PF08534 Redoxin 20 162 1.5E-20 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ABED_0531 4fa8c8a7ffa7d2d29673d46ed1d94d3e 178 SUPERFAMILY SSF52833 1 163 8.87E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_0531 4fa8c8a7ffa7d2d29673d46ed1d94d3e 178 Gene3D G3DSA:3.40.30.10 2 168 5.1E-47 T 14-10-2018 ABED_0531 4fa8c8a7ffa7d2d29673d46ed1d94d3e 178 Hamap MF_00269 Thiol peroxidase [tpx]. 3 166 36.34 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 ABED_0531 4fa8c8a7ffa7d2d29673d46ed1d94d3e 178 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 ABED_0319 204f3c8062999107f3f9a1b87f802b17 351 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 79 350 8.6E-85 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABED_0319 204f3c8062999107f3f9a1b87f802b17 351 SUPERFAMILY SSF161111 78 274 1.31E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABED_0319 204f3c8062999107f3f9a1b87f802b17 351 Gene3D G3DSA:1.20.1510.10 79 273 5.5E-41 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABED_0319 204f3c8062999107f3f9a1b87f802b17 351 Pfam PF01545 Cation efflux family 85 273 1.8E-43 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABED_0319 204f3c8062999107f3f9a1b87f802b17 351 SUPERFAMILY SSF160240 276 350 1.96E-8 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABED_0748 ab34a48a36e06b373a733552e787f9a2 551 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 391 549 7.6E-48 T 14-10-2018 IPR000160 GGDEF domain ABED_0748 ab34a48a36e06b373a733552e787f9a2 551 Gene3D G3DSA:3.30.70.270 378 550 3.5E-51 T 14-10-2018 ABED_0748 ab34a48a36e06b373a733552e787f9a2 551 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 546 4.8E-42 T 14-10-2018 IPR000160 GGDEF domain ABED_0748 ab34a48a36e06b373a733552e787f9a2 551 SMART SM00267 382 550 2.2E-53 T 14-10-2018 IPR000160 GGDEF domain ABED_0748 ab34a48a36e06b373a733552e787f9a2 551 SUPERFAMILY SSF55073 398 548 2.2E-43 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1963 a0b55b8ea761d84b6e0bcc8566bb5ab7 105 Gene3D G3DSA:2.60.120.10 17 105 1.7E-31 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_1963 a0b55b8ea761d84b6e0bcc8566bb5ab7 105 SUPERFAMILY SSF51182 4 105 8.59E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_1268 b176779ef102c63b20417b4c0f4dccf8 205 SUPERFAMILY SSF103039 6 198 4.27E-37 T 14-10-2018 IPR028976 CheC-like superfamily ABED_1268 b176779ef102c63b20417b4c0f4dccf8 205 Gene3D G3DSA:3.40.1550.10 5 202 2.4E-35 T 14-10-2018 IPR028976 CheC-like superfamily ABED_1268 b176779ef102c63b20417b4c0f4dccf8 205 Pfam PF13690 Chemotaxis phosphatase CheX 69 145 3.7E-8 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain ABED_1624 1bf3da08df51f1af6e3d7d1dceddef02 288 Gene3D G3DSA:3.40.50.2000 56 280 9.2E-22 T 14-10-2018 ABED_1624 1bf3da08df51f1af6e3d7d1dceddef02 288 Pfam PF00534 Glycosyl transferases group 1 111 266 1.5E-9 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 ABED_1624 1bf3da08df51f1af6e3d7d1dceddef02 288 Gene3D G3DSA:3.40.50.2000 94 272 9.2E-22 T 14-10-2018 ABED_1624 1bf3da08df51f1af6e3d7d1dceddef02 288 SUPERFAMILY SSF53756 55 285 6.28E-21 T 14-10-2018 ABED_1634 5c7a94be71d19afb8e0daed30144dbd1 236 Pfam PF01522 Polysaccharide deacetylase 37 178 6.3E-20 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABED_1634 5c7a94be71d19afb8e0daed30144dbd1 236 Gene3D G3DSA:3.20.20.370 1 218 5.2E-43 T 14-10-2018 ABED_1634 5c7a94be71d19afb8e0daed30144dbd1 236 SUPERFAMILY SSF88713 16 182 1.14E-25 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABED_0788 2b63f6441bb03b2e8909a56cb8f07529 251 SUPERFAMILY SSF51735 2 246 5.01E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0788 2b63f6441bb03b2e8909a56cb8f07529 251 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 81 1.0E-4 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABED_0788 2b63f6441bb03b2e8909a56cb8f07529 251 Gene3D G3DSA:3.40.50.720 1 250 7.8E-32 T 14-10-2018 ABED_1604 62cb6bc522aed285e6666fb76cc0df1b 112 PIRSF PIRSF020408 1 104 4.4E-36 T 14-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 ABED_1604 62cb6bc522aed285e6666fb76cc0df1b 112 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 2 87 8.0E-18 T 14-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 ABED_0728 20b8f4e45a5f3b4c34a68cbf42693c3d 255 Gene3D G3DSA:3.40.980.10 9 170 3.2E-29 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABED_0728 20b8f4e45a5f3b4c34a68cbf42693c3d 255 SMART SM00852 9 172 2.1E-15 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_0728 20b8f4e45a5f3b4c34a68cbf42693c3d 255 SUPERFAMILY SSF53218 6 164 2.09E-20 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABED_0728 20b8f4e45a5f3b4c34a68cbf42693c3d 255 Pfam PF00994 Probable molybdopterin binding domain 11 165 3.6E-19 T 14-10-2018 IPR001453 MoaB/Mog domain ABED_1493 e97d63faff7387653ac671e12c09a759 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1493 e97d63faff7387653ac671e12c09a759 85 Pfam PF01016 Ribosomal L27 protein 2 81 3.1E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1493 e97d63faff7387653ac671e12c09a759 85 Gene3D G3DSA:2.40.50.100 21 85 4.7E-30 T 14-10-2018 ABED_1493 e97d63faff7387653ac671e12c09a759 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 6.0E-14 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1493 e97d63faff7387653ac671e12c09a759 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 2.1E-40 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1493 e97d63faff7387653ac671e12c09a759 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.837 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1493 e97d63faff7387653ac671e12c09a759 85 SUPERFAMILY SSF110324 2 82 5.93E-33 T 14-10-2018 ABED_1493 e97d63faff7387653ac671e12c09a759 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 8.0E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1493 e97d63faff7387653ac671e12c09a759 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 8.0E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1493 e97d63faff7387653ac671e12c09a759 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 8.0E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1962 8622ca4bd3fe818a8f03f805ffbaecf7 409 Gene3D G3DSA:1.10.8.260 270 334 1.9E-104 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily ABED_1962 8622ca4bd3fe818a8f03f805ffbaecf7 409 Gene3D G3DSA:2.40.30.10 189 351 1.9E-104 T 14-10-2018 ABED_1962 8622ca4bd3fe818a8f03f805ffbaecf7 409 SUPERFAMILY SSF160996 190 351 1.15E-34 T 14-10-2018 ABED_1962 8622ca4bd3fe818a8f03f805ffbaecf7 409 Gene3D G3DSA:3.50.50.60 5 400 1.9E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_1962 8622ca4bd3fe818a8f03f805ffbaecf7 409 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 3 404 2.2E-134 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ABED_1962 8622ca4bd3fe818a8f03f805ffbaecf7 409 Pfam PF03486 HI0933-like protein 2 404 1.1E-102 T 14-10-2018 ABED_1962 8622ca4bd3fe818a8f03f805ffbaecf7 409 SUPERFAMILY SSF51905 2 406 4.6E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 SUPERFAMILY SSF55681 117 411 6.63E-88 T 14-10-2018 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 412 37.162 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 PIRSF PIRSF001529 1 412 1.1E-164 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 412 8.8E-159 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 Gene3D G3DSA:3.30.930.10 106 412 4.5E-113 T 14-10-2018 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 219 395 2.1E-35 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 3.9E-21 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 Gene3D G3DSA:1.10.287.40 1 105 8.3E-15 T 14-10-2018 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 PRINTS PR00981 Seryl-tRNA synthetase signature 313 326 6.8E-27 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 PRINTS PR00981 Seryl-tRNA synthetase signature 348 364 6.8E-27 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 PRINTS PR00981 Seryl-tRNA synthetase signature 273 286 6.8E-27 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 PRINTS PR00981 Seryl-tRNA synthetase signature 330 346 6.8E-27 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 PRINTS PR00981 Seryl-tRNA synthetase signature 261 273 6.8E-27 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABED_0320 d3e6a82ccc47f76ac16e2fa7124a7d3d 412 SUPERFAMILY SSF46589 1 113 1.78E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABED_0302 0fe517704e824ba860d36188d02367a3 257 Pfam PF06738 Putative threonine/serine exporter 16 251 2.7E-61 T 14-10-2018 IPR010619 Putative threonine/serine exporter ABED_1994 2af8bf683bfbcfdeb539afa501848954 240 PIRSF PIRSF001430 1 240 7.5E-70 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1994 2af8bf683bfbcfdeb539afa501848954 240 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 240 30.126 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1994 2af8bf683bfbcfdeb539afa501848954 240 Gene3D G3DSA:3.30.70.580 1 104 1.4E-25 T 14-10-2018 ABED_1994 2af8bf683bfbcfdeb539afa501848954 240 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 235 1.2E-57 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1994 2af8bf683bfbcfdeb539afa501848954 240 Gene3D G3DSA:3.30.70.660 105 239 8.0E-27 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 ABED_1994 2af8bf683bfbcfdeb539afa501848954 240 Pfam PF01416 tRNA pseudouridine synthase 7 102 4.9E-6 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1994 2af8bf683bfbcfdeb539afa501848954 240 Pfam PF01416 tRNA pseudouridine synthase 140 240 5.5E-18 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1994 2af8bf683bfbcfdeb539afa501848954 240 SUPERFAMILY SSF55120 1 240 1.58E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_0217 e0ccb2c48ffa823880b5e26eb11efa25 258 SUPERFAMILY SSF102405 14 194 3.4E-23 T 14-10-2018 ABED_0217 e0ccb2c48ffa823880b5e26eb11efa25 258 Pfam PF02481 DNA recombination-mediator protein A 12 195 5.2E-55 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ABED_0217 e0ccb2c48ffa823880b5e26eb11efa25 258 Gene3D G3DSA:3.40.50.450 6 216 5.5E-58 T 14-10-2018 ABED_2058 75e02bc2b52ef8fe1a88767395a9d01d 287 Gene3D G3DSA:3.40.640.10 6 180 5.8E-12 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_2058 75e02bc2b52ef8fe1a88767395a9d01d 287 SUPERFAMILY SSF53383 14 283 4.95E-13 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0204 7bd4c0976b1b2e0817b7fa9ba7546691 126 Pfam PF03652 Holliday junction resolvase 4 124 3.4E-27 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABED_0204 7bd4c0976b1b2e0817b7fa9ba7546691 126 SUPERFAMILY SSF53098 4 125 9.1E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_0204 7bd4c0976b1b2e0817b7fa9ba7546691 126 Gene3D G3DSA:3.30.420.140 2 126 5.5E-25 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ABED_0204 7bd4c0976b1b2e0817b7fa9ba7546691 126 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 123 2.1E-19 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABED_0204 7bd4c0976b1b2e0817b7fa9ba7546691 126 SMART SM00732 1 94 8.1E-15 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ABED_0204 7bd4c0976b1b2e0817b7fa9ba7546691 126 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 126 15.943 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABED_0008 0f390258658997110d44dae8effdc4a6 268 Pfam PF13847 Methyltransferase domain 65 162 5.6E-9 T 14-10-2018 IPR025714 Methyltransferase domain ABED_0008 0f390258658997110d44dae8effdc4a6 268 Gene3D G3DSA:3.40.50.150 37 189 4.4E-21 T 14-10-2018 ABED_0008 0f390258658997110d44dae8effdc4a6 268 SUPERFAMILY SSF53335 4 250 3.85E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 Gene3D G3DSA:3.30.300.20 17 106 1.3E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.877 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 Gene3D G3DSA:3.30.1140.32 108 208 9.2E-43 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 SUPERFAMILY SSF54814 2 105 1.49E-33 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 4.7E-92 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 Pfam PF07650 KH domain 38 109 1.7E-16 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-40 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 SUPERFAMILY SSF54821 108 206 1.7E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0705 06ad952246fccf5cd7f3994edb4e5536 234 SMART SM00322 60 125 0.0039 T 14-10-2018 IPR004087 K Homology domain GO:0003676 ABED_1313 19b928075b4f400200426c4774217293 269 Gene3D G3DSA:3.40.50.300 66 269 1.3E-58 T 14-10-2018 ABED_1313 19b928075b4f400200426c4774217293 269 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 59 266 4.4E-83 T 14-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 ABED_1313 19b928075b4f400200426c4774217293 269 PIRSF PIRSF005624 49 269 7.4E-87 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 ABED_1313 19b928075b4f400200426c4774217293 269 SUPERFAMILY SSF52540 54 262 4.07E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1313 19b928075b4f400200426c4774217293 269 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 87 245 1.2E-26 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ABED_0760 1dbba6ef7687e47e5307c0aa0d3e65a0 331 Pfam PF06580 Histidine kinase 155 230 5.4E-21 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ABED_1995 bfb87faba490a7ad57ae7a372a06b151 339 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 325 2.1E-38 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 ABED_1348 56f755fc258e4288aed2462ce5dc50e4 196 Pfam PF05494 MlaC protein 35 194 4.8E-37 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ABED_1348 56f755fc258e4288aed2462ce5dc50e4 196 Gene3D G3DSA:3.10.450.710 26 196 7.1E-32 T 14-10-2018 ABED_0181 5d2d1804e790f0e7edb5dece3933509a 289 SUPERFAMILY SSF103190 16 131 6.91E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABED_1603 6d51f48fae5289fc56fe0f5e81a73798 165 Pfam PF01464 Transglycosylase SLT domain 45 150 8.0E-7 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 ABED_1603 6d51f48fae5289fc56fe0f5e81a73798 165 Gene3D G3DSA:1.10.530.10 33 164 1.1E-6 T 14-10-2018 ABED_1603 6d51f48fae5289fc56fe0f5e81a73798 165 SUPERFAMILY SSF53955 9 156 1.38E-10 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.3E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.3E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.3E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.917 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 72 7.0E-13 T 14-10-2018 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 Gene3D G3DSA:1.10.720.90 2 55 1.4E-22 T 14-10-2018 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 Gene3D G3DSA:1.10.1900.20 56 118 4.3E-27 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 SUPERFAMILY SSF74731 2 117 1.96E-45 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.9E-47 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0074 c7b5af07a9c9ce146ace2c5914816161 118 Pfam PF00453 Ribosomal protein L20 3 109 7.6E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1408 ed9a9b09ff8e44c07542d60753888c1a 197 PRINTS PR00354 7Fe ferredoxin signature 89 106 4.7E-5 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ABED_1408 ed9a9b09ff8e44c07542d60753888c1a 197 PRINTS PR00354 7Fe ferredoxin signature 72 82 4.7E-5 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ABED_1408 ed9a9b09ff8e44c07542d60753888c1a 197 PRINTS PR00354 7Fe ferredoxin signature 62 72 4.7E-5 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ABED_1408 ed9a9b09ff8e44c07542d60753888c1a 197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1408 ed9a9b09ff8e44c07542d60753888c1a 197 Gene3D G3DSA:3.30.70.20 68 125 9.3E-37 T 14-10-2018 ABED_1408 ed9a9b09ff8e44c07542d60753888c1a 197 Pfam PF13247 4Fe-4S dicluster domain 58 139 6.3E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1408 ed9a9b09ff8e44c07542d60753888c1a 197 Gene3D G3DSA:3.30.70.20 12 176 9.3E-37 T 14-10-2018 ABED_1408 ed9a9b09ff8e44c07542d60753888c1a 197 SUPERFAMILY SSF54862 9 175 3.03E-48 T 14-10-2018 ABED_1394 ed9a9b09ff8e44c07542d60753888c1a 197 PRINTS PR00354 7Fe ferredoxin signature 89 106 4.7E-5 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ABED_1394 ed9a9b09ff8e44c07542d60753888c1a 197 PRINTS PR00354 7Fe ferredoxin signature 72 82 4.7E-5 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ABED_1394 ed9a9b09ff8e44c07542d60753888c1a 197 PRINTS PR00354 7Fe ferredoxin signature 62 72 4.7E-5 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ABED_1394 ed9a9b09ff8e44c07542d60753888c1a 197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1394 ed9a9b09ff8e44c07542d60753888c1a 197 Gene3D G3DSA:3.30.70.20 68 125 9.3E-37 T 14-10-2018 ABED_1394 ed9a9b09ff8e44c07542d60753888c1a 197 Pfam PF13247 4Fe-4S dicluster domain 58 139 6.3E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1394 ed9a9b09ff8e44c07542d60753888c1a 197 Gene3D G3DSA:3.30.70.20 12 176 9.3E-37 T 14-10-2018 ABED_1394 ed9a9b09ff8e44c07542d60753888c1a 197 SUPERFAMILY SSF54862 9 175 3.03E-48 T 14-10-2018 ABED_1697 883042b929000db3797db334e0a150e5 72 Pfam PF00313 'Cold-shock' DNA-binding domain 7 71 1.5E-24 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABED_1697 883042b929000db3797db334e0a150e5 72 Gene3D G3DSA:2.40.50.140 3 72 1.0E-24 T 14-10-2018 ABED_1697 883042b929000db3797db334e0a150e5 72 SMART SM00357 6 72 6.4E-20 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 ABED_1697 883042b929000db3797db334e0a150e5 72 PIRSF PIRSF002599 1 72 1.4E-21 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABED_1697 883042b929000db3797db334e0a150e5 72 PRINTS PR00050 Cold shock protein signature 45 63 2.5E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABED_1697 883042b929000db3797db334e0a150e5 72 PRINTS PR00050 Cold shock protein signature 7 22 2.5E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABED_1697 883042b929000db3797db334e0a150e5 72 PRINTS PR00050 Cold shock protein signature 28 37 2.5E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABED_1697 883042b929000db3797db334e0a150e5 72 SUPERFAMILY SSF50249 5 71 5.71E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_2096 89f9d3142fddb45a243f7d43dcd9bd47 463 Pfam PF00589 Phage integrase family 196 378 4.8E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABED_2096 89f9d3142fddb45a243f7d43dcd9bd47 463 SUPERFAMILY SSF56349 193 421 2.74E-15 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABED_2096 89f9d3142fddb45a243f7d43dcd9bd47 463 Gene3D G3DSA:1.10.443.10 180 424 7.8E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABED_0461 4da4aef49326e028e004f5f1610aba1c 367 Gene3D G3DSA:2.30.30.280 211 283 2.6E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABED_0461 4da4aef49326e028e004f5f1610aba1c 367 Pfam PF03054 tRNA methyl transferase 5 363 1.7E-128 T 14-10-2018 ABED_0461 4da4aef49326e028e004f5f1610aba1c 367 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 364 38.128 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABED_0461 4da4aef49326e028e004f5f1610aba1c 367 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 363 3.8E-126 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABED_0461 4da4aef49326e028e004f5f1610aba1c 367 Gene3D G3DSA:2.40.30.10 285 367 4.3E-25 T 14-10-2018 ABED_0461 4da4aef49326e028e004f5f1610aba1c 367 SUPERFAMILY SSF52402 1 242 1.04E-54 T 14-10-2018 ABED_0461 4da4aef49326e028e004f5f1610aba1c 367 Gene3D G3DSA:3.40.50.620 1 209 1.8E-84 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_1131 9c2fb658d82c929a87c8871bb370523f 379 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 119 374 6.6E-87 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 ABED_1131 9c2fb658d82c929a87c8871bb370523f 379 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 153 166 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_1131 9c2fb658d82c929a87c8871bb370523f 379 SUPERFAMILY SSF51717 111 377 9.81E-84 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_1131 9c2fb658d82c929a87c8871bb370523f 379 PIRSF PIRSF000501 1 379 1.4E-148 T 14-10-2018 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 ABED_1131 9c2fb658d82c929a87c8871bb370523f 379 Gene3D G3DSA:3.20.20.20 99 378 2.1E-85 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_1131 9c2fb658d82c929a87c8871bb370523f 379 Pfam PF00809 Pterin binding enzyme 121 360 3.2E-68 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABED_1318 b14b466e38ec0305adbcea246039d353 368 Pfam PF05661 Protein of unknown function (DUF808) 125 326 5.6E-77 T 14-10-2018 IPR008526 Inner membrane protein YedI ABED_1318 b14b466e38ec0305adbcea246039d353 368 PIRSF PIRSF016660 25 368 5.3E-128 T 14-10-2018 IPR008526 Inner membrane protein YedI ABED_1860 5a20a201d9bc565960679102a4988e43 330 SUPERFAMILY SSF46589 6 89 1.62E-16 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABED_1860 5a20a201d9bc565960679102a4988e43 330 SUPERFAMILY SSF55681 84 330 7.11E-71 T 14-10-2018 ABED_1860 5a20a201d9bc565960679102a4988e43 330 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 329 44.658 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 ABED_1860 5a20a201d9bc565960679102a4988e43 330 Pfam PF01409 tRNA synthetases class II core domain (F) 84 329 1.7E-91 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 ABED_1860 5a20a201d9bc565960679102a4988e43 330 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 12 80 1.7E-16 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABED_1860 5a20a201d9bc565960679102a4988e43 330 Gene3D G3DSA:3.30.930.10 2 330 3.7E-105 T 14-10-2018 ABED_1581 7448f607061fbde7550db2c19aca2825 124 Gene3D G3DSA:1.10.10.10 4 73 1.5E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1581 7448f607061fbde7550db2c19aca2825 124 Pfam PF01475 Ferric uptake regulator family 8 94 4.9E-18 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABED_1581 7448f607061fbde7550db2c19aca2825 124 SUPERFAMILY SSF46785 7 114 1.28E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1890 9db3a0b7acf80909947bf6fbde4a7533 285 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 4.1E-46 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 ABED_1890 9db3a0b7acf80909947bf6fbde4a7533 285 Gene3D G3DSA:3.30.2350.10 3 234 2.8E-62 T 14-10-2018 ABED_1890 9db3a0b7acf80909947bf6fbde4a7533 285 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 281 13.331 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1890 9db3a0b7acf80909947bf6fbde4a7533 285 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 215 1.8E-52 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1890 9db3a0b7acf80909947bf6fbde4a7533 285 SUPERFAMILY SSF55120 11 220 1.69E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1733 a26a41e17f576df56e892d7d271b4a3e 376 Gene3D G3DSA:3.20.20.60 48 346 2.4E-36 T 14-10-2018 ABED_1733 a26a41e17f576df56e892d7d271b4a3e 376 SUPERFAMILY SSF51621 46 292 1.85E-29 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABED_1733 a26a41e17f576df56e892d7d271b4a3e 376 PIRSF PIRSF015582 46 353 5.4E-38 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like ABED_1733 a26a41e17f576df56e892d7d271b4a3e 376 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 54 220 4.2E-10 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ABED_0924 c04cfa58e9ba010cf275e1fed3e9b365 165 Gene3D G3DSA:3.40.50.1000 1 162 6.6E-52 T 14-10-2018 IPR023214 HAD superfamily ABED_0924 c04cfa58e9ba010cf275e1fed3e9b365 165 PIRSF PIRSF006118 1 165 2.3E-61 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABED_0924 c04cfa58e9ba010cf275e1fed3e9b365 165 Pfam PF08282 haloacid dehalogenase-like hydrolase 78 142 1.8E-12 T 14-10-2018 ABED_0924 c04cfa58e9ba010cf275e1fed3e9b365 165 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 154 4.0E-53 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABED_0924 c04cfa58e9ba010cf275e1fed3e9b365 165 SUPERFAMILY SSF56784 1 152 7.22E-39 T 14-10-2018 IPR036412 HAD-like superfamily ABED_1360 4f2694e1e24ce93413ee8f3d2d21b7d6 294 SUPERFAMILY SSF47240 16 132 2.64E-14 T 14-10-2018 IPR009078 Ferritin-like superfamily ABED_1360 4f2694e1e24ce93413ee8f3d2d21b7d6 294 Pfam PF02915 Rubrerythrin 9 120 7.2E-5 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 ABED_1360 4f2694e1e24ce93413ee8f3d2d21b7d6 294 Gene3D G3DSA:1.20.1260.10 5 136 1.5E-8 T 14-10-2018 IPR012347 Ferritin-like ABED_1752 71fdaa605a72a2ec5a696f26a14882e9 249 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.9E-12 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABED_1752 71fdaa605a72a2ec5a696f26a14882e9 249 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 2.9E-12 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABED_1752 71fdaa605a72a2ec5a696f26a14882e9 249 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.9E-12 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABED_1752 71fdaa605a72a2ec5a696f26a14882e9 249 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.9E-12 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABED_1752 71fdaa605a72a2ec5a696f26a14882e9 249 Pfam PF01311 Bacterial export proteins, family 1 14 244 1.6E-48 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABED_0054 a52af9f61265bf98692a69de607c960a 253 SUPERFAMILY SSF51366 5 252 1.26E-84 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABED_0054 a52af9f61265bf98692a69de607c960a 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 4 252 1.8E-114 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ABED_0054 a52af9f61265bf98692a69de607c960a 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 3 252 48.457 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ABED_0054 a52af9f61265bf98692a69de607c960a 253 Pfam PF00977 Histidine biosynthesis protein 7 235 3.5E-91 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ABED_0054 a52af9f61265bf98692a69de607c960a 253 Gene3D G3DSA:3.20.20.70 3 253 3.8E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0198 3f4eb0a1a86e514f9547758ad3ceecbb 326 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 261 18.624 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABED_0198 3f4eb0a1a86e514f9547758ad3ceecbb 326 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 13 188 6.1E-51 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABED_0198 3f4eb0a1a86e514f9547758ad3ceecbb 326 Pfam PF01171 PP-loop family 13 187 1.7E-50 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ABED_0198 3f4eb0a1a86e514f9547758ad3ceecbb 326 SUPERFAMILY SSF52402 10 201 9.48E-42 T 14-10-2018 ABED_0198 3f4eb0a1a86e514f9547758ad3ceecbb 326 Gene3D G3DSA:3.40.50.620 6 215 3.0E-44 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0448 459d8d66f49ac20cbc7feffb9e248d73 235 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 234 35.291 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ABED_0448 459d8d66f49ac20cbc7feffb9e248d73 235 SUPERFAMILY SSF51366 1 234 1.61E-67 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABED_0448 459d8d66f49ac20cbc7feffb9e248d73 235 Pfam PF00977 Histidine biosynthesis protein 3 226 7.1E-74 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ABED_0448 459d8d66f49ac20cbc7feffb9e248d73 235 Gene3D G3DSA:3.20.20.70 3 235 1.7E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0448 459d8d66f49ac20cbc7feffb9e248d73 235 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 231 3.1E-81 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ABED_0195 04ab493cba8f9f4e2fa29ccc5b948ce2 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 217 428 1.5E-28 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 ABED_0195 04ab493cba8f9f4e2fa29ccc5b948ce2 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 17 114 3.1E-10 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 ABED_1983 5254e506bfad06c2a1858e6dfff97234 309 Gene3D G3DSA:3.40.50.20 1 114 1.2E-31 T 14-10-2018 ABED_1983 5254e506bfad06c2a1858e6dfff97234 309 SUPERFAMILY SSF56059 99 289 3.7E-49 T 14-10-2018 ABED_1983 5254e506bfad06c2a1858e6dfff97234 309 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 3.4E-71 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 ABED_1983 5254e506bfad06c2a1858e6dfff97234 309 Pfam PF08443 RimK-like ATP-grasp domain 98 286 9.3E-64 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ABED_1983 5254e506bfad06c2a1858e6dfff97234 309 Gene3D G3DSA:3.30.470.80 182 298 2.9E-42 T 14-10-2018 ABED_1983 5254e506bfad06c2a1858e6dfff97234 309 Gene3D G3DSA:3.30.1490.20 115 181 1.0E-22 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 SUPERFAMILY SSF143034 2 62 1.44E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.075 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 Pfam PF01632 Ribosomal protein L35 2 58 4.6E-22 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 9.1E-13 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 9.1E-13 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 9.1E-13 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 Gene3D G3DSA:2.40.50.530 1 63 1.2E-15 T 14-10-2018 ABED_0073 920beb7f42c7d970cbfc01b9cf50ac64 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 6.4E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABED_2143 831195f6c18bfd5341b3dedeb3d0a9f0 125 Gene3D G3DSA:1.10.3830.10 3 120 5.3E-31 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ABED_2143 831195f6c18bfd5341b3dedeb3d0a9f0 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 14 115 5.4E-29 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ABED_2143 831195f6c18bfd5341b3dedeb3d0a9f0 125 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 68 79 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ABED_0607 930789e19e048ee53f2db9b009d006ae 261 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 259 4.8E-88 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ABED_0607 930789e19e048ee53f2db9b009d006ae 261 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 261 92.397 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ABED_0607 930789e19e048ee53f2db9b009d006ae 261 Gene3D G3DSA:3.20.20.70 1 260 6.9E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0607 930789e19e048ee53f2db9b009d006ae 261 SUPERFAMILY SSF63892 2 260 4.58E-83 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ABED_0607 930789e19e048ee53f2db9b009d006ae 261 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 258 2.5E-93 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ABED_0848 00ae08ab33b10324a55c7c4d5df0526c 260 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 29 257 4.8E-78 T 14-10-2018 IPR014127 Conserved hypothetical protein CHP02757 ABED_0848 00ae08ab33b10324a55c7c4d5df0526c 260 Pfam PF09674 Protein of unknown function (DUF2400) 31 256 2.7E-67 T 14-10-2018 IPR014127 Conserved hypothetical protein CHP02757 ABED_0848 00ae08ab33b10324a55c7c4d5df0526c 260 SUPERFAMILY SSF48150 194 256 3.45E-5 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 Pfam PF01514 Secretory protein of YscJ/FliF family 25 219 3.4E-49 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 PIRSF PIRSF004862 1 571 8.1E-177 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 PRINTS PR01009 Flagellar M-ring protein signature 265 283 2.5E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 PRINTS PR01009 Flagellar M-ring protein signature 195 213 2.5E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 PRINTS PR01009 Flagellar M-ring protein signature 340 364 2.5E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 PRINTS PR01009 Flagellar M-ring protein signature 152 166 2.5E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 PRINTS PR01009 Flagellar M-ring protein signature 120 138 2.5E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 Pfam PF08345 Flagellar M-ring protein C-terminal 252 410 2.0E-31 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 Gene3D G3DSA:3.30.300.30 119 222 2.4E-13 T 14-10-2018 ABED_1772 de8f7fff47e07cd72a73d47033f196d2 574 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 5 536 1.8E-74 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABED_0377 b2adb228f69639a6990893595a464b8a 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 568 578 1.3E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.3E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 1.3E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 1.3E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 535 557 1.3E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 1.3E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 PRINTS PR00985 Leucyl-tRNA synthetase signature 494 512 1.3E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 Gene3D G3DSA:2.30.210.10 583 594 3.3E-226 T 14-10-2018 ABED_0377 b2adb228f69639a6990893595a464b8a 821 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0377 b2adb228f69639a6990893595a464b8a 821 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 819 20.967 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 Gene3D G3DSA:1.10.730.10 604 752 4.8E-29 T 14-10-2018 ABED_0377 b2adb228f69639a6990893595a464b8a 821 Gene3D G3DSA:3.40.50.620 32 582 3.3E-226 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0377 b2adb228f69639a6990893595a464b8a 821 Pfam PF09334 tRNA synthetases class I (M) 34 180 2.4E-22 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0377 b2adb228f69639a6990893595a464b8a 821 SUPERFAMILY SSF47323 630 820 2.83E-12 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0377 b2adb228f69639a6990893595a464b8a 821 SUPERFAMILY SSF52374 7 634 4.33E-141 T 14-10-2018 ABED_0377 b2adb228f69639a6990893595a464b8a 821 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 410 4.0E-63 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 ABED_0377 b2adb228f69639a6990893595a464b8a 821 Gene3D G3DSA:3.90.740.10 227 422 3.3E-226 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABED_0377 b2adb228f69639a6990893595a464b8a 821 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 424 625 3.4E-23 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0377 b2adb228f69639a6990893595a464b8a 821 SUPERFAMILY SSF50677 225 422 6.8E-46 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABED_0377 b2adb228f69639a6990893595a464b8a 821 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 820 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABED_0377 b2adb228f69639a6990893595a464b8a 821 Gene3D G3DSA:3.10.20.590 760 821 2.1E-15 T 14-10-2018 ABED_1528 66810dcdd856755bb79109dac1b9ba41 453 Gene3D G3DSA:3.40.50.300 205 452 9.3E-87 T 14-10-2018 ABED_1528 66810dcdd856755bb79109dac1b9ba41 453 Gene3D G3DSA:3.30.450.90 76 203 3.0E-34 T 14-10-2018 ABED_1528 66810dcdd856755bb79109dac1b9ba41 453 SUPERFAMILY SSF52540 82 450 4.53E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1528 66810dcdd856755bb79109dac1b9ba41 453 SMART SM00382 231 352 8.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1528 66810dcdd856755bb79109dac1b9ba41 453 Pfam PF00437 Type II/IV secretion system protein 113 368 3.3E-70 T 14-10-2018 IPR001482 Type II/IV secretion system protein ABED_0929 15c78a7fd7e6e27028f22c6b424c6a2d 158 Gene3D G3DSA:1.10.10.10 74 157 3.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0929 15c78a7fd7e6e27028f22c6b424c6a2d 158 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 154 2.7E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABED_0929 15c78a7fd7e6e27028f22c6b424c6a2d 158 SUPERFAMILY SSF88946 1 79 5.49E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABED_0929 15c78a7fd7e6e27028f22c6b424c6a2d 158 Pfam PF04542 Sigma-70 region 2 2 66 2.8E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABED_0929 15c78a7fd7e6e27028f22c6b424c6a2d 158 Pfam PF08281 Sigma-70, region 4 99 149 1.7E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABED_0929 15c78a7fd7e6e27028f22c6b424c6a2d 158 SUPERFAMILY SSF88659 100 156 2.43E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABED_0929 15c78a7fd7e6e27028f22c6b424c6a2d 158 Gene3D G3DSA:1.10.1740.10 1 68 7.9E-11 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 SUPERFAMILY SSF56770 72 333 1.13E-88 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 Gene3D G3DSA:3.40.50.700 69 249 1.8E-64 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 250 332 2.3E-33 T 14-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 84 230 1.4E-27 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 25 381 5.0E-163 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 Gene3D G3DSA:4.10.480.10 252 369 4.7E-45 T 14-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PIRSF PIRSF000310 27 387 2.9E-142 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 69 91 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 92 116 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 237 254 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 234 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 138 161 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 255 273 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 183 207 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 279 305 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 307 320 4.1E-84 T 14-10-2018 ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 38 61 2.6E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABED_1332 f3d397afd090b2728297e0f9faa8b75a 392 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 38 64 4.1E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABED_1818 84da50914c7a45b5170d902b1fcd133a 524 Pfam PF03929 PepSY-associated TM region 14 373 2.4E-29 T 14-10-2018 IPR005625 PepSY-associated TM protein ABED_2117 db0be8096d342673bccdc87c215a09f8 253 Pfam PF00005 ABC transporter 32 173 2.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_2117 db0be8096d342673bccdc87c215a09f8 253 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_2117 db0be8096d342673bccdc87c215a09f8 253 SMART SM00382 40 223 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_2117 db0be8096d342673bccdc87c215a09f8 253 SUPERFAMILY SSF52540 11 227 9.25E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_2117 db0be8096d342673bccdc87c215a09f8 253 Gene3D G3DSA:3.40.50.300 2 251 2.7E-56 T 14-10-2018 ABED_1320 63e08eb26b201042a45b3599687d7ea4 234 Pfam PF04338 Protein of unknown function, DUF481 28 234 1.6E-55 T 14-10-2018 IPR007433 Protein of unknown function DUF481 ABED_1073 4a937431ec6d8711cff8f1f996f029fd 490 SUPERFAMILY SSF52540 109 346 2.0E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1073 4a937431ec6d8711cff8f1f996f029fd 490 ProSitePatterns PS00674 AAA-protein family signature. 249 267 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ABED_1073 4a937431ec6d8711cff8f1f996f029fd 490 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 149 278 8.4E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_1073 4a937431ec6d8711cff8f1f996f029fd 490 SUPERFAMILY SSF140990 358 490 1.96E-9 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ABED_1073 4a937431ec6d8711cff8f1f996f029fd 490 SMART SM00382 145 281 1.4E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1073 4a937431ec6d8711cff8f1f996f029fd 490 Gene3D G3DSA:1.10.8.60 280 402 7.5E-13 T 14-10-2018 ABED_1073 4a937431ec6d8711cff8f1f996f029fd 490 Gene3D G3DSA:3.40.50.300 98 279 2.0E-64 T 14-10-2018 ABED_0768 a164a75a69246135a0acf7e752922158 458 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 Gene3D G3DSA:3.40.120.10 1 150 4.0E-43 T 14-10-2018 ABED_0768 a164a75a69246135a0acf7e752922158 458 SUPERFAMILY SSF53738 3 180 2.32E-34 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 SUPERFAMILY SSF53738 266 350 6.67E-19 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 252 2.6E-21 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 SUPERFAMILY SSF53738 156 258 2.32E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 SUPERFAMILY SSF55957 363 455 1.41E-21 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 Gene3D G3DSA:3.30.310.50 365 457 6.5E-26 T 14-10-2018 ABED_0768 a164a75a69246135a0acf7e752922158 458 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 362 9.0E-15 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 Gene3D G3DSA:3.40.120.10 175 252 1.0E-25 T 14-10-2018 ABED_0768 a164a75a69246135a0acf7e752922158 458 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 369 442 2.4E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 9.1E-24 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 9.1E-24 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 9.1E-24 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 9.1E-24 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 121 1.6E-30 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABED_0768 a164a75a69246135a0acf7e752922158 458 Gene3D G3DSA:3.40.120.10 257 364 1.0E-22 T 14-10-2018 ABED_1821 4d351b3c3f08d9a52321758bb06b5e11 363 SUPERFAMILY SSF53187 15 355 2.89E-15 T 14-10-2018 ABED_1821 4d351b3c3f08d9a52321758bb06b5e11 363 Pfam PF05343 M42 glutamyl aminopeptidase 160 284 1.4E-6 T 14-10-2018 IPR008007 Peptidase M42 ABED_0286 5eba1d1afe7f3443b06d64241ba3c97c 495 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 487 7.4E-136 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0286 5eba1d1afe7f3443b06d64241ba3c97c 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 131 150 3.9E-31 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0286 5eba1d1afe7f3443b06d64241ba3c97c 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 161 185 3.9E-31 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0286 5eba1d1afe7f3443b06d64241ba3c97c 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 3.9E-31 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0286 5eba1d1afe7f3443b06d64241ba3c97c 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 325 344 3.9E-31 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0286 5eba1d1afe7f3443b06d64241ba3c97c 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 3.9E-31 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0286 5eba1d1afe7f3443b06d64241ba3c97c 495 Pfam PF00361 Proton-conducting membrane transporter 125 418 1.3E-57 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_1668 3038b539a804a91c2e1dad053f66c0dd 232 SUPERFAMILY SSF53335 6 158 9.98E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1668 3038b539a804a91c2e1dad053f66c0dd 232 Gene3D G3DSA:3.40.50.150 55 232 1.8E-53 T 14-10-2018 ABED_1668 3038b539a804a91c2e1dad053f66c0dd 232 Pfam PF01728 FtsJ-like methyltransferase 52 198 2.1E-20 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ABED_1668 3038b539a804a91c2e1dad053f66c0dd 232 Gene3D G3DSA:3.10.290.10 1 52 1.6E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABED_1668 3038b539a804a91c2e1dad053f66c0dd 232 Pfam PF01479 S4 domain 10 38 1.6E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1668 3038b539a804a91c2e1dad053f66c0dd 232 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 4 225 5.4E-57 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 ABED_2110 e941762d46f06e2e48417ea82b0a7fa2 284 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 273 4.0E-101 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ABED_2110 e941762d46f06e2e48417ea82b0a7fa2 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 278 5.6E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_2110 e941762d46f06e2e48417ea82b0a7fa2 284 SUPERFAMILY SSF161098 21 273 3.18E-57 T 14-10-2018 IPR035906 MetI-like superfamily ABED_2110 e941762d46f06e2e48417ea82b0a7fa2 284 Gene3D G3DSA:1.10.3720.10 20 279 3.0E-69 T 14-10-2018 IPR035906 MetI-like superfamily ABED_2110 e941762d46f06e2e48417ea82b0a7fa2 284 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 277 1.5E-124 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 ABED_1487 87073af0c1d1d1120c9798c9de52f9f4 258 SUPERFAMILY SSF52540 1 257 3.87E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1487 87073af0c1d1d1120c9798c9de52f9f4 258 PRINTS PR00091 Nitrogenase component II signature 9 22 3.8E-5 T 14-10-2018 ABED_1487 87073af0c1d1d1120c9798c9de52f9f4 258 PRINTS PR00091 Nitrogenase component II signature 31 46 3.8E-5 T 14-10-2018 ABED_1487 87073af0c1d1d1120c9798c9de52f9f4 258 Pfam PF13614 AAA domain 3 179 2.6E-66 T 14-10-2018 IPR025669 AAA domain ABED_1487 87073af0c1d1d1120c9798c9de52f9f4 258 Gene3D G3DSA:3.40.50.300 1 258 5.2E-77 T 14-10-2018 ABED_1212 4fd2f5d493dbe13877435c8485649501 272 PIRSF PIRSF012318 1 272 3.0E-65 T 14-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 ABED_1212 4fd2f5d493dbe13877435c8485649501 272 SUPERFAMILY SSF47240 79 215 8.4E-10 T 14-10-2018 IPR009078 Ferritin-like superfamily ABED_1212 4fd2f5d493dbe13877435c8485649501 272 Pfam PF04305 Protein of unknown function (DUF455) 13 262 8.9E-75 T 14-10-2018 IPR007402 Protein of unknown function DUF455 ABED_0470 129f43a8cdb6fef5fb3403bccca19290 312 SUPERFAMILY SSF161111 7 220 4.45E-27 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABED_0470 129f43a8cdb6fef5fb3403bccca19290 312 Pfam PF01545 Cation efflux family 12 222 4.4E-44 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABED_0470 129f43a8cdb6fef5fb3403bccca19290 312 Gene3D G3DSA:1.20.1510.10 9 222 2.1E-15 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABED_0507 ea127df7f17fabd7092536b58c9b8eb8 299 SUPERFAMILY SSF103481 210 286 9.42E-7 T 14-10-2018 ABED_0507 ea127df7f17fabd7092536b58c9b8eb8 299 Pfam PF00892 EamA-like transporter family 6 135 8.9E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_0507 ea127df7f17fabd7092536b58c9b8eb8 299 Pfam PF00892 EamA-like transporter family 155 286 2.7E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_1192 57a15b17443f1833db124396f07637ca 292 Pfam PF03008 Archaea bacterial proteins of unknown function 149 238 1.2E-8 T 14-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal ABED_1403 4cd2cb78d81ee4aebebb0beef7d19ab7 417 Pfam PF01566 Natural resistance-associated macrophage protein 30 377 3.5E-8 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABED_1606 990b3868550a2457027e51c38c70a806 165 SUPERFAMILY SSF52218 1 160 1.12E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_1606 990b3868550a2457027e51c38c70a806 165 Gene3D G3DSA:3.40.50.360 2 165 1.1E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_1606 990b3868550a2457027e51c38c70a806 165 TIGRFAM TIGR01752 flav_long: flavodoxin 3 164 7.4E-62 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 ABED_1606 990b3868550a2457027e51c38c70a806 165 PRINTS PR00369 Flavodoxin signature 48 59 4.1E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABED_1606 990b3868550a2457027e51c38c70a806 165 PRINTS PR00369 Flavodoxin signature 4 17 4.1E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABED_1606 990b3868550a2457027e51c38c70a806 165 PRINTS PR00369 Flavodoxin signature 77 87 4.1E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABED_1606 990b3868550a2457027e51c38c70a806 165 Pfam PF00258 Flavodoxin 5 156 2.2E-26 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ABED_1606 990b3868550a2457027e51c38c70a806 165 PIRSF PIRSF038996 1 165 6.8E-60 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 ABED_0208 e36c673cedc730a7ca8aa1a0e0a66da9 450 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 448 7.3E-205 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ABED_0208 e36c673cedc730a7ca8aa1a0e0a66da9 450 Gene3D G3DSA:3.20.20.70 199 447 2.5E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0208 e36c673cedc730a7ca8aa1a0e0a66da9 450 Gene3D G3DSA:3.20.20.70 37 198 3.1E-44 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0208 e36c673cedc730a7ca8aa1a0e0a66da9 450 SUPERFAMILY SSF51569 2 446 1.54E-194 T 14-10-2018 ABED_0208 e36c673cedc730a7ca8aa1a0e0a66da9 450 Pfam PF01474 Class-II DAHP synthetase family 4 442 3.1E-201 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ABED_0455 db94557562b83e3ee82ade0c1f27597e 88 Pfam PF02583 Metal-sensitive transcriptional repressor 4 84 7.5E-27 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ABED_0455 db94557562b83e3ee82ade0c1f27597e 88 Gene3D G3DSA:1.20.58.1000 1 86 3.2E-28 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily ABED_1271 ac940ab25bc04b8e37f8395261961a22 126 ProSitePatterns PS00552 MerR-type HTH domain signature. 14 36 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABED_1271 ac940ab25bc04b8e37f8395261961a22 126 Pfam PF13411 MerR HTH family regulatory protein 11 78 3.7E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABED_1271 ac940ab25bc04b8e37f8395261961a22 126 SMART SM00422 11 80 2.9E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABED_1271 ac940ab25bc04b8e37f8395261961a22 126 SUPERFAMILY SSF46955 11 102 4.3E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily ABED_1271 ac940ab25bc04b8e37f8395261961a22 126 Gene3D G3DSA:1.10.1660.10 7 102 7.0E-24 T 14-10-2018 ABED_1792 7fcfc6194fb1d1fe3d408d79310e4b69 429 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ABED_1792 7fcfc6194fb1d1fe3d408d79310e4b69 429 Pfam PF01136 Peptidase family U32 79 310 4.4E-82 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 SUPERFAMILY SSF81336 72 217 9.68E-37 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 23 219 7.7E-41 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 Hamap MF_01393 ATP synthase subunit a [atpB]. 16 224 15.286 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 Pfam PF00119 ATP synthase A chain 26 217 2.2E-52 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 Gene3D G3DSA:1.20.120.220 71 226 2.7E-39 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 PRINTS PR00123 ATP synthase A subunit signature 160 182 1.5E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 PRINTS PR00123 ATP synthase A subunit signature 80 96 1.5E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 PRINTS PR00123 ATP synthase A subunit signature 140 155 1.5E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1837 2bb69459ac7d87df6f3b687f7b00850f 228 PRINTS PR00123 ATP synthase A subunit signature 204 219 1.5E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1814 59bbde6cbe4f56f0084daf25a0e46c13 310 SUPERFAMILY SSF50331 245 304 5.38E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABED_1814 59bbde6cbe4f56f0084daf25a0e46c13 310 SUPERFAMILY SSF52540 4 238 1.16E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1814 59bbde6cbe4f56f0084daf25a0e46c13 310 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_1814 59bbde6cbe4f56f0084daf25a0e46c13 310 Gene3D G3DSA:3.40.50.300 1 260 6.9E-66 T 14-10-2018 ABED_1814 59bbde6cbe4f56f0084daf25a0e46c13 310 Pfam PF00005 ABC transporter 23 161 4.9E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_1814 59bbde6cbe4f56f0084daf25a0e46c13 310 SMART SM00382 31 211 2.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1814 59bbde6cbe4f56f0084daf25a0e46c13 310 Pfam PF08402 TOBE domain 246 304 1.7E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ABED_1463 fd9a1e186c59a0f5f5d4317af6548be5 144 Pfam PF13673 Acetyltransferase (GNAT) domain 47 128 6.4E-16 T 14-10-2018 IPR000182 GNAT domain ABED_1463 fd9a1e186c59a0f5f5d4317af6548be5 144 SUPERFAMILY SSF55729 1 138 1.5E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_1463 fd9a1e186c59a0f5f5d4317af6548be5 144 Gene3D G3DSA:3.40.630.30 1 143 3.9E-29 T 14-10-2018 ABED_0641 35ee983f966889cff798ae8fa525ea3f 301 Gene3D G3DSA:3.40.50.720 3 289 4.5E-42 T 14-10-2018 ABED_0641 35ee983f966889cff798ae8fa525ea3f 301 SUPERFAMILY SSF51735 5 289 5.96E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_0641 35ee983f966889cff798ae8fa525ea3f 301 Pfam PF04321 RmlD substrate binding domain 5 287 7.8E-25 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 ABED_1625 f13fe94f633b8e5fddd9391648e0b0f2 122 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 1 98 2.3E-29 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 ABED_1625 f13fe94f633b8e5fddd9391648e0b0f2 122 Pfam PF13242 HAD-hyrolase-like 52 92 7.4E-6 T 14-10-2018 ABED_1625 f13fe94f633b8e5fddd9391648e0b0f2 122 Gene3D G3DSA:3.40.50.1000 1 122 6.8E-34 T 14-10-2018 IPR023214 HAD superfamily ABED_1625 f13fe94f633b8e5fddd9391648e0b0f2 122 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 1 87 2.0E-19 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 ABED_1625 f13fe94f633b8e5fddd9391648e0b0f2 122 SUPERFAMILY SSF56784 1 117 2.46E-24 T 14-10-2018 IPR036412 HAD-like superfamily ABED_1496 2523e510258a20add9d387f36d71a59d 349 SUPERFAMILY SSF48452 70 164 5.31E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1496 2523e510258a20add9d387f36d71a59d 349 Gene3D G3DSA:1.25.40.10 73 180 1.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1402 19a8e02e0a6c5fae9b344218e7e4bab0 219 Pfam PF00072 Response regulator receiver domain 14 123 9.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1402 19a8e02e0a6c5fae9b344218e7e4bab0 219 Pfam PF05732 Firmicute plasmid replication protein (RepL) 141 215 9.9E-7 T 14-10-2018 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 ABED_1402 19a8e02e0a6c5fae9b344218e7e4bab0 219 Gene3D G3DSA:3.40.50.2300 4 146 3.8E-23 T 14-10-2018 ABED_1402 19a8e02e0a6c5fae9b344218e7e4bab0 219 SUPERFAMILY SSF52172 10 135 2.42E-26 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1402 19a8e02e0a6c5fae9b344218e7e4bab0 219 SMART SM00448 12 123 9.7E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 SUPERFAMILY SSF55347 149 312 1.7E-65 T 14-10-2018 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 Gene3D G3DSA:3.30.360.10 148 313 1.9E-133 T 14-10-2018 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 227 244 1.6E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 170 186 1.6E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.6E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 1.6E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 143 161 1.6E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 SUPERFAMILY SSF51735 3 165 1.2E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 4.0E-121 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 154 311 1.4E-61 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 Gene3D G3DSA:3.40.50.720 4 324 1.9E-133 T 14-10-2018 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 8.5E-28 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 SMART SM00846 3 149 1.4E-68 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 147 154 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_1927 d3695ac7eac0cdb60f15291fee69d3a8 331 PIRSF PIRSF000149 1 331 1.1E-122 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABED_0110 855c7ed4f53ee45391ccbb66f372ea15 306 SUPERFAMILY SSF56752 4 302 1.83E-91 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ABED_0110 855c7ed4f53ee45391ccbb66f372ea15 306 Pfam PF01063 Amino-transferase class IV 33 266 3.0E-46 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ABED_0110 855c7ed4f53ee45391ccbb66f372ea15 306 Gene3D G3DSA:3.30.470.10 1 128 6.1E-34 T 14-10-2018 ABED_0110 855c7ed4f53ee45391ccbb66f372ea15 306 Gene3D G3DSA:3.20.10.10 129 294 1.0E-49 T 14-10-2018 ABED_0110 855c7ed4f53ee45391ccbb66f372ea15 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 8 305 1.7E-120 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 ABED_0953 66aa30d82be3dc96b574d97018f8fbb6 104 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 2.3E-39 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 ABED_0953 66aa30d82be3dc96b574d97018f8fbb6 104 Gene3D G3DSA:2.60.120.10 1 103 3.3E-42 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0953 66aa30d82be3dc96b574d97018f8fbb6 104 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 103 28.033 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 ABED_0953 66aa30d82be3dc96b574d97018f8fbb6 104 SUPERFAMILY SSF51182 10 103 3.01E-36 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_0021 b5af645406d285e515c2d29a78ed5958 339 Gene3D G3DSA:1.10.620.20 4 312 1.4E-91 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 ABED_0021 b5af645406d285e515c2d29a78ed5958 339 PIRSF PIRSF000355 1 339 5.1E-115 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_0021 b5af645406d285e515c2d29a78ed5958 339 SUPERFAMILY SSF47240 15 336 1.75E-90 T 14-10-2018 IPR009078 Ferritin-like superfamily ABED_0021 b5af645406d285e515c2d29a78ed5958 339 Pfam PF00268 Ribonucleotide reductase, small chain 29 304 8.6E-73 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABED_1158 5cb116d7fae48965bb1223c7057793a2 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 214 1.3E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1158 5cb116d7fae48965bb1223c7057793a2 220 SMART SM00862 146 215 6.0E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1158 5cb116d7fae48965bb1223c7057793a2 220 SMART SM00448 4 114 1.6E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1158 5cb116d7fae48965bb1223c7057793a2 220 Pfam PF00072 Response regulator receiver domain 6 114 1.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1158 5cb116d7fae48965bb1223c7057793a2 220 SUPERFAMILY SSF52172 1 167 1.11E-36 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1158 5cb116d7fae48965bb1223c7057793a2 220 Gene3D G3DSA:3.40.50.2300 3 128 4.3E-35 T 14-10-2018 ABED_1158 5cb116d7fae48965bb1223c7057793a2 220 Gene3D G3DSA:1.10.10.10 129 218 6.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1367 632af0f50a7167c6f392ee48d2d7c90f 159 Gene3D G3DSA:3.30.420.10 1 158 6.5E-20 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_1367 632af0f50a7167c6f392ee48d2d7c90f 159 Pfam PF00075 RNase H 2 133 3.0E-11 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ABED_1367 632af0f50a7167c6f392ee48d2d7c90f 159 SUPERFAMILY SSF53098 1 155 2.02E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_0819 5d3658195ce36d70b86f47a94bf1526f 130 Gene3D G3DSA:3.30.450.20 2 109 1.5E-21 T 14-10-2018 ABED_0819 5d3658195ce36d70b86f47a94bf1526f 130 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 107 2.0E-10 T 14-10-2018 IPR000014 PAS domain ABED_0819 5d3658195ce36d70b86f47a94bf1526f 130 Pfam PF08447 PAS fold 23 105 1.3E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_0819 5d3658195ce36d70b86f47a94bf1526f 130 SUPERFAMILY SSF55785 13 105 2.44E-24 T 14-10-2018 IPR035965 PAS domain superfamily ABED_1813 5a7c60383bfb59cb2794641770930ec1 522 SUPERFAMILY SSF161098 10 250 8.24E-30 T 14-10-2018 IPR035906 MetI-like superfamily ABED_1813 5a7c60383bfb59cb2794641770930ec1 522 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 353 514 8.2E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_1813 5a7c60383bfb59cb2794641770930ec1 522 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 3.2E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_1813 5a7c60383bfb59cb2794641770930ec1 522 SUPERFAMILY SSF161098 275 514 1.44E-27 T 14-10-2018 IPR035906 MetI-like superfamily ABED_1813 5a7c60383bfb59cb2794641770930ec1 522 Gene3D G3DSA:1.10.3720.10 7 260 4.4E-33 T 14-10-2018 IPR035906 MetI-like superfamily ABED_1813 5a7c60383bfb59cb2794641770930ec1 522 Gene3D G3DSA:1.10.3720.10 276 522 3.7E-22 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0106 69f0e608a058bb9009a231799d8e74a6 269 SUPERFAMILY SSF56601 1 266 6.76E-59 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABED_0106 69f0e608a058bb9009a231799d8e74a6 269 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 253 1.9E-48 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ABED_0106 69f0e608a058bb9009a231799d8e74a6 269 Gene3D G3DSA:3.40.710.10 17 269 1.3E-78 T 14-10-2018 ABED_0106 69f0e608a058bb9009a231799d8e74a6 269 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 148 2.3E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABED_0106 69f0e608a058bb9009a231799d8e74a6 269 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 2.3E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABED_0106 69f0e608a058bb9009a231799d8e74a6 269 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 2.3E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABED_1040 9e0cfc824176474fbfd87fc822d3dfa8 228 SUPERFAMILY SSF55174 6 94 2.06E-7 T 14-10-2018 ABED_1040 9e0cfc824176474fbfd87fc822d3dfa8 228 SUPERFAMILY SSF55120 64 225 8.48E-36 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1040 9e0cfc824176474fbfd87fc822d3dfa8 228 Gene3D G3DSA:3.30.70.580 65 226 2.0E-47 T 14-10-2018 ABED_1040 9e0cfc824176474fbfd87fc822d3dfa8 228 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABED_1040 9e0cfc824176474fbfd87fc822d3dfa8 228 Pfam PF00849 RNA pseudouridylate synthase 64 197 7.2E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABED_1040 9e0cfc824176474fbfd87fc822d3dfa8 228 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 225 1.1E-39 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABED_1040 9e0cfc824176474fbfd87fc822d3dfa8 228 Gene3D G3DSA:3.30.70.1560 132 214 2.0E-47 T 14-10-2018 ABED_1259 5178f0b4536e162a919894af2388578c 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 83 1.6E-10 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ABED_1259 5178f0b4536e162a919894af2388578c 94 Gene3D G3DSA:3.30.2310.20 1 94 1.2E-27 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ABED_1259 5178f0b4536e162a919894af2388578c 94 SUPERFAMILY SSF143011 1 82 6.93E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ABED_1259 5178f0b4536e162a919894af2388578c 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 84 3.6E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ABED_0578 22f4e8d83c91e6ad7d0d3830310db367 627 SUPERFAMILY SSF58104 343 613 1.28E-52 T 14-10-2018 ABED_0578 22f4e8d83c91e6ad7d0d3830310db367 627 Gene3D G3DSA:1.10.287.950 315 614 6.8E-59 T 14-10-2018 ABED_0578 22f4e8d83c91e6ad7d0d3830310db367 627 SMART SM00283 366 618 3.4E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0578 22f4e8d83c91e6ad7d0d3830310db367 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 582 3.4E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0981 4b132a5fcd0c38486879381c398a0abd 364 SUPERFAMILY SSF51445 34 361 2.74E-66 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily ABED_0981 4b132a5fcd0c38486879381c398a0abd 364 Gene3D G3DSA:3.20.20.300 33 363 8.9E-90 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ABED_0981 4b132a5fcd0c38486879381c398a0abd 364 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 29 357 1.4E-61 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ABED_1904 4b8009422c71e5ab66bb9c1f5444a40c 220 SUPERFAMILY SSF52172 2 124 9.53E-32 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1904 4b8009422c71e5ab66bb9c1f5444a40c 220 Gene3D G3DSA:1.10.10.10 115 219 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1904 4b8009422c71e5ab66bb9c1f5444a40c 220 SUPERFAMILY SSF46894 132 219 1.25E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_1904 4b8009422c71e5ab66bb9c1f5444a40c 220 Gene3D G3DSA:3.40.50.2300 1 114 4.9E-27 T 14-10-2018 ABED_1904 4b8009422c71e5ab66bb9c1f5444a40c 220 SMART SM00862 143 219 2.8E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1904 4b8009422c71e5ab66bb9c1f5444a40c 220 Pfam PF00072 Response regulator receiver domain 2 109 7.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1904 4b8009422c71e5ab66bb9c1f5444a40c 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 1.7E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1904 4b8009422c71e5ab66bb9c1f5444a40c 220 SMART SM00448 1 108 8.8E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0493 c4ba076e6e722b5af27d9df3a734a107 221 SUPERFAMILY SSF52172 1 171 1.66E-20 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0493 c4ba076e6e722b5af27d9df3a734a107 221 Gene3D G3DSA:3.40.50.2300 1 127 4.7E-20 T 14-10-2018 ABED_0493 c4ba076e6e722b5af27d9df3a734a107 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 219 1.1E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0493 c4ba076e6e722b5af27d9df3a734a107 221 SMART SM00862 150 219 2.8E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0493 c4ba076e6e722b5af27d9df3a734a107 221 SMART SM00448 1 113 8.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0493 c4ba076e6e722b5af27d9df3a734a107 221 SUPERFAMILY SSF46894 146 220 6.29E-8 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_0493 c4ba076e6e722b5af27d9df3a734a107 221 Pfam PF00072 Response regulator receiver domain 3 110 2.7E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0493 c4ba076e6e722b5af27d9df3a734a107 221 Gene3D G3DSA:1.10.10.10 131 221 8.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 Gene3D G3DSA:2.160.20.10 25 387 2.7E-63 T 14-10-2018 IPR012334 Pectin lyase fold ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 SMART SM00912 23 135 4.7E-36 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 SUPERFAMILY SSF51126 22 304 9.73E-38 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 57 131 1.0E-23 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 Pfam PF07581 The GLUG motif 503 526 1.0E-4 T 14-10-2018 IPR011493 GLUG ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 Pfam PF07581 The GLUG motif 560 583 0.0019 T 14-10-2018 IPR011493 GLUG ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 Pfam PF07581 The GLUG motif 584 607 4.3E-4 T 14-10-2018 IPR011493 GLUG ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 Pfam PF07581 The GLUG motif 534 556 0.0019 T 14-10-2018 IPR011493 GLUG ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 Pfam PF05860 haemagglutination activity domain 26 134 7.5E-22 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal ABED_0984 e13c438d24318e12ad1bac2e99973dc3 792 Gene3D G3DSA:2.160.20.110 423 674 1.5E-41 T 14-10-2018 ABED_0703 497446218d463059cb19688529853db3 91 PIRSF PIRSF002144 1 91 9.5E-33 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0703 497446218d463059cb19688529853db3 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.1E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0703 497446218d463059cb19688529853db3 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.1E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0703 497446218d463059cb19688529853db3 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.1E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0703 497446218d463059cb19688529853db3 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.695 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0703 497446218d463059cb19688529853db3 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 88 3.2E-44 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABED_0703 497446218d463059cb19688529853db3 91 Gene3D G3DSA:3.30.860.10 1 91 4.9E-38 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0703 497446218d463059cb19688529853db3 91 SUPERFAMILY SSF54570 3 84 4.84E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0703 497446218d463059cb19688529853db3 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0703 497446218d463059cb19688529853db3 91 Pfam PF00203 Ribosomal protein S19 3 83 1.6E-34 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1137 0a176f153d8b52ed1077ddb093f9cfc6 90 Pfam PF02325 YGGT family 16 85 2.0E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 ABED_0831 e29e8038293939991141054ef618b2f9 522 SUPERFAMILY SSF56219 16 335 5.1E-33 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABED_0831 e29e8038293939991141054ef618b2f9 522 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 55 196 1.4E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ABED_0603 92b6314672b9e0704582e32a712f5b82 72 SUPERFAMILY SSF63562 8 68 1.92E-13 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABED_0603 92b6314672b9e0704582e32a712f5b82 72 Gene3D G3DSA:3.90.940.10 3 72 1.4E-12 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABED_0603 92b6314672b9e0704582e32a712f5b82 72 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 8 64 2.3E-8 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_0603 92b6314672b9e0704582e32a712f5b82 72 SMART SM01409 10 65 4.8E-10 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABED_0603 92b6314672b9e0704582e32a712f5b82 72 Pfam PF01192 RNA polymerase Rpb6 18 65 3.4E-8 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABED_0603 92b6314672b9e0704582e32a712f5b82 72 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 4 66 11.113 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABED_1667 4c162c170e5f09dace9ca434751f5ce5 190 Pfam PF09186 Domain of unknown function (DUF1949) 135 180 4.3E-9 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal ABED_1667 4c162c170e5f09dace9ca434751f5ce5 190 Gene3D G3DSA:3.30.70.240 126 184 2.9E-5 T 14-10-2018 ABED_1667 4c162c170e5f09dace9ca434751f5ce5 190 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 7 178 3.9E-52 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal ABED_1667 4c162c170e5f09dace9ca434751f5ce5 190 Gene3D G3DSA:3.30.230.30 1 125 5.7E-41 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily ABED_1667 4c162c170e5f09dace9ca434751f5ce5 190 SUPERFAMILY SSF54980 134 183 5.75E-8 T 14-10-2018 IPR035647 EF-G domain III/V-like ABED_1667 4c162c170e5f09dace9ca434751f5ce5 190 SUPERFAMILY SSF54211 4 125 1.82E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1667 4c162c170e5f09dace9ca434751f5ce5 190 Pfam PF01205 Uncharacterized protein family UPF0029 15 119 6.4E-27 T 14-10-2018 IPR001498 Impact, N-terminal ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 SUPERFAMILY SSF102114 2 271 4.05E-72 T 14-10-2018 ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 323 2.1E-109 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 304 1.5E-29 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 Gene3D G3DSA:3.20.20.70 1 323 2.4E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 2 323 37.317 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 Pfam PF04055 Radical SAM superfamily 15 175 2.8E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 Pfam PF13353 4Fe-4S single cluster domain 18 122 3.5E-9 T 14-10-2018 ABED_0344 f0cb0634082d350109b08f9e9e08d25a 323 SMART SM00729 11 212 2.4E-12 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_1214 024fe1b584bf5e711ea25208071293c4 300 Gene3D G3DSA:3.30.70.270 119 296 2.3E-38 T 14-10-2018 ABED_1214 024fe1b584bf5e711ea25208071293c4 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 125 284 9.0E-32 T 14-10-2018 IPR000160 GGDEF domain ABED_1214 024fe1b584bf5e711ea25208071293c4 300 SMART SM00267 113 289 1.1E-27 T 14-10-2018 IPR000160 GGDEF domain ABED_1214 024fe1b584bf5e711ea25208071293c4 300 SUPERFAMILY SSF55073 129 291 1.41E-35 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_1214 024fe1b584bf5e711ea25208071293c4 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 121 289 1.7E-35 T 14-10-2018 IPR000160 GGDEF domain ABED_0657 4bc0192304ef897196d2587e08f36bc8 420 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 315 6.3E-22 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_0657 4bc0192304ef897196d2587e08f36bc8 420 Gene3D G3DSA:2.40.30.170 66 322 9.6E-63 T 14-10-2018 ABED_0657 4bc0192304ef897196d2587e08f36bc8 420 Gene3D G3DSA:2.40.50.100 77 243 9.6E-63 T 14-10-2018 ABED_0657 4bc0192304ef897196d2587e08f36bc8 420 Gene3D G3DSA:2.40.420.20 61 411 9.6E-63 T 14-10-2018 ABED_0657 4bc0192304ef897196d2587e08f36bc8 420 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 340 1.1E-38 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABED_0657 4bc0192304ef897196d2587e08f36bc8 420 Gene3D G3DSA:1.10.287.470 111 205 9.6E-63 T 14-10-2018 ABED_0657 4bc0192304ef897196d2587e08f36bc8 420 SUPERFAMILY SSF111369 67 319 1.83E-18 T 14-10-2018 ABED_0597 91b41a804f230a6947be3fa812382a67 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 350 2.7E-35 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 ABED_1283 3115ba6b35354d6b5a46a4fc1c95c868 65 Pfam PF02609 Exonuclease VII small subunit 10 56 7.7E-11 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ABED_1283 3115ba6b35354d6b5a46a4fc1c95c868 65 SUPERFAMILY SSF116842 2 57 1.83E-11 T 14-10-2018 ABED_1283 3115ba6b35354d6b5a46a4fc1c95c868 65 Gene3D G3DSA:1.10.287.1040 4 65 4.2E-7 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 ABED_1283 3115ba6b35354d6b5a46a4fc1c95c868 65 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 57 7.6E-11 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ABED_0138 def9c9a69a26d05b82b9bea5a20bc708 156 Pfam PF00583 Acetyltransferase (GNAT) family 29 135 5.3E-12 T 14-10-2018 IPR000182 GNAT domain ABED_0138 def9c9a69a26d05b82b9bea5a20bc708 156 SUPERFAMILY SSF55729 4 147 1.46E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0138 def9c9a69a26d05b82b9bea5a20bc708 156 Gene3D G3DSA:3.40.630.30 3 154 1.4E-27 T 14-10-2018 ABED_1541 c47e9f204c09979121d05407bedd91dc 570 Pfam PF13175 AAA ATPase domain 225 321 2.7E-15 T 14-10-2018 ABED_1541 c47e9f204c09979121d05407bedd91dc 570 Pfam PF13175 AAA ATPase domain 1 203 1.1E-14 T 14-10-2018 ABED_1541 c47e9f204c09979121d05407bedd91dc 570 Gene3D G3DSA:3.40.50.300 1 343 1.5E-25 T 14-10-2018 ABED_1541 c47e9f204c09979121d05407bedd91dc 570 SUPERFAMILY SSF52540 1 339 1.81E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1383 c20f5cd815860ded38061385c63fee1d 157 Pfam PF11026 Protein of unknown function (DUF2721) 21 149 3.1E-31 T 14-10-2018 IPR021279 Protein of unknown function DUF2721 ABED_0799 23193e2d542f40787b628251667211b3 241 Gene3D G3DSA:3.30.390.80 3 147 6.3E-39 T 14-10-2018 ABED_0799 23193e2d542f40787b628251667211b3 241 Pfam PF04098 Rad52/22 family double-strand break repair protein 8 150 2.0E-28 T 14-10-2018 IPR007232 DNA repair protein Rad52/59/22 GO:0006281|GO:0006310 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938 ABED_0799 23193e2d542f40787b628251667211b3 241 SUPERFAMILY SSF54768 10 175 5.02E-25 T 14-10-2018 ABED_2120 16310822f615b0506ba3ffdbb031c403 316 Gene3D G3DSA:1.10.8.450 238 270 4.6E-110 T 14-10-2018 ABED_2120 16310822f615b0506ba3ffdbb031c403 316 SUPERFAMILY SSF53850 26 252 4.67E-50 T 14-10-2018 ABED_2120 16310822f615b0506ba3ffdbb031c403 316 SMART SM00062 27 243 8.5E-15 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABED_2120 16310822f615b0506ba3ffdbb031c403 316 Pfam PF09084 NMT1/THI5 like 55 246 2.2E-14 T 14-10-2018 IPR015168 SsuA/THI5-like ABED_2120 16310822f615b0506ba3ffdbb031c403 316 Gene3D G3DSA:3.40.190.10 28 300 4.6E-110 T 14-10-2018 ABED_2120 16310822f615b0506ba3ffdbb031c403 316 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 28 309 4.9E-73 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 ABED_2120 16310822f615b0506ba3ffdbb031c403 316 Gene3D G3DSA:3.40.190.10 107 206 4.6E-110 T 14-10-2018 ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 2 432 15.964 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 418 2.8E-105 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 PRINTS PR01806 Virulence factor MviN signature 51 67 1.6E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 PRINTS PR01806 Virulence factor MviN signature 148 169 1.6E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 PRINTS PR01806 Virulence factor MviN signature 350 369 1.6E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 PRINTS PR01806 Virulence factor MviN signature 402 419 1.6E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 PRINTS PR01806 Virulence factor MviN signature 32 51 1.6E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 PRINTS PR01806 Virulence factor MviN signature 252 278 1.6E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 PRINTS PR01806 Virulence factor MviN signature 124 148 1.6E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_0830 2f6e9a6643e6dc8a8a6b854177101f79 433 Pfam PF03023 MviN-like protein 28 426 1.0E-101 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABED_2014 2eee1f4018dc6ca3f2f5432b5f4af5d9 628 Pfam PF09299 Mu transposase, C-terminal 448 519 5.9E-13 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal ABED_2014 2eee1f4018dc6ca3f2f5432b5f4af5d9 628 Pfam PF00665 Integrase core domain 225 361 6.9E-18 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABED_2014 2eee1f4018dc6ca3f2f5432b5f4af5d9 628 SUPERFAMILY SSF53098 221 419 4.1E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_2014 2eee1f4018dc6ca3f2f5432b5f4af5d9 628 Gene3D G3DSA:3.30.420.10 222 430 3.9E-31 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_0744 8b29fce89f19c315c76b8784412554d0 411 Gene3D G3DSA:1.20.1600.10 12 409 1.4E-50 T 14-10-2018 ABED_0744 8b29fce89f19c315c76b8784412554d0 411 SUPERFAMILY SSF56954 5 406 2.75E-54 T 14-10-2018 ABED_0744 8b29fce89f19c315c76b8784412554d0 411 Pfam PF02321 Outer membrane efflux protein 224 400 2.1E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0744 8b29fce89f19c315c76b8784412554d0 411 Pfam PF02321 Outer membrane efflux protein 19 201 3.5E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0782 617dd6485885655db74106da15d9bd2c 197 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 196 31.67 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ABED_0782 617dd6485885655db74106da15d9bd2c 197 Gene3D G3DSA:3.20.20.70 1 196 3.7E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0782 617dd6485885655db74106da15d9bd2c 197 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 191 3.5E-36 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ABED_0782 617dd6485885655db74106da15d9bd2c 197 SUPERFAMILY SSF51366 1 194 4.24E-47 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABED_0560 8b3f35a751249ce28c46857a0f631ab4 183 Gene3D G3DSA:2.40.128.110 30 183 8.6E-8 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0560 8b3f35a751249ce28c46857a0f631ab4 183 SUPERFAMILY SSF101874 41 155 3.66E-6 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0560 8b3f35a751249ce28c46857a0f631ab4 183 Pfam PF04264 YceI-like domain 37 180 1.3E-10 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_1647 4bf29eb762a20c46542650a93a1941ab 281 SUPERFAMILY SSF53448 4 251 6.09E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1647 4bf29eb762a20c46542650a93a1941ab 281 Pfam PF00535 Glycosyl transferase family 2 8 147 2.3E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABED_1647 4bf29eb762a20c46542650a93a1941ab 281 Gene3D G3DSA:3.90.550.10 1 252 3.6E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1930 19675e466d7880822b442df0438106b8 273 PIRSF PIRSF000094 1 259 4.1E-113 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABED_1930 19675e466d7880822b442df0438106b8 273 Gene3D G3DSA:1.10.8.400 202 258 3.0E-20 T 14-10-2018 ABED_1930 19675e466d7880822b442df0438106b8 273 Gene3D G3DSA:3.40.50.720 7 200 3.6E-41 T 14-10-2018 ABED_1930 19675e466d7880822b442df0438106b8 273 SUPERFAMILY SSF51735 4 255 4.48E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1930 19675e466d7880822b442df0438106b8 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 1.5E-85 T 14-10-2018 ABED_1930 19675e466d7880822b442df0438106b8 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1930 19675e466d7880822b442df0438106b8 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1930 19675e466d7880822b442df0438106b8 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1930 19675e466d7880822b442df0438106b8 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABED_1560 a497ba8417819b23fa4bb0ab5603ff21 400 SUPERFAMILY SSF51735 3 173 1.05E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_1560 a497ba8417819b23fa4bb0ab5603ff21 400 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 137 6.6E-29 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ABED_1560 a497ba8417819b23fa4bb0ab5603ff21 400 Gene3D G3DSA:3.40.50.720 7 392 4.5E-152 T 14-10-2018 ABED_1560 a497ba8417819b23fa4bb0ab5603ff21 400 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 143 390 8.3E-33 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 ABED_1560 a497ba8417819b23fa4bb0ab5603ff21 400 Gene3D G3DSA:3.30.360.10 153 349 4.5E-152 T 14-10-2018 ABED_1519 590bffc0f5081aaf8488cfb0ceef4dd4 422 Pfam PF00202 Aminotransferase class-III 25 416 5.0E-114 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_1519 590bffc0f5081aaf8488cfb0ceef4dd4 422 Gene3D G3DSA:3.90.1150.10 9 409 2.5E-147 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1519 590bffc0f5081aaf8488cfb0ceef4dd4 422 SUPERFAMILY SSF53383 2 418 2.21E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1519 590bffc0f5081aaf8488cfb0ceef4dd4 422 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_1519 590bffc0f5081aaf8488cfb0ceef4dd4 422 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 12 416 1.2E-157 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ABED_1519 590bffc0f5081aaf8488cfb0ceef4dd4 422 Gene3D G3DSA:3.40.640.10 59 325 2.5E-147 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0259 98e01e6295d0e3352e0411c40df43688 295 Pfam PF13714 Phosphoenolpyruvate phosphomutase 8 252 2.0E-49 T 14-10-2018 ABED_0259 98e01e6295d0e3352e0411c40df43688 295 Gene3D G3DSA:3.20.20.60 1 295 2.9E-103 T 14-10-2018 ABED_0259 98e01e6295d0e3352e0411c40df43688 295 ProSitePatterns PS00161 Isocitrate lyase signature. 118 123 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 ABED_0259 98e01e6295d0e3352e0411c40df43688 295 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 2 291 48.009 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ABED_0259 98e01e6295d0e3352e0411c40df43688 295 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 5 290 6.5E-130 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ABED_0259 98e01e6295d0e3352e0411c40df43688 295 SUPERFAMILY SSF51621 3 288 7.18E-102 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABED_0668 1aadc55259bbf781e5e4c2548559e0c8 155 SUPERFAMILY SSF46785 16 146 1.05E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0668 1aadc55259bbf781e5e4c2548559e0c8 155 Pfam PF01475 Ferric uptake regulator family 23 142 5.1E-31 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABED_0668 1aadc55259bbf781e5e4c2548559e0c8 155 Gene3D G3DSA:1.10.10.10 6 95 5.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0668 1aadc55259bbf781e5e4c2548559e0c8 155 Gene3D G3DSA:3.30.1490.190 98 153 7.0E-22 T 14-10-2018 ABED_1061 335db1421f3529a13bc3d210cc7aa936 294 Pfam PF00271 Helicase conserved C-terminal domain 98 205 5.1E-27 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1061 335db1421f3529a13bc3d210cc7aa936 294 SMART SM00490 124 205 8.1E-28 T 14-10-2018 IPR001650 Helicase, C-terminal ABED_1061 335db1421f3529a13bc3d210cc7aa936 294 SUPERFAMILY SSF52540 4 227 5.05E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1061 335db1421f3529a13bc3d210cc7aa936 294 Pfam PF00270 DEAD/DEAH box helicase 2 62 1.8E-13 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABED_1061 335db1421f3529a13bc3d210cc7aa936 294 Gene3D G3DSA:3.40.50.300 83 294 1.0E-47 T 14-10-2018 ABED_1061 335db1421f3529a13bc3d210cc7aa936 294 Gene3D G3DSA:3.40.50.300 1 82 6.4E-25 T 14-10-2018 ABED_1275 62b61a69d8ce860317d5c12fdfd07d6c 363 Gene3D G3DSA:3.40.1710.10 40 162 1.6E-6 T 14-10-2018 ABED_1275 62b61a69d8ce860317d5c12fdfd07d6c 363 Pfam PF12698 ABC-2 family transporter protein 20 352 2.1E-44 T 14-10-2018 ABED_0626 df9c517936ac5755aee251bffc3f48a4 204 PIRSF PIRSF000495 1 203 1.2E-67 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABED_0626 df9c517936ac5755aee251bffc3f48a4 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 200 3.7E-63 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABED_0626 df9c517936ac5755aee251bffc3f48a4 204 Gene3D G3DSA:3.40.50.880 1 203 6.9E-69 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0626 df9c517936ac5755aee251bffc3f48a4 204 Pfam PF00117 Glutamine amidotransferase class-I 4 190 9.8E-19 T 14-10-2018 IPR017926 Glutamine amidotransferase ABED_0626 df9c517936ac5755aee251bffc3f48a4 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 200 32.755 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABED_0626 df9c517936ac5755aee251bffc3f48a4 204 SUPERFAMILY SSF52317 2 191 2.36E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0962 23a522aaad8b9b7aba28d22e2b7bf942 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 8.6E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0962 23a522aaad8b9b7aba28d22e2b7bf942 37 Pfam PF00444 Ribosomal protein L36 1 37 5.1E-18 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0962 23a522aaad8b9b7aba28d22e2b7bf942 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 2.0E-7 T 14-10-2018 ABED_0962 23a522aaad8b9b7aba28d22e2b7bf942 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.073 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0962 23a522aaad8b9b7aba28d22e2b7bf942 37 SUPERFAMILY SSF57840 1 37 2.22E-15 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0962 23a522aaad8b9b7aba28d22e2b7bf942 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1479 996b3fe7c6def6a4a62f59263ebea025 125 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 123 16.973 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1479 996b3fe7c6def6a4a62f59263ebea025 125 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 122 9.5E-33 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1479 996b3fe7c6def6a4a62f59263ebea025 125 Gene3D G3DSA:2.60.15.10 1 124 2.2E-28 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1479 996b3fe7c6def6a4a62f59263ebea025 125 SUPERFAMILY SSF51344 3 83 1.31E-20 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1479 996b3fe7c6def6a4a62f59263ebea025 125 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 1.3E-23 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_1479 996b3fe7c6def6a4a62f59263ebea025 125 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 83 9.0E-22 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABED_0882 3017d23bf8e112efdad6ea260258e7e5 304 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 22 299 2.9E-90 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 ABED_0882 3017d23bf8e112efdad6ea260258e7e5 304 SUPERFAMILY SSF53335 4 275 4.72E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_0882 3017d23bf8e112efdad6ea260258e7e5 304 Gene3D G3DSA:3.40.50.150 68 302 1.3E-39 T 14-10-2018 ABED_0513 35feabe182299884c450b12bcfd5a2b3 165 Pfam PF12118 SprA-related family 28 150 1.9E-18 T 14-10-2018 IPR021973 SprA-related family ABED_1067 6c445efb116adc5fdad5aff613553cf5 197 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABED_1067 6c445efb116adc5fdad5aff613553cf5 197 Gene3D G3DSA:3.40.50.12740 56 197 2.9E-19 T 14-10-2018 ABED_1067 6c445efb116adc5fdad5aff613553cf5 197 SMART SM00421 139 196 2.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABED_1067 6c445efb116adc5fdad5aff613553cf5 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 3.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABED_1067 6c445efb116adc5fdad5aff613553cf5 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 3.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABED_1067 6c445efb116adc5fdad5aff613553cf5 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 3.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABED_1067 6c445efb116adc5fdad5aff613553cf5 197 SUPERFAMILY SSF46894 137 195 2.65E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_1067 6c445efb116adc5fdad5aff613553cf5 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 194 2.1E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 SUPERFAMILY SSF56931 92 335 1.06E-75 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 Gene3D G3DSA:2.40.230.10 87 336 1.4E-75 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 124 141 2.4E-22 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 146 162 2.4E-22 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 280 297 2.4E-22 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 167 186 2.4E-22 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 244 262 2.4E-22 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 209 227 2.4E-22 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_0784 7401c9cb1eb6f963a34708a36234d1fd 336 Pfam PF02253 Phospholipase A1 95 334 3.5E-81 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ABED_1126 86d9ebc0b44a79deafcb442119f2ddce 325 SMART SM00729 2 187 8.7E-27 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABED_1126 86d9ebc0b44a79deafcb442119f2ddce 325 Gene3D G3DSA:3.80.30.20 1 254 3.4E-69 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABED_1126 86d9ebc0b44a79deafcb442119f2ddce 325 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 323 4.1E-83 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 ABED_1126 86d9ebc0b44a79deafcb442119f2ddce 325 SUPERFAMILY SSF102114 10 306 3.01E-72 T 14-10-2018 ABED_1126 86d9ebc0b44a79deafcb442119f2ddce 325 Pfam PF04055 Radical SAM superfamily 11 142 2.5E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_0047 b384b817e55d9db9a6753263294c9ad8 466 Gene3D G3DSA:3.40.50.300 228 465 2.1E-45 T 14-10-2018 ABED_0047 b384b817e55d9db9a6753263294c9ad8 466 SUPERFAMILY SSF52540 154 433 5.45E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0047 b384b817e55d9db9a6753263294c9ad8 466 Pfam PF13638 PIN domain 6 152 8.3E-14 T 14-10-2018 IPR002716 PIN domain ABED_0047 b384b817e55d9db9a6753263294c9ad8 466 Gene3D G3DSA:3.40.50.1010 2 155 4.5E-10 T 14-10-2018 ABED_0047 b384b817e55d9db9a6753263294c9ad8 466 Pfam PF02562 PhoH-like protein 231 464 3.7E-61 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 ABED_0155 248f7114eabcab9f99730b322608bdd8 333 Pfam PF00814 Glycoprotease family 27 306 4.2E-78 T 14-10-2018 IPR000905 Gcp-like domain ABED_0155 248f7114eabcab9f99730b322608bdd8 333 SUPERFAMILY SSF53067 97 311 5.7E-33 T 14-10-2018 ABED_0155 248f7114eabcab9f99730b322608bdd8 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 93 112 1.4E-39 T 14-10-2018 IPR017861 Kae1/TsaD family ABED_0155 248f7114eabcab9f99730b322608bdd8 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.4E-39 T 14-10-2018 IPR017861 Kae1/TsaD family ABED_0155 248f7114eabcab9f99730b322608bdd8 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 3 16 1.4E-39 T 14-10-2018 IPR017861 Kae1/TsaD family ABED_0155 248f7114eabcab9f99730b322608bdd8 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 72 92 1.4E-39 T 14-10-2018 IPR017861 Kae1/TsaD family ABED_0155 248f7114eabcab9f99730b322608bdd8 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 126 138 1.4E-39 T 14-10-2018 IPR017861 Kae1/TsaD family ABED_0155 248f7114eabcab9f99730b322608bdd8 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 149 170 1.4E-39 T 14-10-2018 IPR017861 Kae1/TsaD family ABED_0155 248f7114eabcab9f99730b322608bdd8 333 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 332 55.017 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ABED_0155 248f7114eabcab9f99730b322608bdd8 333 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 3 306 1.4E-106 T 14-10-2018 IPR017861 Kae1/TsaD family ABED_0155 248f7114eabcab9f99730b322608bdd8 333 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 2 313 5.1E-110 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ABED_0155 248f7114eabcab9f99730b322608bdd8 333 ProSitePatterns PS01016 Glycoprotease family signature. 92 112 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 ABED_0155 248f7114eabcab9f99730b322608bdd8 333 Gene3D G3DSA:3.30.420.40 124 293 3.4E-101 T 14-10-2018 ABED_0155 248f7114eabcab9f99730b322608bdd8 333 Gene3D G3DSA:3.30.420.40 2 314 3.4E-101 T 14-10-2018 ABED_0155 248f7114eabcab9f99730b322608bdd8 333 SUPERFAMILY SSF53067 1 118 3.24E-19 T 14-10-2018 ABED_1922 1f18fb360dbd742adced8cfbae4fccab 74 Pfam PF02416 mttA/Hcf106 family 5 57 2.5E-19 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ABED_1922 1f18fb360dbd742adced8cfbae4fccab 74 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 74 19.949 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABED_1922 1f18fb360dbd742adced8cfbae4fccab 74 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 49 6.5E-20 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABED_1488 f239a45eb32529411c4484b00860052c 211 SUPERFAMILY SSF55681 2 161 1.18E-34 T 14-10-2018 ABED_1488 f239a45eb32529411c4484b00860052c 211 Gene3D G3DSA:3.30.930.10 1 189 2.9E-34 T 14-10-2018 ABED_1488 f239a45eb32529411c4484b00860052c 211 Pfam PF03099 Biotin/lipoate A/B protein ligase family 9 117 7.8E-16 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABED_1488 f239a45eb32529411c4484b00860052c 211 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 3 204 4.9E-37 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABED_0299 88cbf40510bccd8825a5a14f964599f5 388 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 383 2.3E-138 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 ABED_0299 88cbf40510bccd8825a5a14f964599f5 388 Gene3D G3DSA:3.90.1150.10 13 381 2.0E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0299 88cbf40510bccd8825a5a14f964599f5 388 SUPERFAMILY SSF53383 1 384 1.77E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0299 88cbf40510bccd8825a5a14f964599f5 388 Pfam PF00155 Aminotransferase class I and II 55 380 1.4E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABED_0299 88cbf40510bccd8825a5a14f964599f5 388 Gene3D G3DSA:3.40.640.10 68 290 2.0E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_1794 217d68f43d7cd87249592ad692eb7d6c 510 PIRSF PIRSF003128 1 510 1.5E-105 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ABED_1794 217d68f43d7cd87249592ad692eb7d6c 510 Pfam PF13476 AAA domain 4 334 2.6E-7 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain ABED_1794 217d68f43d7cd87249592ad692eb7d6c 510 SUPERFAMILY SSF52540 2 482 2.66E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1794 217d68f43d7cd87249592ad692eb7d6c 510 Gene3D G3DSA:3.40.50.300 1 221 9.1E-13 T 14-10-2018 ABED_1794 217d68f43d7cd87249592ad692eb7d6c 510 Gene3D G3DSA:3.40.50.300 237 510 1.5E-36 T 14-10-2018 ABED_1635 65a0cbb7a450e5d03ba4242765c07e72 249 SUPERFAMILY SSF56112 43 187 2.7E-11 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily ABED_1635 65a0cbb7a450e5d03ba4242765c07e72 249 Gene3D G3DSA:1.10.510.10 121 211 2.1E-7 T 14-10-2018 ABED_1635 65a0cbb7a450e5d03ba4242765c07e72 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 129 214 9.6E-5 T 14-10-2018 ABED_1635 65a0cbb7a450e5d03ba4242765c07e72 249 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 150 162 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 ABED_0442 c1baf6d0399d742fbfd128a51fe03706 106 Pfam PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit 31 105 1.1E-42 T 14-10-2018 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 ABED_0442 c1baf6d0399d742fbfd128a51fe03706 106 SUPERFAMILY SSF69131 29 105 1.83E-36 T 14-10-2018 IPR036487 Quinohemoprotein amine dehydrogenase, gamma subunit structural domain superfamily ABED_0442 c1baf6d0399d742fbfd128a51fe03706 106 ProDom PD591508 QUINOHEMOPROTEIN AMINE SUBUNIT DEHYDROGENASE GAMMA 1.4.99.- CATALYTIC QH-AMDH CTQ 3D-STRUCTURE 38 105 4.0E-23 T 14-10-2018 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 ABED_0442 c1baf6d0399d742fbfd128a51fe03706 106 Gene3D G3DSA:4.10.940.10 29 106 1.6E-35 T 14-10-2018 IPR036487 Quinohemoprotein amine dehydrogenase, gamma subunit structural domain superfamily ABED_0624 9b4f3b32d38e75d88d5b756989e0308e 430 SUPERFAMILY SSF53383 3 402 2.74E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0624 9b4f3b32d38e75d88d5b756989e0308e 430 Pfam PF00202 Aminotransferase class-III 31 346 4.7E-42 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABED_0624 9b4f3b32d38e75d88d5b756989e0308e 430 Gene3D G3DSA:3.40.640.10 66 306 1.3E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0624 9b4f3b32d38e75d88d5b756989e0308e 430 Gene3D G3DSA:3.90.1150.10 5 399 1.3E-104 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0238 08d8bce4a3eedab2e086774a5cb257dc 110 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 110 17.156 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 ABED_0238 08d8bce4a3eedab2e086774a5cb257dc 110 Pfam PF02021 Uncharacterised protein family UPF0102 9 97 1.3E-17 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 ABED_0238 08d8bce4a3eedab2e086774a5cb257dc 110 SUPERFAMILY SSF52980 8 105 3.22E-21 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABED_0238 08d8bce4a3eedab2e086774a5cb257dc 110 Gene3D G3DSA:3.40.1350.10 8 109 1.3E-20 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 2.1E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 499 2.1E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 578 2.1E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 501 530 2.1E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 587 8.1E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 SMART SM00283 374 623 3.4E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 SUPERFAMILY SSF58104 245 616 1.44E-55 T 14-10-2018 ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 178 1.2E-16 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABED_0502 48c9a8067e4e0d9863d497f82c4dddee 633 Gene3D G3DSA:1.10.287.950 324 619 7.7E-60 T 14-10-2018 ABED_1140 ca8bff8353ef23ea02596089fe12ccf1 165 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 160 1.2E-35 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 ABED_1140 ca8bff8353ef23ea02596089fe12ccf1 165 Gene3D G3DSA:3.40.50.300 3 164 5.9E-38 T 14-10-2018 ABED_1140 ca8bff8353ef23ea02596089fe12ccf1 165 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 121 1.7E-25 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 ABED_1140 ca8bff8353ef23ea02596089fe12ccf1 165 SUPERFAMILY SSF52540 7 157 1.08E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 326 1.8E-25 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 Gene3D G3DSA:3.40.50.300 19 182 3.8E-43 T 14-10-2018 ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 329 3.0E-26 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 Gene3D G3DSA:1.10.10.10 258 335 2.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 326 2.6E-135 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 11 236 9.0E-111 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 SMART SM00382 52 187 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 SUPERFAMILY SSF52540 21 251 9.36E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 345 149.853 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 SUPERFAMILY SSF46785 258 330 4.35E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1612 d81d40362c7c9de2d602a4d70e436be9 345 Gene3D G3DSA:1.10.8.60 183 256 9.3E-26 T 14-10-2018 ABED_0497 3ba050b59115d372af237f356e833a06 339 Gene3D G3DSA:3.20.20.100 1 339 6.1E-109 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABED_0497 3ba050b59115d372af237f356e833a06 339 Pfam PF00248 Aldo/keto reductase family 16 330 1.1E-74 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABED_0497 3ba050b59115d372af237f356e833a06 339 SUPERFAMILY SSF51430 1 333 2.36E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABED_0523 411456653292429f874705dc3d52df48 200 SUPERFAMILY SSF52540 5 195 1.07E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0523 411456653292429f874705dc3d52df48 200 Gene3D G3DSA:3.40.50.300 4 198 6.9E-49 T 14-10-2018 ABED_0523 411456653292429f874705dc3d52df48 200 Pfam PF00005 ABC transporter 24 151 3.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0523 411456653292429f874705dc3d52df48 200 SMART SM00382 32 198 7.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0779 9c52c047a7cde2bba92641c500d29ae4 277 Gene3D G3DSA:3.40.50.970 28 233 2.9E-29 T 14-10-2018 ABED_0779 9c52c047a7cde2bba92641c500d29ae4 277 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 5.8E-36 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABED_0779 9c52c047a7cde2bba92641c500d29ae4 277 SUPERFAMILY SSF52518 14 245 2.11E-71 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold ABED_1011 4a94a0590023c9d079b6b1f27a9f1163 343 SUPERFAMILY SSF51395 1 330 2.02E-101 T 14-10-2018 ABED_1011 4a94a0590023c9d079b6b1f27a9f1163 343 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 326 4.7E-75 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABED_1011 4a94a0590023c9d079b6b1f27a9f1163 343 Gene3D G3DSA:3.20.20.70 3 342 4.1E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0087 b4a8cb956e5a6223c4ada9a1bc85be2c 309 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 15 300 3.2E-87 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 ABED_0087 b4a8cb956e5a6223c4ada9a1bc85be2c 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 298 2.9E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_0087 b4a8cb956e5a6223c4ada9a1bc85be2c 309 SUPERFAMILY SSF161098 28 292 4.58E-32 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0087 b4a8cb956e5a6223c4ada9a1bc85be2c 309 Gene3D G3DSA:1.10.3720.10 70 303 1.2E-34 T 14-10-2018 IPR035906 MetI-like superfamily ABED_1984 a5b2873e5a3ad4c84c7f3392b00891b5 140 Pfam PF05618 Putative ATP-dependant zinc protease 6 137 6.1E-21 T 14-10-2018 ABED_1984 a5b2873e5a3ad4c84c7f3392b00891b5 140 SUPERFAMILY SSF50630 6 136 1.15E-33 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily ABED_1984 a5b2873e5a3ad4c84c7f3392b00891b5 140 Gene3D G3DSA:2.40.70.10 3 130 1.5E-22 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily ABED_0082 32b3d7b71673ae30165054eb7ff8853b 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 2.6E-22 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0082 32b3d7b71673ae30165054eb7ff8853b 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 9.0E-17 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0082 32b3d7b71673ae30165054eb7ff8853b 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 13.992 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0082 32b3d7b71673ae30165054eb7ff8853b 86 SUPERFAMILY SSF46992 3 86 1.57E-23 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0082 32b3d7b71673ae30165054eb7ff8853b 86 Pfam PF01649 Ribosomal protein S20 2 84 2.0E-22 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0082 32b3d7b71673ae30165054eb7ff8853b 86 Gene3D G3DSA:1.20.58.110 1 86 8.2E-22 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1468 5157d9dbff8b4fb0aa97c91c6edfa39f 167 Pfam PF00710 Asparaginase, N-terminal 5 148 1.0E-21 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 ABED_1468 5157d9dbff8b4fb0aa97c91c6edfa39f 167 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 5.8E-7 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABED_1468 5157d9dbff8b4fb0aa97c91c6edfa39f 167 PRINTS PR00139 Asparaginase/glutaminase family signature 78 96 5.8E-7 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABED_1468 5157d9dbff8b4fb0aa97c91c6edfa39f 167 Gene3D G3DSA:3.40.50.1170 3 159 1.9E-24 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 ABED_1468 5157d9dbff8b4fb0aa97c91c6edfa39f 167 SUPERFAMILY SSF53774 3 159 3.14E-28 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 ABED_1436 5c14dfcafde238374c590d14483ded3d 271 Pfam PF13852 Protein of unknown function (DUF4197) 51 270 1.7E-76 T 14-10-2018 IPR025245 Protein of unknown function DUF4197 ABED_0942 b81fb00020c1b1aa26b5b0749cd3b11d 593 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 583 6.1E-60 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABED_0942 b81fb00020c1b1aa26b5b0749cd3b11d 593 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 4 584 3.2E-177 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABED_0942 b81fb00020c1b1aa26b5b0749cd3b11d 593 SUPERFAMILY SSF56519 40 236 3.27E-33 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABED_0942 b81fb00020c1b1aa26b5b0749cd3b11d 593 Pfam PF03717 Penicillin-binding Protein dimerisation domain 50 221 7.2E-30 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABED_0942 b81fb00020c1b1aa26b5b0749cd3b11d 593 Gene3D G3DSA:3.90.1310.10 50 229 7.3E-34 T 14-10-2018 ABED_0942 b81fb00020c1b1aa26b5b0749cd3b11d 593 Gene3D G3DSA:3.40.710.10 237 587 3.7E-86 T 14-10-2018 ABED_0942 b81fb00020c1b1aa26b5b0749cd3b11d 593 SUPERFAMILY SSF56601 238 585 5.63E-88 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABED_0942 b81fb00020c1b1aa26b5b0749cd3b11d 593 Gene3D G3DSA:3.30.1390.30 69 150 7.3E-34 T 14-10-2018 ABED_0439 e8be6f3f45a9e7324314c83efa1dac78 270 Gene3D G3DSA:1.10.10.60 157 257 1.2E-10 T 14-10-2018 ABED_0439 e8be6f3f45a9e7324314c83efa1dac78 270 SMART SM00342 170 255 0.0075 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1005 2002319316df60e3bb847a3f308d4263 416 Gene3D G3DSA:1.20.1260.10 182 362 1.1E-8 T 14-10-2018 IPR012347 Ferritin-like ABED_1005 2002319316df60e3bb847a3f308d4263 416 SUPERFAMILY SSF47240 174 333 1.39E-31 T 14-10-2018 IPR009078 Ferritin-like superfamily ABED_0221 6cad70aa3dfd13944c725818cf90e447 125 SUPERFAMILY SSF141457 6 120 9.68E-20 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily ABED_0221 6cad70aa3dfd13944c725818cf90e447 125 Gene3D G3DSA:2.30.290.10 1 120 2.3E-11 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily ABED_0221 6cad70aa3dfd13944c725818cf90e447 125 Pfam PF02623 FliW protein 4 110 5.7E-16 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 ABED_0291 05ac2e26bff52fe078a44e41fd9c5347 424 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 54 69 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0291 05ac2e26bff52fe078a44e41fd9c5347 424 Pfam PF00146 NADH dehydrogenase 11 310 3.2E-89 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0291 05ac2e26bff52fe078a44e41fd9c5347 424 Pfam PF00146 NADH dehydrogenase 342 417 1.8E-13 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0291 05ac2e26bff52fe078a44e41fd9c5347 424 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 3 423 22.398 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0291 05ac2e26bff52fe078a44e41fd9c5347 424 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 226 239 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0111 8ed40a97de6a0f387ae8faa9480c8dc0 357 SMART SM00244 58 239 9.0E-19 T 14-10-2018 IPR001107 Band 7 domain ABED_0111 8ed40a97de6a0f387ae8faa9480c8dc0 357 Pfam PF01145 SPFH domain / Band 7 family 62 259 1.8E-27 T 14-10-2018 IPR001107 Band 7 domain ABED_0111 8ed40a97de6a0f387ae8faa9480c8dc0 357 PRINTS PR00679 Prohibitin signature 183 199 1.4E-13 T 14-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 ABED_0111 8ed40a97de6a0f387ae8faa9480c8dc0 357 PRINTS PR00679 Prohibitin signature 234 257 1.4E-13 T 14-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 ABED_0111 8ed40a97de6a0f387ae8faa9480c8dc0 357 PRINTS PR00679 Prohibitin signature 257 273 1.4E-13 T 14-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 ABED_0111 8ed40a97de6a0f387ae8faa9480c8dc0 357 PRINTS PR00679 Prohibitin signature 137 156 1.4E-13 T 14-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 ABED_0111 8ed40a97de6a0f387ae8faa9480c8dc0 357 PRINTS PR00679 Prohibitin signature 160 178 1.4E-13 T 14-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 ABED_0111 8ed40a97de6a0f387ae8faa9480c8dc0 357 SUPERFAMILY SSF117892 90 246 6.15E-10 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily ABED_0016 901b3e782eff3adfb6cbb1b7be385536 392 Gene3D G3DSA:1.20.1250.20 209 391 9.5E-12 T 14-10-2018 ABED_0016 901b3e782eff3adfb6cbb1b7be385536 392 SUPERFAMILY SSF103473 13 387 6.15E-39 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_0016 901b3e782eff3adfb6cbb1b7be385536 392 Gene3D G3DSA:1.20.1250.20 10 196 2.1E-15 T 14-10-2018 ABED_0016 901b3e782eff3adfb6cbb1b7be385536 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 22 379 1.0E-65 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB ABED_1238 c04076856ab35ddfa9583b0d17a72a5e 415 Pfam PF00301 Rubredoxin 270 303 1.3E-5 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 ABED_1238 c04076856ab35ddfa9583b0d17a72a5e 415 Gene3D G3DSA:2.20.28.10 268 306 3.2E-6 T 14-10-2018 ABED_1238 c04076856ab35ddfa9583b0d17a72a5e 415 SUPERFAMILY SSF57802 281 310 9.82E-6 T 14-10-2018 ABED_1000 01f29c0edf9d39455c59ad1400245c69 174 SUPERFAMILY SSF49777 21 174 5.76E-50 T 14-10-2018 IPR036610 PEBP-like superfamily ABED_1000 01f29c0edf9d39455c59ad1400245c69 174 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 37 171 4.1E-43 T 14-10-2018 IPR005247 YbhB/YbcL ABED_1000 01f29c0edf9d39455c59ad1400245c69 174 Pfam PF01161 Phosphatidylethanolamine-binding protein 37 172 8.5E-38 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein ABED_1000 01f29c0edf9d39455c59ad1400245c69 174 Gene3D G3DSA:3.90.280.10 15 174 9.3E-53 T 14-10-2018 IPR036610 PEBP-like superfamily ABED_1678 0a7ea794b49f31142c6ca793e9bf7ad8 267 SUPERFAMILY SSF51569 3 265 1.01E-83 T 14-10-2018 ABED_1678 0a7ea794b49f31142c6ca793e9bf7ad8 267 Gene3D G3DSA:3.20.20.70 1 266 4.8E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1678 0a7ea794b49f31142c6ca793e9bf7ad8 267 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 3 262 1.4E-108 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABED_1678 0a7ea794b49f31142c6ca793e9bf7ad8 267 Pfam PF00793 DAHP synthetase I family 4 252 3.9E-60 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABED_0552 7b5013b84f1713b60652f02c51ff972f 143 SUPERFAMILY SSF46785 12 138 1.64E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0552 7b5013b84f1713b60652f02c51ff972f 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0552 7b5013b84f1713b60652f02c51ff972f 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0552 7b5013b84f1713b60652f02c51ff972f 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0552 7b5013b84f1713b60652f02c51ff972f 143 Pfam PF01047 MarR family 36 92 5.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0552 7b5013b84f1713b60652f02c51ff972f 143 SMART SM00347 29 127 2.8E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0552 7b5013b84f1713b60652f02c51ff972f 143 Gene3D G3DSA:1.10.10.10 4 141 3.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1428 a747ba70a13dea83250d034655d40f6a 169 SUPERFAMILY SSF52218 1 145 5.83E-25 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_1428 a747ba70a13dea83250d034655d40f6a 169 Gene3D G3DSA:3.40.50.360 1 169 9.2E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_1428 a747ba70a13dea83250d034655d40f6a 169 Pfam PF03358 NADPH-dependent FMN reductase 3 143 9.9E-24 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABED_0361 0f3b4b52b17a4c70685878d8f3fffff7 299 Gene3D G3DSA:1.10.600.10 1 299 1.1E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABED_0361 0f3b4b52b17a4c70685878d8f3fffff7 299 SUPERFAMILY SSF48576 30 297 5.44E-66 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABED_0361 0f3b4b52b17a4c70685878d8f3fffff7 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 66 80 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABED_0361 0f3b4b52b17a4c70685878d8f3fffff7 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 184 196 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABED_0361 0f3b4b52b17a4c70685878d8f3fffff7 299 Pfam PF00348 Polyprenyl synthetase 31 246 2.1E-60 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 306 3.6E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 SUPERFAMILY SSF51905 3 334 4.28E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 300 1.4E-6 T 14-10-2018 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.4E-6 T 14-10-2018 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 182 1.4E-6 T 14-10-2018 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.6E-11 T 14-10-2018 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 3.6E-11 T 14-10-2018 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 3.6E-11 T 14-10-2018 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 3.6E-11 T 14-10-2018 ABED_2030 ff2125ef3f0680a0401c73d0a08d9fe7 400 Gene3D G3DSA:3.50.50.100 1 395 3.1E-84 T 14-10-2018 ABED_1722 2d4fc45af1e6595b44d482f866e5fd21 73 Pfam PF02597 ThiS family 11 73 2.8E-11 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ABED_1722 2d4fc45af1e6595b44d482f866e5fd21 73 SUPERFAMILY SSF54285 1 73 3.11E-11 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABED_1722 2d4fc45af1e6595b44d482f866e5fd21 73 Gene3D G3DSA:3.10.20.30 1 73 6.5E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily ABED_0127 796418635f28e3871fc8bb7e6da4911c 150 Gene3D G3DSA:1.10.10.10 7 150 9.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0127 796418635f28e3871fc8bb7e6da4911c 150 SUPERFAMILY SSF46785 17 148 3.98E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0127 796418635f28e3871fc8bb7e6da4911c 150 Pfam PF01047 MarR family 43 100 1.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0127 796418635f28e3871fc8bb7e6da4911c 150 SMART SM00347 36 136 9.2E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_1489 105a5317e5a5124e0311aae3bb8a6ec3 297 Pfam PF03547 Membrane transport protein 170 292 2.6E-13 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_1489 105a5317e5a5124e0311aae3bb8a6ec3 297 Pfam PF03547 Membrane transport protein 1 139 7.9E-11 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_1843 40115a96ae7f08ef6bf0540494608017 273 PIRSF PIRSF006250 1 273 2.8E-83 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 ABED_1843 40115a96ae7f08ef6bf0540494608017 273 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 8 271 1.0E-89 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 ABED_1843 40115a96ae7f08ef6bf0540494608017 273 SUPERFAMILY SSF54675 2 102 4.71E-23 T 14-10-2018 ABED_1843 40115a96ae7f08ef6bf0540494608017 273 Gene3D G3DSA:3.90.1170.20 10 268 1.2E-91 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 ABED_1843 40115a96ae7f08ef6bf0540494608017 273 Gene3D G3DSA:3.20.20.70 117 262 1.2E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1843 40115a96ae7f08ef6bf0540494608017 273 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 103 271 5.5E-60 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 ABED_1843 40115a96ae7f08ef6bf0540494608017 273 SUPERFAMILY SSF51690 103 271 9.03E-56 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABED_1843 40115a96ae7f08ef6bf0540494608017 273 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 101 4.6E-21 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 510 539 1.7E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 587 614 1.7E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 664 693 1.7E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 616 645 1.7E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 SUPERFAMILY SSF58104 420 734 1.83E-52 T 14-10-2018 ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 Gene3D G3DSA:1.10.287.950 435 734 8.3E-55 T 14-10-2018 ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 Pfam PF08376 Nitrate and nitrite sensing 56 294 1.2E-49 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 549 704 2.3E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1384 aadbd44c87a05af67fee28f2ff8843b2 745 SMART SM00283 489 738 1.2E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_2053 62ef81ddc249854c119b2f716c5376f0 330 Pfam PF02719 Polysaccharide biosynthesis protein 7 280 8.6E-105 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABED_2053 62ef81ddc249854c119b2f716c5376f0 330 Gene3D G3DSA:3.90.25.30 167 314 1.9E-137 T 14-10-2018 ABED_2053 62ef81ddc249854c119b2f716c5376f0 330 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 1.5E-171 T 14-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 ABED_2053 62ef81ddc249854c119b2f716c5376f0 330 SUPERFAMILY SSF51735 1 268 4.0E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily ABED_2053 62ef81ddc249854c119b2f716c5376f0 330 Gene3D G3DSA:3.40.50.720 5 310 1.9E-137 T 14-10-2018 ABED_1557 7140dc2f6ec10d6e4d5d68179af050c0 378 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 132 350 4.9E-96 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 ABED_1557 7140dc2f6ec10d6e4d5d68179af050c0 378 PIRSF PIRSF028756 72 377 1.6E-95 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 ABED_1557 7140dc2f6ec10d6e4d5d68179af050c0 378 PIRSF PIRSF028756 19 70 330.0 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 ABED_1557 7140dc2f6ec10d6e4d5d68179af050c0 378 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 131 349 1.7E-88 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related ABED_1557 7140dc2f6ec10d6e4d5d68179af050c0 378 Gene3D G3DSA:3.40.50.300 78 372 8.1E-89 T 14-10-2018 ABED_1557 7140dc2f6ec10d6e4d5d68179af050c0 378 SUPERFAMILY SSF52540 155 338 4.26E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0401 257acfe19e3db2b0d9ba23ed9764831b 159 Gene3D G3DSA:2.30.30.40 19 146 2.2E-29 T 14-10-2018 ABED_0401 257acfe19e3db2b0d9ba23ed9764831b 159 SMART SM00260 12 152 8.1E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABED_0401 257acfe19e3db2b0d9ba23ed9764831b 159 SUPERFAMILY SSF50341 13 156 1.18E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABED_0401 257acfe19e3db2b0d9ba23ed9764831b 159 Gene3D G3DSA:2.40.50.180 35 147 2.2E-29 T 14-10-2018 ABED_0401 257acfe19e3db2b0d9ba23ed9764831b 159 Pfam PF01584 CheW-like domain 16 155 5.7E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABED_0056 6ddd6b57450dfa96854f8d206ee343ba 178 Gene3D G3DSA:3.40.50.1580 7 176 1.1E-19 T 14-10-2018 ABED_0056 6ddd6b57450dfa96854f8d206ee343ba 178 SUPERFAMILY SSF53167 2 170 1.83E-20 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ABED_0056 6ddd6b57450dfa96854f8d206ee343ba 178 Pfam PF01048 Phosphorylase superfamily 26 168 2.9E-7 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ABED_1024 3ea86f01d310808eaec18e0e8f1e1c60 222 SUPERFAMILY SSF64438 3 221 1.59E-62 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic ABED_1024 3ea86f01d310808eaec18e0e8f1e1c60 222 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 12 221 1.0E-52 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ABED_1024 3ea86f01d310808eaec18e0e8f1e1c60 222 Gene3D G3DSA:3.60.140.10 2 222 6.6E-68 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily ABED_1024 3ea86f01d310808eaec18e0e8f1e1c60 222 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 13 219 2.1E-60 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ABED_0231 d1540529f1f9c2509a358be862f9561f 204 Pfam PF04028 Domain of unknown function (DUF374) 59 126 1.2E-25 T 14-10-2018 IPR007172 Domain of unknown function DUF374 ABED_0231 d1540529f1f9c2509a358be862f9561f 204 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 5 127 6.0E-28 T 14-10-2018 IPR007172 Domain of unknown function DUF374 ABED_0392 e679a53a58d4494cd097d414d28fbcb4 470 Gene3D G3DSA:1.10.287.950 123 347 4.5E-43 T 14-10-2018 ABED_0392 e679a53a58d4494cd097d414d28fbcb4 470 Pfam PF13682 Chemoreceptor zinc-binding domain 345 407 7.0E-13 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain ABED_0392 e679a53a58d4494cd097d414d28fbcb4 470 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 170 324 9.2E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0392 e679a53a58d4494cd097d414d28fbcb4 470 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 226 253 1.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0392 e679a53a58d4494cd097d414d28fbcb4 470 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 255 284 1.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABED_0392 e679a53a58d4494cd097d414d28fbcb4 470 SMART SM00283 129 344 4.0E-19 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0392 e679a53a58d4494cd097d414d28fbcb4 470 SUPERFAMILY SSF58104 149 335 6.15E-42 T 14-10-2018 ABED_2079 a9f6391a844f92d4933c74899c7b393c 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 25 224 2.3E-49 T 14-10-2018 IPR006214 Bax inhibitor 1-related ABED_0317 a1874784d7ecdd1e5becf566568ca606 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 132 1.2E-7 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_0317 a1874784d7ecdd1e5becf566568ca606 676 Pfam PF00593 TonB dependent receptor 182 674 7.8E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_0317 a1874784d7ecdd1e5becf566568ca606 676 SUPERFAMILY SSF56935 24 676 1.63E-68 T 14-10-2018 ABED_0317 a1874784d7ecdd1e5becf566568ca606 676 Gene3D G3DSA:2.170.130.10 35 144 7.8E-25 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_0317 a1874784d7ecdd1e5becf566568ca606 676 Gene3D G3DSA:2.40.170.20 146 676 5.1E-69 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1723 65c19bde8aac2d26cbb8306a44776ac7 219 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 219 20.238 T 14-10-2018 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 ABED_1723 65c19bde8aac2d26cbb8306a44776ac7 219 SUPERFAMILY SSF53850 1 219 6.24E-49 T 14-10-2018 ABED_1723 65c19bde8aac2d26cbb8306a44776ac7 219 Gene3D G3DSA:3.40.190.10 1 109 1.5E-11 T 14-10-2018 ABED_1723 65c19bde8aac2d26cbb8306a44776ac7 219 Gene3D G3DSA:3.40.190.10 113 219 1.5E-16 T 14-10-2018 ABED_1723 65c19bde8aac2d26cbb8306a44776ac7 219 Pfam PF02621 Menaquinone biosynthesis 105 215 1.0E-15 T 14-10-2018 IPR003773 Menaquinone biosynthesis enzyme ABED_0040 4f3a061983c4a45fcfed6df23854f04c 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 2.6E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABED_0040 4f3a061983c4a45fcfed6df23854f04c 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 2.6E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABED_0040 4f3a061983c4a45fcfed6df23854f04c 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 2.6E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABED_0040 4f3a061983c4a45fcfed6df23854f04c 157 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 6.0E-51 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABED_0040 4f3a061983c4a45fcfed6df23854f04c 157 SUPERFAMILY SSF51230 81 155 2.22E-22 T 14-10-2018 IPR011053 Single hybrid motif ABED_0040 4f3a061983c4a45fcfed6df23854f04c 157 Pfam PF00364 Biotin-requiring enzyme 81 153 4.4E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment ABED_0040 4f3a061983c4a45fcfed6df23854f04c 157 Gene3D G3DSA:2.40.50.100 76 155 3.1E-28 T 14-10-2018 ABED_0223 dbdc925c56bbdfb53299d63de02e1599 118 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 97 7.4E-29 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0223 dbdc925c56bbdfb53299d63de02e1599 118 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 4 98 20.895 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABED_0223 dbdc925c56bbdfb53299d63de02e1599 118 SUPERFAMILY SSF54995 5 104 3.79E-32 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0223 dbdc925c56bbdfb53299d63de02e1599 118 Pfam PF01250 Ribosomal protein S6 6 95 1.5E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0223 dbdc925c56bbdfb53299d63de02e1599 118 Gene3D G3DSA:3.30.70.60 1 104 6.9E-32 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ABED_0323 2909cea8f700f036afbc3c643a98ec17 176 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 15 156 5.9E-48 T 14-10-2018 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 ABED_0323 2909cea8f700f036afbc3c643a98ec17 176 Gene3D G3DSA:1.10.3820.10 2 168 4.4E-41 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily ABED_0323 2909cea8f700f036afbc3c643a98ec17 176 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 158 2.6E-16 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal ABED_0323 2909cea8f700f036afbc3c643a98ec17 176 SUPERFAMILY SSF48695 10 156 2.28E-24 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily ABED_1484 e2da711bf2890e37efae926554a02102 170 Hamap MF_01398 ATP synthase subunit b [atpF]. 15 158 10.544 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABED_1484 e2da711bf2890e37efae926554a02102 170 Pfam PF00430 ATP synthase B/B' CF(0) 29 144 3.9E-14 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 Pfam PF13328 HD domain 36 193 2.5E-36 T 14-10-2018 IPR003607 HD/PDEase domain ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 SUPERFAMILY SSF81271 388 457 1.5E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 SUPERFAMILY SSF109604 30 208 1.88E-55 T 14-10-2018 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 SMART SM00954 256 365 1.1E-57 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 SUPERFAMILY SSF81301 210 373 2.62E-53 T 14-10-2018 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 Gene3D G3DSA:3.10.20.30 393 464 4.3E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 Gene3D G3DSA:3.30.460.10 211 344 4.5E-40 T 14-10-2018 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 SMART SM00471 49 171 3.7E-8 T 14-10-2018 IPR003607 HD/PDEase domain ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 Pfam PF04607 Region found in RelA / SpoT proteins 256 364 4.1E-33 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 40 698 2.9E-185 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 Gene3D G3DSA:1.10.3210.10 11 208 2.4E-60 T 14-10-2018 ABED_0602 6fc3cdb51f98fa15d34c12eddf5a2404 714 Pfam PF02824 TGS domain 400 457 2.9E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ABED_0711 efeb0c19bf603bdbe0b719de57ca09f8 182 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 179 36.144 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0711 efeb0c19bf603bdbe0b719de57ca09f8 182 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.9E-37 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0711 efeb0c19bf603bdbe0b719de57ca09f8 182 Pfam PF00281 Ribosomal protein L5 30 80 1.4E-15 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0711 efeb0c19bf603bdbe0b719de57ca09f8 182 PIRSF PIRSF002161 1 182 1.4E-57 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0711 efeb0c19bf603bdbe0b719de57ca09f8 182 Gene3D G3DSA:3.30.1440.10 1 179 3.3E-64 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0711 efeb0c19bf603bdbe0b719de57ca09f8 182 SUPERFAMILY SSF55282 4 178 9.18E-62 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1045 19d1e0b9804921dcc371a22a5aed1d72 619 Pfam PF00593 TonB dependent receptor 208 617 6.2E-37 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_1045 19d1e0b9804921dcc371a22a5aed1d72 619 Gene3D G3DSA:2.170.130.10 20 151 4.6E-37 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_1045 19d1e0b9804921dcc371a22a5aed1d72 619 Gene3D G3DSA:2.40.170.20 153 619 2.3E-82 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1045 19d1e0b9804921dcc371a22a5aed1d72 619 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 146 1.7E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1045 19d1e0b9804921dcc371a22a5aed1d72 619 SUPERFAMILY SSF56935 21 619 5.66E-109 T 14-10-2018 ABED_1680 90b44e239e51011a5d3b34a8eef90379 131 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 130 8.8E-36 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 ABED_1680 90b44e239e51011a5d3b34a8eef90379 131 Pfam PF01029 NusB family 6 130 1.0E-29 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ABED_1680 90b44e239e51011a5d3b34a8eef90379 131 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 2 131 17.381 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 ABED_1680 90b44e239e51011a5d3b34a8eef90379 131 Gene3D G3DSA:1.10.940.10 1 131 4.6E-35 T 14-10-2018 IPR035926 NusB-like superfamily ABED_1680 90b44e239e51011a5d3b34a8eef90379 131 SUPERFAMILY SSF48013 3 130 6.41E-33 T 14-10-2018 IPR035926 NusB-like superfamily ABED_0975 3b2561dfbaee40900403f01452d08ebe 237 Gene3D G3DSA:1.10.287.470 64 123 3.7E-31 T 14-10-2018 ABED_0975 3b2561dfbaee40900403f01452d08ebe 237 Gene3D G3DSA:2.40.50.100 30 162 3.7E-31 T 14-10-2018 ABED_0975 3b2561dfbaee40900403f01452d08ebe 237 Pfam PF13437 HlyD family secretion protein 128 227 1.0E-15 T 14-10-2018 ABED_0975 3b2561dfbaee40900403f01452d08ebe 237 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 18 233 1.2E-31 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABED_0975 3b2561dfbaee40900403f01452d08ebe 237 SUPERFAMILY SSF111369 34 233 1.26E-21 T 14-10-2018 ABED_0975 3b2561dfbaee40900403f01452d08ebe 237 Gene3D G3DSA:2.40.30.170 27 234 3.7E-31 T 14-10-2018 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 320 2.4E-86 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 321 35.03 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 Pfam PF00579 tRNA synthetases class I (W and Y) 1 275 1.1E-54 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 Gene3D G3DSA:3.40.50.620 2 320 4.7E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 1.1E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 190 200 1.1E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 1.1E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 1.1E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 Gene3D G3DSA:1.10.240.10 185 288 4.7E-109 T 14-10-2018 ABED_0309 df0dd0c92d95a6b3ee339b2581366cac 321 SUPERFAMILY SSF52374 2 320 6.76E-82 T 14-10-2018 ABED_0681 2fef61e0e2c32156398ccf8b1794c6a8 699 Pfam PF02554 Carbon starvation protein CstA 28 405 7.6E-165 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 ABED_0681 2fef61e0e2c32156398ccf8b1794c6a8 699 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 460 587 8.5E-34 T 14-10-2018 IPR025299 CstA, C-terminal domain ABED_0887 65a6058cd0f5a300cb86c54cbb54ba8b 214 Pfam PF02361 Cobalt transport protein 13 183 3.5E-11 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component ABED_2142 e705be35c480d94703c00b7b417dc882 237 Gene3D G3DSA:1.20.144.10 3 236 1.4E-10 T 14-10-2018 ABED_2142 e705be35c480d94703c00b7b417dc882 237 SUPERFAMILY SSF48317 14 223 9.81E-12 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABED_2142 e705be35c480d94703c00b7b417dc882 237 Pfam PF01569 PAP2 superfamily 95 222 4.5E-16 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABED_0798 b5f879e246f8a50d2bd6cf81f2a468d4 203 Pfam PF05565 Siphovirus Gp157 6 146 2.0E-7 T 14-10-2018 IPR008840 Siphovirus Gp157 ABED_0284 25194df4958ec46645d2b163be77313b 266 SUPERFAMILY SSF81343 1 238 5.4E-78 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0284 25194df4958ec46645d2b163be77313b 266 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 109 218 4.3E-15 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0284 25194df4958ec46645d2b163be77313b 266 Gene3D G3DSA:1.20.1300.10 1 251 6.7E-86 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABED_0284 25194df4958ec46645d2b163be77313b 266 PIRSF PIRSF000177 1 260 9.8E-112 T 14-10-2018 IPR004224 Fumarate reductase type B, transmembrane subunit GO:0006099 ABED_1155 506b9b0e0e1289a69bf7786c86665d37 191 Gene3D G3DSA:3.40.50.10990 2 171 2.0E-63 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABED_1155 506b9b0e0e1289a69bf7786c86665d37 191 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 191 9.5E-76 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABED_1155 506b9b0e0e1289a69bf7786c86665d37 191 Pfam PF00925 GTP cyclohydrolase II 9 167 1.9E-59 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABED_1155 506b9b0e0e1289a69bf7786c86665d37 191 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 191 36.912 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABED_1155 506b9b0e0e1289a69bf7786c86665d37 191 SUPERFAMILY SSF142695 8 169 7.72E-53 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABED_0816 5b58f8dc6266f76531403d12bd2b3413 79 SUPERFAMILY SSF47413 2 63 6.44E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABED_0816 5b58f8dc6266f76531403d12bd2b3413 79 Gene3D G3DSA:1.10.260.40 2 70 2.7E-13 T 14-10-2018 ABED_0816 5b58f8dc6266f76531403d12bd2b3413 79 Pfam PF01381 Helix-turn-helix 10 63 1.2E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_0816 5b58f8dc6266f76531403d12bd2b3413 79 SMART SM00530 9 65 8.1E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_0562 90580cf3f080b16e6fdd92741494baa0 117 Pfam PF01883 Iron-sulfur cluster assembly protein 12 88 2.5E-14 T 14-10-2018 IPR002744 MIP18 family-like ABED_0562 90580cf3f080b16e6fdd92741494baa0 117 Gene3D G3DSA:3.30.300.130 4 111 2.2E-33 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABED_0562 90580cf3f080b16e6fdd92741494baa0 117 SUPERFAMILY SSF117916 11 109 1.86E-26 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABED_0533 d1818b145f16454a5dad20c2a1ca6891 325 Pfam PF01758 Sodium Bile acid symporter family 44 217 3.5E-15 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ABED_0533 d1818b145f16454a5dad20c2a1ca6891 325 Gene3D G3DSA:1.20.1530.20 2 316 2.7E-30 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily ABED_1873 492fbd44cd805242f4feeef5df115f28 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 93 104 2.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ABED_1873 492fbd44cd805242f4feeef5df115f28 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 136 2.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ABED_1873 492fbd44cd805242f4feeef5df115f28 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 112 124 2.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ABED_1873 492fbd44cd805242f4feeef5df115f28 166 Gene3D G3DSA:2.102.10.10 39 151 2.4E-28 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABED_1873 492fbd44cd805242f4feeef5df115f28 166 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 28 2.0E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABED_1873 492fbd44cd805242f4feeef5df115f28 166 Pfam PF00355 Rieske [2Fe-2S] domain 51 137 2.3E-10 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABED_1873 492fbd44cd805242f4feeef5df115f28 166 SUPERFAMILY SSF50022 29 154 1.85E-27 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABED_1272 172df03d963ed24eab278d488f47f190 330 Pfam PF13437 HlyD family secretion protein 205 316 3.4E-17 T 14-10-2018 ABED_1272 172df03d963ed24eab278d488f47f190 330 SUPERFAMILY SSF111369 151 323 9.29E-10 T 14-10-2018 ABED_1272 172df03d963ed24eab278d488f47f190 330 Gene3D G3DSA:1.10.287.470 76 205 5.1E-41 T 14-10-2018 ABED_1272 172df03d963ed24eab278d488f47f190 330 Gene3D G3DSA:2.40.30.170 33 326 5.1E-41 T 14-10-2018 ABED_1272 172df03d963ed24eab278d488f47f190 330 Gene3D G3DSA:2.40.50.100 42 239 5.1E-41 T 14-10-2018 ABED_1575 ab6e240f00057d6db64e2d23bf954391 441 PRINTS PR00606 Class ID cytochrome C signature 426 436 1.1E-7 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 ABED_1575 ab6e240f00057d6db64e2d23bf954391 441 PRINTS PR00606 Class ID cytochrome C signature 366 379 1.1E-7 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 ABED_1575 ab6e240f00057d6db64e2d23bf954391 441 PRINTS PR00606 Class ID cytochrome C signature 415 425 1.1E-7 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 ABED_1575 ab6e240f00057d6db64e2d23bf954391 441 Gene3D G3DSA:1.10.760.10 361 438 1.6E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1575 ab6e240f00057d6db64e2d23bf954391 441 SUPERFAMILY SSF46626 365 437 4.95E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1252 bd95b61f52d59c8b3306b26fd6af9eb5 165 Pfam PF14297 Domain of unknown function (DUF4373) 11 95 1.3E-16 T 14-10-2018 IPR025400 Domain of unknown function DUF4373 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 79 20.901 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 Pfam PF00366 Ribosomal protein S17 9 74 3.7E-27 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 PRINTS PR00973 Ribosomal protein S17 family signature 65 72 2.9E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 PRINTS PR00973 Ribosomal protein S17 family signature 55 65 2.9E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 PRINTS PR00973 Ribosomal protein S17 family signature 23 46 2.9E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 ProSitePatterns PS00056 Ribosomal protein S17 signature. 55 67 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 Gene3D G3DSA:2.40.50.140 2 83 1.4E-27 T 14-10-2018 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 SUPERFAMILY SSF50249 4 80 6.43E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 4 74 6.0E-30 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0708 30c86e6a192a32b0f5a0e302e4eaad81 83 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 4 72 1.0E-26 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_1725 83c30e0d5e29093543c059d2658f7198 340 Gene3D G3DSA:3.40.50.2000 159 311 2.9E-72 T 14-10-2018 ABED_1725 83c30e0d5e29093543c059d2658f7198 340 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 175 311 3.2E-33 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ABED_1725 83c30e0d5e29093543c059d2658f7198 340 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 145 7.1E-22 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1725 83c30e0d5e29093543c059d2658f7198 340 SUPERFAMILY SSF53756 4 338 8.37E-75 T 14-10-2018 ABED_1725 83c30e0d5e29093543c059d2658f7198 340 Gene3D G3DSA:3.40.50.2000 6 158 2.9E-72 T 14-10-2018 ABED_1725 83c30e0d5e29093543c059d2658f7198 340 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 338 24.716 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_0559 093b7d09d5b9c667217ca4d23816cb3a 292 SUPERFAMILY SSF103481 47 143 9.42E-11 T 14-10-2018 ABED_0559 093b7d09d5b9c667217ca4d23816cb3a 292 SUPERFAMILY SSF103481 189 288 2.62E-11 T 14-10-2018 ABED_0559 093b7d09d5b9c667217ca4d23816cb3a 292 Pfam PF00892 EamA-like transporter family 154 285 8.1E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_0559 093b7d09d5b9c667217ca4d23816cb3a 292 Pfam PF00892 EamA-like transporter family 11 140 3.3E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_1516 2589af82e06bd37888b839564d05b02d 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 182 1.6E-26 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABED_1516 2589af82e06bd37888b839564d05b02d 204 SUPERFAMILY SSF56529 12 188 2.75E-45 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABED_1516 2589af82e06bd37888b839564d05b02d 204 Gene3D G3DSA:3.90.850.10 7 204 2.9E-48 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABED_1646 c80469367fd94e85f4632166af9f1c38 294 SUPERFAMILY SSF53448 1 246 1.43E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_1646 c80469367fd94e85f4632166af9f1c38 294 Pfam PF00535 Glycosyl transferase family 2 29 113 6.5E-6 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABED_1646 c80469367fd94e85f4632166af9f1c38 294 Gene3D G3DSA:3.90.550.10 2 203 1.4E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0584 6e4a14753022ce5921d8a73132aabe09 365 Pfam PF01541 GIY-YIG catalytic domain 265 342 4.8E-14 T 14-10-2018 IPR000305 GIY-YIG endonuclease ABED_0584 6e4a14753022ce5921d8a73132aabe09 365 Gene3D G3DSA:3.40.1440.10 252 349 9.4E-6 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABED_0584 6e4a14753022ce5921d8a73132aabe09 365 SUPERFAMILY SSF82771 282 342 1.96E-6 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABED_0028 86f704f249ea6ec7912904cb9295bf94 112 Pfam PF01638 HxlR-like helix-turn-helix 24 111 1.7E-35 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type ABED_0028 86f704f249ea6ec7912904cb9295bf94 112 SUPERFAMILY SSF46785 13 109 2.68E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0028 86f704f249ea6ec7912904cb9295bf94 112 Gene3D G3DSA:1.10.10.10 1 112 1.2E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0175 2801d376d5aec47e819d312f33e44329 216 Gene3D G3DSA:1.20.120.1760 12 212 1.5E-27 T 14-10-2018 ABED_0175 2801d376d5aec47e819d312f33e44329 216 Pfam PF01066 CDP-alcohol phosphatidyltransferase 30 103 2.5E-7 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABED_2109 c443592a5ebce4d75006524c614c8aa5 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 273 2.7E-95 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ABED_2109 c443592a5ebce4d75006524c614c8aa5 286 Gene3D G3DSA:1.10.3720.10 18 278 3.2E-60 T 14-10-2018 IPR035906 MetI-like superfamily ABED_2109 c443592a5ebce4d75006524c614c8aa5 286 SUPERFAMILY SSF161098 16 269 3.55E-53 T 14-10-2018 IPR035906 MetI-like superfamily ABED_2109 c443592a5ebce4d75006524c614c8aa5 286 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 17 276 4.4E-121 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 ABED_2109 c443592a5ebce4d75006524c614c8aa5 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 270 2.8E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_0989 38902181f482926a01e3726f45812c8a 311 Pfam PF04773 FecR protein 118 199 4.8E-17 T 14-10-2018 IPR006860 FecR protein ABED_0989 38902181f482926a01e3726f45812c8a 311 Gene3D G3DSA:2.60.120.1440 103 235 6.3E-24 T 14-10-2018 ABED_0989 38902181f482926a01e3726f45812c8a 311 Gene3D G3DSA:3.55.50.30 236 311 1.5E-8 T 14-10-2018 ABED_0989 38902181f482926a01e3726f45812c8a 311 Pfam PF16344 Domain of unknown function (DUF4974) 210 305 6.2E-12 T 14-10-2018 IPR032508 Protein FecR, C-terminal ABED_0989 38902181f482926a01e3726f45812c8a 311 PIRSF PIRSF018266 1 310 2.5E-55 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ABED_0773 cbd5b712886198722d2bcda2b897392c 263 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 255 4.1E-89 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ABED_0773 cbd5b712886198722d2bcda2b897392c 263 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 72 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 ABED_0773 cbd5b712886198722d2bcda2b897392c 263 Gene3D G3DSA:3.20.20.70 1 261 2.4E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0773 cbd5b712886198722d2bcda2b897392c 263 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 33 256 31.208 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ABED_0773 cbd5b712886198722d2bcda2b897392c 263 SUPERFAMILY SSF51366 11 259 4.94E-82 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABED_0773 cbd5b712886198722d2bcda2b897392c 263 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 260 33.007 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ABED_2127 659e3b0c9477f6c059175e220abb3e71 310 SUPERFAMILY SSF53187 26 298 3.65E-17 T 14-10-2018 ABED_2127 659e3b0c9477f6c059175e220abb3e71 310 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 52 251 8.2E-12 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ABED_2127 659e3b0c9477f6c059175e220abb3e71 310 Gene3D G3DSA:3.40.630.10 2 309 2.5E-40 T 14-10-2018 ABED_0934 1e025d1c761b3f9df52a310fd85f1f1a 121 Gene3D G3DSA:2.30.110.10 1 121 1.6E-35 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABED_0934 1e025d1c761b3f9df52a310fd85f1f1a 121 SUPERFAMILY SSF50475 3 120 7.5E-16 T 14-10-2018 ABED_0920 2f76eb5ebded3e8fab2fc6f250debda7 194 Gene3D G3DSA:3.20.20.140 1 192 3.4E-64 T 14-10-2018 ABED_0920 2f76eb5ebded3e8fab2fc6f250debda7 194 PIRSF PIRSF005902 3 192 5.8E-59 T 14-10-2018 IPR001130 TatD family GO:0016788 ABED_0920 2f76eb5ebded3e8fab2fc6f250debda7 194 SUPERFAMILY SSF51556 5 188 4.15E-58 T 14-10-2018 IPR032466 Metal-dependent hydrolase ABED_0920 2f76eb5ebded3e8fab2fc6f250debda7 194 Pfam PF01026 TatD related DNase 8 188 5.8E-52 T 14-10-2018 IPR001130 TatD family GO:0016788 ABED_1406 f3964f369789ba79714c4a4879f29550 364 Gene3D G3DSA:3.10.620.30 103 303 1.5E-18 T 14-10-2018 ABED_1406 f3964f369789ba79714c4a4879f29550 364 Pfam PF01841 Transglutaminase-like superfamily 155 277 4.5E-22 T 14-10-2018 IPR002931 Transglutaminase-like ABED_1406 f3964f369789ba79714c4a4879f29550 364 SMART SM00460 201 279 1.9E-12 T 14-10-2018 IPR002931 Transglutaminase-like ABED_1406 f3964f369789ba79714c4a4879f29550 364 SUPERFAMILY SSF54001 133 278 3.08E-23 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_0936 be2efe7db4ec6782899133ccc6308bb0 551 Gene3D G3DSA:1.20.1640.10 5 542 3.8E-65 T 14-10-2018 ABED_0936 be2efe7db4ec6782899133ccc6308bb0 551 Gene3D G3DSA:3.30.70.1430 50 157 3.8E-65 T 14-10-2018 ABED_0936 be2efe7db4ec6782899133ccc6308bb0 551 SUPERFAMILY SSF82866 348 543 5.89E-31 T 14-10-2018 ABED_0936 be2efe7db4ec6782899133ccc6308bb0 551 Gene3D G3DSA:3.30.70.1440 158 384 3.8E-65 T 14-10-2018 ABED_0936 be2efe7db4ec6782899133ccc6308bb0 551 Gene3D G3DSA:3.30.2090.10 210 307 3.8E-65 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABED_0936 be2efe7db4ec6782899133ccc6308bb0 551 SUPERFAMILY SSF82693 49 162 1.26E-6 T 14-10-2018 ABED_0936 be2efe7db4ec6782899133ccc6308bb0 551 Pfam PF00873 AcrB/AcrD/AcrF family 5 542 4.9E-40 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABED_0713 4c6f222f890f215a775ba40f8db188da 132 SUPERFAMILY SSF56047 1 132 8.63E-41 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0713 4c6f222f890f215a775ba40f8db188da 132 Gene3D G3DSA:3.30.1490.10 75 131 1.0E-23 T 14-10-2018 ABED_0713 4c6f222f890f215a775ba40f8db188da 132 Pfam PF00410 Ribosomal protein S8 4 132 1.0E-43 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0713 4c6f222f890f215a775ba40f8db188da 132 Gene3D G3DSA:3.30.1370.30 1 74 5.1E-20 T 14-10-2018 ABED_0713 4c6f222f890f215a775ba40f8db188da 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_0713 4c6f222f890f215a775ba40f8db188da 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 132 26.315 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABED_1316 af15121bb36c8ef20a5f5ca513afc82c 280 PIRSF PIRSF006483 1 280 1.9E-71 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT ABED_1316 af15121bb36c8ef20a5f5ca513afc82c 280 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 225 276 2.3E-14 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 ABED_1316 af15121bb36c8ef20a5f5ca513afc82c 280 Gene3D G3DSA:3.30.70.120 194 269 1.6E-13 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABED_1316 af15121bb36c8ef20a5f5ca513afc82c 280 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 216 1.7E-60 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT ABED_1770 03c805bb67fb1ccbdfbae8b2605ced30 241 Pfam PF02108 Flagellar assembly protein FliH 110 230 6.6E-16 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ABED_0102 3e85222bcceb8c11f6a72b03ab7929f1 370 Pfam PF02405 Permease MlaE 154 364 8.0E-69 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 ABED_0102 3e85222bcceb8c11f6a72b03ab7929f1 370 SUPERFAMILY SSF52091 10 79 4.12E-5 T 14-10-2018 IPR036513 STAS domain superfamily ABED_0102 3e85222bcceb8c11f6a72b03ab7929f1 370 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 107 369 3.1E-84 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ABED_1386 bed554f360bb7e4b45729c27a39a21a8 322 Gene3D G3DSA:3.20.20.70 14 319 8.1E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1386 bed554f360bb7e4b45729c27a39a21a8 322 SUPERFAMILY SSF51569 11 271 1.12E-41 T 14-10-2018 ABED_1386 bed554f360bb7e4b45729c27a39a21a8 322 Pfam PF00682 HMGL-like 15 259 1.7E-23 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABED_2003 a8eb3a3b393f8a0fcb5594859b5f0552 193 SUPERFAMILY SSF55811 4 112 6.5E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABED_2003 a8eb3a3b393f8a0fcb5594859b5f0552 193 Pfam PF00293 NUDIX domain 5 109 1.6E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABED_2003 a8eb3a3b393f8a0fcb5594859b5f0552 193 Gene3D G3DSA:3.90.79.10 1 139 3.2E-19 T 14-10-2018 ABED_2144 b470af2999762500b38c8cbc9f56faaf 133 Gene3D G3DSA:1.10.760.10 16 133 6.2E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_2144 b470af2999762500b38c8cbc9f56faaf 133 SUPERFAMILY SSF46626 32 132 2.66E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_2144 b470af2999762500b38c8cbc9f56faaf 133 Pfam PF09086 Domain of unknown function (DUF1924) 36 130 1.5E-37 T 14-10-2018 IPR015170 Protein of unknown function DUF1924 ABED_0803 c3cf9d788646cdac4843246066a8b464 198 Pfam PF11726 Inovirus Gp2 17 180 1.9E-14 T 14-10-2018 ABED_0827 4d73ca62a7886a398e684edeff7fa5be 419 Gene3D G3DSA:3.30.830.10 227 419 3.7E-51 T 14-10-2018 ABED_0827 4d73ca62a7886a398e684edeff7fa5be 419 Pfam PF05193 Peptidase M16 inactive domain 173 350 1.3E-33 T 14-10-2018 IPR007863 Peptidase M16, C-terminal ABED_0827 4d73ca62a7886a398e684edeff7fa5be 419 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 40 63 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 ABED_0827 4d73ca62a7886a398e684edeff7fa5be 419 SUPERFAMILY SSF63411 4 213 4.37E-60 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABED_0827 4d73ca62a7886a398e684edeff7fa5be 419 Pfam PF00675 Insulinase (Peptidase family M16) 20 135 1.3E-25 T 14-10-2018 IPR011765 Peptidase M16, N-terminal ABED_0827 4d73ca62a7886a398e684edeff7fa5be 419 SUPERFAMILY SSF63411 236 416 1.02E-34 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABED_0827 4d73ca62a7886a398e684edeff7fa5be 419 Gene3D G3DSA:3.30.830.10 2 225 1.1E-84 T 14-10-2018 ABED_1638 a0d75725b2129028f36a262928665729 419 Pfam PF04932 O-Antigen ligase 185 352 7.2E-15 T 14-10-2018 IPR007016 O-antigen ligase-related ABED_1735 b72814af4350e1b9c6a240b29ec2efe9 352 Pfam PF01575 MaoC like domain 15 129 7.3E-12 T 14-10-2018 IPR002539 MaoC-like dehydratase domain ABED_1735 b72814af4350e1b9c6a240b29ec2efe9 352 Gene3D G3DSA:3.10.129.10 1 348 5.8E-104 T 14-10-2018 ABED_1735 b72814af4350e1b9c6a240b29ec2efe9 352 SUPERFAMILY SSF54637 189 347 7.47E-30 T 14-10-2018 IPR029069 HotDog domain superfamily ABED_1735 b72814af4350e1b9c6a240b29ec2efe9 352 SUPERFAMILY SSF54637 3 152 1.05E-38 T 14-10-2018 IPR029069 HotDog domain superfamily ABED_1735 b72814af4350e1b9c6a240b29ec2efe9 352 PIRSF PIRSF021494 1 346 3.7E-106 T 14-10-2018 IPR016790 Thiol ester hydratase, Rv0216, predicted KEGG: 00630+4.2.1.148|KEGG: 00660+4.2.1.148|KEGG: 00720+4.2.1.148|MetaCyc: PWY-5741|MetaCyc: PWY-5744|MetaCyc: PWY-6728|MetaCyc: PWY-7854 ABED_0925 86af3a0263bdea544979c1fdfc0cbe66 180 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 7 160 3.0E-7 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related ABED_0817 947a2b018d8c3fb9879a584d97845cba 381 Pfam PF07804 HipA-like C-terminal domain 135 346 4.6E-43 T 14-10-2018 IPR012893 HipA-like, C-terminal ABED_0817 947a2b018d8c3fb9879a584d97845cba 381 Pfam PF13657 HipA N-terminal domain 4 98 1.8E-13 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 ABED_0817 947a2b018d8c3fb9879a584d97845cba 381 Gene3D G3DSA:1.10.1070.20 200 381 5.5E-6 T 14-10-2018 ABED_0817 947a2b018d8c3fb9879a584d97845cba 381 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 97 4.4E-10 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 SUPERFAMILY SSF118215 20 419 1.7E-93 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 Gene3D G3DSA:1.10.3860.10 6 437 3.8E-100 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 PRINTS PR00173 Glutamate-aspartate symporter signature 14 34 7.7E-22 T 14-10-2018 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 PRINTS PR00173 Glutamate-aspartate symporter signature 309 335 7.7E-22 T 14-10-2018 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 7.7E-22 T 14-10-2018 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 PRINTS PR00173 Glutamate-aspartate symporter signature 55 75 7.7E-22 T 14-10-2018 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 PRINTS PR00173 Glutamate-aspartate symporter signature 209 228 7.7E-22 T 14-10-2018 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 PRINTS PR00173 Glutamate-aspartate symporter signature 344 363 7.7E-22 T 14-10-2018 ABED_0172 5e9fd75ae947316b1394950af53da1ec 448 Pfam PF00375 Sodium:dicarboxylate symporter family 20 417 3.1E-87 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABED_1453 6541a0889477cbbb22929a1ebddb4064 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.4E-11 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABED_1453 6541a0889477cbbb22929a1ebddb4064 106 Gene3D G3DSA:3.30.70.100 1 94 2.3E-24 T 14-10-2018 ABED_1453 6541a0889477cbbb22929a1ebddb4064 106 SUPERFAMILY SSF54909 1 99 3.84E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel ABED_1399 834606d89b2b713d2dc03bd1921786c8 557 SUPERFAMILY SSF54862 197 523 6.54E-24 T 14-10-2018 ABED_1399 834606d89b2b713d2dc03bd1921786c8 557 Gene3D G3DSA:3.30.70.20 422 476 8.4E-8 T 14-10-2018 ABED_1399 834606d89b2b713d2dc03bd1921786c8 557 Gene3D G3DSA:3.30.70.20 207 277 8.5E-11 T 14-10-2018 ABED_1399 834606d89b2b713d2dc03bd1921786c8 557 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 460 471 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1399 834606d89b2b713d2dc03bd1921786c8 557 Pfam PF00037 4Fe-4S binding domain 454 472 9.4E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1399 834606d89b2b713d2dc03bd1921786c8 557 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 244 255 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABED_1399 834606d89b2b713d2dc03bd1921786c8 557 Pfam PF13187 4Fe-4S dicluster domain 215 257 1.4E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABED_1980 a08f9ce0bff0f8f8b79515054b8516bc 468 PIRSF PIRSF002457 1 468 7.6E-131 T 14-10-2018 IPR030676 Citrate carrier CitT-related ABED_1980 a08f9ce0bff0f8f8b79515054b8516bc 468 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 22 467 4.4E-139 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 ABED_1980 a08f9ce0bff0f8f8b79515054b8516bc 468 Pfam PF00939 Sodium:sulfate symporter transmembrane region 3 463 1.3E-141 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 ABED_1110 491f9656efcaa9e12389a8eef98e13b9 725 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 4 713 13.647 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 ABED_2013 1c4086e1f3dbcc95aea43e3ead4d7984 222 Pfam PF08722 TnsA endonuclease N terminal 52 130 7.4E-6 T 14-10-2018 IPR014833 TnsA endonuclease, N-terminal ABED_0211 d27a922be70996a8718ac23dc1f6227e 96 Gene3D G3DSA:1.10.20.60 1 94 4.0E-23 T 14-10-2018 ABED_0211 d27a922be70996a8718ac23dc1f6227e 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 96 2.0E-24 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABED_0211 d27a922be70996a8718ac23dc1f6227e 96 SUPERFAMILY SSF141000 3 94 4.84E-22 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 ABED_0211 d27a922be70996a8718ac23dc1f6227e 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 96 19.805 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABED_0211 d27a922be70996a8718ac23dc1f6227e 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 2.4E-17 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABED_0447 a9605c2f9f23ab132367480d6c63bd2a 619 Pfam PF00990 Diguanylate cyclase, GGDEF domain 447 602 1.3E-45 T 14-10-2018 IPR000160 GGDEF domain ABED_0447 a9605c2f9f23ab132367480d6c63bd2a 619 Gene3D G3DSA:3.30.450.290 36 174 3.5E-6 T 14-10-2018 ABED_0447 a9605c2f9f23ab132367480d6c63bd2a 619 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 444 604 1.5E-45 T 14-10-2018 IPR000160 GGDEF domain ABED_0447 a9605c2f9f23ab132367480d6c63bd2a 619 SUPERFAMILY SSF55073 450 608 3.22E-46 T 14-10-2018 IPR029787 Nucleotide cyclase ABED_0447 a9605c2f9f23ab132367480d6c63bd2a 619 Gene3D G3DSA:3.30.70.270 439 611 1.4E-52 T 14-10-2018 ABED_0447 a9605c2f9f23ab132367480d6c63bd2a 619 SMART SM00267 434 606 2.4E-53 T 14-10-2018 IPR000160 GGDEF domain ABED_1392 71ff3159ed09f82cbdd24c117d2162c9 277 Gene3D G3DSA:3.40.140.10 131 277 1.7E-44 T 14-10-2018 ABED_1392 71ff3159ed09f82cbdd24c117d2162c9 277 Pfam PF02634 FdhD/NarQ family 43 274 4.4E-67 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABED_1392 71ff3159ed09f82cbdd24c117d2162c9 277 PIRSF PIRSF015626 9 277 1.5E-75 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABED_1392 71ff3159ed09f82cbdd24c117d2162c9 277 Gene3D G3DSA:3.10.20.10 45 127 2.2E-7 T 14-10-2018 ABED_1392 71ff3159ed09f82cbdd24c117d2162c9 277 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 275 26.291 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABED_1392 71ff3159ed09f82cbdd24c117d2162c9 277 SUPERFAMILY SSF53927 22 274 2.5E-66 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABED_1392 71ff3159ed09f82cbdd24c117d2162c9 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 274 3.2E-54 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABED_1918 f28a85bbecc3ca0485bbbc9962c2d85a 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 208 1.5E-46 T 14-10-2018 ABED_1918 f28a85bbecc3ca0485bbbc9962c2d85a 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 222 4.2E-96 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1918 f28a85bbecc3ca0485bbbc9962c2d85a 223 Gene3D G3DSA:3.40.50.880 1 223 5.6E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_1918 f28a85bbecc3ca0485bbbc9962c2d85a 223 PIRSF PIRSF001586 1 223 4.5E-85 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1918 f28a85bbecc3ca0485bbbc9962c2d85a 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 223 42.432 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABED_1918 f28a85bbecc3ca0485bbbc9962c2d85a 223 SMART SM01211 1 221 5.7E-116 T 14-10-2018 ABED_1918 f28a85bbecc3ca0485bbbc9962c2d85a 223 SUPERFAMILY SSF52317 1 222 1.36E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like ABED_0546 f43893ddd108b7007874fa8497d4b889 217 Pfam PF13525 Outer membrane lipoprotein 37 184 3.2E-17 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like ABED_0546 f43893ddd108b7007874fa8497d4b889 217 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 10 183 1.4E-23 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD ABED_0546 f43893ddd108b7007874fa8497d4b889 217 Gene3D G3DSA:1.25.40.10 36 198 1.8E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0732 855151c489617031db2cb83fb8f1b9cf 375 SUPERFAMILY SSF56796 1 373 5.1E-100 T 14-10-2018 ABED_0732 855151c489617031db2cb83fb8f1b9cf 375 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 361 2.0E-91 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ABED_0732 855151c489617031db2cb83fb8f1b9cf 375 Gene3D G3DSA:1.20.1090.10 186 374 5.1E-40 T 14-10-2018 ABED_0732 855151c489617031db2cb83fb8f1b9cf 375 Gene3D G3DSA:3.40.50.1970 1 184 1.5E-51 T 14-10-2018 ABED_1205 39c8c9a3f2fc0fa9d3f70f6cb42ba459 307 Pfam PF08761 dUTPase 87 262 1.8E-32 T 14-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 ABED_1205 39c8c9a3f2fc0fa9d3f70f6cb42ba459 307 SUPERFAMILY SSF101386 87 305 1.7E-56 T 14-10-2018 ABED_1205 39c8c9a3f2fc0fa9d3f70f6cb42ba459 307 Gene3D G3DSA:1.10.4010.10 83 306 6.6E-74 T 14-10-2018 ABED_2097 21c6e0142949475ef7351da9135fa7f5 127 Pfam PF03883 Peroxide stress protein YaaA 1 123 2.5E-20 T 14-10-2018 IPR005583 Peroxide stress protein YaaA ABED_1631 e38e3c012c7cdd9788cdf68954f65eac 353 Gene3D G3DSA:3.20.20.80 151 350 2.0E-12 T 14-10-2018 ABED_1631 e38e3c012c7cdd9788cdf68954f65eac 353 SUPERFAMILY SSF51445 78 352 7.24E-19 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily ABED_2113 6c0373802cbc81f49bb48e8a9f6f2fd1 89 SUPERFAMILY SSF54285 1 87 2.18E-18 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABED_2113 6c0373802cbc81f49bb48e8a9f6f2fd1 89 Gene3D G3DSA:3.10.20.30 2 88 1.5E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily ABED_2113 6c0373802cbc81f49bb48e8a9f6f2fd1 89 Pfam PF02597 ThiS family 7 87 6.0E-7 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ABED_1839 a79654135bfbf6756366049d0cdeed65 443 Gene3D G3DSA:2.40.160.10 207 443 3.5E-10 T 14-10-2018 IPR023614 Porin domain superfamily ABED_1839 a79654135bfbf6756366049d0cdeed65 443 SUPERFAMILY SSF56935 27 443 1.46E-10 T 14-10-2018 ABED_1839 a79654135bfbf6756366049d0cdeed65 443 Pfam PF05538 Campylobacter major outer membrane protein 3 443 1.6E-37 T 14-10-2018 IPR008439 Campylobacter major outer membrane ABED_1104 3339b5bf5e04477d5bbdff707ac70852 180 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 2.0E-18 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ABED_1104 3339b5bf5e04477d5bbdff707ac70852 180 Gene3D G3DSA:3.30.160.100 1 111 1.3E-20 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like ABED_1104 3339b5bf5e04477d5bbdff707ac70852 180 SUPERFAMILY SSF69754 1 106 1.7E-20 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like ABED_1104 3339b5bf5e04477d5bbdff707ac70852 180 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 4.1E-18 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ABED_1104 3339b5bf5e04477d5bbdff707ac70852 180 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 125 179 2.1E-9 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal ABED_0749 d8f377b04872faf0796fef3ecdd2ae44 262 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 6 260 4.9E-80 T 14-10-2018 ABED_0749 d8f377b04872faf0796fef3ecdd2ae44 262 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 6 260 5.0E-80 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ABED_0749 d8f377b04872faf0796fef3ecdd2ae44 262 SUPERFAMILY SSF56219 6 261 1.31E-69 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABED_0749 d8f377b04872faf0796fef3ecdd2ae44 262 Gene3D G3DSA:3.60.10.10 1 261 1.2E-79 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABED_0749 d8f377b04872faf0796fef3ecdd2ae44 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 9 253 2.2E-17 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ABED_1939 97420e910c54dc75b1b86775671e7ae6 193 SUPERFAMILY SSF54001 72 192 1.13E-36 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_1939 97420e910c54dc75b1b86775671e7ae6 193 Pfam PF00877 NlpC/P60 family 87 189 3.6E-28 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABED_1939 97420e910c54dc75b1b86775671e7ae6 193 Gene3D G3DSA:3.90.1720.10 72 193 2.3E-38 T 14-10-2018 ABED_1019 1e0febf65bf314d1098c4be2fcba716b 392 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 11 391 1.6E-119 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain ABED_1019 1e0febf65bf314d1098c4be2fcba716b 392 SUPERFAMILY SSF56059 12 390 3.35E-60 T 14-10-2018 ABED_1019 1e0febf65bf314d1098c4be2fcba716b 392 Gene3D G3DSA:3.30.1490.330 273 351 1.4E-21 T 14-10-2018 ABED_1019 1e0febf65bf314d1098c4be2fcba716b 392 SUPERFAMILY SSF52440 180 289 2.13E-16 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABED_0558 2b4e5e719895da1a473c0f53f56db296 74 Pfam PF11391 Protein of unknown function (DUF2798) 13 70 3.8E-20 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 ABED_1681 f031231b6a88a7e5f5542a9adb8423a3 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 228 2.1E-42 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_1681 f031231b6a88a7e5f5542a9adb8423a3 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 228 4.2E-60 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_1681 f031231b6a88a7e5f5542a9adb8423a3 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 60 73 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_1681 f031231b6a88a7e5f5542a9adb8423a3 232 SMART SM00934 6 228 4.3E-73 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABED_1681 f031231b6a88a7e5f5542a9adb8423a3 232 Gene3D G3DSA:3.20.20.70 4 232 1.8E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1681 f031231b6a88a7e5f5542a9adb8423a3 232 SUPERFAMILY SSF51366 4 232 8.84E-58 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABED_0098 3deb5bef3a8ca9b4355eb7d580f9361d 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 190 340 3.9E-30 T 14-10-2018 IPR017516 AbrB duplication ABED_0098 3deb5bef3a8ca9b4355eb7d580f9361d 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 8 163 4.8E-36 T 14-10-2018 IPR017516 AbrB duplication ABED_0098 3deb5bef3a8ca9b4355eb7d580f9361d 348 Pfam PF05145 Transition state regulatory protein AbrB 30 342 2.9E-83 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 ABED_0098 3deb5bef3a8ca9b4355eb7d580f9361d 348 PIRSF PIRSF038991 1 348 1.5E-110 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 ABED_1742 470b8d85f7a3f70fef35ccd5ab242519 78 SUPERFAMILY SSF52833 1 72 2.52E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1742 470b8d85f7a3f70fef35ccd5ab242519 78 Gene3D G3DSA:3.40.30.10 1 75 1.2E-27 T 14-10-2018 ABED_1742 470b8d85f7a3f70fef35ccd5ab242519 78 PIRSF PIRSF037031 1 76 8.1E-31 T 14-10-2018 IPR005243 Redox-active disulphide protein 2 ABED_1742 470b8d85f7a3f70fef35ccd5ab242519 78 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 72 6.6E-22 T 14-10-2018 IPR005243 Redox-active disulphide protein 2 ABED_1742 470b8d85f7a3f70fef35ccd5ab242519 78 Pfam PF13192 Thioredoxin domain 1 72 5.0E-25 T 14-10-2018 IPR012336 Thioredoxin-like fold ABED_1452 7967b4936465a097ca125d70b913374f 357 SUPERFAMILY SSF48371 27 235 1.77E-46 T 14-10-2018 IPR016024 Armadillo-type fold ABED_1452 7967b4936465a097ca125d70b913374f 357 Pfam PF08713 DNA alkylation repair enzyme 112 215 1.6E-11 T 14-10-2018 IPR014825 DNA alkylation repair enzyme ABED_1452 7967b4936465a097ca125d70b913374f 357 Gene3D G3DSA:1.25.40.290 117 235 5.6E-37 T 14-10-2018 ABED_0264 949f78bf6a69cf424a942fa5f726ae54 180 SUPERFAMILY SSF52499 2 180 1.96E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABED_0264 949f78bf6a69cf424a942fa5f726ae54 180 Pfam PF00857 Isochorismatase family 9 157 2.1E-29 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABED_0264 949f78bf6a69cf424a942fa5f726ae54 180 Gene3D G3DSA:3.40.50.850 1 180 1.2E-52 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABED_0878 b805a651dad3f5ee3ed19dee1bf1195a 395 Pfam PF04773 FecR protein 50 146 2.7E-14 T 14-10-2018 IPR006860 FecR protein ABED_1505 4023c1ce0970a849d0db35a9aca1258a 291 SMART SM01245 3 54 2.9E-19 T 14-10-2018 IPR032782 Jag, N-terminal ABED_1505 4023c1ce0970a849d0db35a9aca1258a 291 Gene3D G3DSA:3.30.300.20 138 217 4.3E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta ABED_1505 4023c1ce0970a849d0db35a9aca1258a 291 Pfam PF14804 Jag N-terminus 4 52 5.4E-14 T 14-10-2018 IPR032782 Jag, N-terminal ABED_1505 4023c1ce0970a849d0db35a9aca1258a 291 Gene3D G3DSA:3.30.30.80 2 54 1.7E-10 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily ABED_1505 4023c1ce0970a849d0db35a9aca1258a 291 Gene3D G3DSA:3.30.1370.180 218 289 3.7E-33 T 14-10-2018 ABED_0656 624cf9174e5a16dd0afe0cd57f01480b 404 Pfam PF02321 Outer membrane efflux protein 14 199 3.1E-6 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0656 624cf9174e5a16dd0afe0cd57f01480b 404 Pfam PF02321 Outer membrane efflux protein 221 399 1.6E-15 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0656 624cf9174e5a16dd0afe0cd57f01480b 404 Gene3D G3DSA:1.20.1600.10 12 402 5.9E-27 T 14-10-2018 ABED_0656 624cf9174e5a16dd0afe0cd57f01480b 404 SUPERFAMILY SSF56954 43 400 3.27E-28 T 14-10-2018 ABED_1016 b976a0c52db367475cea2d818eeae8e2 158 Pfam PF03061 Thioesterase superfamily 27 100 3.7E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABED_1016 b976a0c52db367475cea2d818eeae8e2 158 SUPERFAMILY SSF54637 8 152 9.86E-42 T 14-10-2018 IPR029069 HotDog domain superfamily ABED_1016 b976a0c52db367475cea2d818eeae8e2 158 Gene3D G3DSA:3.10.129.10 3 157 4.6E-53 T 14-10-2018 ABED_0405 77413c3b76ac84029a7c4d9ae35123ea 286 Gene3D G3DSA:1.10.600.10 2 286 4.0E-89 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABED_0405 77413c3b76ac84029a7c4d9ae35123ea 286 SUPERFAMILY SSF48576 3 269 1.4E-70 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABED_0405 77413c3b76ac84029a7c4d9ae35123ea 286 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 76 92 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABED_0405 77413c3b76ac84029a7c4d9ae35123ea 286 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABED_0405 77413c3b76ac84029a7c4d9ae35123ea 286 Pfam PF00348 Polyprenyl synthetase 24 262 4.3E-49 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ABED_1829 bfb701ec2c9274e563da6d5bf5b4f4dd 370 Gene3D G3DSA:3.90.1150.10 6 367 5.3E-98 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1829 bfb701ec2c9274e563da6d5bf5b4f4dd 370 Pfam PF00155 Aminotransferase class I and II 32 360 4.6E-35 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABED_1829 bfb701ec2c9274e563da6d5bf5b4f4dd 370 SUPERFAMILY SSF53383 6 370 2.02E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_1829 bfb701ec2c9274e563da6d5bf5b4f4dd 370 Gene3D G3DSA:3.40.640.10 52 266 5.3E-98 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_2048 b9a7845e89227d784fa76ed5f19765a3 236 Pfam PF11741 AMIN domain 150 224 1.5E-9 T 14-10-2018 IPR021731 AMIN domain ABED_0609 dfdb9f883a74715f525008611eee5e68 342 Pfam PF05036 Sporulation related domain 266 340 1.8E-7 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 ABED_0609 dfdb9f883a74715f525008611eee5e68 342 Gene3D G3DSA:3.30.70.1070 268 341 4.7E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABED_0609 dfdb9f883a74715f525008611eee5e68 342 SUPERFAMILY SSF110997 266 340 1.96E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABED_1702 08cb1dc1816cf3213440047d2d9417b6 95 SUPERFAMILY SSF54909 1 83 1.9E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel ABED_1702 08cb1dc1816cf3213440047d2d9417b6 95 Pfam PF03795 YCII-related domain 1 79 2.8E-13 T 14-10-2018 IPR005545 YCII-related ABED_1702 08cb1dc1816cf3213440047d2d9417b6 95 Gene3D G3DSA:3.30.70.1060 1 91 4.5E-23 T 14-10-2018 ABED_1014 0c21f3adacc36455e2d8cd464574fc5e 497 SUPERFAMILY SSF52058 54 175 7.31E-5 T 14-10-2018 ABED_1014 0c21f3adacc36455e2d8cd464574fc5e 497 Gene3D G3DSA:3.80.10.10 29 208 5.2E-17 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily ABED_1447 b8355593734cab35c9c0964a6a8b85ea 160 SUPERFAMILY SSF56925 25 158 2.3E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ABED_1447 b8355593734cab35c9c0964a6a8b85ea 160 Gene3D G3DSA:2.40.160.20 23 160 6.1E-6 T 14-10-2018 ABED_1447 b8355593734cab35c9c0964a6a8b85ea 160 Pfam PF10082 Putative beta-barrel porin 2 65 157 3.9E-8 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 ABED_1499 1a942b90a5201383f50efa55290cf037 250 Gene3D G3DSA:3.30.1380.10 89 242 4.6E-17 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABED_1499 1a942b90a5201383f50efa55290cf037 250 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 177 243 4.6E-21 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 ABED_1499 1a942b90a5201383f50efa55290cf037 250 SUPERFAMILY SSF55166 163 246 3.14E-22 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABED_1029 d109f17eda558a64344f1de089bb62ed 587 Pfam PF02690 Na+/Pi-cotransporter 33 172 1.5E-37 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 ABED_1029 d109f17eda558a64344f1de089bb62ed 587 Pfam PF02690 Na+/Pi-cotransporter 198 281 6.2E-12 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 ABED_0023 7d057fe5933a048a22088b411fd10d9d 137 SUPERFAMILY SSF54637 3 128 1.69E-31 T 14-10-2018 IPR029069 HotDog domain superfamily ABED_0023 7d057fe5933a048a22088b411fd10d9d 137 Gene3D G3DSA:3.10.129.10 3 132 2.7E-29 T 14-10-2018 ABED_0023 7d057fe5933a048a22088b411fd10d9d 137 Pfam PF13279 Thioesterase-like superfamily 10 123 7.1E-13 T 14-10-2018 ABED_0315 46f2cf0b503b2cdb6092704a446b2fb4 309 Gene3D G3DSA:1.10.10.60 205 309 2.4E-20 T 14-10-2018 ABED_0315 46f2cf0b503b2cdb6092704a446b2fb4 309 SUPERFAMILY SSF46689 209 256 2.64E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0315 46f2cf0b503b2cdb6092704a446b2fb4 309 Pfam PF12833 Helix-turn-helix domain 230 308 2.9E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_0315 46f2cf0b503b2cdb6092704a446b2fb4 309 SUPERFAMILY SSF46689 261 308 1.12E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_0315 46f2cf0b503b2cdb6092704a446b2fb4 309 SMART SM00342 224 307 2.5E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABED_1889 0f8bc4b5e09929af659cdf43b7cafad8 254 Gene3D G3DSA:3.30.70.890 162 254 1.2E-5 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABED_1889 0f8bc4b5e09929af659cdf43b7cafad8 254 Gene3D G3DSA:3.30.230.10 1 158 9.7E-45 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABED_1889 0f8bc4b5e09929af659cdf43b7cafad8 254 Pfam PF00288 GHMP kinases N terminal domain 86 141 2.0E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ABED_1889 0f8bc4b5e09929af659cdf43b7cafad8 254 SUPERFAMILY SSF54211 2 156 5.01E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABED_1889 0f8bc4b5e09929af659cdf43b7cafad8 254 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 250 1.7E-51 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ABED_1889 0f8bc4b5e09929af659cdf43b7cafad8 254 SUPERFAMILY SSF55060 167 251 4.32E-6 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABED_1889 0f8bc4b5e09929af659cdf43b7cafad8 254 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 253 20.261 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ABED_1889 0f8bc4b5e09929af659cdf43b7cafad8 254 PIRSF PIRSF010376 1 254 1.0E-60 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ABED_0445 9ad3fbaa3415d3698435b103adce0553 209 Gene3D G3DSA:3.40.50.200 1 193 1.3E-16 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABED_0445 9ad3fbaa3415d3698435b103adce0553 209 SUPERFAMILY SSF52743 3 144 1.22E-17 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABED_0445 9ad3fbaa3415d3698435b103adce0553 209 Pfam PF00082 Subtilase family 55 141 2.1E-5 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABED_0946 187ef8e467aa5b7ee972f54098834b86 220 SUPERFAMILY SSF52540 1 219 2.99E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0946 187ef8e467aa5b7ee972f54098834b86 220 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABED_0946 187ef8e467aa5b7ee972f54098834b86 220 Pfam PF00005 ABC transporter 20 165 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABED_0946 187ef8e467aa5b7ee972f54098834b86 220 SMART SM00382 27 216 7.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_0946 187ef8e467aa5b7ee972f54098834b86 220 Gene3D G3DSA:3.40.50.300 1 202 5.0E-54 T 14-10-2018 ABED_1078 fef34ff5a27505263cff99aea50f815b 174 Gene3D G3DSA:3.40.50.1240 2 174 8.7E-18 T 14-10-2018 IPR029033 Histidine phosphatase superfamily ABED_1078 fef34ff5a27505263cff99aea50f815b 174 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 46 172 1.1E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABED_1078 fef34ff5a27505263cff99aea50f815b 174 SUPERFAMILY SSF53254 43 172 1.2E-18 T 14-10-2018 IPR029033 Histidine phosphatase superfamily ABED_1652 12a8f99fdd6062ab6aa94864ef009e44 338 Gene3D G3DSA:3.40.50.2000 1 148 3.9E-12 T 14-10-2018 ABED_1652 12a8f99fdd6062ab6aa94864ef009e44 338 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 161 307 4.0E-19 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 ABED_1652 12a8f99fdd6062ab6aa94864ef009e44 338 SUPERFAMILY SSF53756 6 331 3.56E-46 T 14-10-2018 ABED_1652 12a8f99fdd6062ab6aa94864ef009e44 338 Gene3D G3DSA:3.40.50.2000 156 334 1.3E-29 T 14-10-2018 ABED_0036 0e8886519351062a88cb377516c64899 195 Pfam PF02589 LUD domain 93 193 1.7E-18 T 14-10-2018 IPR003741 LUD domain ABED_0036 0e8886519351062a88cb377516c64899 195 SUPERFAMILY SSF100950 31 193 4.6E-35 T 14-10-2018 IPR037171 NagB/RpiA transferase-like ABED_0036 0e8886519351062a88cb377516c64899 195 Gene3D G3DSA:3.40.50.10420 32 193 3.4E-26 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABED_1836 c60b4e7f96ea8c375ce0669e70390387 401 Gene3D G3DSA:3.40.50.1100 7 308 7.8E-115 T 14-10-2018 ABED_1836 c60b4e7f96ea8c375ce0669e70390387 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 303 2.8E-81 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABED_1836 c60b4e7f96ea8c375ce0669e70390387 401 Gene3D G3DSA:3.40.50.1100 50 146 7.8E-115 T 14-10-2018 ABED_1836 c60b4e7f96ea8c375ce0669e70390387 401 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 41 55 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABED_1836 c60b4e7f96ea8c375ce0669e70390387 401 SUPERFAMILY SSF53686 4 353 4.06E-99 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABED_1836 c60b4e7f96ea8c375ce0669e70390387 401 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 399 3.6E-151 T 14-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABED_0045 97e0eb15ded22551b1732cd4527c2287 595 Pfam PF00733 Asparagine synthase 231 590 2.5E-79 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 ABED_0045 97e0eb15ded22551b1732cd4527c2287 595 SUPERFAMILY SSF52402 211 551 3.26E-64 T 14-10-2018 ABED_0045 97e0eb15ded22551b1732cd4527c2287 595 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 529 3.4E-125 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ABED_0045 97e0eb15ded22551b1732cd4527c2287 595 SUPERFAMILY SSF56235 1 204 7.38E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_0045 97e0eb15ded22551b1732cd4527c2287 595 Pfam PF13537 Glutamine amidotransferase domain 41 155 1.9E-34 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABED_0045 97e0eb15ded22551b1732cd4527c2287 595 Gene3D G3DSA:3.60.20.10 5 178 8.0E-50 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABED_0045 97e0eb15ded22551b1732cd4527c2287 595 PIRSF PIRSF001589 1 594 1.4E-134 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ABED_0268 3d37f8ae9c40b0ade693fe3f264839a8 641 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 9 300 1.1E-120 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 ABED_0268 3d37f8ae9c40b0ade693fe3f264839a8 641 Pfam PF13177 DNA polymerase III, delta subunit 25 183 3.4E-44 T 14-10-2018 ABED_0268 3d37f8ae9c40b0ade693fe3f264839a8 641 Gene3D G3DSA:1.10.8.60 14 244 1.5E-99 T 14-10-2018 ABED_0268 3d37f8ae9c40b0ade693fe3f264839a8 641 SUPERFAMILY SSF52540 39 231 5.7E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0268 3d37f8ae9c40b0ade693fe3f264839a8 641 Gene3D G3DSA:3.40.50.300 18 182 1.5E-99 T 14-10-2018 ABED_0268 3d37f8ae9c40b0ade693fe3f264839a8 641 SMART SM00382 42 184 3.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_1251 7c9252d689b910fbae968053101018ed 263 SUPERFAMILY SSF52540 4 197 5.05E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1251 7c9252d689b910fbae968053101018ed 263 Gene3D G3DSA:3.40.50.300 9 261 4.3E-10 T 14-10-2018 ABED_0631 73c470d244be6d3d39cca15932e991dc 469 Pfam PF01943 Polysaccharide biosynthesis protein 8 239 5.0E-6 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ABED_1992 3c045a6a3c1beca0f957197631720ba4 263 Gene3D G3DSA:1.10.10.10 1 83 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1992 3c045a6a3c1beca0f957197631720ba4 263 SUPERFAMILY SSF46785 4 80 4.67E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1972 8ce8e06737c52c4c398bef372a565233 432 Gene3D G3DSA:3.40.50.720 4 148 2.7E-28 T 14-10-2018 ABED_1972 8ce8e06737c52c4c398bef372a565233 432 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 147 413 1.9E-6 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 ABED_1972 8ce8e06737c52c4c398bef372a565233 432 Gene3D G3DSA:3.30.360.10 149 311 2.7E-28 T 14-10-2018 ABED_1972 8ce8e06737c52c4c398bef372a565233 432 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 141 2.9E-6 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ABED_0895 d086bb86132c5999dc6d6da4e71ea07f 128 SUPERFAMILY SSF50814 25 113 3.79E-6 T 14-10-2018 IPR012674 Calycin ABED_0895 d086bb86132c5999dc6d6da4e71ea07f 128 Pfam PF17409 MoaF C-terminal domain 31 91 2.5E-7 T 14-10-2018 IPR035348 MoaF, C-terminal domain ABED_0895 d086bb86132c5999dc6d6da4e71ea07f 128 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 32 118 0.004 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 ABED_0895 d086bb86132c5999dc6d6da4e71ea07f 128 Gene3D G3DSA:2.40.128.20 21 126 1.4E-10 T 14-10-2018 IPR012674 Calycin ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 174 2.4E-52 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 SUPERFAMILY SSF50891 10 175 7.6E-63 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 3.3E-30 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 3.3E-30 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 3.3E-30 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 3.3E-30 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 3.3E-30 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 Gene3D G3DSA:2.40.100.10 14 176 1.0E-69 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily ABED_0402 199d882e3df3cb1a0d7fb4936c7afa5c 177 PIRSF PIRSF001467 10 177 6.3E-57 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ABED_1789 43539467ac97e24f36c1179a23a956f8 76 Gene3D G3DSA:3.40.30.10 1 76 1.7E-14 T 14-10-2018 ABED_1789 43539467ac97e24f36c1179a23a956f8 76 SUPERFAMILY SSF52833 2 73 4.16E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1789 43539467ac97e24f36c1179a23a956f8 76 Pfam PF00462 Glutaredoxin 4 60 5.1E-8 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ABED_2006 e9b7034da20f8972896d4568950ea7b5 198 Pfam PF06508 Queuosine biosynthesis protein QueC 4 194 2.0E-31 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABED_2006 e9b7034da20f8972896d4568950ea7b5 198 Gene3D G3DSA:3.40.50.620 2 196 6.6E-40 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_2006 e9b7034da20f8972896d4568950ea7b5 198 SUPERFAMILY SSF52402 4 196 2.65E-29 T 14-10-2018 ABED_0188 c689ce0976e708e97755ddb5f2c7c7cd 86 Pfam PF01313 Bacterial export proteins, family 3 3 74 7.6E-24 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABED_0188 c689ce0976e708e97755ddb5f2c7c7cd 86 PIRSF PIRSF004669 1 85 8.4E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABED_0188 c689ce0976e708e97755ddb5f2c7c7cd 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 15 36 1.4E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABED_0188 c689ce0976e708e97755ddb5f2c7c7cd 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 36 51 1.4E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABED_0188 c689ce0976e708e97755ddb5f2c7c7cd 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 51 73 1.4E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABED_0203 8f985db1d6d86238dfd44c75216251da 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 408 24.319 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ABED_0203 8f985db1d6d86238dfd44c75216251da 408 Pfam PF03616 Sodium/glutamate symporter 4 376 1.0E-138 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ABED_0203 8f985db1d6d86238dfd44c75216251da 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 407 3.4E-152 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ABED_2087 096919ece7022c192ccc2540827f7626 321 Gene3D G3DSA:3.30.460.20 6 129 1.1E-36 T 14-10-2018 ABED_2087 096919ece7022c192ccc2540827f7626 321 SUPERFAMILY SSF143865 9 254 4.45E-49 T 14-10-2018 ABED_2087 096919ece7022c192ccc2540827f7626 321 SUPERFAMILY SSF144083 256 319 2.09E-16 T 14-10-2018 ABED_2087 096919ece7022c192ccc2540827f7626 321 Gene3D G3DSA:1.20.58.340 134 256 3.3E-37 T 14-10-2018 ABED_2087 096919ece7022c192ccc2540827f7626 321 Pfam PF01544 CorA-like Mg2+ transporter protein 33 314 1.0E-58 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ABED_2087 096919ece7022c192ccc2540827f7626 321 Gene3D G3DSA:1.20.58.340 264 321 4.3E-14 T 14-10-2018 ABED_0422 c77dd68ed463623ce09a0cb66028aec8 203 Gene3D G3DSA:3.20.20.70 13 192 2.1E-25 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0422 c77dd68ed463623ce09a0cb66028aec8 203 Pfam PF02581 Thiamine monophosphate synthase 20 185 2.0E-22 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABED_0422 c77dd68ed463623ce09a0cb66028aec8 203 SUPERFAMILY SSF51391 19 200 1.83E-24 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABED_0625 544bf1cb0f9d750b371bee23fb06603a 386 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 6 354 1.2E-97 T 14-10-2018 IPR020022 N-acetyl sugar amidotransferase ABED_0625 544bf1cb0f9d750b371bee23fb06603a 386 Gene3D G3DSA:3.40.50.620 4 203 6.4E-11 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABED_0625 544bf1cb0f9d750b371bee23fb06603a 386 SUPERFAMILY SSF52402 18 186 1.19E-21 T 14-10-2018 ABED_0059 3532efe093853623fdcc0f004308c9a3 98 SMART SM00360 12 85 6.1E-28 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 ABED_0059 3532efe093853623fdcc0f004308c9a3 98 SUPERFAMILY SSF54928 12 96 2.96E-31 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 ABED_0059 3532efe093853623fdcc0f004308c9a3 98 Gene3D G3DSA:3.30.70.330 6 97 1.9E-31 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABED_0059 3532efe093853623fdcc0f004308c9a3 98 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 83 5.0E-22 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 ABED_1877 5feafd10817791fa81d0623af93f91d1 211 SUPERFAMILY SSF46626 113 208 1.83E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1877 5feafd10817791fa81d0623af93f91d1 211 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 129 202 4.2E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1877 5feafd10817791fa81d0623af93f91d1 211 Gene3D G3DSA:1.10.760.10 118 204 1.5E-7 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0928 f513db92b9c428aa91fb0d2591b6c963 153 Pfam PF00583 Acetyltransferase (GNAT) family 43 118 1.3E-10 T 14-10-2018 IPR000182 GNAT domain ABED_0928 f513db92b9c428aa91fb0d2591b6c963 153 SUPERFAMILY SSF55729 3 151 1.05E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0928 f513db92b9c428aa91fb0d2591b6c963 153 Gene3D G3DSA:3.40.630.30 3 136 3.9E-28 T 14-10-2018 ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 Gene3D G3DSA:1.10.10.160 107 190 2.5E-56 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 Gene3D G3DSA:1.10.486.10 372 415 2.0E-23 T 14-10-2018 ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 Gene3D G3DSA:3.40.50.300 579 670 3.2E-34 T 14-10-2018 ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 Gene3D G3DSA:3.40.50.300 273 371 2.0E-23 T 14-10-2018 ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 Gene3D G3DSA:1.10.486.10 478 578 3.2E-34 T 14-10-2018 ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 Gene3D G3DSA:3.40.50.300 6 264 2.5E-56 T 14-10-2018 ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 Pfam PF13361 UvrD-like helicase C-terminal domain 270 653 1.5E-46 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 Pfam PF13245 AAA domain 10 249 1.2E-29 T 14-10-2018 ABED_0535 eaa7a3aee684a4fee3ca0f9c66591af7 681 SUPERFAMILY SSF52540 3 670 8.28E-109 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0806 951bfa1661ab94b1ff765cffd93ec43e 203 SUPERFAMILY SSF140931 40 202 2.09E-30 T 14-10-2018 IPR036597 Fido-like domain superfamily ABED_0806 951bfa1661ab94b1ff765cffd93ec43e 203 Pfam PF02661 Fic/DOC family 57 158 1.2E-15 T 14-10-2018 IPR003812 Fido domain ABED_0806 951bfa1661ab94b1ff765cffd93ec43e 203 Gene3D G3DSA:1.10.3290.10 2 200 6.9E-52 T 14-10-2018 IPR036597 Fido-like domain superfamily ABED_1475 8e49b81674c0a0186cf7336a7a10d504 430 Gene3D G3DSA:2.120.10.30 168 430 1.4E-33 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABED_1475 8e49b81674c0a0186cf7336a7a10d504 430 SUPERFAMILY SSF69304 163 430 1.05E-28 T 14-10-2018 ABED_1475 8e49b81674c0a0186cf7336a7a10d504 430 Pfam PF07676 WD40-like Beta Propeller Repeat 251 271 0.14 T 14-10-2018 IPR011659 WD40-like Beta Propeller ABED_1475 8e49b81674c0a0186cf7336a7a10d504 430 Pfam PF07676 WD40-like Beta Propeller Repeat 376 398 0.22 T 14-10-2018 IPR011659 WD40-like Beta Propeller ABED_1696 e61da184521f617ec92584e6897a46e2 385 SUPERFAMILY SSF56954 48 357 1.7E-26 T 14-10-2018 ABED_1696 e61da184521f617ec92584e6897a46e2 385 Gene3D G3DSA:1.20.1600.10 30 362 8.1E-23 T 14-10-2018 ABED_1696 e61da184521f617ec92584e6897a46e2 385 Pfam PF02321 Outer membrane efflux protein 220 375 1.7E-11 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_1696 e61da184521f617ec92584e6897a46e2 385 Pfam PF02321 Outer membrane efflux protein 34 192 3.3E-8 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_1955 b1b1ecc5a05f9237140282dd674d5079 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 367 4.5E-76 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ABED_1955 b1b1ecc5a05f9237140282dd674d5079 378 Gene3D G3DSA:2.40.50.100 58 202 1.4E-91 T 14-10-2018 ABED_1955 b1b1ecc5a05f9237140282dd674d5079 378 SUPERFAMILY SSF111369 47 290 4.58E-71 T 14-10-2018 ABED_1955 b1b1ecc5a05f9237140282dd674d5079 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 285 3.2E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ABED_1955 b1b1ecc5a05f9237140282dd674d5079 378 Gene3D G3DSA:2.40.420.20 296 362 1.4E-91 T 14-10-2018 ABED_1955 b1b1ecc5a05f9237140282dd674d5079 378 Gene3D G3DSA:1.10.287.470 93 166 1.4E-91 T 14-10-2018 ABED_1955 b1b1ecc5a05f9237140282dd674d5079 378 Gene3D G3DSA:2.40.30.170 46 295 1.4E-91 T 14-10-2018 ABED_0033 d0f2bf97bda34bfd0974d677d72dde9a 546 Pfam PF02652 L-lactate permease 17 535 8.3E-211 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ABED_0033 d0f2bf97bda34bfd0974d677d72dde9a 546 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 539 2.4E-220 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ABED_1800 636a010ce9ad2eac566146a5bf711c16 381 SUPERFAMILY SSF103473 3 380 2.75E-52 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_1800 636a010ce9ad2eac566146a5bf711c16 381 Gene3D G3DSA:1.20.1250.20 5 194 1.2E-23 T 14-10-2018 ABED_1800 636a010ce9ad2eac566146a5bf711c16 381 Gene3D G3DSA:1.20.1250.20 195 380 2.7E-19 T 14-10-2018 ABED_1800 636a010ce9ad2eac566146a5bf711c16 381 Pfam PF07690 Major Facilitator Superfamily 8 344 2.0E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_0845 84d25ff0dada1348c1e81e297a72061f 197 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 8 194 9.1E-36 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ABED_0845 84d25ff0dada1348c1e81e297a72061f 197 Pfam PF03602 Conserved hypothetical protein 95 9 193 8.3E-35 T 14-10-2018 ABED_0845 84d25ff0dada1348c1e81e297a72061f 197 Gene3D G3DSA:3.40.50.150 2 197 8.3E-36 T 14-10-2018 ABED_0845 84d25ff0dada1348c1e81e297a72061f 197 PIRSF PIRSF004553 7 197 1.2E-38 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ABED_0845 84d25ff0dada1348c1e81e297a72061f 197 SUPERFAMILY SSF53335 8 194 5.65E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1032 dbc1139af960af8b8fff6cce45a30ba9 220 SMART SM00862 146 218 2.4E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1032 dbc1139af960af8b8fff6cce45a30ba9 220 Pfam PF00072 Response regulator receiver domain 4 113 1.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1032 dbc1139af960af8b8fff6cce45a30ba9 220 SMART SM00448 2 113 3.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1032 dbc1139af960af8b8fff6cce45a30ba9 220 Gene3D G3DSA:1.10.10.10 132 220 1.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1032 dbc1139af960af8b8fff6cce45a30ba9 220 SUPERFAMILY SSF52172 1 181 5.41E-34 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1032 dbc1139af960af8b8fff6cce45a30ba9 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 1.8E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1032 dbc1139af960af8b8fff6cce45a30ba9 220 Gene3D G3DSA:3.40.50.2300 1 131 2.2E-32 T 14-10-2018 ABED_1802 a4f70de7017fc1d6c8afe1a73c8ba86c 322 PIRSF PIRSF027386 1 322 1.9E-97 T 14-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type ABED_1802 a4f70de7017fc1d6c8afe1a73c8ba86c 322 SUPERFAMILY SSF53850 23 259 1.13E-25 T 14-10-2018 ABED_1802 a4f70de7017fc1d6c8afe1a73c8ba86c 322 Gene3D G3DSA:3.40.190.10 120 322 7.9E-42 T 14-10-2018 ABED_1802 a4f70de7017fc1d6c8afe1a73c8ba86c 322 Gene3D G3DSA:3.40.190.10 16 119 6.3E-16 T 14-10-2018 ABED_0038 0c45311a722179dc5e2d8016ff80849e 249 Pfam PF02754 Cysteine-rich domain 4 83 4.0E-12 T 14-10-2018 IPR004017 Cysteine-rich domain ABED_0038 0c45311a722179dc5e2d8016ff80849e 249 Pfam PF02754 Cysteine-rich domain 130 225 2.4E-11 T 14-10-2018 IPR004017 Cysteine-rich domain ABED_0992 790dc39490109aee3b94213c9a83a50c 197 Gene3D G3DSA:2.60.120.10 6 147 4.8E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0992 790dc39490109aee3b94213c9a83a50c 197 Pfam PF00027 Cyclic nucleotide-binding domain 37 125 3.5E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain ABED_0992 790dc39490109aee3b94213c9a83a50c 197 SUPERFAMILY SSF51206 25 142 5.11E-24 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like ABED_0810 52c76335f4bf68202e4413dd0ca3aff6 237 Pfam PF01863 Protein of unknown function DUF45 28 232 6.2E-55 T 14-10-2018 IPR002725 Protein of unknown function DUF45 ABED_0810 52c76335f4bf68202e4413dd0ca3aff6 237 Gene3D G3DSA:3.30.2010.10 140 231 5.1E-15 T 14-10-2018 ABED_1773 2d7c74c0f59aa5b4a2475b8e524410a4 132 PIRSF PIRSF002889 2 129 7.3E-25 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ABED_1773 2d7c74c0f59aa5b4a2475b8e524410a4 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 7 126 3.5E-25 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ABED_1773 2d7c74c0f59aa5b4a2475b8e524410a4 132 Pfam PF00460 Flagella basal body rod protein 20 37 1.4E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABED_2016 70ac4ff5f568b501eadb3a0187b7e56b 389 Pfam PF06527 TniQ 18 157 5.7E-24 T 14-10-2018 IPR009492 TniQ ABED_0311 1793820891688a33ad5a6111ec46c293 387 Pfam PF07786 Protein of unknown function (DUF1624) 13 226 4.2E-17 T 14-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 ABED_1767 d64e38f7c2c90accb5ff1546f9aa4081 583 Pfam PF00460 Flagella basal body rod protein 5 35 1.9E-4 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABED_1767 d64e38f7c2c90accb5ff1546f9aa4081 583 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 261 5.5E-38 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABED_1767 d64e38f7c2c90accb5ff1546f9aa4081 583 SUPERFAMILY SSF117143 75 543 2.09E-31 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABED_1767 d64e38f7c2c90accb5ff1546f9aa4081 583 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 507 581 1.9E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABED_1566 ded3b8435b39c7aa053164f96b617214 221 Gene3D G3DSA:3.40.50.2300 1 129 1.0E-32 T 14-10-2018 ABED_1566 ded3b8435b39c7aa053164f96b617214 221 SMART SM00862 145 219 2.1E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1566 ded3b8435b39c7aa053164f96b617214 221 Pfam PF00072 Response regulator receiver domain 5 114 4.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1566 ded3b8435b39c7aa053164f96b617214 221 SMART SM00448 3 114 5.0E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1566 ded3b8435b39c7aa053164f96b617214 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 4.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_1566 ded3b8435b39c7aa053164f96b617214 221 SUPERFAMILY SSF52172 3 134 8.25E-34 T 14-10-2018 IPR011006 CheY-like superfamily ABED_1566 ded3b8435b39c7aa053164f96b617214 221 SUPERFAMILY SSF46894 133 219 3.68E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_1566 ded3b8435b39c7aa053164f96b617214 221 Gene3D G3DSA:1.10.10.10 130 221 4.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1580 f29f6558328ff2b726299c95b5b5ecb2 304 Gene3D G3DSA:3.40.50.1980 202 304 3.1E-38 T 14-10-2018 ABED_1580 f29f6558328ff2b726299c95b5b5ecb2 304 SUPERFAMILY SSF53807 18 302 4.81E-78 T 14-10-2018 ABED_1580 f29f6558328ff2b726299c95b5b5ecb2 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 286 2.9E-57 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 ABED_1580 f29f6558328ff2b726299c95b5b5ecb2 304 Gene3D G3DSA:3.40.50.1980 22 201 8.6E-46 T 14-10-2018 ABED_0381 e0b182baba739a0374e69a9420861ccc 567 SUPERFAMILY SSF55729 307 467 1.38E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABED_0381 e0b182baba739a0374e69a9420861ccc 567 SUPERFAMILY SSF69593 62 263 1.16E-12 T 14-10-2018 ABED_0381 e0b182baba739a0374e69a9420861ccc 567 SMART SM00563 82 199 7.5E-4 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABED_0381 e0b182baba739a0374e69a9420861ccc 567 Pfam PF13444 Acetyltransferase (GNAT) domain 325 425 8.8E-23 T 14-10-2018 ABED_0381 e0b182baba739a0374e69a9420861ccc 567 Pfam PF01553 Acyltransferase 71 194 9.3E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABED_1335 93f9946ec677a30ba654268d6377f8c2 510 Gene3D G3DSA:3.30.420.350 380 507 4.4E-10 T 14-10-2018 ABED_1816 bb8fdf8a954eb7e0c393df6fc251be2f 694 SUPERFAMILY SSF56935 29 694 1.11E-113 T 14-10-2018 ABED_1816 bb8fdf8a954eb7e0c393df6fc251be2f 694 Gene3D G3DSA:2.170.130.10 44 170 4.7E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_1816 bb8fdf8a954eb7e0c393df6fc251be2f 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 159 9.7E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1816 bb8fdf8a954eb7e0c393df6fc251be2f 694 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 694 5.8E-82 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ABED_1816 bb8fdf8a954eb7e0c393df6fc251be2f 694 Gene3D G3DSA:2.40.170.20 171 694 7.2E-105 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_1816 bb8fdf8a954eb7e0c393df6fc251be2f 694 Pfam PF00593 TonB dependent receptor 235 693 3.6E-56 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_0031 fc6f5cee26dab314ba24df665808d5ab 274 Gene3D G3DSA:3.10.50.40 152 232 2.4E-73 T 14-10-2018 ABED_0031 fc6f5cee26dab314ba24df665808d5ab 274 SUPERFAMILY SSF109998 20 154 2.35E-20 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABED_0031 fc6f5cee26dab314ba24df665808d5ab 274 Gene3D G3DSA:1.10.4030.30 23 274 2.4E-73 T 14-10-2018 ABED_0212 c181fa12f9fa68972f8fe52ebfe7d893 373 SUPERFAMILY SSF51713 1 370 5.23E-145 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABED_0212 c181fa12f9fa68972f8fe52ebfe7d893 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 371 3.6E-156 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABED_0212 c181fa12f9fa68972f8fe52ebfe7d893 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 371 1.8E-147 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABED_0212 c181fa12f9fa68972f8fe52ebfe7d893 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 367 1.7E-87 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABED_0212 c181fa12f9fa68972f8fe52ebfe7d893 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 370 52.569 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABED_0212 c181fa12f9fa68972f8fe52ebfe7d893 373 Gene3D G3DSA:3.20.20.105 1 373 1.2E-161 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABED_0263 f324129d64871426fa80fffffc8f8e66 163 Pfam PF12870 Domain of unknown function (DUF4878) 20 89 1.3E-5 T 14-10-2018 IPR024267 Domain of unknown function (DUF4878) ABED_1352 3ff215f93e57375b443623b6d324ba64 188 Gene3D G3DSA:3.40.30.10 22 188 2.3E-36 T 14-10-2018 ABED_1352 3ff215f93e57375b443623b6d324ba64 188 Pfam PF08534 Redoxin 61 176 1.0E-17 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ABED_1352 3ff215f93e57375b443623b6d324ba64 188 SUPERFAMILY SSF52833 63 186 3.31E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1727 d0241680140c2b8a619b6f8ed29cb2f0 620 Gene3D G3DSA:3.30.450.330 253 606 1.5E-78 T 14-10-2018 ABED_1727 d0241680140c2b8a619b6f8ed29cb2f0 620 Pfam PF00905 Penicillin binding protein transpeptidase domain 275 601 8.3E-64 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABED_1727 d0241680140c2b8a619b6f8ed29cb2f0 620 Pfam PF03717 Penicillin-binding Protein dimerisation domain 54 224 1.4E-10 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABED_1727 d0241680140c2b8a619b6f8ed29cb2f0 620 SUPERFAMILY SSF56519 53 248 1.7E-17 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABED_1727 d0241680140c2b8a619b6f8ed29cb2f0 620 SUPERFAMILY SSF56601 199 608 5.45E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABED_1727 d0241680140c2b8a619b6f8ed29cb2f0 620 Gene3D G3DSA:3.40.710.10 310 518 1.5E-78 T 14-10-2018 ABED_1727 d0241680140c2b8a619b6f8ed29cb2f0 620 Gene3D G3DSA:3.90.1310.30 49 248 6.6E-16 T 14-10-2018 ABED_1766 b17939520da35b6865f424d19d0e725f 719 SUPERFAMILY SSF117143 74 280 7.85E-16 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABED_1766 b17939520da35b6865f424d19d0e725f 719 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 236 2.0E-33 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABED_1766 b17939520da35b6865f424d19d0e725f 719 SUPERFAMILY SSF117143 433 679 4.71E-13 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABED_1766 b17939520da35b6865f424d19d0e725f 719 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 640 717 4.5E-17 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABED_2151 b63864460bf70682b8f02216aa3e7e45 249 Pfam PF08241 Methyltransferase domain 38 126 9.8E-26 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ABED_2151 b63864460bf70682b8f02216aa3e7e45 249 SUPERFAMILY SSF53335 4 204 4.3E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_2151 b63864460bf70682b8f02216aa3e7e45 249 Gene3D G3DSA:3.40.50.150 17 249 3.3E-59 T 14-10-2018 ABED_1118 3b5f4e3081e2fe9439c0e8be88787dcc 197 Gene3D G3DSA:3.40.50.360 3 86 1.7E-7 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_1118 3b5f4e3081e2fe9439c0e8be88787dcc 197 SUPERFAMILY SSF52218 18 85 3.54E-5 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_1168 39fcb3918046f6cf483a74f7716107dc 74 Pfam PF04324 BFD-like [2Fe-2S] binding domain 10 53 1.4E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ABED_1168 39fcb3918046f6cf483a74f7716107dc 74 Gene3D G3DSA:1.10.10.1100 9 64 3.2E-11 T 14-10-2018 ABED_1326 8880df8880632f91344c277fa1d50bd5 419 Pfam PF07399 Putative Na+/H+ antiporter 6 419 1.9E-180 T 14-10-2018 IPR009978 Putative Na+/H+ antiporter ABED_1805 ad8c460ffd3fdb5fb6e47682e898ae96 260 SUPERFAMILY SSF161098 63 244 1.7E-21 T 14-10-2018 IPR035906 MetI-like superfamily ABED_1805 ad8c460ffd3fdb5fb6e47682e898ae96 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 241 6.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_1805 ad8c460ffd3fdb5fb6e47682e898ae96 260 Gene3D G3DSA:1.10.3720.10 61 256 1.0E-17 T 14-10-2018 IPR035906 MetI-like superfamily ABED_1213 8147cfe94d90ae61dc4b06018433c997 197 SMART SM00849 12 177 3.0E-31 T 14-10-2018 IPR001279 Metallo-beta-lactamase ABED_1213 8147cfe94d90ae61dc4b06018433c997 197 Gene3D G3DSA:3.60.15.10 1 196 1.9E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABED_1213 8147cfe94d90ae61dc4b06018433c997 197 Pfam PF00753 Metallo-beta-lactamase superfamily 9 163 1.6E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase ABED_1213 8147cfe94d90ae61dc4b06018433c997 197 SUPERFAMILY SSF56281 6 188 1.83E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABED_1178 b97ddf46f64ae9e97f74ad7df957e63b 744 SUPERFAMILY SSF48452 428 593 2.28E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1178 b97ddf46f64ae9e97f74ad7df957e63b 744 Gene3D G3DSA:1.25.40.10 336 681 7.2E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0740 c15f307786a04ecacfcb83e2f7f3b9ca 187 SUPERFAMILY SSF109854 79 184 1.54E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABED_0740 c15f307786a04ecacfcb83e2f7f3b9ca 187 Gene3D G3DSA:1.20.120.450 42 184 7.0E-14 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABED_1726 89b318a1847204e1845ace2201002f4d 429 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_1726 89b318a1847204e1845ace2201002f4d 429 Pfam PF01098 Cell cycle protein 23 400 1.4E-81 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABED_0581 9b1a1816b41f8a8a1e6613869a1a1425 660 Gene3D G3DSA:2.40.170.20 142 660 7.4E-77 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ABED_0581 9b1a1816b41f8a8a1e6613869a1a1425 660 Gene3D G3DSA:2.170.130.10 36 141 7.0E-8 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ABED_0581 9b1a1816b41f8a8a1e6613869a1a1425 660 SUPERFAMILY SSF56935 44 660 1.25E-82 T 14-10-2018 ABED_0581 9b1a1816b41f8a8a1e6613869a1a1425 660 Pfam PF00593 TonB dependent receptor 231 659 3.6E-32 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ABED_0581 9b1a1816b41f8a8a1e6613869a1a1425 660 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 124 1.8E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain ABED_1196 87ccb8bdd619312f501ef564d4877ea8 378 PIRSF PIRSF016636 4 375 6.2E-63 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB ABED_1196 87ccb8bdd619312f501ef564d4877ea8 378 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 124 362 2.9E-10 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT ABED_2041 e3f5aa4347e670bd7b2d9d0868c352ae 577 SUPERFAMILY SSF52540 330 562 1.67E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_2041 e3f5aa4347e670bd7b2d9d0868c352ae 577 SMART SM00382 356 495 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain ABED_2041 e3f5aa4347e670bd7b2d9d0868c352ae 577 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 360 491 3.8E-27 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABED_2041 e3f5aa4347e670bd7b2d9d0868c352ae 577 Gene3D G3DSA:3.40.50.300 297 507 1.7E-40 T 14-10-2018 ABED_0715 bbce41798e37bf1d380440cfd42ae38a 119 SUPERFAMILY SSF53137 10 117 1.11E-38 T 14-10-2018 ABED_0715 bbce41798e37bf1d380440cfd42ae38a 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 119 5.1E-37 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0715 bbce41798e37bf1d380440cfd42ae38a 119 Gene3D G3DSA:3.30.420.100 8 119 6.8E-30 T 14-10-2018 ABED_0715 bbce41798e37bf1d380440cfd42ae38a 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 12 119 1.9E-35 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_0715 bbce41798e37bf1d380440cfd42ae38a 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 9 119 23.497 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABED_2130 62a6334608e144995e77cf9f7457938d 454 Pfam PF14403 Circularly permuted ATP-grasp type 2 57 430 8.8E-126 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 ABED_2130 62a6334608e144995e77cf9f7457938d 454 SUPERFAMILY SSF56059 16 428 2.59E-37 T 14-10-2018 ABED_2130 62a6334608e144995e77cf9f7457938d 454 PIRSF PIRSF005522 7 454 6.3E-156 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 ABED_2130 62a6334608e144995e77cf9f7457938d 454 Gene3D G3DSA:3.40.50.11290 197 290 1.1E-27 T 14-10-2018 ABED_2130 62a6334608e144995e77cf9f7457938d 454 Gene3D G3DSA:3.30.1490.270 330 386 8.2E-18 T 14-10-2018 ABED_0289 60a2796318ae3da1c480da7196afb84a 173 Gene3D G3DSA:1.20.120.1200 2 162 4.1E-38 T 14-10-2018 ABED_0289 60a2796318ae3da1c480da7196afb84a 173 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 160 2.8E-31 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABED_0553 84e0ed7a1392ef65324997f831854ad9 107 SUPERFAMILY SSF51182 15 105 1.78E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily ABED_0553 84e0ed7a1392ef65324997f831854ad9 107 Gene3D G3DSA:2.60.120.10 12 107 3.1E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold ABED_0553 84e0ed7a1392ef65324997f831854ad9 107 Pfam PF12973 ChrR Cupin-like domain 23 105 1.0E-17 T 14-10-2018 IPR025979 ChrR-like cupin domain ABED_1260 a22a12ff4055ee6c04606dccbb03f3e9 1546 SUPERFAMILY SSF52540 384 575 4.43E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1404 d4fb7f7594d29da6fa1279131ce53544 93 SUPERFAMILY SSF55008 18 88 4.84E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABED_1404 d4fb7f7594d29da6fa1279131ce53544 93 PRINTS PR00946 Mercury scavenger protein signature 27 43 1.5E-8 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ABED_1404 d4fb7f7594d29da6fa1279131ce53544 93 PRINTS PR00946 Mercury scavenger protein signature 58 72 1.5E-8 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ABED_1404 d4fb7f7594d29da6fa1279131ce53544 93 PRINTS PR00946 Mercury scavenger protein signature 16 27 1.5E-8 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ABED_1404 d4fb7f7594d29da6fa1279131ce53544 93 PRINTS PR00946 Mercury scavenger protein signature 43 58 1.5E-8 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 ABED_1404 d4fb7f7594d29da6fa1279131ce53544 93 Gene3D G3DSA:3.30.70.100 18 84 6.8E-19 T 14-10-2018 ABED_1404 d4fb7f7594d29da6fa1279131ce53544 93 Pfam PF00403 Heavy-metal-associated domain 21 82 5.8E-17 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABED_1222 75ec22ddfa23cc47dafeab5295dd3548 176 SUPERFAMILY SSF89392 23 175 5.49E-27 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX ABED_1222 75ec22ddfa23cc47dafeab5295dd3548 176 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 24 166 4.1E-13 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like ABED_1222 75ec22ddfa23cc47dafeab5295dd3548 176 Gene3D G3DSA:2.50.20.10 18 176 1.8E-19 T 14-10-2018 ABED_1595 547cf3b7f43512a5993a6485d31b500b 629 SUPERFAMILY SSF51445 58 304 5.28E-45 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily ABED_1595 547cf3b7f43512a5993a6485d31b500b 629 ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature. 228 241 - T 14-10-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 ABED_1595 547cf3b7f43512a5993a6485d31b500b 629 Gene3D G3DSA:3.20.20.80 50 313 4.1E-12 T 14-10-2018 ABED_0754 f3c678fcdbe4ef90503694f9010029d9 411 SUPERFAMILY SSF102114 25 250 2.75E-17 T 14-10-2018 ABED_0754 f3c678fcdbe4ef90503694f9010029d9 411 Gene3D G3DSA:3.20.20.70 50 278 3.7E-7 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0754 f3c678fcdbe4ef90503694f9010029d9 411 Gene3D G3DSA:1.10.150.320 306 366 2.4E-7 T 14-10-2018 ABED_0754 f3c678fcdbe4ef90503694f9010029d9 411 Pfam PF04055 Radical SAM superfamily 62 228 4.8E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABED_0754 f3c678fcdbe4ef90503694f9010029d9 411 SUPERFAMILY SSF47781 291 370 7.04E-12 T 14-10-2018 IPR010994 RuvA domain 2-like ABED_0754 f3c678fcdbe4ef90503694f9010029d9 411 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 403 3.4E-171 T 14-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative ABED_1538 22e4be5bfb13d0acf049c41986d9023f 436 SUPERFAMILY SSF53098 286 432 3.15E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_1538 22e4be5bfb13d0acf049c41986d9023f 436 Pfam PF11074 Domain of unknown function(DUF2779) 238 362 1.3E-41 T 14-10-2018 IPR021301 Domain of unknown functionDUF2779 ABED_0247 96e260d97704254c1e11a6a7a95536f9 223 Pfam PF00072 Response regulator receiver domain 13 114 3.6E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0247 96e260d97704254c1e11a6a7a95536f9 223 SUPERFAMILY SSF52172 19 169 1.85E-12 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0247 96e260d97704254c1e11a6a7a95536f9 223 Gene3D G3DSA:3.40.50.2300 7 128 1.2E-10 T 14-10-2018 ABED_0247 96e260d97704254c1e11a6a7a95536f9 223 SMART SM00862 150 219 2.5E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0247 96e260d97704254c1e11a6a7a95536f9 223 SUPERFAMILY SSF46894 134 219 6.52E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABED_0247 96e260d97704254c1e11a6a7a95536f9 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 219 2.4E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0247 96e260d97704254c1e11a6a7a95536f9 223 Gene3D G3DSA:1.10.10.10 129 222 1.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0994 b4d448387661dc182bea8679e2a60cba 113 SUPERFAMILY SSF46785 7 108 6.16E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0994 b4d448387661dc182bea8679e2a60cba 113 Gene3D G3DSA:1.10.10.10 5 113 1.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0994 b4d448387661dc182bea8679e2a60cba 113 Pfam PF01638 HxlR-like helix-turn-helix 19 107 2.4E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type ABED_1391 c76e8fa8d82b626b5cf1fd5a46663d8f 327 Gene3D G3DSA:3.90.1150.10 178 327 1.6E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_1391 c76e8fa8d82b626b5cf1fd5a46663d8f 327 ProSitePatterns PS00018 EF-hand calcium-binding domain. 98 110 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site ABED_1391 c76e8fa8d82b626b5cf1fd5a46663d8f 327 SUPERFAMILY SSF53383 34 321 3.65E-17 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0700 90372ff1a320e7589abc59192d62578d 203 SUPERFAMILY SSF52166 1 200 1.44E-60 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0700 90372ff1a320e7589abc59192d62578d 203 Gene3D G3DSA:3.40.1370.10 4 203 5.8E-58 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ABED_0700 90372ff1a320e7589abc59192d62578d 203 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 203 25.383 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_0700 90372ff1a320e7589abc59192d62578d 203 Pfam PF00573 Ribosomal protein L4/L1 family 24 201 9.2E-54 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 ABED_0700 90372ff1a320e7589abc59192d62578d 203 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 24 200 3.6E-60 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABED_1175 b27eb21ab9057f71d805d77c3c99069d 411 Pfam PF03772 Competence protein 148 348 3.0E-24 T 14-10-2018 IPR004477 ComEC/Rec2-related protein ABED_1175 b27eb21ab9057f71d805d77c3c99069d 411 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 161 321 6.3E-13 T 14-10-2018 IPR004477 ComEC/Rec2-related protein ABED_2123 b77bc9f626601aa7885337a40daaab0c 261 SUPERFAMILY SSF161098 59 240 3.4E-36 T 14-10-2018 IPR035906 MetI-like superfamily ABED_2123 b77bc9f626601aa7885337a40daaab0c 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 252 2.8E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_2123 b77bc9f626601aa7885337a40daaab0c 261 Gene3D G3DSA:1.10.3720.10 60 252 2.5E-28 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0808 cc5821d37cedbb7ebbf551736421abed 630 Pfam PF03235 Protein of unknown function DUF262 9 199 7.1E-30 T 14-10-2018 IPR004919 Domain of unknown function DUF262 ABED_0808 cc5821d37cedbb7ebbf551736421abed 630 ProDom PD062361 VC1766 YFJM PM0595 552 622 0.001 T 14-10-2018 ABED_0808 cc5821d37cedbb7ebbf551736421abed 630 Pfam PF07510 Protein of unknown function (DUF1524) 490 617 3.9E-15 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 ABED_1077 1af11bad86b54f5ba27757a46c98db1f 194 Gene3D G3DSA:3.10.620.30 1 146 3.5E-16 T 14-10-2018 ABED_1077 1af11bad86b54f5ba27757a46c98db1f 194 SUPERFAMILY SSF54001 17 132 2.7E-22 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_1077 1af11bad86b54f5ba27757a46c98db1f 194 Pfam PF01841 Transglutaminase-like superfamily 20 128 4.6E-14 T 14-10-2018 IPR002931 Transglutaminase-like ABED_1701 57a48b11ea60199f6e5c77d2d6e4b905 425 TIGRFAM TIGR00843 benE: benzoate transporter 35 416 2.4E-121 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ABED_1701 57a48b11ea60199f6e5c77d2d6e4b905 425 Pfam PF03594 Benzoate membrane transport protein 44 415 1.6E-135 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ABED_0066 743bc8629f1aa93b7930a1c82de399e7 187 SUPERFAMILY SSF101874 22 186 1.31E-51 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0066 743bc8629f1aa93b7930a1c82de399e7 187 Pfam PF04264 YceI-like domain 23 184 2.7E-44 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_0066 743bc8629f1aa93b7930a1c82de399e7 187 SMART SM00867 22 185 4.0E-66 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABED_0066 743bc8629f1aa93b7930a1c82de399e7 187 Gene3D G3DSA:2.40.128.110 21 187 1.9E-50 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABED_0062 faf1cea07e0f717156a155cfc29347d7 127 Pfam PF13115 YtkA-like 28 109 2.3E-23 T 14-10-2018 IPR032693 YtkA-like domain ABED_0589 916a00b74a90ecae7a2e65baeee8f83f 409 Gene3D G3DSA:1.10.3210.10 5 186 3.1E-16 T 14-10-2018 ABED_0589 916a00b74a90ecae7a2e65baeee8f83f 409 Gene3D G3DSA:1.10.3210.10 187 399 1.3E-35 T 14-10-2018 ABED_0589 916a00b74a90ecae7a2e65baeee8f83f 409 SUPERFAMILY SSF109604 180 378 6.67E-30 T 14-10-2018 ABED_0589 916a00b74a90ecae7a2e65baeee8f83f 409 Pfam PF13023 HD domain 192 372 3.4E-42 T 14-10-2018 IPR006674 HD domain ABED_2148 15ae1a19a1851da7a2a140cdc23647c5 126 Gene3D G3DSA:1.20.120.1490 22 126 9.2E-9 T 14-10-2018 ABED_2100 b413cc1fe3e0b89d4e83c9bc8114c74a 321 SUPERFAMILY SSF56300 99 320 8.25E-40 T 14-10-2018 ABED_2100 b413cc1fe3e0b89d4e83c9bc8114c74a 321 Gene3D G3DSA:3.60.21.10 98 288 1.5E-26 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like ABED_2100 b413cc1fe3e0b89d4e83c9bc8114c74a 321 Pfam PF00149 Calcineurin-like phosphoesterase 99 264 1.7E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABED_1308 a33784c085c5b2eaa3e613985350eb4c 118 PIRSF PIRSF029826 1 114 2.3E-43 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 ABED_1308 a33784c085c5b2eaa3e613985350eb4c 118 SUPERFAMILY SSF101386 1 116 8.29E-35 T 14-10-2018 ABED_1308 a33784c085c5b2eaa3e613985350eb4c 118 Gene3D G3DSA:1.10.287.1080 1 105 5.9E-36 T 14-10-2018 ABED_1308 a33784c085c5b2eaa3e613985350eb4c 118 Pfam PF12643 MazG-like family 31 112 8.6E-14 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 ABED_1900 d0f0b4284fac2b782ab3eaf1980abec9 362 SUPERFAMILY SSF103473 4 358 9.81E-45 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_1900 d0f0b4284fac2b782ab3eaf1980abec9 362 Pfam PF07690 Major Facilitator Superfamily 6 304 4.0E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_1900 d0f0b4284fac2b782ab3eaf1980abec9 362 Gene3D G3DSA:1.20.1250.20 1 359 4.2E-41 T 14-10-2018 ABED_0248 e5cb087f79bfe1a09aa0ecae1eec26d4 192 SUPERFAMILY SSF56752 6 183 6.15E-22 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ABED_0248 e5cb087f79bfe1a09aa0ecae1eec26d4 192 Pfam PF01063 Amino-transferase class IV 100 182 5.8E-12 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ABED_0248 e5cb087f79bfe1a09aa0ecae1eec26d4 192 Gene3D G3DSA:3.20.10.10 72 180 1.3E-27 T 14-10-2018 ABED_0248 e5cb087f79bfe1a09aa0ecae1eec26d4 192 Gene3D G3DSA:3.30.470.10 3 71 3.9E-7 T 14-10-2018 ABED_1393 8d2eee274d3a329482a3756034bc6692 319 Pfam PF01292 Prokaryotic cytochrome b561 128 291 1.1E-9 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ABED_1393 8d2eee274d3a329482a3756034bc6692 319 SUPERFAMILY SSF81342 123 314 1.73E-18 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABED_1393 8d2eee274d3a329482a3756034bc6692 319 Gene3D G3DSA:1.20.950.20 121 319 1.1E-14 T 14-10-2018 ABED_0474 83d88ca61b606da1818b235928fc462a 555 Gene3D G3DSA:1.20.1730.10 48 549 7.6E-63 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily ABED_0474 83d88ca61b606da1818b235928fc462a 555 Pfam PF00474 Sodium:solute symporter family 61 474 8.7E-106 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABED_0474 83d88ca61b606da1818b235928fc462a 555 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 176 201 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site ABED_0474 83d88ca61b606da1818b235928fc462a 555 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 61 474 9.1E-61 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABED_1467 76b092ca244bc6b12259b6b170c73daf 199 Pfam PF02589 LUD domain 2 192 4.2E-41 T 14-10-2018 IPR003741 LUD domain ABED_1664 fb5c0bfa6603d412afb1a6ba6160cb42 651 SUPERFAMILY SSF58104 275 594 1.31E-53 T 14-10-2018 ABED_1664 fb5c0bfa6603d412afb1a6ba6160cb42 651 Gene3D G3DSA:1.10.287.950 306 600 9.4E-57 T 14-10-2018 ABED_1664 fb5c0bfa6603d412afb1a6ba6160cb42 651 SMART SM00283 362 594 2.1E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1664 fb5c0bfa6603d412afb1a6ba6160cb42 651 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 414 569 1.2E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0900 99d680f94ff6d3d0e4eab70d65f4872e 361 Pfam PF01594 AI-2E family transporter 14 332 1.7E-41 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like ABED_2094 039908bdbc962db240c6c06b86863902 246 Pfam PF03883 Peroxide stress protein YaaA 1 230 1.2E-34 T 14-10-2018 IPR005583 Peroxide stress protein YaaA ABED_0130 0533048e038856148d9f5642d6c0bfd4 167 Pfam PF03358 NADPH-dependent FMN reductase 2 145 6.5E-22 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABED_0130 0533048e038856148d9f5642d6c0bfd4 167 SUPERFAMILY SSF52218 2 148 2.48E-24 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_0130 0533048e038856148d9f5642d6c0bfd4 167 Gene3D G3DSA:3.40.50.360 1 167 2.2E-25 T 14-10-2018 IPR029039 Flavoprotein-like superfamily ABED_0555 8bf6a9408ea0c56106f543fa571699fc 130 Gene3D G3DSA:3.30.450.20 2 109 2.9E-23 T 14-10-2018 ABED_0555 8bf6a9408ea0c56106f543fa571699fc 130 SUPERFAMILY SSF55785 13 105 7.15E-24 T 14-10-2018 IPR035965 PAS domain superfamily ABED_0555 8bf6a9408ea0c56106f543fa571699fc 130 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 113 3.0E-15 T 14-10-2018 IPR000014 PAS domain ABED_0555 8bf6a9408ea0c56106f543fa571699fc 130 Pfam PF08447 PAS fold 23 105 6.7E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 ABED_1745 494fa765059e03300c3ab67f4aab3184 202 SUPERFAMILY SSF50475 16 188 1.23E-24 T 14-10-2018 ABED_1745 494fa765059e03300c3ab67f4aab3184 202 Gene3D G3DSA:2.30.110.10 16 198 1.4E-38 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABED_1745 494fa765059e03300c3ab67f4aab3184 202 Pfam PF01613 Flavin reductase like domain 37 169 1.5E-15 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABED_1833 fbb342b21d20cc1b174ba744e8ef7302 229 PIRSF PIRSF000386 1 229 8.2E-79 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABED_1833 fbb342b21d20cc1b174ba744e8ef7302 229 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 4.4E-50 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABED_1833 fbb342b21d20cc1b174ba744e8ef7302 229 Gene3D G3DSA:1.10.1270.20 173 229 3.8E-11 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABED_1833 fbb342b21d20cc1b174ba744e8ef7302 229 SUPERFAMILY SSF75217 2 226 6.54E-75 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases ABED_1833 fbb342b21d20cc1b174ba744e8ef7302 229 Gene3D G3DSA:3.40.1280.10 1 172 2.0E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABED_1833 fbb342b21d20cc1b174ba744e8ef7302 229 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 229 74.728 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABED_1833 fbb342b21d20cc1b174ba744e8ef7302 229 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 225 1.1E-76 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABED_0213 a6300bfaa38c035319935c5b2754e199 480 Gene3D G3DSA:3.30.70.1450 141 223 2.8E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABED_0213 a6300bfaa38c035319935c5b2754e199 480 SUPERFAMILY SSF116726 150 218 3.14E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABED_0213 a6300bfaa38c035319935c5b2754e199 480 Pfam PF02080 TrkA-C domain 151 217 4.1E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ABED_1592 1c04188cd69a9dcf1a9a16f829e602ac 72 SUPERFAMILY SSF47413 1 45 2.19E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABED_0755 4f396bed5b56c6b6d1e30d14a2faeb75 243 Pfam PF13566 Domain of unknown function (DUF4130 83 240 1.2E-38 T 14-10-2018 IPR025404 Domain of unknown function DUF4130 ABED_0755 4f396bed5b56c6b6d1e30d14a2faeb75 243 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 3 241 4.0E-67 T 14-10-2018 IPR023875 DNA metabolism protein, putative ABED_1370 cba77205654bbf79a7864be3b8c28ea2 233 SUPERFAMILY SSF50800 10 222 6.28E-55 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ABED_1370 cba77205654bbf79a7864be3b8c28ea2 233 Gene3D G3DSA:2.40.33.20 2 232 1.4E-56 T 14-10-2018 ABED_1370 cba77205654bbf79a7864be3b8c28ea2 233 Pfam PF03473 MOSC domain 56 169 1.8E-15 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ABED_0119 53263764bfb357034c16a5a3c13cef39 296 Gene3D G3DSA:3.40.50.2300 1 118 8.3E-14 T 14-10-2018 ABED_0119 53263764bfb357034c16a5a3c13cef39 296 SUPERFAMILY SSF52172 1 129 1.71E-13 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0119 53263764bfb357034c16a5a3c13cef39 296 SMART SM00448 1 106 1.9E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0119 53263764bfb357034c16a5a3c13cef39 296 Pfam PF00072 Response regulator receiver domain 39 106 4.9E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 18 33 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 97 114 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 168 186 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 50 65 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 142 160 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 114 132 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 230 242 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 75 94 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 PRINTS PR01010 Flagellar P-ring protein signature 33 48 1.5E-57 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 348 28.051 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0186 c4f3328e6eb74254f23e950f879526b0 349 Pfam PF02119 Flagellar P-ring protein 19 346 5.4E-91 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ABED_0548 00fedf0472f002eee61c0516757ec409 187 Pfam PF01694 Rhomboid family 46 176 7.4E-25 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ABED_0548 00fedf0472f002eee61c0516757ec409 187 Gene3D G3DSA:1.20.1540.10 2 185 1.5E-33 T 14-10-2018 IPR035952 Rhomboid-like superfamily ABED_0548 00fedf0472f002eee61c0516757ec409 187 SUPERFAMILY SSF144091 10 178 5.49E-35 T 14-10-2018 ABED_1957 3fa3d6d50cae17f67901dcce1b304fbe 466 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 461 7.6E-108 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 ABED_1957 3fa3d6d50cae17f67901dcce1b304fbe 466 SUPERFAMILY SSF56954 3 461 2.49E-104 T 14-10-2018 ABED_1957 3fa3d6d50cae17f67901dcce1b304fbe 466 Gene3D G3DSA:2.20.200.10 101 351 2.4E-120 T 14-10-2018 ABED_1957 3fa3d6d50cae17f67901dcce1b304fbe 466 Gene3D G3DSA:1.20.1600.10 55 461 2.4E-120 T 14-10-2018 ABED_1957 3fa3d6d50cae17f67901dcce1b304fbe 466 Pfam PF02321 Outer membrane efflux protein 65 248 9.9E-35 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_1957 3fa3d6d50cae17f67901dcce1b304fbe 466 Pfam PF02321 Outer membrane efflux protein 283 458 2.5E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0078 3b049f3f934b979cb5c69e9cc8c20719 200 Gene3D G3DSA:3.90.550.10 5 193 1.9E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0078 3b049f3f934b979cb5c69e9cc8c20719 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 188 19.526 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 ABED_0078 3b049f3f934b979cb5c69e9cc8c20719 200 Pfam PF12804 MobA-like NTP transferase domain 10 149 1.6E-19 T 14-10-2018 IPR025877 MobA-like NTP transferase ABED_0078 3b049f3f934b979cb5c69e9cc8c20719 200 SUPERFAMILY SSF53448 8 186 6.88E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0482 782e172e9e7918e5a6a36cb4341dc6a6 220 Gene3D G3DSA:3.40.50.2300 1 131 6.6E-27 T 14-10-2018 ABED_0482 782e172e9e7918e5a6a36cb4341dc6a6 220 SUPERFAMILY SSF52172 1 169 6.69E-29 T 14-10-2018 IPR011006 CheY-like superfamily ABED_0482 782e172e9e7918e5a6a36cb4341dc6a6 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 214 1.6E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0482 782e172e9e7918e5a6a36cb4341dc6a6 220 SMART SM00862 144 214 7.0E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABED_0482 782e172e9e7918e5a6a36cb4341dc6a6 220 Gene3D G3DSA:1.10.10.10 132 218 3.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0482 782e172e9e7918e5a6a36cb4341dc6a6 220 SMART SM00448 1 111 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_0482 782e172e9e7918e5a6a36cb4341dc6a6 220 Pfam PF00072 Response regulator receiver domain 3 109 1.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABED_1857 2f1c178504f6ee2d433ec44c8b8edd53 278 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 278 31.164 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABED_1857 2f1c178504f6ee2d433ec44c8b8edd53 278 Gene3D G3DSA:3.40.1010.20 93 188 4.0E-90 T 14-10-2018 ABED_1857 2f1c178504f6ee2d433ec44c8b8edd53 278 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 276 5.0E-95 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABED_1857 2f1c178504f6ee2d433ec44c8b8edd53 278 Gene3D G3DSA:3.40.50.11270 12 92 4.0E-90 T 14-10-2018 ABED_1857 2f1c178504f6ee2d433ec44c8b8edd53 278 Gene3D G3DSA:3.40.1010.20 3 274 4.0E-90 T 14-10-2018 ABED_1857 2f1c178504f6ee2d433ec44c8b8edd53 278 Pfam PF02401 LytB protein 3 275 5.6E-84 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABED_1200 bbdd440f3dc3f810ba349255af2e87ee 166 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 6.6E-10 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_1200 bbdd440f3dc3f810ba349255af2e87ee 166 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 43 6.0E-5 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_1200 bbdd440f3dc3f810ba349255af2e87ee 166 Gene3D G3DSA:2.160.10.10 1 166 1.9E-66 T 14-10-2018 ABED_1200 bbdd440f3dc3f810ba349255af2e87ee 166 SUPERFAMILY SSF51161 4 165 5.41E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_0939 aa356b3b2ad1a9acce3517bfcf9ef207 450 Pfam PF02321 Outer membrane efflux protein 22 238 8.4E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0939 aa356b3b2ad1a9acce3517bfcf9ef207 450 Pfam PF02321 Outer membrane efflux protein 259 442 2.9E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0939 aa356b3b2ad1a9acce3517bfcf9ef207 450 Gene3D G3DSA:1.20.1600.10 17 450 6.8E-61 T 14-10-2018 ABED_0939 aa356b3b2ad1a9acce3517bfcf9ef207 450 SUPERFAMILY SSF56954 7 444 2.49E-61 T 14-10-2018 ABED_1086 e72a5d6f4745d36e954b3636269dae96 273 PRINTS PR00412 Epoxide hydrolase signature 89 102 5.1E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABED_1086 e72a5d6f4745d36e954b3636269dae96 273 PRINTS PR00412 Epoxide hydrolase signature 27 45 5.1E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABED_1086 e72a5d6f4745d36e954b3636269dae96 273 PRINTS PR00412 Epoxide hydrolase signature 103 116 5.1E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABED_1086 e72a5d6f4745d36e954b3636269dae96 273 PRINTS PR00412 Epoxide hydrolase signature 248 270 5.1E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABED_1086 e72a5d6f4745d36e954b3636269dae96 273 Pfam PF00561 alpha/beta hydrolase fold 22 257 2.5E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABED_1086 e72a5d6f4745d36e954b3636269dae96 273 Gene3D G3DSA:3.40.50.1820 3 271 6.9E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_1086 e72a5d6f4745d36e954b3636269dae96 273 SUPERFAMILY SSF53474 10 273 8.18E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_2035 a79dc35839cbd60e9f64ac053ee7a8d7 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 58 7.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABED_2035 a79dc35839cbd60e9f64ac053ee7a8d7 179 SUPERFAMILY SSF46689 6 77 5.13E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABED_2035 a79dc35839cbd60e9f64ac053ee7a8d7 179 Gene3D G3DSA:1.10.357.10 7 178 1.2E-17 T 14-10-2018 ABED_1637 03724188889d33abf9c44905af31f2ee 208 SUPERFAMILY SSF51161 74 201 1.11E-21 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_1637 03724188889d33abf9c44905af31f2ee 208 Gene3D G3DSA:2.160.10.10 11 207 6.9E-41 T 14-10-2018 ABED_1637 03724188889d33abf9c44905af31f2ee 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 172 0.0012 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_0583 fd5a86386e6543f0265709b18af19f42 463 Gene3D G3DSA:1.10.287.950 154 456 1.4E-47 T 14-10-2018 ABED_0583 fd5a86386e6543f0265709b18af19f42 463 SUPERFAMILY SSF58104 183 456 1.57E-43 T 14-10-2018 ABED_0583 fd5a86386e6543f0265709b18af19f42 463 SMART SM00283 216 456 1.1E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_0583 fd5a86386e6543f0265709b18af19f42 463 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 278 422 1.1E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABED_1670 991eab4dabb2143de9f7338b774a6f3f 235 SUPERFAMILY SSF53335 15 235 2.69E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1670 991eab4dabb2143de9f7338b774a6f3f 235 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 3 235 2.9E-77 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 ABED_1670 991eab4dabb2143de9f7338b774a6f3f 235 Gene3D G3DSA:3.40.50.150 14 235 3.0E-60 T 14-10-2018 ABED_1670 991eab4dabb2143de9f7338b774a6f3f 235 PIRSF PIRSF006325 1 235 5.7E-87 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 ABED_1670 991eab4dabb2143de9f7338b774a6f3f 235 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 1 235 39.132 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 ABED_1670 991eab4dabb2143de9f7338b774a6f3f 235 Pfam PF13649 Methyltransferase domain 56 151 2.6E-14 T 14-10-2018 ABED_1007 ebd06700550273e8044fbd9cb27b3aa7 300 Pfam PF03547 Membrane transport protein 1 140 2.8E-16 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_1007 ebd06700550273e8044fbd9cb27b3aa7 300 Pfam PF03547 Membrane transport protein 153 295 1.0E-14 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_1007 ebd06700550273e8044fbd9cb27b3aa7 300 Gene3D G3DSA:1.20.1530.20 158 298 3.3E-5 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily ABED_1724 cb885fd600d0e5656470a6da3b0a6293 256 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 256 17.484 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABED_1724 cb885fd600d0e5656470a6da3b0a6293 256 Pfam PF02673 Bacitracin resistance protein BacA 7 251 1.1E-72 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABED_1229 de9f7f7d93510d7f912f45c7e0fe69aa 92 Gene3D G3DSA:1.10.760.10 18 91 3.9E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1229 de9f7f7d93510d7f912f45c7e0fe69aa 92 SUPERFAMILY SSF46626 22 88 5.36E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0644 ec9736b7a12a584e54bb88dd8568ce4e 320 Pfam PF00953 Glycosyl transferase family 4 71 215 7.1E-28 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ABED_0570 5077dd991c7b5032e8b34be7b29a7bcc 207 Gene3D G3DSA:3.10.580.10 132 200 3.8E-13 T 14-10-2018 ABED_0570 5077dd991c7b5032e8b34be7b29a7bcc 207 Pfam PF00571 CBS domain 144 198 6.2E-11 T 14-10-2018 IPR000644 CBS domain ABED_0570 5077dd991c7b5032e8b34be7b29a7bcc 207 Pfam PF00571 CBS domain 74 129 1.3E-7 T 14-10-2018 IPR000644 CBS domain ABED_0570 5077dd991c7b5032e8b34be7b29a7bcc 207 SMART SM00116 150 198 3.6E-9 T 14-10-2018 IPR000644 CBS domain ABED_0570 5077dd991c7b5032e8b34be7b29a7bcc 207 SMART SM00116 81 129 1.5 T 14-10-2018 IPR000644 CBS domain ABED_0570 5077dd991c7b5032e8b34be7b29a7bcc 207 SUPERFAMILY SSF54631 72 197 8.46E-25 T 14-10-2018 ABED_0570 5077dd991c7b5032e8b34be7b29a7bcc 207 Gene3D G3DSA:3.10.580.10 6 131 7.4E-11 T 14-10-2018 ABED_1337 68935eb6af80d06ea34bd533bea3e4c0 228 Pfam PF01292 Prokaryotic cytochrome b561 2 209 1.7E-25 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ABED_1337 68935eb6af80d06ea34bd533bea3e4c0 228 SUPERFAMILY SSF81342 3 218 6.37E-16 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABED_1337 68935eb6af80d06ea34bd533bea3e4c0 228 Gene3D G3DSA:1.20.950.20 2 204 5.2E-36 T 14-10-2018 ABED_1337 68935eb6af80d06ea34bd533bea3e4c0 228 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 43 67 3.5E-13 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1337 68935eb6af80d06ea34bd533bea3e4c0 228 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 176 198 3.5E-13 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1337 68935eb6af80d06ea34bd533bea3e4c0 228 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 3 26 3.5E-13 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_1337 68935eb6af80d06ea34bd533bea3e4c0 228 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 207 220 3.5E-13 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 ABED_2146 31586e2815644948a24fd0a1e4e48ef7 257 SUPERFAMILY SSF81342 2 187 4.08E-32 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABED_2146 31586e2815644948a24fd0a1e4e48ef7 257 Pfam PF01292 Prokaryotic cytochrome b561 7 181 3.7E-27 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ABED_2146 31586e2815644948a24fd0a1e4e48ef7 257 Gene3D G3DSA:1.20.950.20 30 170 3.6E-20 T 14-10-2018 ABED_2102 889fd6cdffd878605818ff1264d6e613 146 Gene3D G3DSA:1.20.120.50 9 138 2.7E-20 T 14-10-2018 IPR035938 Hemerythrin-like superfamily ABED_2102 889fd6cdffd878605818ff1264d6e613 146 ProSitePatterns PS00550 Hemerythrin family signature. 63 86 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 ABED_2102 889fd6cdffd878605818ff1264d6e613 146 SUPERFAMILY SSF47188 11 135 1.83E-19 T 14-10-2018 IPR035938 Hemerythrin-like superfamily ABED_0443 ce4482afe5adbe37d17ac1280aa78bb4 377 TIGRFAM TIGR03907 QH_beta: quinohemoprotein amine dehydrogenase, beta subunit 39 375 2.6E-105 T 14-10-2018 IPR023879 Quinohemoprotein amine dehydrogenase, beta subunit ABED_0443 ce4482afe5adbe37d17ac1280aa78bb4 377 SUPERFAMILY SSF50969 34 363 1.1E-31 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like ABED_0443 ce4482afe5adbe37d17ac1280aa78bb4 377 Gene3D G3DSA:2.130.10.10 29 376 3.3E-116 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ABED_2046 47fe4966783edcd10830a1e25af68030 170 Gene3D G3DSA:3.60.21.10 1 150 2.3E-34 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like ABED_2046 47fe4966783edcd10830a1e25af68030 170 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 147 1.3E-25 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 ABED_2046 47fe4966783edcd10830a1e25af68030 170 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 144 1.1E-22 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 ABED_2046 47fe4966783edcd10830a1e25af68030 170 SUPERFAMILY SSF56300 1 157 1.35E-32 T 14-10-2018 ABED_2083 22d6095c0313972530208443fbb02639 185 SUPERFAMILY SSF55194 3 184 3.01E-64 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 ABED_2083 22d6095c0313972530208443fbb02639 185 Gene3D G3DSA:3.30.1360.40 31 105 4.3E-61 T 14-10-2018 ABED_2083 22d6095c0313972530208443fbb02639 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 24.66 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ABED_2083 22d6095c0313972530208443fbb02639 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.6E-70 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ABED_2083 22d6095c0313972530208443fbb02639 185 Pfam PF01765 Ribosome recycling factor 20 183 1.4E-56 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 ABED_2083 22d6095c0313972530208443fbb02639 185 Gene3D G3DSA:1.10.132.20 12 182 4.3E-61 T 14-10-2018 ABED_1202 a2377f9991cedf731edc9cba2e9c90db 441 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 23 413 5.7E-104 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 ABED_1202 a2377f9991cedf731edc9cba2e9c90db 441 Pfam PF02386 Cation transport protein 32 418 1.8E-56 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 ABED_1562 755addbf478e40677ba7ea79d01b8392 245 SUPERFAMILY SSF141523 88 228 1.44E-15 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABED_1562 755addbf478e40677ba7ea79d01b8392 245 Gene3D G3DSA:2.40.440.10 58 231 1.5E-25 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABED_1562 755addbf478e40677ba7ea79d01b8392 245 Pfam PF03734 L,D-transpeptidase catalytic domain 94 228 3.2E-10 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABED_1477 38cb821a63ea2196d54ddc292e59785b 129 Gene3D G3DSA:3.30.420.270 56 125 2.8E-10 T 14-10-2018 ABED_1477 38cb821a63ea2196d54ddc292e59785b 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 128 7.7E-26 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ABED_0254 bcb580801601ca36b36c5072ae3497dd 399 Pfam PF01618 MotA/TolQ/ExbB proton channel family 125 196 1.5E-6 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABED_0688 28524d58d2e50da4a5bb73e759b2c39f 273 Pfam PF00586 AIR synthase related protein, N-terminal domain 19 123 2.7E-18 T 14-10-2018 IPR016188 PurM-like, N-terminal domain ABED_0688 28524d58d2e50da4a5bb73e759b2c39f 273 SUPERFAMILY SSF56042 129 246 1.47E-12 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_0688 28524d58d2e50da4a5bb73e759b2c39f 273 Gene3D G3DSA:3.30.1330.10 3 128 9.6E-32 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_0688 28524d58d2e50da4a5bb73e759b2c39f 273 SUPERFAMILY SSF55326 16 123 1.74E-25 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABED_0688 28524d58d2e50da4a5bb73e759b2c39f 273 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 273 19.845 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ABED_0688 28524d58d2e50da4a5bb73e759b2c39f 273 Gene3D G3DSA:3.90.650.10 131 271 2.1E-15 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABED_1111 4cb31e63b66849309e9d3810976901ec 217 Pfam PF00156 Phosphoribosyl transferase domain 27 181 3.3E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABED_1111 4cb31e63b66849309e9d3810976901ec 217 Gene3D G3DSA:3.30.1310.20 60 123 1.8E-39 T 14-10-2018 ABED_1111 4cb31e63b66849309e9d3810976901ec 217 Gene3D G3DSA:3.40.50.2020 8 210 1.8E-39 T 14-10-2018 ABED_1111 4cb31e63b66849309e9d3810976901ec 217 SUPERFAMILY SSF53271 7 212 3.15E-28 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like ABED_1234 5e82675937362c5d559cc53f858e7891 192 SMART SM01007 8 186 2.7E-14 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal ABED_1234 5e82675937362c5d559cc53f858e7891 192 Gene3D G3DSA:3.40.225.10 3 188 2.0E-16 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABED_1234 5e82675937362c5d559cc53f858e7891 192 SUPERFAMILY SSF53639 6 185 1.04E-24 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABED_1234 5e82675937362c5d559cc53f858e7891 192 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 184 3.5E-17 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal ABED_0606 4066f79ba77a28362c17513c08eb8fe4 311 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 306 2.6E-94 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ABED_0606 4066f79ba77a28362c17513c08eb8fe4 311 Hamap MF_02086 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 304 50.447 T 14-10-2018 IPR037539 4-hydroxythreonine-4-phosphate dehydrogenase, epsilonproteobacteria KEGG: 00750+1.1.1.262 ABED_0606 4066f79ba77a28362c17513c08eb8fe4 311 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 303 2.4E-97 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ABED_0606 4066f79ba77a28362c17513c08eb8fe4 311 Gene3D G3DSA:3.40.718.10 3 310 8.5E-114 T 14-10-2018 ABED_0606 4066f79ba77a28362c17513c08eb8fe4 311 SUPERFAMILY SSF53659 6 309 2.34E-81 T 14-10-2018 ABED_0863 680f67af97b0b9750440b828739e91a9 433 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 15 259 2.1E-66 T 14-10-2018 IPR031489 D,L-carboxypeptidase, peptidase domain ABED_0863 680f67af97b0b9750440b828739e91a9 433 SUPERFAMILY SSF53187 32 259 1.32E-23 T 14-10-2018 ABED_0863 680f67af97b0b9750440b828739e91a9 433 Gene3D G3DSA:3.40.630.10 9 249 3.5E-28 T 14-10-2018 ABED_0863 680f67af97b0b9750440b828739e91a9 433 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 342 432 1.2E-19 T 14-10-2018 IPR033397 Metallo-carboxypeptidase, C-terminal domain ABED_0628 3ad509af0f40684fab89a48ffc4126bc 218 SUPERFAMILY SSF51161 71 193 6.93E-6 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_0628 3ad509af0f40684fab89a48ffc4126bc 218 Gene3D G3DSA:2.160.10.10 117 216 2.7E-6 T 14-10-2018 ABED_1218 a97b9862d9b54d19a286f9114a3b514f 915 Pfam PF05140 ResB-like family 194 284 2.0E-10 T 14-10-2018 IPR007816 ResB-like domain ABED_1218 a97b9862d9b54d19a286f9114a3b514f 915 Pfam PF05140 ResB-like family 76 148 3.8E-7 T 14-10-2018 IPR007816 ResB-like domain ABED_1218 a97b9862d9b54d19a286f9114a3b514f 915 Pfam PF01578 Cytochrome C assembly protein 673 875 1.7E-35 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ABED_1879 b0374a6d4238c0b43abf768ebfb2d2db 126 SUPERFAMILY SSF54593 2 124 4.51E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABED_1879 b0374a6d4238c0b43abf768ebfb2d2db 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 122 2.7E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABED_1879 b0374a6d4238c0b43abf768ebfb2d2db 126 Gene3D G3DSA:3.10.180.10 8 126 9.7E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABED_2099 e3d4d7ae9df7000324bc8d6aae321bf4 260 Pfam PF10670 Domain of unknown function (DUF4198) 21 235 2.3E-38 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 ABED_2116 b4f17f60f2c6d014172b7e20fd94a08f 260 SUPERFAMILY SSF161098 54 243 3.14E-24 T 14-10-2018 IPR035906 MetI-like superfamily ABED_2116 b4f17f60f2c6d014172b7e20fd94a08f 260 Gene3D G3DSA:1.10.3720.10 54 252 6.5E-21 T 14-10-2018 IPR035906 MetI-like superfamily ABED_2116 b4f17f60f2c6d014172b7e20fd94a08f 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 251 4.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_0201 474b70eeecad4a902ec4d2163389a0eb 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 314 1.1E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABED_0201 474b70eeecad4a902ec4d2163389a0eb 319 Gene3D G3DSA:1.10.3720.10 85 311 2.1E-17 T 14-10-2018 IPR035906 MetI-like superfamily ABED_0201 474b70eeecad4a902ec4d2163389a0eb 319 SUPERFAMILY SSF161098 89 300 1.14E-16 T 14-10-2018 IPR035906 MetI-like superfamily ABED_1485 661ecfa3200a814912905e5414f27224 140 Pfam PF00430 ATP synthase B/B' CF(0) 14 122 5.8E-16 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABED_0506 3c1935bbb9c0f6e2a5fdb8561a92b1d4 399 Pfam PF02646 RmuC family 93 389 7.0E-102 T 14-10-2018 IPR003798 DNA recombination RmuC ABED_1102 89b43ee91b520ac4853ebc423e7f9d6e 146 Gene3D G3DSA:1.10.287.130 49 128 6.2E-13 T 14-10-2018 ABED_1102 89b43ee91b520ac4853ebc423e7f9d6e 146 SUPERFAMILY SSF158472 55 102 2.35E-6 T 14-10-2018 ABED_1602 9d6a16e40d978b18b11b8f5b3759ee9a 241 SUPERFAMILY SSF56317 2 234 3.01E-41 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABED_1602 9d6a16e40d978b18b11b8f5b3759ee9a 241 Gene3D G3DSA:3.60.110.10 1 238 6.2E-43 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABED_1602 9d6a16e40d978b18b11b8f5b3759ee9a 241 Pfam PF00795 Carbon-nitrogen hydrolase 7 230 1.4E-23 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ABED_2071 9c22282d8389c3b40bf2dff967041694 209 PIRSF PIRSF028688 1 190 2.8E-24 T 14-10-2018 IPR014549 Flagellar protein FlgO ABED_1081 27b9c74a75ccd70458a1a251bb603296 81 SMART SM00530 20 78 1.1E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_1081 27b9c74a75ccd70458a1a251bb603296 81 SUPERFAMILY SSF47413 14 80 1.15E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABED_1081 27b9c74a75ccd70458a1a251bb603296 81 Pfam PF01381 Helix-turn-helix 21 76 2.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABED_1081 27b9c74a75ccd70458a1a251bb603296 81 Gene3D G3DSA:1.10.260.40 8 81 2.2E-14 T 14-10-2018 ABED_1413 143b8c82bcddc49d293e3566d4a60b70 192 Pfam PF11655 Protein of unknown function (DUF2589) 10 172 1.0E-38 T 14-10-2018 IPR024510 Protein of unknown function DUF2589 ABED_1071 53bdcfc0c05a7a9fae499b4ae123611d 579 SUPERFAMILY SSF50182 353 433 3.92E-7 T 14-10-2018 IPR010920 LSM domain superfamily ABED_1071 53bdcfc0c05a7a9fae499b4ae123611d 579 Pfam PF00924 Mechanosensitive ion channel 309 532 4.9E-35 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABED_1349 a66220b64b45463b9e91dc56c486b9a0 827 Pfam PF03176 MMPL family 217 424 1.7E-15 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ABED_1349 a66220b64b45463b9e91dc56c486b9a0 827 Pfam PF03176 MMPL family 665 815 1.8E-7 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ABED_1349 a66220b64b45463b9e91dc56c486b9a0 827 SUPERFAMILY SSF82866 260 415 7.46E-28 T 14-10-2018 ABED_1349 a66220b64b45463b9e91dc56c486b9a0 827 SUPERFAMILY SSF82866 633 824 1.31E-28 T 14-10-2018 ABED_1349 a66220b64b45463b9e91dc56c486b9a0 827 Gene3D G3DSA:1.20.1640.10 222 427 2.2E-9 T 14-10-2018 ABED_1349 a66220b64b45463b9e91dc56c486b9a0 827 Gene3D G3DSA:1.20.1640.10 633 826 7.2E-15 T 14-10-2018 ABED_0993 ed36c63547136e5bc36bc4a50916ffd7 289 Pfam PF00892 EamA-like transporter family 8 134 4.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_0993 ed36c63547136e5bc36bc4a50916ffd7 289 Pfam PF00892 EamA-like transporter family 149 285 1.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_0993 ed36c63547136e5bc36bc4a50916ffd7 289 SUPERFAMILY SSF103481 40 137 2.35E-8 T 14-10-2018 ABED_2022 39bdfc3d75c58c6210ed6c2a439f0f8a 231 Pfam PF04085 rod shape-determining protein MreC 100 211 3.7E-13 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ABED_2022 39bdfc3d75c58c6210ed6c2a439f0f8a 231 Gene3D G3DSA:2.40.10.350 126 200 2.3E-13 T 14-10-2018 ABED_0812 4d251f3902cfdffee872741444f5b9ba 186 Gene3D G3DSA:3.40.50.300 15 169 1.1E-10 T 14-10-2018 ABED_0812 4d251f3902cfdffee872741444f5b9ba 186 SUPERFAMILY SSF52540 20 154 1.33E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0632 83667056dbd670820aea46420b81dcf2 600 Gene3D G3DSA:3.40.50.2000 413 559 1.1E-5 T 14-10-2018 ABED_0632 83667056dbd670820aea46420b81dcf2 600 Gene3D G3DSA:3.40.50.2000 263 412 1.1E-5 T 14-10-2018 ABED_0632 83667056dbd670820aea46420b81dcf2 600 SUPERFAMILY SSF53756 295 575 8.07E-14 T 14-10-2018 ABED_1586 5eb9668d037dae4441da803f32a1fea2 452 SUPERFAMILY SSF46626 323 452 2.12E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_1586 5eb9668d037dae4441da803f32a1fea2 452 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 37 452 3.9E-103 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase ABED_1586 5eb9668d037dae4441da803f32a1fea2 452 PIRSF PIRSF028099 13 452 2.6E-131 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase ABED_1586 5eb9668d037dae4441da803f32a1fea2 452 Gene3D G3DSA:1.10.760.10 315 452 7.3E-6 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_2132 410ed25cbda28d078f8471eb97447560 398 Pfam PF04143 Sulphur transport 240 390 3.5E-24 T 14-10-2018 IPR007272 Sulphur transport domain ABED_2132 410ed25cbda28d078f8471eb97447560 398 Pfam PF04143 Sulphur transport 5 161 1.4E-25 T 14-10-2018 IPR007272 Sulphur transport domain ABED_0067 38d7905b5e1e6e02ebf56755c867e25d 442 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 5 173 1.2E-11 T 14-10-2018 ABED_0067 38d7905b5e1e6e02ebf56755c867e25d 442 Pfam PF05670 Domain of unknown function (DUF814) 343 423 1.7E-16 T 14-10-2018 IPR008532 Domain of unknown function DUF814 ABED_0067 38d7905b5e1e6e02ebf56755c867e25d 442 Gene3D G3DSA:2.30.310.10 2 157 1.3E-17 T 14-10-2018 ABED_2119 51f7acada857edd1e043cba177b02297 386 Gene3D G3DSA:3.20.20.30 1 367 6.8E-134 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABED_2119 51f7acada857edd1e043cba177b02297 386 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 357 1.7E-170 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 ABED_2119 51f7acada857edd1e043cba177b02297 386 Pfam PF00296 Luciferase-like monooxygenase 4 333 8.8E-78 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABED_2119 51f7acada857edd1e043cba177b02297 386 SUPERFAMILY SSF51679 3 358 3.14E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABED_1381 98a7d30ce215101c70e71a165338dc34 541 Gene3D G3DSA:1.10.490.140 140 253 6.8E-6 T 14-10-2018 ABED_1381 98a7d30ce215101c70e71a165338dc34 541 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 10 389 1.1E-64 T 14-10-2018 IPR003776 YcaO-like domain ABED_1381 98a7d30ce215101c70e71a165338dc34 541 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 57 377 2.4E-59 T 14-10-2018 IPR003776 YcaO-like domain ABED_1190 bdb5993104448f1e8348fdb56fc3e292 138 SUPERFAMILY SSF52540 25 106 8.75E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1190 bdb5993104448f1e8348fdb56fc3e292 138 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 18 129 2.9E-22 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ABED_1190 bdb5993104448f1e8348fdb56fc3e292 138 Gene3D G3DSA:3.40.50.300 6 138 9.1E-25 T 14-10-2018 ABED_1190 bdb5993104448f1e8348fdb56fc3e292 138 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 15 136 9.6E-28 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ABED_1812 e26e334ec7591bb8e76f59d7e0223e48 335 Gene3D G3DSA:3.40.190.10 121 332 1.9E-119 T 14-10-2018 ABED_1812 e26e334ec7591bb8e76f59d7e0223e48 335 Pfam PF13343 Bacterial extracellular solute-binding protein 69 300 1.0E-24 T 14-10-2018 ABED_1812 e26e334ec7591bb8e76f59d7e0223e48 335 SUPERFAMILY SSF53850 21 328 4.25E-77 T 14-10-2018 ABED_1812 e26e334ec7591bb8e76f59d7e0223e48 335 Gene3D G3DSA:3.40.190.10 23 298 1.9E-119 T 14-10-2018 ABED_1812 e26e334ec7591bb8e76f59d7e0223e48 335 PIRSF PIRSF002825 16 335 2.9E-82 T 14-10-2018 IPR026045 Ferric binding protein ABED_0511 be64a88c9839350ac9bd996118a996ae 166 Pfam PF04463 Protein of unknown function (DUF523) 3 152 3.5E-42 T 14-10-2018 IPR007553 Domain of unknown function DUF523 ABED_0281 a9045d7282682604a7034bbefd8fe1a8 783 SUPERFAMILY SSF52540 172 433 2.26E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0281 a9045d7282682604a7034bbefd8fe1a8 783 Pfam PF00350 Dynamin family 191 389 1.5E-28 T 14-10-2018 IPR022812 Dynamin superfamily ABED_0387 55e895317745b4514a823acdc16360d7 313 SUPERFAMILY SSF56219 2 313 1.22E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABED_0387 55e895317745b4514a823acdc16360d7 313 Gene3D G3DSA:3.60.10.10 1 312 2.4E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABED_0387 55e895317745b4514a823acdc16360d7 313 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 304 2.6E-12 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ABED_0177 30efc688ec2529f8cd28bf498dd7668d 208 SUPERFAMILY SSF69593 7 187 9.94E-28 T 14-10-2018 ABED_0177 30efc688ec2529f8cd28bf498dd7668d 208 SMART SM00563 38 159 2.0E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABED_0177 30efc688ec2529f8cd28bf498dd7668d 208 Pfam PF01553 Acyltransferase 24 156 1.7E-21 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABED_1084 d6e95278ab2a2e373ce51244d0dab03c 197 SUPERFAMILY SSF46626 136 189 7.13E-6 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0351 acc982462e9ada5f0919aed022f816fb 269 Gene3D G3DSA:1.10.8.1040 23 81 2.8E-10 T 14-10-2018 ABED_0351 acc982462e9ada5f0919aed022f816fb 269 SUPERFAMILY SSF109998 25 155 5.49E-18 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABED_0351 acc982462e9ada5f0919aed022f816fb 269 Gene3D G3DSA:3.10.50.40 127 229 1.9E-29 T 14-10-2018 ABED_0351 acc982462e9ada5f0919aed022f816fb 269 Pfam PF13616 PPIC-type PPIASE domain 127 225 1.8E-17 T 14-10-2018 ABED_0351 acc982462e9ada5f0919aed022f816fb 269 SUPERFAMILY SSF54534 123 223 9.81E-22 T 14-10-2018 ABED_0659 9e38c6b8b392de5b15a96fa7df26ea0a 403 Pfam PF12704 MacB-like periplasmic core domain 20 242 1.4E-34 T 14-10-2018 IPR025857 MacB-like periplasmic core domain ABED_0659 9e38c6b8b392de5b15a96fa7df26ea0a 403 Pfam PF02687 FtsX-like permease family 309 396 2.6E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABED_0487 821d0d55d7d5545dc4091009c2a62c93 92 SUPERFAMILY SSF117916 2 85 6.76E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABED_0487 821d0d55d7d5545dc4091009c2a62c93 92 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 19 81 1.0E-15 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ABED_0487 821d0d55d7d5545dc4091009c2a62c93 92 Pfam PF01106 NifU-like domain 13 78 4.4E-21 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ABED_0487 821d0d55d7d5545dc4091009c2a62c93 92 Gene3D G3DSA:3.30.300.130 2 90 1.1E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABED_1109 506af3a004c86a118bc681286366a045 145 Pfam PF06271 RDD family 10 137 1.3E-23 T 14-10-2018 IPR010432 RDD ABED_0327 31fd96de7072dd1091edd9f4d1462c14 127 Pfam PF03927 NapD protein 1 74 9.2E-20 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly ABED_0327 31fd96de7072dd1091edd9f4d1462c14 127 Gene3D G3DSA:3.30.70.920 1 69 2.1E-8 T 14-10-2018 ABED_0327 31fd96de7072dd1091edd9f4d1462c14 127 Hamap MF_02200 Chaperone NapD [napD]. 1 77 16.486 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly ABED_2085 95499dba8fb8bfc600c6de93e1561ea9 159 Pfam PF06271 RDD family 28 150 1.5E-14 T 14-10-2018 IPR010432 RDD ABED_1405 05bfa0279a54fbca3813a4e89566118d 108 Pfam PF02411 MerT mercuric transport protein 2 106 2.0E-8 T 14-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 ABED_2028 ae53762a92eb26850f99480d597eb530 357 Pfam PF02677 Uncharacterized BCR, COG1636 1 175 4.7E-56 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 ABED_2028 ae53762a92eb26850f99480d597eb530 357 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 1 178 32.423 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 ABED_1274 00bb0a3156d35890a04dda768ea0b940 362 Pfam PF12698 ABC-2 family transporter protein 23 355 2.0E-42 T 14-10-2018 ABED_1146 c2be9946fe849a839151e38568019d4c 91 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 15 86 3.9E-8 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 ABED_0191 f28d3c26ca0ecfef9b639863ec4f99bf 175 Pfam PF03748 Flagellar basal body-associated protein FliL 77 174 6.0E-17 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 ABED_1129 f8926f96ec7896220eb47bca56f52d58 183 Pfam PF12163 DNA replication regulator 2 181 1.3E-72 T 14-10-2018 IPR021011 DNA replication regulator, HobA ABED_1129 f8926f96ec7896220eb47bca56f52d58 183 Gene3D G3DSA:3.40.50.11670 1 181 9.5E-61 T 14-10-2018 IPR038381 DNA replication regulator HobA superfamily ABED_1510 46359b8b0cd91612da2544884c18211a 192 Hamap MF_00052_B Ribonuclease HII [rnhB]. 3 178 32.287 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 ABED_1510 46359b8b0cd91612da2544884c18211a 192 Pfam PF01351 Ribonuclease HII 5 177 7.7E-35 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain ABED_1510 46359b8b0cd91612da2544884c18211a 192 SUPERFAMILY SSF53098 3 177 3.64E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily ABED_1510 46359b8b0cd91612da2544884c18211a 192 Gene3D G3DSA:3.30.420.10 1 190 7.2E-67 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABED_0090 345d1d9876ba3077580ffe1588ca6b37 222 Gene3D G3DSA:1.20.58.220 124 218 1.3E-9 T 14-10-2018 IPR038078 PhoU-like domain superfamily ABED_0090 345d1d9876ba3077580ffe1588ca6b37 222 Gene3D G3DSA:1.20.58.220 1 109 1.1E-16 T 14-10-2018 IPR038078 PhoU-like domain superfamily ABED_0090 345d1d9876ba3077580ffe1588ca6b37 222 Pfam PF01895 PhoU domain 18 103 1.5E-6 T 14-10-2018 IPR026022 PhoU domain ABED_0090 345d1d9876ba3077580ffe1588ca6b37 222 Pfam PF01895 PhoU domain 132 209 2.0E-7 T 14-10-2018 IPR026022 PhoU domain ABED_0090 345d1d9876ba3077580ffe1588ca6b37 222 SUPERFAMILY SSF109755 3 217 4.6E-31 T 14-10-2018 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 481 84.662 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 SUPERFAMILY SSF54631 72 201 1.17E-33 T 14-10-2018 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 SUPERFAMILY SSF51412 2 472 4.71E-119 T 14-10-2018 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 449 1.7E-190 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 PIRSF PIRSF000130 1 481 9.5E-207 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 Gene3D G3DSA:3.20.20.70 1 481 5.2E-215 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 468 2.0E-159 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 290 302 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 Pfam PF00571 CBS domain 93 138 1.7E-11 T 14-10-2018 IPR000644 CBS domain ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 Pfam PF00571 CBS domain 152 199 3.6E-10 T 14-10-2018 IPR000644 CBS domain ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 SMART SM00116 156 204 1.3E-11 T 14-10-2018 IPR000644 CBS domain ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 SMART SM00116 95 143 2.1E-10 T 14-10-2018 IPR000644 CBS domain ABED_0969 30a978ac3ddbea16e4261adce00e0dcf 481 SMART SM01240 6 468 0.0 T 14-10-2018 ABED_1950 4baf225d0b52f9ea55137d87f7013b9b 544 Pfam PF13387 Domain of unknown function (DUF4105) 118 283 9.4E-42 T 14-10-2018 IPR025178 Domain of unknown function DUF4105 ABED_0250 d719d12a66234d5e7e3c9e251b269325 163 Pfam PF01863 Protein of unknown function DUF45 89 150 2.5E-11 T 14-10-2018 IPR002725 Protein of unknown function DUF45 ABED_0250 d719d12a66234d5e7e3c9e251b269325 163 Gene3D G3DSA:3.30.2010.10 70 159 5.9E-8 T 14-10-2018 ABED_0388 d2d28d5cd1590adb2211fc24597df97f 148 Pfam PF07813 LTXXQ motif family protein 57 136 1.0E-5 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 ABED_0388 d2d28d5cd1590adb2211fc24597df97f 148 Gene3D G3DSA:1.20.120.1490 53 148 2.9E-9 T 14-10-2018 ABED_0696 9014e75c49af882cd1e5cbadd67dac8f 162 SUPERFAMILY SSF54197 1 150 1.35E-39 T 14-10-2018 IPR036265 HIT-like superfamily ABED_0696 9014e75c49af882cd1e5cbadd67dac8f 162 Pfam PF01230 HIT domain 35 125 1.3E-11 T 14-10-2018 IPR001310 Histidine triad (HIT) protein ABED_0696 9014e75c49af882cd1e5cbadd67dac8f 162 Gene3D G3DSA:3.30.428.10 1 160 1.7E-47 T 14-10-2018 IPR036265 HIT-like superfamily ABED_0243 577db0f0d04c3a99337c08f959f62cd4 773 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 88 767 1.6E-243 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase ABED_0598 f83d199bc9fcb6aa13e91c4cf3ad7667 148 Gene3D G3DSA:3.90.79.10 4 148 1.6E-16 T 14-10-2018 ABED_0598 f83d199bc9fcb6aa13e91c4cf3ad7667 148 Pfam PF00293 NUDIX domain 9 130 6.6E-7 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABED_0598 f83d199bc9fcb6aa13e91c4cf3ad7667 148 SUPERFAMILY SSF55811 7 129 8.8E-14 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABED_1845 ea3d618bdbbc702dd038ee9fe251b893 461 Pfam PF01551 Peptidase family M23 340 433 2.6E-20 T 14-10-2018 IPR016047 Peptidase M23 ABED_1845 ea3d618bdbbc702dd038ee9fe251b893 461 Gene3D G3DSA:2.70.70.10 277 440 2.8E-29 T 14-10-2018 IPR011055 Duplicated hybrid motif ABED_1845 ea3d618bdbbc702dd038ee9fe251b893 461 SUPERFAMILY SSF51261 245 437 8.37E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif ABED_1253 877fbfc695c180b6ce69d82960d1b1e7 79 SUPERFAMILY SSF46955 25 74 1.72E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily ABED_1293 b2bce4375b137011a011cefa9630dc51 563 Pfam PF02120 Flagellar hook-length control protein FliK 457 523 2.5E-7 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal ABED_1965 06c01f990aa2b90bc09730f1039d4aec 137 SUPERFAMILY SSF46785 4 102 2.02E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1965 06c01f990aa2b90bc09730f1039d4aec 137 Pfam PF02082 Transcriptional regulator 4 83 2.7E-26 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type ABED_1965 06c01f990aa2b90bc09730f1039d4aec 137 Gene3D G3DSA:1.10.10.10 3 137 2.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1965 06c01f990aa2b90bc09730f1039d4aec 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 98 1.1E-29 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type ABED_0971 5b67e745387d3835eb0f9d991e771a75 165 Pfam PF13274 Protein of unknown function (DUF4065) 31 147 1.0E-7 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 ABED_2155 8c32be0c06b4e86e725213fdbc2c8def 205 Pfam PF03458 UPF0126 domain 94 166 3.6E-21 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 ABED_2155 8c32be0c06b4e86e725213fdbc2c8def 205 Pfam PF03458 UPF0126 domain 6 78 3.5E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 Pfam PF12796 Ankyrin repeats (3 copies) 52 136 8.5E-10 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain ABED_0182 f8c7541086d016f284d866e24ffd8424 644 Pfam PF12796 Ankyrin repeats (3 copies) 477 546 5.8E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SUPERFAMILY SSF48403 270 588 4.46E-35 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SUPERFAMILY SSF48403 34 370 4.02E-35 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_0182 f8c7541086d016f284d866e24ffd8424 644 Gene3D G3DSA:1.25.40.20 5 390 2.1E-53 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_0182 f8c7541086d016f284d866e24ffd8424 644 Gene3D G3DSA:1.25.40.20 391 640 9.3E-27 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 496 525 0.0093 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 213 244 1200.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 80 109 0.069 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 563 592 230.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 47 76 97.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 420 449 3500.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 294 323 310.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 453 492 4200.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 329 360 160.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 146 176 13.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 248 290 1200.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 529 559 1300.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 180 209 590.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_0182 f8c7541086d016f284d866e24ffd8424 644 SMART SM00248 113 142 46.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABED_1478 36841dadee09091fd7f7eef6bc5eed3a 186 Pfam PF01618 MotA/TolQ/ExbB proton channel family 88 172 2.1E-27 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABED_1378 565bd40cfbcc5ab8e70b423e6c52c230 282 SUPERFAMILY SSF74650 3 281 4.24E-49 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ABED_1378 565bd40cfbcc5ab8e70b423e6c52c230 282 Gene3D G3DSA:2.70.98.10 2 282 7.1E-96 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ABED_1378 565bd40cfbcc5ab8e70b423e6c52c230 282 Pfam PF01263 Aldose 1-epimerase 3 248 7.7E-29 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ABED_1012 cfd083894c9fbf000288c179b6f46fe3 298 SUPERFAMILY SSF103481 42 141 7.85E-12 T 14-10-2018 ABED_1012 cfd083894c9fbf000288c179b6f46fe3 298 Pfam PF00892 EamA-like transporter family 11 141 3.3E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_1012 cfd083894c9fbf000288c179b6f46fe3 298 Pfam PF00892 EamA-like transporter family 158 288 1.4E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABED_1012 cfd083894c9fbf000288c179b6f46fe3 298 SUPERFAMILY SSF103481 194 292 4.45E-11 T 14-10-2018 ABED_1866 0b9ac06c24a71615ca84933fa633cc5a 254 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 251 43.03 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ABED_1866 0b9ac06c24a71615ca84933fa633cc5a 254 Pfam PF13394 4Fe-4S single cluster domain 24 156 9.2E-28 T 14-10-2018 ABED_1866 0b9ac06c24a71615ca84933fa633cc5a 254 Gene3D G3DSA:3.20.20.70 2 239 7.0E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABED_1866 0b9ac06c24a71615ca84933fa633cc5a 254 PIRSF PIRSF000370 1 38 1.2E-11 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ABED_1866 0b9ac06c24a71615ca84933fa633cc5a 254 PIRSF PIRSF000370 48 254 1.2E-20 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ABED_1866 0b9ac06c24a71615ca84933fa633cc5a 254 SUPERFAMILY SSF102114 67 214 4.9E-8 T 14-10-2018 ABED_1996 3e2a8d5e7c8e612e83b7b23596020fe4 187 Pfam PF01478 Type IV leader peptidase family 33 149 1.1E-11 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 ABED_0367 92aead187c2c2cadd212e4a32c889b20 599 Pfam PF13387 Domain of unknown function (DUF4105) 121 287 1.9E-57 T 14-10-2018 IPR025178 Domain of unknown function DUF4105 ABED_1899 e7070180ee3bfbb074110ec30bb5aa85 238 PIRSF PIRSF029033 1 238 5.0E-88 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein ABED_1899 e7070180ee3bfbb074110ec30bb5aa85 238 Pfam PF04402 Protein of unknown function (DUF541) 43 209 6.5E-20 T 14-10-2018 IPR007497 Protein of unknown function DUF541 ABED_1899 e7070180ee3bfbb074110ec30bb5aa85 238 Gene3D G3DSA:3.30.70.2970 55 154 2.0E-5 T 14-10-2018 ABED_1947 20c4b8ecf90cb6d2ab413d951df0dad6 304 Gene3D G3DSA:3.10.310.50 19 162 5.5E-51 T 14-10-2018 ABED_1947 20c4b8ecf90cb6d2ab413d951df0dad6 304 Pfam PF04536 TPM domain 30 153 2.6E-38 T 14-10-2018 IPR007621 TPM domain ABED_0125 bbe097b94c0e5c3cd04a8a79e3694c1c 370 PIRSF PIRSF000524 1 365 1.1E-97 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 ABED_0125 bbe097b94c0e5c3cd04a8a79e3694c1c 370 Gene3D G3DSA:3.90.1150.10 6 350 2.5E-91 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABED_0125 bbe097b94c0e5c3cd04a8a79e3694c1c 370 Pfam PF00266 Aminotransferase class-V 2 316 7.0E-28 T 14-10-2018 IPR000192 Aminotransferase class V domain ABED_0125 bbe097b94c0e5c3cd04a8a79e3694c1c 370 Gene3D G3DSA:3.40.640.10 11 249 2.5E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABED_0125 bbe097b94c0e5c3cd04a8a79e3694c1c 370 SUPERFAMILY SSF53383 2 349 1.1E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABED_0125 bbe097b94c0e5c3cd04a8a79e3694c1c 370 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 174 194 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABED_1150 0fdeb097b21a986de2a3f95db914b120 671 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 536 8.5E-183 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1150 0fdeb097b21a986de2a3f95db914b120 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 4.9E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1150 0fdeb097b21a986de2a3f95db914b120 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 4.9E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1150 0fdeb097b21a986de2a3f95db914b120 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 4.9E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1150 0fdeb097b21a986de2a3f95db914b120 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 388 407 4.9E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1150 0fdeb097b21a986de2a3f95db914b120 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 4.9E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1150 0fdeb097b21a986de2a3f95db914b120 671 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 669 2.2E-211 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1150 0fdeb097b21a986de2a3f95db914b120 671 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 669 23.124 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABED_1711 80713e406e56aa9312351a6970fd1dae 60 Gene3D G3DSA:1.20.5.1030 1 58 3.8E-10 T 14-10-2018 IPR038379 SecE superfamily ABED_1711 80713e406e56aa9312351a6970fd1dae 60 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 11.002 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_1711 80713e406e56aa9312351a6970fd1dae 60 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 52 1.1E-10 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ABED_1711 80713e406e56aa9312351a6970fd1dae 60 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 5 53 1.3E-9 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABED_0756 e688d4081bc2fe8cc6d0095fa97995f2 443 Pfam PF03109 ABC1 family 29 131 1.0E-24 T 14-10-2018 IPR004147 UbiB domain ABED_0756 e688d4081bc2fe8cc6d0095fa97995f2 443 SMART SM00220 34 324 0.0047 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABED_0756 e688d4081bc2fe8cc6d0095fa97995f2 443 SUPERFAMILY SSF56112 38 275 4.86E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily ABED_0756 e688d4081bc2fe8cc6d0095fa97995f2 443 Gene3D G3DSA:1.10.510.10 165 400 1.6E-8 T 14-10-2018 ABED_0176 667a718d82be64f054ad35a18d2b8e37 310 Pfam PF01148 Cytidylyltransferase family 44 307 5.6E-63 T 14-10-2018 ABED_0176 667a718d82be64f054ad35a18d2b8e37 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 ABED_1473 f1c97bccad2adcfd05a1ed4d04b368db 313 Pfam PF13174 Tetratricopeptide repeat 270 300 0.0068 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABED_1473 f1c97bccad2adcfd05a1ed4d04b368db 313 SUPERFAMILY SSF48452 199 308 9.76E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1473 f1c97bccad2adcfd05a1ed4d04b368db 313 Gene3D G3DSA:1.25.40.10 189 313 1.9E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_1720 f988157e4123a3c89aa9a71b103c1bd9 263 SUPERFAMILY SSF89550 2 263 1.02E-47 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABED_1720 f988157e4123a3c89aa9a71b103c1bd9 263 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 239 1.8E-49 T 14-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 ABED_1720 f988157e4123a3c89aa9a71b103c1bd9 263 Pfam PF02811 PHP domain 4 193 1.5E-12 T 14-10-2018 IPR004013 PHP domain GO:0003824 ABED_1720 f988157e4123a3c89aa9a71b103c1bd9 263 Gene3D G3DSA:3.20.20.140 3 263 6.5E-73 T 14-10-2018 ABED_0623 632e61b97d51fdd371097057d5534722 237 SUPERFAMILY SSF53448 6 235 1.1E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_0623 632e61b97d51fdd371097057d5534722 237 Pfam PF02348 Cytidylyltransferase 9 201 6.9E-32 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 ABED_0623 632e61b97d51fdd371097057d5534722 237 Gene3D G3DSA:3.90.550.10 4 235 3.7E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABED_2129 71d3e92f8b6ecf84fc4e7265755b6621 222 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 8 212 5.1E-15 T 14-10-2018 IPR007296 Domain of unknown function DUF403 ABED_0100 199707011db11881e86a56488acb8678 302 Pfam PF02470 MlaD protein 40 116 2.4E-12 T 14-10-2018 IPR003399 Mce/MlaD ABED_0861 032f383bcdeb2fe98d60f4bcb1d4a850 233 Gene3D G3DSA:3.40.50.1820 1 231 5.7E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_0861 032f383bcdeb2fe98d60f4bcb1d4a850 233 Pfam PF00561 alpha/beta hydrolase fold 56 102 2.4E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABED_0861 032f383bcdeb2fe98d60f4bcb1d4a850 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 74 9.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABED_0861 032f383bcdeb2fe98d60f4bcb1d4a850 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 9.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABED_0861 032f383bcdeb2fe98d60f4bcb1d4a850 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 176 190 9.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABED_0861 032f383bcdeb2fe98d60f4bcb1d4a850 233 SUPERFAMILY SSF53474 5 231 3.3E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_0505 533b62f41b49bc80d905c221ed619e08 406 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 37 193 3.0E-28 T 14-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 ABED_0505 533b62f41b49bc80d905c221ed619e08 406 Pfam PF01435 Peptidase family M48 197 395 2.4E-41 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ABED_0505 533b62f41b49bc80d905c221ed619e08 406 Gene3D G3DSA:3.30.2010.10 192 274 1.7E-29 T 14-10-2018 ABED_2118 381dcc869a8a7e1ec17a5971e7a6de54 324 Gene3D G3DSA:3.40.190.10 20 131 4.4E-11 T 14-10-2018 ABED_2118 381dcc869a8a7e1ec17a5971e7a6de54 324 SUPERFAMILY SSF53850 26 262 1.45E-29 T 14-10-2018 ABED_2118 381dcc869a8a7e1ec17a5971e7a6de54 324 Pfam PF13379 NMT1-like family 21 261 1.4E-18 T 14-10-2018 ABED_2118 381dcc869a8a7e1ec17a5971e7a6de54 324 Gene3D G3DSA:3.40.190.10 132 315 5.1E-17 T 14-10-2018 ABED_1786 5e1c4c3d29c42c6c9e31d4f775e85228 241 Pfam PF02591 C4-type zinc ribbon domain 198 230 4.0E-11 T 14-10-2018 IPR003743 C4-type zinc ribbon domain ABED_0683 96b7eaaead8bd8c7af0e2cdf79489cd7 274 Pfam PF08668 HDOD domain 13 208 1.8E-34 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD ABED_0683 96b7eaaead8bd8c7af0e2cdf79489cd7 274 SUPERFAMILY SSF109604 4 265 1.57E-45 T 14-10-2018 ABED_0683 96b7eaaead8bd8c7af0e2cdf79489cd7 274 Gene3D G3DSA:1.10.3210.10 2 274 2.3E-54 T 14-10-2018 ABED_1587 015b4df69c377edc82ac5435e304785d 451 Gene3D G3DSA:1.20.1420.20 16 429 2.9E-72 T 14-10-2018 IPR038352 Imelysin-like domain superfamily ABED_1587 015b4df69c377edc82ac5435e304785d 451 Pfam PF09375 Imelysin 50 426 1.2E-77 T 14-10-2018 IPR018976 Imelysin-like domain ABED_0321 788aa61e2195c26a5d8cc3e5440af445 1021 Pfam PF05140 ResB-like family 327 398 3.3E-10 T 14-10-2018 IPR007816 ResB-like domain ABED_0321 788aa61e2195c26a5d8cc3e5440af445 1021 Pfam PF01578 Cytochrome C assembly protein 778 984 1.6E-37 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ABED_1550 387d4262f2d4562c3bb722a947b5d1df 80 Pfam PF13541 Subunit ChlI of Mg-chelatase 19 60 3.2E-9 T 14-10-2018 ABED_1913 17c8c836e880b5e89ac3904783655051 327 SUPERFAMILY SSF50978 105 315 1.37E-8 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 ABED_0171 07dba04396a67d17150662eeb77aee54 134 Pfam PF03994 Domain of Unknown Function (DUF350) 78 132 1.1E-8 T 14-10-2018 IPR007140 Protein of unknown function DUF350 ABED_0171 07dba04396a67d17150662eeb77aee54 134 Pfam PF03994 Domain of Unknown Function (DUF350) 12 66 3.7E-11 T 14-10-2018 IPR007140 Protein of unknown function DUF350 ABED_1444 dfb6a5a3eb46d70f6d180290fc69a3ea 198 Pfam PF04403 Paraquat-inducible protein A 48 196 4.3E-29 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like ABED_0245 a7550122583373a5d4458c30471bfccb 319 PRINTS PR00095 Anthranilate synthase component I signature 257 271 2.7E-6 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_0245 a7550122583373a5d4458c30471bfccb 319 PRINTS PR00095 Anthranilate synthase component I signature 159 172 2.7E-6 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_0245 a7550122583373a5d4458c30471bfccb 319 PRINTS PR00095 Anthranilate synthase component I signature 173 186 2.7E-6 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABED_0245 a7550122583373a5d4458c30471bfccb 319 Pfam PF00425 chorismate binding enzyme 68 314 2.2E-60 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABED_0245 a7550122583373a5d4458c30471bfccb 319 Gene3D G3DSA:3.60.120.10 2 318 2.0E-70 T 14-10-2018 IPR005801 ADC synthase GO:0009058 ABED_0245 a7550122583373a5d4458c30471bfccb 319 SUPERFAMILY SSF56322 45 316 1.09E-64 T 14-10-2018 IPR005801 ADC synthase GO:0009058 ABED_0774 e86b18369c6225b8e6ead03d06a044fb 435 SUPERFAMILY SSF48452 125 235 9.32E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0774 e86b18369c6225b8e6ead03d06a044fb 435 Gene3D G3DSA:1.25.40.10 27 426 1.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_2124 69e6956c258d3cac69daa21428fde4aa 384 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 357 2.3E-165 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 ABED_2124 69e6956c258d3cac69daa21428fde4aa 384 Gene3D G3DSA:3.20.20.30 1 368 8.1E-132 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABED_2124 69e6956c258d3cac69daa21428fde4aa 384 Pfam PF00296 Luciferase-like monooxygenase 4 333 2.9E-79 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABED_2124 69e6956c258d3cac69daa21428fde4aa 384 SUPERFAMILY SSF51679 3 360 8.9E-89 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABED_0437 c0a584b00c607b40974b8dcc0082bd50 406 Pfam PF02321 Outer membrane efflux protein 20 203 3.4E-16 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0437 c0a584b00c607b40974b8dcc0082bd50 406 Pfam PF02321 Outer membrane efflux protein 229 397 2.0E-15 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ABED_0437 c0a584b00c607b40974b8dcc0082bd50 406 SUPERFAMILY SSF56954 18 400 1.44E-40 T 14-10-2018 ABED_0437 c0a584b00c607b40974b8dcc0082bd50 406 Gene3D G3DSA:1.20.1600.10 12 402 8.2E-39 T 14-10-2018 ABED_0871 bed9b7a365c8cfeda14f67154a130929 138 Pfam PF05258 Protein of unknown function (DUF721) 4 88 2.6E-4 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 ABED_0358 337752a426291735404113cf2fbcf842 169 Gene3D G3DSA:3.40.50.300 1 169 2.6E-45 T 14-10-2018 ABED_0358 337752a426291735404113cf2fbcf842 169 PRINTS PR01100 Shikimate kinase family signature 58 66 6.4E-18 T 14-10-2018 ABED_0358 337752a426291735404113cf2fbcf842 169 PRINTS PR01100 Shikimate kinase family signature 6 21 6.4E-18 T 14-10-2018 ABED_0358 337752a426291735404113cf2fbcf842 169 PRINTS PR01100 Shikimate kinase family signature 94 111 6.4E-18 T 14-10-2018 ABED_0358 337752a426291735404113cf2fbcf842 169 PRINTS PR01100 Shikimate kinase family signature 77 86 6.4E-18 T 14-10-2018 ABED_0358 337752a426291735404113cf2fbcf842 169 PRINTS PR01100 Shikimate kinase family signature 30 43 6.4E-18 T 14-10-2018 ABED_0358 337752a426291735404113cf2fbcf842 169 Pfam PF01202 Shikimate kinase 12 167 8.4E-30 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABED_0358 337752a426291735404113cf2fbcf842 169 Hamap MF_00109 Shikimate kinase [aroK]. 3 166 21.945 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABED_0358 337752a426291735404113cf2fbcf842 169 SUPERFAMILY SSF52540 2 167 4.56E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1179 8aa14437630977c26c1a870ff3dc23c5 191 Gene3D G3DSA:3.10.490.10 1 163 3.0E-5 T 14-10-2018 ABED_1885 e12e8ac66f6ed8029c5b4259514cd49e 74 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 4 49 2.3E-7 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component ABED_0567 1aff55fb6d3e6bc107ca5f3f13c4735f 478 SUPERFAMILY SSF101960 35 475 6.28E-136 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ABED_0567 1aff55fb6d3e6bc107ca5f3f13c4735f 478 Pfam PF01458 Uncharacterized protein family (UPF0051) 216 449 8.3E-67 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ABED_0567 1aff55fb6d3e6bc107ca5f3f13c4735f 478 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 14 469 9.6E-194 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 ABED_1243 f01b0c8c71ae7c0dc7a8a12d532f9be5 228 SUPERFAMILY SSF140931 41 206 7.72E-27 T 14-10-2018 IPR036597 Fido-like domain superfamily ABED_1243 f01b0c8c71ae7c0dc7a8a12d532f9be5 228 Gene3D G3DSA:1.10.3290.10 8 220 5.9E-49 T 14-10-2018 IPR036597 Fido-like domain superfamily ABED_1243 f01b0c8c71ae7c0dc7a8a12d532f9be5 228 Pfam PF02661 Fic/DOC family 49 153 9.9E-14 T 14-10-2018 IPR003812 Fido domain ABED_0851 69a5cf188fcdd83a28313bf71474dd02 332 Gene3D G3DSA:1.10.760.10 186 307 2.2E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0851 69a5cf188fcdd83a28313bf71474dd02 332 Gene3D G3DSA:1.10.760.10 42 180 3.3E-44 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0851 69a5cf188fcdd83a28313bf71474dd02 332 SUPERFAMILY SSF46626 191 287 6.45E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0851 69a5cf188fcdd83a28313bf71474dd02 332 SUPERFAMILY SSF46626 58 174 2.59E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABED_0851 69a5cf188fcdd83a28313bf71474dd02 332 Pfam PF00034 Cytochrome c 198 283 1.3E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABED_1074 43b0b75cb80132339d5050c88c10d087 172 Gene3D G3DSA:3.40.50.1820 9 172 2.3E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_1074 43b0b75cb80132339d5050c88c10d087 172 SUPERFAMILY SSF53474 22 171 2.37E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_1258 c870793d09661d77ffee79a22ed3227c 83 SUPERFAMILY SSF143120 11 60 6.67E-7 T 14-10-2018 IPR036165 YefM-like superfamily ABED_1258 c870793d09661d77ffee79a22ed3227c 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 77 5.1E-10 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ABED_0864 90f41c663e15b33f17e1ec6d7cb2a99c 121 SUPERFAMILY SSF55298 3 115 7.07E-24 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABED_0864 90f41c663e15b33f17e1ec6d7cb2a99c 121 Gene3D G3DSA:3.30.1330.40 1 119 1.3E-25 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABED_0864 90f41c663e15b33f17e1ec6d7cb2a99c 121 Pfam PF01042 Endoribonuclease L-PSP 33 114 6.6E-19 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ABED_1936 08c4508da04c1e52774553b2cd2fe866 181 SUPERFAMILY SSF52972 2 181 1.05E-37 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABED_1936 08c4508da04c1e52774553b2cd2fe866 181 Pfam PF02545 Maf-like protein 2 180 1.3E-24 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 ABED_1936 08c4508da04c1e52774553b2cd2fe866 181 Gene3D G3DSA:3.90.950.10 1 181 1.3E-34 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABED_1936 08c4508da04c1e52774553b2cd2fe866 181 PIRSF PIRSF006305 2 181 8.2E-35 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 ABED_1741 7d0b2e480a7e508d13a31156e553918f 102 SUPERFAMILY SSF46785 5 76 4.2E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_1741 7d0b2e480a7e508d13a31156e553918f 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1741 7d0b2e480a7e508d13a31156e553918f 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1741 7d0b2e480a7e508d13a31156e553918f 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1741 7d0b2e480a7e508d13a31156e553918f 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1741 7d0b2e480a7e508d13a31156e553918f 102 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 2.1E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_1741 7d0b2e480a7e508d13a31156e553918f 102 Gene3D G3DSA:1.10.10.10 4 88 6.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_1741 7d0b2e480a7e508d13a31156e553918f 102 SMART SM00418 7 83 1.7E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABED_0539 41ffe14f7991e1ea019661943b3790ec 284 Pfam PF16448 LapD/MoxY periplasmic domain 193 251 1.6E-6 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain ABED_0529 fc88c77e442d33537ca60068fa5f7b67 266 Gene3D G3DSA:1.10.3470.10 8 240 1.3E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like ABED_0529 fc88c77e442d33537ca60068fa5f7b67 266 Pfam PF00950 ABC 3 transport family 6 256 5.7E-70 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 ABED_0529 fc88c77e442d33537ca60068fa5f7b67 266 SUPERFAMILY SSF81345 3 256 2.62E-35 T 14-10-2018 IPR037294 ABC transporter, BtuC-like ABED_1080 6d44213435eda18f902590c84d227c2e 137 Gene3D G3DSA:3.10.180.10 7 137 4.3E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABED_1080 6d44213435eda18f902590c84d227c2e 137 SUPERFAMILY SSF54593 5 133 4.83E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABED_1080 6d44213435eda18f902590c84d227c2e 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 130 2.6E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABED_1543 50596ecb7bc31e5b666674cc17ca2699 372 Pfam PF00149 Calcineurin-like phosphoesterase 1 201 1.4E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABED_1543 50596ecb7bc31e5b666674cc17ca2699 372 SUPERFAMILY SSF56300 1 290 3.8E-43 T 14-10-2018 ABED_1543 50596ecb7bc31e5b666674cc17ca2699 372 Gene3D G3DSA:3.60.21.10 1 252 8.5E-51 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like ABED_1423 6a4eb1498ff653f9ee13fb297aeb099d 504 Gene3D G3DSA:1.10.486.10 326 416 4.1E-12 T 14-10-2018 ABED_1423 6a4eb1498ff653f9ee13fb297aeb099d 504 Gene3D G3DSA:3.40.50.300 417 495 4.1E-12 T 14-10-2018 ABED_1423 6a4eb1498ff653f9ee13fb297aeb099d 504 SUPERFAMILY SSF52540 1 498 9.23E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_1423 6a4eb1498ff653f9ee13fb297aeb099d 504 Pfam PF13245 AAA domain 7 247 2.5E-13 T 14-10-2018 ABED_1425 d013c411da9e0a2271dc13b38ff96aa6 687 SUPERFAMILY SSF48452 324 620 5.52E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0651 4e5a1844ac30d030e72879709d200e01 233 Pfam PF09335 SNARE associated Golgi protein 66 180 1.6E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein ABED_1941 4da05a5a01aaca8de5970d4ec68b8f16 115 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 48 101 1.0E-15 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA ABED_1941 4da05a5a01aaca8de5970d4ec68b8f16 115 Pfam PF11756 Nitrous oxide-stimulated promoter 5 103 4.8E-13 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA ABED_0811 03469363f19820273ac56933b4b8debe 99 Gene3D G3DSA:1.10.260.40 10 78 1.9E-7 T 14-10-2018 ABED_0811 03469363f19820273ac56933b4b8debe 99 SUPERFAMILY SSF47413 12 72 5.93E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABED_1640 7271cbc0c21c30e00812597963fd379c 486 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 47 370 3.1E-38 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT ABED_1640 7271cbc0c21c30e00812597963fd379c 486 PIRSF PIRSF016636 1 486 3.2E-156 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB ABED_1640 7271cbc0c21c30e00812597963fd379c 486 PIRSF PIRSF500217 1 486 4.6E-152 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 ABED_0280 4631dae69b51436c9e90765289b2e15d 674 SUPERFAMILY SSF52540 60 272 3.99E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0280 4631dae69b51436c9e90765289b2e15d 674 Pfam PF00350 Dynamin family 69 224 3.3E-26 T 14-10-2018 IPR022812 Dynamin superfamily ABED_0280 4631dae69b51436c9e90765289b2e15d 674 Gene3D G3DSA:3.40.50.300 69 303 6.6E-38 T 14-10-2018 ABED_0308 1ac76dbac68f4fa880bf58faf13c2b3c 201 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 43 193 1.1E-6 T 14-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain ABED_0169 83d528168a37913d942bbe697ddc451b 240 Pfam PF04172 LrgB-like family 21 233 1.3E-67 T 14-10-2018 IPR007300 CidB/LrgB family ABED_0901 4a3415707404953cbccb2be794640662 165 SUPERFAMILY SSF54001 18 135 6.67E-7 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABED_0633 51b9a08d851b61a0be6322882ba9719d 168 SUPERFAMILY SSF51161 8 159 2.63E-31 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily ABED_0633 51b9a08d851b61a0be6322882ba9719d 168 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 129 3.7E-10 T 14-10-2018 IPR001451 Hexapeptide repeat ABED_0633 51b9a08d851b61a0be6322882ba9719d 168 Gene3D G3DSA:2.160.10.10 2 166 3.3E-32 T 14-10-2018 ABED_0616 ba742b9f3ae692b3c708d9f92407c94a 123 Pfam PF02706 Chain length determinant protein 10 65 4.7E-7 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 ABED_1424 90177471a9f51136db659588571410ef 312 Gene3D G3DSA:3.20.20.80 21 235 1.1E-7 T 14-10-2018 ABED_1424 90177471a9f51136db659588571410ef 312 SUPERFAMILY SSF51445 13 213 1.15E-11 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily ABED_0960 748c12769c96a2fca68e490447a99b7a 309 PIRSF PIRSF028235 1 309 4.7E-148 T 14-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 ABED_0960 748c12769c96a2fca68e490447a99b7a 309 SUPERFAMILY SSF64182 3 307 2.35E-13 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily ABED_0043 45bc7b8ce21727346bb5c35f9103dd67 515 Pfam PF01384 Phosphate transporter family 48 502 1.7E-106 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ABED_1435 0e91609c07438917b0714a1ba321e339 177 Pfam PF09335 SNARE associated Golgi protein 25 139 5.0E-11 T 14-10-2018 IPR032816 SNARE associated Golgi protein ABED_0797 0767100dda2e4be809f65f5e1a282458 273 Pfam PF06067 Domain of unknown function (DUF932) 27 239 2.9E-30 T 14-10-2018 IPR026325 Protein of unknown function DUF932 ABED_1803 e61bf366fab7f77385856a4bbaee2be1 411 Pfam PF05940 NnrS protein 24 405 2.2E-71 T 14-10-2018 IPR010266 NnrS ABED_1010 aea8a216d51f8710f932a4473af0dce0 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 71 3.3E-6 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABED_1010 aea8a216d51f8710f932a4473af0dce0 101 Gene3D G3DSA:3.30.70.100 1 97 2.4E-16 T 14-10-2018 ABED_1010 aea8a216d51f8710f932a4473af0dce0 101 SUPERFAMILY SSF54909 3 85 1.03E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel ABED_2059 96da169d72e0982a0d5df0f331709198 222 Pfam PF13847 Methyltransferase domain 28 115 1.7E-7 T 14-10-2018 IPR025714 Methyltransferase domain ABED_2059 96da169d72e0982a0d5df0f331709198 222 Gene3D G3DSA:3.40.50.150 5 216 7.2E-19 T 14-10-2018 ABED_2059 96da169d72e0982a0d5df0f331709198 222 SUPERFAMILY SSF53335 24 187 6.78E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABED_1746 053130857340539bd0abf1afe008b608 394 SUPERFAMILY SSF103473 11 389 2.35E-36 T 14-10-2018 IPR036259 MFS transporter superfamily ABED_1746 053130857340539bd0abf1afe008b608 394 Gene3D G3DSA:1.20.1250.20 9 388 1.5E-34 T 14-10-2018 ABED_1746 053130857340539bd0abf1afe008b608 394 Pfam PF07690 Major Facilitator Superfamily 18 276 3.8E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABED_1613 5864e3d49aa8ab55617a4ff8929d3c6c 348 Pfam PF01594 AI-2E family transporter 6 335 4.3E-42 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like ABED_1674 532ee166c22e1da893a90a55ed5ae69c 261 PIRSF PIRSF035875 2 261 1.5E-38 T 14-10-2018 IPR017039 Virulence factor BrkB ABED_1674 532ee166c22e1da893a90a55ed5ae69c 261 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 255 2.5E-39 T 14-10-2018 IPR017039 Virulence factor BrkB ABED_1674 532ee166c22e1da893a90a55ed5ae69c 261 Pfam PF03631 Virulence factor BrkB 23 254 7.3E-33 T 14-10-2018 IPR017039 Virulence factor BrkB ABED_1967 7304d8a56d6e4890d3512d443ea08065 76 Pfam PF09834 Predicted membrane protein (DUF2061) 9 60 6.3E-24 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane ABED_2007 fd1ed9a610c658aed71070d55f1feb89 220 Gene3D G3DSA:3.40.109.10 4 213 7.7E-15 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABED_0837 a4c85c6b22a3218ef9b1614bf71caec9 187 Gene3D G3DSA:3.40.50.1820 1 187 7.8E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_0837 a4c85c6b22a3218ef9b1614bf71caec9 187 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 185 3.6E-41 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ABED_0837 a4c85c6b22a3218ef9b1614bf71caec9 187 SUPERFAMILY SSF53474 2 185 2.23E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold ABED_0265 2156a1c685b3a58ea66020f87868ea93 581 Pfam PF13687 Domain of unknown function (DUF4153) 156 374 8.8E-46 T 14-10-2018 IPR025291 Protein of unknown function DUF4153 ABED_1831 aabcb28b290aba7534d5f081b81fa143 202 Pfam PF09335 SNARE associated Golgi protein 34 160 3.0E-22 T 14-10-2018 IPR032816 SNARE associated Golgi protein ABED_0139 902a4e5abbf72fce95ce1c49a73846ee 102 Gene3D G3DSA:1.25.40.10 14 97 1.4E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABED_0139 902a4e5abbf72fce95ce1c49a73846ee 102 SMART SM00671 48 83 7.6E-11 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0139 902a4e5abbf72fce95ce1c49a73846ee 102 SMART SM00671 11 47 340.0 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0139 902a4e5abbf72fce95ce1c49a73846ee 102 SUPERFAMILY SSF81901 27 87 7.32E-16 T 14-10-2018 ABED_0139 902a4e5abbf72fce95ce1c49a73846ee 102 Pfam PF08238 Sel1 repeat 48 83 1.3E-8 T 14-10-2018 IPR006597 Sel1-like repeat ABED_0091 1423bc6ca294c7bb1e39e5a5f8bc6234 134 Pfam PF06146 Phosphate-starvation-inducible E 42 104 1.3E-6 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like ABED_1981 1dda73b5a5b03c807795b1174d9fbc25 248 Pfam PF01925 Sulfite exporter TauE/SafE 13 241 1.5E-25 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABED_1038 8c9996ec3bcaa2a5b489579ba9ac1b0c 125 Pfam PF04134 Protein of unknown function, DUF393 11 112 4.6E-6 T 14-10-2018 IPR007263 Protein of unknown function DUF393 ABED_1038 8c9996ec3bcaa2a5b489579ba9ac1b0c 125 Gene3D G3DSA:3.40.30.10 1 78 6.2E-5 T 14-10-2018 ABED_1038 8c9996ec3bcaa2a5b489579ba9ac1b0c 125 SUPERFAMILY SSF52833 4 50 2.46E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily ABED_1445 624051fa35bed726a4d4dde2f7705bc1 144 Pfam PF01152 Bacterial-like globin 28 138 2.3E-15 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 ABED_1445 624051fa35bed726a4d4dde2f7705bc1 144 SUPERFAMILY SSF46458 26 142 1.22E-17 T 14-10-2018 IPR009050 Globin-like superfamily ABED_1445 624051fa35bed726a4d4dde2f7705bc1 144 Gene3D G3DSA:1.10.490.10 18 144 1.5E-37 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ABED_1042 40a0f7d4b920d0e49d5096302ce53728 167 SUPERFAMILY SSF160387 64 138 8.63E-7 T 14-10-2018 ABED_0301 e55f0e83fd52c75efe798057845e50b6 155 Pfam PF12821 Threonine/Serine exporter, ThrE 11 145 2.2E-33 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE ABED_2089 479441c8dceae673c1f33e2e7f4eb953 1286 SUPERFAMILY SSF52540 21 129 1.91E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0288 e5394f9739858bb366a7c516a55f2c0d 103 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 17.78 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ABED_0288 e5394f9739858bb366a7c516a55f2c0d 103 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 94 7.1E-20 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ABED_0459 031e55808e58b6265c8c0a68973a6136 393 SUPERFAMILY SSF56935 35 393 4.88E-11 T 14-10-2018 ABED_0140 2e0733fd5c75f16099a695951a7e8195 606 Pfam PF02705 K+ potassium transporter 14 541 4.3E-157 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 ABED_0069 26923c43f16972bd8025acbe3145d068 534 Pfam PF11853 Protein of unknown function (DUF3373) 124 534 1.0E-145 T 14-10-2018 IPR021803 Protein of unknown function DUF3373 ABED_0764 74f8087a460edf102daac210da785efe 303 Pfam PF03547 Membrane transport protein 152 298 9.7E-16 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_0764 74f8087a460edf102daac210da785efe 303 Gene3D G3DSA:1.20.1530.20 201 303 1.8E-10 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily ABED_0536 9ed4fad9df500a2460029ebf4a1c0987 388 Pfam PF00999 Sodium/hydrogen exchanger family 8 364 1.7E-37 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABED_0536 9ed4fad9df500a2460029ebf4a1c0987 388 Gene3D G3DSA:1.20.1530.20 1 386 6.1E-42 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily ABED_0885 22d2312690e07c0f5cb4f2558babd442 200 Gene3D G3DSA:1.10.1760.20 1 193 7.6E-36 T 14-10-2018 ABED_0885 22d2312690e07c0f5cb4f2558babd442 200 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 194 1.5E-44 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 ABED_1342 5993b10fe253943a74965dcbb6c6614e 154 Gene3D G3DSA:1.10.357.10 1 151 9.3E-11 T 14-10-2018 ABED_0378 8f01c32c4e76e86c371b383ee02cbe40 174 Pfam PF04390 Lipopolysaccharide-assembly 43 168 2.3E-8 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 ABED_0775 15e52d3ec8f3d78ab6dc752cec2ea6fa 127 Pfam PF03692 Putative zinc- or iron-chelating domain 19 115 1.5E-12 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein ABED_1397 3adbb54babbc68f63116fe8bea2bafc5 74 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 26 8.2E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABED_0166 8c72a77727564f69cf107d97d3b877fe 146 Gene3D G3DSA:1.10.10.10 4 140 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABED_0166 8c72a77727564f69cf107d97d3b877fe 146 SUPERFAMILY SSF46785 7 138 6.06E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABED_0166 8c72a77727564f69cf107d97d3b877fe 146 SMART SM00347 27 126 0.0044 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABED_0527 da5ddc2b319d203c34e09db3499768fa 248 Pfam PF02698 DUF218 domain 80 238 3.0E-27 T 14-10-2018 IPR003848 Domain of unknown function DUF218 ABED_0690 b61a60e3f3ed477c77870b2da3c367a6 117 SUPERFAMILY SSF75708 8 90 1.7E-7 T 14-10-2018 ABED_1743 1f4c3adf4b7b27924909deea53cb6d0f 319 Pfam PF03773 Predicted permease 25 316 1.5E-62 T 14-10-2018 IPR005524 Predicted permease DUF318 ABED_0355 ae4d6aa789c1c9258c4b0578b2fb39ab 129 Gene3D G3DSA:3.30.420.270 57 122 9.4E-9 T 14-10-2018 ABED_0355 ae4d6aa789c1c9258c4b0578b2fb39ab 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 3 126 5.2E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ABED_1160 8633708dff4f002243b80b3ca98024d3 54 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 14 47 4.8E-8 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 ABED_0789 46ce9c31c00374d9ce94e222b9ee9fa4 127 Pfam PF04241 Protein of unknown function (DUF423) 24 110 4.1E-25 T 14-10-2018 IPR006696 Protein of unknown function DUF423 ABED_1672 4352506af6b5fb348d0c5d32fa831897 334 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 114 331 4.7E-72 T 14-10-2018 IPR029276 Plasminogen-binding protein PgbA, N-terminal ABED_1807 55c064edc7bcbf10dc439dc489a5da3e 402 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 46 213 4.0E-7 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like ABED_1056 a797240367645bd1ddf95a573bd4c198 152 Pfam PF05433 Glycine zipper 2TM domain 25 63 8.7E-8 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 ABED_1430 2bd82254541ce513e4f48827d1bbbd93 538 SUPERFAMILY SSF109604 2 417 9.43E-34 T 14-10-2018 ABED_1388 008f517e3938742de35228e713375b62 136 Pfam PF07681 DoxX 7 88 5.6E-6 T 14-10-2018 IPR032808 DoxX family ABED_0751 9019fcba9221339041c16cb0dc6bb8e0 240 Pfam PF01925 Sulfite exporter TauE/SafE 8 231 2.8E-20 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABED_0879 688ba68718d48656a2365bb8332ab420 395 Pfam PF01757 Acyltransferase family 46 378 2.4E-25 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ABED_2015 db5cfe59519df6d72f96036409df2edd 289 Gene3D G3DSA:3.40.50.300 34 212 2.3E-11 T 14-10-2018 ABED_2015 db5cfe59519df6d72f96036409df2edd 289 Pfam PF05621 Bacterial TniB protein 21 279 7.4E-73 T 14-10-2018 IPR008868 Bacterial TniB ABED_2015 db5cfe59519df6d72f96036409df2edd 289 SUPERFAMILY SSF52540 54 283 1.42E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABED_0908 a9ebe43d8167e4e0c07ba7227f9086eb 245 Pfam PF01925 Sulfite exporter TauE/SafE 6 235 8.0E-35 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABED_1276 07eeeb5e2aace5a0869860e30703d981 359 Pfam PF04332 Protein of unknown function (DUF475) 48 349 6.9E-88 T 14-10-2018 IPR007427 Protein of unknown function DUF475 ABED_0356 e1bd4e09e86bf54c71a4e62c2d803137 157 Pfam PF01618 MotA/TolQ/ExbB proton channel family 45 148 3.2E-25 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABED_0007 3fff687ca7ddf940a9af346a9c5c8320 135 Pfam PF09335 SNARE associated Golgi protein 33 132 2.5E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein ABED_0007 3fff687ca7ddf940a9af346a9c5c8320 135 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 3 125 9.0E-5 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 ABED_1768 cc9902da4534757e2d1ba306df38189d 226 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 77 2.0E-12 T 14-10-2018 IPR005648 Flagellar hook capping protein ABED_1116 122812f298a4cbaab4d86b5abfd44997 229 Gene3D G3DSA:3.30.1330.200 27 185 1.3E-38 T 14-10-2018 IPR038592 CheD-like superfamily ABED_1116 122812f298a4cbaab4d86b5abfd44997 229 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 25 179 21.727 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ABED_1116 122812f298a4cbaab4d86b5abfd44997 229 Pfam PF03975 CheD chemotactic sensory transduction 74 165 7.5E-24 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ABED_1116 122812f298a4cbaab4d86b5abfd44997 229 SUPERFAMILY SSF64438 29 167 3.66E-36 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic ABED_0084 ca7bf3a50fa7814bd27921e6857567cd 62 Pfam PF07866 Protein of unknown function (DUF1653) 7 56 5.1E-6 T 14-10-2018 IPR023387 DUF1653-like domain ABED_1661 6b783e6fa0e8036ccc4c9a5f57932503 264 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 234 4.1E-18 T 14-10-2018 ABED_0862 5a5de7bb90652a089f7b966b9be5f7cf 64 Pfam PF11127 Protein of unknown function (DUF2892) 14 57 3.8E-8 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 ABED_0867 850bff52ef8ee0887f04781be1d18696 567 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 48 529 7.2E-78 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 ABED_0684 2b7c1221edbb52d00cd988024792ba46 205 Pfam PF13114 RecO N terminal 1 71 5.0E-33 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal ABED_2095 57812964ce20047b70376ca545318890 1241 SUPERFAMILY SSF56349 783 927 5.89E-11 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABED_2095 57812964ce20047b70376ca545318890 1241 Pfam PF00589 Phage integrase family 828 924 1.1E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABED_0151 094b69a2ddae4f966776a4715b4b9a1b 252 Pfam PF01148 Cytidylyltransferase family 10 250 1.1E-48 T 14-10-2018 ABED_0151 094b69a2ddae4f966776a4715b4b9a1b 252 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 209 235 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 ABED_1775 83bd19e0e9d05f773f648b41ff2c0ff7 312 SUPERFAMILY SSF75708 137 307 5.36E-15 T 14-10-2018 ABED_0122 518e65c450bce020679aa643f701d524 183 Pfam PF04368 Protein of unknown function (DUF507) 1 182 4.5E-71 T 14-10-2018 IPR007463 Protein of unknown function DUF507 ABED_1910 68694b7a50313808948970a70c8f9bf4 392 Pfam PF02687 FtsX-like permease family 284 383 1.3E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABED_0046 94429d26ee34e96ffe51d2191f0c254b 145 SUPERFAMILY SSF143120 12 62 1.96E-5 T 14-10-2018 IPR036165 YefM-like superfamily ABED_1254 06c351a706bc23e13d8758e864b87caa 130 Gene3D G3DSA:1.10.260.40 1 51 1.4E-6 T 14-10-2018 ABED_0680 cbfc91848de010ab19728bb13163ee1e 65 Pfam PF04328 Selenoprotein, putative 5 65 6.3E-22 T 14-10-2018 IPR007423 Selenoprotein, putative ABED_1654 b34bddbf9d9c16d47414f103cfad6fbf 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 292 4.5E-51 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ABED_0014 8bdf056da22f00ab6a0a2e52335eb770 414 Pfam PF13194 Domain of unknown function (DUF4010) 183 389 7.0E-57 T 14-10-2018 IPR025105 Domain of unknown function DUF4010 ABED_0954 a802c3a67c887d736dae0e584ed9e931 102 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 23 69 1.8E-8 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter ABED_0800 8d086032b538e189ab5b92cb0b0460b2 100 Pfam PF11171 Protein of unknown function (DUF2958) 20 93 5.6E-16 T 14-10-2018 IPR021341 Protein of unknown function DUF2958 ABED_0612 e9e778738264620013942382e43f0402 234 Pfam PF02674 Colicin V production protein 7 151 2.6E-29 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 ABED_0477 859e0f4762e4669802593952b96c204c 103 Pfam PF04341 Protein of unknown function, DUF485 11 96 1.4E-29 T 14-10-2018 IPR007436 Protein of unknown function DUF485 ABED_0544 0fb56f5859a76c30a52f3760a424c01c 95 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 24 1.1E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABED_0807 fef08e9b518a7b34a8092406b6e153a6 491 Pfam PF03235 Protein of unknown function DUF262 23 179 9.7E-29 T 14-10-2018 IPR004919 Domain of unknown function DUF262 ABED_0044 a1ba453751ea13f500bce4815f55c507 244 Pfam PF03547 Membrane transport protein 89 236 4.1E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_0044 a1ba453751ea13f500bce4815f55c507 244 Pfam PF03547 Membrane transport protein 3 85 3.1E-8 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABED_0475 51ae4e0fea32f814d4bef20a211bd159 104 Pfam PF04341 Protein of unknown function, DUF485 11 97 1.9E-27 T 14-10-2018 IPR007436 Protein of unknown function DUF485 ABED_0452 faa9b7aebe9ccdb779d1f9190b239993 325 Pfam PF09603 Fibrobacter succinogenes major domain (Fib_succ_major) 124 324 1.5E-9 T 14-10-2018 IPR011871 Fibrobacter succinogenes major paralogous domain ABED_0685 23c7acb2ab9e9cd69635b878306c1eb8 84 Pfam PF14591 AF0941-like 4 78 4.1E-5 T 14-10-2018 IPR013502 Uncharacterised domain AF0941