locus-tag class description Arnit_0001 PF00308 Bacterial dnaA protein Arnit_0001 PF11638 DnaA N-terminal domain Arnit_0001 PF08299 Bacterial dnaA protein helix-turn-helix Arnit_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Arnit_0002 PF02767 DNA polymerase III beta subunit, central domain Arnit_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Arnit_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0003 PF00204 DNA gyrase B Arnit_0003 PF00986 DNA gyrase B subunit, carboxyl terminus Arnit_0003 PF01751 Toprim domain Arnit_0004 PF05973 Phage derived protein Gp49-like (DUF891) Arnit_0006 PF01863 Protein of unknown function DUF45 Arnit_0008 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_0010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Arnit_0011 PF00171 Aldehyde dehydrogenase family Arnit_0012 PF13378 Enolase C-terminal domain-like Arnit_0012 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Arnit_0013 PF00701 Dihydrodipicolinate synthetase family Arnit_0018 PF00892 EamA-like transporter family Arnit_0019 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_0020 PF14489 QueF-like protein Arnit_0023 PF09335 SNARE associated Golgi protein Arnit_0024 PF03459 TOBE domain Arnit_0024 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Arnit_0025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0025 PF08447 PAS fold Arnit_0025 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0025 PF00989 PAS fold Arnit_0026 PF00037 4Fe-4S binding domain Arnit_0028 PF10431 C-terminal, D2-small domain, of ClpB protein Arnit_0028 PF07724 AAA domain (Cdc48 subfamily) Arnit_0028 PF06689 ClpX C4-type zinc finger Arnit_0031 PF00158 Sigma-54 interaction domain Arnit_0031 PF01590 GAF domain Arnit_0031 PF02954 Bacterial regulatory protein, Fis family Arnit_0033 PF02910 Fumarate reductase flavoprotein C-term Arnit_0033 PF00890 FAD binding domain Arnit_0034 PF00248 Aldo/keto reductase family Arnit_0035 PF10518 TAT (twin-arginine translocation) pathway signal sequence Arnit_0035 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Arnit_0035 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Arnit_0036 PF00374 Nickel-dependent hydrogenase Arnit_0037 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Arnit_0037 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Arnit_0039 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0041 PF00005 ABC transporter Arnit_0041 PF08402 TOBE domain Arnit_0042 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0045 PF03459 TOBE domain Arnit_0045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Arnit_0047 PF00148 Nitrogenase component 1 type Oxidoreductase Arnit_0049 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Arnit_0050 PF02080 TrkA-C domain Arnit_0050 PF02254 TrkA-N domain Arnit_0051 PF02386 Cation transport protein Arnit_0052 PF00486 Transcriptional regulatory protein, C terminal Arnit_0052 PF00072 Response regulator receiver domain Arnit_0053 PF02702 Osmosensitive K+ channel His kinase sensor domain Arnit_0053 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0053 PF13493 Domain of unknown function (DUF4118) Arnit_0053 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0054 PF08447 PAS fold Arnit_0054 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0054 PF13426 PAS domain Arnit_0055 PF04552 Sigma-54, DNA binding domain Arnit_0055 PF04963 Sigma-54 factor, core binding domain Arnit_0055 PF00309 Sigma-54 factor, Activator interacting domain (AID) Arnit_0056 PF00111 2Fe-2S iron-sulfur cluster binding domain Arnit_0060 PF00258 Flavodoxin Arnit_0061 PF03270 Protein of unknown function, DUF269 Arnit_0062 PF02579 Dinitrogenase iron-molybdenum cofactor Arnit_0066 PF08534 Redoxin Arnit_0071 PF01594 AI-2E family transporter Arnit_0076 PF02579 Dinitrogenase iron-molybdenum cofactor Arnit_0077 PF00753 Metallo-beta-lactamase superfamily Arnit_0077 PF00258 Flavodoxin Arnit_0079 PF03960 ArsC family Arnit_0080 PF04055 Radical SAM superfamily Arnit_0080 PF02579 Dinitrogenase iron-molybdenum cofactor Arnit_0082 PF00682 HMGL-like Arnit_0088 PF00849 RNA pseudouridylate synthase Arnit_0089 PF10397 Adenylosuccinate lyase C-terminus Arnit_0089 PF00206 Lyase Arnit_0090 PF02867 Ribonucleotide reductase, barrel domain Arnit_0090 PF00317 Ribonucleotide reductase, all-alpha domain Arnit_0090 PF03477 ATP cone domain Arnit_0091 PF00268 Ribonucleotide reductase, small chain Arnit_0093 PF08448 PAS fold Arnit_0093 PF00990 Diguanylate cyclase, GGDEF domain Arnit_0095 PF01810 LysE type translocator Arnit_0096 PF00892 EamA-like transporter family Arnit_0097 PF12833 Helix-turn-helix domain Arnit_0098 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Arnit_0102 PF01451 Low molecular weight phosphotyrosine protein phosphatase Arnit_0103 PF00795 Carbon-nitrogen hydrolase Arnit_0104 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Arnit_0104 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Arnit_0104 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Arnit_0104 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Arnit_0105 PF01810 LysE type translocator Arnit_0108 PF00072 Response regulator receiver domain Arnit_0108 PF00486 Transcriptional regulatory protein, C terminal Arnit_0109 PF07568 Histidine kinase Arnit_0109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0109 PF12282 Signal transduction histidine kinase Arnit_0110 PF00171 Aldehyde dehydrogenase family Arnit_0111 PF00211 Adenylate and Guanylate cyclase catalytic domain Arnit_0112 PF00107 Zinc-binding dehydrogenase Arnit_0112 PF08240 Alcohol dehydrogenase GroES-like domain Arnit_0113 PF16867 Dimethlysulfonioproprionate lyase Arnit_0114 PF01638 HxlR-like helix-turn-helix Arnit_0115 PF03649 Uncharacterised protein family (UPF0014) Arnit_0116 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Arnit_0116 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Arnit_0118 PF02934 GatB/GatE catalytic domain Arnit_0118 PF02637 GatB domain Arnit_0119 PF09312 SurA N-terminal domain Arnit_0119 PF00639 PPIC-type PPIASE domain Arnit_0122 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Arnit_0124 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_0125 PF00072 Response regulator receiver domain Arnit_0125 PF00486 Transcriptional regulatory protein, C terminal Arnit_0126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0126 PF00989 PAS fold Arnit_0126 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0127 PF02589 LUD domain Arnit_0128 PF11870 Domain of unknown function (DUF3390) Arnit_0128 PF13183 4Fe-4S dicluster domain Arnit_0128 PF02589 LUD domain Arnit_0129 PF02754 Cysteine-rich domain Arnit_0131 PF01872 RibD C-terminal domain Arnit_0131 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Arnit_0132 PF00364 Biotin-requiring enzyme Arnit_0133 PF02785 Biotin carboxylase C-terminal domain Arnit_0133 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Arnit_0133 PF00289 Biotin carboxylase, N-terminal domain Arnit_0134 PF00271 Helicase conserved C-terminal domain Arnit_0134 PF00270 DEAD/DEAH box helicase Arnit_0136 PF01384 Phosphate transporter family Arnit_0138 PF00733 Asparagine synthase Arnit_0138 PF13537 Glutamine amidotransferase domain Arnit_0141 PF13085 2Fe-2S iron-sulfur cluster binding domain Arnit_0141 PF13183 4Fe-4S dicluster domain Arnit_0142 PF00890 FAD binding domain Arnit_0142 PF02910 Fumarate reductase flavoprotein C-term Arnit_0144 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Arnit_0144 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Arnit_0145 PF13638 PIN domain Arnit_0145 PF02562 PhoH-like protein Arnit_0147 PF05496 Holliday junction DNA helicase RuvB P-loop domain Arnit_0147 PF12002 MgsA AAA+ ATPase C terminal Arnit_0147 PF01661 Macro domain Arnit_0147 PF16193 AAA C-terminal domain Arnit_0148 PF00849 RNA pseudouridylate synthase Arnit_0148 PF01479 S4 domain Arnit_0149 PF01380 SIS domain Arnit_0149 PF00571 CBS domain Arnit_0150 PF00753 Metallo-beta-lactamase superfamily Arnit_0150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Arnit_0150 PF17770 Ribonuclease J C-terminal domain Arnit_0151 PF00398 Ribosomal RNA adenine dimethylase Arnit_0152 PF00977 Histidine biosynthesis protein Arnit_0155 PF04055 Radical SAM superfamily Arnit_0156 PF00749 tRNA synthetases class I (E and Q), catalytic domain Arnit_0158 PF00403 Heavy-metal-associated domain Arnit_0159 PF00486 Transcriptional regulatory protein, C terminal Arnit_0159 PF00072 Response regulator receiver domain Arnit_0164 PF00873 AcrB/AcrD/AcrF family Arnit_0167 PF00742 Homoserine dehydrogenase Arnit_0167 PF03447 Homoserine dehydrogenase, NAD binding domain Arnit_0167 PF01842 ACT domain Arnit_0168 PF00155 Aminotransferase class I and II Arnit_0170 PF00588 SpoU rRNA Methylase family Arnit_0170 PF08032 RNA 2'-O ribose methyltransferase substrate binding Arnit_0171 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Arnit_0172 PF01197 Ribosomal protein L31 Arnit_0174 PF00795 Carbon-nitrogen hydrolase Arnit_0174 PF00583 Acetyltransferase (GNAT) family Arnit_0175 PF01040 UbiA prenyltransferase family Arnit_0190 PF06114 IrrE N-terminal-like domain Arnit_0196 PF00069 Protein kinase domain Arnit_0196 PF03793 PASTA domain Arnit_0200 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_0202 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Arnit_0207 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0208 PF13407 Periplasmic binding protein domain Arnit_0210 PF05161 MOFRL family Arnit_0210 PF13660 Domain of unknown function (DUF4147) Arnit_0212 PF00128 Alpha amylase, catalytic domain Arnit_0213 PF00483 Nucleotidyl transferase Arnit_0214 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Arnit_0214 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Arnit_0215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Arnit_0216 PF00920 Dehydratase family Arnit_0217 PF01081 KDPG and KHG aldolase Arnit_0218 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Arnit_0218 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Arnit_0218 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Arnit_0218 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Arnit_0219 PF00342 Phosphoglucose isomerase Arnit_0222 PF08274 PhnA Zinc-Ribbon Arnit_0222 PF03831 PhnA domain Arnit_0223 PF02222 ATP-grasp domain Arnit_0224 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Arnit_0225 PF01678 Diaminopimelate epimerase Arnit_0226 PF01121 Dephospho-CoA kinase Arnit_0227 PF17284 Spermidine synthase tetramerisation domain Arnit_0228 PF02769 AIR synthase related protein, C-terminal domain Arnit_0228 PF00586 AIR synthase related protein, N-terminal domain Arnit_0231 PF01047 MarR family Arnit_0232 PF02678 Pirin Arnit_0232 PF17954 Quercetinase C-terminal cupin domain Arnit_0233 PF02525 Flavodoxin-like fold Arnit_0234 PF04264 YceI-like domain Arnit_0236 PF00266 Aminotransferase class-V Arnit_0237 PF13393 Histidyl-tRNA synthetase Arnit_0238 PF00709 Adenylosuccinate synthetase Arnit_0240 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Arnit_0240 PF00117 Glutamine amidotransferase class-I Arnit_0243 PF08279 HTH domain Arnit_0243 PF00072 Response regulator receiver domain Arnit_0244 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Arnit_0244 PF02542 YgbB family Arnit_0247 PF01964 Radical SAM ThiC family Arnit_0249 PF10609 NUBPL iron-transfer P-loop NTPase Arnit_0249 PF01883 Iron-sulfur cluster assembly protein Arnit_0250 PF01053 Cys/Met metabolism PLP-dependent enzyme Arnit_0251 PF01053 Cys/Met metabolism PLP-dependent enzyme Arnit_0254 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Arnit_0254 PF01502 Phosphoribosyl-AMP cyclohydrolase Arnit_0257 PF01063 Amino-transferase class IV Arnit_0258 PF03848 Tellurite resistance protein TehB Arnit_0259 PF02607 B12 binding domain Arnit_0259 PF02310 B12 binding domain Arnit_0259 PF02965 Vitamin B12 dependent methionine synthase, activation domain Arnit_0259 PF02574 Homocysteine S-methyltransferase Arnit_0259 PF00809 Pterin binding enzyme Arnit_0261 PF09997 Predicted membrane protein (DUF2238) Arnit_0262 PF03951 Glutamine synthetase, beta-Grasp domain Arnit_0262 PF00120 Glutamine synthetase, catalytic domain Arnit_0263 PF02311 AraC-like ligand binding domain Arnit_0263 PF12833 Helix-turn-helix domain Arnit_0264 PF01810 LysE type translocator Arnit_0267 PF02664 S-Ribosylhomocysteinase (LuxS) Arnit_0272 PF00158 Sigma-54 interaction domain Arnit_0272 PF02954 Bacterial regulatory protein, Fis family Arnit_0275 PF17746 SfsA N-terminal OB domain Arnit_0275 PF03749 Sugar fermentation stimulation protein RE domain Arnit_0276 PF05145 Transition state regulatory protein AbrB Arnit_0277 PF00484 Carbonic anhydrase Arnit_0278 PF00072 Response regulator receiver domain Arnit_0278 PF13188 PAS domain Arnit_0278 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0278 PF08448 PAS fold Arnit_0279 PF00486 Transcriptional regulatory protein, C terminal Arnit_0279 PF00072 Response regulator receiver domain Arnit_0279 PF01627 Hpt domain Arnit_0280 PF01970 Tripartite tricarboxylate transporter TctA family Arnit_0284 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Arnit_0285 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Arnit_0285 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Arnit_0287 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Arnit_0288 PF13419 Haloacid dehalogenase-like hydrolase Arnit_0289 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Arnit_0290 PF00380 Ribosomal protein S9/S16 Arnit_0291 PF00572 Ribosomal protein L13 Arnit_0292 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0293 PF00072 Response regulator receiver domain Arnit_0293 PF00486 Transcriptional regulatory protein, C terminal Arnit_0295 PF01895 PhoU domain Arnit_0296 PF00563 EAL domain Arnit_0296 PF12792 CSS motif domain associated with EAL Arnit_0297 PF03462 PCRF domain Arnit_0297 PF00472 RF-1 domain Arnit_0298 PF01649 Ribosomal protein S20 Arnit_0299 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Arnit_0299 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Arnit_0299 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Arnit_0299 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Arnit_0300 PF01252 Signal peptidase (SPase) II Arnit_0301 PF00330 Aconitase family (aconitate hydratase) Arnit_0302 PF12804 MobA-like NTP transferase domain Arnit_0303 PF00453 Ribosomal protein L20 Arnit_0304 PF01632 Ribosomal protein L35 Arnit_0305 PF00707 Translation initiation factor IF-3, C-terminal domain Arnit_0305 PF05198 Translation initiation factor IF-3, N-terminal domain Arnit_0306 PF03129 Anticodon binding domain Arnit_0306 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Arnit_0306 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Arnit_0308 PF03129 Anticodon binding domain Arnit_0308 PF13393 Histidyl-tRNA synthetase Arnit_0310 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Arnit_0310 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Arnit_0310 PF13288 DXP reductoisomerase C-terminal domain Arnit_0314 PF00814 Glycoprotease family Arnit_0315 PF01253 Translation initiation factor SUI1 Arnit_0316 PF03853 YjeF-related protein N-terminus Arnit_0316 PF01256 Carbohydrate kinase Arnit_0317 PF03091 CutA1 divalent ion tolerance protein Arnit_0318 PF05690 Thiazole biosynthesis protein ThiG Arnit_0321 PF12833 Helix-turn-helix domain Arnit_0325 PF00491 Arginase family Arnit_0326 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0327 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0328 PF00005 ABC transporter Arnit_0329 PF03466 LysR substrate binding domain Arnit_0329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Arnit_0330 PF07568 Histidine kinase Arnit_0330 PF12282 Signal transduction histidine kinase Arnit_0330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0332 PF00486 Transcriptional regulatory protein, C terminal Arnit_0332 PF00072 Response regulator receiver domain Arnit_0334 PF00571 CBS domain Arnit_0334 PF00005 ABC transporter Arnit_0335 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0336 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Arnit_0337 PF09339 IclR helix-turn-helix domain Arnit_0337 PF01614 Bacterial transcriptional regulator Arnit_0338 PF03401 Tripartite tricarboxylate transporter family receptor Arnit_0340 PF01970 Tripartite tricarboxylate transporter TctA family Arnit_0341 PF03737 Aldolase/RraA Arnit_0342 PF00266 Aminotransferase class-V Arnit_0343 PF00708 Acylphosphatase Arnit_0344 PF00753 Metallo-beta-lactamase superfamily Arnit_0344 PF12706 Beta-lactamase superfamily domain Arnit_0346 PF02885 Glycosyl transferase family, helical bundle domain Arnit_0346 PF00591 Glycosyl transferase family, a/b domain Arnit_0346 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Arnit_0346 PF00625 Guanylate kinase Arnit_0347 PF00132 Bacterial transferase hexapeptide (six repeats) Arnit_0348 PF07969 Amidohydrolase family Arnit_0349 PF00005 ABC transporter Arnit_0350 PF00005 ABC transporter Arnit_0351 PF06007 Phosphonate metabolism protein PhnJ Arnit_0352 PF05861 Bacterial phosphonate metabolism protein (PhnI) Arnit_0355 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0357 PF00005 ABC transporter Arnit_0359 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Arnit_0359 PF00072 Response regulator receiver domain Arnit_0359 PF01627 Hpt domain Arnit_0359 PF00672 HAMP domain Arnit_0359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0359 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0360 PF00072 Response regulator receiver domain Arnit_0360 PF00486 Transcriptional regulatory protein, C terminal Arnit_0362 PF02203 Tar ligand binding domain homologue Arnit_0362 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0362 PF00672 HAMP domain Arnit_0363 PF00483 Nucleotidyl transferase Arnit_0364 PF00342 Phosphoglucose isomerase Arnit_0366 PF03150 Di-haem cytochrome c peroxidase Arnit_0373 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arnit_0374 PF00005 ABC transporter Arnit_0374 PF02687 FtsX-like permease family Arnit_0374 PF12704 MacB-like periplasmic core domain Arnit_0375 PF00005 ABC transporter Arnit_0375 PF02687 FtsX-like permease family Arnit_0375 PF12704 MacB-like periplasmic core domain Arnit_0380 PF07694 5TMR of 5TMR-LYT Arnit_0380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0380 PF06580 Histidine kinase Arnit_0381 PF04397 LytTr DNA-binding domain Arnit_0381 PF00072 Response regulator receiver domain Arnit_0382 PF00255 Glutathione peroxidase Arnit_0384 PF00762 Ferrochelatase Arnit_0385 PF03109 ABC1 family Arnit_0387 PF02581 Thiamine monophosphate synthase Arnit_0387 PF08543 Phosphomethylpyrimidine kinase Arnit_0388 PF17200 Single Cache domain 2 Arnit_0388 PF00672 HAMP domain Arnit_0388 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0388 PF17200 Single Cache domain 2 Arnit_0388 PF00672 HAMP domain Arnit_0388 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0390 PF12833 Helix-turn-helix domain Arnit_0390 PF00072 Response regulator receiver domain Arnit_0391 PF00989 PAS fold Arnit_0391 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0392 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Arnit_0393 PF00700 Bacterial flagellin C-terminal helical region Arnit_0393 PF00669 Bacterial flagellin N-terminal helical region Arnit_0394 PF01142 tRNA pseudouridine synthase D (TruD) Arnit_0395 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0397 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Arnit_0397 PF18267 Rubredoxin NAD+ reductase C-terminal domain Arnit_0397 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_0397 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Arnit_0397 PF04324 BFD-like [2Fe-2S] binding domain Arnit_0398 PF03793 PASTA domain Arnit_0398 PF00069 Protein kinase domain Arnit_0399 PF02560 Cyanate lyase C-terminal domain Arnit_0401 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0401 PF08448 PAS fold Arnit_0401 PF00072 Response regulator receiver domain Arnit_0401 PF13188 PAS domain Arnit_0402 PF00486 Transcriptional regulatory protein, C terminal Arnit_0402 PF00072 Response regulator receiver domain Arnit_0403 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_0403 PF01568 Molydopterin dinucleotide binding domain Arnit_0403 PF00384 Molybdopterin oxidoreductase Arnit_0404 PF00005 ABC transporter Arnit_0405 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0406 PF00005 ABC transporter Arnit_0407 PF00672 HAMP domain Arnit_0407 PF02743 Cache domain Arnit_0407 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0408 PF15437 Plasminogen-binding protein pgbA C-terminal Arnit_0410 PF03572 Peptidase family S41 Arnit_0410 PF13180 PDZ domain Arnit_0411 PF01259 SAICAR synthetase Arnit_0412 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Arnit_0415 PF01553 Acyltransferase Arnit_0416 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Arnit_0417 PF02416 mttA/Hcf106 family Arnit_0418 PF00750 tRNA synthetases class I (R) Arnit_0418 PF05746 DALR anticodon binding domain Arnit_0418 PF03485 Arginyl tRNA synthetase N terminal domain Arnit_0421 PF01467 Cytidylyltransferase-like Arnit_0422 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Arnit_0422 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Arnit_0423 PF00162 Phosphoglycerate kinase Arnit_0424 PF00121 Triosephosphate isomerase Arnit_0426 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Arnit_0426 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Arnit_0427 PF13344 Haloacid dehalogenase-like hydrolase Arnit_0428 PF00800 Prephenate dehydratase Arnit_0428 PF01842 ACT domain Arnit_0428 PF01817 Chorismate mutase type II Arnit_0429 PF00155 Aminotransferase class I and II Arnit_0430 PF02779 Transketolase, pyrimidine binding domain Arnit_0430 PF02780 Transketolase, C-terminal domain Arnit_0430 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Arnit_0432 PF02545 Maf-like protein Arnit_0433 PF07690 Major Facilitator Superfamily Arnit_0437 PF00877 NlpC/P60 family Arnit_0439 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Arnit_0439 PF01411 tRNA synthetases class II (A) Arnit_0439 PF02272 DHHA1 domain Arnit_0440 PF00085 Thioredoxin Arnit_0441 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_0442 PF00939 Sodium:sulfate symporter transmembrane region Arnit_0443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0443 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0444 PF00486 Transcriptional regulatory protein, C terminal Arnit_0444 PF00072 Response regulator receiver domain Arnit_0446 PF13183 4Fe-4S dicluster domain Arnit_0446 PF13085 2Fe-2S iron-sulfur cluster binding domain Arnit_0447 PF02910 Fumarate reductase flavoprotein C-term Arnit_0447 PF00890 FAD binding domain Arnit_0448 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Arnit_0449 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_0450 PF01113 Dihydrodipicolinate reductase, N-terminus Arnit_0450 PF05173 Dihydrodipicolinate reductase, C-terminus Arnit_0451 PF00156 Phosphoribosyl transferase domain Arnit_0452 PF16199 Radical_SAM C-terminal domain Arnit_0452 PF04055 Radical SAM superfamily Arnit_0453 PF03466 LysR substrate binding domain Arnit_0453 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Arnit_0454 PF13361 UvrD-like helicase C-terminal domain Arnit_0454 PF00580 UvrD/REP helicase N-terminal domain Arnit_0455 PF01509 TruB family pseudouridylate synthase (N terminal domain) Arnit_0456 PF00288 GHMP kinases N terminal domain Arnit_0457 PF01668 SmpB protein Arnit_0458 PF00115 Cytochrome C and Quinol oxidase polypeptide I Arnit_0461 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Arnit_0461 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Arnit_0467 PF00472 RF-1 domain Arnit_0467 PF03462 PCRF domain Arnit_0469 PF05538 Campylobacter major outer membrane protein Arnit_0471 PF02660 Glycerol-3-phosphate acyltransferase Arnit_0472 PF02445 Quinolinate synthetase A protein Arnit_0473 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Arnit_0473 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Arnit_0474 PF03948 Ribosomal protein L9, C-terminal domain Arnit_0474 PF02272 DHHA1 domain Arnit_0474 PF01281 Ribosomal protein L9, N-terminal domain Arnit_0474 PF01368 DHH family Arnit_0475 PF01476 LysM domain Arnit_0475 PF01551 Peptidase family M23 Arnit_0476 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Arnit_0478 PF08544 GHMP kinases C terminal Arnit_0478 PF00288 GHMP kinases N terminal domain Arnit_0480 PF04760 Translation initiation factor IF-2, N-terminal region Arnit_0480 PF00009 Elongation factor Tu GTP binding domain Arnit_0480 PF11987 Translation-initiation factor 2 Arnit_0481 PF02033 Ribosome-binding factor A Arnit_0482 PF02576 RimP N-terminal domain Arnit_0483 PF01810 LysE type translocator Arnit_0484 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Arnit_0484 PF01872 RibD C-terminal domain Arnit_0486 PF08207 Elongation factor P (EF-P) KOW-like domain Arnit_0486 PF01132 Elongation factor P (EF-P) OB domain Arnit_0486 PF09285 Elongation factor P, C-terminal Arnit_0487 PF01842 ACT domain Arnit_0487 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Arnit_0487 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Arnit_0488 PF00575 S1 RNA binding domain Arnit_0489 PF02401 LytB protein Arnit_0490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Arnit_0491 PF03484 tRNA synthetase B5 domain Arnit_0491 PF03147 Ferredoxin-fold anticodon binding domain Arnit_0491 PF01588 Putative tRNA binding domain Arnit_0491 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Arnit_0492 PF01409 tRNA synthetases class II core domain (F) Arnit_0492 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Arnit_0493 PF01230 HIT domain Arnit_0494 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Arnit_0495 PF02801 Beta-ketoacyl synthase, C-terminal domain Arnit_0495 PF00109 Beta-ketoacyl synthase, N-terminal domain Arnit_0496 PF00550 Phosphopantetheine attachment site Arnit_0498 PF04055 Radical SAM superfamily Arnit_0500 PF06508 Queuosine biosynthesis protein QueC Arnit_0501 PF03453 MoeA N-terminal region (domain I and II) Arnit_0501 PF03454 MoeA C-terminal region (domain IV) Arnit_0501 PF00994 Probable molybdopterin binding domain Arnit_0503 PF04452 RNA methyltransferase Arnit_0504 PF00486 Transcriptional regulatory protein, C terminal Arnit_0504 PF00072 Response regulator receiver domain Arnit_0508 PF00032 Cytochrome b(C-terminal)/b6/petD Arnit_0508 PF00033 Cytochrome b/b6/petB Arnit_0509 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Arnit_0509 PF00355 Rieske [2Fe-2S] domain Arnit_0510 PF00291 Pyridoxal-phosphate dependent enzyme Arnit_0511 PF00696 Amino acid kinase family Arnit_0512 PF00580 UvrD/REP helicase N-terminal domain Arnit_0512 PF13361 UvrD-like helicase C-terminal domain Arnit_0514 PF00119 ATP synthase A chain Arnit_0515 PF00291 Pyridoxal-phosphate dependent enzyme Arnit_0515 PF13291 ACT domain Arnit_0516 PF08267 Cobalamin-independent synthase, N-terminal domain Arnit_0516 PF01717 Cobalamin-independent synthase, Catalytic domain Arnit_0518 PF01746 tRNA (Guanine-1)-methyltransferase Arnit_0519 PF01245 Ribosomal protein L19 Arnit_0521 PF04055 Radical SAM superfamily Arnit_0523 PF00005 ABC transporter Arnit_0524 PF00950 ABC 3 transport family Arnit_0525 PF09335 SNARE associated Golgi protein Arnit_0526 PF00106 short chain dehydrogenase Arnit_0527 PF00571 CBS domain Arnit_0527 PF03448 MgtE intracellular N domain Arnit_0527 PF01769 Divalent cation transporter Arnit_0528 PF12821 Threonine/Serine exporter, ThrE Arnit_0529 PF06738 Putative threonine/serine exporter Arnit_0530 PF12833 Helix-turn-helix domain Arnit_0531 PF00593 TonB dependent receptor Arnit_0531 PF07715 TonB-dependent Receptor Plug Domain Arnit_0532 PF16916 Dimerisation domain of Zinc Transporter Arnit_0532 PF01545 Cation efflux family Arnit_0535 PF00593 TonB dependent receptor Arnit_0535 PF07715 TonB-dependent Receptor Plug Domain Arnit_0536 PF04954 Siderophore-interacting protein Arnit_0536 PF08021 Siderophore-interacting FAD-binding domain Arnit_0536 PF00005 ABC transporter Arnit_0536 PF00664 ABC transporter transmembrane region Arnit_0537 PF00664 ABC transporter transmembrane region Arnit_0537 PF00005 ABC transporter Arnit_0539 PF07690 Major Facilitator Superfamily Arnit_0540 PF02659 Putative manganese efflux pump Arnit_0541 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_0542 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0544 PF03309 Type III pantothenate kinase Arnit_0545 PF01634 ATP phosphoribosyltransferase Arnit_0548 PF00579 tRNA synthetases class I (W and Y) Arnit_0553 PF07715 TonB-dependent Receptor Plug Domain Arnit_0553 PF00593 TonB dependent receptor Arnit_0555 PF00072 Response regulator receiver domain Arnit_0555 PF12833 Helix-turn-helix domain Arnit_0556 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0556 PF00989 PAS fold Arnit_0556 PF08447 PAS fold Arnit_0556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0560 PF07664 Ferrous iron transport protein B C terminus Arnit_0560 PF02421 Ferrous iron transport protein B Arnit_0560 PF07670 Nucleoside recognition Arnit_0564 PF02472 Biopolymer transport protein ExbD/TolR Arnit_0565 PF01618 MotA/TolQ/ExbB proton channel family Arnit_0566 PF01618 MotA/TolQ/ExbB proton channel family Arnit_0570 PF00593 TonB dependent receptor Arnit_0570 PF07715 TonB-dependent Receptor Plug Domain Arnit_0571 PF02403 Seryl-tRNA synthetase N-terminal domain Arnit_0571 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Arnit_0573 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_0574 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Arnit_0574 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Arnit_0576 PF00672 HAMP domain Arnit_0576 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0576 PF02743 Cache domain Arnit_0577 PF01810 LysE type translocator Arnit_0578 PF00005 ABC transporter Arnit_0579 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0580 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0581 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_0584 PF13486 Reductive dehalogenase subunit Arnit_0584 PF12838 4Fe-4S dicluster domain Arnit_0585 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Arnit_0586 PF00037 4Fe-4S binding domain Arnit_0586 PF12801 4Fe-4S binding domain Arnit_0587 PF12838 4Fe-4S dicluster domain Arnit_0587 PF12800 4Fe-4S binding domain Arnit_0588 PF10518 TAT (twin-arginine translocation) pathway signal sequence Arnit_0588 PF01568 Molydopterin dinucleotide binding domain Arnit_0588 PF00384 Molybdopterin oxidoreductase Arnit_0588 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_0589 PF00591 Glycosyl transferase family, a/b domain Arnit_0589 PF02885 Glycosyl transferase family, helical bundle domain Arnit_0590 PF10414 Sirohaem synthase dimerisation region Arnit_0590 PF14824 Sirohaem biosynthesis protein central Arnit_0590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Arnit_0591 PF10414 Sirohaem synthase dimerisation region Arnit_0591 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Arnit_0591 PF14824 Sirohaem biosynthesis protein central Arnit_0594 PF04055 Radical SAM superfamily Arnit_0594 PF06463 Molybdenum Cofactor Synthesis C Arnit_0596 PF00005 ABC transporter Arnit_0597 PF00312 Ribosomal protein S15 Arnit_0600 PF00072 Response regulator receiver domain Arnit_0600 PF02954 Bacterial regulatory protein, Fis family Arnit_0600 PF00158 Sigma-54 interaction domain Arnit_0601 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Arnit_0601 PF01464 Transglycosylase SLT domain Arnit_0602 PF17200 Single Cache domain 2 Arnit_0602 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0602 PF00672 HAMP domain Arnit_0603 PF01022 Bacterial regulatory protein, arsR family Arnit_0604 PF02040 Arsenical pump membrane protein Arnit_0605 PF01451 Low molecular weight phosphotyrosine protein phosphatase Arnit_0607 PF13380 CoA binding domain Arnit_0608 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0608 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0608 PF08521 Two-component sensor kinase N-terminal Arnit_0609 PF00486 Transcriptional regulatory protein, C terminal Arnit_0609 PF00072 Response regulator receiver domain Arnit_0610 PF00639 PPIC-type PPIASE domain Arnit_0611 PF01116 Fructose-bisphosphate aldolase class-II Arnit_0612 PF00589 Phage integrase family Arnit_0612 PF13356 Arm DNA-binding domain Arnit_0632 PF01638 HxlR-like helix-turn-helix Arnit_0633 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arnit_0634 PF00873 AcrB/AcrD/AcrF family Arnit_0635 PF02321 Outer membrane efflux protein Arnit_0637 PF08495 FIST N domain Arnit_0637 PF00563 EAL domain Arnit_0637 PF00990 Diguanylate cyclase, GGDEF domain Arnit_0637 PF10442 FIST C domain Arnit_0638 PF02472 Biopolymer transport protein ExbD/TolR Arnit_0641 PF08448 PAS fold Arnit_0641 PF00072 Response regulator receiver domain Arnit_0641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0641 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0641 PF13188 PAS domain Arnit_0642 PF01202 Shikimate kinase Arnit_0643 PF00815 Histidinol dehydrogenase Arnit_0645 PF00348 Polyprenyl synthetase Arnit_0646 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Arnit_0646 PF01488 Shikimate / quinate 5-dehydrogenase Arnit_0646 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Arnit_0647 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Arnit_0647 PF04073 Aminoacyl-tRNA editing domain Arnit_0647 PF03129 Anticodon binding domain Arnit_0648 PF05552 Conserved TM helix Arnit_0648 PF00924 Mechanosensitive ion channel Arnit_0649 PF01743 Poly A polymerase head domain Arnit_0649 PF12627 Probable RNA and SrmB- binding site of polymerase A Arnit_0649 PF01966 HD domain Arnit_0651 PF02699 Preprotein translocase subunit Arnit_0652 PF02355 Protein export membrane protein Arnit_0653 PF07549 SecD/SecF GG Motif Arnit_0653 PF02355 Protein export membrane protein Arnit_0657 PF13603 Leucyl-tRNA synthetase, Domain 2 Arnit_0657 PF09334 tRNA synthetases class I (M) Arnit_0657 PF00133 tRNA synthetases class I (I, L, M and V) Arnit_0659 PF08245 Mur ligase middle domain Arnit_0660 PF04225 Opacity-associated protein A LysM-like domain Arnit_0660 PF01551 Peptidase family M23 Arnit_0663 PF00999 Sodium/hydrogen exchanger family Arnit_0663 PF02254 TrkA-N domain Arnit_0666 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0666 PF00672 HAMP domain Arnit_0666 PF02203 Tar ligand binding domain homologue Arnit_0668 PF02559 CarD-like/TRCF domain Arnit_0668 PF00270 DEAD/DEAH box helicase Arnit_0668 PF00271 Helicase conserved C-terminal domain Arnit_0668 PF03461 TRCF domain Arnit_0668 PF17757 UvrB interaction domain Arnit_0669 PF08447 PAS fold Arnit_0669 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0671 PF01654 Cytochrome bd terminal oxidase subunit I Arnit_0676 PF00486 Transcriptional regulatory protein, C terminal Arnit_0676 PF00072 Response regulator receiver domain Arnit_0677 PF08521 Two-component sensor kinase N-terminal Arnit_0677 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0677 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0679 PF00950 ABC 3 transport family Arnit_0680 PF00005 ABC transporter Arnit_0683 PF13277 YmdB-like protein Arnit_0687 PF01209 ubiE/COQ5 methyltransferase family Arnit_0688 PF02601 Exonuclease VII, large subunit Arnit_0688 PF13742 OB-fold nucleic acid binding domain Arnit_0689 PF01584 CheW-like domain Arnit_0690 PF00072 Response regulator receiver domain Arnit_0690 PF12833 Helix-turn-helix domain Arnit_0691 PF00486 Transcriptional regulatory protein, C terminal Arnit_0691 PF00072 Response regulator receiver domain Arnit_0692 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Arnit_0694 PF02261 Aspartate decarboxylase Arnit_0695 PF02575 YbaB/EbfC DNA-binding family Arnit_0696 PF00348 Polyprenyl synthetase Arnit_0697 PF00166 Chaperonin 10 Kd subunit Arnit_0698 PF00118 TCP-1/cpn60 chaperonin family Arnit_0700 PF01380 SIS domain Arnit_0701 PF00438 S-adenosylmethionine synthetase, N-terminal domain Arnit_0701 PF02773 S-adenosylmethionine synthetase, C-terminal domain Arnit_0701 PF02772 S-adenosylmethionine synthetase, central domain Arnit_0702 PF01039 Carboxyl transferase domain Arnit_0702 PF17848 Acetyl-coA carboxylase zinc finger domain Arnit_0703 PF02581 Thiamine monophosphate synthase Arnit_0704 PF02590 Predicted SPOUT methyltransferase Arnit_0705 PF01258 Prokaryotic dksA/traR C4-type zinc finger Arnit_0707 PF01207 Dihydrouridine synthase (Dus) Arnit_0709 PF17862 AAA+ lid domain Arnit_0709 PF01434 Peptidase family M41 Arnit_0709 PF00004 ATPase family associated with various cellular activities (AAA) Arnit_0711 PF00682 HMGL-like Arnit_0711 PF08502 LeuA allosteric (dimerisation) domain Arnit_0712 PF07556 Protein of unknown function (DUF1538) Arnit_0715 PF01624 MutS domain I Arnit_0715 PF05192 MutS domain III Arnit_0715 PF05188 MutS domain II Arnit_0715 PF00488 MutS domain V Arnit_0715 PF05190 MutS family domain IV Arnit_0717 PF13520 Amino acid permease Arnit_0718 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Arnit_0719 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Arnit_0720 PF00563 EAL domain Arnit_0720 PF00990 Diguanylate cyclase, GGDEF domain Arnit_0720 PF03707 Bacterial signalling protein N terminal repeat Arnit_0721 PF00072 Response regulator receiver domain Arnit_0723 PF00977 Histidine biosynthesis protein Arnit_0724 PF08338 Domain of unknown function (DUF1731) Arnit_0724 PF01370 NAD dependent epimerase/dehydratase family Arnit_0725 PF00117 Glutamine amidotransferase class-I Arnit_0727 PF00672 HAMP domain Arnit_0727 PF02203 Tar ligand binding domain homologue Arnit_0727 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0730 PF12798 4Fe-4S binding domain Arnit_0730 PF00037 4Fe-4S binding domain Arnit_0731 PF00361 Proton-conducting membrane transporter Arnit_0732 PF00146 NADH dehydrogenase Arnit_0733 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Arnit_0734 PF00361 Proton-conducting membrane transporter Arnit_0734 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Arnit_0735 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Arnit_0735 PF00374 Nickel-dependent hydrogenase Arnit_0735 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Arnit_0737 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Arnit_0740 PF01226 Formate/nitrite transporter Arnit_0741 PF01568 Molydopterin dinucleotide binding domain Arnit_0741 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_0741 PF00384 Molybdopterin oxidoreductase Arnit_0744 PF00679 Elongation factor G C-terminus Arnit_0744 PF00009 Elongation factor Tu GTP binding domain Arnit_0744 PF03144 Elongation factor Tu domain 2 Arnit_0744 PF06421 GTP-binding protein LepA C-terminus Arnit_0745 PF00691 OmpA family Arnit_0745 PF13505 Outer membrane protein beta-barrel domain Arnit_0746 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Arnit_0746 PF14572 Phosphoribosyl synthetase-associated domain Arnit_0749 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Arnit_0750 PF01321 Creatinase/Prolidase N-terminal domain Arnit_0750 PF00557 Metallopeptidase family M24 Arnit_0751 PF01220 Dehydroquinase class II Arnit_0752 PF01979 Amidohydrolase family Arnit_0753 PF01343 Peptidase family S49 Arnit_0754 PF00871 Acetokinase family Arnit_0755 PF01515 Phosphate acetyl/butaryl transferase Arnit_0758 PF00871 Acetokinase family Arnit_0761 PF00474 Sodium:solute symporter family Arnit_0763 PF00486 Transcriptional regulatory protein, C terminal Arnit_0763 PF00072 Response regulator receiver domain Arnit_0765 PF02464 Competence-damaged protein Arnit_0765 PF18146 Damage-inducible protein CinA KH domain Arnit_0765 PF00994 Probable molybdopterin binding domain Arnit_0766 PF06039 Malate:quinone oxidoreductase (Mqo) Arnit_0767 PF08264 Anticodon-binding domain of tRNA Arnit_0767 PF00133 tRNA synthetases class I (I, L, M and V) Arnit_0771 PF08245 Mur ligase middle domain Arnit_0771 PF02875 Mur ligase family, glutamate ligase domain Arnit_0775 PF01882 Protein of unknown function DUF58 Arnit_0776 PF17863 AAA lid domain Arnit_0776 PF07726 ATPase family associated with various cellular activities (AAA) Arnit_0778 PF02203 Tar ligand binding domain homologue Arnit_0778 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0778 PF00672 HAMP domain Arnit_0779 PF00318 Ribosomal protein S2 Arnit_0780 PF00889 Elongation factor TS Arnit_0781 PF00005 ABC transporter Arnit_0783 PF00625 Guanylate kinase Arnit_0784 PF10442 FIST C domain Arnit_0784 PF00990 Diguanylate cyclase, GGDEF domain Arnit_0784 PF08495 FIST N domain Arnit_0784 PF00563 EAL domain Arnit_0785 PF00403 Heavy-metal-associated domain Arnit_0788 PF00664 ABC transporter transmembrane region Arnit_0788 PF00005 ABC transporter Arnit_0789 PF00762 Ferrochelatase Arnit_0791 PF01875 Memo-like protein Arnit_0792 PF02698 DUF218 domain Arnit_0793 PF17783 CvfB-like winged helix domain Arnit_0793 PF13509 S1 domain Arnit_0794 PF08534 Redoxin Arnit_0796 PF00174 Oxidoreductase molybdopterin binding domain Arnit_0797 PF01794 Ferric reductase like transmembrane component Arnit_0798 PF05199 GMC oxidoreductase Arnit_0798 PF00732 GMC oxidoreductase Arnit_0800 PF00580 UvrD/REP helicase N-terminal domain Arnit_0800 PF13361 UvrD-like helicase C-terminal domain Arnit_0801 PF08495 FIST N domain Arnit_0801 PF00990 Diguanylate cyclase, GGDEF domain Arnit_0801 PF00563 EAL domain Arnit_0801 PF10442 FIST C domain Arnit_0802 PF00990 Diguanylate cyclase, GGDEF domain Arnit_0802 PF07694 5TMR of 5TMR-LYT Arnit_0803 PF08264 Anticodon-binding domain of tRNA Arnit_0803 PF00133 tRNA synthetases class I (I, L, M and V) Arnit_0803 PF10458 Valyl tRNA synthetase tRNA binding arm Arnit_0805 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_0806 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arnit_0807 PF00873 AcrB/AcrD/AcrF family Arnit_0808 PF00873 AcrB/AcrD/AcrF family Arnit_0812 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arnit_0812 PF00529 HlyD membrane-fusion protein of T1SS Arnit_0813 PF00873 AcrB/AcrD/AcrF family Arnit_0814 PF02321 Outer membrane efflux protein Arnit_0815 PF04204 Homoserine O-succinyltransferase Arnit_0817 PF00873 AcrB/AcrD/AcrF family Arnit_0820 PF07690 Major Facilitator Superfamily Arnit_0821 PF01725 Ham1 family Arnit_0825 PF14748 Pyrroline-5-carboxylate reductase dimerisation Arnit_0825 PF03807 NADP oxidoreductase coenzyme F420-dependent Arnit_0827 PF00004 ATPase family associated with various cellular activities (AAA) Arnit_0827 PF05362 Lon protease (S16) C-terminal proteolytic domain Arnit_0827 PF02190 ATP-dependent protease La (LON) substrate-binding domain Arnit_0830 PF11799 impB/mucB/samB family C-terminal domain Arnit_0830 PF00817 impB/mucB/samB family Arnit_0830 PF11798 IMS family HHH motif Arnit_0835 PF18030 RimK PreATP-grasp domain Arnit_0835 PF08443 RimK-like ATP-grasp domain Arnit_0839 PF04011 LemA family Arnit_0840 PF02203 Tar ligand binding domain homologue Arnit_0840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0840 PF00672 HAMP domain Arnit_0843 PF00137 ATP synthase subunit C Arnit_0844 PF00990 Diguanylate cyclase, GGDEF domain Arnit_0844 PF10442 FIST C domain Arnit_0844 PF08495 FIST N domain Arnit_0844 PF00563 EAL domain Arnit_0846 PF00072 Response regulator receiver domain Arnit_0846 PF00486 Transcriptional regulatory protein, C terminal Arnit_0847 PF02203 Tar ligand binding domain homologue Arnit_0847 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0847 PF00672 HAMP domain Arnit_0848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0848 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0848 PF13426 PAS domain Arnit_0848 PF13188 PAS domain Arnit_0848 PF00989 PAS fold Arnit_0852 PF02311 AraC-like ligand binding domain Arnit_0852 PF12833 Helix-turn-helix domain Arnit_0853 PF02630 SCO1/SenC Arnit_0856 PF06965 Na+/H+ antiporter 1 Arnit_0859 PF03824 High-affinity nickel-transport protein Arnit_0860 PF02203 Tar ligand binding domain homologue Arnit_0860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0860 PF00672 HAMP domain Arnit_0861 PF00672 HAMP domain Arnit_0861 PF02203 Tar ligand binding domain homologue Arnit_0861 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_0862 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Arnit_0865 PF17158 Membrane-associated sensor, integral membrane domain Arnit_0865 PF00990 Diguanylate cyclase, GGDEF domain Arnit_0869 PF01883 Iron-sulfur cluster assembly protein Arnit_0870 PF02657 Fe-S metabolism associated domain Arnit_0871 PF00266 Aminotransferase class-V Arnit_0873 PF00005 ABC transporter Arnit_0874 PF01458 Uncharacterized protein family (UPF0051) Arnit_0875 PF00266 Aminotransferase class-V Arnit_0876 PF04324 BFD-like [2Fe-2S] binding domain Arnit_0876 PF01592 NifU-like N terminal domain Arnit_0876 PF01106 NifU-like domain Arnit_0877 PF00171 Aldehyde dehydrogenase family Arnit_0878 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Arnit_0878 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Arnit_0881 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_0883 PF00005 ABC transporter Arnit_0883 PF08402 TOBE domain Arnit_0884 PF00005 ABC transporter Arnit_0884 PF17912 MalK OB fold domain Arnit_0885 PF01266 FAD dependent oxidoreductase Arnit_0885 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Arnit_0886 PF00392 Bacterial regulatory proteins, gntR family Arnit_0886 PF07702 UTRA domain Arnit_0887 PF07702 UTRA domain Arnit_0887 PF00392 Bacterial regulatory proteins, gntR family Arnit_0888 PF00206 Lyase Arnit_0888 PF14698 Argininosuccinate lyase C-terminal Arnit_0889 PF00486 Transcriptional regulatory protein, C terminal Arnit_0889 PF00072 Response regulator receiver domain Arnit_0889 PF01627 Hpt domain Arnit_0890 PF00899 ThiF family Arnit_0891 PF01272 Transcription elongation factor, GreA/GreB, C-term Arnit_0891 PF03449 Transcription elongation factor, N-terminal Arnit_0892 PF00149 Calcineurin-like phosphoesterase Arnit_0894 PF17757 UvrB interaction domain Arnit_0894 PF02151 UvrB/uvrC motif Arnit_0894 PF12344 Ultra-violet resistance protein B Arnit_0894 PF04851 Type III restriction enzyme, res subunit Arnit_0894 PF00271 Helicase conserved C-terminal domain Arnit_0895 PF10502 Signal peptidase, peptidase S26 Arnit_0898 PF00730 HhH-GPD superfamily base excision DNA repair protein Arnit_0898 PF10576 Iron-sulfur binding domain of endonuclease III Arnit_0898 PF00633 Helix-hairpin-helix motif Arnit_0907 PF02502 Ribose/Galactose Isomerase Arnit_0908 PF10502 Signal peptidase, peptidase S26 Arnit_0909 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Arnit_0909 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Arnit_0911 PF01386 Ribosomal L25p family Arnit_0911 PF14693 Ribosomal protein TL5, C-terminal domain Arnit_0912 PF01195 Peptidyl-tRNA hydrolase Arnit_0915 PF01520 N-acetylmuramoyl-L-alanine amidase Arnit_0915 PF11741 AMIN domain Arnit_0917 PF00579 tRNA synthetases class I (W and Y) Arnit_0917 PF01479 S4 domain Arnit_0918 PF02824 TGS domain Arnit_0918 PF04607 Region found in RelA / SpoT proteins Arnit_0918 PF13291 ACT domain Arnit_0919 PF01192 RNA polymerase Rpb6 Arnit_0920 PF00696 Amino acid kinase family Arnit_0922 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Arnit_0923 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Arnit_0924 PF04715 Anthranilate synthase component I, N terminal region Arnit_0924 PF00425 chorismate binding enzyme Arnit_0926 PF00464 Serine hydroxymethyltransferase Arnit_0927 PF00152 tRNA synthetases class II (D, K and N) Arnit_0927 PF01336 OB-fold nucleic acid binding domain Arnit_0929 PF00989 PAS fold Arnit_0929 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0929 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0930 PF04551 GcpE protein Arnit_0931 PF01494 FAD binding domain Arnit_0932 PF03796 DnaB-like helicase C terminal domain Arnit_0932 PF00772 DnaB-like helicase N terminal domain Arnit_0933 PF00459 Inositol monophosphatase family Arnit_0936 PF08645 Polynucleotide kinase 3 phosphatase Arnit_0937 PF14743 DNA ligase OB-like domain Arnit_0937 PF01068 ATP dependent DNA ligase domain Arnit_0938 PF01370 NAD dependent epimerase/dehydratase family Arnit_0939 PF01467 Cytidylyltransferase-like Arnit_0939 PF00294 pfkB family carbohydrate kinase Arnit_0940 PF13580 SIS domain Arnit_0941 PF00156 Phosphoribosyl transferase domain Arnit_0942 PF00291 Pyridoxal-phosphate dependent enzyme Arnit_0944 PF00883 Cytosol aminopeptidase family, catalytic domain Arnit_0944 PF02789 Cytosol aminopeptidase family, N-terminal domain Arnit_0945 PF07836 DmpG-like communication domain Arnit_0945 PF00682 HMGL-like Arnit_0947 PF01168 Alanine racemase, N-terminal domain Arnit_0947 PF00842 Alanine racemase, C-terminal domain Arnit_0948 PF01266 FAD dependent oxidoreductase Arnit_0949 PF01042 Endoribonuclease L-PSP Arnit_0951 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_0953 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Arnit_0960 PF00266 Aminotransferase class-V Arnit_0962 PF02634 FdhD/NarQ family Arnit_0964 PF13247 4Fe-4S dicluster domain Arnit_0965 PF01568 Molydopterin dinucleotide binding domain Arnit_0965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_0965 PF00384 Molybdopterin oxidoreductase Arnit_0966 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_0966 PF01568 Molydopterin dinucleotide binding domain Arnit_0966 PF00384 Molybdopterin oxidoreductase Arnit_0971 PF13247 4Fe-4S dicluster domain Arnit_0972 PF01568 Molydopterin dinucleotide binding domain Arnit_0972 PF00384 Molybdopterin oxidoreductase Arnit_0972 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_0973 PF00384 Molybdopterin oxidoreductase Arnit_0973 PF01568 Molydopterin dinucleotide binding domain Arnit_0978 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_0978 PF00512 His Kinase A (phospho-acceptor) domain Arnit_0979 PF00072 Response regulator receiver domain Arnit_0979 PF00158 Sigma-54 interaction domain Arnit_0979 PF02954 Bacterial regulatory protein, Fis family Arnit_0982 PF01841 Transglutaminase-like superfamily Arnit_0984 PF01869 BadF/BadG/BcrA/BcrD ATPase family Arnit_0985 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Arnit_0986 PF00586 AIR synthase related protein, N-terminal domain Arnit_0986 PF02769 AIR synthase related protein, C-terminal domain Arnit_0987 PF03841 L-seryl-tRNA selenium transferase Arnit_0988 PF09106 Elongation factor SelB, winged helix Arnit_0988 PF00009 Elongation factor Tu GTP binding domain Arnit_0988 PF03144 Elongation factor Tu domain 2 Arnit_0988 PF09105 Elongation factor SelB, winged helix Arnit_0988 PF09107 Elongation factor SelB, winged helix Arnit_0993 PF00589 Phage integrase family Arnit_0993 PF14659 Phage integrase, N-terminal SAM-like domain Arnit_1001 PF01026 TatD related DNase Arnit_1007 PF01934 Protein of unknown function DUF86 Arnit_1011 PF12833 Helix-turn-helix domain Arnit_1014 PF01268 Formate--tetrahydrofolate ligase Arnit_1015 PF12849 PBP superfamily domain Arnit_1016 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_1017 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_1018 PF00005 ABC transporter Arnit_1021 PF07722 Peptidase C26 Arnit_1023 PF00672 HAMP domain Arnit_1023 PF17200 Single Cache domain 2 Arnit_1023 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1024 PF13378 Enolase C-terminal domain-like Arnit_1025 PF00701 Dihydrodipicolinate synthetase family Arnit_1026 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Arnit_1026 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Arnit_1027 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Arnit_1027 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Arnit_1028 PF02595 Glycerate kinase family Arnit_1032 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Arnit_1032 PF08666 SAF domain Arnit_1034 PF00392 Bacterial regulatory proteins, gntR family Arnit_1034 PF07729 FCD domain Arnit_1035 PF02887 Pyruvate kinase, alpha/beta domain Arnit_1035 PF00224 Pyruvate kinase, barrel domain Arnit_1035 PF00391 PEP-utilising enzyme, mobile domain Arnit_1040 PF01258 Prokaryotic dksA/traR C4-type zinc finger Arnit_1041 PF00925 GTP cyclohydrolase II Arnit_1046 PF01926 50S ribosome-binding GTPase Arnit_1046 PF06071 Protein of unknown function (DUF933) Arnit_1047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1047 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1051 PF06865 Pyrimidine/purine nucleoside phosphorylase Arnit_1052 PF00072 Response regulator receiver domain Arnit_1052 PF00486 Transcriptional regulatory protein, C terminal Arnit_1053 PF00072 Response regulator receiver domain Arnit_1054 PF00072 Response regulator receiver domain Arnit_1054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1054 PF09308 LuxQ, periplasmic Arnit_1054 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1056 PF02653 Branched-chain amino acid transport system / permease component Arnit_1058 PF00005 ABC transporter Arnit_1058 PF12399 Branched-chain amino acid ATP-binding cassette transporter Arnit_1059 PF00005 ABC transporter Arnit_1060 PF01774 UreD urease accessory protein Arnit_1062 PF00753 Metallo-beta-lactamase superfamily Arnit_1062 PF16123 Hydroxyacylglutathione hydrolase C-terminus Arnit_1063 PF00005 ABC transporter Arnit_1064 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_1065 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_1066 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_1068 PF03561 Allantoicase repeat Arnit_1069 PF04115 Ureidoglycolate lyase Arnit_1070 PF00699 Urease beta subunit Arnit_1070 PF00547 Urease, gamma subunit Arnit_1071 PF00449 Urease alpha-subunit, N-terminal domain Arnit_1071 PF01979 Amidohydrolase family Arnit_1072 PF05194 UreE urease accessory protein, C-terminal domain Arnit_1074 PF02492 CobW/HypB/UreG, nucleotide-binding domain Arnit_1075 PF02472 Biopolymer transport protein ExbD/TolR Arnit_1076 PF01618 MotA/TolQ/ExbB proton channel family Arnit_1078 PF02769 AIR synthase related protein, C-terminal domain Arnit_1078 PF00586 AIR synthase related protein, N-terminal domain Arnit_1079 PF01142 tRNA pseudouridine synthase D (TruD) Arnit_1081 PF02203 Tar ligand binding domain homologue Arnit_1081 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1081 PF00672 HAMP domain Arnit_1082 PF07499 RuvA, C-terminal domain Arnit_1082 PF01330 RuvA N terminal domain Arnit_1083 PF01820 D-ala D-ala ligase N-terminus Arnit_1083 PF07478 D-ala D-ala ligase C-terminus Arnit_1085 PF08245 Mur ligase middle domain Arnit_1085 PF02875 Mur ligase family, glutamate ligase domain Arnit_1087 PF01230 HIT domain Arnit_1090 PF01266 FAD dependent oxidoreductase Arnit_1091 PF01966 HD domain Arnit_1094 PF00672 HAMP domain Arnit_1094 PF02203 Tar ligand binding domain homologue Arnit_1094 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1102 PF00338 Ribosomal protein S10p/S20e Arnit_1103 PF00297 Ribosomal protein L3 Arnit_1104 PF00573 Ribosomal protein L4/L1 family Arnit_1105 PF00276 Ribosomal protein L23 Arnit_1106 PF03947 Ribosomal Proteins L2, C-terminal domain Arnit_1106 PF00181 Ribosomal Proteins L2, RNA binding domain Arnit_1107 PF00203 Ribosomal protein S19 Arnit_1108 PF00237 Ribosomal protein L22p/L17e Arnit_1109 PF00189 Ribosomal protein S3, C-terminal domain Arnit_1109 PF07650 KH domain Arnit_1110 PF00252 Ribosomal protein L16p/L10e Arnit_1111 PF00831 Ribosomal L29 protein Arnit_1112 PF00366 Ribosomal protein S17 Arnit_1113 PF00238 Ribosomal protein L14p/L23e Arnit_1114 PF00467 KOW motif Arnit_1114 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Arnit_1115 PF00673 ribosomal L5P family C-terminus Arnit_1115 PF00281 Ribosomal protein L5 Arnit_1116 PF00253 Ribosomal protein S14p/S29e Arnit_1117 PF00410 Ribosomal protein S8 Arnit_1118 PF00347 Ribosomal protein L6 Arnit_1119 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Arnit_1120 PF00333 Ribosomal protein S5, N-terminal domain Arnit_1120 PF03719 Ribosomal protein S5, C-terminal domain Arnit_1121 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Arnit_1122 PF00344 SecY translocase Arnit_1123 PF00557 Metallopeptidase family M24 Arnit_1124 PF01176 Translation initiation factor 1A / IF-1 Arnit_1125 PF07694 5TMR of 5TMR-LYT Arnit_1125 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1129 PF02938 GAD domain Arnit_1129 PF00152 tRNA synthetases class II (D, K and N) Arnit_1129 PF01336 OB-fold nucleic acid binding domain Arnit_1131 PF08497 Radical SAM N-terminal Arnit_1131 PF04055 Radical SAM superfamily Arnit_1132 PF05191 Adenylate kinase, active site lid Arnit_1136 PF01168 Alanine racemase, N-terminal domain Arnit_1136 PF00842 Alanine racemase, C-terminal domain Arnit_1137 PF02151 UvrB/uvrC motif Arnit_1137 PF01541 GIY-YIG catalytic domain Arnit_1137 PF08459 UvrC Helix-hairpin-helix N-terminal Arnit_1140 PF00226 DnaJ domain Arnit_1140 PF01556 DnaJ C terminal domain Arnit_1140 PF16713 Enriched in aromatic and glycine Residues box Arnit_1141 PF00563 EAL domain Arnit_1141 PF08495 FIST N domain Arnit_1141 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1141 PF10442 FIST C domain Arnit_1142 PF00684 DnaJ central domain Arnit_1142 PF00226 DnaJ domain Arnit_1142 PF01556 DnaJ C terminal domain Arnit_1152 PF03372 Endonuclease/Exonuclease/phosphatase family Arnit_1153 PF00578 AhpC/TSA family Arnit_1157 PF01235 Sodium:alanine symporter family Arnit_1158 PF02743 Cache domain Arnit_1158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1158 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1159 PF00072 Response regulator receiver domain Arnit_1159 PF00486 Transcriptional regulatory protein, C terminal Arnit_1160 PF00072 Response regulator receiver domain Arnit_1161 PF00672 HAMP domain Arnit_1161 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Arnit_1161 PF00072 Response regulator receiver domain Arnit_1161 PF01627 Hpt domain Arnit_1161 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1162 PF00282 Pyridoxal-dependent decarboxylase conserved domain Arnit_1164 PF02525 Flavodoxin-like fold Arnit_1165 PF12833 Helix-turn-helix domain Arnit_1165 PF06719 AraC-type transcriptional regulator N-terminus Arnit_1167 PF00857 Isochorismatase family Arnit_1170 PF07690 Major Facilitator Superfamily Arnit_1171 PF07690 Major Facilitator Superfamily Arnit_1173 PF18665 Tetracyclin repressor-like, C-terminal domain Arnit_1173 PF00440 Bacterial regulatory proteins, tetR family Arnit_1176 PF00561 alpha/beta hydrolase fold Arnit_1177 PF16925 Tetracyclin repressor-like, C-terminal domain Arnit_1177 PF00440 Bacterial regulatory proteins, tetR family Arnit_1180 PF01161 Phosphatidylethanolamine-binding protein Arnit_1181 PF01209 ubiE/COQ5 methyltransferase family Arnit_1186 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1188 PF00072 Response regulator receiver domain Arnit_1188 PF01627 Hpt domain Arnit_1188 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1188 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_1188 PF00989 PAS fold Arnit_1189 PF00293 NUDIX domain Arnit_1189 PF13344 Haloacid dehalogenase-like hydrolase Arnit_1190 PF00171 Aldehyde dehydrogenase family Arnit_1191 PF01118 Semialdehyde dehydrogenase, NAD binding domain Arnit_1195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Arnit_1196 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Arnit_1196 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Arnit_1197 PF00892 EamA-like transporter family Arnit_1198 PF03466 LysR substrate binding domain Arnit_1198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Arnit_1199 PF03601 Conserved hypothetical protein 698 Arnit_1200 PF00206 Lyase Arnit_1200 PF10415 Fumarase C C-terminus Arnit_1202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1202 PF13426 PAS domain Arnit_1202 PF00072 Response regulator receiver domain Arnit_1203 PF00158 Sigma-54 interaction domain Arnit_1203 PF00072 Response regulator receiver domain Arnit_1203 PF02954 Bacterial regulatory protein, Fis family Arnit_1210 PF00672 HAMP domain Arnit_1210 PF02203 Tar ligand binding domain homologue Arnit_1210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1212 PF01266 FAD dependent oxidoreductase Arnit_1214 PF07687 Peptidase dimerisation domain Arnit_1214 PF01546 Peptidase family M20/M25/M40 Arnit_1215 PF05544 Proline racemase Arnit_1216 PF14765 Polyketide synthase dehydratase Arnit_1216 PF00107 Zinc-binding dehydrogenase Arnit_1216 PF08659 KR domain Arnit_1216 PF16197 Ketoacyl-synthetase C-terminal extension Arnit_1216 PF00698 Acyl transferase domain Arnit_1216 PF08240 Alcohol dehydrogenase GroES-like domain Arnit_1216 PF02801 Beta-ketoacyl synthase, C-terminal domain Arnit_1216 PF00109 Beta-ketoacyl synthase, N-terminal domain Arnit_1216 PF00550 Phosphopantetheine attachment site Arnit_1217 PF00582 Universal stress protein family Arnit_1218 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Arnit_1219 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Arnit_1220 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_1221 PF00557 Metallopeptidase family M24 Arnit_1221 PF01321 Creatinase/Prolidase N-terminal domain Arnit_1222 PF00171 Aldehyde dehydrogenase family Arnit_1223 PF00202 Aminotransferase class-III Arnit_1228 PF00005 ABC transporter Arnit_1229 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arnit_1230 PF00210 Ferritin-like domain Arnit_1231 PF02833 DHHA2 domain Arnit_1231 PF01368 DHH family Arnit_1232 PF01925 Sulfite exporter TauE/SafE Arnit_1233 PF12833 Helix-turn-helix domain Arnit_1234 PF00682 HMGL-like Arnit_1234 PF08502 LeuA allosteric (dimerisation) domain Arnit_1239 PF08713 DNA alkylation repair enzyme Arnit_1240 PF04073 Aminoacyl-tRNA editing domain Arnit_1241 PF05088 Bacterial NAD-glutamate dehydrogenase Arnit_1246 PF08495 FIST N domain Arnit_1246 PF00563 EAL domain Arnit_1246 PF10442 FIST C domain Arnit_1246 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1247 PF13460 NAD(P)H-binding Arnit_1247 PF11066 Protein of unknown function (DUF2867) Arnit_1248 PF04403 Paraquat-inducible protein A Arnit_1249 PF04403 Paraquat-inducible protein A Arnit_1250 PF02470 MlaD protein Arnit_1251 PF06628 Catalase-related immune-responsive Arnit_1251 PF00199 Catalase Arnit_1252 PF12796 Ankyrin repeats (3 copies) Arnit_1252 PF00023 Ankyrin repeat Arnit_1256 PF00072 Response regulator receiver domain Arnit_1256 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1257 PF00183 Hsp90 protein Arnit_1262 PF03466 LysR substrate binding domain Arnit_1262 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Arnit_1264 PF07715 TonB-dependent Receptor Plug Domain Arnit_1264 PF00593 TonB dependent receptor Arnit_1265 PF02311 AraC-like ligand binding domain Arnit_1265 PF12833 Helix-turn-helix domain Arnit_1267 PF13533 Biotin-lipoyl like Arnit_1268 PF07869 Protein of unknown function (DUF1656) Arnit_1271 PF01047 MarR family Arnit_1277 PF00768 D-alanyl-D-alanine carboxypeptidase Arnit_1277 PF07943 Penicillin-binding protein 5, C-terminal domain Arnit_1278 PF03641 Possible lysine decarboxylase Arnit_1279 PF03746 LamB/YcsF family Arnit_1281 PF07730 Histidine kinase Arnit_1281 PF17200 Single Cache domain 2 Arnit_1282 PF00486 Transcriptional regulatory protein, C terminal Arnit_1282 PF00072 Response regulator receiver domain Arnit_1283 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_1285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Arnit_1286 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_1288 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Arnit_1289 PF00795 Carbon-nitrogen hydrolase Arnit_1290 PF03737 Aldolase/RraA Arnit_1290 PF00180 Isocitrate/isopropylmalate dehydrogenase Arnit_1291 PF07286 Protein of unknown function (DUF1445) Arnit_1292 PF00072 Response regulator receiver domain Arnit_1292 PF04397 LytTr DNA-binding domain Arnit_1293 PF17200 Single Cache domain 2 Arnit_1293 PF00672 HAMP domain Arnit_1293 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1294 PF03746 LamB/YcsF family Arnit_1295 PF02682 Carboxyltransferase domain, subdomain C and D Arnit_1296 PF02626 Carboxyltransferase domain, subdomain A and B Arnit_1298 PF03880 DbpA RNA binding domain Arnit_1298 PF00270 DEAD/DEAH box helicase Arnit_1298 PF00271 Helicase conserved C-terminal domain Arnit_1299 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1302 PF01966 HD domain Arnit_1304 PF13638 PIN domain Arnit_1304 PF02562 PhoH-like protein Arnit_1305 PF03737 Aldolase/RraA Arnit_1306 PF00313 'Cold-shock' DNA-binding domain Arnit_1309 PF13462 Thioredoxin Arnit_1313 PF00596 Class II Aldolase and Adducin N-terminal domain Arnit_1314 PF03009 Glycerophosphoryl diester phosphodiesterase family Arnit_1316 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_1318 PF08402 TOBE domain Arnit_1318 PF00005 ABC transporter Arnit_1319 PF13416 Bacterial extracellular solute-binding protein Arnit_1320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Arnit_1320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Arnit_1322 PF00027 Cyclic nucleotide-binding domain Arnit_1322 PF00520 Ion transport protein Arnit_1326 PF13406 Transglycosylase SLT domain Arnit_1328 PF00578 AhpC/TSA family Arnit_1329 PF02600 Disulfide bond formation protein DsbB Arnit_1331 PF13426 PAS domain Arnit_1331 PF08448 PAS fold Arnit_1331 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1331 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1331 PF00072 Response regulator receiver domain Arnit_1332 PF00664 ABC transporter transmembrane region Arnit_1332 PF00005 ABC transporter Arnit_1334 PF13419 Haloacid dehalogenase-like hydrolase Arnit_1337 PF01551 Peptidase family M23 Arnit_1339 PF01709 Transcriptional regulator Arnit_1346 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Arnit_1346 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Arnit_1346 PF09317 Domain of unknown function (DUF1974) Arnit_1346 PF02770 Acyl-CoA dehydrogenase, middle domain Arnit_1347 PF00378 Enoyl-CoA hydratase/isomerase Arnit_1347 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Arnit_1347 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Arnit_1348 PF00108 Thiolase, N-terminal domain Arnit_1348 PF02803 Thiolase, C-terminal domain Arnit_1349 PF00501 AMP-binding enzyme Arnit_1350 PF00330 Aconitase family (aconitate hydratase) Arnit_1350 PF06434 Aconitate hydratase 2 N-terminus Arnit_1350 PF11791 Aconitate B N-terminal domain Arnit_1352 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_1354 PF13416 Bacterial extracellular solute-binding protein Arnit_1355 PF17912 MalK OB fold domain Arnit_1355 PF00005 ABC transporter Arnit_1356 PF08220 DeoR-like helix-turn-helix domain Arnit_1356 PF00455 DeoR C terminal sensor domain Arnit_1358 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Arnit_1358 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Arnit_1360 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Arnit_1360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Arnit_1360 PF10518 TAT (twin-arginine translocation) pathway signal sequence Arnit_1361 PF00374 Nickel-dependent hydrogenase Arnit_1363 PF01750 Hydrogenase maturation protease Arnit_1365 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Arnit_1365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Arnit_1365 PF10518 TAT (twin-arginine translocation) pathway signal sequence Arnit_1366 PF00374 Nickel-dependent hydrogenase Arnit_1367 PF01292 Prokaryotic cytochrome b561 Arnit_1368 PF01750 Hydrogenase maturation protease Arnit_1370 PF07503 HypF finger Arnit_1370 PF00708 Acylphosphatase Arnit_1370 PF17788 HypF Kae1-like domain Arnit_1370 PF01300 Telomere recombination Arnit_1371 PF02203 Tar ligand binding domain homologue Arnit_1371 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1371 PF00672 HAMP domain Arnit_1379 PF02492 CobW/HypB/UreG, nucleotide-binding domain Arnit_1380 PF01455 HupF/HypC family Arnit_1381 PF01924 Hydrogenase formation hypA family Arnit_1382 PF00958 GMP synthase C terminal domain Arnit_1382 PF00117 Glutamine amidotransferase class-I Arnit_1382 PF02540 NAD synthase Arnit_1383 PF00586 AIR synthase related protein, N-terminal domain Arnit_1383 PF02769 AIR synthase related protein, C-terminal domain Arnit_1384 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Arnit_1385 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1387 PF02653 Branched-chain amino acid transport system / permease component Arnit_1388 PF11862 Domain of unknown function (DUF3382) Arnit_1388 PF02653 Branched-chain amino acid transport system / permease component Arnit_1389 PF00005 ABC transporter Arnit_1389 PF12399 Branched-chain amino acid ATP-binding cassette transporter Arnit_1390 PF00005 ABC transporter Arnit_1396 PF00270 DEAD/DEAH box helicase Arnit_1396 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Arnit_1396 PF18074 Primosomal protein N C-terminal domain Arnit_1396 PF17764 3′ DNA-binding domain (3′BD) Arnit_1396 PF00271 Helicase conserved C-terminal domain Arnit_1397 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle Arnit_1397 PF14602 Hexapeptide repeat of succinyl-transferase Arnit_1398 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1401 PF00005 ABC transporter Arnit_1402 PF02390 Putative methyltransferase Arnit_1404 PF01479 S4 domain Arnit_1404 PF00849 RNA pseudouridylate synthase Arnit_1405 PF01098 Cell cycle protein Arnit_1406 PF00491 Arginase family Arnit_1410 PF00202 Aminotransferase class-III Arnit_1411 PF06865 Pyrimidine/purine nucleoside phosphorylase Arnit_1415 PF04539 Sigma-70 region 3 Arnit_1415 PF04542 Sigma-70 region 2 Arnit_1415 PF04545 Sigma-70, region 4 Arnit_1415 PF00140 Sigma-70 factor, region 1.2 Arnit_1416 PF00694 Aconitase C-terminal domain Arnit_1417 PF00180 Isocitrate/isopropylmalate dehydrogenase Arnit_1419 PF00005 ABC transporter Arnit_1420 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_1421 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_1422 PF01546 Peptidase family M20/M25/M40 Arnit_1425 PF00416 Ribosomal protein S13/S18 Arnit_1426 PF00411 Ribosomal protein S11 Arnit_1427 PF00163 Ribosomal protein S4/S9 N-terminal domain Arnit_1427 PF01479 S4 domain Arnit_1428 PF01000 RNA polymerase Rpb3/RpoA insert domain Arnit_1428 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Arnit_1428 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Arnit_1429 PF01196 Ribosomal protein L17 Arnit_1430 PF01425 Amidase Arnit_1431 PF00478 IMP dehydrogenase / GMP reductase domain Arnit_1431 PF00571 CBS domain Arnit_1434 PF13443 Cro/C1-type HTH DNA-binding domain Arnit_1435 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Arnit_1438 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Arnit_1441 PF01810 LysE type translocator Arnit_1444 PF01541 GIY-YIG catalytic domain Arnit_1445 PF00258 Flavodoxin Arnit_1446 PF01883 Iron-sulfur cluster assembly protein Arnit_1448 PF09335 SNARE associated Golgi protein Arnit_1452 PF00581 Rhodanese-like domain Arnit_1453 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_1457 PF03641 Possible lysine decarboxylase Arnit_1458 PF00962 Adenosine/AMP deaminase Arnit_1459 PF02574 Homocysteine S-methyltransferase Arnit_1461 PF01810 LysE type translocator Arnit_1467 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_1468 PF12848 ABC transporter Arnit_1468 PF00005 ABC transporter Arnit_1468 PF16326 ABC transporter C-terminal domain Arnit_1471 PF00561 alpha/beta hydrolase fold Arnit_1473 PF04002 RadC-like JAB domain Arnit_1476 PF02384 N-6 DNA Methylase Arnit_1476 PF12161 HsdM N-terminal domain Arnit_1478 PF04851 Type III restriction enzyme, res subunit Arnit_1478 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) Arnit_1478 PF00271 Helicase conserved C-terminal domain Arnit_1478 PF08463 EcoEI R protein C-terminal Arnit_1480 PF00899 ThiF family Arnit_1481 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Arnit_1481 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Arnit_1481 PF02142 MGS-like domain Arnit_1498 PF00664 ABC transporter transmembrane region Arnit_1498 PF03412 Peptidase C39 family Arnit_1498 PF00005 ABC transporter Arnit_1500 PF00589 Phage integrase family Arnit_1500 PF02899 Phage integrase, N-terminal SAM-like domain Arnit_1506 PF00072 Response regulator receiver domain Arnit_1512 PF00529 HlyD membrane-fusion protein of T1SS Arnit_1513 PF00005 ABC transporter Arnit_1513 PF00664 ABC transporter transmembrane region Arnit_1513 PF03412 Peptidase C39 family Arnit_1516 PF00072 Response regulator receiver domain Arnit_1516 PF00486 Transcriptional regulatory protein, C terminal Arnit_1517 PF17287 POTRA domain Arnit_1517 PF08479 POTRA domain, ShlB-type Arnit_1517 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Arnit_1518 PF04829 Pre-toxin domain with VENN motif Arnit_1518 PF05594 Haemagluttinin repeat Arnit_1518 PF15526 Novel toxin 21 Arnit_1518 PF13332 Hemagglutinin repeat Arnit_1518 PF05860 haemagglutination activity domain Arnit_1520 PF00296 Luciferase-like monooxygenase Arnit_1522 PF03788 LrgA family Arnit_1523 PF04172 LrgB-like family Arnit_1525 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Arnit_1537 PF05971 RNA methyltransferase Arnit_1538 PF00132 Bacterial transferase hexapeptide (six repeats) Arnit_1538 PF12804 MobA-like NTP transferase domain Arnit_1540 PF00034 Cytochrome c Arnit_1540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Arnit_1540 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Arnit_1541 PF01799 [2Fe-2S] binding domain Arnit_1541 PF00111 2Fe-2S iron-sulfur cluster binding domain Arnit_1542 PF00440 Bacterial regulatory proteins, tetR family Arnit_1551 PF01761 3-dehydroquinate synthase Arnit_1553 PF00919 Uncharacterized protein family UPF0004 Arnit_1553 PF04055 Radical SAM superfamily Arnit_1554 PF01434 Peptidase family M41 Arnit_1554 PF17862 AAA+ lid domain Arnit_1554 PF00004 ATPase family associated with various cellular activities (AAA) Arnit_1556 PF00994 Probable molybdopterin binding domain Arnit_1557 PF00939 Sodium:sulfate symporter transmembrane region Arnit_1559 PF00488 MutS domain V Arnit_1559 PF01713 Smr domain Arnit_1560 PF00924 Mechanosensitive ion channel Arnit_1560 PF05552 Conserved TM helix Arnit_1562 PF07687 Peptidase dimerisation domain Arnit_1562 PF01546 Peptidase family M20/M25/M40 Arnit_1568 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Arnit_1568 PF00056 lactate/malate dehydrogenase, NAD binding domain Arnit_1571 PF00072 Response regulator receiver domain Arnit_1572 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Arnit_1573 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1573 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1573 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_1575 PF00384 Molybdopterin oxidoreductase Arnit_1575 PF01568 Molydopterin dinucleotide binding domain Arnit_1575 PF18364 Molybdopterin oxidoreductase N-terminal domain Arnit_1577 PF03600 Citrate transporter Arnit_1578 PF13536 Putative multidrug resistance efflux transporter Arnit_1579 PF01177 Asp/Glu/Hydantoin racemase Arnit_1580 PF03473 MOSC domain Arnit_1583 PF01638 HxlR-like helix-turn-helix Arnit_1585 PF02525 Flavodoxin-like fold Arnit_1586 PF00881 Nitroreductase family Arnit_1590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Arnit_1593 PF00465 Iron-containing alcohol dehydrogenase Arnit_1594 PF00881 Nitroreductase family Arnit_1595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1595 PF00672 HAMP domain Arnit_1595 PF02203 Tar ligand binding domain homologue Arnit_1598 PF02926 THUMP domain Arnit_1598 PF02568 Thiamine biosynthesis protein (ThiI) Arnit_1600 PF00005 ABC transporter Arnit_1600 PF12848 ABC transporter Arnit_1601 PF00563 EAL domain Arnit_1601 PF01590 GAF domain Arnit_1601 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1601 PF00360 Phytochrome region Arnit_1603 PF03061 Thioesterase superfamily Arnit_1604 PF00533 BRCA1 C Terminus (BRCT) domain Arnit_1604 PF12826 Helix-hairpin-helix motif Arnit_1604 PF03120 NAD-dependent DNA ligase OB-fold domain Arnit_1604 PF01653 NAD-dependent DNA ligase adenylation domain Arnit_1605 PF08241 Methyltransferase domain Arnit_1608 PF00072 Response regulator receiver domain Arnit_1608 PF00486 Transcriptional regulatory protein, C terminal Arnit_1609 PF00672 HAMP domain Arnit_1609 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1609 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1611 PF01970 Tripartite tricarboxylate transporter TctA family Arnit_1615 PF07687 Peptidase dimerisation domain Arnit_1615 PF01546 Peptidase family M20/M25/M40 Arnit_1616 PF11849 Domain of unknown function (DUF3369) Arnit_1617 PF05140 ResB-like family Arnit_1617 PF01578 Cytochrome C assembly protein Arnit_1618 PF08003 Protein of unknown function (DUF1698) Arnit_1619 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1620 PF00753 Metallo-beta-lactamase superfamily Arnit_1621 PF04305 Protein of unknown function (DUF455) Arnit_1623 PF12792 CSS motif domain associated with EAL Arnit_1623 PF00563 EAL domain Arnit_1624 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Arnit_1624 PF01243 Pyridoxamine 5'-phosphate oxidase Arnit_1632 PF00106 short chain dehydrogenase Arnit_1633 PF00291 Pyridoxal-phosphate dependent enzyme Arnit_1634 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1634 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1635 PF01556 DnaJ C terminal domain Arnit_1635 PF00684 DnaJ central domain Arnit_1635 PF00226 DnaJ domain Arnit_1636 PF02132 RecR protein Arnit_1636 PF13662 Toprim domain Arnit_1638 PF18698 Histidine kinase sensor domain Arnit_1638 PF00672 HAMP domain Arnit_1638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1638 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1640 PF03591 AzlC protein Arnit_1641 PF05437 Branched-chain amino acid transport protein (AzlD) Arnit_1645 PF00132 Bacterial transferase hexapeptide (six repeats) Arnit_1647 PF10531 SLBB domain Arnit_1648 PF08443 RimK-like ATP-grasp domain Arnit_1648 PF18030 RimK PreATP-grasp domain Arnit_1650 PF00764 Arginosuccinate synthase Arnit_1652 PF02885 Glycosyl transferase family, helical bundle domain Arnit_1652 PF00591 Glycosyl transferase family, a/b domain Arnit_1654 PF00005 ABC transporter Arnit_1654 PF12399 Branched-chain amino acid ATP-binding cassette transporter Arnit_1655 PF00196 Bacterial regulatory proteins, luxR family Arnit_1655 PF00072 Response regulator receiver domain Arnit_1656 PF02348 Cytidylyltransferase Arnit_1657 PF00072 Response regulator receiver domain Arnit_1657 PF13426 PAS domain Arnit_1657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1658 PF01612 3'-5' exonuclease Arnit_1658 PF00476 DNA polymerase family A Arnit_1658 PF01367 5'-3' exonuclease, C-terminal SAM fold Arnit_1658 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Arnit_1662 PF00072 Response regulator receiver domain Arnit_1662 PF00196 Bacterial regulatory proteins, luxR family Arnit_1663 PF01790 Prolipoprotein diacylglyceryl transferase Arnit_1664 PF02754 Cysteine-rich domain Arnit_1665 PF06969 HemN C-terminal domain Arnit_1665 PF04055 Radical SAM superfamily Arnit_1666 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Arnit_1666 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Arnit_1670 PF00072 Response regulator receiver domain Arnit_1670 PF00486 Transcriptional regulatory protein, C terminal Arnit_1671 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1671 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1673 PF00490 Delta-aminolevulinic acid dehydratase Arnit_1674 PF00925 GTP cyclohydrolase II Arnit_1675 PF02527 rRNA small subunit methyltransferase G Arnit_1679 PF02092 Glycyl-tRNA synthetase beta subunit Arnit_1709 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Arnit_1709 PF00925 GTP cyclohydrolase II Arnit_1711 PF01293 Phosphoenolpyruvate carboxykinase Arnit_1712 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Arnit_1713 PF00364 Biotin-requiring enzyme Arnit_1713 PF02436 Conserved carboxylase domain Arnit_1713 PF00682 HMGL-like Arnit_1718 PF00133 tRNA synthetases class I (I, L, M and V) Arnit_1718 PF09334 tRNA synthetases class I (M) Arnit_1718 PF01588 Putative tRNA binding domain Arnit_1720 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Arnit_1724 PF02325 YGGT family Arnit_1725 PF00749 tRNA synthetases class I (E and Q), catalytic domain Arnit_1726 PF05193 Peptidase M16 inactive domain Arnit_1727 PF04055 Radical SAM superfamily Arnit_1728 PF07244 Surface antigen variable number repeat Arnit_1728 PF01103 Surface antigen Arnit_1729 PF01842 ACT domain Arnit_1729 PF02153 Prephenate dehydrogenase Arnit_1730 PF00809 Pterin binding enzyme Arnit_1733 PF00696 Amino acid kinase family Arnit_1733 PF01842 ACT domain Arnit_1733 PF13840 ACT domain Arnit_1734 PF00293 NUDIX domain Arnit_1735 PF06969 HemN C-terminal domain Arnit_1735 PF04055 Radical SAM superfamily Arnit_1736 PF13847 Methyltransferase domain Arnit_1736 PF17827 PrmC N-terminal domain Arnit_1737 PF01432 Peptidase family M3 Arnit_1740 PF18644 Phage integrase SAM-like domain Arnit_1740 PF00589 Phage integrase family Arnit_1747 PF00004 ATPase family associated with various cellular activities (AAA) Arnit_1747 PF10431 C-terminal, D2-small domain, of ClpB protein Arnit_1747 PF07724 AAA domain (Cdc48 subfamily) Arnit_1747 PF17871 AAA lid domain Arnit_1755 PF00069 Protein kinase domain Arnit_1755 PF03793 PASTA domain Arnit_1756 PF05638 Type VI secretion system effector, Hcp Arnit_1757 PF04717 Type VI secretion system, phage-baseplate injector Arnit_1757 PF16671 Actin cross-linking domain Arnit_1760 PF04717 Type VI secretion system, phage-baseplate injector Arnit_1760 PF16671 Actin cross-linking domain Arnit_1767 PF00072 Response regulator receiver domain Arnit_1767 PF01339 CheB methylesterase Arnit_1768 PF03975 CheD chemotactic sensory transduction Arnit_1769 PF03705 CheR methyltransferase, all-alpha domain Arnit_1769 PF01739 CheR methyltransferase, SAM binding domain Arnit_1770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1770 PF01627 Hpt domain Arnit_1770 PF09078 CheY binding Arnit_1770 PF01584 CheW-like domain Arnit_1770 PF02895 Signal transducing histidine kinase, homodimeric domain Arnit_1771 PF00072 Response regulator receiver domain Arnit_1772 PF00575 S1 RNA binding domain Arnit_1772 PF03725 3' exoribonuclease family, domain 2 Arnit_1772 PF01138 3' exoribonuclease family, domain 1 Arnit_1772 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Arnit_1772 PF00013 KH domain Arnit_1774 PF04453 LPS transport system D Arnit_1774 PF03968 OstA-like protein Arnit_1776 PF02844 Phosphoribosylglycinamide synthetase, N domain Arnit_1776 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Arnit_1776 PF02843 Phosphoribosylglycinamide synthetase, C domain Arnit_1778 PF00916 Sulfate permease family Arnit_1778 PF01740 STAS domain Arnit_1779 PF01926 50S ribosome-binding GTPase Arnit_1779 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Arnit_1780 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Arnit_1780 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Arnit_1781 PF01580 FtsK/SpoIIIE family Arnit_1781 PF09397 Ftsk gamma domain Arnit_1781 PF17854 FtsK alpha domain Arnit_1782 PF00132 Bacterial transferase hexapeptide (six repeats) Arnit_1782 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Arnit_1783 PF10369 Small subunit of acetolactate synthase Arnit_1784 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Arnit_1784 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Arnit_1784 PF00205 Thiamine pyrophosphate enzyme, central domain Arnit_1786 PF02541 Ppx/GppA phosphatase family Arnit_1787 PF01066 CDP-alcohol phosphatidyltransferase Arnit_1788 PF01590 GAF domain Arnit_1788 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1788 PF00360 Phytochrome region Arnit_1788 PF00563 EAL domain Arnit_1790 PF00085 Thioredoxin Arnit_1791 PF01171 PP-loop family Arnit_1793 PF02203 Tar ligand binding domain homologue Arnit_1793 PF00672 HAMP domain Arnit_1793 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1795 PF00171 Aldehyde dehydrogenase family Arnit_1796 PF00005 ABC transporter Arnit_1797 PF12399 Branched-chain amino acid ATP-binding cassette transporter Arnit_1797 PF00005 ABC transporter Arnit_1798 PF02653 Branched-chain amino acid transport system / permease component Arnit_1798 PF11862 Domain of unknown function (DUF3382) Arnit_1799 PF02653 Branched-chain amino acid transport system / permease component Arnit_1805 PF00072 Response regulator receiver domain Arnit_1818 PF00174 Oxidoreductase molybdopterin binding domain Arnit_1819 PF03453 MoeA N-terminal region (domain I and II) Arnit_1819 PF03454 MoeA C-terminal region (domain IV) Arnit_1819 PF00994 Probable molybdopterin binding domain Arnit_1823 PF02646 RmuC family Arnit_1824 PF16491 CAAX prenyl protease N-terminal, five membrane helices Arnit_1824 PF01435 Peptidase family M48 Arnit_1826 PF03061 Thioesterase superfamily Arnit_1829 PF00999 Sodium/hydrogen exchanger family Arnit_1829 PF02254 TrkA-N domain Arnit_1830 PF00465 Iron-containing alcohol dehydrogenase Arnit_1832 PF00672 HAMP domain Arnit_1832 PF02203 Tar ligand binding domain homologue Arnit_1832 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1833 PF00248 Aldo/keto reductase family Arnit_1836 PF02654 Cobalamin-5-phosphate synthase Arnit_1837 PF07685 CobB/CobQ-like glutamine amidotransferase domain Arnit_1837 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Arnit_1839 PF01914 MarC family integral membrane protein Arnit_1840 PF02277 Phosphoribosyltransferase Arnit_1841 PF01636 Phosphotransferase enzyme family Arnit_1842 PF00881 Nitroreductase family Arnit_1843 PF00155 Aminotransferase class I and II Arnit_1844 PF03186 CobD/Cbib protein Arnit_1845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Arnit_1845 PF07685 CobB/CobQ-like glutamine amidotransferase domain Arnit_1846 PF01032 FecCD transport family Arnit_1847 PF00005 ABC transporter Arnit_1849 PF00593 TonB dependent receptor Arnit_1849 PF07715 TonB-dependent Receptor Plug Domain Arnit_1852 PF13419 Haloacid dehalogenase-like hydrolase Arnit_1853 PF01479 S4 domain Arnit_1853 PF00849 RNA pseudouridylate synthase Arnit_1855 PF02472 Biopolymer transport protein ExbD/TolR Arnit_1856 PF01618 MotA/TolQ/ExbB proton channel family Arnit_1857 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1857 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1857 PF00672 HAMP domain Arnit_1857 PF13426 PAS domain Arnit_1858 PF00072 Response regulator receiver domain Arnit_1858 PF00486 Transcriptional regulatory protein, C terminal Arnit_1861 PF00588 SpoU rRNA Methylase family Arnit_1862 PF01842 ACT domain Arnit_1862 PF00551 Formyl transferase Arnit_1863 PF01515 Phosphate acetyl/butaryl transferase Arnit_1863 PF00390 Malic enzyme, N-terminal domain Arnit_1863 PF03949 Malic enzyme, NAD binding domain Arnit_1865 PF08501 Shikimate dehydrogenase substrate binding domain Arnit_1870 PF03738 Glutathionylspermidine synthase preATP-grasp Arnit_1871 PF17200 Single Cache domain 2 Arnit_1871 PF00672 HAMP domain Arnit_1871 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1873 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Arnit_1874 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Arnit_1875 PF02540 NAD synthase Arnit_1879 PF00226 DnaJ domain Arnit_1879 PF05099 Tellurite resistance protein TerB Arnit_1880 PF02416 mttA/Hcf106 family Arnit_1881 PF00902 Sec-independent protein translocase protein (TatC) Arnit_1882 PF02547 Queuosine biosynthesis protein Arnit_1884 PF00072 Response regulator receiver domain Arnit_1884 PF12833 Helix-turn-helix domain Arnit_1885 PF02743 Cache domain Arnit_1885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1885 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1887 PF00209 Sodium:neurotransmitter symporter family Arnit_1889 PF03781 Sulfatase-modifying factor enzyme 1 Arnit_1889 PF12867 DinB superfamily Arnit_1891 PF03737 Aldolase/RraA Arnit_1892 PF01212 Beta-eliminating lyase Arnit_1895 PF06368 Methylaspartate mutase E chain (MutE) Arnit_1896 PF13941 MutL protein Arnit_1897 PF00501 AMP-binding enzyme Arnit_1897 PF13193 AMP-binding enzyme C-terminal domain Arnit_1898 PF00034 Cytochrome c Arnit_1900 PF00563 EAL domain Arnit_1900 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1900 PF10442 FIST C domain Arnit_1900 PF08495 FIST N domain Arnit_1901 PF00990 Diguanylate cyclase, GGDEF domain Arnit_1903 PF00873 AcrB/AcrD/AcrF family Arnit_1905 PF01795 MraW methylase family Arnit_1907 PF00216 Bacterial DNA-binding protein Arnit_1909 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Arnit_1911 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_1911 PF00512 His Kinase A (phospho-acceptor) domain Arnit_1911 PF07689 KaiB domain Arnit_1912 PF00072 Response regulator receiver domain Arnit_1912 PF00486 Transcriptional regulatory protein, C terminal Arnit_1916 PF03548 Outer membrane lipoprotein carrier protein LolA Arnit_1917 PF00271 Helicase conserved C-terminal domain Arnit_1917 PF07516 SecA Wing and Scaffold domain Arnit_1917 PF01043 SecA preprotein cross-linking domain Arnit_1917 PF07517 SecA DEAD-like domain Arnit_1917 PF02810 SEC-C motif Arnit_1918 PF12704 MacB-like periplasmic core domain Arnit_1918 PF02687 FtsX-like permease family Arnit_1921 PF03971 Monomeric isocitrate dehydrogenase Arnit_1922 PF00056 lactate/malate dehydrogenase, NAD binding domain Arnit_1922 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Arnit_1925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Arnit_1925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Arnit_1927 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Arnit_1927 PF01266 FAD dependent oxidoreductase Arnit_1929 PF00226 DnaJ domain Arnit_1929 PF01556 DnaJ C terminal domain Arnit_1930 PF13411 MerR HTH family regulatory protein Arnit_1931 PF00091 Tubulin/FtsZ family, GTPase domain Arnit_1931 PF12327 FtsZ family, C-terminal domain Arnit_1932 PF02491 SHS2 domain inserted in FTSA Arnit_1934 PF14490 Helix-hairpin-helix containing domain Arnit_1934 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Arnit_1934 PF13538 UvrD-like helicase C-terminal domain Arnit_1936 PF03960 ArsC family Arnit_1938 PF01312 FlhB HrpN YscU SpaS Family Arnit_1940 PF03717 Penicillin-binding Protein dimerisation domain Arnit_1940 PF00905 Penicillin binding protein transpeptidase domain Arnit_1941 PF02203 Tar ligand binding domain homologue Arnit_1941 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1941 PF00672 HAMP domain Arnit_1942 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1942 PF08447 PAS fold Arnit_1943 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_1944 PF00813 FliP family Arnit_1945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1945 PF17200 Single Cache domain 2 Arnit_1945 PF00672 HAMP domain Arnit_1945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_1945 PF00672 HAMP domain Arnit_1945 PF17200 Single Cache domain 2 Arnit_1951 PF01926 50S ribosome-binding GTPase Arnit_1955 PF00475 Imidazoleglycerol-phosphate dehydratase Arnit_1956 PF05036 Sporulation related domain Arnit_1956 PF03330 Lytic transglycolase Arnit_1957 PF01464 Transglycosylase SLT domain Arnit_1957 PF01476 LysM domain Arnit_1958 PF01026 TatD related DNase Arnit_1960 PF10431 C-terminal, D2-small domain, of ClpB protein Arnit_1960 PF07724 AAA domain (Cdc48 subfamily) Arnit_1961 PF00227 Proteasome subunit Arnit_1962 PF01281 Ribosomal protein L9, N-terminal domain Arnit_1962 PF03948 Ribosomal protein L9, C-terminal domain Arnit_1964 PF02441 Flavoprotein Arnit_1965 PF01467 Cytidylyltransferase-like Arnit_1966 PF02223 Thymidylate kinase Arnit_1967 PF13393 Histidyl-tRNA synthetase Arnit_1967 PF03129 Anticodon binding domain Arnit_1968 PF17810 Arginine decarboxylase helical bundle domain Arnit_1968 PF17944 Arginine decarboxylase C-terminal helical extension Arnit_1968 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Arnit_1969 PF06426 Serine acetyltransferase, N-terminal Arnit_1969 PF00132 Bacterial transferase hexapeptide (six repeats) Arnit_1971 PF00271 Helicase conserved C-terminal domain Arnit_1971 PF00270 DEAD/DEAH box helicase Arnit_1972 PF00330 Aconitase family (aconitate hydratase) Arnit_1972 PF00694 Aconitase C-terminal domain Arnit_1973 PF00924 Mechanosensitive ion channel Arnit_1974 PF00005 ABC transporter Arnit_1974 PF17755 UvrA DNA-binding domain Arnit_1974 PF17760 UvrA interaction domain Arnit_1977 PF03471 Transporter associated domain Arnit_1977 PF01595 Cyclin M transmembrane N-terminal domain Arnit_1977 PF00571 CBS domain Arnit_1981 PF07690 Major Facilitator Superfamily Arnit_1984 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Arnit_1987 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Arnit_1987 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Arnit_1988 PF00375 Sodium:dicarboxylate symporter family Arnit_1989 PF00892 EamA-like transporter family Arnit_1990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Arnit_1990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Arnit_1992 PF13520 Amino acid permease Arnit_1994 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Arnit_1994 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_1994 PF00403 Heavy-metal-associated domain Arnit_1995 PF01914 MarC family integral membrane protein Arnit_1998 PF01810 LysE type translocator Arnit_2001 PF00085 Thioredoxin Arnit_2002 PF10417 C-terminal domain of 1-Cys peroxiredoxin Arnit_2002 PF00578 AhpC/TSA family Arnit_2004 PF00384 Molybdopterin oxidoreductase Arnit_2004 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_2004 PF01568 Molydopterin dinucleotide binding domain Arnit_2006 PF13247 4Fe-4S dicluster domain Arnit_2007 PF08448 PAS fold Arnit_2007 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2007 PF00072 Response regulator receiver domain Arnit_2007 PF13188 PAS domain Arnit_2008 PF00486 Transcriptional regulatory protein, C terminal Arnit_2008 PF00072 Response regulator receiver domain Arnit_2009 PF00313 'Cold-shock' DNA-binding domain Arnit_2014 PF01966 HD domain Arnit_2014 PF00072 Response regulator receiver domain Arnit_2020 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2021 PF00155 Aminotransferase class I and II Arnit_2021 PF00392 Bacterial regulatory proteins, gntR family Arnit_2024 PF00849 RNA pseudouridylate synthase Arnit_2024 PF01479 S4 domain Arnit_2027 PF01925 Sulfite exporter TauE/SafE Arnit_2038 PF00072 Response regulator receiver domain Arnit_2038 PF00486 Transcriptional regulatory protein, C terminal Arnit_2039 PF16736 Single Cache-like Arnit_2039 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2039 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2039 PF00989 PAS fold Arnit_2040 PF17200 Single Cache domain 2 Arnit_2040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2040 PF00672 HAMP domain Arnit_2060 PF00117 Glutamine amidotransferase class-I Arnit_2060 PF00958 GMP synthase C terminal domain Arnit_2060 PF02540 NAD synthase Arnit_2062 PF03600 Citrate transporter Arnit_2063 PF00890 FAD binding domain Arnit_2063 PF02910 Fumarate reductase flavoprotein C-term Arnit_2066 PF00155 Aminotransferase class I and II Arnit_2067 PF01545 Cation efflux family Arnit_2067 PF16916 Dimerisation domain of Zinc Transporter Arnit_2068 PF00211 Adenylate and Guanylate cyclase catalytic domain Arnit_2071 PF00005 ABC transporter Arnit_2071 PF12848 ABC transporter Arnit_2071 PF16326 ABC transporter C-terminal domain Arnit_2072 PF09424 Yqey-like protein Arnit_2073 PF00990 Diguanylate cyclase, GGDEF domain Arnit_2081 PF12282 Signal transduction histidine kinase Arnit_2081 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2081 PF07568 Histidine kinase Arnit_2083 PF00486 Transcriptional regulatory protein, C terminal Arnit_2083 PF00072 Response regulator receiver domain Arnit_2085 PF00106 short chain dehydrogenase Arnit_2086 PF03553 Na+/H+ antiporter family Arnit_2087 PF02659 Putative manganese efflux pump Arnit_2088 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_2088 PF12911 N-terminal TM domain of oligopeptide transport permease C Arnit_2092 PF12072 Domain of unknown function (DUF3552) Arnit_2092 PF01966 HD domain Arnit_2092 PF00013 KH domain Arnit_2093 PF01812 5-formyltetrahydrofolate cyclo-ligase family Arnit_2094 PF00578 AhpC/TSA family Arnit_2095 PF00448 SRP54-type protein, GTPase domain Arnit_2097 PF00072 Response regulator receiver domain Arnit_2097 PF00486 Transcriptional regulatory protein, C terminal Arnit_2098 PF13426 PAS domain Arnit_2098 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2098 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2098 PF00672 HAMP domain Arnit_2099 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Arnit_2103 PF00075 RNase H Arnit_2105 PF00672 HAMP domain Arnit_2105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2105 PF02203 Tar ligand binding domain homologue Arnit_2106 PF01263 Aldose 1-epimerase Arnit_2107 PF14437 MafB19-like deaminase Arnit_2112 PF01810 LysE type translocator Arnit_2114 PF18073 Rubredoxin metal binding domain Arnit_2116 PF02130 Uncharacterized protein family UPF0054 Arnit_2117 PF01699 Sodium/calcium exchanger protein Arnit_2119 PF00210 Ferritin-like domain Arnit_2120 PF02915 Rubrerythrin Arnit_2122 PF03023 Lipid II flippase MurJ Arnit_2123 PF00005 ABC transporter Arnit_2123 PF00664 ABC transporter transmembrane region Arnit_2124 PF01180 Dihydroorotate dehydrogenase Arnit_2127 PF00701 Dihydrodipicolinate synthetase family Arnit_2129 PF01066 CDP-alcohol phosphatidyltransferase Arnit_2130 PF17820 PDZ domain Arnit_2130 PF02163 Peptidase family M50 Arnit_2131 PF01168 Alanine racemase, N-terminal domain Arnit_2135 PF00218 Indole-3-glycerol phosphate synthase Arnit_2137 PF03692 Putative zinc- or iron-chelating domain Arnit_2138 PF05175 Methyltransferase small domain Arnit_2140 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Arnit_2140 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Arnit_2140 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Arnit_2141 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Arnit_2141 PF00205 Thiamine pyrophosphate enzyme, central domain Arnit_2141 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Arnit_2158 PF14579 Helix-hairpin-helix motif Arnit_2158 PF11490 DNA polymerase III polC-type N-terminus II Arnit_2158 PF02811 PHP domain Arnit_2158 PF00929 Exonuclease Arnit_2158 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Arnit_2158 PF14480 DNA polymerase III polC-type N-terminus I Arnit_2158 PF07733 Bacterial DNA polymerase III alpha NTPase domain Arnit_2159 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Arnit_2160 PF00834 Ribulose-phosphate 3 epimerase family Arnit_2161 PF02253 Phospholipase A1 Arnit_2163 PF09308 LuxQ, periplasmic Arnit_2163 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2163 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2163 PF00072 Response regulator receiver domain Arnit_2164 PF00072 Response regulator receiver domain Arnit_2164 PF00486 Transcriptional regulatory protein, C terminal Arnit_2168 PF00990 Diguanylate cyclase, GGDEF domain Arnit_2170 PF00293 NUDIX domain Arnit_2172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2172 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2173 PF00072 Response regulator receiver domain Arnit_2173 PF00486 Transcriptional regulatory protein, C terminal Arnit_2174 PF04461 Protein of unknown function (DUF520) Arnit_2175 PF04241 Protein of unknown function (DUF423) Arnit_2177 PF00156 Phosphoribosyl transferase domain Arnit_2178 PF00860 Permease family Arnit_2181 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Arnit_2182 PF00392 Bacterial regulatory proteins, gntR family Arnit_2182 PF00155 Aminotransferase class I and II Arnit_2183 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_2183 PF00384 Molybdopterin oxidoreductase Arnit_2183 PF01568 Molydopterin dinucleotide binding domain Arnit_2184 PF01965 DJ-1/PfpI family Arnit_2184 PF12833 Helix-turn-helix domain Arnit_2186 PF03848 Tellurite resistance protein TehB Arnit_2187 PF02525 Flavodoxin-like fold Arnit_2188 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Arnit_2189 PF11761 Cobalamin biosynthesis central region Arnit_2189 PF11760 Cobalamin synthesis G N-terminal Arnit_2189 PF01890 Cobalamin synthesis G C-terminus Arnit_2190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Arnit_2191 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Arnit_2192 PF01888 CbiD Arnit_2196 PF06180 Cobalt chelatase (CbiK) Arnit_2199 PF00149 Calcineurin-like phosphoesterase Arnit_2200 PF00005 ABC transporter Arnit_2200 PF08402 TOBE domain Arnit_2203 PF01547 Bacterial extracellular solute-binding protein Arnit_2204 PF00356 Bacterial regulatory proteins, lacI family Arnit_2205 PF00990 Diguanylate cyclase, GGDEF domain Arnit_2205 PF00563 EAL domain Arnit_2205 PF00360 Phytochrome region Arnit_2205 PF01590 GAF domain Arnit_2206 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Arnit_2206 PF12833 Helix-turn-helix domain Arnit_2206 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Arnit_2206 PF02805 Metal binding domain of Ada Arnit_2208 PF12833 Helix-turn-helix domain Arnit_2209 PF00501 AMP-binding enzyme Arnit_2210 PF14765 Polyketide synthase dehydratase Arnit_2210 PF00109 Beta-ketoacyl synthase, N-terminal domain Arnit_2210 PF00550 Phosphopantetheine attachment site Arnit_2210 PF16197 Ketoacyl-synthetase C-terminal extension Arnit_2210 PF02801 Beta-ketoacyl synthase, C-terminal domain Arnit_2210 PF08659 KR domain Arnit_2211 PF16197 Ketoacyl-synthetase C-terminal extension Arnit_2211 PF00550 Phosphopantetheine attachment site Arnit_2211 PF02801 Beta-ketoacyl synthase, C-terminal domain Arnit_2211 PF00698 Acyl transferase domain Arnit_2211 PF00109 Beta-ketoacyl synthase, N-terminal domain Arnit_2211 PF00668 Condensation domain Arnit_2212 PF00550 Phosphopantetheine attachment site Arnit_2212 PF00501 AMP-binding enzyme Arnit_2212 PF13193 AMP-binding enzyme C-terminal domain Arnit_2212 PF00668 Condensation domain Arnit_2213 PF00668 Condensation domain Arnit_2213 PF00550 Phosphopantetheine attachment site Arnit_2213 PF13193 AMP-binding enzyme C-terminal domain Arnit_2213 PF00501 AMP-binding enzyme Arnit_2214 PF00975 Thioesterase domain Arnit_2215 PF00107 Zinc-binding dehydrogenase Arnit_2215 PF08240 Alcohol dehydrogenase GroES-like domain Arnit_2216 PF01648 4'-phosphopantetheinyl transferase superfamily Arnit_2217 PF07715 TonB-dependent Receptor Plug Domain Arnit_2217 PF00593 TonB dependent receptor Arnit_2218 PF17131 Outer membrane lipoprotein-sorting protein Arnit_2221 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Arnit_2221 PF00749 tRNA synthetases class I (E and Q), catalytic domain Arnit_2225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Arnit_2229 PF04055 Radical SAM superfamily Arnit_2230 PF01208 Uroporphyrinogen decarboxylase (URO-D) Arnit_2232 PF02774 Semialdehyde dehydrogenase, dimerisation domain Arnit_2232 PF01118 Semialdehyde dehydrogenase, NAD binding domain Arnit_2233 PF00521 DNA gyrase/topoisomerase IV, subunit A Arnit_2233 PF03989 DNA gyrase C-terminal domain, beta-propeller Arnit_2235 PF01960 ArgJ family Arnit_2236 PF02254 TrkA-N domain Arnit_2236 PF07885 Ion channel Arnit_2237 PF00830 Ribosomal L28 family Arnit_2239 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Arnit_2240 PF00534 Glycosyl transferases group 1 Arnit_2240 PF13439 Glycosyltransferase Family 4 Arnit_2245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Arnit_2246 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Arnit_2247 PF01522 Polysaccharide deacetylase Arnit_2248 PF13439 Glycosyltransferase Family 4 Arnit_2248 PF00534 Glycosyl transferases group 1 Arnit_2250 PF00535 Glycosyl transferase family 2 Arnit_2252 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Arnit_2254 PF12838 4Fe-4S dicluster domain Arnit_2255 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_2255 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Arnit_2256 PF00310 Glutamine amidotransferases class-II Arnit_2256 PF01493 GXGXG motif Arnit_2256 PF01645 Conserved region in glutamate synthase Arnit_2256 PF04898 Glutamate synthase central domain Arnit_2257 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_2258 PF03480 Bacterial extracellular solute-binding protein, family 7 Arnit_2260 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Arnit_2261 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2262 PF00072 Response regulator receiver domain Arnit_2262 PF00486 Transcriptional regulatory protein, C terminal Arnit_2265 PF00271 Helicase conserved C-terminal domain Arnit_2265 PF00270 DEAD/DEAH box helicase Arnit_2268 PF08448 PAS fold Arnit_2268 PF00563 EAL domain Arnit_2268 PF00990 Diguanylate cyclase, GGDEF domain Arnit_2271 PF01965 DJ-1/PfpI family Arnit_2272 PF09339 IclR helix-turn-helix domain Arnit_2272 PF01614 Bacterial transcriptional regulator Arnit_2274 PF13344 Haloacid dehalogenase-like hydrolase Arnit_2274 PF00293 NUDIX domain Arnit_2276 PF11871 Domain of unknown function (DUF3391) Arnit_2276 PF01966 HD domain Arnit_2278 PF00860 Permease family Arnit_2280 PF05661 Protein of unknown function (DUF808) Arnit_2281 PF07690 Major Facilitator Superfamily Arnit_2282 PF13533 Biotin-lipoyl like Arnit_2283 PF02321 Outer membrane efflux protein Arnit_2286 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Arnit_2287 PF01029 NusB family Arnit_2288 PF00885 6,7-dimethyl-8-ribityllumazine synthase Arnit_2289 PF00793 DAHP synthetase I family Arnit_2293 PF00892 EamA-like transporter family Arnit_2294 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Arnit_2297 PF12833 Helix-turn-helix domain Arnit_2299 PF03958 Bacterial type II/III secretion system short domain Arnit_2299 PF00263 Bacterial type II and III secretion system protein Arnit_2300 PF09186 Domain of unknown function (DUF1949) Arnit_2300 PF01205 Uncharacterized protein family UPF0029 Arnit_2301 PF01728 FtsJ-like methyltransferase Arnit_2301 PF01479 S4 domain Arnit_2303 PF13649 Methyltransferase domain Arnit_2304 PF00578 AhpC/TSA family Arnit_2306 PF01565 FAD binding domain Arnit_2306 PF02913 FAD linked oxidases, C-terminal domain Arnit_2307 PF03631 Virulence factor BrkB Arnit_2317 PF00005 ABC transporter Arnit_2318 PF00501 AMP-binding enzyme Arnit_2318 PF13193 AMP-binding enzyme C-terminal domain Arnit_2323 PF00221 Aromatic amino acid lyase Arnit_2327 PF00550 Phosphopantetheine attachment site Arnit_2328 PF00109 Beta-ketoacyl synthase, N-terminal domain Arnit_2328 PF02801 Beta-ketoacyl synthase, C-terminal domain Arnit_2332 PF01048 Phosphorylase superfamily Arnit_2333 PF00698 Acyl transferase domain Arnit_2334 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Arnit_2336 PF00691 OmpA family Arnit_2337 PF04052 TolB amino-terminal domain Arnit_2339 PF02472 Biopolymer transport protein ExbD/TolR Arnit_2340 PF01618 MotA/TolQ/ExbB proton channel family Arnit_2341 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Arnit_2342 PF02874 ATP synthase alpha/beta family, beta-barrel domain Arnit_2342 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Arnit_2343 PF00231 ATP synthase Arnit_2344 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Arnit_2344 PF00306 ATP synthase alpha/beta chain, C terminal domain Arnit_2344 PF02874 ATP synthase alpha/beta family, beta-barrel domain Arnit_2345 PF00213 ATP synthase delta (OSCP) subunit Arnit_2346 PF00430 ATP synthase B/B' CF(0) Arnit_2348 PF17762 HTH domain found in ParB protein Arnit_2348 PF02195 ParB-like nuclease domain Arnit_2349 PF13614 AAA domain Arnit_2352 PF00989 PAS fold Arnit_2352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2352 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2353 PF02911 Formyl transferase, C-terminal domain Arnit_2353 PF00551 Formyl transferase Arnit_2354 PF00696 Amino acid kinase family Arnit_2355 PF01018 GTP1/OBG Arnit_2355 PF01926 50S ribosome-binding GTPase Arnit_2356 PF01016 Ribosomal L27 protein Arnit_2357 PF00829 Ribosomal prokaryotic L21 protein Arnit_2358 PF01042 Endoribonuclease L-PSP Arnit_2359 PF08275 DNA primase catalytic core, N-terminal domain Arnit_2359 PF13662 Toprim domain Arnit_2359 PF16730 DnaG-primase C-terminal, helicase-binding domain Arnit_2359 PF01807 CHC2 zinc finger Arnit_2361 PF00075 RNase H Arnit_2362 PF00035 Double-stranded RNA binding motif Arnit_2362 PF14622 Ribonuclease-III-like Arnit_2363 PF01264 Chorismate synthase Arnit_2364 PF02001 Protein of unknown function DUF134 Arnit_2365 PF01435 Peptidase family M48 Arnit_2366 PF00300 Histidine phosphatase superfamily (branch 1) Arnit_2368 PF12631 MnmE helical domain Arnit_2368 PF01926 50S ribosome-binding GTPase Arnit_2368 PF10396 GTP-binding protein TrmE N-terminus Arnit_2370 PF14849 YidC periplasmic domain Arnit_2370 PF02096 60Kd inner membrane protein Arnit_2371 PF01809 Putative membrane protein insertion efficiency factor Arnit_2372 PF00825 Ribonuclease P Arnit_2373 PF00468 Ribosomal protein L34 Arnit_2374 PF17871 AAA lid domain Arnit_2374 PF07724 AAA domain (Cdc48 subfamily) Arnit_2374 PF00004 ATPase family associated with various cellular activities (AAA) Arnit_2374 PF10431 C-terminal, D2-small domain, of ClpB protein Arnit_2374 PF02861 Clp amino terminal domain, pathogenicity island component Arnit_2375 PF01351 Ribonuclease HII Arnit_2379 PF00990 Diguanylate cyclase, GGDEF domain Arnit_2380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2380 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2380 PF08448 PAS fold Arnit_2380 PF13188 PAS domain Arnit_2380 PF00072 Response regulator receiver domain Arnit_2382 PF01625 Peptide methionine sulfoxide reductase Arnit_2382 PF01641 SelR domain Arnit_2383 PF01557 Fumarylacetoacetate (FAA) hydrolase family Arnit_2384 PF01047 MarR family Arnit_2385 PF00255 Glutathione peroxidase Arnit_2386 PF07681 DoxX Arnit_2389 PF00202 Aminotransferase class-III Arnit_2390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2390 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2391 PF07690 Major Facilitator Superfamily Arnit_2392 PF02203 Tar ligand binding domain homologue Arnit_2392 PF00672 HAMP domain Arnit_2392 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2395 PF02028 BCCT, betaine/carnitine/choline family transporter Arnit_2396 PF13673 Acetyltransferase (GNAT) domain Arnit_2397 PF02447 GntP family permease Arnit_2398 PF12833 Helix-turn-helix domain Arnit_2398 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Arnit_2400 PF12823 Domain of unknown function (DUF3817) Arnit_2402 PF02142 MGS-like domain Arnit_2402 PF01808 AICARFT/IMPCHase bienzyme Arnit_2403 PF00672 HAMP domain Arnit_2403 PF00909 Ammonium Transporter Family Arnit_2404 PF07478 D-ala D-ala ligase C-terminus Arnit_2404 PF01820 D-ala D-ala ligase N-terminus Arnit_2406 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Arnit_2406 PF02769 AIR synthase related protein, C-terminal domain Arnit_2406 PF00586 AIR synthase related protein, N-terminal domain Arnit_2408 PF01551 Peptidase family M23 Arnit_2409 PF00571 CBS domain Arnit_2409 PF01769 Divalent cation transporter Arnit_2409 PF03448 MgtE intracellular N domain Arnit_2411 PF01227 GTP cyclohydrolase I Arnit_2412 PF00482 Type II secretion system (T2SS), protein F Arnit_2413 PF00437 Type II/IV secretion system protein Arnit_2416 PF07650 KH domain Arnit_2416 PF01926 50S ribosome-binding GTPase Arnit_2417 PF01078 Magnesium chelatase, subunit ChlI Arnit_2417 PF13335 Magnesium chelatase, subunit ChlI C-terminal Arnit_2418 PF01327 Polypeptide deformylase Arnit_2419 PF00574 Clp protease Arnit_2420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Arnit_2420 PF05698 Bacterial trigger factor protein (TF) C-terminus Arnit_2420 PF05697 Bacterial trigger factor protein (TF) Arnit_2422 PF03976 Polyphosphate kinase 2 (PPK2) Arnit_2423 PF03976 Polyphosphate kinase 2 (PPK2) Arnit_2424 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Arnit_2425 PF00301 Rubredoxin Arnit_2426 PF16653 Saccharopine dehydrogenase C-terminal domain Arnit_2426 PF03435 Saccharopine dehydrogenase NADP binding domain Arnit_2427 PF13417 Glutathione S-transferase, N-terminal domain Arnit_2427 PF00043 Glutathione S-transferase, C-terminal domain Arnit_2428 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2428 PF00672 HAMP domain Arnit_2428 PF02203 Tar ligand binding domain homologue Arnit_2437 PF13657 HipA N-terminal domain Arnit_2437 PF07804 HipA-like C-terminal domain Arnit_2439 PF08448 PAS fold Arnit_2439 PF00990 Diguanylate cyclase, GGDEF domain Arnit_2440 PF00270 DEAD/DEAH box helicase Arnit_2440 PF00271 Helicase conserved C-terminal domain Arnit_2441 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2441 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2442 PF00072 Response regulator receiver domain Arnit_2443 PF02203 Tar ligand binding domain homologue Arnit_2443 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2443 PF00672 HAMP domain Arnit_2447 PF01475 Ferric uptake regulator family Arnit_2448 PF04023 FeoA domain Arnit_2449 PF07670 Nucleoside recognition Arnit_2449 PF07664 Ferrous iron transport protein B C terminus Arnit_2449 PF02421 Ferrous iron transport protein B Arnit_2451 PF04376 Arginine-tRNA-protein transferase, N terminus Arnit_2451 PF04377 Arginine-tRNA-protein transferase, C terminus Arnit_2452 PF00290 Tryptophan synthase alpha chain Arnit_2456 PF02548 Ketopantoate hydroxymethyltransferase Arnit_2457 PF05491 RuvB C-terminal winged helix domain Arnit_2457 PF05496 Holliday junction DNA helicase RuvB P-loop domain Arnit_2457 PF17864 RuvB AAA lid domain Arnit_2458 PF01594 AI-2E family transporter Arnit_2463 PF00004 ATPase family associated with various cellular activities (AAA) Arnit_2463 PF10431 C-terminal, D2-small domain, of ClpB protein Arnit_2463 PF17871 AAA lid domain Arnit_2463 PF02861 Clp amino terminal domain, pathogenicity island component Arnit_2463 PF07724 AAA domain (Cdc48 subfamily) Arnit_2464 PF02617 ATP-dependent Clp protease adaptor protein ClpS Arnit_2466 PF13840 ACT domain Arnit_2466 PF00696 Amino acid kinase family Arnit_2467 PF06339 Ectoine synthase Arnit_2468 PF00202 Aminotransferase class-III Arnit_2469 PF00583 Acetyltransferase (GNAT) family Arnit_2474 PF00771 FHIPEP family Arnit_2476 PF18269 T3SS EscN ATPase C-terminal domain Arnit_2476 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Arnit_2478 PF01312 FlhB HrpN YscU SpaS Family Arnit_2481 PF00460 Flagella basal body rod protein Arnit_2481 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Arnit_2482 PF02049 Flagellar hook-basal body complex protein FliE Arnit_2484 PF10609 NUBPL iron-transfer P-loop NTPase Arnit_2485 PF00448 SRP54-type protein, GTPase domain Arnit_2491 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Arnit_2495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Arnit_2495 PF00460 Flagella basal body rod protein Arnit_2498 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Arnit_2500 PF14842 FliG N-terminal domain Arnit_2500 PF14841 FliG middle domain Arnit_2500 PF01706 FliG C-terminal domain Arnit_2501 PF01514 Secretory protein of YscJ/FliF family Arnit_2501 PF08345 Flagellar M-ring protein C-terminal Arnit_2502 PF00460 Flagella basal body rod protein Arnit_2503 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Arnit_2503 PF00460 Flagella basal body rod protein Arnit_2506 PF00460 Flagella basal body rod protein Arnit_2506 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Arnit_2509 PF01782 RimM N-terminal domain Arnit_2511 PF00886 Ribosomal protein S16 Arnit_2512 PF00448 SRP54-type protein, GTPase domain Arnit_2512 PF02881 SRP54-type protein, helical bundle domain Arnit_2512 PF02978 Signal peptide binding domain Arnit_2513 PF00849 RNA pseudouridylate synthase Arnit_2516 PF01784 NIF3 (NGG1p interacting factor 3) Arnit_2517 PF02091 Glycyl-tRNA synthetase alpha subunit Arnit_2518 PF00731 AIR carboxylase Arnit_2519 PF13193 AMP-binding enzyme C-terminal domain Arnit_2519 PF00501 AMP-binding enzyme Arnit_2519 PF01553 Acyltransferase Arnit_2520 PF00892 EamA-like transporter family Arnit_2525 PF07715 TonB-dependent Receptor Plug Domain Arnit_2525 PF00593 TonB dependent receptor Arnit_2526 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Arnit_2526 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Arnit_2527 PF02779 Transketolase, pyrimidine binding domain Arnit_2527 PF00456 Transketolase, thiamine diphosphate binding domain Arnit_2527 PF02780 Transketolase, C-terminal domain Arnit_2529 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2529 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2532 PF03412 Peptidase C39 family Arnit_2532 PF00005 ABC transporter Arnit_2532 PF00664 ABC transporter transmembrane region Arnit_2534 PF00072 Response regulator receiver domain Arnit_2539 PF02719 Polysaccharide biosynthesis protein Arnit_2540 PF00953 Glycosyl transferase family 4 Arnit_2541 PF01370 NAD dependent epimerase/dehydratase family Arnit_2542 PF13477 Glycosyl transferase 4-like Arnit_2542 PF00534 Glycosyl transferases group 1 Arnit_2543 PF13537 Glutamine amidotransferase domain Arnit_2543 PF00733 Asparagine synthase Arnit_2545 PF13439 Glycosyltransferase Family 4 Arnit_2545 PF00534 Glycosyl transferases group 1 Arnit_2546 PF00664 ABC transporter transmembrane region Arnit_2546 PF00005 ABC transporter Arnit_2547 PF13537 Glutamine amidotransferase domain Arnit_2547 PF00733 Asparagine synthase Arnit_2550 PF00534 Glycosyl transferases group 1 Arnit_2552 PF16363 GDP-mannose 4,6 dehydratase Arnit_2555 PF01370 NAD dependent epimerase/dehydratase family Arnit_2557 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Arnit_2559 PF16363 GDP-mannose 4,6 dehydratase Arnit_2560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Arnit_2561 PF00483 Nucleotidyl transferase Arnit_2565 PF00733 Asparagine synthase Arnit_2565 PF13537 Glutamine amidotransferase domain Arnit_2566 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Arnit_2567 PF16363 GDP-mannose 4,6 dehydratase Arnit_2568 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Arnit_2569 PF00132 Bacterial transferase hexapeptide (six repeats) Arnit_2570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Arnit_2570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Arnit_2571 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Arnit_2571 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Arnit_2571 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Arnit_2572 PF01370 NAD dependent epimerase/dehydratase family Arnit_2574 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Arnit_2574 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Arnit_2574 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Arnit_2576 PF16363 GDP-mannose 4,6 dehydratase Arnit_2577 PF00920 Dehydratase family Arnit_2578 PF00595 PDZ domain Arnit_2579 PF00072 Response regulator receiver domain Arnit_2579 PF00486 Transcriptional regulatory protein, C terminal Arnit_2580 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2580 PF08521 Two-component sensor kinase N-terminal Arnit_2582 PF13476 AAA domain Arnit_2583 PF01513 ATP-NAD kinase Arnit_2584 PF00529 HlyD membrane-fusion protein of T1SS Arnit_2584 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arnit_2585 PF03412 Peptidase C39 family Arnit_2585 PF00664 ABC transporter transmembrane region Arnit_2585 PF00005 ABC transporter Arnit_2587 PF03144 Elongation factor Tu domain 2 Arnit_2587 PF03764 Elongation factor G, domain IV Arnit_2587 PF14492 Elongation Factor G, domain II Arnit_2587 PF00679 Elongation factor G C-terminus Arnit_2587 PF00009 Elongation factor Tu GTP binding domain Arnit_2588 PF00177 Ribosomal protein S7p/S5e Arnit_2589 PF00164 Ribosomal protein S12/S23 Arnit_2590 PF00672 HAMP domain Arnit_2590 PF02203 Tar ligand binding domain homologue Arnit_2590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2591 PF07690 Major Facilitator Superfamily Arnit_2592 PF00561 alpha/beta hydrolase fold Arnit_2597 PF01810 LysE type translocator Arnit_2598 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Arnit_2599 PF09962 Uncharacterized conserved protein (DUF2196) Arnit_2602 PF04055 Radical SAM superfamily Arnit_2603 PF03099 Biotin/lipoate A/B protein ligase family Arnit_2604 PF17831 Pyruvate dehydrogenase E1 component middle domain Arnit_2604 PF00456 Transketolase, thiamine diphosphate binding domain Arnit_2605 PF00364 Biotin-requiring enzyme Arnit_2605 PF02817 e3 binding domain Arnit_2605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Arnit_2606 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Arnit_2606 PF07992 Pyridine nucleotide-disulphide oxidoreductase Arnit_2609 PF00005 ABC transporter Arnit_2612 PF01891 Cobalt uptake substrate-specific transmembrane region Arnit_2612 PF13190 PDGLE domain Arnit_2614 PF03795 YCII-related domain Arnit_2616 PF00623 RNA polymerase Rpb1, domain 2 Arnit_2616 PF04983 RNA polymerase Rpb1, domain 3 Arnit_2616 PF05000 RNA polymerase Rpb1, domain 4 Arnit_2616 PF04997 RNA polymerase Rpb1, domain 1 Arnit_2616 PF04998 RNA polymerase Rpb1, domain 5 Arnit_2617 PF00562 RNA polymerase Rpb2, domain 6 Arnit_2617 PF04561 RNA polymerase Rpb2, domain 2 Arnit_2617 PF10385 RNA polymerase beta subunit external 1 domain Arnit_2617 PF04565 RNA polymerase Rpb2, domain 3 Arnit_2617 PF04560 RNA polymerase Rpb2, domain 7 Arnit_2617 PF04563 RNA polymerase beta subunit Arnit_2618 PF16320 Ribosomal protein L7/L12 dimerisation domain Arnit_2618 PF00542 Ribosomal protein L7/L12 C-terminal domain Arnit_2619 PF00466 Ribosomal protein L10 Arnit_2620 PF00687 Ribosomal protein L1p/L10e family Arnit_2621 PF00298 Ribosomal protein L11, RNA binding domain Arnit_2621 PF03946 Ribosomal protein L11, N-terminal domain Arnit_2622 PF02357 Transcription termination factor nusG Arnit_2624 PF00471 Ribosomal protein L33 Arnit_2625 PF03144 Elongation factor Tu domain 2 Arnit_2625 PF00009 Elongation factor Tu GTP binding domain Arnit_2625 PF03143 Elongation factor Tu C-terminal domain Arnit_2626 PF08245 Mur ligase middle domain Arnit_2627 PF00953 Glycosyl transferase family 4 Arnit_2627 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Arnit_2628 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Arnit_2628 PF01676 Metalloenzyme superfamily Arnit_2629 PF09383 NIL domain Arnit_2629 PF00005 ABC transporter Arnit_2630 PF00912 Transglycosylase Arnit_2630 PF00905 Penicillin binding protein transpeptidase domain Arnit_2631 PF03951 Glutamine synthetase, beta-Grasp domain Arnit_2631 PF00120 Glutamine synthetase, catalytic domain Arnit_2632 PF02811 PHP domain Arnit_2633 PF02391 MoaE protein Arnit_2635 PF02621 Menaquinone biosynthesis Arnit_2636 PF02673 Bacitracin resistance protein BacA Arnit_2637 PF04101 Glycosyltransferase family 28 C-terminal domain Arnit_2637 PF03033 Glycosyltransferase family 28 N-terminal domain Arnit_2638 PF01098 Cell cycle protein Arnit_2639 PF00905 Penicillin binding protein transpeptidase domain Arnit_2639 PF03793 PASTA domain Arnit_2639 PF03717 Penicillin-binding Protein dimerisation domain Arnit_2640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Arnit_2645 PF00117 Glutamine amidotransferase class-I Arnit_2646 PF13416 Bacterial extracellular solute-binding protein Arnit_2647 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_2648 PF00005 ABC transporter Arnit_2648 PF08402 TOBE domain Arnit_2650 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Arnit_2651 PF00155 Aminotransferase class I and II Arnit_2652 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Arnit_2653 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Arnit_2654 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Arnit_2654 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Arnit_2656 PF10531 SLBB domain Arnit_2656 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Arnit_2656 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Arnit_2657 PF00285 Citrate synthase, C-terminal domain Arnit_2658 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Arnit_2658 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Arnit_2658 PF00384 Molybdopterin oxidoreductase Arnit_2659 PF00146 NADH dehydrogenase Arnit_2660 PF12838 4Fe-4S dicluster domain Arnit_2661 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Arnit_2662 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Arnit_2663 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Arnit_2663 PF00361 Proton-conducting membrane transporter Arnit_2664 PF00361 Proton-conducting membrane transporter Arnit_2664 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Arnit_2665 PF00361 Proton-conducting membrane transporter Arnit_2666 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Arnit_2667 PF02910 Fumarate reductase flavoprotein C-term Arnit_2667 PF00890 FAD binding domain Arnit_2668 PF13085 2Fe-2S iron-sulfur cluster binding domain Arnit_2668 PF13183 4Fe-4S dicluster domain Arnit_2669 PF00350 Dynamin family Arnit_2670 PF00350 Dynamin family Arnit_2674 PF01475 Ferric uptake regulator family Arnit_2684 PF00258 Flavodoxin Arnit_2686 PF08442 ATP-grasp domain Arnit_2686 PF00549 CoA-ligase Arnit_2687 PF02629 CoA binding domain Arnit_2687 PF00549 CoA-ligase Arnit_2689 PF00575 S1 RNA binding domain Arnit_2689 PF09371 Tex-like protein N-terminal domain Arnit_2689 PF16921 Tex protein YqgF-like domain Arnit_2689 PF17674 HHH domain Arnit_2690 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Arnit_2693 PF03466 LysR substrate binding domain Arnit_2693 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Arnit_2695 PF01361 Tautomerase enzyme Arnit_2697 PF00186 Dihydrofolate reductase Arnit_2698 PF00303 Thymidylate synthase Arnit_2700 PF01914 MarC family integral membrane protein Arnit_2701 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_2702 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_2703 PF00005 ABC transporter Arnit_2705 PF01425 Amidase Arnit_2706 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Arnit_2707 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_2708 PF12911 N-terminal TM domain of oligopeptide transport permease C Arnit_2708 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_2709 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Arnit_2709 PF00005 ABC transporter Arnit_2710 PF00072 Response regulator receiver domain Arnit_2711 PF00989 PAS fold Arnit_2711 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2711 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2712 PF09382 RQC domain Arnit_2712 PF00270 DEAD/DEAH box helicase Arnit_2712 PF00271 Helicase conserved C-terminal domain Arnit_2712 PF16124 RecQ zinc-binding Arnit_2712 PF00570 HRDC domain Arnit_2714 PF00990 Diguanylate cyclase, GGDEF domain Arnit_2714 PF00072 Response regulator receiver domain Arnit_2715 PF03358 NADPH-dependent FMN reductase Arnit_2716 PF01638 HxlR-like helix-turn-helix Arnit_2717 PF06445 GyrI-like small molecule binding domain Arnit_2717 PF12833 Helix-turn-helix domain Arnit_2718 PF01758 Sodium Bile acid symporter family Arnit_2719 PF01758 Sodium Bile acid symporter family Arnit_2720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Arnit_2721 PF00857 Isochorismatase family Arnit_2722 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Arnit_2722 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Arnit_2728 PF00285 Citrate synthase, C-terminal domain Arnit_2729 PF00330 Aconitase family (aconitate hydratase) Arnit_2729 PF00694 Aconitase C-terminal domain Arnit_2730 PF04303 PrpF protein Arnit_2731 PF03167 Uracil DNA glycosylase superfamily Arnit_2732 PF00857 Isochorismatase family Arnit_2733 PF03900 Porphobilinogen deaminase, C-terminal domain Arnit_2733 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Arnit_2735 PF12170 DNA polymerase III tau subunit V interacting with alpha Arnit_2735 PF12169 DNA polymerase III subunits gamma and tau domain III Arnit_2735 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Arnit_2736 PF01177 Asp/Glu/Hydantoin racemase Arnit_2737 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2737 PF02702 Osmosensitive K+ channel His kinase sensor domain Arnit_2737 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2737 PF13493 Domain of unknown function (DUF4118) Arnit_2738 PF03180 NLPA lipoprotein Arnit_2739 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_2740 PF09383 NIL domain Arnit_2740 PF00005 ABC transporter Arnit_2743 PF00271 Helicase conserved C-terminal domain Arnit_2743 PF04851 Type III restriction enzyme, res subunit Arnit_2745 PF07498 Rho termination factor, N-terminal domain Arnit_2745 PF07497 Rho termination factor, RNA-binding domain Arnit_2745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Arnit_2746 PF00578 AhpC/TSA family Arnit_2746 PF10417 C-terminal domain of 1-Cys peroxiredoxin Arnit_2748 PF00334 Nucleoside diphosphate kinase Arnit_2750 PF01783 Ribosomal L32p protein family Arnit_2751 PF02504 Fatty acid synthesis protein Arnit_2752 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Arnit_2752 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Arnit_2757 PF13188 PAS domain Arnit_2757 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2757 PF13426 PAS domain Arnit_2757 PF00989 PAS fold Arnit_2757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2758 PF00072 Response regulator receiver domain Arnit_2758 PF00486 Transcriptional regulatory protein, C terminal Arnit_2759 PF00425 chorismate binding enzyme Arnit_2760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Arnit_2760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Arnit_2762 PF00202 Aminotransferase class-III Arnit_2766 PF02887 Pyruvate kinase, alpha/beta domain Arnit_2766 PF00391 PEP-utilising enzyme, mobile domain Arnit_2766 PF00224 Pyruvate kinase, barrel domain Arnit_2767 PF16867 Dimethlysulfonioproprionate lyase Arnit_2770 PF00890 FAD binding domain Arnit_2770 PF14537 Cytochrome c3 Arnit_2771 PF02954 Bacterial regulatory protein, Fis family Arnit_2771 PF00158 Sigma-54 interaction domain Arnit_2771 PF00072 Response regulator receiver domain Arnit_2772 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2772 PF00672 HAMP domain Arnit_2772 PF02743 Cache domain Arnit_2776 PF00171 Aldehyde dehydrogenase family Arnit_2777 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2777 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2777 PF09456 RcsC Alpha-Beta-Loop (ABL) Arnit_2777 PF00072 Response regulator receiver domain Arnit_2778 PF00486 Transcriptional regulatory protein, C terminal Arnit_2778 PF00072 Response regulator receiver domain Arnit_2779 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Arnit_2779 PF00289 Biotin carboxylase, N-terminal domain Arnit_2779 PF02785 Biotin carboxylase C-terminal domain Arnit_2780 PF04055 Radical SAM superfamily Arnit_2780 PF13186 Iron-sulfur cluster-binding domain Arnit_2781 PF05402 Coenzyme PQQ synthesis protein D (PqqD) Arnit_2782 PF03070 TENA/THI-4/PQQC family Arnit_2784 PF12706 Beta-lactamase superfamily domain Arnit_2787 PF00005 ABC transporter Arnit_2795 PF18395 Cas3 C-terminal domain Arnit_2795 PF18019 HD domain Arnit_2795 PF00270 DEAD/DEAH box helicase Arnit_2798 PF01867 CRISPR associated protein Cas1 Arnit_2801 PF01047 MarR family Arnit_2803 PF00005 ABC transporter Arnit_2810 PF00883 Cytosol aminopeptidase family, catalytic domain Arnit_2810 PF02789 Cytosol aminopeptidase family, N-terminal domain Arnit_2811 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Arnit_2811 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Arnit_2812 PF12833 Helix-turn-helix domain Arnit_2813 PF00155 Aminotransferase class I and II Arnit_2815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_2815 PF00384 Molybdopterin oxidoreductase Arnit_2815 PF01568 Molydopterin dinucleotide binding domain Arnit_2815 PF12838 4Fe-4S dicluster domain Arnit_2815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Arnit_2816 PF02021 Uncharacterised protein family UPF0102 Arnit_2817 PF00654 Voltage gated chloride channel Arnit_2819 PF02254 TrkA-N domain Arnit_2819 PF00999 Sodium/hydrogen exchanger family Arnit_2820 PF00155 Aminotransferase class I and II Arnit_2821 PF00484 Carbonic anhydrase Arnit_2823 PF04055 Radical SAM superfamily Arnit_2825 PF04028 Domain of unknown function (DUF374) Arnit_2826 PF04055 Radical SAM superfamily Arnit_2826 PF00919 Uncharacterized protein family UPF0004 Arnit_2826 PF01938 TRAM domain Arnit_2828 PF13184 NusA-like KH domain Arnit_2828 PF08529 NusA N-terminal domain Arnit_2829 PF09190 DALR domain Arnit_2829 PF01406 tRNA synthetases class I (C) catalytic domain Arnit_2831 PF01084 Ribosomal protein S18 Arnit_2832 PF00436 Single-strand binding protein family Arnit_2833 PF01250 Ribosomal protein S6 Arnit_2835 PF00773 RNB domain Arnit_2836 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Arnit_2836 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Arnit_2837 PF04748 Divergent polysaccharide deacetylase Arnit_2839 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2839 PF00672 HAMP domain Arnit_2839 PF02203 Tar ligand binding domain homologue Arnit_2841 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_2843 PF06965 Na+/H+ antiporter 1 Arnit_2844 PF02875 Mur ligase family, glutamate ligase domain Arnit_2844 PF08245 Mur ligase middle domain Arnit_2844 PF01225 Mur ligase family, catalytic domain Arnit_2846 PF00155 Aminotransferase class I and II Arnit_2849 PF00512 His Kinase A (phospho-acceptor) domain Arnit_2849 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_2851 PF01702 Queuine tRNA-ribosyltransferase Arnit_2852 PF02686 Glu-tRNAGln amidotransferase C subunit Arnit_2853 PF03960 ArsC family Arnit_2856 PF01474 Class-II DAHP synthetase family Arnit_2857 PF00923 Transaldolase/Fructose-6-phosphate aldolase Arnit_2859 PF03652 Holliday junction resolvase Arnit_2864 PF01648 4'-phosphopantetheinyl transferase superfamily Arnit_2865 PF00528 Binding-protein-dependent transport system inner membrane component Arnit_2866 PF02569 Pantoate-beta-alanine ligase Arnit_2868 PF04055 Radical SAM superfamily Arnit_2868 PF18693 TRAM domain Arnit_2868 PF00919 Uncharacterized protein family UPF0004 Arnit_2869 PF01171 PP-loop family Arnit_2871 PF02561 Flagellar protein FliS Arnit_2872 PF07195 Flagellar hook-associated protein 2 C-terminus Arnit_2872 PF02465 Flagellar hook-associated protein 2 N-terminus Arnit_2873 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Arnit_2873 PF00460 Flagella basal body rod protein Arnit_2873 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Arnit_2873 PF00460 Flagella basal body rod protein Arnit_2874 PF02107 Flagellar L-ring protein Arnit_2879 PF01313 Bacterial export proteins, family 3 Arnit_2881 PF02119 Flagellar P-ring protein Arnit_2882 PF02154 Flagellar motor switch protein FliM Arnit_2882 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Arnit_2884 PF00543 Nitrogen regulatory protein P-II Arnit_2885 PF00909 Ammonium Transporter Family Arnit_2886 PF00543 Nitrogen regulatory protein P-II Arnit_2887 PF00909 Ammonium Transporter Family Arnit_2889 PF00072 Response regulator receiver domain Arnit_2889 PF02954 Bacterial regulatory protein, Fis family Arnit_2889 PF00158 Sigma-54 interaction domain Arnit_2890 PF01966 HD domain Arnit_2890 PF08335 GlnD PII-uridylyltransferase Arnit_2891 PF11412 Disulphide bond corrector protein DsbC Arnit_2891 PF00085 Thioredoxin Arnit_2891 PF02683 Cytochrome C biogenesis protein transmembrane region Arnit_2892 PF00085 Thioredoxin Arnit_2895 PF02666 Phosphatidylserine decarboxylase Arnit_2899 PF00012 Hsp70 protein Arnit_2900 PF01025 GrpE Arnit_2910 PF00072 Response regulator receiver domain Arnit_2910 PF00486 Transcriptional regulatory protein, C terminal Arnit_2911 PF01416 tRNA pseudouridine synthase Arnit_2913 PF01478 Type IV leader peptidase family Arnit_2913 PF06750 Bacterial Peptidase A24 N-terminal domain Arnit_2914 PF01255 Putative undecaprenyl diphosphate synthase Arnit_2915 PF02441 Flavoprotein Arnit_2915 PF04127 DNA / pantothenate metabolism flavoprotein Arnit_2916 PF14602 Hexapeptide repeat of succinyl-transferase Arnit_2916 PF12804 MobA-like NTP transferase domain Arnit_2918 PF00271 Helicase conserved C-terminal domain Arnit_2918 PF08148 DSHCT (NUC185) domain Arnit_2918 PF00270 DEAD/DEAH box helicase Arnit_2919 PF05958 tRNA (Uracil-5-)-methyltransferase Arnit_2920 PF00669 Bacterial flagellin N-terminal helical region Arnit_2920 PF00700 Bacterial flagellin C-terminal helical region Arnit_2920 PF07196 Flagellin hook IN motif Arnit_2921 PF00700 Bacterial flagellin C-terminal helical region Arnit_2921 PF07196 Flagellin hook IN motif Arnit_2921 PF00669 Bacterial flagellin N-terminal helical region Arnit_2923 PF13580 SIS domain Arnit_2924 PF00483 Nucleotidyl transferase Arnit_2926 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Arnit_2927 PF01370 NAD dependent epimerase/dehydratase family Arnit_2928 PF01370 NAD dependent epimerase/dehydratase family Arnit_2929 PF00456 Transketolase, thiamine diphosphate binding domain Arnit_2930 PF02780 Transketolase, C-terminal domain Arnit_2930 PF02779 Transketolase, pyrimidine binding domain Arnit_2933 PF14306 PUA-like domain Arnit_2933 PF01747 ATP-sulfurylase Arnit_2935 PF00459 Inositol monophosphatase family Arnit_2941 PF00465 Iron-containing alcohol dehydrogenase Arnit_2942 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Arnit_2942 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Arnit_2946 PF02222 ATP-grasp domain Arnit_2950 PF03102 NeuB family Arnit_2950 PF08666 SAF domain Arnit_2951 PF02348 Cytidylyltransferase Arnit_2952 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Arnit_2953 PF02719 Polysaccharide biosynthesis protein Arnit_2955 PF00154 recA bacterial DNA recombination protein Arnit_2956 PF03952 Enolase, N-terminal domain Arnit_2956 PF00113 Enolase, C-terminal TIM barrel domain Arnit_2959 PF00999 Sodium/hydrogen exchanger family Arnit_2959 PF02080 TrkA-C domain Arnit_2959 PF02254 TrkA-N domain Arnit_2960 PF06968 Biotin and Thiamin Synthesis associated domain Arnit_2960 PF04055 Radical SAM superfamily Arnit_2962 PF13368 Topoisomerase C-terminal repeat Arnit_2962 PF01751 Toprim domain Arnit_2962 PF01131 DNA topoisomerase Arnit_2963 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Arnit_2964 PF02621 Menaquinone biosynthesis Arnit_2966 PF00361 Proton-conducting membrane transporter Arnit_2967 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Arnit_2967 PF00361 Proton-conducting membrane transporter Arnit_2968 PF00361 Proton-conducting membrane transporter Arnit_2968 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Arnit_2969 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Arnit_2970 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Arnit_2971 PF12838 4Fe-4S dicluster domain Arnit_2972 PF00146 NADH dehydrogenase Arnit_2973 PF01568 Molydopterin dinucleotide binding domain Arnit_2973 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Arnit_2973 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Arnit_2973 PF00384 Molybdopterin oxidoreductase Arnit_2973 PF12838 4Fe-4S dicluster domain Arnit_2976 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Arnit_2977 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Arnit_2978 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Arnit_2979 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Arnit_2980 PF17862 AAA+ lid domain Arnit_2980 PF01434 Peptidase family M41 Arnit_2980 PF00004 ATPase family associated with various cellular activities (AAA) Arnit_2980 PF06480 FtsH Extracellular Arnit_2984 PF04556 DpnII restriction endonuclease Arnit_2986 PF02086 D12 class N6 adenine-specific DNA methyltransferase Arnit_2987 PF01555 DNA methylase Arnit_2989 PF01261 Xylose isomerase-like TIM barrel Arnit_2990 PF02652 L-lactate permease Arnit_2992 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_2992 PF00672 HAMP domain Arnit_2992 PF12729 Four helix bundle sensory module for signal transduction Arnit_2993 PF01613 Flavin reductase like domain Arnit_2994 PF00206 Lyase Arnit_2994 PF10415 Fumarase C C-terminus Arnit_2997 PF01575 MaoC like domain Arnit_2998 PF00501 AMP-binding enzyme Arnit_2998 PF13193 AMP-binding enzyme C-terminal domain Arnit_3002 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_3002 PF00512 His Kinase A (phospho-acceptor) domain Arnit_3002 PF00072 Response regulator receiver domain Arnit_3002 PF00497 Bacterial extracellular solute-binding proteins, family 3 Arnit_3003 PF02677 Epoxyqueuosine reductase QueH Arnit_3004 PF02684 Lipid-A-disaccharide synthetase Arnit_3005 PF07977 FabA-like domain Arnit_3006 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Arnit_3006 PF00132 Bacterial transferase hexapeptide (six repeats) Arnit_3007 PF10431 C-terminal, D2-small domain, of ClpB protein Arnit_3007 PF07724 AAA domain (Cdc48 subfamily) Arnit_3007 PF06689 ClpX C4-type zinc finger Arnit_3010 PF00563 EAL domain Arnit_3010 PF08495 FIST N domain Arnit_3010 PF10442 FIST C domain Arnit_3010 PF00990 Diguanylate cyclase, GGDEF domain Arnit_3011 PF00989 PAS fold Arnit_3011 PF00672 HAMP domain Arnit_3011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_3011 PF00512 His Kinase A (phospho-acceptor) domain Arnit_3012 PF00677 Lumazine binding domain Arnit_3013 PF13932 GidA associated domain Arnit_3013 PF01134 Glucose inhibited division protein A Arnit_3016 PF02203 Tar ligand binding domain homologue Arnit_3016 PF00672 HAMP domain Arnit_3016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_3020 PF16226 Domain of unknown function (DUF4885) Arnit_3021 PF00034 Cytochrome c Arnit_3021 PF03150 Di-haem cytochrome c peroxidase Arnit_3024 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arnit_3025 PF00873 AcrB/AcrD/AcrF family Arnit_3027 PF13746 4Fe-4S dicluster domain Arnit_3027 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Arnit_3027 PF12801 4Fe-4S binding domain Arnit_3028 PF00117 Glutamine amidotransferase class-I Arnit_3028 PF06418 CTP synthase N-terminus Arnit_3029 PF01368 DHH family Arnit_3029 PF02272 DHHA1 domain Arnit_3029 PF17768 RecJ OB domain Arnit_3034 PF00211 Adenylate and Guanylate cyclase catalytic domain Arnit_3037 PF01734 Patatin-like phospholipase Arnit_3038 PF14579 Helix-hairpin-helix motif Arnit_3038 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Arnit_3038 PF07733 Bacterial DNA polymerase III alpha NTPase domain Arnit_3038 PF02811 PHP domain Arnit_3039 PF01975 Survival protein SurE Arnit_3044 PF01967 MoaC family Arnit_3045 PF01165 Ribosomal protein S21 Arnit_3046 PF00115 Cytochrome C and Quinol oxidase polypeptide I Arnit_3050 PF01027 Inhibitor of apoptosis-promoting Bax1 Arnit_3051 PF02581 Thiamine monophosphate synthase Arnit_3051 PF17792 ThiD2 family Arnit_3053 PF03840 Preprotein translocase SecG subunit Arnit_3054 PF01765 Ribosome recycling factor Arnit_3055 PF00156 Phosphoribosyl transferase domain Arnit_3057 PF12832 MFS_1 like family Arnit_3058 PF00990 Diguanylate cyclase, GGDEF domain Arnit_3058 PF00563 EAL domain Arnit_3058 PF08448 PAS fold Arnit_3059 PF03883 Peroxide stress protein YaaA Arnit_3060 PF02810 SEC-C motif Arnit_3064 PF00171 Aldehyde dehydrogenase family Arnit_3065 PF00205 Thiamine pyrophosphate enzyme, central domain Arnit_3065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Arnit_3065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Arnit_3066 PF13419 Haloacid dehalogenase-like hydrolase Arnit_3069 PF00072 Response regulator receiver domain Arnit_3069 PF00990 Diguanylate cyclase, GGDEF domain Arnit_3072 PF01553 Acyltransferase Arnit_3081 PF00529 HlyD membrane-fusion protein of T1SS Arnit_3081 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arnit_3082 PF00873 AcrB/AcrD/AcrF family Arnit_3083 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Arnit_3083 PF02321 Outer membrane efflux protein Arnit_3085 PF01053 Cys/Met metabolism PLP-dependent enzyme Arnit_3086 PF02082 Transcriptional regulator Arnit_3087 PF00291 Pyridoxal-phosphate dependent enzyme Arnit_3089 PF01507 Phosphoadenosine phosphosulfate reductase family Arnit_3090 PF01507 Phosphoadenosine phosphosulfate reductase family Arnit_3091 PF00009 Elongation factor Tu GTP binding domain Arnit_3092 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Arnit_3092 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Arnit_3093 PF00266 Aminotransferase class-V Arnit_3097 PF00149 Calcineurin-like phosphoesterase Arnit_3098 PF08447 PAS fold Arnit_3098 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_3099 PF02203 Tar ligand binding domain homologue Arnit_3099 PF00672 HAMP domain Arnit_3099 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Arnit_3101 PF14403 Circularly permuted ATP-grasp type 2 Arnit_3101 PF04168 A predicted alpha-helical domain with a conserved ER motif. Arnit_3102 PF01841 Transglutaminase-like superfamily Arnit_3102 PF08379 Bacterial transglutaminase-like N-terminal region Arnit_3104 PF14403 Circularly permuted ATP-grasp type 2 Arnit_3106 PF00011 Hsp20/alpha crystallin family Arnit_3107 PF17203 Single cache domain 3 Arnit_3107 PF00989 PAS fold Arnit_3107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_3107 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Arnit_3112 PF01206 Sulfurtransferase TusA Arnit_3113 PF04960 Glutaminase Arnit_3115 PF00072 Response regulator receiver domain Arnit_3115 PF00486 Transcriptional regulatory protein, C terminal Arnit_3118 PF00512 His Kinase A (phospho-acceptor) domain Arnit_3118 PF00672 HAMP domain Arnit_3118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_3119 PF08279 HTH domain Arnit_3119 PF00072 Response regulator receiver domain Arnit_3124 PF00005 ABC transporter Arnit_3129 PF00149 Calcineurin-like phosphoesterase Arnit_3130 PF00072 Response regulator receiver domain Arnit_3130 PF00486 Transcriptional regulatory protein, C terminal Arnit_3131 PF00512 His Kinase A (phospho-acceptor) domain Arnit_3131 PF00672 HAMP domain Arnit_3131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_3132 PF00916 Sulfate permease family Arnit_3132 PF01740 STAS domain Arnit_3134 PF00884 Sulfatase Arnit_3134 PF08019 Phosphoethanolamine transferase EptA/EptB Arnit_3136 PF01219 Prokaryotic diacylglycerol kinase Arnit_3142 PF00486 Transcriptional regulatory protein, C terminal Arnit_3142 PF00072 Response regulator receiver domain Arnit_3143 PF00512 His Kinase A (phospho-acceptor) domain Arnit_3143 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arnit_3143 PF00672 HAMP domain Arnit_3144 PF03458 UPF0126 domain Arnit_3145 PF08448 PAS fold Arnit_3145 PF00990 Diguanylate cyclase, GGDEF domain Arnit_3147 PF00072 Response regulator receiver domain Arnit_3148 PF00551 Formyl transferase Arnit_3149 PF00892 EamA-like transporter family Arnit_3150 PF02075 Crossover junction endodeoxyribonuclease RuvC