locus-tag class description FM022_00010 PF00308 Bacterial dnaA protein FM022_00010 PF08299 Bacterial dnaA protein helix-turn-helix FM022_00010 PF11638 DnaA N-terminal domain FM022_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain FM022_00015 PF02767 DNA polymerase III beta subunit, central domain FM022_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain FM022_00020 PF00204 DNA gyrase B FM022_00020 PF00986 DNA gyrase B subunit, carboxyl terminus FM022_00020 PF01751 Toprim domain FM022_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase FM022_00030 PF14489 QueF-like protein FM022_00040 PF09335 SNARE associated Golgi protein FM022_00045 PF13649 Methyltransferase domain FM022_00050 PF08402 TOBE domain FM022_00050 PF00005 ABC transporter FM022_00055 PF00528 Binding-protein-dependent transport system inner membrane component FM022_00070 PF03459 TOBE domain FM022_00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FM022_00080 PF03466 LysR substrate binding domain FM022_00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FM022_00095 PF00849 RNA pseudouridylate synthase FM022_00100 PF10397 Adenylosuccinate lyase C-terminus FM022_00100 PF00206 Lyase FM022_00105 PF02867 Ribonucleotide reductase, barrel domain FM022_00105 PF00317 Ribonucleotide reductase, all-alpha domain FM022_00105 PF03477 ATP cone domain FM022_00130 PF18393 MotY N-terminal domain FM022_00130 PF00691 OmpA family FM022_00140 PF08240 Alcohol dehydrogenase GroES-like domain FM022_00140 PF00107 Zinc-binding dehydrogenase FM022_00145 PF01638 HxlR-like helix-turn-helix FM022_00150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FM022_00150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FM022_00155 PF02934 GatB/GatE catalytic domain FM022_00155 PF02637 GatB domain FM022_00170 PF02652 L-lactate permease FM022_00175 PF00486 Transcriptional regulatory protein, C terminal FM022_00175 PF00072 Response regulator receiver domain FM022_00180 PF00512 His Kinase A (phospho-acceptor) domain FM022_00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_00180 PF00989 PAS fold FM022_00185 PF02589 LUD domain FM022_00190 PF11870 Domain of unknown function (DUF3390) FM022_00190 PF02589 LUD domain FM022_00190 PF13183 4Fe-4S dicluster domain FM022_00195 PF02754 Cysteine-rich domain FM022_00200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FM022_00205 PF00364 Biotin-requiring enzyme FM022_00210 PF02785 Biotin carboxylase C-terminal domain FM022_00210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FM022_00210 PF00289 Biotin carboxylase, N-terminal domain FM022_00215 PF00271 Helicase conserved C-terminal domain FM022_00215 PF00270 DEAD/DEAH box helicase FM022_00220 PF01384 Phosphate transporter family FM022_00230 PF13537 Glutamine amidotransferase domain FM022_00230 PF00733 Asparagine synthase FM022_00250 PF01661 Macro domain FM022_00250 PF12002 MgsA AAA+ ATPase C terminal FM022_00250 PF05496 Holliday junction DNA helicase RuvB P-loop domain FM022_00250 PF16193 AAA C-terminal domain FM022_00260 PF01380 SIS domain FM022_00260 PF00571 CBS domain FM022_00265 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FM022_00265 PF00753 Metallo-beta-lactamase superfamily FM022_00265 PF17770 Ribonuclease J C-terminal domain FM022_00270 PF00398 Ribosomal RNA adenine dimethylase FM022_00275 PF00977 Histidine biosynthesis protein FM022_00290 PF04055 Radical SAM superfamily FM022_00295 PF00749 tRNA synthetases class I (E and Q), catalytic domain FM022_00300 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FM022_00330 PF00873 AcrB/AcrD/AcrF family FM022_00335 PF04264 YceI-like domain FM022_00360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FM022_00360 PF03129 Anticodon binding domain FM022_00360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FM022_00365 PF00707 Translation initiation factor IF-3, C-terminal domain FM022_00365 PF05198 Translation initiation factor IF-3, N-terminal domain FM022_00370 PF01632 Ribosomal protein L35 FM022_00375 PF00453 Ribosomal protein L20 FM022_00395 PF12804 MobA-like NTP transferase domain FM022_00400 PF00330 Aconitase family (aconitate hydratase) FM022_00405 PF01252 Signal peptidase (SPase) II FM022_00410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FM022_00410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FM022_00410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FM022_00410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FM022_00415 PF01649 Ribosomal protein S20 FM022_00420 PF00472 RF-1 domain FM022_00420 PF03462 PCRF domain FM022_00430 PF12849 PBP superfamily domain FM022_00435 PF00563 EAL domain FM022_00435 PF12792 CSS motif domain associated with EAL FM022_00440 PF00528 Binding-protein-dependent transport system inner membrane component FM022_00445 PF00528 Binding-protein-dependent transport system inner membrane component FM022_00450 PF00005 ABC transporter FM022_00465 PF00486 Transcriptional regulatory protein, C terminal FM022_00465 PF00072 Response regulator receiver domain FM022_00470 PF00989 PAS fold FM022_00470 PF00512 His Kinase A (phospho-acceptor) domain FM022_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_00470 PF16736 Single Cache-like FM022_00475 PF00572 Ribosomal protein L13 FM022_00480 PF00380 Ribosomal protein S9/S16 FM022_00485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FM022_00490 PF13419 Haloacid dehalogenase-like hydrolase FM022_00515 PF02405 Permease MlaE FM022_00520 PF02664 S-Ribosylhomocysteinase (LuxS) FM022_00535 PF07943 Penicillin-binding protein 5, C-terminal domain FM022_00535 PF00768 D-alanyl-D-alanine carboxypeptidase FM022_00550 PF02574 Homocysteine S-methyltransferase FM022_00550 PF00809 Pterin binding enzyme FM022_00550 PF02965 Vitamin B12 dependent methionine synthase, activation domain FM022_00550 PF02607 B12 binding domain FM022_00550 PF02310 B12 binding domain FM022_00555 PF01063 Amino-transferase class IV FM022_00570 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FM022_00570 PF01502 Phosphoribosyl-AMP cyclohydrolase FM022_00580 PF01883 Iron-sulfur cluster assembly protein FM022_00580 PF10609 NUBPL iron-transfer P-loop NTPase FM022_00585 PF01964 Radical SAM ThiC family FM022_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FM022_00595 PF02542 YgbB family FM022_00605 PF04608 Phosphatidylglycerophosphatase A FM022_00610 PF00117 Glutamine amidotransferase class-I FM022_00610 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FM022_00620 PF00709 Adenylosuccinate synthetase FM022_00625 PF13393 Histidyl-tRNA synthetase FM022_00630 PF00266 Aminotransferase class-V FM022_00635 PF04264 YceI-like domain FM022_00640 PF01047 MarR family FM022_00645 PF04264 YceI-like domain FM022_00660 PF17954 Quercetinase C-terminal cupin domain FM022_00660 PF02678 Pirin FM022_00665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FM022_00665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FM022_00670 PF00586 AIR synthase related protein, N-terminal domain FM022_00670 PF02769 AIR synthase related protein, C-terminal domain FM022_00675 PF17284 Spermidine synthase tetramerisation domain FM022_00680 PF01121 Dephospho-CoA kinase FM022_00685 PF01678 Diaminopimelate epimerase FM022_00690 PF02222 ATP-grasp domain FM022_00705 PF02705 K+ potassium transporter FM022_00730 PF01197 Ribosomal protein L31 FM022_00735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FM022_00740 PF08032 RNA 2'-O ribose methyltransferase substrate binding FM022_00740 PF00588 SpoU rRNA Methylase family FM022_00750 PF00155 Aminotransferase class I and II FM022_00755 PF01842 ACT domain FM022_00755 PF00742 Homoserine dehydrogenase FM022_00755 PF03447 Homoserine dehydrogenase, NAD binding domain FM022_00770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FM022_00770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FM022_00770 PF13288 DXP reductoisomerase C-terminal domain FM022_00785 PF00814 Glycoprotease family FM022_00790 PF01253 Translation initiation factor SUI1 FM022_00795 PF01256 Carbohydrate kinase FM022_00795 PF03853 YjeF-related protein N-terminus FM022_00800 PF03091 CutA1 divalent ion tolerance protein FM022_00805 PF05690 Thiazole biosynthesis protein ThiG FM022_00845 PF02436 Conserved carboxylase domain FM022_00845 PF00682 HMGL-like FM022_00855 PF12833 Helix-turn-helix domain FM022_00860 PF02203 Tar ligand binding domain homologue FM022_00860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_00860 PF00672 HAMP domain FM022_00865 PF04851 Type III restriction enzyme, res subunit FM022_00865 PF00271 Helicase conserved C-terminal domain FM022_00865 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FM022_00865 PF08463 EcoEI R protein C-terminal FM022_00880 PF02779 Transketolase, pyrimidine binding domain FM022_00880 PF02780 Transketolase, C-terminal domain FM022_00880 PF00456 Transketolase, thiamine diphosphate binding domain FM022_00885 PF03788 LrgA family FM022_00890 PF04172 LrgB-like family FM022_00900 PF03994 Domain of Unknown Function (DUF350) FM022_00905 PF00375 Sodium:dicarboxylate symporter family FM022_00935 PF13193 AMP-binding enzyme C-terminal domain FM022_00935 PF01553 Acyltransferase FM022_00935 PF00501 AMP-binding enzyme FM022_00940 PF01966 HD domain FM022_00940 PF08335 GlnD PII-uridylyltransferase FM022_00955 PF12796 Ankyrin repeats (3 copies) FM022_00960 PF00543 Nitrogen regulatory protein P-II FM022_00970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FM022_00970 PF02154 Flagellar motor switch protein FliM FM022_00975 PF02119 Flagellar P-ring protein FM022_00985 PF01313 Bacterial export proteins, family 3 FM022_01010 PF02107 Flagellar L-ring protein FM022_01015 PF00460 Flagella basal body rod protein FM022_01015 PF07559 Flagellar basal body protein FlaE FM022_01015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FM022_01020 PF07196 Flagellin hook IN motif FM022_01020 PF07195 Flagellar hook-associated protein 2 C-terminus FM022_01020 PF02465 Flagellar hook-associated protein 2 N-terminus FM022_01025 PF02561 Flagellar protein FliS FM022_01035 PF01171 PP-loop family FM022_01040 PF04055 Radical SAM superfamily FM022_01040 PF18693 TRAM domain FM022_01040 PF00919 Uncharacterized protein family UPF0004 FM022_01045 PF02569 Pantoate-beta-alanine ligase FM022_01050 PF00528 Binding-protein-dependent transport system inner membrane component FM022_01060 PF03616 Sodium/glutamate symporter FM022_01065 PF03652 Holliday junction resolvase FM022_01080 PF00923 Transaldolase/Fructose-6-phosphate aldolase FM022_01085 PF01474 Class-II DAHP synthetase family FM022_01090 PF03502 Nucleoside-specific channel-forming protein, Tsx FM022_01095 PF03960 ArsC family FM022_01100 PF02686 Glu-tRNAGln amidotransferase C subunit FM022_01105 PF01702 Queuine tRNA-ribosyltransferase FM022_01115 PF00155 Aminotransferase class I and II FM022_01125 PF01225 Mur ligase family, catalytic domain FM022_01125 PF08245 Mur ligase middle domain FM022_01125 PF02875 Mur ligase family, glutamate ligase domain FM022_01140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FM022_01140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FM022_01145 PF00773 RNB domain FM022_01150 PF02623 FliW protein FM022_01160 PF01250 Ribosomal protein S6 FM022_01165 PF00436 Single-strand binding protein family FM022_01170 PF01084 Ribosomal protein S18 FM022_01180 PF09190 DALR domain FM022_01180 PF01406 tRNA synthetases class I (C) catalytic domain FM022_01185 PF13184 NusA-like KH domain FM022_01185 PF08529 NusA N-terminal domain FM022_01195 PF00919 Uncharacterized protein family UPF0004 FM022_01195 PF04055 Radical SAM superfamily FM022_01195 PF01938 TRAM domain FM022_01200 PF04028 Domain of unknown function (DUF374) FM022_01210 PF04055 Radical SAM superfamily FM022_01220 PF00484 Carbonic anhydrase FM022_01225 PF00155 Aminotransferase class I and II FM022_01230 PF02021 Uncharacterised protein family UPF0102 FM022_01235 PF02597 ThiS family FM022_01235 PF05690 Thiazole biosynthesis protein ThiG FM022_01245 PF00224 Pyruvate kinase, barrel domain FM022_01245 PF00391 PEP-utilising enzyme, mobile domain FM022_01245 PF02887 Pyruvate kinase, alpha/beta domain FM022_01260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FM022_01260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FM022_01265 PF00425 chorismate binding enzyme FM022_01280 PF01063 Amino-transferase class IV FM022_01285 PF08274 PhnA Zinc-Ribbon FM022_01285 PF03831 PhnA domain FM022_01290 PF01863 Protein of unknown function DUF45 FM022_01295 PF01925 Sulfite exporter TauE/SafE FM022_01320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FM022_01320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FM022_01335 PF00285 Citrate synthase, C-terminal domain FM022_01340 PF00694 Aconitase C-terminal domain FM022_01340 PF00330 Aconitase family (aconitate hydratase) FM022_01345 PF04303 PrpF protein FM022_01355 PF00857 Isochorismatase family FM022_01365 PF03900 Porphobilinogen deaminase, C-terminal domain FM022_01365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FM022_01375 PF12169 DNA polymerase III subunits gamma and tau domain III FM022_01375 PF12170 DNA polymerase III tau subunit V interacting with alpha FM022_01380 PF01177 Asp/Glu/Hydantoin racemase FM022_01385 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FM022_01385 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FM022_01390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FM022_01390 PF07498 Rho termination factor, N-terminal domain FM022_01390 PF07497 Rho termination factor, RNA-binding domain FM022_01395 PF10417 C-terminal domain of 1-Cys peroxiredoxin FM022_01395 PF00578 AhpC/TSA family FM022_01400 PF00037 4Fe-4S binding domain FM022_01405 PF00334 Nucleoside diphosphate kinase FM022_01415 PF01783 Ribosomal L32p protein family FM022_01420 PF02504 Fatty acid synthesis protein FM022_01425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FM022_01425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FM022_01435 PF00350 Dynamin family FM022_01440 PF00350 Dynamin family FM022_01445 PF13183 4Fe-4S dicluster domain FM022_01445 PF13085 2Fe-2S iron-sulfur cluster binding domain FM022_01450 PF00890 FAD binding domain FM022_01450 PF02910 Fumarate reductase flavoprotein C-term FM022_01455 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FM022_01460 PF00361 Proton-conducting membrane transporter FM022_01465 PF00361 Proton-conducting membrane transporter FM022_01465 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FM022_01470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FM022_01470 PF00361 Proton-conducting membrane transporter FM022_01475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FM022_01480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FM022_01485 PF12838 4Fe-4S dicluster domain FM022_01490 PF00146 NADH dehydrogenase FM022_01495 PF00384 Molybdopterin oxidoreductase FM022_01495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FM022_01495 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FM022_01500 PF00285 Citrate synthase, C-terminal domain FM022_01505 PF10531 SLBB domain FM022_01505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FM022_01505 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FM022_01515 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FM022_01515 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FM022_01520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FM022_01525 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FM022_01535 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FM022_01540 PF12821 Threonine/Serine exporter, ThrE FM022_01540 PF06738 Putative threonine/serine exporter FM022_01545 PF06738 Putative threonine/serine exporter FM022_01555 PF03309 Type III pantothenate kinase FM022_01560 PF01634 ATP phosphoribosyltransferase FM022_01570 PF02203 Tar ligand binding domain homologue FM022_01570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_01570 PF00672 HAMP domain FM022_01580 PF00579 tRNA synthetases class I (W and Y) FM022_01585 PF00593 TonB dependent receptor FM022_01600 PF13649 Methyltransferase domain FM022_01610 PF00593 TonB dependent receptor FM022_01610 PF07715 TonB-dependent Receptor Plug Domain FM022_01620 PF02659 Putative manganese efflux pump FM022_01650 PF16916 Dimerisation domain of Zinc Transporter FM022_01650 PF01545 Cation efflux family FM022_01655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FM022_01655 PF02403 Seryl-tRNA synthetase N-terminal domain FM022_01660 PF05140 ResB-like family FM022_01660 PF01578 Cytochrome C assembly protein FM022_01665 PF02335 Cytochrome c552 FM022_01670 PF03264 NapC/NirT cytochrome c family, N-terminal region FM022_01680 PF00990 Diguanylate cyclase, GGDEF domain FM022_01680 PF10442 FIST C domain FM022_01680 PF00563 EAL domain FM022_01680 PF08495 FIST N domain FM022_01685 PF08447 PAS fold FM022_01685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_01705 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FM022_01710 PF12801 4Fe-4S binding domain FM022_01710 PF00037 4Fe-4S binding domain FM022_01715 PF12800 4Fe-4S binding domain FM022_01715 PF12838 4Fe-4S dicluster domain FM022_01720 PF01568 Molydopterin dinucleotide binding domain FM022_01720 PF10518 TAT (twin-arginine translocation) pathway signal sequence FM022_01720 PF00384 Molybdopterin oxidoreductase FM022_01720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FM022_01725 PF03480 Bacterial extracellular solute-binding protein, family 7 FM022_01730 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FM022_01735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FM022_01740 PF13426 PAS domain FM022_01740 PF00072 Response regulator receiver domain FM022_01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_01745 PF00072 Response regulator receiver domain FM022_01745 PF12833 Helix-turn-helix domain FM022_01750 PF03737 Aldolase/RraA FM022_01755 PF10414 Sirohaem synthase dimerisation region FM022_01755 PF14824 Sirohaem biosynthesis protein central FM022_01755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FM022_01765 PF13545 Crp-like helix-turn-helix domain FM022_01765 PF00027 Cyclic nucleotide-binding domain FM022_01775 PF04055 Radical SAM superfamily FM022_01775 PF06463 Molybdenum Cofactor Synthesis C FM022_01780 PF00312 Ribosomal protein S15 FM022_01795 PF13380 CoA binding domain FM022_01800 PF08521 Two-component sensor kinase N-terminal FM022_01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_01800 PF00512 His Kinase A (phospho-acceptor) domain FM022_01805 PF00486 Transcriptional regulatory protein, C terminal FM022_01805 PF00072 Response regulator receiver domain FM022_01810 PF00639 PPIC-type PPIASE domain FM022_01815 PF01116 Fructose-bisphosphate aldolase class-II FM022_01820 PF00171 Aldehyde dehydrogenase family FM022_01830 PF02472 Biopolymer transport protein ExbD/TolR FM022_01835 PF01618 MotA/TolQ/ExbB proton channel family FM022_01845 PF01202 Shikimate kinase FM022_01850 PF00815 Histidinol dehydrogenase FM022_01860 PF00348 Polyprenyl synthetase FM022_01865 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FM022_01865 PF01488 Shikimate / quinate 5-dehydrogenase FM022_01865 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FM022_01870 PF03129 Anticodon binding domain FM022_01870 PF04073 Aminoacyl-tRNA editing domain FM022_01870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FM022_01875 PF00924 Mechanosensitive ion channel FM022_01875 PF05552 Conserved TM helix FM022_01905 PF02699 Preprotein translocase subunit FM022_01910 PF02355 Protein export membrane protein FM022_01915 PF07549 SecD/SecF GG Motif FM022_01915 PF02355 Protein export membrane protein FM022_01930 PF13677 Membrane MotB of proton-channel complex MotA/MotB FM022_01930 PF00691 OmpA family FM022_01935 PF01618 MotA/TolQ/ExbB proton channel family FM022_01945 PF13603 Leucyl-tRNA synthetase, Domain 2 FM022_01945 PF00133 tRNA synthetases class I (I, L, M and V) FM022_01945 PF09334 tRNA synthetases class I (M) FM022_01955 PF08245 Mur ligase middle domain FM022_01985 PF00270 DEAD/DEAH box helicase FM022_01985 PF03461 TRCF domain FM022_01985 PF02559 CarD-like/TRCF domain FM022_01985 PF17757 UvrB interaction domain FM022_01985 PF00271 Helicase conserved C-terminal domain FM022_02005 PF00072 Response regulator receiver domain FM022_02005 PF00486 Transcriptional regulatory protein, C terminal FM022_02020 PF00672 HAMP domain FM022_02020 PF02743 Cache domain FM022_02020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_02040 PF13277 YmdB-like protein FM022_02055 PF01209 ubiE/COQ5 methyltransferase family FM022_02060 PF13742 OB-fold nucleic acid binding domain FM022_02060 PF02601 Exonuclease VII, large subunit FM022_02065 PF01584 CheW-like domain FM022_02070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FM022_02075 PF02261 Aspartate decarboxylase FM022_02080 PF02575 YbaB/EbfC DNA-binding family FM022_02085 PF00348 Polyprenyl synthetase FM022_02090 PF00166 Chaperonin 10 Kd subunit FM022_02095 PF00118 TCP-1/cpn60 chaperonin family FM022_02100 PF00512 His Kinase A (phospho-acceptor) domain FM022_02100 PF00672 HAMP domain FM022_02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_02105 PF00486 Transcriptional regulatory protein, C terminal FM022_02105 PF00072 Response regulator receiver domain FM022_02110 PF00149 Calcineurin-like phosphoesterase FM022_02135 PF00005 ABC transporter FM022_02150 PF00459 Inositol monophosphatase family FM022_02155 PF01380 SIS domain FM022_02160 PF02773 S-adenosylmethionine synthetase, C-terminal domain FM022_02160 PF02772 S-adenosylmethionine synthetase, central domain FM022_02160 PF00438 S-adenosylmethionine synthetase, N-terminal domain FM022_02165 PF01039 Carboxyl transferase domain FM022_02165 PF17848 Acetyl-coA carboxylase zinc finger domain FM022_02170 PF02581 Thiamine monophosphate synthase FM022_02175 PF02590 Predicted SPOUT methyltransferase FM022_02185 PF01207 Dihydrouridine synthase (Dus) FM022_02195 PF17862 AAA+ lid domain FM022_02195 PF00004 ATPase family associated with various cellular activities (AAA) FM022_02195 PF01434 Peptidase family M41 FM022_02210 PF11849 Domain of unknown function (DUF3369) FM022_02215 PF00486 Transcriptional regulatory protein, C terminal FM022_02215 PF00072 Response regulator receiver domain FM022_02220 PF08447 PAS fold FM022_02220 PF00989 PAS fold FM022_02220 PF00512 His Kinase A (phospho-acceptor) domain FM022_02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_02225 PF08502 LeuA allosteric (dimerisation) domain FM022_02225 PF00682 HMGL-like FM022_02230 PF00085 Thioredoxin FM022_02240 PF05192 MutS domain III FM022_02240 PF00488 MutS domain V FM022_02240 PF05188 MutS domain II FM022_02240 PF01624 MutS domain I FM022_02240 PF05190 MutS family domain IV FM022_02245 PF00873 AcrB/AcrD/AcrF family FM022_02250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FM022_02280 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit FM022_02290 PF00005 ABC transporter FM022_02290 PF00664 ABC transporter transmembrane region FM022_02300 PF01266 FAD dependent oxidoreductase FM022_02305 PF03707 Bacterial signalling protein N terminal repeat FM022_02305 PF00990 Diguanylate cyclase, GGDEF domain FM022_02305 PF00563 EAL domain FM022_02310 PF00977 Histidine biosynthesis protein FM022_02315 PF01370 NAD dependent epimerase/dehydratase family FM022_02315 PF08338 Domain of unknown function (DUF1731) FM022_02340 PF03144 Elongation factor Tu domain 2 FM022_02340 PF06421 GTP-binding protein LepA C-terminus FM022_02340 PF00009 Elongation factor Tu GTP binding domain FM022_02340 PF00679 Elongation factor G C-terminus FM022_02345 PF02583 Metal-sensitive transcriptional repressor FM022_02350 PF00403 Heavy-metal-associated domain FM022_02355 PF05736 OprF membrane domain FM022_02355 PF00691 OmpA family FM022_02360 PF14572 Phosphoribosyl synthetase-associated domain FM022_02360 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FM022_02380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FM022_02385 PF00557 Metallopeptidase family M24 FM022_02385 PF01321 Creatinase/Prolidase N-terminal domain FM022_02390 PF01220 Dehydroquinase class II FM022_02395 PF01979 Amidohydrolase family FM022_02400 PF01343 Peptidase family S49 FM022_02405 PF00871 Acetokinase family FM022_02410 PF01515 Phosphate acetyl/butaryl transferase FM022_02415 PF00871 Acetokinase family FM022_02430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FM022_02430 PF14480 DNA polymerase III polC-type N-terminus I FM022_02430 PF11490 DNA polymerase III polC-type N-terminus II FM022_02430 PF07733 Bacterial DNA polymerase III alpha NTPase domain FM022_02430 PF00929 Exonuclease FM022_02430 PF02811 PHP domain FM022_02430 PF14579 Helix-hairpin-helix motif FM022_02440 PF00474 Sodium:solute symporter family FM022_02450 PF00474 Sodium:solute symporter family FM022_02460 PF02811 PHP domain FM022_02460 PF07733 Bacterial DNA polymerase III alpha NTPase domain FM022_02460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FM022_02460 PF11490 DNA polymerase III polC-type N-terminus II FM022_02460 PF14579 Helix-hairpin-helix motif FM022_02460 PF00929 Exonuclease FM022_02470 PF00474 Sodium:solute symporter family FM022_02480 PF00486 Transcriptional regulatory protein, C terminal FM022_02480 PF00072 Response regulator receiver domain FM022_02485 PF00512 His Kinase A (phospho-acceptor) domain FM022_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_02485 PF00672 HAMP domain FM022_02485 PF13426 PAS domain FM022_02530 PF02464 Competence-damaged protein FM022_02530 PF18146 Damage-inducible protein CinA KH domain FM022_02530 PF00994 Probable molybdopterin binding domain FM022_02535 PF06039 Malate:quinone oxidoreductase (Mqo) FM022_02540 PF00133 tRNA synthetases class I (I, L, M and V) FM022_02540 PF08264 Anticodon-binding domain of tRNA FM022_02555 PF08245 Mur ligase middle domain FM022_02555 PF02875 Mur ligase family, glutamate ligase domain FM022_02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_02580 PF07730 Histidine kinase FM022_02595 PF00248 Aldo/keto reductase family FM022_02600 PF01384 Phosphate transporter family FM022_02605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_02605 PF00672 HAMP domain FM022_02605 PF02203 Tar ligand binding domain homologue FM022_02615 PF02203 Tar ligand binding domain homologue FM022_02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_02615 PF00672 HAMP domain FM022_02640 PF00589 Phage integrase family FM022_02645 PF03061 Thioesterase superfamily FM022_02655 PF01435 Peptidase family M48 FM022_02655 PF16491 CAAX prenyl protease N-terminal, five membrane helices FM022_02660 PF02646 RmuC family FM022_02670 PF03453 MoeA N-terminal region (domain I and II) FM022_02670 PF03454 MoeA C-terminal region (domain IV) FM022_02670 PF00994 Probable molybdopterin binding domain FM022_02680 PF01171 PP-loop family FM022_02700 PF00318 Ribosomal protein S2 FM022_02705 PF00889 Elongation factor TS FM022_02710 PF00005 ABC transporter FM022_02720 PF00625 Guanylate kinase FM022_02725 PF00990 Diguanylate cyclase, GGDEF domain FM022_02725 PF00563 EAL domain FM022_02725 PF08448 PAS fold FM022_02730 PF00403 Heavy-metal-associated domain FM022_02745 PF00005 ABC transporter FM022_02745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FM022_02750 PF00762 Ferrochelatase FM022_02765 PF02698 DUF218 domain FM022_02770 PF00005 ABC transporter FM022_02775 PF00950 ABC 3 transport family FM022_02780 PF13509 S1 domain FM022_02780 PF17783 CvfB-like winged helix domain FM022_02785 PF08534 Redoxin FM022_02805 PF00580 UvrD/REP helicase N-terminal domain FM022_02805 PF13361 UvrD-like helicase C-terminal domain FM022_02810 PF00999 Sodium/hydrogen exchanger family FM022_02810 PF02254 TrkA-N domain FM022_02810 PF02080 TrkA-C domain FM022_02815 PF08264 Anticodon-binding domain of tRNA FM022_02815 PF00133 tRNA synthetases class I (I, L, M and V) FM022_02815 PF10458 Valyl tRNA synthetase tRNA binding arm FM022_02820 PF09962 Uncharacterized conserved protein (DUF2196) FM022_02830 PF07690 Major Facilitator Superfamily FM022_02835 PF01725 Ham1 family FM022_02855 PF03807 NADP oxidoreductase coenzyme F420-dependent FM022_02855 PF14748 Pyrroline-5-carboxylate reductase dimerisation FM022_02860 PF13525 Outer membrane lipoprotein FM022_02865 PF02190 ATP-dependent protease La (LON) substrate-binding domain FM022_02865 PF00004 ATPase family associated with various cellular activities (AAA) FM022_02865 PF05362 Lon protease (S16) C-terminal proteolytic domain FM022_02880 PF01047 MarR family FM022_02890 PF13426 PAS domain FM022_02890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_02890 PF08447 PAS fold FM022_02940 PF00289 Biotin carboxylase, N-terminal domain FM022_02940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FM022_02940 PF02785 Biotin carboxylase C-terminal domain FM022_02945 PF01883 Iron-sulfur cluster assembly protein FM022_02950 PF02657 Fe-S metabolism associated domain FM022_02955 PF00266 Aminotransferase class-V FM022_02965 PF00005 ABC transporter FM022_02970 PF01458 Uncharacterized protein family (UPF0051) FM022_02975 PF00266 Aminotransferase class-V FM022_02980 PF01106 NifU-like domain FM022_02980 PF01592 NifU-like N terminal domain FM022_02980 PF04324 BFD-like [2Fe-2S] binding domain FM022_02985 PF00571 CBS domain FM022_02985 PF03448 MgtE intracellular N domain FM022_02985 PF01769 Divalent cation transporter FM022_02990 PF07694 5TMR of 5TMR-LYT FM022_02990 PF00990 Diguanylate cyclase, GGDEF domain FM022_02995 PF00206 Lyase FM022_02995 PF14698 Argininosuccinate lyase C-terminal FM022_03005 PF00899 ThiF family FM022_03010 PF01272 Transcription elongation factor, GreA/GreB, C-term FM022_03010 PF03449 Transcription elongation factor, N-terminal FM022_03020 PF17757 UvrB interaction domain FM022_03020 PF12344 Ultra-violet resistance protein B FM022_03020 PF02151 UvrB/uvrC motif FM022_03020 PF04851 Type III restriction enzyme, res subunit FM022_03020 PF00271 Helicase conserved C-terminal domain FM022_03025 PF00672 HAMP domain FM022_03025 PF02203 Tar ligand binding domain homologue FM022_03025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_03030 PF00730 HhH-GPD superfamily base excision DNA repair protein FM022_03030 PF00633 Helix-hairpin-helix motif FM022_03030 PF10576 Iron-sulfur binding domain of endonuclease III FM022_03050 PF00672 HAMP domain FM022_03050 PF02203 Tar ligand binding domain homologue FM022_03050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_03065 PF01627 Hpt domain FM022_03065 PF00486 Transcriptional regulatory protein, C terminal FM022_03065 PF00072 Response regulator receiver domain FM022_03100 PF02502 Ribose/Galactose Isomerase FM022_03105 PF10502 Signal peptidase, peptidase S26 FM022_03110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FM022_03110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FM022_03115 PF01386 Ribosomal L25p family FM022_03115 PF14693 Ribosomal protein TL5, C-terminal domain FM022_03120 PF01195 Peptidyl-tRNA hydrolase FM022_03145 PF00579 tRNA synthetases class I (W and Y) FM022_03145 PF01479 S4 domain FM022_03150 PF02824 TGS domain FM022_03150 PF04607 Region found in RelA / SpoT proteins FM022_03150 PF13291 ACT domain FM022_03155 PF01192 RNA polymerase Rpb6 FM022_03160 PF00696 Amino acid kinase family FM022_03170 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FM022_03175 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FM022_03180 PF00425 chorismate binding enzyme FM022_03180 PF04715 Anthranilate synthase component I, N terminal region FM022_03190 PF00464 Serine hydroxymethyltransferase FM022_03195 PF00152 tRNA synthetases class II (D, K and N) FM022_03195 PF01336 OB-fold nucleic acid binding domain FM022_03205 PF04551 GcpE protein FM022_03215 PF00772 DnaB-like helicase N terminal domain FM022_03215 PF03796 DnaB-like helicase C terminal domain FM022_03225 PF02719 Polysaccharide biosynthesis protein FM022_03230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FM022_03240 PF08666 SAF domain FM022_03240 PF03102 NeuB family FM022_03245 PF02350 UDP-N-acetylglucosamine 2-epimerase FM022_03250 PF00483 Nucleotidyl transferase FM022_03255 PF02348 Cytidylyltransferase FM022_03260 PF00202 Aminotransferase class-III FM022_03270 PF00117 Glutamine amidotransferase class-I FM022_03275 PF00977 Histidine biosynthesis protein FM022_03285 PF00795 Carbon-nitrogen hydrolase FM022_03305 PF00132 Bacterial transferase hexapeptide (six repeats) FM022_03310 PF01370 NAD dependent epimerase/dehydratase family FM022_03325 PF01370 NAD dependent epimerase/dehydratase family FM022_03340 PF02719 Polysaccharide biosynthesis protein FM022_03340 PF08485 Polysaccharide biosynthesis protein C-terminal FM022_03345 PF02350 UDP-N-acetylglucosamine 2-epimerase FM022_03350 PF04321 RmlD substrate binding domain FM022_03360 PF01370 NAD dependent epimerase/dehydratase family FM022_03365 PF00953 Glycosyl transferase family 4 FM022_03370 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FM022_03385 PF14743 DNA ligase OB-like domain FM022_03385 PF01068 ATP dependent DNA ligase domain FM022_03390 PF00156 Phosphoribosyl transferase domain FM022_03395 PF00291 Pyridoxal-phosphate dependent enzyme FM022_03415 PF02472 Biopolymer transport protein ExbD/TolR FM022_03420 PF01618 MotA/TolQ/ExbB proton channel family FM022_03435 PF02687 FtsX-like permease family FM022_03435 PF12704 MacB-like periplasmic core domain FM022_03435 PF00005 ABC transporter FM022_03440 PF00005 ABC transporter FM022_03440 PF12704 MacB-like periplasmic core domain FM022_03440 PF02687 FtsX-like permease family FM022_03485 PF01475 Ferric uptake regulator family FM022_03495 PF10415 Fumarase C C-terminus FM022_03495 PF00206 Lyase FM022_03505 PF13426 PAS domain FM022_03505 PF07568 Histidine kinase FM022_03505 PF13581 Histidine kinase-like ATPase domain FM022_03510 PF00072 Response regulator receiver domain FM022_03515 PF00593 TonB dependent receptor FM022_03515 PF07715 TonB-dependent Receptor Plug Domain FM022_03520 PF13640 2OG-Fe(II) oxygenase superfamily FM022_03520 PF18331 PKHD-type hydroxylase C-terminal domain FM022_03530 PF07715 TonB-dependent Receptor Plug Domain FM022_03530 PF00593 TonB dependent receptor FM022_03550 PF13722 5TM C-terminal transporter carbon starvation CstA FM022_03550 PF02554 Carbon starvation protein CstA FM022_03555 PF06071 Protein of unknown function (DUF933) FM022_03555 PF01926 50S ribosome-binding GTPase FM022_03575 PF06865 Pyrimidine/purine nucleoside phosphorylase FM022_03585 PF02769 AIR synthase related protein, C-terminal domain FM022_03585 PF00586 AIR synthase related protein, N-terminal domain FM022_03590 PF01142 tRNA pseudouridine synthase D (TruD) FM022_03605 PF01330 RuvA N terminal domain FM022_03605 PF07499 RuvA, C-terminal domain FM022_03610 PF07478 D-ala D-ala ligase C-terminus FM022_03610 PF01820 D-ala D-ala ligase N-terminus FM022_03620 PF08245 Mur ligase middle domain FM022_03620 PF02875 Mur ligase family, glutamate ligase domain FM022_03625 PF01230 HIT domain FM022_03635 PF00338 Ribosomal protein S10p/S20e FM022_03640 PF00297 Ribosomal protein L3 FM022_03645 PF00573 Ribosomal protein L4/L1 family FM022_03650 PF00276 Ribosomal protein L23 FM022_03655 PF03947 Ribosomal Proteins L2, C-terminal domain FM022_03655 PF00181 Ribosomal Proteins L2, RNA binding domain FM022_03660 PF00203 Ribosomal protein S19 FM022_03665 PF00237 Ribosomal protein L22p/L17e FM022_03670 PF00189 Ribosomal protein S3, C-terminal domain FM022_03670 PF07650 KH domain FM022_03675 PF00252 Ribosomal protein L16p/L10e FM022_03680 PF00831 Ribosomal L29 protein FM022_03685 PF00366 Ribosomal protein S17 FM022_03690 PF00238 Ribosomal protein L14p/L23e FM022_03695 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FM022_03695 PF00467 KOW motif FM022_03700 PF00281 Ribosomal protein L5 FM022_03700 PF00673 ribosomal L5P family C-terminus FM022_03705 PF00253 Ribosomal protein S14p/S29e FM022_03710 PF00410 Ribosomal protein S8 FM022_03715 PF00347 Ribosomal protein L6 FM022_03720 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FM022_03725 PF00333 Ribosomal protein S5, N-terminal domain FM022_03725 PF03719 Ribosomal protein S5, C-terminal domain FM022_03730 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FM022_03735 PF00344 SecY translocase FM022_03740 PF00557 Metallopeptidase family M24 FM022_03745 PF01176 Translation initiation factor 1A / IF-1 FM022_03750 PF03167 Uracil DNA glycosylase superfamily FM022_03760 PF00152 tRNA synthetases class II (D, K and N) FM022_03760 PF01336 OB-fold nucleic acid binding domain FM022_03760 PF02938 GAD domain FM022_03775 PF05191 Adenylate kinase, active site lid FM022_03790 PF00302 Chloramphenicol acetyltransferase FM022_03805 PF00465 Iron-containing alcohol dehydrogenase FM022_03810 PF02203 Tar ligand binding domain homologue FM022_03810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_03810 PF00672 HAMP domain FM022_03815 PF01168 Alanine racemase, N-terminal domain FM022_03815 PF00842 Alanine racemase, C-terminal domain FM022_03820 PF01541 GIY-YIG catalytic domain FM022_03820 PF02151 UvrB/uvrC motif FM022_03820 PF08459 UvrC Helix-hairpin-helix N-terminal FM022_03825 PF00672 HAMP domain FM022_03825 PF02203 Tar ligand binding domain homologue FM022_03825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_03830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_03830 PF00672 HAMP domain FM022_03830 PF02203 Tar ligand binding domain homologue FM022_03835 PF02203 Tar ligand binding domain homologue FM022_03835 PF00672 HAMP domain FM022_03835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_03840 PF02203 Tar ligand binding domain homologue FM022_03840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_03840 PF00672 HAMP domain FM022_03855 PF08360 QacR-like protein, C-terminal region FM022_03855 PF00440 Bacterial regulatory proteins, tetR family FM022_03860 PF00873 AcrB/AcrD/AcrF family FM022_03890 PF08448 PAS fold FM022_03890 PF00990 Diguanylate cyclase, GGDEF domain FM022_03895 PF03372 Endonuclease/Exonuclease/phosphatase family FM022_03915 PF08212 Lipocalin-like domain FM022_03930 PF03109 ABC1 family FM022_03940 PF00563 EAL domain FM022_03940 PF12792 CSS motif domain associated with EAL FM022_03945 PF00072 Response regulator receiver domain FM022_03945 PF04397 LytTr DNA-binding domain FM022_03950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_03950 PF06580 Histidine kinase FM022_03950 PF13492 GAF domain FM022_03950 PF07694 5TMR of 5TMR-LYT FM022_03955 PF01593 Flavin containing amine oxidoreductase FM022_03980 PF00342 Phosphoglucose isomerase FM022_03985 PF00483 Nucleotidyl transferase FM022_03990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FM022_03990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FM022_03990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FM022_03990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FM022_04020 PF02203 Tar ligand binding domain homologue FM022_04020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_04020 PF00672 HAMP domain FM022_04025 PF08447 PAS fold FM022_04025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_04030 PF01361 Tautomerase enzyme FM022_04035 PF03466 LysR substrate binding domain FM022_04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FM022_04040 PF00218 Indole-3-glycerol phosphate synthase FM022_04050 PF03692 Putative zinc- or iron-chelating domain FM022_04065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FM022_04065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FM022_04065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FM022_04070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FM022_04080 PF07733 Bacterial DNA polymerase III alpha NTPase domain FM022_04080 PF11490 DNA polymerase III polC-type N-terminus II FM022_04080 PF14480 DNA polymerase III polC-type N-terminus I FM022_04080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FM022_04080 PF14579 Helix-hairpin-helix motif FM022_04080 PF02811 PHP domain FM022_04080 PF00929 Exonuclease FM022_04085 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FM022_04090 PF00834 Ribulose-phosphate 3 epimerase family FM022_04095 PF02253 Phospholipase A1 FM022_04105 PF00293 NUDIX domain FM022_04110 PF04461 Protein of unknown function (DUF520) FM022_04120 PF04241 Protein of unknown function (DUF423) FM022_04125 PF00156 Phosphoribosyl transferase domain FM022_04140 PF01168 Alanine racemase, N-terminal domain FM022_04145 PF02163 Peptidase family M50 FM022_04145 PF17820 PDZ domain FM022_04160 PF00701 Dihydrodipicolinate synthetase family FM022_04170 PF01180 Dihydroorotate dehydrogenase FM022_04175 PF00005 ABC transporter FM022_04175 PF00664 ABC transporter transmembrane region FM022_04180 PF03023 Lipid II flippase MurJ FM022_04195 PF02130 Uncharacterized protein family UPF0054 FM022_04205 PF03575 Peptidase family S51 FM022_04210 PF18073 Rubredoxin metal binding domain FM022_04215 PF05728 Uncharacterised protein family (UPF0227) FM022_04220 PF03150 Di-haem cytochrome c peroxidase FM022_04220 PF00034 Cytochrome c FM022_04220 PF14376 Haem-binding domain FM022_04235 PF00448 SRP54-type protein, GTPase domain FM022_04240 PF00578 AhpC/TSA family FM022_04245 PF01812 5-formyltetrahydrofolate cyclo-ligase family FM022_04250 PF00013 KH domain FM022_04250 PF12072 Domain of unknown function (DUF3552) FM022_04250 PF01966 HD domain FM022_04260 PF00528 Binding-protein-dependent transport system inner membrane component FM022_04260 PF12911 N-terminal TM domain of oligopeptide transport permease C FM022_04265 PF00106 short chain dehydrogenase FM022_04285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FM022_04295 PF00072 Response regulator receiver domain FM022_04295 PF00486 Transcriptional regulatory protein, C terminal FM022_04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_04300 PF00512 His Kinase A (phospho-acceptor) domain FM022_04305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FM022_04305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FM022_04310 PF00990 Diguanylate cyclase, GGDEF domain FM022_04310 PF17151 Periplasmic sensor domain FM022_04315 PF09424 Yqey-like protein FM022_04330 PF07992 Pyridine nucleotide-disulphide oxidoreductase FM022_04335 PF00561 alpha/beta hydrolase fold FM022_04350 PF01042 Endoribonuclease L-PSP FM022_04365 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FM022_04370 PF02540 NAD synthase FM022_04370 PF00958 GMP synthase C terminal domain FM022_04370 PF00117 Glutamine amidotransferase class-I FM022_04375 PF00890 FAD binding domain FM022_04385 PF01863 Protein of unknown function DUF45 FM022_04390 PF00155 Aminotransferase class I and II FM022_04395 PF01545 Cation efflux family FM022_04395 PF16916 Dimerisation domain of Zinc Transporter FM022_04400 PF01966 HD domain FM022_04400 PF00072 Response regulator receiver domain FM022_04440 PF07690 Major Facilitator Superfamily FM022_04450 PF13190 PDGLE domain FM022_04450 PF01891 Cobalt uptake substrate-specific transmembrane region FM022_04465 PF00005 ABC transporter FM022_04470 PF17287 POTRA domain FM022_04470 PF08479 POTRA domain, ShlB-type FM022_04470 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FM022_04475 PF04829 Pre-toxin domain with VENN motif FM022_04475 PF15526 Novel toxin 21 FM022_04475 PF05860 haemagglutination activity domain FM022_04475 PF13332 Hemagglutinin repeat FM022_04475 PF05860 haemagglutination activity domain FM022_04475 PF15526 Novel toxin 21 FM022_04475 PF05594 Haemagluttinin repeat FM022_04475 PF05594 Haemagluttinin repeat FM022_04475 PF04829 Pre-toxin domain with VENN motif FM022_04475 PF13332 Hemagglutinin repeat FM022_04515 PF04221 RelB antitoxin FM022_04530 PF01594 AI-2E family transporter FM022_04555 PF17755 UvrA DNA-binding domain FM022_04555 PF17760 UvrA interaction domain FM022_04565 PF08447 PAS fold FM022_04565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_04570 PF01925 Sulfite exporter TauE/SafE FM022_04575 PF00132 Bacterial transferase hexapeptide (six repeats) FM022_04575 PF06426 Serine acetyltransferase, N-terminal FM022_04580 PF17944 Arginine decarboxylase C-terminal helical extension FM022_04580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FM022_04580 PF17810 Arginine decarboxylase helical bundle domain FM022_04585 PF13393 Histidyl-tRNA synthetase FM022_04585 PF03129 Anticodon binding domain FM022_04590 PF02223 Thymidylate kinase FM022_04595 PF01467 Cytidylyltransferase-like FM022_04600 PF02441 Flavoprotein FM022_04610 PF01281 Ribosomal protein L9, N-terminal domain FM022_04610 PF03948 Ribosomal protein L9, C-terminal domain FM022_04615 PF00227 Proteasome subunit FM022_04640 PF03330 Lytic transglycolase FM022_04640 PF05036 Sporulation related domain FM022_04645 PF00475 Imidazoleglycerol-phosphate dehydratase FM022_04665 PF01926 50S ribosome-binding GTPase FM022_04690 PF01118 Semialdehyde dehydrogenase, NAD binding domain FM022_04710 PF00873 AcrB/AcrD/AcrF family FM022_04715 PF00873 AcrB/AcrD/AcrF family FM022_04730 PF11849 Domain of unknown function (DUF3369) FM022_04735 PF00813 FliP family FM022_04740 PF03717 Penicillin-binding Protein dimerisation domain FM022_04740 PF00905 Penicillin binding protein transpeptidase domain FM022_04760 PF00005 ABC transporter FM022_04765 PF02390 Putative methyltransferase FM022_04775 PF00849 RNA pseudouridylate synthase FM022_04775 PF01479 S4 domain FM022_04790 PF00202 Aminotransferase class-III FM022_04815 PF04545 Sigma-70, region 4 FM022_04815 PF04539 Sigma-70 region 3 FM022_04815 PF04542 Sigma-70 region 2 FM022_04815 PF00140 Sigma-70 factor, region 1.2 FM022_04820 PF00694 Aconitase C-terminal domain FM022_04825 PF00180 Isocitrate/isopropylmalate dehydrogenase FM022_04840 PF00444 Ribosomal protein L36 FM022_04845 PF00416 Ribosomal protein S13/S18 FM022_04850 PF00411 Ribosomal protein S11 FM022_04855 PF01479 S4 domain FM022_04855 PF00163 Ribosomal protein S4/S9 N-terminal domain FM022_04860 PF01000 RNA polymerase Rpb3/RpoA insert domain FM022_04860 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FM022_04860 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FM022_04865 PF01196 Ribosomal protein L17 FM022_04870 PF01425 Amidase FM022_04875 PF00571 CBS domain FM022_04875 PF00478 IMP dehydrogenase / GMP reductase domain FM022_04895 PF00486 Transcriptional regulatory protein, C terminal FM022_04895 PF00072 Response regulator receiver domain FM022_04925 PF00226 DnaJ domain FM022_04925 PF01556 DnaJ C terminal domain FM022_04925 PF00684 DnaJ central domain FM022_04935 PF00933 Glycosyl hydrolase family 3 N terminal domain FM022_04940 PF13426 PAS domain FM022_04940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_04940 PF00512 His Kinase A (phospho-acceptor) domain FM022_04940 PF00672 HAMP domain FM022_04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_04945 PF00072 Response regulator receiver domain FM022_04945 PF09456 RcsC Alpha-Beta-Loop (ABL) FM022_04945 PF00512 His Kinase A (phospho-acceptor) domain FM022_04965 PF00005 ABC transporter FM022_04980 PF00107 Zinc-binding dehydrogenase FM022_04980 PF08240 Alcohol dehydrogenase GroES-like domain FM022_05000 PF01638 HxlR-like helix-turn-helix FM022_05005 PF02525 Flavodoxin-like fold FM022_05015 PF00893 Small Multidrug Resistance protein FM022_05030 PF01161 Phosphatidylethanolamine-binding protein FM022_05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FM022_05035 PF03466 LysR substrate binding domain FM022_05070 PF01638 HxlR-like helix-turn-helix FM022_05075 PF02525 Flavodoxin-like fold FM022_05080 PF02525 Flavodoxin-like fold FM022_05085 PF00881 Nitroreductase family FM022_05095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FM022_05105 PF00881 Nitroreductase family FM022_05115 PF12848 ABC transporter FM022_05115 PF00005 ABC transporter FM022_05120 PF03061 Thioesterase superfamily FM022_05130 PF12826 Helix-hairpin-helix motif FM022_05130 PF03120 NAD-dependent DNA ligase OB-fold domain FM022_05130 PF01653 NAD-dependent DNA ligase adenylation domain FM022_05130 PF00533 BRCA1 C Terminus (BRCT) domain FM022_05135 PF03738 Glutathionylspermidine synthase preATP-grasp FM022_05145 PF01966 HD domain FM022_05145 PF13286 Phosphohydrolase-associated domain FM022_05150 PF08501 Shikimate dehydrogenase substrate binding domain FM022_05165 PF03949 Malic enzyme, NAD binding domain FM022_05165 PF01515 Phosphate acetyl/butaryl transferase FM022_05165 PF00390 Malic enzyme, N-terminal domain FM022_05170 PF01842 ACT domain FM022_05170 PF00551 Formyl transferase FM022_05175 PF00588 SpoU rRNA Methylase family FM022_05200 PF00486 Transcriptional regulatory protein, C terminal FM022_05200 PF00072 Response regulator receiver domain FM022_05210 PF16200 C-terminal region of band_7 FM022_05210 PF01145 SPFH domain / Band 7 family FM022_05235 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FM022_05240 PF00849 RNA pseudouridylate synthase FM022_05240 PF01479 S4 domain FM022_05265 PF07715 TonB-dependent Receptor Plug Domain FM022_05265 PF00593 TonB dependent receptor FM022_05270 PF00005 ABC transporter FM022_05275 PF01032 FecCD transport family FM022_05280 PF00999 Sodium/hydrogen exchanger family FM022_05285 PF00300 Histidine phosphatase superfamily (branch 1) FM022_05290 PF00664 ABC transporter transmembrane region FM022_05290 PF00005 ABC transporter FM022_05300 PF00072 Response regulator receiver domain FM022_05300 PF00486 Transcriptional regulatory protein, C terminal FM022_05305 PF00672 HAMP domain FM022_05305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_05305 PF00512 His Kinase A (phospho-acceptor) domain FM022_05305 PF13426 PAS domain FM022_05330 PF00072 Response regulator receiver domain FM022_05330 PF00990 Diguanylate cyclase, GGDEF domain FM022_05340 PF00271 Helicase conserved C-terminal domain FM022_05340 PF00270 DEAD/DEAH box helicase FM022_05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_05345 PF00512 His Kinase A (phospho-acceptor) domain FM022_05345 PF00989 PAS fold FM022_05345 PF08447 PAS fold FM022_05350 PF00486 Transcriptional regulatory protein, C terminal FM022_05350 PF00072 Response regulator receiver domain FM022_05355 PF05736 OprF membrane domain FM022_05355 PF00691 OmpA family FM022_05360 PF03412 Peptidase C39 family FM022_05360 PF00664 ABC transporter transmembrane region FM022_05360 PF00005 ABC transporter FM022_05370 PF00196 Bacterial regulatory proteins, luxR family FM022_05370 PF00072 Response regulator receiver domain FM022_05385 PF01761 3-dehydroquinate synthase FM022_05395 PF04055 Radical SAM superfamily FM022_05395 PF00919 Uncharacterized protein family UPF0004 FM022_05410 PF00994 Probable molybdopterin binding domain FM022_05415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FM022_05465 PF18364 Molybdopterin oxidoreductase N-terminal domain FM022_05465 PF00384 Molybdopterin oxidoreductase FM022_05465 PF01568 Molydopterin dinucleotide binding domain FM022_05470 PF00561 alpha/beta hydrolase fold FM022_05475 PF16925 Tetracyclin repressor-like, C-terminal domain FM022_05475 PF00440 Bacterial regulatory proteins, tetR family FM022_05480 PF01713 Smr domain FM022_05480 PF00488 MutS domain V FM022_05485 PF01595 Cyclin M transmembrane N-terminal domain FM022_05485 PF03471 Transporter associated domain FM022_05485 PF00571 CBS domain FM022_05495 PF01546 Peptidase family M20/M25/M40 FM022_05495 PF07687 Peptidase dimerisation domain FM022_05500 PF00909 Ammonium Transporter Family FM022_05505 PF00543 Nitrogen regulatory protein P-II FM022_05515 PF02541 Ppx/GppA phosphatase family FM022_05525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FM022_05525 PF00205 Thiamine pyrophosphate enzyme, central domain FM022_05525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FM022_05530 PF10369 Small subunit of acetolactate synthase FM022_05535 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FM022_05535 PF00132 Bacterial transferase hexapeptide (six repeats) FM022_05540 PF17854 FtsK alpha domain FM022_05540 PF01580 FtsK/SpoIIIE family FM022_05540 PF09397 Ftsk gamma domain FM022_05555 PF02810 SEC-C motif FM022_05560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FM022_05565 PF01926 50S ribosome-binding GTPase FM022_05565 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FM022_05570 PF01740 STAS domain FM022_05570 PF00916 Sulfate permease family FM022_05580 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FM022_05580 PF02844 Phosphoribosylglycinamide synthetase, N domain FM022_05580 PF02843 Phosphoribosylglycinamide synthetase, C domain FM022_05600 PF03725 3' exoribonuclease family, domain 2 FM022_05600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FM022_05600 PF01138 3' exoribonuclease family, domain 1 FM022_05600 PF00013 KH domain FM022_05600 PF00575 S1 RNA binding domain FM022_05605 PF00072 Response regulator receiver domain FM022_05610 PF01627 Hpt domain FM022_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_05610 PF02895 Signal transducing histidine kinase, homodimeric domain FM022_05610 PF09078 CheY binding FM022_05610 PF01584 CheW-like domain FM022_05615 PF01739 CheR methyltransferase, SAM binding domain FM022_05615 PF03705 CheR methyltransferase, all-alpha domain FM022_05620 PF03975 CheD chemotactic sensory transduction FM022_05625 PF00072 Response regulator receiver domain FM022_05625 PF01339 CheB methylesterase FM022_05635 PF07690 Major Facilitator Superfamily FM022_05640 PF18644 Phage integrase SAM-like domain FM022_05640 PF00589 Phage integrase family FM022_05660 PF01432 Peptidase family M3 FM022_05665 PF05175 Methyltransferase small domain FM022_05665 PF17827 PrmC N-terminal domain FM022_05670 PF04055 Radical SAM superfamily FM022_05670 PF06969 HemN C-terminal domain FM022_05675 PF00293 NUDIX domain FM022_05680 PF13840 ACT domain FM022_05680 PF01842 ACT domain FM022_05680 PF00696 Amino acid kinase family FM022_05705 PF01103 Surface antigen FM022_05705 PF07244 Surface antigen variable number repeat FM022_05710 PF04055 Radical SAM superfamily FM022_05715 PF05193 Peptidase M16 inactive domain FM022_05720 PF00749 tRNA synthetases class I (E and Q), catalytic domain FM022_05745 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FM022_05755 PF01588 Putative tRNA binding domain FM022_05755 PF09334 tRNA synthetases class I (M) FM022_05755 PF00133 tRNA synthetases class I (I, L, M and V) FM022_05775 PF02436 Conserved carboxylase domain FM022_05775 PF00682 HMGL-like FM022_05780 PF01293 Phosphoenolpyruvate carboxykinase FM022_05785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FM022_05785 PF00925 GTP cyclohydrolase II FM022_05805 PF02092 Glycyl-tRNA synthetase beta subunit FM022_05815 PF02069 Prokaryotic metallothionein FM022_05820 PF02527 rRNA small subunit methyltransferase G FM022_05825 PF00925 GTP cyclohydrolase II FM022_05830 PF00490 Delta-aminolevulinic acid dehydratase FM022_05840 PF00486 Transcriptional regulatory protein, C terminal FM022_05840 PF00072 Response regulator receiver domain FM022_05855 PF02867 Ribonucleotide reductase, barrel domain FM022_05855 PF00317 Ribonucleotide reductase, all-alpha domain FM022_05855 PF03477 ATP cone domain FM022_05860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FM022_05860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FM022_05865 PF04055 Radical SAM superfamily FM022_05865 PF06969 HemN C-terminal domain FM022_05885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FM022_05890 PF02540 NAD synthase FM022_05905 PF05099 Tellurite resistance protein TerB FM022_05905 PF00226 DnaJ domain FM022_05915 PF00902 Sec-independent protein translocase protein (TatC) FM022_05920 PF02547 Queuosine biosynthesis protein FM022_05925 PF00929 Exonuclease FM022_05940 PF12867 DinB superfamily FM022_05940 PF03781 Sulfatase-modifying factor enzyme 1 FM022_05960 PF02754 Cysteine-rich domain FM022_05960 PF13183 4Fe-4S dicluster domain FM022_05960 PF02665 Nitrate reductase gamma subunit FM022_05965 PF01790 Prolipoprotein diacylglyceryl transferase FM022_05980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FM022_05980 PF01367 5'-3' exonuclease, C-terminal SAM fold FM022_05980 PF01612 3'-5' exonuclease FM022_05980 PF00476 DNA polymerase family A FM022_05985 PF13302 Acetyltransferase (GNAT) domain FM022_05990 PF02348 Cytidylyltransferase FM022_06000 PF12399 Branched-chain amino acid ATP-binding cassette transporter FM022_06000 PF00005 ABC transporter FM022_06005 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FM022_06010 PF02885 Glycosyl transferase family, helical bundle domain FM022_06010 PF00591 Glycosyl transferase family, a/b domain FM022_06025 PF00764 Arginosuccinate synthase FM022_06030 PF00501 AMP-binding enzyme FM022_06030 PF13193 AMP-binding enzyme C-terminal domain FM022_06035 PF03062 MBOAT, membrane-bound O-acyltransferase family FM022_06045 PF00550 Phosphopantetheine attachment site FM022_06050 PF00132 Bacterial transferase hexapeptide (six repeats) FM022_06055 PF02080 TrkA-C domain FM022_06055 PF02254 TrkA-N domain FM022_06060 PF02386 Cation transport protein FM022_06065 PF00486 Transcriptional regulatory protein, C terminal FM022_06065 PF00072 Response regulator receiver domain FM022_06070 PF02702 Osmosensitive K+ channel His kinase sensor domain FM022_06070 PF13493 Domain of unknown function (DUF4118) FM022_06070 PF00512 His Kinase A (phospho-acceptor) domain FM022_06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_06085 PF02132 RecR protein FM022_06085 PF13662 Toprim domain FM022_06090 PF00226 DnaJ domain FM022_06090 PF01556 DnaJ C terminal domain FM022_06090 PF00684 DnaJ central domain FM022_06095 PF00291 Pyridoxal-phosphate dependent enzyme FM022_06115 PF00753 Metallo-beta-lactamase superfamily FM022_06125 PF00990 Diguanylate cyclase, GGDEF domain FM022_06130 PF08003 Protein of unknown function (DUF1698) FM022_06140 PF01578 Cytochrome C assembly protein FM022_06140 PF05140 ResB-like family FM022_06145 PF07687 Peptidase dimerisation domain FM022_06145 PF01546 Peptidase family M20/M25/M40 FM022_06155 PF02203 Tar ligand binding domain homologue FM022_06155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_06155 PF00672 HAMP domain FM022_06170 PF01043 SecA preprotein cross-linking domain FM022_06170 PF07517 SecA DEAD-like domain FM022_06170 PF07516 SecA Wing and Scaffold domain FM022_06170 PF00271 Helicase conserved C-terminal domain FM022_06170 PF02810 SEC-C motif FM022_06175 PF02687 FtsX-like permease family FM022_06175 PF12704 MacB-like periplasmic core domain FM022_06190 PF03971 Monomeric isocitrate dehydrogenase FM022_06195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FM022_06195 PF00056 lactate/malate dehydrogenase, NAD binding domain FM022_06220 PF01795 MraW methylase family FM022_06265 PF00115 Cytochrome C and Quinol oxidase polypeptide I FM022_06270 PF12833 Helix-turn-helix domain FM022_06270 PF00072 Response regulator receiver domain FM022_06280 PF02082 Transcriptional regulator FM022_06285 PF00115 Cytochrome C and Quinol oxidase polypeptide I FM022_06295 PF01266 FAD dependent oxidoreductase FM022_06295 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FM022_06305 PF00072 Response regulator receiver domain FM022_06315 PF00512 His Kinase A (phospho-acceptor) domain FM022_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_06320 PF01556 DnaJ C terminal domain FM022_06320 PF00226 DnaJ domain FM022_06325 PF13411 MerR HTH family regulatory protein FM022_06330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FM022_06335 PF00005 ABC transporter FM022_06350 PF03741 Integral membrane protein TerC family FM022_06355 PF05525 Branched-chain amino acid transport protein FM022_06375 PF02142 MGS-like domain FM022_06375 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FM022_06375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FM022_06385 PF06965 Na+/H+ antiporter 1 FM022_06395 PF00561 alpha/beta hydrolase fold FM022_06400 PF07715 TonB-dependent Receptor Plug Domain FM022_06400 PF00593 TonB dependent receptor FM022_06410 PF00091 Tubulin/FtsZ family, GTPase domain FM022_06410 PF12327 FtsZ family, C-terminal domain FM022_06415 PF02491 SHS2 domain inserted in FTSA FM022_06435 PF03960 ArsC family FM022_06475 PF14602 Hexapeptide repeat of succinyl-transferase FM022_06475 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FM022_06480 PF13419 Haloacid dehalogenase-like hydrolase FM022_06490 PF17764 3′ DNA-binding domain (3′BD) FM022_06490 PF00270 DEAD/DEAH box helicase FM022_06490 PF00271 Helicase conserved C-terminal domain FM022_06490 PF18074 Primosomal protein N C-terminal domain FM022_06490 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FM022_06515 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FM022_06520 PF00586 AIR synthase related protein, N-terminal domain FM022_06520 PF02769 AIR synthase related protein, C-terminal domain FM022_06530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FM022_06530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FM022_06535 PF01924 Hydrogenase formation hypA family FM022_06540 PF01455 HupF/HypC family FM022_06545 PF02492 CobW/HypB/UreG, nucleotide-binding domain FM022_06570 PF05661 Protein of unknown function (DUF808) FM022_06585 PF12823 Domain of unknown function (DUF3817) FM022_06595 PF02568 Thiamine biosynthesis protein (ThiI) FM022_06595 PF02926 THUMP domain FM022_06615 PF00708 Acylphosphatase FM022_06615 PF17788 HypF Kae1-like domain FM022_06615 PF01300 Telomere recombination FM022_06615 PF07503 HypF finger FM022_06625 PF01750 Hydrogenase maturation protease FM022_06630 PF01292 Prokaryotic cytochrome b561 FM022_06635 PF00374 Nickel-dependent hydrogenase FM022_06640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FM022_06640 PF10518 TAT (twin-arginine translocation) pathway signal sequence FM022_06640 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FM022_06665 PF01292 Prokaryotic cytochrome b561 FM022_06670 PF00374 Nickel-dependent hydrogenase FM022_06675 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FM022_06675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FM022_06675 PF10518 TAT (twin-arginine translocation) pathway signal sequence FM022_06685 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FM022_06685 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FM022_06690 PF00440 Bacterial regulatory proteins, tetR family FM022_06690 PF18665 Tetracyclin repressor-like, C-terminal domain FM022_06695 PF11791 Aconitate B N-terminal domain FM022_06695 PF00330 Aconitase family (aconitate hydratase) FM022_06695 PF06434 Aconitate hydratase 2 N-terminus FM022_06710 PF01709 Transcriptional regulator FM022_06715 PF04333 MlaA lipoprotein FM022_06730 PF03641 Possible lysine decarboxylase FM022_06735 PF13419 Haloacid dehalogenase-like hydrolase FM022_06740 PF08534 Redoxin FM022_06750 PF02600 Disulfide bond formation protein DsbB FM022_06770 PF00593 TonB dependent receptor FM022_06770 PF07660 Secretin and TonB N terminus short domain FM022_06770 PF07715 TonB-dependent Receptor Plug Domain FM022_06790 PF00999 Sodium/hydrogen exchanger family FM022_06790 PF02254 TrkA-N domain FM022_06800 PF00464 Serine hydroxymethyltransferase FM022_06805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FM022_06805 PF12833 Helix-turn-helix domain FM022_06805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FM022_06805 PF02805 Metal binding domain of Ada FM022_06825 PF00202 Aminotransferase class-III FM022_06830 PF03473 MOSC domain FM022_06835 PF04055 Radical SAM superfamily FM022_06840 PF10437 Bacterial lipoate protein ligase C-terminus FM022_06840 PF03099 Biotin/lipoate A/B protein ligase family FM022_06845 PF00456 Transketolase, thiamine diphosphate binding domain FM022_06845 PF17831 Pyruvate dehydrogenase E1 component middle domain FM022_06850 PF02817 e3 binding domain FM022_06850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FM022_06850 PF00364 Biotin-requiring enzyme FM022_06860 PF07685 CobB/CobQ-like glutamine amidotransferase domain FM022_06865 PF07660 Secretin and TonB N terminus short domain FM022_06865 PF07715 TonB-dependent Receptor Plug Domain FM022_06865 PF00593 TonB dependent receptor FM022_06870 PF01263 Aldose 1-epimerase FM022_06875 PF00905 Penicillin binding protein transpeptidase domain FM022_06880 PF00271 Helicase conserved C-terminal domain FM022_06880 PF00270 DEAD/DEAH box helicase FM022_06885 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FM022_06885 PF18381 YcaO cyclodehydratase C-terminal domain FM022_06900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_06900 PF00672 HAMP domain FM022_06900 PF02203 Tar ligand binding domain homologue FM022_06910 PF07836 DmpG-like communication domain FM022_06910 PF00682 HMGL-like FM022_06925 PF11799 impB/mucB/samB family C-terminal domain FM022_06925 PF00817 impB/mucB/samB family FM022_06925 PF11798 IMS family HHH motif FM022_06930 PF03453 MoeA N-terminal region (domain I and II) FM022_06930 PF03454 MoeA C-terminal region (domain IV) FM022_06930 PF00994 Probable molybdopterin binding domain FM022_06940 PF02634 FdhD/NarQ family FM022_06950 PF13247 4Fe-4S dicluster domain FM022_06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_06980 PF00512 His Kinase A (phospho-acceptor) domain FM022_07005 PF01841 Transglutaminase-like superfamily FM022_07015 PF13247 4Fe-4S dicluster domain FM022_07020 PF01568 Molydopterin dinucleotide binding domain FM022_07020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FM022_07020 PF00384 Molybdopterin oxidoreductase FM022_07030 PF02769 AIR synthase related protein, C-terminal domain FM022_07030 PF00586 AIR synthase related protein, N-terminal domain FM022_07090 PF00009 Elongation factor Tu GTP binding domain FM022_07090 PF09107 Elongation factor SelB, winged helix FM022_07090 PF09106 Elongation factor SelB, winged helix FM022_07090 PF09105 Elongation factor SelB, winged helix FM022_07090 PF03144 Elongation factor Tu domain 2 FM022_07135 PF08447 PAS fold FM022_07135 PF00989 PAS fold FM022_07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_07135 PF00512 His Kinase A (phospho-acceptor) domain FM022_07150 PF01966 HD domain FM022_07160 PF01243 Pyridoxamine 5'-phosphate oxidase FM022_07160 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FM022_07165 PF03707 Bacterial signalling protein N terminal repeat FM022_07165 PF00563 EAL domain FM022_07165 PF00990 Diguanylate cyclase, GGDEF domain FM022_07170 PF03880 DbpA RNA binding domain FM022_07170 PF00271 Helicase conserved C-terminal domain FM022_07170 PF00270 DEAD/DEAH box helicase FM022_07190 PF00183 Hsp90 protein FM022_07215 PF04403 Paraquat-inducible protein A FM022_07230 PF00563 EAL domain FM022_07230 PF00990 Diguanylate cyclase, GGDEF domain FM022_07230 PF08448 PAS fold FM022_07250 PF04073 Aminoacyl-tRNA editing domain FM022_07260 PF08713 DNA alkylation repair enzyme FM022_07270 PF01965 DJ-1/PfpI family FM022_07275 PF05175 Methyltransferase small domain FM022_07275 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus FM022_07280 PF07715 TonB-dependent Receptor Plug Domain FM022_07280 PF00593 TonB dependent receptor FM022_07280 PF07660 Secretin and TonB N terminus short domain FM022_07290 PF08281 Sigma-70, region 4 FM022_07290 PF04542 Sigma-70 region 2 FM022_07295 PF00491 Arginase family FM022_07300 PF00682 HMGL-like FM022_07300 PF08502 LeuA allosteric (dimerisation) domain FM022_07310 PF13673 Acetyltransferase (GNAT) domain FM022_07310 PF03352 Methyladenine glycosylase FM022_07310 PF00117 Glutamine amidotransferase class-I FM022_07310 PF00958 GMP synthase C terminal domain FM022_07310 PF13302 Acetyltransferase (GNAT) domain FM022_07315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FM022_07315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FM022_07320 PF00924 Mechanosensitive ion channel FM022_07325 PF02833 DHHA2 domain FM022_07325 PF01368 DHH family FM022_07340 PF10415 Fumarase C C-terminus FM022_07340 PF00206 Lyase FM022_07345 PF01048 Phosphorylase superfamily FM022_07350 PF00698 Acyl transferase domain FM022_07355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FM022_07370 PF04052 TolB amino-terminal domain FM022_07380 PF02472 Biopolymer transport protein ExbD/TolR FM022_07385 PF01618 MotA/TolQ/ExbB proton channel family FM022_07390 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FM022_07395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FM022_07395 PF02874 ATP synthase alpha/beta family, beta-barrel domain FM022_07400 PF00231 ATP synthase FM022_07405 PF02874 ATP synthase alpha/beta family, beta-barrel domain FM022_07405 PF00306 ATP synthase alpha/beta chain, C terminal domain FM022_07405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FM022_07410 PF00213 ATP synthase delta (OSCP) subunit FM022_07425 PF17762 HTH domain found in ParB protein FM022_07425 PF02195 ParB-like nuclease domain FM022_07430 PF13614 AAA domain FM022_07445 PF02911 Formyl transferase, C-terminal domain FM022_07445 PF00551 Formyl transferase FM022_07450 PF00696 Amino acid kinase family FM022_07455 PF01926 50S ribosome-binding GTPase FM022_07455 PF01018 GTP1/OBG FM022_07460 PF01016 Ribosomal L27 protein FM022_07465 PF00829 Ribosomal prokaryotic L21 protein FM022_07470 PF16730 DnaG-primase C-terminal, helicase-binding domain FM022_07470 PF13662 Toprim domain FM022_07470 PF01807 CHC2 zinc finger FM022_07470 PF08275 DNA primase catalytic core, N-terminal domain FM022_07480 PF14622 Ribonuclease-III-like FM022_07480 PF00035 Double-stranded RNA binding motif FM022_07485 PF01264 Chorismate synthase FM022_07495 PF01435 Peptidase family M48 FM022_07505 PF00300 Histidine phosphatase superfamily (branch 1) FM022_07515 PF01926 50S ribosome-binding GTPase FM022_07515 PF12631 MnmE helical domain FM022_07515 PF10396 GTP-binding protein TrmE N-terminus FM022_07525 PF02096 60Kd inner membrane protein FM022_07525 PF14849 YidC periplasmic domain FM022_07530 PF01809 Putative membrane protein insertion efficiency factor FM022_07535 PF00825 Ribonuclease P FM022_07540 PF00468 Ribosomal protein L34 FM022_07545 PF17871 AAA lid domain FM022_07545 PF02861 Clp amino terminal domain, pathogenicity island component FM022_07545 PF10431 C-terminal, D2-small domain, of ClpB protein FM022_07545 PF07724 AAA domain (Cdc48 subfamily) FM022_07545 PF00004 ATPase family associated with various cellular activities (AAA) FM022_07550 PF01351 Ribonuclease HII FM022_07560 PF03976 Polyphosphate kinase 2 (PPK2) FM022_07570 PF01625 Peptide methionine sulfoxide reductase FM022_07575 PF01641 SelR domain FM022_07580 PF01557 Fumarylacetoacetate (FAA) hydrolase family FM022_07595 PF06968 Biotin and Thiamin Synthesis associated domain FM022_07595 PF04055 Radical SAM superfamily FM022_07595 PF00202 Aminotransferase class-III FM022_07600 PF00512 His Kinase A (phospho-acceptor) domain FM022_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_07605 PF02142 MGS-like domain FM022_07605 PF01808 AICARFT/IMPCHase bienzyme FM022_07610 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FM022_07610 PF02769 AIR synthase related protein, C-terminal domain FM022_07610 PF00586 AIR synthase related protein, N-terminal domain FM022_07620 PF08525 Opacity-associated protein A N-terminal motif FM022_07620 PF01551 Peptidase family M23 FM022_07620 PF01476 LysM domain FM022_07625 PF01227 GTP cyclohydrolase I FM022_07630 PF01544 CorA-like Mg2+ transporter protein FM022_07640 PF00437 Type II/IV secretion system protein FM022_07655 PF01926 50S ribosome-binding GTPase FM022_07655 PF07650 KH domain FM022_07675 PF00665 Integrase core domain FM022_07700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_07700 PF02203 Tar ligand binding domain homologue FM022_07700 PF00672 HAMP domain FM022_07715 PF01327 Polypeptide deformylase FM022_07720 PF00574 Clp protease FM022_07725 PF05698 Bacterial trigger factor protein (TF) C-terminus FM022_07725 PF05697 Bacterial trigger factor protein (TF) FM022_07725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FM022_07730 PF03976 Polyphosphate kinase 2 (PPK2) FM022_07735 PF03976 Polyphosphate kinase 2 (PPK2) FM022_07740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FM022_07745 PF16653 Saccharopine dehydrogenase C-terminal domain FM022_07745 PF03435 Saccharopine dehydrogenase NADP binding domain FM022_07765 PF01053 Cys/Met metabolism PLP-dependent enzyme FM022_07770 PF01053 Cys/Met metabolism PLP-dependent enzyme FM022_07775 PF00072 Response regulator receiver domain FM022_07775 PF00486 Transcriptional regulatory protein, C terminal FM022_07780 PF02203 Tar ligand binding domain homologue FM022_07780 PF00672 HAMP domain FM022_07780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_07790 PF11849 Domain of unknown function (DUF3369) FM022_07795 PF02203 Tar ligand binding domain homologue FM022_07795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_07795 PF00672 HAMP domain FM022_07800 PF00512 His Kinase A (phospho-acceptor) domain FM022_07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_07820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FM022_07855 PF06965 Na+/H+ antiporter 1 FM022_07860 PF03150 Di-haem cytochrome c peroxidase FM022_07890 PF00137 ATP synthase subunit C FM022_07915 PF08543 Phosphomethylpyrimidine kinase FM022_07920 PF00171 Aldehyde dehydrogenase family FM022_07945 PF12833 Helix-turn-helix domain FM022_07945 PF00072 Response regulator receiver domain FM022_07960 PF00795 Carbon-nitrogen hydrolase FM022_07980 PF00258 Flavodoxin FM022_07985 PF01475 Ferric uptake regulator family FM022_07995 PF04376 Arginine-tRNA-protein transferase, N terminus FM022_07995 PF04377 Arginine-tRNA-protein transferase, C terminus FM022_08000 PF00290 Tryptophan synthase alpha chain FM022_08005 PF02548 Ketopantoate hydroxymethyltransferase FM022_08015 PF01594 AI-2E family transporter FM022_08055 PF04055 Radical SAM superfamily FM022_08060 PF01208 Uroporphyrinogen decarboxylase (URO-D) FM022_08070 PF02774 Semialdehyde dehydrogenase, dimerisation domain FM022_08070 PF01118 Semialdehyde dehydrogenase, NAD binding domain FM022_08075 PF03989 DNA gyrase C-terminal domain, beta-propeller FM022_08075 PF00521 DNA gyrase/topoisomerase IV, subunit A FM022_08085 PF01960 ArgJ family FM022_08095 PF00830 Ribosomal L28 family FM022_08110 PF01370 NAD dependent epimerase/dehydratase family FM022_08115 PF01467 Cytidylyltransferase-like FM022_08115 PF00294 pfkB family carbohydrate kinase FM022_08160 PF00534 Glycosyl transferases group 1 FM022_08160 PF13439 Glycosyltransferase Family 4 FM022_08185 PF03062 MBOAT, membrane-bound O-acyltransferase family FM022_08195 PF03062 MBOAT, membrane-bound O-acyltransferase family FM022_08225 PF16363 GDP-mannose 4,6 dehydratase FM022_08230 PF04321 RmlD substrate binding domain FM022_08235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FM022_08240 PF00483 Nucleotidyl transferase FM022_08260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FM022_08270 PF00037 4Fe-4S binding domain FM022_08280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FM022_08280 PF07992 Pyridine nucleotide-disulphide oxidoreductase FM022_08285 PF01645 Conserved region in glutamate synthase FM022_08285 PF04898 Glutamate synthase central domain FM022_08285 PF01493 GXGXG motif FM022_08285 PF00310 Glutamine amidotransferases class-II FM022_08300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_08300 PF02203 Tar ligand binding domain homologue FM022_08300 PF00672 HAMP domain FM022_08305 PF02203 Tar ligand binding domain homologue FM022_08305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_08305 PF00672 HAMP domain FM022_08310 PF00263 Bacterial type II and III secretion system protein FM022_08310 PF03958 Bacterial type II/III secretion system short domain FM022_08315 PF01205 Uncharacterized protein family UPF0029 FM022_08315 PF09186 Domain of unknown function (DUF1949) FM022_08320 PF01728 FtsJ-like methyltransferase FM022_08320 PF01479 S4 domain FM022_08325 PF01687 Riboflavin kinase FM022_08325 PF06574 FAD synthetase FM022_08330 PF13649 Methyltransferase domain FM022_08335 PF00578 AhpC/TSA family FM022_08360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FM022_08370 PF00793 DAHP synthetase I family FM022_08375 PF00885 6,7-dimethyl-8-ribityllumazine synthase FM022_08380 PF01029 NusB family FM022_08385 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FM022_08440 PF00005 ABC transporter FM022_08450 PF04023 FeoA domain FM022_08455 PF17910 FeoB cytosolic helical domain FM022_08455 PF07664 Ferrous iron transport protein B C terminus FM022_08455 PF02421 Ferrous iron transport protein B FM022_08455 PF07670 Nucleoside recognition FM022_08455 PF04023 FeoA domain FM022_08480 PF00403 Heavy-metal-associated domain FM022_08485 PF01022 Bacterial regulatory protein, arsR family FM022_08490 PF07715 TonB-dependent Receptor Plug Domain FM022_08490 PF00593 TonB dependent receptor FM022_08500 PF00873 AcrB/AcrD/AcrF family FM022_08515 PF00313 'Cold-shock' DNA-binding domain FM022_08520 PF00072 Response regulator receiver domain FM022_08520 PF00486 Transcriptional regulatory protein, C terminal FM022_08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_08525 PF00512 His Kinase A (phospho-acceptor) domain FM022_08525 PF00989 PAS fold FM022_08555 PF03594 Benzoate membrane transport protein FM022_08570 PF05000 RNA polymerase Rpb1, domain 4 FM022_08570 PF04983 RNA polymerase Rpb1, domain 3 FM022_08570 PF00623 RNA polymerase Rpb1, domain 2 FM022_08570 PF04998 RNA polymerase Rpb1, domain 5 FM022_08570 PF04997 RNA polymerase Rpb1, domain 1 FM022_08575 PF04563 RNA polymerase beta subunit FM022_08575 PF04565 RNA polymerase Rpb2, domain 3 FM022_08575 PF10385 RNA polymerase beta subunit external 1 domain FM022_08575 PF00562 RNA polymerase Rpb2, domain 6 FM022_08575 PF04560 RNA polymerase Rpb2, domain 7 FM022_08575 PF04561 RNA polymerase Rpb2, domain 2 FM022_08580 PF00542 Ribosomal protein L7/L12 C-terminal domain FM022_08580 PF16320 Ribosomal protein L7/L12 dimerisation domain FM022_08585 PF00466 Ribosomal protein L10 FM022_08590 PF00687 Ribosomal protein L1p/L10e family FM022_08595 PF00298 Ribosomal protein L11, RNA binding domain FM022_08595 PF03946 Ribosomal protein L11, N-terminal domain FM022_08600 PF02357 Transcription termination factor nusG FM022_08615 PF00471 Ribosomal protein L33 FM022_08620 PF00009 Elongation factor Tu GTP binding domain FM022_08620 PF03144 Elongation factor Tu domain 2 FM022_08620 PF03143 Elongation factor Tu C-terminal domain FM022_08645 PF08245 Mur ligase middle domain FM022_08650 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FM022_08650 PF00953 Glycosyl transferase family 4 FM022_08655 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FM022_08655 PF01676 Metalloenzyme superfamily FM022_08660 PF00005 ABC transporter FM022_08660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FM022_08665 PF00912 Transglycosylase FM022_08665 PF00905 Penicillin binding protein transpeptidase domain FM022_08675 PF03062 MBOAT, membrane-bound O-acyltransferase family FM022_08680 PF03951 Glutamine synthetase, beta-Grasp domain FM022_08680 PF00120 Glutamine synthetase, catalytic domain FM022_08690 PF02391 MoaE protein FM022_08700 PF02621 Menaquinone biosynthesis FM022_08705 PF02673 Bacitracin resistance protein BacA FM022_08715 PF01098 Cell cycle protein FM022_08725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FM022_08765 PF00004 ATPase family associated with various cellular activities (AAA) FM022_08765 PF07724 AAA domain (Cdc48 subfamily) FM022_08765 PF17871 AAA lid domain FM022_08765 PF02861 Clp amino terminal domain, pathogenicity island component FM022_08765 PF10431 C-terminal, D2-small domain, of ClpB protein FM022_08770 PF02617 ATP-dependent Clp protease adaptor protein ClpS FM022_08785 PF00501 AMP-binding enzyme FM022_08785 PF13193 AMP-binding enzyme C-terminal domain FM022_08790 PF01575 MaoC like domain FM022_08810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_08810 PF00672 HAMP domain FM022_08810 PF02203 Tar ligand binding domain homologue FM022_08815 PF02040 Arsenical pump membrane protein FM022_08835 PF01451 Low molecular weight phosphotyrosine protein phosphatase FM022_08840 PF01613 Flavin reductase like domain FM022_08850 PF00771 FHIPEP family FM022_08855 PF00669 Bacterial flagellin N-terminal helical region FM022_08855 PF00700 Bacterial flagellin C-terminal helical region FM022_08860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FM022_08860 PF18269 T3SS EscN ATPase C-terminal domain FM022_08870 PF01312 FlhB HrpN YscU SpaS Family FM022_08885 PF00460 Flagella basal body rod protein FM022_08885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FM022_08890 PF02049 Flagellar hook-basal body complex protein FliE FM022_08900 PF10609 NUBPL iron-transfer P-loop NTPase FM022_08905 PF00448 SRP54-type protein, GTPase domain FM022_08925 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FM022_08945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FM022_08945 PF00460 Flagella basal body rod protein FM022_08945 PF07196 Flagellin hook IN motif FM022_08945 PF07559 Flagellar basal body protein FlaE FM022_08960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FM022_08970 PF01706 FliG C-terminal domain FM022_08970 PF14842 FliG N-terminal domain FM022_08970 PF14841 FliG middle domain FM022_08975 PF01514 Secretory protein of YscJ/FliF family FM022_08975 PF08345 Flagellar M-ring protein C-terminal FM022_08980 PF00460 Flagella basal body rod protein FM022_08985 PF00460 Flagella basal body rod protein FM022_08985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FM022_08995 PF00072 Response regulator receiver domain FM022_09000 PF00460 Flagella basal body rod protein FM022_09000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FM022_09015 PF01782 RimM N-terminal domain FM022_09025 PF00886 Ribosomal protein S16 FM022_09030 PF02978 Signal peptide binding domain FM022_09030 PF02881 SRP54-type protein, helical bundle domain FM022_09030 PF00448 SRP54-type protein, GTPase domain FM022_09035 PF00849 RNA pseudouridylate synthase FM022_09040 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FM022_09040 PF00534 Glycosyl transferases group 1 FM022_09050 PF01784 NIF3 (NGG1p interacting factor 3) FM022_09055 PF02091 Glycyl-tRNA synthetase alpha subunit FM022_09065 PF00731 AIR carboxylase FM022_09080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_09080 PF00672 HAMP domain FM022_09080 PF17200 Single Cache domain 2 FM022_09080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_09080 PF00672 HAMP domain FM022_09080 PF17200 Single Cache domain 2 FM022_09085 PF13476 AAA domain FM022_09090 PF01513 ATP-NAD kinase FM022_09095 PF14492 Elongation Factor G, domain II FM022_09095 PF03144 Elongation factor Tu domain 2 FM022_09095 PF00679 Elongation factor G C-terminus FM022_09095 PF03764 Elongation factor G, domain IV FM022_09095 PF00009 Elongation factor Tu GTP binding domain FM022_09100 PF00177 Ribosomal protein S7p/S5e FM022_09105 PF00164 Ribosomal protein S12/S23 FM022_09120 PF07715 TonB-dependent Receptor Plug Domain FM022_09120 PF00593 TonB dependent receptor FM022_09135 PF00005 ABC transporter FM022_09140 PF00528 Binding-protein-dependent transport system inner membrane component FM022_09180 PF00117 Glutamine amidotransferase class-I FM022_09185 PF13416 Bacterial extracellular solute-binding protein FM022_09190 PF00528 Binding-protein-dependent transport system inner membrane component FM022_09195 PF00005 ABC transporter FM022_09195 PF08402 TOBE domain FM022_09205 PF07715 TonB-dependent Receptor Plug Domain FM022_09205 PF00593 TonB dependent receptor FM022_09225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FM022_09225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FM022_09250 PF03477 ATP cone domain FM022_09250 PF02867 Ribonucleotide reductase, barrel domain FM022_09250 PF00317 Ribonucleotide reductase, all-alpha domain FM022_09260 PF01042 Endoribonuclease L-PSP FM022_09275 PF00155 Aminotransferase class I and II FM022_09285 PF09335 SNARE associated Golgi protein FM022_09290 PF01245 Ribosomal protein L19 FM022_09295 PF01746 tRNA (Guanine-1)-methyltransferase FM022_09305 PF01717 Cobalamin-independent synthase, Catalytic domain FM022_09305 PF08267 Cobalamin-independent synthase, N-terminal domain FM022_09310 PF00291 Pyridoxal-phosphate dependent enzyme FM022_09310 PF13291 ACT domain FM022_09315 PF00119 ATP synthase A chain FM022_09325 PF05538 Campylobacter major outer membrane protein FM022_09335 PF02660 Glycerol-3-phosphate acyltransferase FM022_09340 PF02445 Quinolinate synthetase A protein FM022_09345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FM022_09345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FM022_09360 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FM022_09370 PF08544 GHMP kinases C terminal FM022_09370 PF00288 GHMP kinases N terminal domain FM022_09385 PF02033 Ribosome-binding factor A FM022_09390 PF02576 RimP N-terminal domain FM022_09395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FM022_09395 PF01872 RibD C-terminal domain FM022_09400 PF09285 Elongation factor P, C-terminal FM022_09400 PF08207 Elongation factor P (EF-P) KOW-like domain FM022_09400 PF01132 Elongation factor P (EF-P) OB domain FM022_09405 PF01842 ACT domain FM022_09405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FM022_09405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FM022_09410 PF00575 S1 RNA binding domain FM022_09415 PF02401 LytB protein FM022_09420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FM022_09425 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FM022_09425 PF01588 Putative tRNA binding domain FM022_09425 PF03147 Ferredoxin-fold anticodon binding domain FM022_09425 PF03484 tRNA synthetase B5 domain FM022_09430 PF01409 tRNA synthetases class II core domain (F) FM022_09430 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FM022_09435 PF01230 HIT domain FM022_09440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FM022_09445 PF02801 Beta-ketoacyl synthase, C-terminal domain FM022_09445 PF00109 Beta-ketoacyl synthase, N-terminal domain FM022_09450 PF00550 Phosphopantetheine attachment site FM022_09460 PF04055 Radical SAM superfamily FM022_09470 PF06508 Queuosine biosynthesis protein QueC FM022_09480 PF04452 RNA methyltransferase FM022_09490 PF00033 Cytochrome b/b6/petB FM022_09490 PF00032 Cytochrome b(C-terminal)/b6/petD FM022_09495 PF00355 Rieske [2Fe-2S] domain FM022_09500 PF00291 Pyridoxal-phosphate dependent enzyme FM022_09505 PF00696 Amino acid kinase family FM022_09510 PF00580 UvrD/REP helicase N-terminal domain FM022_09510 PF13361 UvrD-like helicase C-terminal domain FM022_09520 PF03462 PCRF domain FM022_09520 PF00472 RF-1 domain FM022_09525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FM022_09550 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FM022_09550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FM022_09565 PF00115 Cytochrome C and Quinol oxidase polypeptide I FM022_09570 PF01668 SmpB protein FM022_09575 PF00288 GHMP kinases N terminal domain FM022_09580 PF01509 TruB family pseudouridylate synthase (N terminal domain) FM022_09585 PF13361 UvrD-like helicase C-terminal domain FM022_09585 PF00580 UvrD/REP helicase N-terminal domain FM022_09590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FM022_09590 PF03466 LysR substrate binding domain FM022_09595 PF16199 Radical_SAM C-terminal domain FM022_09595 PF04055 Radical SAM superfamily FM022_09600 PF13537 Glutamine amidotransferase domain FM022_09600 PF00156 Phosphoribosyl transferase domain FM022_09605 PF01113 Dihydrodipicolinate reductase, N-terminus FM022_09605 PF05173 Dihydrodipicolinate reductase, C-terminus FM022_09610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FM022_09615 PF00085 Thioredoxin FM022_09620 PF02272 DHHA1 domain FM022_09620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FM022_09620 PF01411 tRNA synthetases class II (A) FM022_09645 PF00512 His Kinase A (phospho-acceptor) domain FM022_09645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_09645 PF00672 HAMP domain FM022_09650 PF00486 Transcriptional regulatory protein, C terminal FM022_09650 PF00072 Response regulator receiver domain FM022_09655 PF17820 PDZ domain FM022_09655 PF13180 PDZ domain FM022_09660 PF00920 Dehydratase family FM022_09690 PF00005 ABC transporter FM022_09690 PF09383 NIL domain FM022_09710 PF15437 Plasminogen-binding protein pgbA C-terminal FM022_09725 PF01259 SAICAR synthetase FM022_09730 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FM022_09745 PF01553 Acyltransferase FM022_09750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FM022_09755 PF02416 mttA/Hcf106 family FM022_09760 PF02416 mttA/Hcf106 family FM022_09765 PF03485 Arginyl tRNA synthetase N terminal domain FM022_09765 PF00750 tRNA synthetases class I (R) FM022_09765 PF05746 DALR anticodon binding domain FM022_09775 PF01467 Cytidylyltransferase-like FM022_09780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FM022_09780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FM022_09785 PF00162 Phosphoglycerate kinase FM022_09800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FM022_09800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FM022_09805 PF00800 Prephenate dehydratase FM022_09805 PF01817 Chorismate mutase type II FM022_09805 PF01842 ACT domain FM022_09810 PF00155 Aminotransferase class I and II FM022_09815 PF02779 Transketolase, pyrimidine binding domain FM022_09815 PF02780 Transketolase, C-terminal domain FM022_09815 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FM022_09820 PF00034 Cytochrome c FM022_09820 PF03150 Di-haem cytochrome c peroxidase FM022_09835 PF03814 Potassium-transporting ATPase A subunit FM022_09855 PF00877 NlpC/P60 family FM022_09870 PF03167 Uracil DNA glycosylase superfamily FM022_09875 PF00171 Aldehyde dehydrogenase family FM022_09880 PF00205 Thiamine pyrophosphate enzyme, central domain FM022_09880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FM022_09880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FM022_09885 PF04011 LemA family FM022_09900 PF13419 Haloacid dehalogenase-like hydrolase FM022_09920 PF07690 Major Facilitator Superfamily FM022_09930 PF00072 Response regulator receiver domain FM022_09930 PF00990 Diguanylate cyclase, GGDEF domain FM022_09935 PF00529 HlyD membrane-fusion protein of T1SS FM022_09935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FM022_09940 PF00873 AcrB/AcrD/AcrF family FM022_09945 PF02321 Outer membrane efflux protein FM022_09980 PF01053 Cys/Met metabolism PLP-dependent enzyme FM022_09985 PF02082 Transcriptional regulator FM022_09990 PF00291 Pyridoxal-phosphate dependent enzyme FM022_10000 PF01507 Phosphoadenosine phosphosulfate reductase family FM022_10005 PF01507 Phosphoadenosine phosphosulfate reductase family FM022_10010 PF00009 Elongation factor Tu GTP binding domain FM022_10015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FM022_10015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FM022_10065 PF00939 Sodium:sulfate symporter transmembrane region FM022_10075 PF02683 Cytochrome C biogenesis protein transmembrane region FM022_10075 PF11412 Disulphide bond corrector protein DsbC FM022_10080 PF08443 RimK-like ATP-grasp domain FM022_10080 PF18030 RimK PreATP-grasp domain FM022_10095 PF00990 Diguanylate cyclase, GGDEF domain FM022_10095 PF10442 FIST C domain FM022_10095 PF08495 FIST N domain FM022_10095 PF00563 EAL domain FM022_10100 PF02666 Phosphatidylserine decarboxylase FM022_10110 PF03562 MltA specific insert domain FM022_10110 PF06725 3D domain FM022_10115 PF00012 Hsp70 protein FM022_10120 PF01025 GrpE FM022_10125 PF01628 HrcA protein C terminal domain FM022_10135 PF01416 tRNA pseudouridine synthase FM022_10150 PF01255 Putative undecaprenyl diphosphate synthase FM022_10155 PF02441 Flavoprotein FM022_10155 PF04127 DNA / pantothenate metabolism flavoprotein FM022_10160 PF12804 MobA-like NTP transferase domain FM022_10160 PF14602 Hexapeptide repeat of succinyl-transferase FM022_10170 PF00271 Helicase conserved C-terminal domain FM022_10170 PF08148 DSHCT (NUC185) domain FM022_10170 PF00270 DEAD/DEAH box helicase FM022_10175 PF05958 tRNA (Uracil-5-)-methyltransferase FM022_10180 PF00293 NUDIX domain FM022_10210 PF01134 Glucose inhibited division protein A FM022_10210 PF13932 GidA associated domain FM022_10215 PF00677 Lumazine binding domain FM022_10230 PF10431 C-terminal, D2-small domain, of ClpB protein FM022_10230 PF06689 ClpX C4-type zinc finger FM022_10230 PF07724 AAA domain (Cdc48 subfamily) FM022_10235 PF00132 Bacterial transferase hexapeptide (six repeats) FM022_10235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FM022_10240 PF07977 FabA-like domain FM022_10245 PF02684 Lipid-A-disaccharide synthetase FM022_10250 PF02677 Epoxyqueuosine reductase QueH FM022_10260 PF07992 Pyridine nucleotide-disulphide oxidoreductase FM022_10265 PF01261 Xylose isomerase-like TIM barrel FM022_10270 PF02321 Outer membrane efflux protein FM022_10280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FM022_10280 PF00529 HlyD membrane-fusion protein of T1SS FM022_10290 PF07690 Major Facilitator Superfamily FM022_10295 PF01740 STAS domain FM022_10295 PF00916 Sulfate permease family FM022_10315 PF00004 ATPase family associated with various cellular activities (AAA) FM022_10315 PF17758 Proteasomal ATPase OB N-terminal domain FM022_10315 PF16450 Proteasomal ATPase OB C-terminal domain FM022_10320 PF08308 PEGA domain FM022_10320 PF03781 Sulfatase-modifying factor enzyme 1 FM022_10325 PF02621 Menaquinone biosynthesis FM022_10330 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FM022_10335 PF13368 Topoisomerase C-terminal repeat FM022_10335 PF01751 Toprim domain FM022_10335 PF01131 DNA topoisomerase FM022_10345 PF06968 Biotin and Thiamin Synthesis associated domain FM022_10345 PF04055 Radical SAM superfamily FM022_10360 PF03952 Enolase, N-terminal domain FM022_10360 PF00113 Enolase, C-terminal TIM barrel domain FM022_10365 PF00154 recA bacterial DNA recombination protein FM022_10375 PF02719 Polysaccharide biosynthesis protein FM022_10380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FM022_10390 PF08666 SAF domain FM022_10390 PF03102 NeuB family FM022_10410 PF02222 ATP-grasp domain FM022_10430 PF00669 Bacterial flagellin N-terminal helical region FM022_10430 PF00700 Bacterial flagellin C-terminal helical region FM022_10430 PF07196 Flagellin hook IN motif FM022_10435 PF00669 Bacterial flagellin N-terminal helical region FM022_10435 PF07196 Flagellin hook IN motif FM022_10435 PF00700 Bacterial flagellin C-terminal helical region FM022_10440 PF12801 4Fe-4S binding domain FM022_10440 PF13746 4Fe-4S dicluster domain FM022_10440 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FM022_10445 PF06418 CTP synthase N-terminus FM022_10445 PF00117 Glutamine amidotransferase class-I FM022_10450 PF17768 RecJ OB domain FM022_10450 PF02272 DHHA1 domain FM022_10450 PF01368 DHH family FM022_10475 PF02811 PHP domain FM022_10475 PF14579 Helix-hairpin-helix motif FM022_10475 PF07733 Bacterial DNA polymerase III alpha NTPase domain FM022_10475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FM022_10480 PF01975 Survival protein SurE FM022_10495 PF01967 MoaC family FM022_10500 PF01165 Ribosomal protein S21 FM022_10575 PF03883 Peroxide stress protein YaaA FM022_10605 PF02203 Tar ligand binding domain homologue FM022_10605 PF00672 HAMP domain FM022_10605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FM022_10610 PF00899 ThiF family FM022_10610 PF00581 Rhodanese-like domain FM022_10625 PF08379 Bacterial transglutaminase-like N-terminal region FM022_10625 PF01841 Transglutaminase-like superfamily FM022_10630 PF12857 TOBE-like domain FM022_10630 PF00005 ABC transporter FM022_10630 PF17850 CysA C-terminal regulatory domain FM022_10635 PF00528 Binding-protein-dependent transport system inner membrane component FM022_10645 PF00291 Pyridoxal-phosphate dependent enzyme FM022_10655 PF02597 ThiS family FM022_10665 PF00291 Pyridoxal-phosphate dependent enzyme FM022_10670 PF00528 Binding-protein-dependent transport system inner membrane component FM022_10675 PF00005 ABC transporter FM022_10685 PF00296 Luciferase-like monooxygenase FM022_10690 PF09084 NMT1/THI5 like FM022_10700 PF00005 ABC transporter FM022_10705 PF00528 Binding-protein-dependent transport system inner membrane component FM022_10715 PF09084 NMT1/THI5 like FM022_10740 PF14403 Circularly permuted ATP-grasp type 2 FM022_10750 PF04143 Sulphur transport FM022_10755 PF01206 Sulfurtransferase TusA FM022_10775 PF00593 TonB dependent receptor FM022_10775 PF07715 TonB-dependent Receptor Plug Domain FM022_10790 PF08448 PAS fold FM022_10790 PF00990 Diguanylate cyclase, GGDEF domain FM022_10805 PF01219 Prokaryotic diacylglycerol kinase FM022_10835 PF00486 Transcriptional regulatory protein, C terminal FM022_10835 PF00072 Response regulator receiver domain FM022_10840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FM022_10840 PF00512 His Kinase A (phospho-acceptor) domain FM022_10840 PF00672 HAMP domain FM022_10845 PF08241 Methyltransferase domain FM022_10850 PF12833 Helix-turn-helix domain FM022_10855 PF11849 Domain of unknown function (DUF3369) FM022_10860 PF02511 Thymidylate synthase complementing protein FM022_10875 PF02911 Formyl transferase, C-terminal domain FM022_10875 PF00551 Formyl transferase FM022_10880 PF02075 Crossover junction endodeoxyribonuclease RuvC