locus-tag class description HOO33_00005 PF00308 Bacterial dnaA protein HOO33_00005 PF11638 DnaA N-terminal domain HOO33_00005 PF08299 Bacterial dnaA protein helix-turn-helix HOO33_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HOO33_00010 PF02767 DNA polymerase III beta subunit, central domain HOO33_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HOO33_00015 PF00986 DNA gyrase B subunit, carboxyl terminus HOO33_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_00015 PF01751 Toprim domain HOO33_00015 PF00204 DNA gyrase B HOO33_00020 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO33_00025 PF14489 QueF-like protein HOO33_00045 PF13649 Methyltransferase domain HOO33_00050 PF08402 TOBE domain HOO33_00050 PF00005 ABC transporter HOO33_00055 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO33_00070 PF03459 TOBE domain HOO33_00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO33_00080 PF03466 LysR substrate binding domain HOO33_00110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO33_00110 PF00529 HlyD membrane-fusion protein of T1SS HOO33_00115 PF00873 AcrB/AcrD/AcrF family HOO33_00120 PF02321 Outer membrane efflux protein HOO33_00125 PF00672 HAMP domain HOO33_00125 PF02203 Tar ligand binding domain homologue HOO33_00125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_00130 PF00672 HAMP domain HOO33_00130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_00130 PF02203 Tar ligand binding domain homologue HOO33_00145 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO33_00150 PF02082 Transcriptional regulator HOO33_00155 PF00291 Pyridoxal-phosphate dependent enzyme HOO33_00165 PF01507 Phosphoadenosine phosphosulfate reductase family HOO33_00170 PF01507 Phosphoadenosine phosphosulfate reductase family HOO33_00175 PF00009 Elongation factor Tu GTP binding domain HOO33_00185 PF07690 Major Facilitator Superfamily HOO33_00190 PF00210 Ferritin-like domain HOO33_00195 PF13419 Haloacid dehalogenase-like hydrolase HOO33_00200 PF00205 Thiamine pyrophosphate enzyme, central domain HOO33_00200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO33_00200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO33_00205 PF00171 Aldehyde dehydrogenase family HOO33_00210 PF03167 Uracil DNA glycosylase superfamily HOO33_00225 PF03883 Peroxide stress protein YaaA HOO33_00230 PF01544 CorA-like Mg2+ transporter protein HOO33_00245 PF00156 Phosphoribosyl transferase domain HOO33_00250 PF01765 Ribosome recycling factor HOO33_00255 PF03840 Preprotein translocase SecG subunit HOO33_00265 PF17792 ThiD2 family HOO33_00265 PF02581 Thiamine monophosphate synthase HOO33_00270 PF01027 Inhibitor of apoptosis-promoting Bax1 HOO33_00300 PF01926 50S ribosome-binding GTPase HOO33_00300 PF07650 KH domain HOO33_00405 PF00665 Integrase core domain HOO33_00410 PF01695 IstB-like ATP binding protein HOO33_00580 PF02086 D12 class N6 adenine-specific DNA methyltransferase HOO33_00600 PF00437 Type II/IV secretion system protein HOO33_00605 PF00482 Type II secretion system (T2SS), protein F HOO33_00610 PF01544 CorA-like Mg2+ transporter protein HOO33_00615 PF01227 GTP cyclohydrolase I HOO33_00695 PF08402 TOBE domain HOO33_00695 PF00005 ABC transporter HOO33_00700 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_00705 PF13416 Bacterial extracellular solute-binding protein HOO33_00715 PF00117 Glutamine amidotransferase class-I HOO33_00765 PF02677 Epoxyqueuosine reductase QueH HOO33_00770 PF02684 Lipid-A-disaccharide synthetase HOO33_00775 PF07977 FabA-like domain HOO33_00780 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HOO33_00780 PF00132 Bacterial transferase hexapeptide (six repeats) HOO33_00785 PF07724 AAA domain (Cdc48 subfamily) HOO33_00785 PF06689 ClpX C4-type zinc finger HOO33_00785 PF10431 C-terminal, D2-small domain, of ClpB protein HOO33_00800 PF00677 Lumazine binding domain HOO33_00805 PF01134 Glucose inhibited division protein A HOO33_00805 PF13932 GidA associated domain HOO33_00810 PF01261 Xylose isomerase-like TIM barrel HOO33_00815 PF00106 short chain dehydrogenase HOO33_00820 PF01740 STAS domain HOO33_00820 PF00916 Sulfate permease family HOO33_00835 PF16450 Proteasomal ATPase OB C-terminal domain HOO33_00835 PF00004 ATPase family associated with various cellular activities (AAA) HOO33_00835 PF17758 Proteasomal ATPase OB N-terminal domain HOO33_00845 PF02621 Menaquinone biosynthesis HOO33_00850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HOO33_00855 PF01131 DNA topoisomerase HOO33_00855 PF01751 Toprim domain HOO33_00855 PF13368 Topoisomerase C-terminal repeat HOO33_00865 PF04055 Radical SAM superfamily HOO33_00865 PF06968 Biotin and Thiamin Synthesis associated domain HOO33_00870 PF00154 recA bacterial DNA recombination protein HOO33_00880 PF02719 Polysaccharide biosynthesis protein HOO33_00885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO33_00890 PF02348 Cytidylyltransferase HOO33_00905 PF08666 SAF domain HOO33_00905 PF03102 NeuB family HOO33_00925 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HOO33_00935 PF00501 AMP-binding enzyme HOO33_00935 PF13193 AMP-binding enzyme C-terminal domain HOO33_00935 PF01553 Acyltransferase HOO33_00945 PF00266 Aminotransferase class-V HOO33_00955 PF00483 Nucleotidyl transferase HOO33_00965 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HOO33_00970 PF00535 Glycosyl transferase family 2 HOO33_00970 PF01501 Glycosyl transferase family 8 HOO33_00975 PF01476 LysM domain HOO33_00995 PF02719 Polysaccharide biosynthesis protein HOO33_01000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO33_01015 PF08666 SAF domain HOO33_01015 PF03102 NeuB family HOO33_01020 PF02350 UDP-N-acetylglucosamine 2-epimerase HOO33_01025 PF00483 Nucleotidyl transferase HOO33_01030 PF02348 Cytidylyltransferase HOO33_01030 PF13472 GDSL-like Lipase/Acylhydrolase family HOO33_01040 PF00483 Nucleotidyl transferase HOO33_01045 PF16363 GDP-mannose 4,6 dehydratase HOO33_01050 PF01370 NAD dependent epimerase/dehydratase family HOO33_01065 PF00669 Bacterial flagellin N-terminal helical region HOO33_01065 PF00700 Bacterial flagellin C-terminal helical region HOO33_01065 PF07196 Flagellin hook IN motif HOO33_01070 PF00669 Bacterial flagellin N-terminal helical region HOO33_01070 PF07196 Flagellin hook IN motif HOO33_01070 PF00700 Bacterial flagellin C-terminal helical region HOO33_01085 PF05958 tRNA (Uracil-5-)-methyltransferase HOO33_01100 PF00270 DEAD/DEAH box helicase HOO33_01100 PF00271 Helicase conserved C-terminal domain HOO33_01100 PF17191 RecG wedge domain HOO33_01110 PF14602 Hexapeptide repeat of succinyl-transferase HOO33_01110 PF12804 MobA-like NTP transferase domain HOO33_01115 PF04127 DNA / pantothenate metabolism flavoprotein HOO33_01115 PF02441 Flavoprotein HOO33_01120 PF01255 Putative undecaprenyl diphosphate synthase HOO33_01135 PF01416 tRNA pseudouridine synthase HOO33_01145 PF01628 HrcA protein C terminal domain HOO33_01150 PF01025 GrpE HOO33_01155 PF00012 Hsp70 protein HOO33_01175 PF04028 Domain of unknown function (DUF374) HOO33_01180 PF01938 TRAM domain HOO33_01180 PF00919 Uncharacterized protein family UPF0004 HOO33_01180 PF04055 Radical SAM superfamily HOO33_01190 PF13184 NusA-like KH domain HOO33_01190 PF08529 NusA N-terminal domain HOO33_01195 PF09190 DALR domain HOO33_01195 PF01406 tRNA synthetases class I (C) catalytic domain HOO33_01200 PF03960 ArsC family HOO33_01205 PF02686 Glu-tRNAGln amidotransferase C subunit HOO33_01210 PF01702 Queuine tRNA-ribosyltransferase HOO33_01225 PF01225 Mur ligase family, catalytic domain HOO33_01225 PF02875 Mur ligase family, glutamate ligase domain HOO33_01225 PF08245 Mur ligase middle domain HOO33_01240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HOO33_01240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HOO33_01245 PF00773 RNB domain HOO33_01255 PF06144 DNA polymerase III, delta subunit HOO33_01260 PF01250 Ribosomal protein S6 HOO33_01265 PF00436 Single-strand binding protein family HOO33_01270 PF01084 Ribosomal protein S18 HOO33_01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO33_01280 PF03462 PCRF domain HOO33_01280 PF00472 RF-1 domain HOO33_01295 PF02660 Glycerol-3-phosphate acyltransferase HOO33_01300 PF02445 Quinolinate synthetase A protein HOO33_01305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HOO33_01305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HOO33_01320 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HOO33_01330 PF08544 GHMP kinases C terminal HOO33_01330 PF00288 GHMP kinases N terminal domain HOO33_01340 PF11987 Translation-initiation factor 2 HOO33_01340 PF00009 Elongation factor Tu GTP binding domain HOO33_01340 PF04760 Translation initiation factor IF-2, N-terminal region HOO33_01345 PF02033 Ribosome-binding factor A HOO33_01350 PF02576 RimP N-terminal domain HOO33_01355 PF01872 RibD C-terminal domain HOO33_01355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO33_01360 PF08207 Elongation factor P (EF-P) KOW-like domain HOO33_01360 PF09285 Elongation factor P, C-terminal HOO33_01360 PF01132 Elongation factor P (EF-P) OB domain HOO33_01365 PF01842 ACT domain HOO33_01365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO33_01365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO33_01370 PF00575 S1 RNA binding domain HOO33_01375 PF02401 LytB protein HOO33_01380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HOO33_01385 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HOO33_01385 PF03147 Ferredoxin-fold anticodon binding domain HOO33_01385 PF03484 tRNA synthetase B5 domain HOO33_01385 PF01588 Putative tRNA binding domain HOO33_01390 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HOO33_01390 PF01409 tRNA synthetases class II core domain (F) HOO33_01395 PF01230 HIT domain HOO33_01400 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HOO33_01405 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO33_01405 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO33_01410 PF00550 Phosphopantetheine attachment site HOO33_01430 PF06508 Queuosine biosynthesis protein QueC HOO33_01450 PF00032 Cytochrome b(C-terminal)/b6/petD HOO33_01450 PF00033 Cytochrome b/b6/petB HOO33_01460 PF00291 Pyridoxal-phosphate dependent enzyme HOO33_01465 PF00696 Amino acid kinase family HOO33_01470 PF00580 UvrD/REP helicase N-terminal domain HOO33_01470 PF12705 PD-(D/E)XK nuclease superfamily HOO33_01470 PF13361 UvrD-like helicase C-terminal domain HOO33_01480 PF00119 ATP synthase A chain HOO33_01485 PF13291 ACT domain HOO33_01485 PF00291 Pyridoxal-phosphate dependent enzyme HOO33_01490 PF01116 Fructose-bisphosphate aldolase class-II HOO33_01500 PF00072 Response regulator receiver domain HOO33_01500 PF00486 Transcriptional regulatory protein, C terminal HOO33_01510 PF01545 Cation efflux family HOO33_01510 PF16916 Dimerisation domain of Zinc Transporter HOO33_01530 PF02403 Seryl-tRNA synthetase N-terminal domain HOO33_01530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO33_01540 PF00563 EAL domain HOO33_01540 PF10442 FIST C domain HOO33_01540 PF00990 Diguanylate cyclase, GGDEF domain HOO33_01540 PF08495 FIST N domain HOO33_01560 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HOO33_01565 PF12801 4Fe-4S binding domain HOO33_01565 PF00037 4Fe-4S binding domain HOO33_01570 PF12800 4Fe-4S binding domain HOO33_01570 PF12838 4Fe-4S dicluster domain HOO33_01575 PF01568 Molydopterin dinucleotide binding domain HOO33_01575 PF00384 Molybdopterin oxidoreductase HOO33_01575 PF10518 TAT (twin-arginine translocation) pathway signal sequence HOO33_01575 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO33_01590 PF00591 Glycosyl transferase family, a/b domain HOO33_01590 PF02885 Glycosyl transferase family, helical bundle domain HOO33_01595 PF06463 Molybdenum Cofactor Synthesis C HOO33_01595 PF04055 Radical SAM superfamily HOO33_01600 PF00312 Ribosomal protein S15 HOO33_01620 PF00672 HAMP domain HOO33_01620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_01620 PF02203 Tar ligand binding domain homologue HOO33_01645 PF01575 MaoC like domain HOO33_01650 PF13193 AMP-binding enzyme C-terminal domain HOO33_01650 PF00501 AMP-binding enzyme HOO33_01670 PF02617 ATP-dependent Clp protease adaptor protein ClpS HOO33_01675 PF00004 ATPase family associated with various cellular activities (AAA) HOO33_01675 PF02861 Clp amino terminal domain, pathogenicity island component HOO33_01675 PF17871 AAA lid domain HOO33_01675 PF10431 C-terminal, D2-small domain, of ClpB protein HOO33_01675 PF07724 AAA domain (Cdc48 subfamily) HOO33_01715 PF00113 Enolase, C-terminal TIM barrel domain HOO33_01715 PF03952 Enolase, N-terminal domain HOO33_01730 PF07690 Major Facilitator Superfamily HOO33_01740 PF00164 Ribosomal protein S12/S23 HOO33_01745 PF00177 Ribosomal protein S7p/S5e HOO33_01750 PF03764 Elongation factor G, domain IV HOO33_01750 PF00009 Elongation factor Tu GTP binding domain HOO33_01750 PF03144 Elongation factor Tu domain 2 HOO33_01750 PF00679 Elongation factor G C-terminus HOO33_01750 PF14492 Elongation Factor G, domain II HOO33_01755 PF01513 ATP-NAD kinase HOO33_01760 PF13476 AAA domain HOO33_01765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_01765 PF17200 Single Cache domain 2 HOO33_01765 PF00672 HAMP domain HOO33_01770 PF01136 Peptidase family U32 HOO33_01780 PF00731 AIR carboxylase HOO33_01790 PF02091 Glycyl-tRNA synthetase alpha subunit HOO33_01795 PF01784 NIF3 (NGG1p interacting factor 3) HOO33_01805 PF02390 Putative methyltransferase HOO33_01805 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HOO33_01810 PF00849 RNA pseudouridylate synthase HOO33_01815 PF02881 SRP54-type protein, helical bundle domain HOO33_01815 PF00448 SRP54-type protein, GTPase domain HOO33_01815 PF02978 Signal peptide binding domain HOO33_01820 PF00886 Ribosomal protein S16 HOO33_01830 PF01782 RimM N-terminal domain HOO33_01845 PF00460 Flagella basal body rod protein HOO33_01845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO33_01850 PF00072 Response regulator receiver domain HOO33_01860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO33_01860 PF00460 Flagella basal body rod protein HOO33_01865 PF00460 Flagella basal body rod protein HOO33_01870 PF08345 Flagellar M-ring protein C-terminal HOO33_01870 PF01514 Secretory protein of YscJ/FliF family HOO33_01875 PF14841 FliG middle domain HOO33_01875 PF01706 FliG C-terminal domain HOO33_01875 PF14842 FliG N-terminal domain HOO33_01885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO33_01895 PF07559 Flagellar basal body protein FlaE HOO33_01895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO33_01895 PF00460 Flagella basal body rod protein HOO33_01895 PF07196 Flagellin hook IN motif HOO33_01900 PF07196 Flagellin hook IN motif HOO33_01900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO33_01900 PF07559 Flagellar basal body protein FlaE HOO33_01900 PF00460 Flagella basal body rod protein HOO33_01920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO33_01920 PF16973 Flagellar motor switch protein FliN N-terminal HOO33_01940 PF00448 SRP54-type protein, GTPase domain HOO33_01945 PF10609 NUBPL iron-transfer P-loop NTPase HOO33_01955 PF02049 Flagellar hook-basal body complex protein FliE HOO33_01960 PF00460 Flagella basal body rod protein HOO33_01960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO33_01975 PF01312 FlhB HrpN YscU SpaS Family HOO33_01985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO33_01985 PF18269 T3SS EscN ATPase C-terminal domain HOO33_01995 PF00771 FHIPEP family HOO33_02005 PF01613 Flavin reductase like domain HOO33_02015 PF02203 Tar ligand binding domain homologue HOO33_02015 PF00672 HAMP domain HOO33_02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_02020 PF02203 Tar ligand binding domain homologue HOO33_02020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_02020 PF00672 HAMP domain HOO33_02025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_02025 PF08447 PAS fold HOO33_02030 PF00672 HAMP domain HOO33_02030 PF02203 Tar ligand binding domain homologue HOO33_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_02040 PF00563 EAL domain HOO33_02040 PF00990 Diguanylate cyclase, GGDEF domain HOO33_02040 PF03707 Bacterial signalling protein N terminal repeat HOO33_02045 PF01717 Cobalamin-independent synthase, Catalytic domain HOO33_02045 PF08267 Cobalamin-independent synthase, N-terminal domain HOO33_02055 PF01746 tRNA (Guanine-1)-methyltransferase HOO33_02060 PF01245 Ribosomal protein L19 HOO33_02065 PF09335 SNARE associated Golgi protein HOO33_02070 PF00155 Aminotransferase class I and II HOO33_02075 PF12833 Helix-turn-helix domain HOO33_02085 PF01042 Endoribonuclease L-PSP HOO33_02090 PF12821 Threonine/Serine exporter, ThrE HOO33_02090 PF06738 Putative threonine/serine exporter HOO33_02095 PF06738 Putative threonine/serine exporter HOO33_02110 PF01618 MotA/TolQ/ExbB proton channel family HOO33_02115 PF02472 Biopolymer transport protein ExbD/TolR HOO33_02120 PF00171 Aldehyde dehydrogenase family HOO33_02125 PF02659 Putative manganese efflux pump HOO33_02130 PF00579 tRNA synthetases class I (W and Y) HOO33_02140 PF01594 AI-2E family transporter HOO33_02150 PF01634 ATP phosphoribosyltransferase HOO33_02155 PF03309 Type III pantothenate kinase HOO33_02180 PF05538 Campylobacter major outer membrane protein HOO33_02185 PF01202 Shikimate kinase HOO33_02190 PF00815 Histidinol dehydrogenase HOO33_02200 PF00348 Polyprenyl synthetase HOO33_02205 PF01488 Shikimate / quinate 5-dehydrogenase HOO33_02205 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HOO33_02205 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HOO33_02210 PF04073 Aminoacyl-tRNA editing domain HOO33_02210 PF03129 Anticodon binding domain HOO33_02210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO33_02215 PF00924 Mechanosensitive ion channel HOO33_02215 PF05552 Conserved TM helix HOO33_02220 PF01743 Poly A polymerase head domain HOO33_02220 PF01966 HD domain HOO33_02220 PF12627 Probable RNA and SrmB- binding site of polymerase A HOO33_02230 PF02699 Preprotein translocase subunit HOO33_02235 PF02355 Protein export membrane protein HOO33_02240 PF02355 Protein export membrane protein HOO33_02240 PF07549 SecD/SecF GG Motif HOO33_02255 PF13677 Membrane MotB of proton-channel complex MotA/MotB HOO33_02255 PF00691 OmpA family HOO33_02260 PF01618 MotA/TolQ/ExbB proton channel family HOO33_02270 PF09334 tRNA synthetases class I (M) HOO33_02270 PF13603 Leucyl-tRNA synthetase, Domain 2 HOO33_02270 PF00133 tRNA synthetases class I (I, L, M and V) HOO33_02280 PF08245 Mur ligase middle domain HOO33_02305 PF02559 CarD-like/TRCF domain HOO33_02305 PF00270 DEAD/DEAH box helicase HOO33_02305 PF00271 Helicase conserved C-terminal domain HOO33_02305 PF03461 TRCF domain HOO33_02305 PF17757 UvrB interaction domain HOO33_02315 PF01381 Helix-turn-helix HOO33_02345 PF00905 Penicillin binding protein transpeptidase domain HOO33_02345 PF00912 Transglycosylase HOO33_02350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO33_02350 PF00005 ABC transporter HOO33_02355 PF01676 Metalloenzyme superfamily HOO33_02355 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HOO33_02360 PF00953 Glycosyl transferase family 4 HOO33_02360 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HOO33_02365 PF08245 Mur ligase middle domain HOO33_02390 PF03144 Elongation factor Tu domain 2 HOO33_02390 PF00009 Elongation factor Tu GTP binding domain HOO33_02390 PF03143 Elongation factor Tu C-terminal domain HOO33_02395 PF00471 Ribosomal protein L33 HOO33_02410 PF02357 Transcription termination factor nusG HOO33_02415 PF03946 Ribosomal protein L11, N-terminal domain HOO33_02415 PF00298 Ribosomal protein L11, RNA binding domain HOO33_02420 PF00687 Ribosomal protein L1p/L10e family HOO33_02425 PF00466 Ribosomal protein L10 HOO33_02430 PF16320 Ribosomal protein L7/L12 dimerisation domain HOO33_02430 PF00542 Ribosomal protein L7/L12 C-terminal domain HOO33_02435 PF10385 RNA polymerase beta subunit external 1 domain HOO33_02435 PF04560 RNA polymerase Rpb2, domain 7 HOO33_02435 PF04561 RNA polymerase Rpb2, domain 2 HOO33_02435 PF04565 RNA polymerase Rpb2, domain 3 HOO33_02435 PF04563 RNA polymerase beta subunit HOO33_02435 PF00562 RNA polymerase Rpb2, domain 6 HOO33_02440 PF05000 RNA polymerase Rpb1, domain 4 HOO33_02440 PF04998 RNA polymerase Rpb1, domain 5 HOO33_02440 PF04997 RNA polymerase Rpb1, domain 1 HOO33_02440 PF00623 RNA polymerase Rpb1, domain 2 HOO33_02440 PF04983 RNA polymerase Rpb1, domain 3 HOO33_02460 PF00255 Glutathione peroxidase HOO33_02465 PF10518 TAT (twin-arginine translocation) pathway signal sequence HOO33_02465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HOO33_02465 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HOO33_02470 PF00374 Nickel-dependent hydrogenase HOO33_02475 PF01292 Prokaryotic cytochrome b561 HOO33_02480 PF01750 Hydrogenase maturation protease HOO33_02490 PF00708 Acylphosphatase HOO33_02490 PF17788 HypF Kae1-like domain HOO33_02490 PF01300 Telomere recombination HOO33_02490 PF07503 HypF finger HOO33_02505 PF02492 CobW/HypB/UreG, nucleotide-binding domain HOO33_02510 PF01455 HupF/HypC family HOO33_02515 PF01924 Hydrogenase formation hypA family HOO33_02520 PF17761 DUF1016 N-terminal domain HOO33_02520 PF06250 YhcG PDDEXK nuclease domain HOO33_02530 PF02769 AIR synthase related protein, C-terminal domain HOO33_02530 PF00586 AIR synthase related protein, N-terminal domain HOO33_02535 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HOO33_02545 PF01891 Cobalt uptake substrate-specific transmembrane region HOO33_02545 PF13190 PDGLE domain HOO33_02560 PF00005 ABC transporter HOO33_02565 PF00072 Response regulator receiver domain HOO33_02565 PF00486 Transcriptional regulatory protein, C terminal HOO33_02580 PF00990 Diguanylate cyclase, GGDEF domain HOO33_02580 PF00563 EAL domain HOO33_02580 PF03707 Bacterial signalling protein N terminal repeat HOO33_02590 PF00793 DAHP synthetase I family HOO33_02600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HOO33_02610 PF03631 Virulence factor BrkB HOO33_02615 PF01565 FAD binding domain HOO33_02615 PF02913 FAD linked oxidases, C-terminal domain HOO33_02625 PF00578 AhpC/TSA family HOO33_02630 PF13649 Methyltransferase domain HOO33_02635 PF06574 FAD synthetase HOO33_02635 PF01687 Riboflavin kinase HOO33_02640 PF01479 S4 domain HOO33_02640 PF01728 FtsJ-like methyltransferase HOO33_02650 PF16226 Domain of unknown function (DUF4885) HOO33_02675 PF09186 Domain of unknown function (DUF1949) HOO33_02675 PF01205 Uncharacterized protein family UPF0029 HOO33_02695 PF00459 Inositol monophosphatase family HOO33_02700 PF00037 4Fe-4S binding domain HOO33_02710 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HOO33_02730 PF00483 Nucleotidyl transferase HOO33_02735 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HOO33_02740 PF04321 RmlD substrate binding domain HOO33_02745 PF16363 GDP-mannose 4,6 dehydratase HOO33_02750 PF00535 Glycosyl transferase family 2 HOO33_02765 PF03062 MBOAT, membrane-bound O-acyltransferase family HOO33_02775 PF03062 MBOAT, membrane-bound O-acyltransferase family HOO33_02795 PF00534 Glycosyl transferases group 1 HOO33_02795 PF13439 Glycosyltransferase Family 4 HOO33_02810 PF00535 Glycosyl transferase family 2 HOO33_02815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HOO33_02830 PF13580 SIS domain HOO33_02835 PF01467 Cytidylyltransferase-like HOO33_02835 PF00294 pfkB family carbohydrate kinase HOO33_02840 PF01370 NAD dependent epimerase/dehydratase family HOO33_02855 PF00830 Ribosomal L28 family HOO33_02865 PF01960 ArgJ family HOO33_02875 PF03989 DNA gyrase C-terminal domain, beta-propeller HOO33_02875 PF00521 DNA gyrase/topoisomerase IV, subunit A HOO33_02880 PF02774 Semialdehyde dehydrogenase, dimerisation domain HOO33_02880 PF01118 Semialdehyde dehydrogenase, NAD binding domain HOO33_02890 PF01208 Uroporphyrinogen decarboxylase (URO-D) HOO33_02940 PF00005 ABC transporter HOO33_02955 PF04264 YceI-like domain HOO33_02965 PF00149 Calcineurin-like phosphoesterase HOO33_02970 PF00072 Response regulator receiver domain HOO33_02970 PF00486 Transcriptional regulatory protein, C terminal HOO33_02975 PF00672 HAMP domain HOO33_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_02975 PF00512 His Kinase A (phospho-acceptor) domain HOO33_02980 PF00005 ABC transporter HOO33_02985 PF00950 ABC 3 transport family HOO33_02990 PF17783 CvfB-like winged helix domain HOO33_02990 PF13509 S1 domain HOO33_02995 PF08534 Redoxin HOO33_03015 PF00133 tRNA synthetases class I (I, L, M and V) HOO33_03015 PF10458 Valyl tRNA synthetase tRNA binding arm HOO33_03015 PF08264 Anticodon-binding domain of tRNA HOO33_03035 PF08447 PAS fold HOO33_03035 PF13426 PAS domain HOO33_03035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_03045 PF07690 Major Facilitator Superfamily HOO33_03050 PF01725 Ham1 family HOO33_03070 PF03807 NADP oxidoreductase coenzyme F420-dependent HOO33_03070 PF14748 Pyrroline-5-carboxylate reductase dimerisation HOO33_03080 PF13525 Outer membrane lipoprotein HOO33_03085 PF00004 ATPase family associated with various cellular activities (AAA) HOO33_03085 PF05362 Lon protease (S16) C-terminal proteolytic domain HOO33_03085 PF02190 ATP-dependent protease La (LON) substrate-binding domain HOO33_03095 PF01451 Low molecular weight phosphotyrosine protein phosphatase HOO33_03115 PF02785 Biotin carboxylase C-terminal domain HOO33_03115 PF00289 Biotin carboxylase, N-terminal domain HOO33_03115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HOO33_03125 PF02657 Fe-S metabolism associated domain HOO33_03130 PF00266 Aminotransferase class-V HOO33_03140 PF00005 ABC transporter HOO33_03145 PF01458 Uncharacterized protein family (UPF0051) HOO33_03150 PF01592 NifU-like N terminal domain HOO33_03150 PF01106 NifU-like domain HOO33_03150 PF04324 BFD-like [2Fe-2S] binding domain HOO33_03160 PF07694 5TMR of 5TMR-LYT HOO33_03160 PF00990 Diguanylate cyclase, GGDEF domain HOO33_03165 PF14698 Argininosuccinate lyase C-terminal HOO33_03165 PF00206 Lyase HOO33_03170 PF00271 Helicase conserved C-terminal domain HOO33_03170 PF02151 UvrB/uvrC motif HOO33_03170 PF04851 Type III restriction enzyme, res subunit HOO33_03170 PF12344 Ultra-violet resistance protein B HOO33_03170 PF17757 UvrB interaction domain HOO33_03180 PF01272 Transcription elongation factor, GreA/GreB, C-term HOO33_03180 PF03449 Transcription elongation factor, N-terminal HOO33_03185 PF00899 ThiF family HOO33_03190 PF01584 CheW-like domain HOO33_03190 PF00072 Response regulator receiver domain HOO33_03205 PF00730 HhH-GPD superfamily base excision DNA repair protein HOO33_03205 PF00633 Helix-hairpin-helix motif HOO33_03205 PF10576 Iron-sulfur binding domain of endonuclease III HOO33_03210 PF02769 AIR synthase related protein, C-terminal domain HOO33_03210 PF00586 AIR synthase related protein, N-terminal domain HOO33_03215 PF01142 tRNA pseudouridine synthase D (TruD) HOO33_03225 PF00672 HAMP domain HOO33_03225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_03225 PF02203 Tar ligand binding domain homologue HOO33_03230 PF01330 RuvA N terminal domain HOO33_03230 PF07499 RuvA, C-terminal domain HOO33_03235 PF01820 D-ala D-ala ligase N-terminus HOO33_03235 PF07478 D-ala D-ala ligase C-terminus HOO33_03270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HOO33_03275 PF01029 NusB family HOO33_03280 PF00885 6,7-dimethyl-8-ribityllumazine synthase HOO33_03285 PF03951 Glutamine synthetase, beta-Grasp domain HOO33_03285 PF00120 Glutamine synthetase, catalytic domain HOO33_03295 PF02391 MoaE protein HOO33_03305 PF02621 Menaquinone biosynthesis HOO33_03310 PF02673 Bacitracin resistance protein BacA HOO33_03315 PF04101 Glycosyltransferase family 28 C-terminal domain HOO33_03315 PF03033 Glycosyltransferase family 28 N-terminal domain HOO33_03320 PF01098 Cell cycle protein HOO33_03325 PF00905 Penicillin binding protein transpeptidase domain HOO33_03325 PF03793 PASTA domain HOO33_03325 PF03717 Penicillin-binding Protein dimerisation domain HOO33_03330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HOO33_03335 PF03150 Di-haem cytochrome c peroxidase HOO33_03340 PF04116 Fatty acid hydroxylase superfamily HOO33_03365 PF00137 ATP synthase subunit C HOO33_03380 PF00005 ABC transporter HOO33_03385 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_03390 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO33_03395 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HOO33_03400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO33_03405 PF08447 PAS fold HOO33_03405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_03405 PF08448 PAS fold HOO33_03410 PF00072 Response regulator receiver domain HOO33_03420 PF00990 Diguanylate cyclase, GGDEF domain HOO33_03420 PF00563 EAL domain HOO33_03420 PF01590 GAF domain HOO33_03420 PF00360 Phytochrome region HOO33_03430 PF00072 Response regulator receiver domain HOO33_03430 PF00486 Transcriptional regulatory protein, C terminal HOO33_03445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_03445 PF00672 HAMP domain HOO33_03445 PF02203 Tar ligand binding domain homologue HOO33_03450 PF00158 Sigma-54 interaction domain HOO33_03450 PF00072 Response regulator receiver domain HOO33_03450 PF02954 Bacterial regulatory protein, Fis family HOO33_03455 PF13426 PAS domain HOO33_03455 PF07536 HWE histidine kinase HOO33_03455 PF13581 Histidine kinase-like ATPase domain HOO33_03460 PF13426 PAS domain HOO33_03460 PF00989 PAS fold HOO33_03460 PF00512 His Kinase A (phospho-acceptor) domain HOO33_03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_03460 PF13188 PAS domain HOO33_03465 PF13277 YmdB-like protein HOO33_03480 PF01209 ubiE/COQ5 methyltransferase family HOO33_03485 PF02601 Exonuclease VII, large subunit HOO33_03485 PF13742 OB-fold nucleic acid binding domain HOO33_03490 PF01584 CheW-like domain HOO33_03495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HOO33_03500 PF02261 Aspartate decarboxylase HOO33_03505 PF02575 YbaB/EbfC DNA-binding family HOO33_03510 PF00348 Polyprenyl synthetase HOO33_03515 PF00166 Chaperonin 10 Kd subunit HOO33_03520 PF00118 TCP-1/cpn60 chaperonin family HOO33_03525 PF00768 D-alanyl-D-alanine carboxypeptidase HOO33_03525 PF07943 Penicillin-binding protein 5, C-terminal domain HOO33_03530 PF00990 Diguanylate cyclase, GGDEF domain HOO33_03540 PF02472 Biopolymer transport protein ExbD/TolR HOO33_03545 PF01618 MotA/TolQ/ExbB proton channel family HOO33_03560 PF12704 MacB-like periplasmic core domain HOO33_03560 PF00005 ABC transporter HOO33_03560 PF02687 FtsX-like permease family HOO33_03565 PF12704 MacB-like periplasmic core domain HOO33_03565 PF00005 ABC transporter HOO33_03565 PF02687 FtsX-like permease family HOO33_03570 PF01351 Ribonuclease HII HOO33_03575 PF10431 C-terminal, D2-small domain, of ClpB protein HOO33_03575 PF02861 Clp amino terminal domain, pathogenicity island component HOO33_03575 PF17871 AAA lid domain HOO33_03575 PF00004 ATPase family associated with various cellular activities (AAA) HOO33_03575 PF07724 AAA domain (Cdc48 subfamily) HOO33_03580 PF00468 Ribosomal protein L34 HOO33_03585 PF00825 Ribonuclease P HOO33_03590 PF01809 Putative membrane protein insertion efficiency factor HOO33_03595 PF02096 60Kd inner membrane protein HOO33_03595 PF14849 YidC periplasmic domain HOO33_03605 PF12631 MnmE helical domain HOO33_03605 PF10396 GTP-binding protein TrmE N-terminus HOO33_03605 PF01926 50S ribosome-binding GTPase HOO33_03615 PF00300 Histidine phosphatase superfamily (branch 1) HOO33_03625 PF00990 Diguanylate cyclase, GGDEF domain HOO33_03625 PF17158 Membrane-associated sensor, integral membrane domain HOO33_03635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HOO33_03640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HOO33_03645 PF00425 chorismate binding enzyme HOO33_03645 PF04715 Anthranilate synthase component I, N terminal region HOO33_03655 PF00464 Serine hydroxymethyltransferase HOO33_03660 PF00152 tRNA synthetases class II (D, K and N) HOO33_03660 PF01336 OB-fold nucleic acid binding domain HOO33_03670 PF08447 PAS fold HOO33_03670 PF08448 PAS fold HOO33_03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_03680 PF04551 GcpE protein HOO33_03685 PF03796 DnaB-like helicase C terminal domain HOO33_03685 PF00772 DnaB-like helicase N terminal domain HOO33_03690 PF08334 Type II secretion system (T2SS), protein G HOO33_03690 PF07963 Prokaryotic N-terminal methylation motif HOO33_03695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO33_03705 PF00593 TonB dependent receptor HOO33_03705 PF07715 TonB-dependent Receptor Plug Domain HOO33_03725 PF13722 5TM C-terminal transporter carbon starvation CstA HOO33_03725 PF02554 Carbon starvation protein CstA HOO33_03730 PF05191 Adenylate kinase, active site lid HOO33_03745 PF00990 Diguanylate cyclase, GGDEF domain HOO33_03745 PF17158 Membrane-associated sensor, integral membrane domain HOO33_03750 PF00155 Aminotransferase class I and II HOO33_03755 PF00465 Iron-containing alcohol dehydrogenase HOO33_03760 PF02203 Tar ligand binding domain homologue HOO33_03760 PF00672 HAMP domain HOO33_03760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_03765 PF01168 Alanine racemase, N-terminal domain HOO33_03765 PF00842 Alanine racemase, C-terminal domain HOO33_03770 PF08459 UvrC Helix-hairpin-helix N-terminal HOO33_03770 PF01541 GIY-YIG catalytic domain HOO33_03770 PF02151 UvrB/uvrC motif HOO33_03775 PF02203 Tar ligand binding domain homologue HOO33_03775 PF00672 HAMP domain HOO33_03775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_03780 PF00873 AcrB/AcrD/AcrF family HOO33_03785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO33_03785 PF00529 HlyD membrane-fusion protein of T1SS HOO33_03800 PF00486 Transcriptional regulatory protein, C terminal HOO33_03800 PF00072 Response regulator receiver domain HOO33_03805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_03805 PF08447 PAS fold HOO33_03805 PF08448 PAS fold HOO33_03810 PF01641 SelR domain HOO33_03810 PF08534 Redoxin HOO33_03810 PF01625 Peptide methionine sulfoxide reductase HOO33_03815 PF00873 AcrB/AcrD/AcrF family HOO33_03820 PF00873 AcrB/AcrD/AcrF family HOO33_03825 PF00529 HlyD membrane-fusion protein of T1SS HOO33_03825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO33_03835 PF11849 Domain of unknown function (DUF3369) HOO33_03840 PF00813 FliP family HOO33_03845 PF00905 Penicillin binding protein transpeptidase domain HOO33_03845 PF03717 Penicillin-binding Protein dimerisation domain HOO33_03865 PF00005 ABC transporter HOO33_03870 PF02390 Putative methyltransferase HOO33_03880 PF01479 S4 domain HOO33_03880 PF00849 RNA pseudouridylate synthase HOO33_03885 PF01098 Cell cycle protein HOO33_03895 PF00202 Aminotransferase class-III HOO33_03900 PF06865 Pyrimidine/purine nucleoside phosphorylase HOO33_03920 PF00753 Metallo-beta-lactamase superfamily HOO33_03920 PF16123 Hydroxyacylglutathione hydrolase C-terminus HOO33_03980 PF00174 Oxidoreductase molybdopterin binding domain HOO33_03985 PF00999 Sodium/hydrogen exchanger family HOO33_03985 PF02080 TrkA-C domain HOO33_03985 PF02254 TrkA-N domain HOO33_03990 PF13361 UvrD-like helicase C-terminal domain HOO33_03990 PF00580 UvrD/REP helicase N-terminal domain HOO33_03995 PF02769 AIR synthase related protein, C-terminal domain HOO33_03995 PF00586 AIR synthase related protein, N-terminal domain HOO33_04000 PF01841 Transglutaminase-like superfamily HOO33_04020 PF00158 Sigma-54 interaction domain HOO33_04020 PF00072 Response regulator receiver domain HOO33_04025 PF08447 PAS fold HOO33_04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_04025 PF08448 PAS fold HOO33_04050 PF00384 Molybdopterin oxidoreductase HOO33_04050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO33_04050 PF12838 4Fe-4S dicluster domain HOO33_04050 PF01568 Molydopterin dinucleotide binding domain HOO33_04050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HOO33_04055 PF01568 Molydopterin dinucleotide binding domain HOO33_04055 PF00384 Molybdopterin oxidoreductase HOO33_04055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO33_04060 PF13247 4Fe-4S dicluster domain HOO33_04070 PF02634 FdhD/NarQ family HOO33_04090 PF00994 Probable molybdopterin binding domain HOO33_04090 PF03453 MoeA N-terminal region (domain I and II) HOO33_04090 PF03454 MoeA C-terminal region (domain IV) HOO33_04095 PF12849 PBP superfamily domain HOO33_04100 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_04105 PF00005 ABC transporter HOO33_04120 PF12823 Domain of unknown function (DUF3817) HOO33_04130 PF05661 Protein of unknown function (DUF808) HOO33_04135 PF01522 Polysaccharide deacetylase HOO33_04145 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HOO33_04145 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HOO33_04170 PF00270 DEAD/DEAH box helicase HOO33_04170 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HOO33_04170 PF00271 Helicase conserved C-terminal domain HOO33_04170 PF18074 Primosomal protein N C-terminal domain HOO33_04170 PF17764 3′ DNA-binding domain (3′BD) HOO33_04175 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HOO33_04175 PF14602 Hexapeptide repeat of succinyl-transferase HOO33_04180 PF18381 YcaO cyclodehydratase C-terminal domain HOO33_04180 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HOO33_04185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HOO33_04185 PF02805 Metal binding domain of Ada HOO33_04185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HOO33_04185 PF12833 Helix-turn-helix domain HOO33_04190 PF00464 Serine hydroxymethyltransferase HOO33_04205 PF00571 CBS domain HOO33_04205 PF03471 Transporter associated domain HOO33_04210 PF01594 AI-2E family transporter HOO33_04235 PF01594 AI-2E family transporter HOO33_04240 PF05496 Holliday junction DNA helicase RuvB P-loop domain HOO33_04240 PF05491 RuvB C-terminal winged helix domain HOO33_04240 PF17864 RuvB AAA lid domain HOO33_04245 PF02548 Ketopantoate hydroxymethyltransferase HOO33_04250 PF00290 Tryptophan synthase alpha chain HOO33_04255 PF04376 Arginine-tRNA-protein transferase, N terminus HOO33_04255 PF04377 Arginine-tRNA-protein transferase, C terminus HOO33_04265 PF07664 Ferrous iron transport protein B C terminus HOO33_04265 PF02421 Ferrous iron transport protein B HOO33_04265 PF07670 Nucleoside recognition HOO33_04275 PF01475 Ferric uptake regulator family HOO33_04280 PF00764 Arginosuccinate synthase HOO33_04285 PF12911 N-terminal TM domain of oligopeptide transport permease C HOO33_04285 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_04295 PF12072 Domain of unknown function (DUF3552) HOO33_04295 PF01966 HD domain HOO33_04295 PF00013 KH domain HOO33_04300 PF01812 5-formyltetrahydrofolate cyclo-ligase family HOO33_04310 PF00448 SRP54-type protein, GTPase domain HOO33_04330 PF01638 HxlR-like helix-turn-helix HOO33_04335 PF02525 Flavodoxin-like fold HOO33_04340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HOO33_04345 PF00881 Nitroreductase family HOO33_04355 PF12848 ABC transporter HOO33_04355 PF00005 ABC transporter HOO33_04360 PF12826 Helix-hairpin-helix motif HOO33_04360 PF03120 NAD-dependent DNA ligase OB-fold domain HOO33_04360 PF01653 NAD-dependent DNA ligase adenylation domain HOO33_04360 PF00533 BRCA1 C Terminus (BRCT) domain HOO33_04365 PF00672 HAMP domain HOO33_04365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_04365 PF02203 Tar ligand binding domain homologue HOO33_04370 PF02203 Tar ligand binding domain homologue HOO33_04370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_04370 PF00672 HAMP domain HOO33_04375 PF03738 Glutathionylspermidine synthase preATP-grasp HOO33_04385 PF00270 DEAD/DEAH box helicase HOO33_04385 PF00271 Helicase conserved C-terminal domain HOO33_04395 PF00005 ABC transporter HOO33_04395 PF03412 Peptidase C39 family HOO33_04395 PF00664 ABC transporter transmembrane region HOO33_04400 PF13533 Biotin-lipoyl like HOO33_04405 PF17874 MalT-like TPR region HOO33_04405 PF00196 Bacterial regulatory proteins, luxR family HOO33_04410 PF08501 Shikimate dehydrogenase substrate binding domain HOO33_04420 PF02578 Multi-copper polyphenol oxidoreductase laccase HOO33_04425 PF01842 ACT domain HOO33_04425 PF00551 Formyl transferase HOO33_04430 PF00588 SpoU rRNA Methylase family HOO33_04435 PF05525 Branched-chain amino acid transport protein HOO33_04460 PF00072 Response regulator receiver domain HOO33_04460 PF00486 Transcriptional regulatory protein, C terminal HOO33_04465 PF13426 PAS domain HOO33_04465 PF00672 HAMP domain HOO33_04465 PF00512 His Kinase A (phospho-acceptor) domain HOO33_04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_04530 PF01555 DNA methylase HOO33_04535 PF01555 DNA methylase HOO33_04550 PF00132 Bacterial transferase hexapeptide (six repeats) HOO33_04555 PF00550 Phosphopantetheine attachment site HOO33_04570 PF03062 MBOAT, membrane-bound O-acyltransferase family HOO33_04575 PF00501 AMP-binding enzyme HOO33_04575 PF13193 AMP-binding enzyme C-terminal domain HOO33_04590 PF00795 Carbon-nitrogen hydrolase HOO33_04595 PF01979 Amidohydrolase family HOO33_04620 PF00171 Aldehyde dehydrogenase family HOO33_04625 PF08543 Phosphomethylpyrimidine kinase HOO33_04625 PF02581 Thiamine monophosphate synthase HOO33_04645 PF13419 Haloacid dehalogenase-like hydrolase HOO33_04650 PF03641 Possible lysine decarboxylase HOO33_04670 PF01709 Transcriptional regulator HOO33_04675 PF00664 ABC transporter transmembrane region HOO33_04675 PF00005 ABC transporter HOO33_04685 PF00072 Response regulator receiver domain HOO33_04685 PF00486 Transcriptional regulatory protein, C terminal HOO33_04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_04700 PF08447 PAS fold HOO33_04700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_04705 PF00672 HAMP domain HOO33_04705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_04705 PF02203 Tar ligand binding domain homologue HOO33_04710 PF01168 Alanine racemase, N-terminal domain HOO33_04715 PF17820 PDZ domain HOO33_04715 PF02163 Peptidase family M50 HOO33_04720 PF01066 CDP-alcohol phosphatidyltransferase HOO33_04730 PF00701 Dihydrodipicolinate synthetase family HOO33_04735 PF00675 Insulinase (Peptidase family M16) HOO33_04735 PF05193 Peptidase M16 inactive domain HOO33_04740 PF01180 Dihydroorotate dehydrogenase HOO33_04745 PF00664 ABC transporter transmembrane region HOO33_04745 PF00005 ABC transporter HOO33_04750 PF03023 Lipid II flippase MurJ HOO33_04760 PF01475 Ferric uptake regulator family HOO33_04765 PF02130 Uncharacterized protein family UPF0054 HOO33_04775 PF18073 Rubredoxin metal binding domain HOO33_04780 PF00476 DNA polymerase family A HOO33_04780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HOO33_04780 PF01367 5'-3' exonuclease, C-terminal SAM fold HOO33_04785 PF01699 Sodium/calcium exchanger protein HOO33_04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_04805 PF13492 GAF domain HOO33_04805 PF07694 5TMR of 5TMR-LYT HOO33_04805 PF06580 Histidine kinase HOO33_04810 PF04397 LytTr DNA-binding domain HOO33_04810 PF00072 Response regulator receiver domain HOO33_04815 PF12792 CSS motif domain associated with EAL HOO33_04815 PF00563 EAL domain HOO33_04825 PF03109 ABC1 family HOO33_04840 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HOO33_04850 PF00762 Ferrochelatase HOO33_04855 PF08212 Lipocalin-like domain HOO33_04865 PF08338 Domain of unknown function (DUF1731) HOO33_04865 PF01370 NAD dependent epimerase/dehydratase family HOO33_04870 PF03441 FAD binding domain of DNA photolyase HOO33_04870 PF00875 DNA photolyase HOO33_04875 PF01118 Semialdehyde dehydrogenase, NAD binding domain HOO33_04880 PF17760 UvrA interaction domain HOO33_04880 PF17755 UvrA DNA-binding domain HOO33_04880 PF00005 ABC transporter HOO33_04885 PF00563 EAL domain HOO33_04885 PF08448 PAS fold HOO33_04885 PF00990 Diguanylate cyclase, GGDEF domain HOO33_04900 PF00561 alpha/beta hydrolase fold HOO33_04915 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HOO33_04925 PF02540 NAD synthase HOO33_04925 PF00117 Glutamine amidotransferase class-I HOO33_04925 PF00958 GMP synthase C terminal domain HOO33_04930 PF02910 Fumarate reductase flavoprotein C-term HOO33_04930 PF00890 FAD binding domain HOO33_04940 PF01863 Protein of unknown function DUF45 HOO33_04945 PF00155 Aminotransferase class I and II HOO33_04950 PF01966 HD domain HOO33_04950 PF00072 Response regulator receiver domain HOO33_04955 PF00211 Adenylate and Guanylate cyclase catalytic domain HOO33_04980 PF00999 Sodium/hydrogen exchanger family HOO33_04980 PF02254 TrkA-N domain HOO33_04980 PF02080 TrkA-C domain HOO33_04990 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO33_04990 PF00512 His Kinase A (phospho-acceptor) domain HOO33_04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_05000 PF02600 Disulfide bond formation protein DsbB HOO33_05015 PF08534 Redoxin HOO33_05025 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HOO33_05030 PF01479 S4 domain HOO33_05030 PF00849 RNA pseudouridylate synthase HOO33_05035 PF13419 Haloacid dehalogenase-like hydrolase HOO33_05055 PF00593 TonB dependent receptor HOO33_05055 PF07715 TonB-dependent Receptor Plug Domain HOO33_05060 PF01497 Periplasmic binding protein HOO33_05070 PF01032 FecCD transport family HOO33_05090 PF01761 3-dehydroquinate synthase HOO33_05100 PF00919 Uncharacterized protein family UPF0004 HOO33_05100 PF04055 Radical SAM superfamily HOO33_05105 PF00004 ATPase family associated with various cellular activities (AAA) HOO33_05105 PF06480 FtsH Extracellular HOO33_05105 PF17862 AAA+ lid domain HOO33_05105 PF01434 Peptidase family M41 HOO33_05115 PF00994 Probable molybdopterin binding domain HOO33_05120 PF12704 MacB-like periplasmic core domain HOO33_05120 PF02687 FtsX-like permease family HOO33_05125 PF00271 Helicase conserved C-terminal domain HOO33_05125 PF02810 SEC-C motif HOO33_05125 PF07517 SecA DEAD-like domain HOO33_05125 PF01043 SecA preprotein cross-linking domain HOO33_05125 PF07516 SecA Wing and Scaffold domain HOO33_05130 PF03548 Outer membrane lipoprotein carrier protein LolA HOO33_05140 PF07730 Histidine kinase HOO33_05140 PF17200 Single Cache domain 2 HOO33_05145 PF01546 Peptidase family M20/M25/M40 HOO33_05145 PF07687 Peptidase dimerisation domain HOO33_05150 PF05140 ResB-like family HOO33_05150 PF01578 Cytochrome C assembly protein HOO33_05160 PF00072 Response regulator receiver domain HOO33_05160 PF00990 Diguanylate cyclase, GGDEF domain HOO33_05165 PF08003 Protein of unknown function (DUF1698) HOO33_05170 PF01590 GAF domain HOO33_05170 PF00563 EAL domain HOO33_05170 PF00990 Diguanylate cyclase, GGDEF domain HOO33_05170 PF00360 Phytochrome region HOO33_05180 PF00753 Metallo-beta-lactamase superfamily HOO33_05205 PF01556 DnaJ C terminal domain HOO33_05205 PF00684 DnaJ central domain HOO33_05205 PF00226 DnaJ domain HOO33_05210 PF18644 Phage integrase SAM-like domain HOO33_05210 PF00589 Phage integrase family HOO33_05215 PF00072 Response regulator receiver domain HOO33_05215 PF01339 CheB methylesterase HOO33_05220 PF03975 CheD chemotactic sensory transduction HOO33_05225 PF03705 CheR methyltransferase, all-alpha domain HOO33_05225 PF01739 CheR methyltransferase, SAM binding domain HOO33_05230 PF01627 Hpt domain HOO33_05230 PF01584 CheW-like domain HOO33_05230 PF09078 CheY binding HOO33_05230 PF02895 Signal transducing histidine kinase, homodimeric domain HOO33_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_05235 PF00072 Response regulator receiver domain HOO33_05240 PF03725 3' exoribonuclease family, domain 2 HOO33_05240 PF00013 KH domain HOO33_05240 PF00575 S1 RNA binding domain HOO33_05240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HOO33_05240 PF01138 3' exoribonuclease family, domain 1 HOO33_05250 PF04453 LPS transport system D HOO33_05250 PF03968 OstA-like protein HOO33_05260 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HOO33_05260 PF02843 Phosphoribosylglycinamide synthetase, C domain HOO33_05260 PF02844 Phosphoribosylglycinamide synthetase, N domain HOO33_05270 PF01740 STAS domain HOO33_05270 PF00916 Sulfate permease family HOO33_05275 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HOO33_05275 PF01926 50S ribosome-binding GTPase HOO33_05280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HOO33_05280 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HOO33_05295 PF09397 Ftsk gamma domain HOO33_05295 PF01580 FtsK/SpoIIIE family HOO33_05295 PF17854 FtsK alpha domain HOO33_05300 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HOO33_05300 PF00132 Bacterial transferase hexapeptide (six repeats) HOO33_05305 PF10369 Small subunit of acetolactate synthase HOO33_05310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO33_05310 PF00205 Thiamine pyrophosphate enzyme, central domain HOO33_05310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO33_05320 PF02541 Ppx/GppA phosphatase family HOO33_05325 PF01066 CDP-alcohol phosphatidyltransferase HOO33_05345 PF01171 PP-loop family HOO33_05355 PF03453 MoeA N-terminal region (domain I and II) HOO33_05355 PF00994 Probable molybdopterin binding domain HOO33_05355 PF03454 MoeA C-terminal region (domain IV) HOO33_05365 PF04228 Putative neutral zinc metallopeptidase HOO33_05370 PF02646 RmuC family HOO33_05375 PF16491 CAAX prenyl protease N-terminal, five membrane helices HOO33_05375 PF01435 Peptidase family M48 HOO33_05380 PF13091 PLD-like domain HOO33_05385 PF03061 Thioesterase superfamily HOO33_05400 PF01432 Peptidase family M3 HOO33_05405 PF05175 Methyltransferase small domain HOO33_05405 PF17827 PrmC N-terminal domain HOO33_05410 PF06969 HemN C-terminal domain HOO33_05410 PF04055 Radical SAM superfamily HOO33_05415 PF00293 NUDIX domain HOO33_05420 PF00696 Amino acid kinase family HOO33_05420 PF01842 ACT domain HOO33_05420 PF13840 ACT domain HOO33_05435 PF00809 Pterin binding enzyme HOO33_05450 PF03477 ATP cone domain HOO33_05450 PF02867 Ribonucleotide reductase, barrel domain HOO33_05450 PF00317 Ribonucleotide reductase, all-alpha domain HOO33_05490 PF12282 Signal transduction histidine kinase HOO33_05490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_05490 PF07568 Histidine kinase HOO33_05510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HOO33_05510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HOO33_05515 PF04055 Radical SAM superfamily HOO33_05515 PF06969 HemN C-terminal domain HOO33_05525 PF03594 Benzoate membrane transport protein HOO33_05535 PF00202 Aminotransferase class-III HOO33_05540 PF03473 MOSC domain HOO33_05545 PF01113 Dihydrodipicolinate reductase, N-terminus HOO33_05545 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain HOO33_05550 PF00005 ABC transporter HOO33_05560 PF00571 CBS domain HOO33_05560 PF03471 Transporter associated domain HOO33_05560 PF01595 Cyclin M transmembrane N-terminal domain HOO33_05565 PF00488 MutS domain V HOO33_05565 PF01713 Smr domain HOO33_05580 PF02618 YceG-like family HOO33_05585 PF03971 Monomeric isocitrate dehydrogenase HOO33_05590 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HOO33_05590 PF00056 lactate/malate dehydrogenase, NAD binding domain HOO33_05615 PF01795 MraW methylase family HOO33_05625 PF00216 Bacterial DNA-binding protein HOO33_05645 PF00072 Response regulator receiver domain HOO33_05655 PF08447 PAS fold HOO33_05655 PF00989 PAS fold HOO33_05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_05655 PF00512 His Kinase A (phospho-acceptor) domain HOO33_05660 PF01556 DnaJ C terminal domain HOO33_05660 PF00226 DnaJ domain HOO33_05665 PF13411 MerR HTH family regulatory protein HOO33_05670 PF03741 Integral membrane protein TerC family HOO33_05675 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HOO33_05680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO33_05685 PF02540 NAD synthase HOO33_05700 PF00226 DnaJ domain HOO33_05700 PF05099 Tellurite resistance protein TerB HOO33_05705 PF13307 Helicase C-terminal domain HOO33_05705 PF00929 Exonuclease HOO33_05710 PF02547 Queuosine biosynthesis protein HOO33_05715 PF00902 Sec-independent protein translocase protein (TatC) HOO33_05720 PF02416 mttA/Hcf106 family HOO33_05725 PF00248 Aldo/keto reductase family HOO33_05745 PF02132 RecR protein HOO33_05745 PF13662 Toprim domain HOO33_05750 PF00005 ABC transporter HOO33_05750 PF16326 ABC transporter C-terminal domain HOO33_05750 PF12848 ABC transporter HOO33_05755 PF09424 Yqey-like protein HOO33_05760 PF01551 Peptidase family M23 HOO33_05760 PF04225 Opacity-associated protein A LysM-like domain HOO33_05770 PF00990 Diguanylate cyclase, GGDEF domain HOO33_05775 PF01361 Tautomerase enzyme HOO33_05785 PF00218 Indole-3-glycerol phosphate synthase HOO33_05795 PF03692 Putative zinc- or iron-chelating domain HOO33_05800 PF05175 Methyltransferase small domain HOO33_05810 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HOO33_05810 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HOO33_05810 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HOO33_05815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO33_05825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO33_05825 PF14480 DNA polymerase III polC-type N-terminus I HOO33_05825 PF11490 DNA polymerase III polC-type N-terminus II HOO33_05825 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO33_05825 PF00929 Exonuclease HOO33_05825 PF14579 Helix-hairpin-helix motif HOO33_05825 PF02811 PHP domain HOO33_05830 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HOO33_05835 PF00834 Ribulose-phosphate 3 epimerase family HOO33_05840 PF02253 Phospholipase A1 HOO33_05845 PF03841 L-seryl-tRNA selenium transferase HOO33_05850 PF09107 Elongation factor SelB, winged helix HOO33_05850 PF09106 Elongation factor SelB, winged helix HOO33_05850 PF09105 Elongation factor SelB, winged helix HOO33_05850 PF03144 Elongation factor Tu domain 2 HOO33_05850 PF00009 Elongation factor Tu GTP binding domain HOO33_05855 PF00384 Molybdopterin oxidoreductase HOO33_05855 PF18364 Molybdopterin oxidoreductase N-terminal domain HOO33_05855 PF01568 Molydopterin dinucleotide binding domain HOO33_05870 PF02153 Prephenate dehydrogenase HOO33_05870 PF01842 ACT domain HOO33_05875 PF07244 Surface antigen variable number repeat HOO33_05875 PF01103 Surface antigen HOO33_05880 PF04055 Radical SAM superfamily HOO33_05890 PF00749 tRNA synthetases class I (E and Q), catalytic domain HOO33_05920 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HOO33_05930 PF09334 tRNA synthetases class I (M) HOO33_05930 PF01588 Putative tRNA binding domain HOO33_05930 PF00133 tRNA synthetases class I (I, L, M and V) HOO33_05945 PF01293 Phosphoenolpyruvate carboxykinase HOO33_05955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HOO33_05955 PF00925 GTP cyclohydrolase II HOO33_05985 PF00293 NUDIX domain HOO33_05990 PF04461 Protein of unknown function (DUF520) HOO33_05995 PF04241 Protein of unknown function (DUF423) HOO33_06000 PF00156 Phosphoribosyl transferase domain HOO33_06005 PF06434 Aconitate hydratase 2 N-terminus HOO33_06005 PF00330 Aconitase family (aconitate hydratase) HOO33_06005 PF11791 Aconitate B N-terminal domain HOO33_06015 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO33_06025 PF00072 Response regulator receiver domain HOO33_06025 PF00486 Transcriptional regulatory protein, C terminal HOO33_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_06035 PF00893 Small Multidrug Resistance protein HOO33_06060 PF00990 Diguanylate cyclase, GGDEF domain HOO33_06060 PF00072 Response regulator receiver domain HOO33_06080 PF01790 Prolipoprotein diacylglyceryl transferase HOO33_06085 PF09411 Lipid A 3-O-deacylase (PagL) HOO33_06095 PF01339 CheB methylesterase HOO33_06095 PF00072 Response regulator receiver domain HOO33_06105 PF02348 Cytidylyltransferase HOO33_06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_06110 PF00072 Response regulator receiver domain HOO33_06130 PF00005 ABC transporter HOO33_06130 PF12399 Branched-chain amino acid ATP-binding cassette transporter HOO33_06135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HOO33_06140 PF02885 Glycosyl transferase family, helical bundle domain HOO33_06140 PF00591 Glycosyl transferase family, a/b domain HOO33_06150 PF00106 short chain dehydrogenase HOO33_06160 PF00933 Glycosyl hydrolase family 3 N terminal domain HOO33_06165 PF00684 DnaJ central domain HOO33_06165 PF01556 DnaJ C terminal domain HOO33_06165 PF00226 DnaJ domain HOO33_06170 PF00226 DnaJ domain HOO33_06170 PF01556 DnaJ C terminal domain HOO33_06170 PF00684 DnaJ central domain HOO33_06180 PF02203 Tar ligand binding domain homologue HOO33_06180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_06180 PF00672 HAMP domain HOO33_06185 PF03061 Thioesterase superfamily HOO33_06190 PF00478 IMP dehydrogenase / GMP reductase domain HOO33_06190 PF00571 CBS domain HOO33_06195 PF01425 Amidase HOO33_06200 PF01196 Ribosomal protein L17 HOO33_06205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HOO33_06205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HOO33_06205 PF01000 RNA polymerase Rpb3/RpoA insert domain HOO33_06210 PF00163 Ribosomal protein S4/S9 N-terminal domain HOO33_06210 PF01479 S4 domain HOO33_06215 PF00411 Ribosomal protein S11 HOO33_06220 PF00416 Ribosomal protein S13/S18 HOO33_06225 PF00444 Ribosomal protein L36 HOO33_06240 PF00180 Isocitrate/isopropylmalate dehydrogenase HOO33_06245 PF00694 Aconitase C-terminal domain HOO33_06250 PF04539 Sigma-70 region 3 HOO33_06250 PF04545 Sigma-70, region 4 HOO33_06250 PF00140 Sigma-70 factor, region 1.2 HOO33_06250 PF04542 Sigma-70 region 2 HOO33_06255 PF02092 Glycyl-tRNA synthetase beta subunit HOO33_06275 PF02527 rRNA small subunit methyltransferase G HOO33_06280 PF00925 GTP cyclohydrolase II HOO33_06285 PF00490 Delta-aminolevulinic acid dehydratase HOO33_06315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HOO33_06315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HOO33_06315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HOO33_06315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HOO33_06320 PF00483 Nucleotidyl transferase HOO33_06325 PF00342 Phosphoglucose isomerase HOO33_06340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HOO33_06350 PF02719 Polysaccharide biosynthesis protein HOO33_06355 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HOO33_06365 PF00953 Glycosyl transferase family 4 HOO33_06370 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HOO33_06400 PF00977 Histidine biosynthesis protein HOO33_06405 PF00117 Glutamine amidotransferase class-I HOO33_06440 PF00501 AMP-binding enzyme HOO33_06440 PF13193 AMP-binding enzyme C-terminal domain HOO33_06445 PF01209 ubiE/COQ5 methyltransferase family HOO33_06465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO33_06475 PF08241 Methyltransferase domain HOO33_06485 PF13537 Glutamine amidotransferase domain HOO33_06485 PF00733 Asparagine synthase HOO33_06490 PF12697 Alpha/beta hydrolase family HOO33_06490 PF08241 Methyltransferase domain HOO33_06495 PF00535 Glycosyl transferase family 2 HOO33_06500 PF02350 UDP-N-acetylglucosamine 2-epimerase HOO33_06505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO33_06510 PF00132 Bacterial transferase hexapeptide (six repeats) HOO33_06520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HOO33_06520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HOO33_06525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HOO33_06525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HOO33_06525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HOO33_06550 PF12728 Helix-turn-helix domain HOO33_06550 PF02661 Fic/DOC family HOO33_06565 PF02142 MGS-like domain HOO33_06565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HOO33_06565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HOO33_06575 PF00561 alpha/beta hydrolase fold HOO33_06585 PF04143 Sulphur transport HOO33_06590 PF00091 Tubulin/FtsZ family, GTPase domain HOO33_06590 PF12327 FtsZ family, C-terminal domain HOO33_06595 PF02491 SHS2 domain inserted in FTSA HOO33_06605 PF13538 UvrD-like helicase C-terminal domain HOO33_06605 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HOO33_06605 PF14490 Helix-hairpin-helix containing domain HOO33_06615 PF11798 IMS family HHH motif HOO33_06615 PF11799 impB/mucB/samB family C-terminal domain HOO33_06615 PF00817 impB/mucB/samB family HOO33_06625 PF10518 TAT (twin-arginine translocation) pathway signal sequence HOO33_06625 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO33_06625 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding HOO33_06630 PF16326 ABC transporter C-terminal domain HOO33_06630 PF12848 ABC transporter HOO33_06630 PF00005 ABC transporter HOO33_06660 PF04055 Radical SAM superfamily HOO33_06665 PF03099 Biotin/lipoate A/B protein ligase family HOO33_06665 PF10437 Bacterial lipoate protein ligase C-terminus HOO33_06670 PF17831 Pyruvate dehydrogenase E1 component middle domain HOO33_06670 PF00456 Transketolase, thiamine diphosphate binding domain HOO33_06675 PF00364 Biotin-requiring enzyme HOO33_06675 PF02817 e3 binding domain HOO33_06675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HOO33_06680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HOO33_06680 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO33_06690 PF00403 Heavy-metal-associated domain HOO33_06695 PF00270 DEAD/DEAH box helicase HOO33_06695 PF00271 Helicase conserved C-terminal domain HOO33_06710 PF00672 HAMP domain HOO33_06710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_06710 PF02203 Tar ligand binding domain homologue HOO33_06715 PF00075 RNase H HOO33_06720 PF00682 HMGL-like HOO33_06730 PF01312 FlhB HrpN YscU SpaS Family HOO33_06740 PF00583 Acetyltransferase (GNAT) family HOO33_06745 PF01926 50S ribosome-binding GTPase HOO33_06765 PF00475 Imidazoleglycerol-phosphate dehydratase HOO33_06770 PF05036 Sporulation related domain HOO33_06770 PF03330 Lytic transglycolase HOO33_06780 PF01026 TatD related DNase HOO33_06790 PF10431 C-terminal, D2-small domain, of ClpB protein HOO33_06790 PF07724 AAA domain (Cdc48 subfamily) HOO33_06795 PF00227 Proteasome subunit HOO33_06800 PF03948 Ribosomal protein L9, C-terminal domain HOO33_06800 PF01281 Ribosomal protein L9, N-terminal domain HOO33_06810 PF02441 Flavoprotein HOO33_06815 PF01467 Cytidylyltransferase-like HOO33_06820 PF02223 Thymidylate kinase HOO33_06825 PF13393 Histidyl-tRNA synthetase HOO33_06825 PF03129 Anticodon binding domain HOO33_06830 PF17810 Arginine decarboxylase helical bundle domain HOO33_06830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HOO33_06830 PF17944 Arginine decarboxylase C-terminal helical extension HOO33_06835 PF06426 Serine acetyltransferase, N-terminal HOO33_06835 PF00132 Bacterial transferase hexapeptide (six repeats) HOO33_06840 PF01925 Sulfite exporter TauE/SafE HOO33_06855 PF06865 Pyrimidine/purine nucleoside phosphorylase HOO33_06870 PF08668 HDOD domain HOO33_06875 PF01926 50S ribosome-binding GTPase HOO33_06875 PF06071 Protein of unknown function (DUF933) HOO33_06890 PF00085 Thioredoxin HOO33_06895 PF00578 AhpC/TSA family HOO33_06895 PF10417 C-terminal domain of 1-Cys peroxiredoxin HOO33_06900 PF00672 HAMP domain HOO33_06900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_06900 PF02203 Tar ligand binding domain homologue HOO33_06905 PF00672 HAMP domain HOO33_06905 PF00072 Response regulator receiver domain HOO33_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_06905 PF01627 Hpt domain HOO33_06905 PF00512 His Kinase A (phospho-acceptor) domain HOO33_06905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO33_06910 PF00072 Response regulator receiver domain HOO33_06915 PF00990 Diguanylate cyclase, GGDEF domain HOO33_06915 PF08448 PAS fold HOO33_06920 PF00672 HAMP domain HOO33_06920 PF00072 Response regulator receiver domain HOO33_06920 PF00512 His Kinase A (phospho-acceptor) domain HOO33_06920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO33_06920 PF01627 Hpt domain HOO33_06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_06935 PF08497 Radical SAM N-terminal HOO33_06935 PF04055 Radical SAM superfamily HOO33_06945 PF00152 tRNA synthetases class II (D, K and N) HOO33_06945 PF02938 GAD domain HOO33_06945 PF01336 OB-fold nucleic acid binding domain HOO33_06955 PF03167 Uracil DNA glycosylase superfamily HOO33_06960 PF01176 Translation initiation factor 1A / IF-1 HOO33_06965 PF00557 Metallopeptidase family M24 HOO33_06970 PF00344 SecY translocase HOO33_06975 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HOO33_06980 PF03719 Ribosomal protein S5, C-terminal domain HOO33_06980 PF00333 Ribosomal protein S5, N-terminal domain HOO33_06985 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HOO33_06990 PF00347 Ribosomal protein L6 HOO33_06995 PF00410 Ribosomal protein S8 HOO33_07000 PF00253 Ribosomal protein S14p/S29e HOO33_07005 PF00673 ribosomal L5P family C-terminus HOO33_07005 PF00281 Ribosomal protein L5 HOO33_07010 PF00467 KOW motif HOO33_07010 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HOO33_07015 PF00238 Ribosomal protein L14p/L23e HOO33_07020 PF00366 Ribosomal protein S17 HOO33_07025 PF00831 Ribosomal L29 protein HOO33_07030 PF00252 Ribosomal protein L16p/L10e HOO33_07035 PF07650 KH domain HOO33_07035 PF00189 Ribosomal protein S3, C-terminal domain HOO33_07040 PF00237 Ribosomal protein L22p/L17e HOO33_07045 PF00203 Ribosomal protein S19 HOO33_07050 PF03947 Ribosomal Proteins L2, C-terminal domain HOO33_07050 PF00181 Ribosomal Proteins L2, RNA binding domain HOO33_07055 PF00276 Ribosomal protein L23 HOO33_07060 PF00573 Ribosomal protein L4/L1 family HOO33_07065 PF00297 Ribosomal protein L3 HOO33_07070 PF00338 Ribosomal protein S10p/S20e HOO33_07090 PF03372 Endonuclease/Exonuclease/phosphatase family HOO33_07095 PF02568 Thiamine biosynthesis protein (ThiI) HOO33_07095 PF02926 THUMP domain HOO33_07115 PF01078 Magnesium chelatase, subunit ChlI HOO33_07115 PF13335 Magnesium chelatase, subunit ChlI C-terminal HOO33_07120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_07120 PF02203 Tar ligand binding domain homologue HOO33_07120 PF00672 HAMP domain HOO33_07125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_07125 PF08447 PAS fold HOO33_07135 PF01327 Polypeptide deformylase HOO33_07140 PF00574 Clp protease HOO33_07145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO33_07145 PF05698 Bacterial trigger factor protein (TF) C-terminus HOO33_07145 PF05697 Bacterial trigger factor protein (TF) HOO33_07150 PF03976 Polyphosphate kinase 2 (PPK2) HOO33_07155 PF03976 Polyphosphate kinase 2 (PPK2) HOO33_07160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HOO33_07165 PF03435 Saccharopine dehydrogenase NADP binding domain HOO33_07165 PF16653 Saccharopine dehydrogenase C-terminal domain HOO33_07225 PF02698 DUF218 domain HOO33_07230 PF01875 Memo-like protein HOO33_07245 PF00034 Cytochrome c HOO33_07250 PF00115 Cytochrome C and Quinol oxidase polypeptide I HOO33_07260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO33_07265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO33_07280 PF13186 Iron-sulfur cluster-binding domain HOO33_07280 PF04055 Radical SAM superfamily HOO33_07290 PF10414 Sirohaem synthase dimerisation region HOO33_07290 PF14824 Sirohaem biosynthesis protein central HOO33_07290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO33_07300 PF14824 Sirohaem biosynthesis protein central HOO33_07300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO33_07300 PF10414 Sirohaem synthase dimerisation region HOO33_07305 PF17805 AsnC-like ligand binding domain HOO33_07320 PF00762 Ferrochelatase HOO33_07325 PF00005 ABC transporter HOO33_07335 PF00313 'Cold-shock' DNA-binding domain HOO33_07340 PF00149 Calcineurin-like phosphoesterase HOO33_07350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HOO33_07350 PF02770 Acyl-CoA dehydrogenase, middle domain HOO33_07350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HOO33_07375 PF00403 Heavy-metal-associated domain HOO33_07380 PF10442 FIST C domain HOO33_07380 PF00563 EAL domain HOO33_07380 PF08495 FIST N domain HOO33_07380 PF00990 Diguanylate cyclase, GGDEF domain HOO33_07385 PF00625 Guanylate kinase HOO33_07395 PF00005 ABC transporter HOO33_07400 PF00889 Elongation factor TS HOO33_07405 PF00318 Ribosomal protein S2 HOO33_07410 PF08245 Mur ligase middle domain HOO33_07410 PF02875 Mur ligase family, glutamate ligase domain HOO33_07425 PF08264 Anticodon-binding domain of tRNA HOO33_07425 PF00133 tRNA synthetases class I (I, L, M and V) HOO33_07430 PF06039 Malate:quinone oxidoreductase (Mqo) HOO33_07435 PF18146 Damage-inducible protein CinA KH domain HOO33_07435 PF02464 Competence-damaged protein HOO33_07435 PF00994 Probable molybdopterin binding domain HOO33_07480 PF00512 His Kinase A (phospho-acceptor) domain HOO33_07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_07485 PF00072 Response regulator receiver domain HOO33_07485 PF00486 Transcriptional regulatory protein, C terminal HOO33_07495 PF00474 Sodium:solute symporter family HOO33_07505 PF00929 Exonuclease HOO33_07505 PF02811 PHP domain HOO33_07505 PF11490 DNA polymerase III polC-type N-terminus II HOO33_07505 PF14579 Helix-hairpin-helix motif HOO33_07505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO33_07505 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO33_07515 PF00474 Sodium:solute symporter family HOO33_07525 PF00474 Sodium:solute symporter family HOO33_07535 PF00929 Exonuclease HOO33_07535 PF02811 PHP domain HOO33_07535 PF14579 Helix-hairpin-helix motif HOO33_07535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO33_07535 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO33_07545 PF00871 Acetokinase family HOO33_07550 PF01515 Phosphate acetyl/butaryl transferase HOO33_07555 PF00871 Acetokinase family HOO33_07560 PF01343 Peptidase family S49 HOO33_07565 PF01979 Amidohydrolase family HOO33_07570 PF01220 Dehydroquinase class II HOO33_07575 PF01321 Creatinase/Prolidase N-terminal domain HOO33_07575 PF00557 Metallopeptidase family M24 HOO33_07580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HOO33_07595 PF01695 IstB-like ATP binding protein HOO33_07600 PF00665 Integrase core domain HOO33_07615 PF14572 Phosphoribosyl synthetase-associated domain HOO33_07615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HOO33_07620 PF00691 OmpA family HOO33_07620 PF05736 OprF membrane domain HOO33_07625 PF00009 Elongation factor Tu GTP binding domain HOO33_07625 PF03144 Elongation factor Tu domain 2 HOO33_07625 PF06421 GTP-binding protein LepA C-terminus HOO33_07625 PF00679 Elongation factor G C-terminus HOO33_07630 PF00156 Phosphoribosyl transferase domain HOO33_07635 PF00117 Glutamine amidotransferase class-I HOO33_07640 PF00977 Histidine biosynthesis protein HOO33_07645 PF00990 Diguanylate cyclase, GGDEF domain HOO33_07645 PF00072 Response regulator receiver domain HOO33_07655 PF01914 MarC family integral membrane protein HOO33_07660 PF00488 MutS domain V HOO33_07660 PF05192 MutS domain III HOO33_07660 PF05188 MutS domain II HOO33_07660 PF01624 MutS domain I HOO33_07660 PF05190 MutS family domain IV HOO33_07675 PF00682 HMGL-like HOO33_07675 PF08502 LeuA allosteric (dimerisation) domain HOO33_07680 PF01434 Peptidase family M41 HOO33_07680 PF17862 AAA+ lid domain HOO33_07680 PF00004 ATPase family associated with various cellular activities (AAA) HOO33_07690 PF01207 Dihydrouridine synthase (Dus) HOO33_07700 PF02590 Predicted SPOUT methyltransferase HOO33_07705 PF02581 Thiamine monophosphate synthase HOO33_07710 PF17848 Acetyl-coA carboxylase zinc finger domain HOO33_07710 PF01039 Carboxyl transferase domain HOO33_07715 PF02773 S-adenosylmethionine synthetase, C-terminal domain HOO33_07715 PF02772 S-adenosylmethionine synthetase, central domain HOO33_07715 PF00438 S-adenosylmethionine synthetase, N-terminal domain HOO33_07720 PF01380 SIS domain HOO33_07725 PF00459 Inositol monophosphatase family HOO33_07735 PF00672 HAMP domain HOO33_07735 PF02203 Tar ligand binding domain homologue HOO33_07735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_07775 PF00883 Cytosol aminopeptidase family, catalytic domain HOO33_07775 PF02789 Cytosol aminopeptidase family, N-terminal domain HOO33_07785 PF00291 Pyridoxal-phosphate dependent enzyme HOO33_07790 PF00156 Phosphoribosyl transferase domain HOO33_07795 PF01068 ATP dependent DNA ligase domain HOO33_07795 PF14743 DNA ligase OB-like domain HOO33_07805 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO33_07810 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO33_07835 PF06965 Na+/H+ antiporter 1 HOO33_07875 PF00696 Amino acid kinase family HOO33_07880 PF01192 RNA polymerase Rpb6 HOO33_07885 PF02824 TGS domain HOO33_07885 PF04607 Region found in RelA / SpoT proteins HOO33_07885 PF13291 ACT domain HOO33_07890 PF00579 tRNA synthetases class I (W and Y) HOO33_07890 PF01479 S4 domain HOO33_07900 PF01520 N-acetylmuramoyl-L-alanine amidase HOO33_07915 PF01195 Peptidyl-tRNA hydrolase HOO33_07920 PF01386 Ribosomal L25p family HOO33_07920 PF14693 Ribosomal protein TL5, C-terminal domain HOO33_07925 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HOO33_07925 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HOO33_07930 PF10502 Signal peptidase, peptidase S26 HOO33_07935 PF02502 Ribose/Galactose Isomerase HOO33_07975 PF00563 EAL domain HOO33_07975 PF08495 FIST N domain HOO33_07975 PF10442 FIST C domain HOO33_07975 PF00990 Diguanylate cyclase, GGDEF domain HOO33_07980 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HOO33_07980 PF01243 Pyridoxamine 5'-phosphate oxidase HOO33_07985 PF16916 Dimerisation domain of Zinc Transporter HOO33_07985 PF01545 Cation efflux family HOO33_07990 PF00563 EAL domain HOO33_07990 PF03707 Bacterial signalling protein N terminal repeat HOO33_07990 PF00990 Diguanylate cyclase, GGDEF domain HOO33_07995 PF03880 DbpA RNA binding domain HOO33_07995 PF00270 DEAD/DEAH box helicase HOO33_07995 PF00271 Helicase conserved C-terminal domain HOO33_08015 PF00183 Hsp90 protein HOO33_08020 PF01590 GAF domain HOO33_08020 PF00990 Diguanylate cyclase, GGDEF domain HOO33_08020 PF00360 Phytochrome region HOO33_08020 PF00563 EAL domain HOO33_08025 PF00072 Response regulator receiver domain HOO33_08025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO33_08025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_08025 PF00672 HAMP domain HOO33_08025 PF01627 Hpt domain HOO33_08025 PF00512 His Kinase A (phospho-acceptor) domain HOO33_08040 PF00491 Arginase family HOO33_08050 PF08713 DNA alkylation repair enzyme HOO33_08055 PF04073 Aminoacyl-tRNA editing domain HOO33_08090 PF04403 Paraquat-inducible protein A HOO33_08095 PF02470 MlaD protein HOO33_08100 PF00199 Catalase HOO33_08100 PF06628 Catalase-related immune-responsive HOO33_08105 PF12796 Ankyrin repeats (3 copies) HOO33_08105 PF00023 Ankyrin repeat HOO33_08115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HOO33_08115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HOO33_08120 PF00682 HMGL-like HOO33_08120 PF08502 LeuA allosteric (dimerisation) domain HOO33_08125 PF12833 Helix-turn-helix domain HOO33_08130 PF00924 Mechanosensitive ion channel HOO33_08135 PF02833 DHHA2 domain HOO33_08135 PF01368 DHH family HOO33_08140 PF02810 SEC-C motif HOO33_08150 PF00206 Lyase HOO33_08150 PF10415 Fumarase C C-terminus HOO33_08155 PF01048 Phosphorylase superfamily HOO33_08160 PF00698 Acyl transferase domain HOO33_08165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO33_08180 PF04052 TolB amino-terminal domain HOO33_08190 PF02472 Biopolymer transport protein ExbD/TolR HOO33_08195 PF01618 MotA/TolQ/ExbB proton channel family HOO33_08200 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HOO33_08205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO33_08205 PF02874 ATP synthase alpha/beta family, beta-barrel domain HOO33_08210 PF00231 ATP synthase HOO33_08215 PF00306 ATP synthase alpha/beta chain, C terminal domain HOO33_08215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO33_08215 PF02874 ATP synthase alpha/beta family, beta-barrel domain HOO33_08220 PF00213 ATP synthase delta (OSCP) subunit HOO33_08225 PF00430 ATP synthase B/B' CF(0) HOO33_08235 PF02195 ParB-like nuclease domain HOO33_08235 PF17762 HTH domain found in ParB protein HOO33_08240 PF13614 AAA domain HOO33_08255 PF08447 PAS fold HOO33_08255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_08260 PF00551 Formyl transferase HOO33_08260 PF02911 Formyl transferase, C-terminal domain HOO33_08265 PF00696 Amino acid kinase family HOO33_08270 PF01926 50S ribosome-binding GTPase HOO33_08270 PF01018 GTP1/OBG HOO33_08275 PF01016 Ribosomal L27 protein HOO33_08280 PF00829 Ribosomal prokaryotic L21 protein HOO33_08285 PF08275 DNA primase catalytic core, N-terminal domain HOO33_08285 PF01807 CHC2 zinc finger HOO33_08285 PF16730 DnaG-primase C-terminal, helicase-binding domain HOO33_08285 PF13662 Toprim domain HOO33_08295 PF00035 Double-stranded RNA binding motif HOO33_08295 PF14622 Ribonuclease-III-like HOO33_08300 PF01264 Chorismate synthase HOO33_08310 PF03976 Polyphosphate kinase 2 (PPK2) HOO33_08325 PF01625 Peptide methionine sulfoxide reductase HOO33_08335 PF00202 Aminotransferase class-III HOO33_08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_08340 PF08448 PAS fold HOO33_08340 PF08447 PAS fold HOO33_08345 PF01808 AICARFT/IMPCHase bienzyme HOO33_08345 PF02142 MGS-like domain HOO33_08350 PF00586 AIR synthase related protein, N-terminal domain HOO33_08350 PF02769 AIR synthase related protein, C-terminal domain HOO33_08350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HOO33_08360 PF01464 Transglycosylase SLT domain HOO33_08360 PF01551 Peptidase family M23 HOO33_08360 PF10145 Phage-related minor tail protein HOO33_08365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HOO33_08365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HOO33_08380 PF00575 S1 RNA binding domain HOO33_08380 PF09371 Tex-like protein N-terminal domain HOO33_08380 PF16921 Tex protein YqgF-like domain HOO33_08380 PF17674 HHH domain HOO33_08385 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HOO33_08390 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HOO33_08395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HOO33_08400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HOO33_08400 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HOO33_08410 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HOO33_08410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HOO33_08410 PF10531 SLBB domain HOO33_08415 PF00285 Citrate synthase, C-terminal domain HOO33_08420 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HOO33_08420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HOO33_08420 PF00384 Molybdopterin oxidoreductase HOO33_08425 PF00146 NADH dehydrogenase HOO33_08430 PF12838 4Fe-4S dicluster domain HOO33_08435 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HOO33_08440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HOO33_08445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HOO33_08445 PF00361 Proton-conducting membrane transporter HOO33_08450 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HOO33_08450 PF00361 Proton-conducting membrane transporter HOO33_08455 PF00361 Proton-conducting membrane transporter HOO33_08460 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HOO33_08465 PF00890 FAD binding domain HOO33_08465 PF02910 Fumarate reductase flavoprotein C-term HOO33_08470 PF13085 2Fe-2S iron-sulfur cluster binding domain HOO33_08470 PF13183 4Fe-4S dicluster domain HOO33_08475 PF00350 Dynamin family HOO33_08480 PF00350 Dynamin family HOO33_08490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HOO33_08490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HOO33_08495 PF02504 Fatty acid synthesis protein HOO33_08500 PF01783 Ribosomal L32p protein family HOO33_08510 PF00334 Nucleoside diphosphate kinase HOO33_08520 PF00578 AhpC/TSA family HOO33_08520 PF10417 C-terminal domain of 1-Cys peroxiredoxin HOO33_08525 PF07497 Rho termination factor, RNA-binding domain HOO33_08525 PF07498 Rho termination factor, N-terminal domain HOO33_08525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO33_08530 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HOO33_08530 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HOO33_08535 PF01177 Asp/Glu/Hydantoin racemase HOO33_08540 PF12169 DNA polymerase III subunits gamma and tau domain III HOO33_08540 PF12170 DNA polymerase III tau subunit V interacting with alpha HOO33_08550 PF03900 Porphobilinogen deaminase, C-terminal domain HOO33_08550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HOO33_08555 PF00857 Isochorismatase family HOO33_08580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO33_08580 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HOO33_08595 PF00115 Cytochrome C and Quinol oxidase polypeptide I HOO33_08600 PF01668 SmpB protein HOO33_08605 PF00288 GHMP kinases N terminal domain HOO33_08610 PF01509 TruB family pseudouridylate synthase (N terminal domain) HOO33_08615 PF13361 UvrD-like helicase C-terminal domain HOO33_08615 PF00580 UvrD/REP helicase N-terminal domain HOO33_08620 PF03466 LysR substrate binding domain HOO33_08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO33_08625 PF16199 Radical_SAM C-terminal domain HOO33_08625 PF04055 Radical SAM superfamily HOO33_08630 PF00156 Phosphoribosyl transferase domain HOO33_08630 PF13537 Glutamine amidotransferase domain HOO33_08635 PF05173 Dihydrodipicolinate reductase, C-terminus HOO33_08635 PF01113 Dihydrodipicolinate reductase, N-terminus HOO33_08640 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO33_08645 PF00085 Thioredoxin HOO33_08650 PF01411 tRNA synthetases class II (A) HOO33_08650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HOO33_08650 PF02272 DHHA1 domain HOO33_08680 PF00486 Transcriptional regulatory protein, C terminal HOO33_08680 PF00072 Response regulator receiver domain HOO33_08685 PF13180 PDZ domain HOO33_08685 PF17820 PDZ domain HOO33_08690 PF00920 Dehydratase family HOO33_08710 PF00589 Phage integrase family HOO33_08710 PF14659 Phage integrase, N-terminal SAM-like domain HOO33_08710 PF13356 Arm DNA-binding domain HOO33_08760 PF00239 Resolvase, N terminal domain HOO33_08760 PF02796 Helix-turn-helix domain of resolvase HOO33_08770 PF01695 IstB-like ATP binding protein HOO33_08775 PF00665 Integrase core domain HOO33_08800 PF00145 C-5 cytosine-specific DNA methylase HOO33_08840 PF09383 NIL domain HOO33_08840 PF00005 ABC transporter HOO33_08860 PF01142 tRNA pseudouridine synthase D (TruD) HOO33_08875 PF03572 Peptidase family S41 HOO33_08875 PF13180 PDZ domain HOO33_08880 PF01259 SAICAR synthetase HOO33_08885 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HOO33_08900 PF01553 Acyltransferase HOO33_08905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HOO33_08910 PF02416 mttA/Hcf106 family HOO33_08915 PF02416 mttA/Hcf106 family HOO33_08920 PF00750 tRNA synthetases class I (R) HOO33_08920 PF05746 DALR anticodon binding domain HOO33_08920 PF03485 Arginyl tRNA synthetase N terminal domain HOO33_08930 PF01467 Cytidylyltransferase-like HOO33_08935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HOO33_08935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HOO33_08940 PF00162 Phosphoglycerate kinase HOO33_08945 PF00121 Triosephosphate isomerase HOO33_08955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HOO33_08955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HOO33_08960 PF01842 ACT domain HOO33_08960 PF01817 Chorismate mutase type II HOO33_08960 PF00800 Prephenate dehydratase HOO33_08965 PF00155 Aminotransferase class I and II HOO33_08970 PF02780 Transketolase, C-terminal domain HOO33_08970 PF02779 Transketolase, pyrimidine binding domain HOO33_08970 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HOO33_08975 PF00034 Cytochrome c HOO33_08975 PF03150 Di-haem cytochrome c peroxidase HOO33_08985 PF02545 Maf-like protein HOO33_08995 PF00877 NlpC/P60 family HOO33_09005 PF00939 Sodium:sulfate symporter transmembrane region HOO33_09015 PF02683 Cytochrome C biogenesis protein transmembrane region HOO33_09015 PF11412 Disulphide bond corrector protein DsbC HOO33_09015 PF00085 Thioredoxin HOO33_09020 PF00085 Thioredoxin HOO33_09025 PF08443 RimK-like ATP-grasp domain HOO33_09025 PF18030 RimK PreATP-grasp domain HOO33_09040 PF00990 Diguanylate cyclase, GGDEF domain HOO33_09040 PF08495 FIST N domain HOO33_09040 PF00563 EAL domain HOO33_09040 PF10442 FIST C domain HOO33_09045 PF02666 Phosphatidylserine decarboxylase HOO33_09055 PF04055 Radical SAM superfamily HOO33_09065 PF00484 Carbonic anhydrase HOO33_09070 PF00155 Aminotransferase class I and II HOO33_09075 PF02021 Uncharacterised protein family UPF0102 HOO33_09085 PF00224 Pyruvate kinase, barrel domain HOO33_09085 PF00391 PEP-utilising enzyme, mobile domain HOO33_09085 PF02887 Pyruvate kinase, alpha/beta domain HOO33_09095 PF13426 PAS domain HOO33_09095 PF00512 His Kinase A (phospho-acceptor) domain HOO33_09095 PF00672 HAMP domain HOO33_09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_09100 PF00486 Transcriptional regulatory protein, C terminal HOO33_09100 PF00072 Response regulator receiver domain HOO33_09110 PF02561 Flagellar protein FliS HOO33_09125 PF02107 Flagellar L-ring protein HOO33_09150 PF01313 Bacterial export proteins, family 3 HOO33_09160 PF02119 Flagellar P-ring protein HOO33_09165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO33_09165 PF02154 Flagellar motor switch protein FliM HOO33_09175 PF00543 Nitrogen regulatory protein P-II HOO33_09180 PF00909 Ammonium Transporter Family HOO33_09185 PF12796 Ankyrin repeats (3 copies) HOO33_09185 PF13606 Ankyrin repeat HOO33_09190 PF08335 GlnD PII-uridylyltransferase HOO33_09190 PF01966 HD domain HOO33_09200 PF02040 Arsenical pump membrane protein HOO33_09215 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HOO33_09230 PF01451 Low molecular weight phosphotyrosine protein phosphatase HOO33_09240 PF02779 Transketolase, pyrimidine binding domain HOO33_09240 PF00456 Transketolase, thiamine diphosphate binding domain HOO33_09240 PF02780 Transketolase, C-terminal domain HOO33_09250 PF08447 PAS fold HOO33_09250 PF08448 PAS fold HOO33_09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_09255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO33_09255 PF00672 HAMP domain HOO33_09255 PF02203 Tar ligand binding domain homologue HOO33_09260 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HOO33_09275 PF00682 HMGL-like HOO33_09275 PF02436 Conserved carboxylase domain HOO33_09305 PF05690 Thiazole biosynthesis protein ThiG HOO33_09310 PF03091 CutA1 divalent ion tolerance protein HOO33_09315 PF03853 YjeF-related protein N-terminus HOO33_09315 PF01256 Carbohydrate kinase HOO33_09325 PF00814 Glycoprotease family HOO33_09340 PF13288 DXP reductoisomerase C-terminal domain HOO33_09340 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HOO33_09340 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HOO33_09370 PF03129 Anticodon binding domain HOO33_09370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HOO33_09370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO33_09375 PF05198 Translation initiation factor IF-3, N-terminal domain HOO33_09375 PF00707 Translation initiation factor IF-3, C-terminal domain HOO33_09380 PF01632 Ribosomal protein L35 HOO33_09385 PF00453 Ribosomal protein L20 HOO33_09395 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO33_09400 PF12804 MobA-like NTP transferase domain HOO33_09405 PF00330 Aconitase family (aconitate hydratase) HOO33_09410 PF03960 ArsC family HOO33_09415 PF04303 PrpF protein HOO33_09420 PF00694 Aconitase C-terminal domain HOO33_09420 PF00330 Aconitase family (aconitate hydratase) HOO33_09425 PF00285 Citrate synthase, C-terminal domain HOO33_09440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO33_09440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO33_09445 PF01474 Class-II DAHP synthetase family HOO33_09450 PF00923 Transaldolase/Fructose-6-phosphate aldolase HOO33_09465 PF03652 Holliday junction resolvase HOO33_09470 PF03616 Sodium/glutamate symporter HOO33_09485 PF01648 4'-phosphopantetheinyl transferase superfamily HOO33_09490 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_09495 PF02569 Pantoate-beta-alanine ligase HOO33_09505 PF00919 Uncharacterized protein family UPF0004 HOO33_09505 PF04055 Radical SAM superfamily HOO33_09505 PF18693 TRAM domain HOO33_09510 PF01171 PP-loop family HOO33_09530 PF17969 L,D-transpeptidase C-terminal domain HOO33_09530 PF03734 L,D-transpeptidase catalytic domain HOO33_09540 PF08274 PhnA Zinc-Ribbon HOO33_09540 PF03831 PhnA domain HOO33_09545 PF12849 PBP superfamily domain HOO33_09550 PF00563 EAL domain HOO33_09550 PF00990 Diguanylate cyclase, GGDEF domain HOO33_09550 PF03707 Bacterial signalling protein N terminal repeat HOO33_09555 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_09560 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_09565 PF00005 ABC transporter HOO33_09570 PF01895 PhoU domain HOO33_09580 PF00072 Response regulator receiver domain HOO33_09580 PF00486 Transcriptional regulatory protein, C terminal HOO33_09585 PF16736 Single Cache-like HOO33_09585 PF00989 PAS fold HOO33_09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_09585 PF00512 His Kinase A (phospho-acceptor) domain HOO33_09590 PF00572 Ribosomal protein L13 HOO33_09595 PF00380 Ribosomal protein S9/S16 HOO33_09600 PF03070 TENA/THI-4/PQQC family HOO33_09605 PF02110 Hydroxyethylthiazole kinase family HOO33_09610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO33_09615 PF13419 Haloacid dehalogenase-like hydrolase HOO33_09635 PF09383 NIL domain HOO33_09635 PF00005 ABC transporter HOO33_09640 PF02405 Permease MlaE HOO33_09645 PF02664 S-Ribosylhomocysteinase (LuxS) HOO33_09650 PF01266 FAD dependent oxidoreductase HOO33_09650 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HOO33_09655 PF07943 Penicillin-binding protein 5, C-terminal domain HOO33_09655 PF00768 D-alanyl-D-alanine carboxypeptidase HOO33_09665 PF13188 PAS domain HOO33_09665 PF13426 PAS domain HOO33_09665 PF00989 PAS fold HOO33_09665 PF00512 His Kinase A (phospho-acceptor) domain HOO33_09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_09670 PF02574 Homocysteine S-methyltransferase HOO33_09670 PF00809 Pterin binding enzyme HOO33_09670 PF02965 Vitamin B12 dependent methionine synthase, activation domain HOO33_09670 PF02310 B12 binding domain HOO33_09670 PF02607 B12 binding domain HOO33_09680 PF01063 Amino-transferase class IV HOO33_09695 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HOO33_09695 PF01502 Phosphoribosyl-AMP cyclohydrolase HOO33_09705 PF01883 Iron-sulfur cluster assembly protein HOO33_09705 PF10609 NUBPL iron-transfer P-loop NTPase HOO33_09710 PF01964 Radical SAM ThiC family HOO33_09720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HOO33_09720 PF02542 YgbB family HOO33_09730 PF04608 Phosphatidylglycerophosphatase A HOO33_09735 PF03462 PCRF domain HOO33_09735 PF00472 RF-1 domain HOO33_09740 PF01649 Ribosomal protein S20 HOO33_09745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HOO33_09745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HOO33_09745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HOO33_09745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HOO33_09750 PF01252 Signal peptidase (SPase) II HOO33_09755 PF00202 Aminotransferase class-III HOO33_09765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HOO33_09765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HOO33_09770 PF00425 chorismate binding enzyme HOO33_09775 PF01063 Amino-transferase class IV HOO33_09780 PF00117 Glutamine amidotransferase class-I HOO33_09780 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HOO33_09790 PF00709 Adenylosuccinate synthetase HOO33_09795 PF13393 Histidyl-tRNA synthetase HOO33_09800 PF00266 Aminotransferase class-V HOO33_09825 PF02678 Pirin HOO33_09825 PF17954 Quercetinase C-terminal cupin domain HOO33_09830 PF09962 Uncharacterized conserved protein (DUF2196) HOO33_09835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HOO33_09835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HOO33_09845 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO33_09850 PF00486 Transcriptional regulatory protein, C terminal HOO33_09850 PF00072 Response regulator receiver domain HOO33_09855 PF00989 PAS fold HOO33_09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_09855 PF00512 His Kinase A (phospho-acceptor) domain HOO33_09860 PF00586 AIR synthase related protein, N-terminal domain HOO33_09860 PF02769 AIR synthase related protein, C-terminal domain HOO33_09865 PF17284 Spermidine synthase tetramerisation domain HOO33_09870 PF01121 Dephospho-CoA kinase HOO33_09880 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HOO33_09880 PF13746 4Fe-4S dicluster domain HOO33_09880 PF12801 4Fe-4S binding domain HOO33_09885 PF00117 Glutamine amidotransferase class-I HOO33_09885 PF06418 CTP synthase N-terminus HOO33_09890 PF02272 DHHA1 domain HOO33_09890 PF01368 DHH family HOO33_09890 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HOO33_09890 PF17768 RecJ OB domain HOO33_09905 PF01965 DJ-1/PfpI family HOO33_09910 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO33_09910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO33_09910 PF14579 Helix-hairpin-helix motif HOO33_09910 PF02811 PHP domain HOO33_09915 PF01975 Survival protein SurE HOO33_09930 PF01967 MoaC family HOO33_09935 PF01165 Ribosomal protein S21 HOO33_09940 PF02535 ZIP Zinc transporter HOO33_09985 PF07669 Eco57I restriction-modification methylase HOO33_09990 PF01695 IstB-like ATP binding protein HOO33_09995 PF00665 Integrase core domain HOO33_10015 PF01040 UbiA prenyltransferase family HOO33_10030 PF01197 Ribosomal protein L31 HOO33_10035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO33_10040 PF08032 RNA 2'-O ribose methyltransferase substrate binding HOO33_10040 PF00588 SpoU rRNA Methylase family HOO33_10050 PF00155 Aminotransferase class I and II HOO33_10055 PF01842 ACT domain HOO33_10055 PF00742 Homoserine dehydrogenase HOO33_10055 PF03447 Homoserine dehydrogenase, NAD binding domain HOO33_10060 PF00849 RNA pseudouridylate synthase HOO33_10065 PF00206 Lyase HOO33_10065 PF10397 Adenylosuccinate lyase C-terminus HOO33_10070 PF00317 Ribonucleotide reductase, all-alpha domain HOO33_10070 PF03477 ATP cone domain HOO33_10070 PF02867 Ribonucleotide reductase, barrel domain HOO33_10075 PF00268 Ribonucleotide reductase, small chain HOO33_10080 PF05736 OprF membrane domain HOO33_10080 PF00691 OmpA family HOO33_10090 PF07715 TonB-dependent Receptor Plug Domain HOO33_10090 PF00593 TonB dependent receptor HOO33_10100 PF08448 PAS fold HOO33_10100 PF08447 PAS fold HOO33_10100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_10105 PF00486 Transcriptional regulatory protein, C terminal HOO33_10105 PF00072 Response regulator receiver domain HOO33_10125 PF00107 Zinc-binding dehydrogenase HOO33_10125 PF08240 Alcohol dehydrogenase GroES-like domain HOO33_10130 PF01638 HxlR-like helix-turn-helix HOO33_10135 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HOO33_10135 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HOO33_10140 PF02934 GatB/GatE catalytic domain HOO33_10140 PF02637 GatB domain HOO33_10150 PF01872 RibD C-terminal domain HOO33_10150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO33_10155 PF00364 Biotin-requiring enzyme HOO33_10160 PF00289 Biotin carboxylase, N-terminal domain HOO33_10160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HOO33_10160 PF02785 Biotin carboxylase C-terminal domain HOO33_10165 PF00271 Helicase conserved C-terminal domain HOO33_10165 PF00270 DEAD/DEAH box helicase HOO33_10170 PF00313 'Cold-shock' DNA-binding domain HOO33_10185 PF01384 Phosphate transporter family HOO33_10195 PF00733 Asparagine synthase HOO33_10195 PF13537 Glutamine amidotransferase domain HOO33_10215 PF13638 PIN domain HOO33_10215 PF02562 PhoH-like protein HOO33_10220 PF03653 Uncharacterised protein family (UPF0093) HOO33_10225 PF05496 Holliday junction DNA helicase RuvB P-loop domain HOO33_10225 PF01661 Macro domain HOO33_10225 PF16193 AAA C-terminal domain HOO33_10225 PF12002 MgsA AAA+ ATPase C terminal HOO33_10230 PF00849 RNA pseudouridylate synthase HOO33_10230 PF01479 S4 domain HOO33_10235 PF00571 CBS domain HOO33_10235 PF01380 SIS domain HOO33_10240 PF00753 Metallo-beta-lactamase superfamily HOO33_10240 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HOO33_10240 PF17770 Ribonuclease J C-terminal domain HOO33_10245 PF00398 Ribosomal RNA adenine dimethylase HOO33_10250 PF00977 Histidine biosynthesis protein HOO33_10265 PF04055 Radical SAM superfamily HOO33_10270 PF00749 tRNA synthetases class I (E and Q), catalytic domain HOO33_10275 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HOO33_10280 PF00486 Transcriptional regulatory protein, C terminal HOO33_10280 PF00072 Response regulator receiver domain HOO33_10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO33_10305 PF00873 AcrB/AcrD/AcrF family HOO33_10310 PF04264 YceI-like domain HOO33_10315 PF00291 Pyridoxal-phosphate dependent enzyme HOO33_10330 PF00149 Calcineurin-like phosphoesterase HOO33_10335 PF00011 Hsp20/alpha crystallin family HOO33_10345 PF12857 TOBE-like domain HOO33_10345 PF17850 CysA C-terminal regulatory domain HOO33_10345 PF00005 ABC transporter HOO33_10350 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_10355 PF00528 Binding-protein-dependent transport system inner membrane component HOO33_10375 PF00563 EAL domain HOO33_10375 PF08495 FIST N domain HOO33_10375 PF10442 FIST C domain HOO33_10375 PF00990 Diguanylate cyclase, GGDEF domain HOO33_10380 PF00899 ThiF family HOO33_10380 PF00581 Rhodanese-like domain HOO33_10395 PF02082 Transcriptional regulator HOO33_10400 PF03144 Elongation factor Tu domain 2 HOO33_10400 PF00009 Elongation factor Tu GTP binding domain HOO33_10400 PF00679 Elongation factor G C-terminus HOO33_10405 PF04143 Sulphur transport HOO33_10410 PF01206 Sulfurtransferase TusA HOO33_10415 PF00884 Sulfatase HOO33_10415 PF08019 Phosphoethanolamine transferase EptA/EptB HOO33_10425 PF01219 Prokaryotic diacylglycerol kinase HOO33_10455 PF00072 Response regulator receiver domain HOO33_10455 PF00486 Transcriptional regulatory protein, C terminal HOO33_10465 PF11849 Domain of unknown function (DUF3369) HOO33_10475 PF02511 Thymidylate synthase complementing protein HOO33_10480 PF03458 UPF0126 domain HOO33_10490 PF00551 Formyl transferase HOO33_10495 PF02075 Crossover junction endodeoxyribonuclease RuvC