locus-tag class description ABLL_0001 PF11638 DnaA N-terminal domain ABLL_0001 PF08299 Bacterial dnaA protein helix-turn-helix ABLL_0001 PF00308 Bacterial dnaA protein ABLL_0002 PF02767 DNA polymerase III beta subunit, central domain ABLL_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABLL_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABLL_0003 PF01751 Toprim domain ABLL_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0003 PF00986 DNA gyrase B subunit, carboxyl terminus ABLL_0003 PF00204 DNA gyrase B ABLL_0004 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABLL_0005 PF14489 QueF-like protein ABLL_0007 PF09335 SNARE associated Golgi protein ABLL_0008 PF12838 4Fe-4S dicluster domain ABLL_0009 PF10431 C-terminal, D2-small domain, of ClpB protein ABLL_0009 PF06689 ClpX C4-type zinc finger ABLL_0009 PF07724 AAA domain (Cdc48 subfamily) ABLL_0012 PF00158 Sigma-54 interaction domain ABLL_0012 PF02954 Bacterial regulatory protein, Fis family ABLL_0012 PF01590 GAF domain ABLL_0014 PF02910 Fumarate reductase flavoprotein C-term ABLL_0014 PF00890 FAD binding domain ABLL_0015 PF00248 Aldo/keto reductase family ABLL_0016 PF03459 TOBE domain ABLL_0016 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABLL_0017 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABLL_0017 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABLL_0018 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_0021 PF13649 Methyltransferase domain ABLL_0022 PF00005 ABC transporter ABLL_0025 PF00296 Luciferase-like monooxygenase ABLL_0026 PF08402 TOBE domain ABLL_0026 PF00005 ABC transporter ABLL_0027 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_0030 PF03459 TOBE domain ABLL_0030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABLL_0032 PF00148 Nitrogenase component 1 type Oxidoreductase ABLL_0034 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ABLL_0035 PF03976 Polyphosphate kinase 2 (PPK2) ABLL_0037 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0038 PF04552 Sigma-54, DNA binding domain ABLL_0038 PF04963 Sigma-54 factor, core binding domain ABLL_0038 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABLL_0039 PF00111 2Fe-2S iron-sulfur cluster binding domain ABLL_0043 PF00258 Flavodoxin ABLL_0044 PF03270 Protein of unknown function, DUF269 ABLL_0045 PF02579 Dinitrogenase iron-molybdenum cofactor ABLL_0051 PF13520 Amino acid permease ABLL_0052 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABLL_0053 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABLL_0055 PF02525 Flavodoxin-like fold ABLL_0056 PF01638 HxlR-like helix-turn-helix ABLL_0059 PF02579 Dinitrogenase iron-molybdenum cofactor ABLL_0060 PF00753 Metallo-beta-lactamase superfamily ABLL_0060 PF00258 Flavodoxin ABLL_0061 PF03466 LysR substrate binding domain ABLL_0061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABLL_0063 PF01810 LysE type translocator ABLL_0064 PF02579 Dinitrogenase iron-molybdenum cofactor ABLL_0064 PF04055 Radical SAM superfamily ABLL_0069 PF00682 HMGL-like ABLL_0075 PF00672 HAMP domain ABLL_0075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_0075 PF02203 Tar ligand binding domain homologue ABLL_0076 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_0076 PF08447 PAS fold ABLL_0077 PF00849 RNA pseudouridylate synthase ABLL_0078 PF10397 Adenylosuccinate lyase C-terminus ABLL_0078 PF00206 Lyase ABLL_0079 PF03477 ATP cone domain ABLL_0079 PF02867 Ribonucleotide reductase, barrel domain ABLL_0079 PF00317 Ribonucleotide reductase, all-alpha domain ABLL_0080 PF00268 Ribonucleotide reductase, small chain ABLL_0084 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABLL_0088 PF03063 Prismane/CO dehydrogenase family ABLL_0091 PF00691 OmpA family ABLL_0092 PF00318 Ribosomal protein S2 ABLL_0093 PF00107 Zinc-binding dehydrogenase ABLL_0093 PF08240 Alcohol dehydrogenase GroES-like domain ABLL_0094 PF01638 HxlR-like helix-turn-helix ABLL_0095 PF03649 Uncharacterised protein family (UPF0014) ABLL_0097 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABLL_0097 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABLL_0098 PF02637 GatB domain ABLL_0098 PF02934 GatB/GatE catalytic domain ABLL_0101 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABLL_0103 PF03480 Bacterial extracellular solute-binding protein, family 7 ABLL_0104 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABLL_0105 PF01575 MaoC like domain ABLL_0107 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABLL_0107 PF02770 Acyl-CoA dehydrogenase, middle domain ABLL_0107 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABLL_0108 PF02665 Nitrate reductase gamma subunit ABLL_0108 PF13183 4Fe-4S dicluster domain ABLL_0108 PF02754 Cysteine-rich domain ABLL_0109 PF01012 Electron transfer flavoprotein domain ABLL_0110 PF00766 Electron transfer flavoprotein FAD-binding domain ABLL_0110 PF01012 Electron transfer flavoprotein domain ABLL_0111 PF05724 Thiopurine S-methyltransferase (TPMT) ABLL_0112 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABLL_0112 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABLL_0113 PF03061 Thioesterase superfamily ABLL_0114 PF03061 Thioesterase superfamily ABLL_0115 PF01144 Coenzyme A transferase ABLL_0116 PF01144 Coenzyme A transferase ABLL_0117 PF02803 Thiolase, C-terminal domain ABLL_0117 PF00108 Thiolase, N-terminal domain ABLL_0118 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0118 PF00989 PAS fold ABLL_0118 PF13188 PAS domain ABLL_0118 PF13426 PAS domain ABLL_0118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0119 PF00486 Transcriptional regulatory protein, C terminal ABLL_0119 PF00072 Response regulator receiver domain ABLL_0120 PF00072 Response regulator receiver domain ABLL_0120 PF00486 Transcriptional regulatory protein, C terminal ABLL_0121 PF00989 PAS fold ABLL_0121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0121 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0122 PF02589 LUD domain ABLL_0123 PF11870 Domain of unknown function (DUF3390) ABLL_0123 PF13183 4Fe-4S dicluster domain ABLL_0123 PF02589 LUD domain ABLL_0124 PF02754 Cysteine-rich domain ABLL_0126 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABLL_0127 PF00364 Biotin-requiring enzyme ABLL_0128 PF00289 Biotin carboxylase, N-terminal domain ABLL_0128 PF02785 Biotin carboxylase C-terminal domain ABLL_0128 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABLL_0129 PF00270 DEAD/DEAH box helicase ABLL_0129 PF00271 Helicase conserved C-terminal domain ABLL_0130 PF01384 Phosphate transporter family ABLL_0132 PF00733 Asparagine synthase ABLL_0132 PF13537 Glutamine amidotransferase domain ABLL_0134 PF00881 Nitroreductase family ABLL_0135 PF03480 Bacterial extracellular solute-binding protein, family 7 ABLL_0136 PF13085 2Fe-2S iron-sulfur cluster binding domain ABLL_0136 PF13183 4Fe-4S dicluster domain ABLL_0137 PF00890 FAD binding domain ABLL_0137 PF02910 Fumarate reductase flavoprotein C-term ABLL_0139 PF02562 PhoH-like protein ABLL_0139 PF13638 PIN domain ABLL_0141 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABLL_0141 PF12002 MgsA AAA+ ATPase C terminal ABLL_0141 PF01661 Macro domain ABLL_0141 PF16193 AAA C-terminal domain ABLL_0142 PF00849 RNA pseudouridylate synthase ABLL_0142 PF01479 S4 domain ABLL_0143 PF01380 SIS domain ABLL_0143 PF00571 CBS domain ABLL_0144 PF00753 Metallo-beta-lactamase superfamily ABLL_0144 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABLL_0144 PF17770 Ribonuclease J C-terminal domain ABLL_0145 PF00398 Ribosomal RNA adenine dimethylase ABLL_0146 PF00977 Histidine biosynthesis protein ABLL_0149 PF04055 Radical SAM superfamily ABLL_0150 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABLL_0151 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABLL_0152 PF00072 Response regulator receiver domain ABLL_0152 PF00486 Transcriptional regulatory protein, C terminal ABLL_0153 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0153 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0157 PF00873 AcrB/AcrD/AcrF family ABLL_0158 PF04264 YceI-like domain ABLL_0160 PF01554 MatE ABLL_0161 PF13411 MerR HTH family regulatory protein ABLL_0162 PF00857 Isochorismatase family ABLL_0163 PF00742 Homoserine dehydrogenase ABLL_0163 PF01842 ACT domain ABLL_0163 PF03447 Homoserine dehydrogenase, NAD binding domain ABLL_0164 PF00155 Aminotransferase class I and II ABLL_0166 PF00588 SpoU rRNA Methylase family ABLL_0166 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABLL_0167 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABLL_0168 PF01197 Ribosomal protein L31 ABLL_0180 PF00437 Type II/IV secretion system protein ABLL_0186 PF02222 ATP-grasp domain ABLL_0188 PF01678 Diaminopimelate epimerase ABLL_0189 PF01121 Dephospho-CoA kinase ABLL_0190 PF17284 Spermidine synthase tetramerisation domain ABLL_0191 PF02769 AIR synthase related protein, C-terminal domain ABLL_0191 PF00586 AIR synthase related protein, N-terminal domain ABLL_0192 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABLL_0192 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABLL_0193 PF02678 Pirin ABLL_0193 PF17954 Quercetinase C-terminal cupin domain ABLL_0196 PF04264 YceI-like domain ABLL_0197 PF01047 MarR family ABLL_0198 PF00266 Aminotransferase class-V ABLL_0199 PF13393 Histidyl-tRNA synthetase ABLL_0200 PF00709 Adenylosuccinate synthetase ABLL_0202 PF00117 Glutamine amidotransferase class-I ABLL_0202 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABLL_0203 PF04608 Phosphatidylglycerophosphatase A ABLL_0205 PF02542 YgbB family ABLL_0205 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABLL_0208 PF01964 Radical SAM ThiC family ABLL_0209 PF01883 Iron-sulfur cluster assembly protein ABLL_0209 PF10609 NUBPL iron-transfer P-loop NTPase ABLL_0211 PF01502 Phosphoribosyl-AMP cyclohydrolase ABLL_0211 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABLL_0214 PF01063 Amino-transferase class IV ABLL_0216 PF00925 GTP cyclohydrolase II ABLL_0218 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABLL_0218 PF02607 B12 binding domain ABLL_0218 PF02574 Homocysteine S-methyltransferase ABLL_0218 PF00809 Pterin binding enzyme ABLL_0218 PF02310 B12 binding domain ABLL_0219 PF00892 EamA-like transporter family ABLL_0221 PF00465 Iron-containing alcohol dehydrogenase ABLL_0222 PF09997 Predicted membrane protein (DUF2238) ABLL_0223 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0223 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0225 PF00768 D-alanyl-D-alanine carboxypeptidase ABLL_0225 PF07943 Penicillin-binding protein 5, C-terminal domain ABLL_0228 PF02664 S-Ribosylhomocysteinase (LuxS) ABLL_0232 PF07273 Protein of unknown function (DUF1439) ABLL_0235 PF02405 Permease MlaE ABLL_0236 PF09383 NIL domain ABLL_0236 PF00005 ABC transporter ABLL_0240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABLL_0241 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ABLL_0241 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ABLL_0243 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ABLL_0244 PF13419 Haloacid dehalogenase-like hydrolase ABLL_0245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABLL_0246 PF00380 Ribosomal protein S9/S16 ABLL_0247 PF00572 Ribosomal protein L13 ABLL_0248 PF00989 PAS fold ABLL_0248 PF16736 Single Cache-like ABLL_0248 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0248 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0249 PF00072 Response regulator receiver domain ABLL_0249 PF00486 Transcriptional regulatory protein, C terminal ABLL_0251 PF01895 PhoU domain ABLL_0252 PF00005 ABC transporter ABLL_0253 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_0254 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_0255 PF01590 GAF domain ABLL_0255 PF00563 EAL domain ABLL_0255 PF00989 PAS fold ABLL_0255 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0256 PF12849 PBP superfamily domain ABLL_0258 PF00472 RF-1 domain ABLL_0258 PF03462 PCRF domain ABLL_0259 PF01649 Ribosomal protein S20 ABLL_0260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABLL_0260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABLL_0260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABLL_0260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABLL_0261 PF01252 Signal peptidase (SPase) II ABLL_0262 PF00330 Aconitase family (aconitate hydratase) ABLL_0263 PF12804 MobA-like NTP transferase domain ABLL_0265 PF00453 Ribosomal protein L20 ABLL_0266 PF01632 Ribosomal protein L35 ABLL_0267 PF05198 Translation initiation factor IF-3, N-terminal domain ABLL_0267 PF00707 Translation initiation factor IF-3, C-terminal domain ABLL_0268 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABLL_0268 PF03129 Anticodon binding domain ABLL_0268 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABLL_0275 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABLL_0275 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABLL_0275 PF13288 DXP reductoisomerase C-terminal domain ABLL_0279 PF00814 Glycoprotease family ABLL_0280 PF01253 Translation initiation factor SUI1 ABLL_0281 PF03853 YjeF-related protein N-terminus ABLL_0281 PF01256 Carbohydrate kinase ABLL_0282 PF03091 CutA1 divalent ion tolerance protein ABLL_0283 PF05690 Thiazole biosynthesis protein ThiG ABLL_0286 PF12833 Helix-turn-helix domain ABLL_0288 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ABLL_0292 PF01699 Sodium/calcium exchanger protein ABLL_0295 PF04851 Type III restriction enzyme, res subunit ABLL_0295 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ABLL_0295 PF00271 Helicase conserved C-terminal domain ABLL_0295 PF08463 EcoEI R protein C-terminal ABLL_0297 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0298 PF00072 Response regulator receiver domain ABLL_0298 PF00486 Transcriptional regulatory protein, C terminal ABLL_0300 PF03412 Peptidase C39 family ABLL_0300 PF00005 ABC transporter ABLL_0300 PF00664 ABC transporter transmembrane region ABLL_0301 PF13533 Biotin-lipoyl like ABLL_0304 PF02779 Transketolase, pyrimidine binding domain ABLL_0304 PF00456 Transketolase, thiamine diphosphate binding domain ABLL_0304 PF02780 Transketolase, C-terminal domain ABLL_0306 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABLL_0306 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABLL_0309 PF04172 LrgB-like family ABLL_0310 PF01022 Bacterial regulatory protein, arsR family ABLL_0312 PF02040 Arsenical pump membrane protein ABLL_0313 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABLL_0317 PF00916 Sulfate permease family ABLL_0317 PF01740 STAS domain ABLL_0323 PF00501 AMP-binding enzyme ABLL_0323 PF01553 Acyltransferase ABLL_0325 PF08335 GlnD PII-uridylyltransferase ABLL_0325 PF01966 HD domain ABLL_0327 PF02743 Cache domain ABLL_0327 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0327 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0330 PF12796 Ankyrin repeats (3 copies) ABLL_0331 PF00909 Ammonium Transporter Family ABLL_0332 PF00543 Nitrogen regulatory protein P-II ABLL_0333 PF00909 Ammonium Transporter Family ABLL_0334 PF00543 Nitrogen regulatory protein P-II ABLL_0336 PF02154 Flagellar motor switch protein FliM ABLL_0336 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABLL_0337 PF02119 Flagellar P-ring protein ABLL_0339 PF01313 Bacterial export proteins, family 3 ABLL_0344 PF02107 Flagellar L-ring protein ABLL_0346 PF02465 Flagellar hook-associated protein 2 N-terminus ABLL_0346 PF07195 Flagellar hook-associated protein 2 C-terminus ABLL_0346 PF07196 Flagellin hook IN motif ABLL_0347 PF02561 Flagellar protein FliS ABLL_0349 PF01171 PP-loop family ABLL_0350 PF04055 Radical SAM superfamily ABLL_0350 PF18693 TRAM domain ABLL_0350 PF00919 Uncharacterized protein family UPF0004 ABLL_0351 PF02569 Pantoate-beta-alanine ligase ABLL_0352 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_0354 PF01648 4'-phosphopantetheinyl transferase superfamily ABLL_0355 PF03652 Holliday junction resolvase ABLL_0358 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABLL_0359 PF01474 Class-II DAHP synthetase family ABLL_0360 PF03502 Nucleoside-specific channel-forming protein, Tsx ABLL_0362 PF03960 ArsC family ABLL_0363 PF02686 Glu-tRNAGln amidotransferase C subunit ABLL_0364 PF01702 Queuine tRNA-ribosyltransferase ABLL_0366 PF00155 Aminotransferase class I and II ABLL_0368 PF08245 Mur ligase middle domain ABLL_0368 PF02875 Mur ligase family, glutamate ligase domain ABLL_0368 PF01225 Mur ligase family, catalytic domain ABLL_0369 PF06965 Na+/H+ antiporter 1 ABLL_0371 PF04748 Divergent polysaccharide deacetylase ABLL_0372 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABLL_0372 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABLL_0373 PF00773 RNB domain ABLL_0376 PF01250 Ribosomal protein S6 ABLL_0377 PF00436 Single-strand binding protein family ABLL_0378 PF01084 Ribosomal protein S18 ABLL_0379 PF01406 tRNA synthetases class I (C) catalytic domain ABLL_0379 PF09190 DALR domain ABLL_0380 PF08529 NusA N-terminal domain ABLL_0380 PF13184 NusA-like KH domain ABLL_0382 PF04055 Radical SAM superfamily ABLL_0382 PF01938 TRAM domain ABLL_0382 PF00919 Uncharacterized protein family UPF0004 ABLL_0383 PF04028 Domain of unknown function (DUF374) ABLL_0385 PF04055 Radical SAM superfamily ABLL_0387 PF00484 Carbonic anhydrase ABLL_0388 PF00155 Aminotransferase class I and II ABLL_0389 PF02021 Uncharacterised protein family UPF0102 ABLL_0392 PF00691 OmpA family ABLL_0392 PF05736 OprF membrane domain ABLL_0393 PF02887 Pyruvate kinase, alpha/beta domain ABLL_0393 PF00391 PEP-utilising enzyme, mobile domain ABLL_0393 PF00224 Pyruvate kinase, barrel domain ABLL_0395 PF00202 Aminotransferase class-III ABLL_0397 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABLL_0397 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABLL_0398 PF00425 chorismate binding enzyme ABLL_0402 PF03591 AzlC protein ABLL_0403 PF05437 Branched-chain amino acid transport protein (AzlD) ABLL_0404 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABLL_0404 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABLL_0405 PF02504 Fatty acid synthesis protein ABLL_0406 PF01783 Ribosomal L32p protein family ABLL_0408 PF00334 Nucleoside diphosphate kinase ABLL_0409 PF00037 4Fe-4S binding domain ABLL_0410 PF00578 AhpC/TSA family ABLL_0410 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABLL_0411 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABLL_0411 PF07498 Rho termination factor, N-terminal domain ABLL_0411 PF07497 Rho termination factor, RNA-binding domain ABLL_0413 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABLL_0413 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABLL_0414 PF01177 Asp/Glu/Hydantoin racemase ABLL_0415 PF12169 DNA polymerase III subunits gamma and tau domain III ABLL_0415 PF12170 DNA polymerase III tau subunit V interacting with alpha ABLL_0415 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABLL_0417 PF03900 Porphobilinogen deaminase, C-terminal domain ABLL_0417 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABLL_0419 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0419 PF00072 Response regulator receiver domain ABLL_0420 PF04303 PrpF protein ABLL_0421 PF00694 Aconitase C-terminal domain ABLL_0421 PF00330 Aconitase family (aconitate hydratase) ABLL_0422 PF00285 Citrate synthase, C-terminal domain ABLL_0425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABLL_0425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABLL_0433 PF00570 HRDC domain ABLL_0433 PF00271 Helicase conserved C-terminal domain ABLL_0433 PF00270 DEAD/DEAH box helicase ABLL_0433 PF09382 RQC domain ABLL_0433 PF16124 RecQ zinc-binding ABLL_0435 PF01022 Bacterial regulatory protein, arsR family ABLL_0436 PF00403 Heavy-metal-associated domain ABLL_0439 PF01863 Protein of unknown function DUF45 ABLL_0440 PF00350 Dynamin family ABLL_0441 PF00350 Dynamin family ABLL_0442 PF13183 4Fe-4S dicluster domain ABLL_0442 PF13085 2Fe-2S iron-sulfur cluster binding domain ABLL_0443 PF00890 FAD binding domain ABLL_0443 PF02910 Fumarate reductase flavoprotein C-term ABLL_0444 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABLL_0445 PF00361 Proton-conducting membrane transporter ABLL_0446 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ABLL_0446 PF00361 Proton-conducting membrane transporter ABLL_0447 PF00361 Proton-conducting membrane transporter ABLL_0447 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABLL_0448 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABLL_0449 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABLL_0450 PF12838 4Fe-4S dicluster domain ABLL_0451 PF00146 NADH dehydrogenase ABLL_0452 PF00384 Molybdopterin oxidoreductase ABLL_0452 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABLL_0452 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ABLL_0453 PF00285 Citrate synthase, C-terminal domain ABLL_0454 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABLL_0454 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABLL_0454 PF10531 SLBB domain ABLL_0456 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABLL_0456 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABLL_0457 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABLL_0458 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABLL_0459 PF00155 Aminotransferase class I and II ABLL_0460 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ABLL_0461 PF06738 Putative threonine/serine exporter ABLL_0461 PF12821 Threonine/Serine exporter, ThrE ABLL_0462 PF06738 Putative threonine/serine exporter ABLL_0464 PF03309 Type III pantothenate kinase ABLL_0465 PF01634 ATP phosphoribosyltransferase ABLL_0468 PF00072 Response regulator receiver domain ABLL_0469 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABLL_0469 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0469 PF00672 HAMP domain ABLL_0469 PF00072 Response regulator receiver domain ABLL_0469 PF01627 Hpt domain ABLL_0469 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0470 PF13581 Histidine kinase-like ATPase domain ABLL_0470 PF07536 HWE histidine kinase ABLL_0470 PF13426 PAS domain ABLL_0471 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0471 PF08448 PAS fold ABLL_0472 PF00579 tRNA synthetases class I (W and Y) ABLL_0474 PF13649 Methyltransferase domain ABLL_0475 PF00593 TonB dependent receptor ABLL_0475 PF07715 TonB-dependent Receptor Plug Domain ABLL_0479 PF01545 Cation efflux family ABLL_0479 PF16916 Dimerisation domain of Zinc Transporter ABLL_0481 PF02403 Seryl-tRNA synthetase N-terminal domain ABLL_0481 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABLL_0482 PF09423 PhoD-like phosphatase ABLL_0482 PF16655 PhoD-like phosphatase, N-terminal domain ABLL_0485 PF08447 PAS fold ABLL_0485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_0489 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ABLL_0490 PF12801 4Fe-4S binding domain ABLL_0490 PF00037 4Fe-4S binding domain ABLL_0491 PF12838 4Fe-4S dicluster domain ABLL_0491 PF12800 4Fe-4S binding domain ABLL_0492 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABLL_0492 PF00384 Molybdopterin oxidoreductase ABLL_0492 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABLL_0492 PF01568 Molydopterin dinucleotide binding domain ABLL_0493 PF08495 FIST N domain ABLL_0493 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0493 PF10442 FIST C domain ABLL_0493 PF00563 EAL domain ABLL_0494 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABLL_0497 PF00591 Glycosyl transferase family, a/b domain ABLL_0497 PF02885 Glycosyl transferase family, helical bundle domain ABLL_0498 PF06463 Molybdenum Cofactor Synthesis C ABLL_0498 PF04055 Radical SAM superfamily ABLL_0499 PF00312 Ribosomal protein S15 ABLL_0502 PF13380 CoA binding domain ABLL_0503 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0503 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0503 PF08521 Two-component sensor kinase N-terminal ABLL_0504 PF00486 Transcriptional regulatory protein, C terminal ABLL_0504 PF00072 Response regulator receiver domain ABLL_0505 PF00639 PPIC-type PPIASE domain ABLL_0506 PF01116 Fructose-bisphosphate aldolase class-II ABLL_0507 PF00486 Transcriptional regulatory protein, C terminal ABLL_0507 PF00072 Response regulator receiver domain ABLL_0509 PF00171 Aldehyde dehydrogenase family ABLL_0511 PF02472 Biopolymer transport protein ExbD/TolR ABLL_0512 PF01618 MotA/TolQ/ExbB proton channel family ABLL_0514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0514 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0515 PF03707 Bacterial signalling protein N terminal repeat ABLL_0515 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0515 PF00563 EAL domain ABLL_0516 PF01202 Shikimate kinase ABLL_0517 PF00815 Histidinol dehydrogenase ABLL_0519 PF00348 Polyprenyl synthetase ABLL_0520 PF01488 Shikimate / quinate 5-dehydrogenase ABLL_0520 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABLL_0520 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABLL_0521 PF04073 Aminoacyl-tRNA editing domain ABLL_0521 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABLL_0521 PF03129 Anticodon binding domain ABLL_0522 PF00924 Mechanosensitive ion channel ABLL_0522 PF05552 Conserved TM helix ABLL_0523 PF01743 Poly A polymerase head domain ABLL_0523 PF12627 Probable RNA and SrmB- binding site of polymerase A ABLL_0523 PF01966 HD domain ABLL_0527 PF02699 Preprotein translocase subunit ABLL_0528 PF02355 Protein export membrane protein ABLL_0529 PF02355 Protein export membrane protein ABLL_0529 PF07549 SecD/SecF GG Motif ABLL_0532 PF00133 tRNA synthetases class I (I, L, M and V) ABLL_0532 PF13603 Leucyl-tRNA synthetase, Domain 2 ABLL_0532 PF09334 tRNA synthetases class I (M) ABLL_0534 PF08245 Mur ligase middle domain ABLL_0536 PF00999 Sodium/hydrogen exchanger family ABLL_0536 PF02254 TrkA-N domain ABLL_0541 PF03824 High-affinity nickel-transport protein ABLL_0545 PF04286 Protein of unknown function (DUF445) ABLL_0548 PF02559 CarD-like/TRCF domain ABLL_0548 PF00270 DEAD/DEAH box helicase ABLL_0548 PF00271 Helicase conserved C-terminal domain ABLL_0548 PF17757 UvrB interaction domain ABLL_0548 PF03461 TRCF domain ABLL_0553 PF01590 GAF domain ABLL_0553 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0553 PF00360 Phytochrome region ABLL_0553 PF00563 EAL domain ABLL_0556 PF00072 Response regulator receiver domain ABLL_0556 PF00486 Transcriptional regulatory protein, C terminal ABLL_0557 PF08521 Two-component sensor kinase N-terminal ABLL_0557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0557 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0559 PF00672 HAMP domain ABLL_0559 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_0559 PF02743 Cache domain ABLL_0560 PF00072 Response regulator receiver domain ABLL_0560 PF08769 Sporulation initiation factor Spo0A C terminal ABLL_0561 PF08447 PAS fold ABLL_0561 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_0562 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0562 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0563 PF13277 YmdB-like protein ABLL_0566 PF01209 ubiE/COQ5 methyltransferase family ABLL_0567 PF02601 Exonuclease VII, large subunit ABLL_0567 PF13742 OB-fold nucleic acid binding domain ABLL_0568 PF01584 CheW-like domain ABLL_0569 PF02954 Bacterial regulatory protein, Fis family ABLL_0569 PF00072 Response regulator receiver domain ABLL_0569 PF00158 Sigma-54 interaction domain ABLL_0570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABLL_0572 PF02261 Aspartate decarboxylase ABLL_0573 PF02575 YbaB/EbfC DNA-binding family ABLL_0574 PF00348 Polyprenyl synthetase ABLL_0575 PF00166 Chaperonin 10 Kd subunit ABLL_0576 PF00118 TCP-1/cpn60 chaperonin family ABLL_0578 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0578 PF00672 HAMP domain ABLL_0578 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0579 PF00072 Response regulator receiver domain ABLL_0579 PF00486 Transcriptional regulatory protein, C terminal ABLL_0580 PF00149 Calcineurin-like phosphoesterase ABLL_0582 PF04264 YceI-like domain ABLL_0585 PF00005 ABC transporter ABLL_0587 PF00459 Inositol monophosphatase family ABLL_0588 PF01380 SIS domain ABLL_0591 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABLL_0591 PF02772 S-adenosylmethionine synthetase, central domain ABLL_0591 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABLL_0592 PF17848 Acetyl-coA carboxylase zinc finger domain ABLL_0592 PF01039 Carboxyl transferase domain ABLL_0593 PF02581 Thiamine monophosphate synthase ABLL_0594 PF02590 Predicted SPOUT methyltransferase ABLL_0596 PF01207 Dihydrouridine synthase (Dus) ABLL_0598 PF00004 ATPase family associated with various cellular activities (AAA) ABLL_0598 PF17862 AAA+ lid domain ABLL_0598 PF01434 Peptidase family M41 ABLL_0599 PF11849 Domain of unknown function (DUF3369) ABLL_0600 PF00072 Response regulator receiver domain ABLL_0600 PF13426 PAS domain ABLL_0600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0601 PF00682 HMGL-like ABLL_0601 PF08502 LeuA allosteric (dimerisation) domain ABLL_0602 PF07556 Protein of unknown function (DUF1538) ABLL_0603 PF00085 Thioredoxin ABLL_0605 PF05190 MutS family domain IV ABLL_0605 PF00488 MutS domain V ABLL_0605 PF01624 MutS domain I ABLL_0605 PF05192 MutS domain III ABLL_0605 PF05188 MutS domain II ABLL_0609 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit ABLL_0611 PF00005 ABC transporter ABLL_0611 PF00664 ABC transporter transmembrane region ABLL_0613 PF01266 FAD dependent oxidoreductase ABLL_0614 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0615 PF00977 Histidine biosynthesis protein ABLL_0616 PF01370 NAD dependent epimerase/dehydratase family ABLL_0616 PF08338 Domain of unknown function (DUF1731) ABLL_0617 PF00117 Glutamine amidotransferase class-I ABLL_0620 PF03144 Elongation factor Tu domain 2 ABLL_0620 PF00009 Elongation factor Tu GTP binding domain ABLL_0620 PF00679 Elongation factor G C-terminus ABLL_0620 PF06421 GTP-binding protein LepA C-terminus ABLL_0621 PF05736 OprF membrane domain ABLL_0621 PF00691 OmpA family ABLL_0622 PF00691 OmpA family ABLL_0622 PF05736 OprF membrane domain ABLL_0623 PF14572 Phosphoribosyl synthetase-associated domain ABLL_0623 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABLL_0626 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABLL_0627 PF00557 Metallopeptidase family M24 ABLL_0627 PF01321 Creatinase/Prolidase N-terminal domain ABLL_0628 PF01220 Dehydroquinase class II ABLL_0629 PF01979 Amidohydrolase family ABLL_0630 PF01343 Peptidase family S49 ABLL_0631 PF00871 Acetokinase family ABLL_0632 PF01515 Phosphate acetyl/butaryl transferase ABLL_0633 PF00871 Acetokinase family ABLL_0634 PF00871 Acetokinase family ABLL_0635 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABLL_0635 PF14579 Helix-hairpin-helix motif ABLL_0635 PF02811 PHP domain ABLL_0635 PF11490 DNA polymerase III polC-type N-terminus II ABLL_0635 PF14480 DNA polymerase III polC-type N-terminus I ABLL_0635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABLL_0635 PF00929 Exonuclease ABLL_0637 PF00474 Sodium:solute symporter family ABLL_0639 PF00474 Sodium:solute symporter family ABLL_0641 PF00929 Exonuclease ABLL_0643 PF00474 Sodium:solute symporter family ABLL_0645 PF00072 Response regulator receiver domain ABLL_0645 PF00486 Transcriptional regulatory protein, C terminal ABLL_0646 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0646 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0647 PF02464 Competence-damaged protein ABLL_0647 PF18146 Damage-inducible protein CinA KH domain ABLL_0647 PF00994 Probable molybdopterin binding domain ABLL_0648 PF06039 Malate:quinone oxidoreductase (Mqo) ABLL_0649 PF08264 Anticodon-binding domain of tRNA ABLL_0649 PF00133 tRNA synthetases class I (I, L, M and V) ABLL_0652 PF02875 Mur ligase family, glutamate ligase domain ABLL_0652 PF08245 Mur ligase middle domain ABLL_0654 PF08448 PAS fold ABLL_0654 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0654 PF00072 Response regulator receiver domain ABLL_0654 PF13188 PAS domain ABLL_0657 PF01882 Protein of unknown function DUF58 ABLL_0658 PF17863 AAA lid domain ABLL_0658 PF07726 ATPase family associated with various cellular activities (AAA) ABLL_0659 PF00318 Ribosomal protein S2 ABLL_0660 PF00889 Elongation factor TS ABLL_0661 PF00005 ABC transporter ABLL_0663 PF00625 Guanylate kinase ABLL_0664 PF00563 EAL domain ABLL_0664 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0664 PF08448 PAS fold ABLL_0665 PF00403 Heavy-metal-associated domain ABLL_0668 PF00005 ABC transporter ABLL_0668 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABLL_0669 PF00762 Ferrochelatase ABLL_0672 PF01875 Memo-like protein ABLL_0674 PF00005 ABC transporter ABLL_0675 PF00950 ABC 3 transport family ABLL_0678 PF17783 CvfB-like winged helix domain ABLL_0678 PF13509 S1 domain ABLL_0679 PF08534 Redoxin ABLL_0680 PF08238 Sel1 repeat ABLL_0680 PF13181 Tetratricopeptide repeat ABLL_0682 PF00174 Oxidoreductase molybdopterin binding domain ABLL_0683 PF01794 Ferric reductase like transmembrane component ABLL_0684 PF13361 UvrD-like helicase C-terminal domain ABLL_0684 PF00580 UvrD/REP helicase N-terminal domain ABLL_0685 PF02254 TrkA-N domain ABLL_0685 PF00999 Sodium/hydrogen exchanger family ABLL_0685 PF02080 TrkA-C domain ABLL_0686 PF00174 Oxidoreductase molybdopterin binding domain ABLL_0698 PF01614 Bacterial transcriptional regulator ABLL_0698 PF09339 IclR helix-turn-helix domain ABLL_0699 PF01965 DJ-1/PfpI family ABLL_0700 PF00753 Metallo-beta-lactamase superfamily ABLL_0703 PF00133 tRNA synthetases class I (I, L, M and V) ABLL_0703 PF10458 Valyl tRNA synthetase tRNA binding arm ABLL_0703 PF08264 Anticodon-binding domain of tRNA ABLL_0704 PF01554 MatE ABLL_0706 PF09962 Uncharacterized conserved protein (DUF2196) ABLL_0707 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABLL_0711 PF07690 Major Facilitator Superfamily ABLL_0712 PF01725 Ham1 family ABLL_0714 PF00072 Response regulator receiver domain ABLL_0714 PF00196 Bacterial regulatory proteins, luxR family ABLL_0716 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ABLL_0716 PF08479 POTRA domain, ShlB-type ABLL_0720 PF03807 NADP oxidoreductase coenzyme F420-dependent ABLL_0720 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABLL_0721 PF13525 Outer membrane lipoprotein ABLL_0722 PF05362 Lon protease (S16) C-terminal proteolytic domain ABLL_0722 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABLL_0722 PF00004 ATPase family associated with various cellular activities (AAA) ABLL_0727 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABLL_0728 PF13426 PAS domain ABLL_0728 PF08447 PAS fold ABLL_0728 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_0729 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABLL_0730 PF00440 Bacterial regulatory proteins, tetR family ABLL_0730 PF17932 Tetracyclin repressor-like, C-terminal domain ABLL_0731 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABLL_0732 PF00873 AcrB/AcrD/AcrF family ABLL_0734 PF00892 EamA-like transporter family ABLL_0735 PF02203 Tar ligand binding domain homologue ABLL_0735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_0735 PF00672 HAMP domain ABLL_0736 PF00563 EAL domain ABLL_0736 PF05231 MASE1 ABLL_0738 PF00289 Biotin carboxylase, N-terminal domain ABLL_0738 PF02785 Biotin carboxylase C-terminal domain ABLL_0738 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABLL_0739 PF08212 Lipocalin-like domain ABLL_0740 PF02567 Phenazine biosynthesis-like protein ABLL_0744 PF01883 Iron-sulfur cluster assembly protein ABLL_0745 PF02657 Fe-S metabolism associated domain ABLL_0746 PF00266 Aminotransferase class-V ABLL_0748 PF00005 ABC transporter ABLL_0749 PF01458 Uncharacterized protein family (UPF0051) ABLL_0750 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0750 PF08448 PAS fold ABLL_0750 PF00072 Response regulator receiver domain ABLL_0750 PF13188 PAS domain ABLL_0750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0751 PF01740 STAS domain ABLL_0751 PF13426 PAS domain ABLL_0752 PF00266 Aminotransferase class-V ABLL_0753 PF04324 BFD-like [2Fe-2S] binding domain ABLL_0753 PF01106 NifU-like domain ABLL_0753 PF01592 NifU-like N terminal domain ABLL_0757 PF00571 CBS domain ABLL_0757 PF01769 Divalent cation transporter ABLL_0757 PF03448 MgtE intracellular N domain ABLL_0758 PF01925 Sulfite exporter TauE/SafE ABLL_0759 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0759 PF07694 5TMR of 5TMR-LYT ABLL_0763 PF00206 Lyase ABLL_0763 PF14698 Argininosuccinate lyase C-terminal ABLL_0764 PF01339 CheB methylesterase ABLL_0764 PF00072 Response regulator receiver domain ABLL_0765 PF00899 ThiF family ABLL_0766 PF03449 Transcription elongation factor, N-terminal ABLL_0766 PF01272 Transcription elongation factor, GreA/GreB, C-term ABLL_0769 PF12344 Ultra-violet resistance protein B ABLL_0769 PF02151 UvrB/uvrC motif ABLL_0769 PF04851 Type III restriction enzyme, res subunit ABLL_0769 PF17757 UvrB interaction domain ABLL_0769 PF00271 Helicase conserved C-terminal domain ABLL_0770 PF10576 Iron-sulfur binding domain of endonuclease III ABLL_0770 PF00633 Helix-hairpin-helix motif ABLL_0770 PF00730 HhH-GPD superfamily base excision DNA repair protein ABLL_0772 PF01266 FAD dependent oxidoreductase ABLL_0772 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABLL_0777 PF02502 Ribose/Galactose Isomerase ABLL_0778 PF10502 Signal peptidase, peptidase S26 ABLL_0779 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABLL_0779 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABLL_0780 PF01386 Ribosomal L25p family ABLL_0780 PF14693 Ribosomal protein TL5, C-terminal domain ABLL_0781 PF01195 Peptidyl-tRNA hydrolase ABLL_0784 PF01520 N-acetylmuramoyl-L-alanine amidase ABLL_0786 PF00579 tRNA synthetases class I (W and Y) ABLL_0786 PF01479 S4 domain ABLL_0787 PF02824 TGS domain ABLL_0787 PF13291 ACT domain ABLL_0787 PF04607 Region found in RelA / SpoT proteins ABLL_0788 PF01192 RNA polymerase Rpb6 ABLL_0789 PF00696 Amino acid kinase family ABLL_0791 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABLL_0792 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABLL_0793 PF00425 chorismate binding enzyme ABLL_0793 PF04715 Anthranilate synthase component I, N terminal region ABLL_0795 PF00464 Serine hydroxymethyltransferase ABLL_0796 PF00152 tRNA synthetases class II (D, K and N) ABLL_0796 PF01336 OB-fold nucleic acid binding domain ABLL_0798 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0798 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0798 PF00989 PAS fold ABLL_0798 PF08447 PAS fold ABLL_0799 PF04551 GcpE protein ABLL_0800 PF00990 Diguanylate cyclase, GGDEF domain ABLL_0800 PF17151 Periplasmic sensor domain ABLL_0801 PF00772 DnaB-like helicase N terminal domain ABLL_0801 PF03796 DnaB-like helicase C terminal domain ABLL_0804 PF16363 GDP-mannose 4,6 dehydratase ABLL_0805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABLL_0805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABLL_0806 PF02719 Polysaccharide biosynthesis protein ABLL_0807 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABLL_0809 PF08666 SAF domain ABLL_0809 PF03102 NeuB family ABLL_0810 PF02350 UDP-N-acetylglucosamine 2-epimerase ABLL_0811 PF00977 Histidine biosynthesis protein ABLL_0812 PF00117 Glutamine amidotransferase class-I ABLL_0814 PF00483 Nucleotidyl transferase ABLL_0815 PF02348 Cytidylyltransferase ABLL_0820 PF01757 Acyltransferase family ABLL_0822 PF00535 Glycosyl transferase family 2 ABLL_0823 PF00953 Glycosyl transferase family 4 ABLL_0824 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ABLL_0825 PF02719 Polysaccharide biosynthesis protein ABLL_0827 PF14743 DNA ligase OB-like domain ABLL_0827 PF01068 ATP dependent DNA ligase domain ABLL_0828 PF00156 Phosphoribosyl transferase domain ABLL_0829 PF00291 Pyridoxal-phosphate dependent enzyme ABLL_0831 PF00883 Cytosol aminopeptidase family, catalytic domain ABLL_0831 PF02789 Cytosol aminopeptidase family, N-terminal domain ABLL_0832 PF02472 Biopolymer transport protein ExbD/TolR ABLL_0833 PF01618 MotA/TolQ/ExbB proton channel family ABLL_0837 PF00005 ABC transporter ABLL_0837 PF12704 MacB-like periplasmic core domain ABLL_0837 PF02687 FtsX-like permease family ABLL_0838 PF00005 ABC transporter ABLL_0838 PF12704 MacB-like periplasmic core domain ABLL_0838 PF02687 FtsX-like permease family ABLL_0847 PF01475 Ferric uptake regulator family ABLL_0849 PF10415 Fumarase C C-terminus ABLL_0849 PF00206 Lyase ABLL_0851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_0851 PF00989 PAS fold ABLL_0851 PF00512 His Kinase A (phospho-acceptor) domain ABLL_0852 PF00072 Response regulator receiver domain ABLL_0852 PF00486 Transcriptional regulatory protein, C terminal ABLL_0855 PF00873 AcrB/AcrD/AcrF family ABLL_0857 PF00593 TonB dependent receptor ABLL_0857 PF07715 TonB-dependent Receptor Plug Domain ABLL_0863 PF07670 Nucleoside recognition ABLL_0863 PF17910 FeoB cytosolic helical domain ABLL_0863 PF02421 Ferrous iron transport protein B ABLL_0863 PF07664 Ferrous iron transport protein B C terminus ABLL_0863 PF04023 FeoA domain ABLL_0864 PF04023 FeoA domain ABLL_0865 PF00593 TonB dependent receptor ABLL_0865 PF07715 TonB-dependent Receptor Plug Domain ABLL_0866 PF00756 Putative esterase ABLL_0867 PF13581 Histidine kinase-like ATPase domain ABLL_0867 PF07568 Histidine kinase ABLL_0867 PF13426 PAS domain ABLL_0868 PF00072 Response regulator receiver domain ABLL_0869 PF07715 TonB-dependent Receptor Plug Domain ABLL_0869 PF00593 TonB dependent receptor ABLL_0872 PF13276 HTH-like domain ABLL_0872 PF00665 Integrase core domain ABLL_0872 PF13333 Integrase core domain ABLL_0876 PF13333 Integrase core domain ABLL_0876 PF13276 HTH-like domain ABLL_0876 PF00665 Integrase core domain ABLL_0877 PF00072 Response regulator receiver domain ABLL_0877 PF00486 Transcriptional regulatory protein, C terminal ABLL_0881 PF08479 POTRA domain, ShlB-type ABLL_0881 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ABLL_0884 PF00270 DEAD/DEAH box helicase ABLL_0884 PF00271 Helicase conserved C-terminal domain ABLL_0884 PF16124 RecQ zinc-binding ABLL_0884 PF00570 HRDC domain ABLL_0884 PF09382 RQC domain ABLL_0885 PF01966 HD domain ABLL_0887 PF13086 AAA domain ABLL_0887 PF13195 Protein of unknown function (DUF4011) ABLL_0887 PF13087 AAA domain ABLL_0894 PF13476 AAA domain ABLL_0895 PF12320 Type 5 capsule protein repressor C-terminal domain ABLL_0895 PF00149 Calcineurin-like phosphoesterase ABLL_0896 PF00239 Resolvase, N terminal domain ABLL_0896 PF02796 Helix-turn-helix domain of resolvase ABLL_0898 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABLL_0898 PF00056 lactate/malate dehydrogenase, NAD binding domain ABLL_0899 PF07411 Domain of unknown function (DUF1508) ABLL_0900 PF01381 Helix-turn-helix ABLL_0900 PF00717 Peptidase S24-like ABLL_0915 PF13173 AAA domain ABLL_0915 PF13635 Domain of unknown function (DUF4143) ABLL_0922 PF01926 50S ribosome-binding GTPase ABLL_0922 PF06071 Protein of unknown function (DUF933) ABLL_0926 PF06865 Pyrimidine/purine nucleoside phosphorylase ABLL_0929 PF00589 Phage integrase family ABLL_0929 PF02899 Phage integrase, N-terminal SAM-like domain ABLL_0934 PF00069 Protein kinase domain ABLL_0934 PF03793 PASTA domain ABLL_0935 PF00069 Protein kinase domain ABLL_0935 PF03793 PASTA domain ABLL_0938 PF00149 Calcineurin-like phosphoesterase ABLL_0941 PF01381 Helix-turn-helix ABLL_0959 PF00586 AIR synthase related protein, N-terminal domain ABLL_0959 PF02769 AIR synthase related protein, C-terminal domain ABLL_0960 PF01142 tRNA pseudouridine synthase D (TruD) ABLL_0962 PF00593 TonB dependent receptor ABLL_0962 PF07715 TonB-dependent Receptor Plug Domain ABLL_0963 PF02203 Tar ligand binding domain homologue ABLL_0963 PF00672 HAMP domain ABLL_0963 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_0964 PF07499 RuvA, C-terminal domain ABLL_0964 PF01330 RuvA N terminal domain ABLL_0965 PF01820 D-ala D-ala ligase N-terminus ABLL_0965 PF07478 D-ala D-ala ligase C-terminus ABLL_0967 PF02875 Mur ligase family, glutamate ligase domain ABLL_0967 PF08245 Mur ligase middle domain ABLL_0967 PF01225 Mur ligase family, catalytic domain ABLL_0968 PF01230 HIT domain ABLL_0969 PF01638 HxlR-like helix-turn-helix ABLL_0970 PF00881 Nitroreductase family ABLL_0972 PF01266 FAD dependent oxidoreductase ABLL_0973 PF00338 Ribosomal protein S10p/S20e ABLL_0974 PF00297 Ribosomal protein L3 ABLL_0975 PF00573 Ribosomal protein L4/L1 family ABLL_0976 PF00276 Ribosomal protein L23 ABLL_0977 PF03947 Ribosomal Proteins L2, C-terminal domain ABLL_0977 PF00181 Ribosomal Proteins L2, RNA binding domain ABLL_0978 PF00203 Ribosomal protein S19 ABLL_0979 PF00237 Ribosomal protein L22p/L17e ABLL_0980 PF00189 Ribosomal protein S3, C-terminal domain ABLL_0980 PF07650 KH domain ABLL_0981 PF00252 Ribosomal protein L16p/L10e ABLL_0982 PF00831 Ribosomal L29 protein ABLL_0983 PF00366 Ribosomal protein S17 ABLL_0984 PF00238 Ribosomal protein L14p/L23e ABLL_0985 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABLL_0985 PF00467 KOW motif ABLL_0986 PF00673 ribosomal L5P family C-terminus ABLL_0986 PF00281 Ribosomal protein L5 ABLL_0987 PF00253 Ribosomal protein S14p/S29e ABLL_0988 PF00410 Ribosomal protein S8 ABLL_0989 PF00347 Ribosomal protein L6 ABLL_0990 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABLL_0991 PF00333 Ribosomal protein S5, N-terminal domain ABLL_0991 PF03719 Ribosomal protein S5, C-terminal domain ABLL_0992 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABLL_0993 PF00344 SecY translocase ABLL_0994 PF00557 Metallopeptidase family M24 ABLL_0995 PF01176 Translation initiation factor 1A / IF-1 ABLL_0997 PF03167 Uracil DNA glycosylase superfamily ABLL_0999 PF02938 GAD domain ABLL_0999 PF01336 OB-fold nucleic acid binding domain ABLL_0999 PF00152 tRNA synthetases class II (D, K and N) ABLL_1002 PF04055 Radical SAM superfamily ABLL_1002 PF08497 Radical SAM N-terminal ABLL_1003 PF05191 Adenylate kinase, active site lid ABLL_1007 PF01168 Alanine racemase, N-terminal domain ABLL_1007 PF00842 Alanine racemase, C-terminal domain ABLL_1008 PF01541 GIY-YIG catalytic domain ABLL_1008 PF02151 UvrB/uvrC motif ABLL_1008 PF08459 UvrC Helix-hairpin-helix N-terminal ABLL_1010 PF17158 Membrane-associated sensor, integral membrane domain ABLL_1010 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1012 PF04973 Nicotinamide mononucleotide transporter ABLL_1013 PF00255 Glutathione peroxidase ABLL_1014 PF00672 HAMP domain ABLL_1014 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1015 PF00672 HAMP domain ABLL_1015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1015 PF02203 Tar ligand binding domain homologue ABLL_1016 PF00672 HAMP domain ABLL_1016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1016 PF02203 Tar ligand binding domain homologue ABLL_1017 PF02203 Tar ligand binding domain homologue ABLL_1017 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1017 PF00672 HAMP domain ABLL_1020 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1020 PF00072 Response regulator receiver domain ABLL_1021 PF00072 Response regulator receiver domain ABLL_1021 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1021 PF09308 LuxQ, periplasmic ABLL_1024 PF13344 Haloacid dehalogenase-like hydrolase ABLL_1024 PF00293 NUDIX domain ABLL_1027 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABLL_1029 PF03480 Bacterial extracellular solute-binding protein, family 7 ABLL_1030 PF04115 Ureidoglycolate lyase ABLL_1032 PF02653 Branched-chain amino acid transport system / permease component ABLL_1034 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABLL_1034 PF00005 ABC transporter ABLL_1035 PF00005 ABC transporter ABLL_1036 PF01774 UreD urease accessory protein ABLL_1037 PF13458 Periplasmic binding protein ABLL_1038 PF02653 Branched-chain amino acid transport system / permease component ABLL_1039 PF02653 Branched-chain amino acid transport system / permease component ABLL_1039 PF11862 Domain of unknown function (DUF3382) ABLL_1040 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABLL_1040 PF00005 ABC transporter ABLL_1041 PF00005 ABC transporter ABLL_1042 PF01177 Asp/Glu/Hydantoin racemase ABLL_1045 PF03561 Allantoicase repeat ABLL_1046 PF04115 Ureidoglycolate lyase ABLL_1047 PF01274 Malate synthase ABLL_1048 PF00699 Urease beta subunit ABLL_1048 PF00547 Urease, gamma subunit ABLL_1049 PF00449 Urease alpha-subunit, N-terminal domain ABLL_1049 PF01979 Amidohydrolase family ABLL_1050 PF05194 UreE urease accessory protein, C-terminal domain ABLL_1052 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABLL_1054 PF08360 QacR-like protein, C-terminal region ABLL_1054 PF00440 Bacterial regulatory proteins, tetR family ABLL_1055 PF00873 AcrB/AcrD/AcrF family ABLL_1056 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABLL_1058 PF01047 MarR family ABLL_1060 PF08448 PAS fold ABLL_1060 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1061 PF03372 Endonuclease/Exonuclease/phosphatase family ABLL_1068 PF00342 Phosphoglucose isomerase ABLL_1069 PF00483 Nucleotidyl transferase ABLL_1070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABLL_1070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABLL_1070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABLL_1070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABLL_1071 PF00860 Permease family ABLL_1072 PF00156 Phosphoribosyl transferase domain ABLL_1074 PF04241 Protein of unknown function (DUF423) ABLL_1077 PF00860 Permease family ABLL_1078 PF04461 Protein of unknown function (DUF520) ABLL_1080 PF00486 Transcriptional regulatory protein, C terminal ABLL_1080 PF00072 Response regulator receiver domain ABLL_1081 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1081 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1082 PF00293 NUDIX domain ABLL_1084 PF02253 Phospholipase A1 ABLL_1085 PF00834 Ribulose-phosphate 3 epimerase family ABLL_1086 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABLL_1087 PF14480 DNA polymerase III polC-type N-terminus I ABLL_1087 PF00929 Exonuclease ABLL_1087 PF11490 DNA polymerase III polC-type N-terminus II ABLL_1087 PF02811 PHP domain ABLL_1087 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABLL_1087 PF14579 Helix-hairpin-helix motif ABLL_1087 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABLL_1088 PF02824 TGS domain ABLL_1088 PF13291 ACT domain ABLL_1088 PF04607 Region found in RelA / SpoT proteins ABLL_1090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABLL_1091 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ABLL_1091 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ABLL_1091 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ABLL_1093 PF05175 Methyltransferase small domain ABLL_1094 PF03692 Putative zinc- or iron-chelating domain ABLL_1096 PF00218 Indole-3-glycerol phosphate synthase ABLL_1097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABLL_1097 PF03466 LysR substrate binding domain ABLL_1099 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1099 PF08447 PAS fold ABLL_1100 PF00672 HAMP domain ABLL_1100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1100 PF02203 Tar ligand binding domain homologue ABLL_1101 PF01168 Alanine racemase, N-terminal domain ABLL_1102 PF17820 PDZ domain ABLL_1102 PF02163 Peptidase family M50 ABLL_1103 PF01066 CDP-alcohol phosphatidyltransferase ABLL_1105 PF00701 Dihydrodipicolinate synthetase family ABLL_1108 PF01180 Dihydroorotate dehydrogenase ABLL_1109 PF00005 ABC transporter ABLL_1109 PF00664 ABC transporter transmembrane region ABLL_1110 PF03023 Lipid II flippase MurJ ABLL_1112 PF02915 Rubrerythrin ABLL_1114 PF02130 Uncharacterized protein family UPF0054 ABLL_1115 PF18073 Rubredoxin metal binding domain ABLL_1119 PF03797 Autotransporter beta-domain ABLL_1123 PF14376 Haem-binding domain ABLL_1123 PF00034 Cytochrome c ABLL_1123 PF03150 Di-haem cytochrome c peroxidase ABLL_1124 PF03707 Bacterial signalling protein N terminal repeat ABLL_1124 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1124 PF00563 EAL domain ABLL_1126 PF00448 SRP54-type protein, GTPase domain ABLL_1127 PF00578 AhpC/TSA family ABLL_1128 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABLL_1129 PF01966 HD domain ABLL_1129 PF12072 Domain of unknown function (DUF3552) ABLL_1129 PF00013 KH domain ABLL_1131 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_1131 PF12911 N-terminal TM domain of oligopeptide transport permease C ABLL_1133 PF00106 short chain dehydrogenase ABLL_1136 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABLL_1138 PF00486 Transcriptional regulatory protein, C terminal ABLL_1138 PF00072 Response regulator receiver domain ABLL_1139 PF13426 PAS domain ABLL_1139 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1139 PF00672 HAMP domain ABLL_1139 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1141 PF17151 Periplasmic sensor domain ABLL_1141 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1142 PF09424 Yqey-like protein ABLL_1144 PF16916 Dimerisation domain of Zinc Transporter ABLL_1144 PF01545 Cation efflux family ABLL_1145 PF00155 Aminotransferase class I and II ABLL_1146 PF01863 Protein of unknown function DUF45 ABLL_1148 PF00890 FAD binding domain ABLL_1148 PF02910 Fumarate reductase flavoprotein C-term ABLL_1149 PF03600 Citrate transporter ABLL_1150 PF00117 Glutamine amidotransferase class-I ABLL_1150 PF00958 GMP synthase C terminal domain ABLL_1150 PF02540 NAD synthase ABLL_1152 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABLL_1153 PF17760 UvrA interaction domain ABLL_1153 PF17755 UvrA DNA-binding domain ABLL_1158 PF13649 Methyltransferase domain ABLL_1164 PF00561 alpha/beta hydrolase fold ABLL_1165 PF01553 Acyltransferase ABLL_1166 PF17746 SfsA N-terminal OB domain ABLL_1166 PF03749 Sugar fermentation stimulation protein RE domain ABLL_1167 PF13520 Amino acid permease ABLL_1171 PF03062 MBOAT, membrane-bound O-acyltransferase family ABLL_1172 PF00849 RNA pseudouridylate synthase ABLL_1175 PF03960 ArsC family ABLL_1176 PF01272 Transcription elongation factor, GreA/GreB, C-term ABLL_1176 PF03449 Transcription elongation factor, N-terminal ABLL_1177 PF10672 S-adenosylmethionine-dependent methyltransferase ABLL_1177 PF17785 PUA-like domain ABLL_1178 PF07690 Major Facilitator Superfamily ABLL_1179 PF07729 FCD domain ABLL_1179 PF00392 Bacterial regulatory proteins, gntR family ABLL_1180 PF07690 Major Facilitator Superfamily ABLL_1184 PF00117 Glutamine amidotransferase class-I ABLL_1184 PF02540 NAD synthase ABLL_1184 PF00958 GMP synthase C terminal domain ABLL_1191 PF01595 Cyclin M transmembrane N-terminal domain ABLL_1191 PF00571 CBS domain ABLL_1192 PF01471 Putative peptidoglycan binding domain ABLL_1192 PF03734 L,D-transpeptidase catalytic domain ABLL_1194 PF01594 AI-2E family transporter ABLL_1197 PF03471 Transporter associated domain ABLL_1197 PF00571 CBS domain ABLL_1197 PF01595 Cyclin M transmembrane N-terminal domain ABLL_1200 PF17755 UvrA DNA-binding domain ABLL_1200 PF17760 UvrA interaction domain ABLL_1205 PF16925 Tetracyclin repressor-like, C-terminal domain ABLL_1205 PF00440 Bacterial regulatory proteins, tetR family ABLL_1208 PF07478 D-ala D-ala ligase C-terminus ABLL_1208 PF01820 D-ala D-ala ligase N-terminus ABLL_1209 PF00271 Helicase conserved C-terminal domain ABLL_1209 PF00270 DEAD/DEAH box helicase ABLL_1210 PF10442 FIST C domain ABLL_1210 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1210 PF08495 FIST N domain ABLL_1210 PF00563 EAL domain ABLL_1211 PF08447 PAS fold ABLL_1211 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1212 PF00672 HAMP domain ABLL_1212 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1212 PF02203 Tar ligand binding domain homologue ABLL_1216 PF06426 Serine acetyltransferase, N-terminal ABLL_1216 PF00132 Bacterial transferase hexapeptide (six repeats) ABLL_1217 PF17810 Arginine decarboxylase helical bundle domain ABLL_1217 PF17944 Arginine decarboxylase C-terminal helical extension ABLL_1217 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABLL_1218 PF13393 Histidyl-tRNA synthetase ABLL_1218 PF03129 Anticodon binding domain ABLL_1219 PF02223 Thymidylate kinase ABLL_1220 PF01467 Cytidylyltransferase-like ABLL_1221 PF02441 Flavoprotein ABLL_1223 PF01281 Ribosomal protein L9, N-terminal domain ABLL_1223 PF03948 Ribosomal protein L9, C-terminal domain ABLL_1224 PF00227 Proteasome subunit ABLL_1225 PF10431 C-terminal, D2-small domain, of ClpB protein ABLL_1225 PF07724 AAA domain (Cdc48 subfamily) ABLL_1227 PF01026 TatD related DNase ABLL_1229 PF05036 Sporulation related domain ABLL_1229 PF03330 Lytic transglycolase ABLL_1230 PF00475 Imidazoleglycerol-phosphate dehydratase ABLL_1234 PF01926 50S ribosome-binding GTPase ABLL_1237 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABLL_1239 PF00392 Bacterial regulatory proteins, gntR family ABLL_1239 PF00155 Aminotransferase class I and II ABLL_1240 PF01243 Pyridoxamine 5'-phosphate oxidase ABLL_1242 PF00873 AcrB/AcrD/AcrF family ABLL_1243 PF00873 AcrB/AcrD/AcrF family ABLL_1244 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABLL_1246 PF00581 Rhodanese-like domain ABLL_1247 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1247 PF08448 PAS fold ABLL_1247 PF13188 PAS domain ABLL_1247 PF00072 Response regulator receiver domain ABLL_1247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1248 PF00813 FliP family ABLL_1249 PF05223 NTF2-like N-terminal transpeptidase domain ABLL_1249 PF03717 Penicillin-binding Protein dimerisation domain ABLL_1249 PF00905 Penicillin binding protein transpeptidase domain ABLL_1254 PF00732 GMC oxidoreductase ABLL_1254 PF05199 GMC oxidoreductase ABLL_1256 PF03960 ArsC family ABLL_1260 PF02491 SHS2 domain inserted in FTSA ABLL_1261 PF00091 Tubulin/FtsZ family, GTPase domain ABLL_1261 PF12327 FtsZ family, C-terminal domain ABLL_1262 PF04143 Sulphur transport ABLL_1267 PF00561 alpha/beta hydrolase fold ABLL_1269 PF02609 Exonuclease VII small subunit ABLL_1271 PF00899 ThiF family ABLL_1272 PF02142 MGS-like domain ABLL_1272 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABLL_1272 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABLL_1298 PF10411 Disulfide bond isomerase protein N-terminus ABLL_1298 PF13098 Thioredoxin-like domain ABLL_1300 PF06986 Type-1V conjugative transfer system mating pair stabilisation ABLL_1304 PF06834 TraU protein ABLL_1332 PF13186 Iron-sulfur cluster-binding domain ABLL_1332 PF04055 Radical SAM superfamily ABLL_1336 PF00589 Phage integrase family ABLL_1338 PF01618 MotA/TolQ/ExbB proton channel family ABLL_1339 PF00691 OmpA family ABLL_1339 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABLL_1340 PF03741 Integral membrane protein TerC family ABLL_1341 PF03600 Citrate transporter ABLL_1346 PF00005 ABC transporter ABLL_1347 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABLL_1348 PF13411 MerR HTH family regulatory protein ABLL_1349 PF01556 DnaJ C terminal domain ABLL_1349 PF00226 DnaJ domain ABLL_1350 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1350 PF00072 Response regulator receiver domain ABLL_1350 PF08448 PAS fold ABLL_1350 PF13188 PAS domain ABLL_1352 PF00072 Response regulator receiver domain ABLL_1354 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABLL_1354 PF01266 FAD dependent oxidoreductase ABLL_1377 PF00589 Phage integrase family ABLL_1377 PF13356 Arm DNA-binding domain ABLL_1378 PF00216 Bacterial DNA-binding protein ABLL_1380 PF01795 MraW methylase family ABLL_1382 PF00873 AcrB/AcrD/AcrF family ABLL_1386 PF00501 AMP-binding enzyme ABLL_1386 PF13193 AMP-binding enzyme C-terminal domain ABLL_1387 PF13941 MutL protein ABLL_1388 PF06368 Methylaspartate mutase E chain (MutE) ABLL_1389 PF02310 B12 binding domain ABLL_1390 PF00056 lactate/malate dehydrogenase, NAD binding domain ABLL_1390 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABLL_1391 PF03971 Monomeric isocitrate dehydrogenase ABLL_1394 PF02687 FtsX-like permease family ABLL_1394 PF12704 MacB-like periplasmic core domain ABLL_1395 PF00271 Helicase conserved C-terminal domain ABLL_1395 PF02810 SEC-C motif ABLL_1395 PF07516 SecA Wing and Scaffold domain ABLL_1395 PF01043 SecA preprotein cross-linking domain ABLL_1395 PF07517 SecA DEAD-like domain ABLL_1397 PF12833 Helix-turn-helix domain ABLL_1398 PF00465 Iron-containing alcohol dehydrogenase ABLL_1400 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1400 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABLL_1400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1401 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABLL_1403 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABLL_1403 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABLL_1403 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABLL_1403 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABLL_1403 PF04324 BFD-like [2Fe-2S] binding domain ABLL_1404 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABLL_1404 PF01568 Molydopterin dinucleotide binding domain ABLL_1404 PF04324 BFD-like [2Fe-2S] binding domain ABLL_1404 PF00384 Molybdopterin oxidoreductase ABLL_1405 PF08495 FIST N domain ABLL_1405 PF10442 FIST C domain ABLL_1405 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1405 PF00563 EAL domain ABLL_1406 PF03793 PASTA domain ABLL_1406 PF00069 Protein kinase domain ABLL_1407 PF07690 Major Facilitator Superfamily ABLL_1408 PF03738 Glutathionylspermidine synthase preATP-grasp ABLL_1410 PF08448 PAS fold ABLL_1410 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1413 PF12282 Signal transduction histidine kinase ABLL_1413 PF07568 Histidine kinase ABLL_1413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1414 PF00072 Response regulator receiver domain ABLL_1414 PF00486 Transcriptional regulatory protein, C terminal ABLL_1416 PF00486 Transcriptional regulatory protein, C terminal ABLL_1416 PF00072 Response regulator receiver domain ABLL_1419 PF00557 Metallopeptidase family M24 ABLL_1424 PF01979 Amidohydrolase family ABLL_1425 PF02963 Restriction endonuclease EcoRI ABLL_1426 PF13651 Adenine-specific methyltransferase EcoRI ABLL_1427 PF08501 Shikimate dehydrogenase substrate binding domain ABLL_1430 PF03949 Malic enzyme, NAD binding domain ABLL_1430 PF01515 Phosphate acetyl/butaryl transferase ABLL_1430 PF00390 Malic enzyme, N-terminal domain ABLL_1431 PF00551 Formyl transferase ABLL_1431 PF01842 ACT domain ABLL_1432 PF00588 SpoU rRNA Methylase family ABLL_1434 PF00072 Response regulator receiver domain ABLL_1434 PF00486 Transcriptional regulatory protein, C terminal ABLL_1436 PF01145 SPFH domain / Band 7 family ABLL_1436 PF16200 C-terminal region of band_7 ABLL_1440 PF01654 Cytochrome bd terminal oxidase subunit I ABLL_1445 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABLL_1445 PF00578 AhpC/TSA family ABLL_1448 PF01618 MotA/TolQ/ExbB proton channel family ABLL_1449 PF02472 Biopolymer transport protein ExbD/TolR ABLL_1452 PF13476 AAA domain ABLL_1457 PF03737 Aldolase/RraA ABLL_1458 PF05971 RNA methyltransferase ABLL_1459 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABLL_1460 PF00849 RNA pseudouridylate synthase ABLL_1460 PF01479 S4 domain ABLL_1461 PF13419 Haloacid dehalogenase-like hydrolase ABLL_1465 PF07715 TonB-dependent Receptor Plug Domain ABLL_1465 PF00593 TonB dependent receptor ABLL_1466 PF01497 Periplasmic binding protein ABLL_1467 PF00005 ABC transporter ABLL_1468 PF01032 FecCD transport family ABLL_1469 PF00300 Histidine phosphatase superfamily (branch 1) ABLL_1473 PF00248 Aldo/keto reductase family ABLL_1474 PF02203 Tar ligand binding domain homologue ABLL_1474 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1474 PF00672 HAMP domain ABLL_1477 PF03061 Thioesterase superfamily ABLL_1479 PF01435 Peptidase family M48 ABLL_1479 PF16491 CAAX prenyl protease N-terminal, five membrane helices ABLL_1480 PF02646 RmuC family ABLL_1482 PF04228 Putative neutral zinc metallopeptidase ABLL_1484 PF00994 Probable molybdopterin binding domain ABLL_1484 PF03453 MoeA N-terminal region (domain I and II) ABLL_1484 PF03454 MoeA C-terminal region (domain IV) ABLL_1487 PF01171 PP-loop family ABLL_1488 PF04463 Protein of unknown function (DUF523) ABLL_1489 PF00085 Thioredoxin ABLL_1493 PF00360 Phytochrome region ABLL_1493 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1493 PF01590 GAF domain ABLL_1493 PF00563 EAL domain ABLL_1495 PF02541 Ppx/GppA phosphatase family ABLL_1497 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABLL_1497 PF00205 Thiamine pyrophosphate enzyme, central domain ABLL_1497 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABLL_1498 PF10369 Small subunit of acetolactate synthase ABLL_1499 PF00132 Bacterial transferase hexapeptide (six repeats) ABLL_1499 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABLL_1500 PF01580 FtsK/SpoIIIE family ABLL_1500 PF09397 Ftsk gamma domain ABLL_1500 PF17854 FtsK alpha domain ABLL_1501 PF00486 Transcriptional regulatory protein, C terminal ABLL_1501 PF00072 Response regulator receiver domain ABLL_1502 PF00672 HAMP domain ABLL_1502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1502 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1504 PF07196 Flagellin hook IN motif ABLL_1504 PF07559 Flagellar basal body protein FlaE ABLL_1504 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABLL_1504 PF00460 Flagella basal body rod protein ABLL_1510 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ABLL_1510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABLL_1511 PF01926 50S ribosome-binding GTPase ABLL_1511 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABLL_1512 PF00916 Sulfate permease family ABLL_1512 PF01740 STAS domain ABLL_1514 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABLL_1514 PF02844 Phosphoribosylglycinamide synthetase, N domain ABLL_1514 PF02843 Phosphoribosylglycinamide synthetase, C domain ABLL_1516 PF04453 LPS transport system D ABLL_1516 PF03968 OstA-like protein ABLL_1518 PF00013 KH domain ABLL_1518 PF01138 3' exoribonuclease family, domain 1 ABLL_1518 PF03725 3' exoribonuclease family, domain 2 ABLL_1518 PF00575 S1 RNA binding domain ABLL_1518 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABLL_1519 PF00072 Response regulator receiver domain ABLL_1520 PF01584 CheW-like domain ABLL_1520 PF09078 CheY binding ABLL_1520 PF02895 Signal transducing histidine kinase, homodimeric domain ABLL_1520 PF01627 Hpt domain ABLL_1520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1521 PF03705 CheR methyltransferase, all-alpha domain ABLL_1521 PF01739 CheR methyltransferase, SAM binding domain ABLL_1522 PF03975 CheD chemotactic sensory transduction ABLL_1523 PF01339 CheB methylesterase ABLL_1523 PF00072 Response regulator receiver domain ABLL_1525 PF00589 Phage integrase family ABLL_1525 PF18644 Phage integrase SAM-like domain ABLL_1529 PF01432 Peptidase family M3 ABLL_1530 PF17827 PrmC N-terminal domain ABLL_1530 PF05175 Methyltransferase small domain ABLL_1531 PF04055 Radical SAM superfamily ABLL_1531 PF06969 HemN C-terminal domain ABLL_1532 PF00293 NUDIX domain ABLL_1533 PF13840 ACT domain ABLL_1533 PF01842 ACT domain ABLL_1533 PF00696 Amino acid kinase family ABLL_1536 PF00809 Pterin binding enzyme ABLL_1537 PF01842 ACT domain ABLL_1537 PF02153 Prephenate dehydrogenase ABLL_1538 PF01103 Surface antigen ABLL_1538 PF07244 Surface antigen variable number repeat ABLL_1539 PF04055 Radical SAM superfamily ABLL_1540 PF05193 Peptidase M16 inactive domain ABLL_1541 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABLL_1547 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABLL_1549 PF00133 tRNA synthetases class I (I, L, M and V) ABLL_1549 PF01588 Putative tRNA binding domain ABLL_1549 PF09334 tRNA synthetases class I (M) ABLL_1554 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ABLL_1555 PF01293 Phosphoenolpyruvate carboxykinase ABLL_1557 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABLL_1557 PF00925 GTP cyclohydrolase II ABLL_1559 PF00296 Luciferase-like monooxygenase ABLL_1560 PF02092 Glycyl-tRNA synthetase beta subunit ABLL_1565 PF02527 rRNA small subunit methyltransferase G ABLL_1566 PF00925 GTP cyclohydrolase II ABLL_1567 PF00490 Delta-aminolevulinic acid dehydratase ABLL_1568 PF08447 PAS fold ABLL_1568 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1569 PF00072 Response regulator receiver domain ABLL_1569 PF00486 Transcriptional regulatory protein, C terminal ABLL_1572 PF03477 ATP cone domain ABLL_1572 PF02867 Ribonucleotide reductase, barrel domain ABLL_1572 PF00317 Ribonucleotide reductase, all-alpha domain ABLL_1573 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABLL_1573 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABLL_1574 PF06969 HemN C-terminal domain ABLL_1574 PF04055 Radical SAM superfamily ABLL_1576 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABLL_1577 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABLL_1578 PF02540 NAD synthase ABLL_1582 PF00226 DnaJ domain ABLL_1582 PF05099 Tellurite resistance protein TerB ABLL_1583 PF02416 mttA/Hcf106 family ABLL_1584 PF00902 Sec-independent protein translocase protein (TatC) ABLL_1585 PF02547 Queuosine biosynthesis protein ABLL_1589 PF03781 Sulfatase-modifying factor enzyme 1 ABLL_1589 PF12867 DinB superfamily ABLL_1592 PF03737 Aldolase/RraA ABLL_1595 PF01790 Prolipoprotein diacylglyceryl transferase ABLL_1599 PF01367 5'-3' exonuclease, C-terminal SAM fold ABLL_1599 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABLL_1599 PF00476 DNA polymerase family A ABLL_1600 PF02348 Cytidylyltransferase ABLL_1601 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1601 PF10442 FIST C domain ABLL_1601 PF08495 FIST N domain ABLL_1601 PF00563 EAL domain ABLL_1602 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1602 PF08448 PAS fold ABLL_1603 PF00005 ABC transporter ABLL_1603 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABLL_1604 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABLL_1605 PF00591 Glycosyl transferase family, a/b domain ABLL_1605 PF02885 Glycosyl transferase family, helical bundle domain ABLL_1607 PF00764 Arginosuccinate synthase ABLL_1609 PF08443 RimK-like ATP-grasp domain ABLL_1609 PF18030 RimK PreATP-grasp domain ABLL_1612 PF00132 Bacterial transferase hexapeptide (six repeats) ABLL_1613 PF02080 TrkA-C domain ABLL_1613 PF02254 TrkA-N domain ABLL_1614 PF02386 Cation transport protein ABLL_1615 PF00072 Response regulator receiver domain ABLL_1615 PF00486 Transcriptional regulatory protein, C terminal ABLL_1616 PF02702 Osmosensitive K+ channel His kinase sensor domain ABLL_1616 PF13493 Domain of unknown function (DUF4118) ABLL_1616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1616 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1618 PF13426 PAS domain ABLL_1618 PF00072 Response regulator receiver domain ABLL_1618 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1620 PF02132 RecR protein ABLL_1620 PF13662 Toprim domain ABLL_1622 PF01556 DnaJ C terminal domain ABLL_1622 PF00684 DnaJ central domain ABLL_1622 PF00226 DnaJ domain ABLL_1623 PF00291 Pyridoxal-phosphate dependent enzyme ABLL_1627 PF00753 Metallo-beta-lactamase superfamily ABLL_1628 PF08448 PAS fold ABLL_1628 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1628 PF08447 PAS fold ABLL_1628 PF00563 EAL domain ABLL_1629 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1629 PF00563 EAL domain ABLL_1629 PF01590 GAF domain ABLL_1629 PF00360 Phytochrome region ABLL_1630 PF08003 Protein of unknown function (DUF1698) ABLL_1631 PF05140 ResB-like family ABLL_1631 PF01578 Cytochrome C assembly protein ABLL_1632 PF00072 Response regulator receiver domain ABLL_1632 PF00486 Transcriptional regulatory protein, C terminal ABLL_1633 PF00072 Response regulator receiver domain ABLL_1633 PF13188 PAS domain ABLL_1633 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1633 PF08448 PAS fold ABLL_1633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1634 PF01546 Peptidase family M20/M25/M40 ABLL_1634 PF07687 Peptidase dimerisation domain ABLL_1636 PF02203 Tar ligand binding domain homologue ABLL_1636 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1636 PF00672 HAMP domain ABLL_1637 PF12826 Helix-hairpin-helix motif ABLL_1637 PF03120 NAD-dependent DNA ligase OB-fold domain ABLL_1637 PF00533 BRCA1 C Terminus (BRCT) domain ABLL_1637 PF01653 NAD-dependent DNA ligase adenylation domain ABLL_1638 PF00672 HAMP domain ABLL_1638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1638 PF01627 Hpt domain ABLL_1638 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABLL_1638 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1638 PF00072 Response regulator receiver domain ABLL_1639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1639 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1640 PF11849 Domain of unknown function (DUF3369) ABLL_1641 PF03061 Thioesterase superfamily ABLL_1642 PF00005 ABC transporter ABLL_1642 PF12848 ABC transporter ABLL_1644 PF00465 Iron-containing alcohol dehydrogenase ABLL_1645 PF12833 Helix-turn-helix domain ABLL_1645 PF06719 AraC-type transcriptional regulator N-terminus ABLL_1646 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1647 PF00072 Response regulator receiver domain ABLL_1647 PF00196 Bacterial regulatory proteins, luxR family ABLL_1648 PF01584 CheW-like domain ABLL_1648 PF09078 CheY binding ABLL_1648 PF02895 Signal transducing histidine kinase, homodimeric domain ABLL_1648 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1648 PF01627 Hpt domain ABLL_1649 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1649 PF13493 Domain of unknown function (DUF4118) ABLL_1649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1649 PF02702 Osmosensitive K+ channel His kinase sensor domain ABLL_1650 PF02743 Cache domain ABLL_1650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1650 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1652 PF00486 Transcriptional regulatory protein, C terminal ABLL_1653 PF00881 Nitroreductase family ABLL_1655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABLL_1657 PF02525 Flavodoxin-like fold ABLL_1658 PF01638 HxlR-like helix-turn-helix ABLL_1661 PF03601 Conserved hypothetical protein 698 ABLL_1662 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABLL_1662 PF03466 LysR substrate binding domain ABLL_1663 PF07694 5TMR of 5TMR-LYT ABLL_1663 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1664 PF01161 Phosphatidylethanolamine-binding protein ABLL_1666 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1669 PF00893 Small Multidrug Resistance protein ABLL_1670 PF02525 Flavodoxin-like fold ABLL_1673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1673 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1673 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABLL_1675 PF16925 Tetracyclin repressor-like, C-terminal domain ABLL_1675 PF00440 Bacterial regulatory proteins, tetR family ABLL_1677 PF03831 PhnA domain ABLL_1677 PF08274 PhnA Zinc-Ribbon ABLL_1678 PF00107 Zinc-binding dehydrogenase ABLL_1678 PF08240 Alcohol dehydrogenase GroES-like domain ABLL_1679 PF04055 Radical SAM superfamily ABLL_1680 PF03099 Biotin/lipoate A/B protein ligase family ABLL_1680 PF10437 Bacterial lipoate protein ligase C-terminus ABLL_1681 PF00456 Transketolase, thiamine diphosphate binding domain ABLL_1681 PF17831 Pyruvate dehydrogenase E1 component middle domain ABLL_1682 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABLL_1682 PF00364 Biotin-requiring enzyme ABLL_1682 PF02817 e3 binding domain ABLL_1683 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABLL_1683 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABLL_1685 PF00005 ABC transporter ABLL_1686 PF00072 Response regulator receiver domain ABLL_1686 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1694 PF03992 Antibiotic biosynthesis monooxygenase ABLL_1697 PF00800 Prephenate dehydratase ABLL_1697 PF01817 Chorismate mutase type II ABLL_1699 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABLL_1700 PF00005 ABC transporter ABLL_1701 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1701 PF09456 RcsC Alpha-Beta-Loop (ABL) ABLL_1701 PF00072 Response regulator receiver domain ABLL_1701 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1702 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1702 PF00989 PAS fold ABLL_1702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1703 PF07687 Peptidase dimerisation domain ABLL_1703 PF01546 Peptidase family M20/M25/M40 ABLL_1707 PF01713 Smr domain ABLL_1707 PF00488 MutS domain V ABLL_1709 PF00939 Sodium:sulfate symporter transmembrane region ABLL_1710 PF00994 Probable molybdopterin binding domain ABLL_1713 PF00919 Uncharacterized protein family UPF0004 ABLL_1713 PF04055 Radical SAM superfamily ABLL_1715 PF01761 3-dehydroquinate synthase ABLL_1719 PF17874 MalT-like TPR region ABLL_1719 PF00196 Bacterial regulatory proteins, luxR family ABLL_1721 PF00664 ABC transporter transmembrane region ABLL_1721 PF03412 Peptidase C39 family ABLL_1721 PF00005 ABC transporter ABLL_1722 PF00691 OmpA family ABLL_1722 PF05736 OprF membrane domain ABLL_1724 PF00486 Transcriptional regulatory protein, C terminal ABLL_1724 PF00072 Response regulator receiver domain ABLL_1725 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1725 PF08448 PAS fold ABLL_1725 PF13188 PAS domain ABLL_1725 PF00072 Response regulator receiver domain ABLL_1725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1727 PF00271 Helicase conserved C-terminal domain ABLL_1727 PF00270 DEAD/DEAH box helicase ABLL_1729 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1729 PF08448 PAS fold ABLL_1730 PF00762 Ferrochelatase ABLL_1732 PF04397 LytTr DNA-binding domain ABLL_1732 PF00072 Response regulator receiver domain ABLL_1733 PF07694 5TMR of 5TMR-LYT ABLL_1733 PF06580 Histidine kinase ABLL_1733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1734 PF02146 Sir2 family ABLL_1738 PF00929 Exonuclease ABLL_1740 PF07196 Flagellin hook IN motif ABLL_1740 PF00700 Bacterial flagellin C-terminal helical region ABLL_1740 PF00669 Bacterial flagellin N-terminal helical region ABLL_1743 PF18719 ArlS sensor domain ABLL_1743 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1743 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1744 PF00072 Response regulator receiver domain ABLL_1744 PF00486 Transcriptional regulatory protein, C terminal ABLL_1748 PF00005 ABC transporter ABLL_1748 PF00664 ABC transporter transmembrane region ABLL_1749 PF01594 AI-2E family transporter ABLL_1750 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABLL_1750 PF00933 Glycosyl hydrolase family 3 N terminal domain ABLL_1755 PF02652 L-lactate permease ABLL_1756 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1756 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1764 PF02954 Bacterial regulatory protein, Fis family ABLL_1764 PF00072 Response regulator receiver domain ABLL_1764 PF00158 Sigma-54 interaction domain ABLL_1767 PF03641 Possible lysine decarboxylase ABLL_1768 PF00478 IMP dehydrogenase / GMP reductase domain ABLL_1768 PF00571 CBS domain ABLL_1769 PF01425 Amidase ABLL_1770 PF01196 Ribosomal protein L17 ABLL_1771 PF01000 RNA polymerase Rpb3/RpoA insert domain ABLL_1771 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABLL_1771 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABLL_1772 PF01479 S4 domain ABLL_1772 PF00163 Ribosomal protein S4/S9 N-terminal domain ABLL_1773 PF00411 Ribosomal protein S11 ABLL_1774 PF00416 Ribosomal protein S13/S18 ABLL_1775 PF00444 Ribosomal protein L36 ABLL_1778 PF00180 Isocitrate/isopropylmalate dehydrogenase ABLL_1779 PF00694 Aconitase C-terminal domain ABLL_1780 PF00140 Sigma-70 factor, region 1.2 ABLL_1780 PF04542 Sigma-70 region 2 ABLL_1780 PF04539 Sigma-70 region 3 ABLL_1780 PF04545 Sigma-70, region 4 ABLL_1784 PF06865 Pyrimidine/purine nucleoside phosphorylase ABLL_1785 PF00202 Aminotransferase class-III ABLL_1788 PF01098 Cell cycle protein ABLL_1789 PF00849 RNA pseudouridylate synthase ABLL_1789 PF01479 S4 domain ABLL_1790 PF02903 Alpha amylase, N-terminal ig-like domain ABLL_1790 PF00128 Alpha amylase, catalytic domain ABLL_1791 PF02390 Putative methyltransferase ABLL_1792 PF00005 ABC transporter ABLL_1795 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABLL_1797 PF12848 ABC transporter ABLL_1797 PF00005 ABC transporter ABLL_1798 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ABLL_1798 PF14602 Hexapeptide repeat of succinyl-transferase ABLL_1799 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABLL_1799 PF00271 Helicase conserved C-terminal domain ABLL_1799 PF00270 DEAD/DEAH box helicase ABLL_1799 PF18074 Primosomal protein N C-terminal domain ABLL_1804 PF08448 PAS fold ABLL_1804 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1805 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ABLL_1806 PF00586 AIR synthase related protein, N-terminal domain ABLL_1806 PF02769 AIR synthase related protein, C-terminal domain ABLL_1809 PF01924 Hydrogenase formation hypA family ABLL_1810 PF01455 HupF/HypC family ABLL_1811 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABLL_1814 PF02203 Tar ligand binding domain homologue ABLL_1814 PF00672 HAMP domain ABLL_1814 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1817 PF00893 Small Multidrug Resistance protein ABLL_1819 PF01425 Amidase ABLL_1820 PF02785 Biotin carboxylase C-terminal domain ABLL_1820 PF00289 Biotin carboxylase, N-terminal domain ABLL_1820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABLL_1823 PF00005 ABC transporter ABLL_1826 PF05661 Protein of unknown function (DUF808) ABLL_1828 PF12823 Domain of unknown function (DUF3817) ABLL_1832 PF02926 THUMP domain ABLL_1832 PF02568 Thiamine biosynthesis protein (ThiI) ABLL_1835 PF00999 Sodium/hydrogen exchanger family ABLL_1835 PF03471 Transporter associated domain ABLL_1835 PF02080 TrkA-C domain ABLL_1836 PF07556 Protein of unknown function (DUF1538) ABLL_1837 PF00571 CBS domain ABLL_1842 PF00708 Acylphosphatase ABLL_1842 PF17788 HypF Kae1-like domain ABLL_1842 PF01300 Telomere recombination ABLL_1842 PF07503 HypF finger ABLL_1865 PF04233 Phage Mu protein F like protein ABLL_1889 PF02086 D12 class N6 adenine-specific DNA methyltransferase ABLL_1893 PF01867 CRISPR associated protein Cas1 ABLL_1895 PF18395 Cas3 C-terminal domain ABLL_1895 PF00270 DEAD/DEAH box helicase ABLL_1895 PF18019 HD domain ABLL_1902 PF07660 Secretin and TonB N terminus short domain ABLL_1902 PF07715 TonB-dependent Receptor Plug Domain ABLL_1902 PF00593 TonB dependent receptor ABLL_1906 PF01750 Hydrogenase maturation protease ABLL_1907 PF01292 Prokaryotic cytochrome b561 ABLL_1908 PF00374 Nickel-dependent hydrogenase ABLL_1909 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ABLL_1909 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABLL_1909 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABLL_1911 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ABLL_1911 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABLL_1914 PF00330 Aconitase family (aconitate hydratase) ABLL_1914 PF11791 Aconitate B N-terminal domain ABLL_1914 PF06434 Aconitate hydratase 2 N-terminus ABLL_1917 PF01327 Polypeptide deformylase ABLL_1920 PF00501 AMP-binding enzyme ABLL_1921 PF02803 Thiolase, C-terminal domain ABLL_1921 PF00108 Thiolase, N-terminal domain ABLL_1922 PF00378 Enoyl-CoA hydratase/isomerase ABLL_1922 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABLL_1922 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABLL_1923 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABLL_1923 PF09317 Domain of unknown function (DUF1974) ABLL_1923 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABLL_1925 PF03707 Bacterial signalling protein N terminal repeat ABLL_1925 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1925 PF00563 EAL domain ABLL_1929 PF01709 Transcriptional regulator ABLL_1930 PF04333 MlaA lipoprotein ABLL_1933 PF03641 Possible lysine decarboxylase ABLL_1934 PF13419 Haloacid dehalogenase-like hydrolase ABLL_1935 PF08534 Redoxin ABLL_1939 PF02600 Disulfide bond formation protein DsbB ABLL_1942 PF03737 Aldolase/RraA ABLL_1944 PF02028 BCCT, betaine/carnitine/choline family transporter ABLL_1945 PF07690 Major Facilitator Superfamily ABLL_1949 PF00999 Sodium/hydrogen exchanger family ABLL_1949 PF02254 TrkA-N domain ABLL_1951 PF00464 Serine hydroxymethyltransferase ABLL_1952 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABLL_1952 PF12833 Helix-turn-helix domain ABLL_1952 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABLL_1952 PF02805 Metal binding domain of Ada ABLL_1958 PF00464 Serine hydroxymethyltransferase ABLL_1959 PF00202 Aminotransferase class-III ABLL_1960 PF03473 MOSC domain ABLL_1962 PF01263 Aldose 1-epimerase ABLL_1963 PF00905 Penicillin binding protein transpeptidase domain ABLL_1964 PF00270 DEAD/DEAH box helicase ABLL_1964 PF00271 Helicase conserved C-terminal domain ABLL_1970 PF18381 YcaO cyclodehydratase C-terminal domain ABLL_1970 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ABLL_1974 PF02203 Tar ligand binding domain homologue ABLL_1974 PF00672 HAMP domain ABLL_1974 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_1975 PF00075 RNase H ABLL_1976 PF07836 DmpG-like communication domain ABLL_1976 PF00682 HMGL-like ABLL_1979 PF11799 impB/mucB/samB family C-terminal domain ABLL_1979 PF00817 impB/mucB/samB family ABLL_1979 PF11798 IMS family HHH motif ABLL_1981 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABLL_1981 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABLL_1981 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding ABLL_1987 PF00072 Response regulator receiver domain ABLL_1988 PF00072 Response regulator receiver domain ABLL_1989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1989 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1989 PF01627 Hpt domain ABLL_1989 PF00072 Response regulator receiver domain ABLL_1989 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABLL_1989 PF00672 HAMP domain ABLL_1994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_1994 PF00512 His Kinase A (phospho-acceptor) domain ABLL_1996 PF00563 EAL domain ABLL_1996 PF00990 Diguanylate cyclase, GGDEF domain ABLL_1996 PF08448 PAS fold ABLL_1998 PF01966 HD domain ABLL_1999 PF01243 Pyridoxamine 5'-phosphate oxidase ABLL_1999 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABLL_2002 PF03707 Bacterial signalling protein N terminal repeat ABLL_2002 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2002 PF00563 EAL domain ABLL_2003 PF03880 DbpA RNA binding domain ABLL_2003 PF00270 DEAD/DEAH box helicase ABLL_2003 PF00271 Helicase conserved C-terminal domain ABLL_2006 PF10442 FIST C domain ABLL_2006 PF08495 FIST N domain ABLL_2006 PF00563 EAL domain ABLL_2006 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2008 PF02626 Carboxyltransferase domain, subdomain A and B ABLL_2010 PF03746 LamB/YcsF family ABLL_2011 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABLL_2013 PF03480 Bacterial extracellular solute-binding protein, family 7 ABLL_2014 PF12833 Helix-turn-helix domain ABLL_2014 PF00072 Response regulator receiver domain ABLL_2015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2015 PF17200 Single Cache domain 2 ABLL_2015 PF00672 HAMP domain ABLL_2020 PF00005 ABC transporter ABLL_2021 PF13533 Biotin-lipoyl like ABLL_2023 PF01384 Phosphate transporter family ABLL_2026 PF00183 Hsp90 protein ABLL_2027 PF00230 Major intrinsic protein ABLL_2031 PF12796 Ankyrin repeats (3 copies) ABLL_2031 PF00023 Ankyrin repeat ABLL_2032 PF06628 Catalase-related immune-responsive ABLL_2032 PF00199 Catalase ABLL_2034 PF04403 Paraquat-inducible protein A ABLL_2037 PF08448 PAS fold ABLL_2037 PF00563 EAL domain ABLL_2037 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2041 PF05088 Bacterial NAD-glutamate dehydrogenase ABLL_2042 PF04073 Aminoacyl-tRNA editing domain ABLL_2043 PF08713 DNA alkylation repair enzyme ABLL_2046 PF05958 tRNA (Uracil-5-)-methyltransferase ABLL_2047 PF00593 TonB dependent receptor ABLL_2047 PF07660 Secretin and TonB N terminus short domain ABLL_2047 PF07715 TonB-dependent Receptor Plug Domain ABLL_2050 PF00491 Arginase family ABLL_2051 PF00682 HMGL-like ABLL_2051 PF08502 LeuA allosteric (dimerisation) domain ABLL_2052 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABLL_2052 PF12833 Helix-turn-helix domain ABLL_2053 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABLL_2053 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABLL_2054 PF02833 DHHA2 domain ABLL_2054 PF01368 DHH family ABLL_2057 PF10415 Fumarase C C-terminus ABLL_2057 PF00206 Lyase ABLL_2058 PF00486 Transcriptional regulatory protein, C terminal ABLL_2058 PF00072 Response regulator receiver domain ABLL_2059 PF02743 Cache domain ABLL_2059 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2059 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2060 PF01235 Sodium:alanine symporter family ABLL_2061 PF01048 Phosphorylase superfamily ABLL_2062 PF00698 Acyl transferase domain ABLL_2063 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABLL_2065 PF01389 OmpA-like transmembrane domain ABLL_2065 PF00691 OmpA family ABLL_2066 PF00210 Ferritin-like domain ABLL_2067 PF04052 TolB amino-terminal domain ABLL_2069 PF02472 Biopolymer transport protein ExbD/TolR ABLL_2070 PF01618 MotA/TolQ/ExbB proton channel family ABLL_2071 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABLL_2072 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABLL_2072 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABLL_2073 PF00231 ATP synthase ABLL_2074 PF00306 ATP synthase alpha/beta chain, C terminal domain ABLL_2074 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABLL_2074 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABLL_2075 PF00213 ATP synthase delta (OSCP) subunit ABLL_2076 PF00430 ATP synthase B/B' CF(0) ABLL_2078 PF17762 HTH domain found in ParB protein ABLL_2078 PF02195 ParB-like nuclease domain ABLL_2079 PF13614 AAA domain ABLL_2080 PF02237 Biotin protein ligase C terminal domain ABLL_2080 PF03099 Biotin/lipoate A/B protein ligase family ABLL_2080 PF08279 HTH domain ABLL_2082 PF02911 Formyl transferase, C-terminal domain ABLL_2082 PF00551 Formyl transferase ABLL_2083 PF00696 Amino acid kinase family ABLL_2084 PF01018 GTP1/OBG ABLL_2084 PF01926 50S ribosome-binding GTPase ABLL_2085 PF01016 Ribosomal L27 protein ABLL_2086 PF00829 Ribosomal prokaryotic L21 protein ABLL_2087 PF01042 Endoribonuclease L-PSP ABLL_2088 PF08275 DNA primase catalytic core, N-terminal domain ABLL_2088 PF16730 DnaG-primase C-terminal, helicase-binding domain ABLL_2088 PF13662 Toprim domain ABLL_2088 PF01807 CHC2 zinc finger ABLL_2090 PF00035 Double-stranded RNA binding motif ABLL_2090 PF14622 Ribonuclease-III-like ABLL_2091 PF01264 Chorismate synthase ABLL_2093 PF01435 Peptidase family M48 ABLL_2095 PF00300 Histidine phosphatase superfamily (branch 1) ABLL_2097 PF12631 MnmE helical domain ABLL_2097 PF10396 GTP-binding protein TrmE N-terminus ABLL_2097 PF01926 50S ribosome-binding GTPase ABLL_2099 PF14849 YidC periplasmic domain ABLL_2099 PF02096 60Kd inner membrane protein ABLL_2100 PF01809 Putative membrane protein insertion efficiency factor ABLL_2102 PF00468 Ribosomal protein L34 ABLL_2103 PF10431 C-terminal, D2-small domain, of ClpB protein ABLL_2103 PF02861 Clp amino terminal domain, pathogenicity island component ABLL_2103 PF17871 AAA lid domain ABLL_2103 PF00004 ATPase family associated with various cellular activities (AAA) ABLL_2103 PF07724 AAA domain (Cdc48 subfamily) ABLL_2104 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2106 PF01351 Ribonuclease HII ABLL_2109 PF01625 Peptide methionine sulfoxide reductase ABLL_2113 PF00005 ABC transporter ABLL_2117 PF07715 TonB-dependent Receptor Plug Domain ABLL_2117 PF00593 TonB dependent receptor ABLL_2120 PF01209 ubiE/COQ5 methyltransferase family ABLL_2122 PF01618 MotA/TolQ/ExbB proton channel family ABLL_2123 PF02472 Biopolymer transport protein ExbD/TolR ABLL_2124 PF03544 Gram-negative bacterial TonB protein C-terminal ABLL_2125 PF00313 'Cold-shock' DNA-binding domain ABLL_2126 PF01641 SelR domain ABLL_2127 PF00072 Response regulator receiver domain ABLL_2128 PF00072 Response regulator receiver domain ABLL_2129 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2129 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2129 PF09308 LuxQ, periplasmic ABLL_2129 PF00072 Response regulator receiver domain ABLL_2130 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABLL_2135 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABLL_2135 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2136 PF02142 MGS-like domain ABLL_2136 PF01808 AICARFT/IMPCHase bienzyme ABLL_2137 PF00909 Ammonium Transporter Family ABLL_2138 PF02769 AIR synthase related protein, C-terminal domain ABLL_2138 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABLL_2138 PF00586 AIR synthase related protein, N-terminal domain ABLL_2140 PF01464 Transglycosylase SLT domain ABLL_2140 PF01551 Peptidase family M23 ABLL_2140 PF10145 Phage-related minor tail protein ABLL_2142 PF00583 Acetyltransferase (GNAT) family ABLL_2143 PF00202 Aminotransferase class-III ABLL_2144 PF06339 Ectoine synthase ABLL_2145 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ABLL_2146 PF01227 GTP cyclohydrolase I ABLL_2147 PF01544 CorA-like Mg2+ transporter protein ABLL_2148 PF00482 Type II secretion system (T2SS), protein F ABLL_2149 PF00437 Type II/IV secretion system protein ABLL_2152 PF07650 KH domain ABLL_2152 PF01926 50S ribosome-binding GTPase ABLL_2153 PF01078 Magnesium chelatase, subunit ChlI ABLL_2153 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABLL_2155 PF01327 Polypeptide deformylase ABLL_2156 PF00574 Clp protease ABLL_2157 PF05697 Bacterial trigger factor protein (TF) ABLL_2157 PF05698 Bacterial trigger factor protein (TF) C-terminus ABLL_2157 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABLL_2158 PF00092 von Willebrand factor type A domain ABLL_2159 PF03976 Polyphosphate kinase 2 (PPK2) ABLL_2160 PF03976 Polyphosphate kinase 2 (PPK2) ABLL_2161 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABLL_2162 PF00301 Rubredoxin ABLL_2163 PF16653 Saccharopine dehydrogenase C-terminal domain ABLL_2163 PF03435 Saccharopine dehydrogenase NADP binding domain ABLL_2164 PF00589 Phage integrase family ABLL_2164 PF13356 Arm DNA-binding domain ABLL_2177 PF16671 Actin cross-linking domain ABLL_2177 PF04717 Type VI secretion system, phage-baseplate injector ABLL_2185 PF07724 AAA domain (Cdc48 subfamily) ABLL_2185 PF17871 AAA lid domain ABLL_2185 PF00004 ATPase family associated with various cellular activities (AAA) ABLL_2185 PF10431 C-terminal, D2-small domain, of ClpB protein ABLL_2192 PF04225 Opacity-associated protein A LysM-like domain ABLL_2192 PF01551 Peptidase family M23 ABLL_2194 PF05638 Type VI secretion system effector, Hcp ABLL_2195 PF04717 Type VI secretion system, phage-baseplate injector ABLL_2195 PF16671 Actin cross-linking domain ABLL_2196 PF00182 Chitinase class I ABLL_2199 PF08402 TOBE domain ABLL_2199 PF00005 ABC transporter ABLL_2200 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_2201 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_2202 PF13416 Bacterial extracellular solute-binding protein ABLL_2206 PF01053 Cys/Met metabolism PLP-dependent enzyme ABLL_2207 PF01053 Cys/Met metabolism PLP-dependent enzyme ABLL_2208 PF00486 Transcriptional regulatory protein, C terminal ABLL_2208 PF00072 Response regulator receiver domain ABLL_2209 PF02203 Tar ligand binding domain homologue ABLL_2209 PF00672 HAMP domain ABLL_2209 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2210 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2210 PF00563 EAL domain ABLL_2210 PF03707 Bacterial signalling protein N terminal repeat ABLL_2211 PF00672 HAMP domain ABLL_2211 PF18698 Histidine kinase sensor domain ABLL_2211 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2212 PF00672 HAMP domain ABLL_2212 PF02203 Tar ligand binding domain homologue ABLL_2212 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2213 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2213 PF08447 PAS fold ABLL_2215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABLL_2215 PF03466 LysR substrate binding domain ABLL_2218 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABLL_2220 PF00072 Response regulator receiver domain ABLL_2220 PF00486 Transcriptional regulatory protein, C terminal ABLL_2221 PF00583 Acetyltransferase (GNAT) family ABLL_2222 PF03824 High-affinity nickel-transport protein ABLL_2225 PF06965 Na+/H+ antiporter 1 ABLL_2227 PF12833 Helix-turn-helix domain ABLL_2227 PF02311 AraC-like ligand binding domain ABLL_2228 PF01242 6-pyruvoyl tetrahydropterin synthase ABLL_2231 PF00375 Sodium:dicarboxylate symporter family ABLL_2232 PF00873 AcrB/AcrD/AcrF family ABLL_2235 PF00672 HAMP domain ABLL_2235 PF02203 Tar ligand binding domain homologue ABLL_2235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2238 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABLL_2238 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2240 PF03150 Di-haem cytochrome c peroxidase ABLL_2241 PF04116 Fatty acid hydroxylase superfamily ABLL_2246 PF00137 ATP synthase subunit C ABLL_2247 PF00924 Mechanosensitive ion channel ABLL_2252 PF00171 Aldehyde dehydrogenase family ABLL_2255 PF13746 4Fe-4S dicluster domain ABLL_2255 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ABLL_2255 PF12801 4Fe-4S binding domain ABLL_2256 PF00989 PAS fold ABLL_2256 PF08447 PAS fold ABLL_2256 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2257 PF00072 Response regulator receiver domain ABLL_2257 PF12833 Helix-turn-helix domain ABLL_2259 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABLL_2259 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABLL_2259 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABLL_2259 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABLL_2260 PF00795 Carbon-nitrogen hydrolase ABLL_2265 PF00258 Flavodoxin ABLL_2266 PF01475 Ferric uptake regulator family ABLL_2268 PF07670 Nucleoside recognition ABLL_2268 PF07664 Ferrous iron transport protein B C terminus ABLL_2268 PF02421 Ferrous iron transport protein B ABLL_2270 PF04376 Arginine-tRNA-protein transferase, N terminus ABLL_2270 PF04377 Arginine-tRNA-protein transferase, C terminus ABLL_2271 PF00290 Tryptophan synthase alpha chain ABLL_2272 PF00654 Voltage gated chloride channel ABLL_2273 PF02548 Ketopantoate hydroxymethyltransferase ABLL_2274 PF17864 RuvB AAA lid domain ABLL_2274 PF05491 RuvB C-terminal winged helix domain ABLL_2274 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABLL_2275 PF01594 AI-2E family transporter ABLL_2277 PF09905 DNA-binding protein VF530 ABLL_2278 PF04055 Radical SAM superfamily ABLL_2279 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABLL_2281 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABLL_2281 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABLL_2282 PF03989 DNA gyrase C-terminal domain, beta-propeller ABLL_2282 PF00521 DNA gyrase/topoisomerase IV, subunit A ABLL_2284 PF01960 ArgJ family ABLL_2286 PF00830 Ribosomal L28 family ABLL_2289 PF00534 Glycosyl transferases group 1 ABLL_2289 PF13439 Glycosyltransferase Family 4 ABLL_2292 PF00534 Glycosyl transferases group 1 ABLL_2292 PF13439 Glycosyltransferase Family 4 ABLL_2293 PF01522 Polysaccharide deacetylase ABLL_2294 PF00534 Glycosyl transferases group 1 ABLL_2294 PF13439 Glycosyltransferase Family 4 ABLL_2295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABLL_2295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABLL_2295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABLL_2299 PF00037 4Fe-4S binding domain ABLL_2301 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABLL_2301 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABLL_2302 PF01493 GXGXG motif ABLL_2302 PF01645 Conserved region in glutamate synthase ABLL_2302 PF00310 Glutamine amidotransferases class-II ABLL_2302 PF04898 Glutamate synthase central domain ABLL_2303 PF03480 Bacterial extracellular solute-binding protein, family 7 ABLL_2304 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABLL_2305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABLL_2307 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2307 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2307 PF08448 PAS fold ABLL_2307 PF13188 PAS domain ABLL_2307 PF00072 Response regulator receiver domain ABLL_2308 PF00072 Response regulator receiver domain ABLL_2308 PF00486 Transcriptional regulatory protein, C terminal ABLL_2314 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2314 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2315 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABLL_2316 PF01029 NusB family ABLL_2317 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABLL_2318 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2319 PF00793 DAHP synthetase I family ABLL_2324 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABLL_2329 PF00437 Type II/IV secretion system protein ABLL_2330 PF03958 Bacterial type II/III secretion system short domain ABLL_2330 PF00263 Bacterial type II and III secretion system protein ABLL_2336 PF00482 Type II secretion system (T2SS), protein F ABLL_2338 PF08334 Type II secretion system (T2SS), protein G ABLL_2338 PF07963 Prokaryotic N-terminal methylation motif ABLL_2341 PF09186 Domain of unknown function (DUF1949) ABLL_2341 PF01205 Uncharacterized protein family UPF0029 ABLL_2342 PF01479 S4 domain ABLL_2342 PF01728 FtsJ-like methyltransferase ABLL_2343 PF01687 Riboflavin kinase ABLL_2343 PF06574 FAD synthetase ABLL_2344 PF13649 Methyltransferase domain ABLL_2345 PF00578 AhpC/TSA family ABLL_2347 PF02913 FAD linked oxidases, C-terminal domain ABLL_2347 PF01565 FAD binding domain ABLL_2348 PF03631 Virulence factor BrkB ABLL_2349 PF00360 Phytochrome region ABLL_2349 PF00563 EAL domain ABLL_2349 PF01590 GAF domain ABLL_2349 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2352 PF00004 ATPase family associated with various cellular activities (AAA) ABLL_2352 PF02861 Clp amino terminal domain, pathogenicity island component ABLL_2352 PF10431 C-terminal, D2-small domain, of ClpB protein ABLL_2352 PF07724 AAA domain (Cdc48 subfamily) ABLL_2352 PF17871 AAA lid domain ABLL_2353 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABLL_2356 PF13193 AMP-binding enzyme C-terminal domain ABLL_2356 PF00501 AMP-binding enzyme ABLL_2357 PF01575 MaoC like domain ABLL_2361 PF00672 HAMP domain ABLL_2361 PF02203 Tar ligand binding domain homologue ABLL_2361 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2362 PF01741 Large-conductance mechanosensitive channel, MscL ABLL_2363 PF01613 Flavin reductase like domain ABLL_2368 PF00771 FHIPEP family ABLL_2369 PF00669 Bacterial flagellin N-terminal helical region ABLL_2369 PF00700 Bacterial flagellin C-terminal helical region ABLL_2370 PF18269 T3SS EscN ATPase C-terminal domain ABLL_2370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABLL_2372 PF01312 FlhB HrpN YscU SpaS Family ABLL_2375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABLL_2375 PF00460 Flagella basal body rod protein ABLL_2376 PF02049 Flagellar hook-basal body complex protein FliE ABLL_2378 PF10609 NUBPL iron-transfer P-loop NTPase ABLL_2379 PF00448 SRP54-type protein, GTPase domain ABLL_2384 PF01618 MotA/TolQ/ExbB proton channel family ABLL_2385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABLL_2385 PF16973 Flagellar motor switch protein FliN N-terminal ABLL_2389 PF07559 Flagellar basal body protein FlaE ABLL_2389 PF00460 Flagella basal body rod protein ABLL_2389 PF07196 Flagellin hook IN motif ABLL_2389 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABLL_2390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABLL_2390 PF07559 Flagellar basal body protein FlaE ABLL_2390 PF00460 Flagella basal body rod protein ABLL_2390 PF07196 Flagellin hook IN motif ABLL_2392 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABLL_2394 PF01706 FliG C-terminal domain ABLL_2394 PF14841 FliG middle domain ABLL_2394 PF14842 FliG N-terminal domain ABLL_2395 PF01514 Secretory protein of YscJ/FliF family ABLL_2395 PF08345 Flagellar M-ring protein C-terminal ABLL_2396 PF00460 Flagella basal body rod protein ABLL_2397 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABLL_2397 PF00460 Flagella basal body rod protein ABLL_2400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABLL_2400 PF00460 Flagella basal body rod protein ABLL_2403 PF01782 RimM N-terminal domain ABLL_2405 PF00886 Ribosomal protein S16 ABLL_2406 PF00448 SRP54-type protein, GTPase domain ABLL_2406 PF02881 SRP54-type protein, helical bundle domain ABLL_2406 PF02978 Signal peptide binding domain ABLL_2407 PF00849 RNA pseudouridylate synthase ABLL_2407 PF01479 S4 domain ABLL_2408 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABLL_2410 PF01784 NIF3 (NGG1p interacting factor 3) ABLL_2411 PF02091 Glycyl-tRNA synthetase alpha subunit ABLL_2413 PF00731 AIR carboxylase ABLL_2416 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2416 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2416 PF17200 Single Cache domain 2 ABLL_2416 PF17200 Single Cache domain 2 ABLL_2416 PF00672 HAMP domain ABLL_2416 PF00672 HAMP domain ABLL_2417 PF13476 AAA domain ABLL_2418 PF01513 ATP-NAD kinase ABLL_2419 PF03764 Elongation factor G, domain IV ABLL_2419 PF00009 Elongation factor Tu GTP binding domain ABLL_2419 PF14492 Elongation Factor G, domain II ABLL_2419 PF03144 Elongation factor Tu domain 2 ABLL_2419 PF00679 Elongation factor G C-terminus ABLL_2420 PF00177 Ribosomal protein S7p/S5e ABLL_2421 PF00164 Ribosomal protein S12/S23 ABLL_2422 PF07690 Major Facilitator Superfamily ABLL_2424 PF00672 HAMP domain ABLL_2424 PF02203 Tar ligand binding domain homologue ABLL_2424 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2426 PF00005 ABC transporter ABLL_2429 PF13190 PDGLE domain ABLL_2429 PF01891 Cobalt uptake substrate-specific transmembrane region ABLL_2436 PF00800 Prephenate dehydratase ABLL_2436 PF01842 ACT domain ABLL_2436 PF01817 Chorismate mutase type II ABLL_2439 PF00561 alpha/beta hydrolase fold ABLL_2440 PF01361 Tautomerase enzyme ABLL_2443 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABLL_2443 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ABLL_2445 PF00171 Aldehyde dehydrogenase family ABLL_2446 PF03928 Haem-degrading ABLL_2447 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABLL_2448 PF00175 Oxidoreductase NAD-binding domain ABLL_2448 PF00111 2Fe-2S iron-sulfur cluster binding domain ABLL_2448 PF00970 Oxidoreductase FAD-binding domain ABLL_2449 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABLL_2449 PF00056 lactate/malate dehydrogenase, NAD binding domain ABLL_2450 PF12282 Signal transduction histidine kinase ABLL_2450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2450 PF07568 Histidine kinase ABLL_2451 PF00072 Response regulator receiver domain ABLL_2454 PF01925 Sulfite exporter TauE/SafE ABLL_2455 PF00175 Oxidoreductase NAD-binding domain ABLL_2455 PF00970 Oxidoreductase FAD-binding domain ABLL_2455 PF00111 2Fe-2S iron-sulfur cluster binding domain ABLL_2457 PF04945 YHS domain ABLL_2457 PF02332 Methane/Phenol/Toluene Hydroxylase ABLL_2458 PF02406 MmoB/DmpM family ABLL_2459 PF02332 Methane/Phenol/Toluene Hydroxylase ABLL_2461 PF12282 Signal transduction histidine kinase ABLL_2461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2461 PF07568 Histidine kinase ABLL_2463 PF02203 Tar ligand binding domain homologue ABLL_2463 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2463 PF00672 HAMP domain ABLL_2464 PF00106 short chain dehydrogenase ABLL_2465 PF00180 Isocitrate/isopropylmalate dehydrogenase ABLL_2468 PF04997 RNA polymerase Rpb1, domain 1 ABLL_2468 PF04998 RNA polymerase Rpb1, domain 5 ABLL_2468 PF00623 RNA polymerase Rpb1, domain 2 ABLL_2468 PF05000 RNA polymerase Rpb1, domain 4 ABLL_2468 PF04983 RNA polymerase Rpb1, domain 3 ABLL_2469 PF04563 RNA polymerase beta subunit ABLL_2469 PF04565 RNA polymerase Rpb2, domain 3 ABLL_2469 PF04561 RNA polymerase Rpb2, domain 2 ABLL_2469 PF10385 RNA polymerase beta subunit external 1 domain ABLL_2469 PF04560 RNA polymerase Rpb2, domain 7 ABLL_2469 PF00562 RNA polymerase Rpb2, domain 6 ABLL_2470 PF16320 Ribosomal protein L7/L12 dimerisation domain ABLL_2470 PF00542 Ribosomal protein L7/L12 C-terminal domain ABLL_2471 PF00466 Ribosomal protein L10 ABLL_2472 PF00687 Ribosomal protein L1p/L10e family ABLL_2473 PF00298 Ribosomal protein L11, RNA binding domain ABLL_2473 PF03946 Ribosomal protein L11, N-terminal domain ABLL_2474 PF02357 Transcription termination factor nusG ABLL_2476 PF00471 Ribosomal protein L33 ABLL_2477 PF03144 Elongation factor Tu domain 2 ABLL_2477 PF00009 Elongation factor Tu GTP binding domain ABLL_2477 PF03143 Elongation factor Tu C-terminal domain ABLL_2478 PF08245 Mur ligase middle domain ABLL_2479 PF00953 Glycosyl transferase family 4 ABLL_2479 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ABLL_2480 PF01676 Metalloenzyme superfamily ABLL_2480 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABLL_2481 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABLL_2481 PF00005 ABC transporter ABLL_2482 PF00905 Penicillin binding protein transpeptidase domain ABLL_2482 PF00912 Transglycosylase ABLL_2483 PF03951 Glutamine synthetase, beta-Grasp domain ABLL_2483 PF00120 Glutamine synthetase, catalytic domain ABLL_2485 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2485 PF00072 Response regulator receiver domain ABLL_2486 PF02391 MoaE protein ABLL_2488 PF02621 Menaquinone biosynthesis ABLL_2489 PF02673 Bacitracin resistance protein BacA ABLL_2490 PF04101 Glycosyltransferase family 28 C-terminal domain ABLL_2490 PF03033 Glycosyltransferase family 28 N-terminal domain ABLL_2491 PF01098 Cell cycle protein ABLL_2493 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABLL_2496 PF00117 Glutamine amidotransferase class-I ABLL_2497 PF13416 Bacterial extracellular solute-binding protein ABLL_2498 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_2499 PF00005 ABC transporter ABLL_2500 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2500 PF00563 EAL domain ABLL_2500 PF03707 Bacterial signalling protein N terminal repeat ABLL_2501 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABLL_2501 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABLL_2507 PF00575 S1 RNA binding domain ABLL_2507 PF17674 HHH domain ABLL_2507 PF16921 Tex protein YqgF-like domain ABLL_2507 PF09371 Tex-like protein N-terminal domain ABLL_2509 PF01042 Endoribonuclease L-PSP ABLL_2510 PF13344 Haloacid dehalogenase-like hydrolase ABLL_2510 PF00293 NUDIX domain ABLL_2512 PF00155 Aminotransferase class I and II ABLL_2516 PF01245 Ribosomal protein L19 ABLL_2517 PF01746 tRNA (Guanine-1)-methyltransferase ABLL_2519 PF01717 Cobalamin-independent synthase, Catalytic domain ABLL_2519 PF08267 Cobalamin-independent synthase, N-terminal domain ABLL_2520 PF13291 ACT domain ABLL_2520 PF00291 Pyridoxal-phosphate dependent enzyme ABLL_2521 PF00119 ATP synthase A chain ABLL_2523 PF13361 UvrD-like helicase C-terminal domain ABLL_2523 PF00580 UvrD/REP helicase N-terminal domain ABLL_2524 PF00696 Amino acid kinase family ABLL_2525 PF00291 Pyridoxal-phosphate dependent enzyme ABLL_2526 PF00355 Rieske [2Fe-2S] domain ABLL_2526 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ABLL_2527 PF00032 Cytochrome b(C-terminal)/b6/petD ABLL_2527 PF00033 Cytochrome b/b6/petB ABLL_2530 PF04452 RNA methyltransferase ABLL_2532 PF00994 Probable molybdopterin binding domain ABLL_2532 PF03453 MoeA N-terminal region (domain I and II) ABLL_2532 PF03454 MoeA C-terminal region (domain IV) ABLL_2533 PF06508 Queuosine biosynthesis protein QueC ABLL_2537 PF00550 Phosphopantetheine attachment site ABLL_2538 PF00109 Beta-ketoacyl synthase, N-terminal domain ABLL_2538 PF02801 Beta-ketoacyl synthase, C-terminal domain ABLL_2539 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABLL_2540 PF01230 HIT domain ABLL_2541 PF01409 tRNA synthetases class II core domain (F) ABLL_2541 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABLL_2542 PF01588 Putative tRNA binding domain ABLL_2542 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABLL_2542 PF03484 tRNA synthetase B5 domain ABLL_2542 PF03147 Ferredoxin-fold anticodon binding domain ABLL_2543 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABLL_2544 PF02401 LytB protein ABLL_2545 PF00575 S1 RNA binding domain ABLL_2546 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABLL_2546 PF01842 ACT domain ABLL_2546 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABLL_2547 PF01132 Elongation factor P (EF-P) OB domain ABLL_2547 PF09285 Elongation factor P, C-terminal ABLL_2547 PF08207 Elongation factor P (EF-P) KOW-like domain ABLL_2548 PF01872 RibD C-terminal domain ABLL_2548 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABLL_2549 PF02576 RimP N-terminal domain ABLL_2550 PF02033 Ribosome-binding factor A ABLL_2551 PF00009 Elongation factor Tu GTP binding domain ABLL_2551 PF11987 Translation-initiation factor 2 ABLL_2551 PF04760 Translation initiation factor IF-2, N-terminal region ABLL_2553 PF08544 GHMP kinases C terminal ABLL_2553 PF00288 GHMP kinases N terminal domain ABLL_2555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABLL_2556 PF01476 LysM domain ABLL_2556 PF01551 Peptidase family M23 ABLL_2558 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABLL_2558 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABLL_2559 PF02445 Quinolinate synthetase A protein ABLL_2560 PF02660 Glycerol-3-phosphate acyltransferase ABLL_2562 PF05538 Campylobacter major outer membrane protein ABLL_2564 PF00472 RF-1 domain ABLL_2564 PF03462 PCRF domain ABLL_2565 PF13533 Biotin-lipoyl like ABLL_2566 PF07869 Protein of unknown function (DUF1656) ABLL_2567 PF04632 Fusaric acid resistance protein family ABLL_2568 PF02321 Outer membrane efflux protein ABLL_2569 PF01047 MarR family ABLL_2574 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ABLL_2574 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABLL_2577 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABLL_2578 PF01668 SmpB protein ABLL_2579 PF00288 GHMP kinases N terminal domain ABLL_2580 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABLL_2581 PF00580 UvrD/REP helicase N-terminal domain ABLL_2581 PF13361 UvrD-like helicase C-terminal domain ABLL_2582 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABLL_2582 PF03466 LysR substrate binding domain ABLL_2583 PF04055 Radical SAM superfamily ABLL_2583 PF16199 Radical_SAM C-terminal domain ABLL_2584 PF00156 Phosphoribosyl transferase domain ABLL_2584 PF13537 Glutamine amidotransferase domain ABLL_2585 PF05173 Dihydrodipicolinate reductase, C-terminus ABLL_2585 PF01113 Dihydrodipicolinate reductase, N-terminus ABLL_2586 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABLL_2587 PF00085 Thioredoxin ABLL_2588 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABLL_2588 PF02272 DHHA1 domain ABLL_2588 PF01411 tRNA synthetases class II (A) ABLL_2594 PF00877 NlpC/P60 family ABLL_2595 PF00877 NlpC/P60 family ABLL_2598 PF00892 EamA-like transporter family ABLL_2600 PF02545 Maf-like protein ABLL_2601 PF03150 Di-haem cytochrome c peroxidase ABLL_2601 PF00034 Cytochrome c ABLL_2602 PF02779 Transketolase, pyrimidine binding domain ABLL_2602 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABLL_2602 PF02780 Transketolase, C-terminal domain ABLL_2603 PF00155 Aminotransferase class I and II ABLL_2604 PF01817 Chorismate mutase type II ABLL_2604 PF01842 ACT domain ABLL_2604 PF00800 Prephenate dehydratase ABLL_2605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABLL_2605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABLL_2607 PF00121 Triosephosphate isomerase ABLL_2608 PF00162 Phosphoglycerate kinase ABLL_2609 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABLL_2609 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABLL_2610 PF01467 Cytidylyltransferase-like ABLL_2612 PF05746 DALR anticodon binding domain ABLL_2612 PF00750 tRNA synthetases class I (R) ABLL_2612 PF03485 Arginyl tRNA synthetase N terminal domain ABLL_2613 PF02416 mttA/Hcf106 family ABLL_2614 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABLL_2615 PF01553 Acyltransferase ABLL_2618 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ABLL_2620 PF13180 PDZ domain ABLL_2620 PF03572 Peptidase family S41 ABLL_2623 PF01142 tRNA pseudouridine synthase D (TruD) ABLL_2624 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABLL_2629 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2629 PF00989 PAS fold ABLL_2629 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2629 PF08447 PAS fold ABLL_2630 PF00563 EAL domain ABLL_2632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2632 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2632 PF09456 RcsC Alpha-Beta-Loop (ABL) ABLL_2632 PF00072 Response regulator receiver domain ABLL_2633 PF00920 Dehydratase family ABLL_2634 PF17820 PDZ domain ABLL_2634 PF13180 PDZ domain ABLL_2635 PF00072 Response regulator receiver domain ABLL_2635 PF00486 Transcriptional regulatory protein, C terminal ABLL_2636 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2636 PF00672 HAMP domain ABLL_2636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2638 PF03186 CobD/Cbib protein ABLL_2639 PF13460 NAD(P)H-binding ABLL_2639 PF11066 Protein of unknown function (DUF2867) ABLL_2642 PF07685 CobB/CobQ-like glutamine amidotransferase domain ABLL_2642 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABLL_2643 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2647 PF00155 Aminotransferase class I and II ABLL_2648 PF02654 Cobalamin-5-phosphate synthase ABLL_2650 PF01914 MarC family integral membrane protein ABLL_2651 PF13472 GDSL-like Lipase/Acylhydrolase family ABLL_2651 PF02348 Cytidylyltransferase ABLL_2652 PF02277 Phosphoribosyltransferase ABLL_2653 PF00939 Sodium:sulfate symporter transmembrane region ABLL_2655 PF11412 Disulphide bond corrector protein DsbC ABLL_2655 PF02683 Cytochrome C biogenesis protein transmembrane region ABLL_2656 PF00085 Thioredoxin ABLL_2658 PF08443 RimK-like ATP-grasp domain ABLL_2658 PF18030 RimK PreATP-grasp domain ABLL_2661 PF00563 EAL domain ABLL_2661 PF10442 FIST C domain ABLL_2661 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2661 PF08495 FIST N domain ABLL_2662 PF02666 Phosphatidylserine decarboxylase ABLL_2664 PF06725 3D domain ABLL_2664 PF03562 MltA specific insert domain ABLL_2665 PF00012 Hsp70 protein ABLL_2666 PF01025 GrpE ABLL_2668 PF16868 NMT1-like family ABLL_2670 PF00072 Response regulator receiver domain ABLL_2670 PF00196 Bacterial regulatory proteins, luxR family ABLL_2671 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2671 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2672 PF01416 tRNA pseudouridine synthase ABLL_2674 PF01478 Type IV leader peptidase family ABLL_2674 PF06750 Bacterial Peptidase A24 N-terminal domain ABLL_2675 PF01255 Putative undecaprenyl diphosphate synthase ABLL_2676 PF04127 DNA / pantothenate metabolism flavoprotein ABLL_2676 PF02441 Flavoprotein ABLL_2677 PF14602 Hexapeptide repeat of succinyl-transferase ABLL_2677 PF12804 MobA-like NTP transferase domain ABLL_2679 PF00271 Helicase conserved C-terminal domain ABLL_2679 PF00270 DEAD/DEAH box helicase ABLL_2679 PF08148 DSHCT (NUC185) domain ABLL_2680 PF05958 tRNA (Uracil-5-)-methyltransferase ABLL_2681 PF00669 Bacterial flagellin N-terminal helical region ABLL_2681 PF00700 Bacterial flagellin C-terminal helical region ABLL_2682 PF00669 Bacterial flagellin N-terminal helical region ABLL_2682 PF00700 Bacterial flagellin C-terminal helical region ABLL_2687 PF03102 NeuB family ABLL_2687 PF08666 SAF domain ABLL_2688 PF01050 Mannose-6-phosphate isomerase ABLL_2688 PF00483 Nucleotidyl transferase ABLL_2690 PF00154 recA bacterial DNA recombination protein ABLL_2691 PF03952 Enolase, N-terminal domain ABLL_2691 PF00113 Enolase, C-terminal TIM barrel domain ABLL_2694 PF00999 Sodium/hydrogen exchanger family ABLL_2694 PF02254 TrkA-N domain ABLL_2694 PF02080 TrkA-C domain ABLL_2695 PF06968 Biotin and Thiamin Synthesis associated domain ABLL_2695 PF04055 Radical SAM superfamily ABLL_2697 PF13368 Topoisomerase C-terminal repeat ABLL_2697 PF01751 Toprim domain ABLL_2697 PF01131 DNA topoisomerase ABLL_2698 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABLL_2699 PF02621 Menaquinone biosynthesis ABLL_2701 PF00361 Proton-conducting membrane transporter ABLL_2702 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ABLL_2702 PF00361 Proton-conducting membrane transporter ABLL_2703 PF00361 Proton-conducting membrane transporter ABLL_2703 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABLL_2704 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABLL_2705 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABLL_2706 PF12838 4Fe-4S dicluster domain ABLL_2707 PF00146 NADH dehydrogenase ABLL_2708 PF00384 Molybdopterin oxidoreductase ABLL_2708 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABLL_2708 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ABLL_2711 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABLL_2712 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABLL_2713 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABLL_2714 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABLL_2715 PF00004 ATPase family associated with various cellular activities (AAA) ABLL_2715 PF17758 Proteasomal ATPase OB N-terminal domain ABLL_2715 PF16450 Proteasomal ATPase OB C-terminal domain ABLL_2721 PF01740 STAS domain ABLL_2721 PF00916 Sulfate permease family ABLL_2723 PF01261 Xylose isomerase-like TIM barrel ABLL_2724 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABLL_2725 PF00209 Sodium:neurotransmitter symporter family ABLL_2727 PF02677 Epoxyqueuosine reductase QueH ABLL_2728 PF02684 Lipid-A-disaccharide synthetase ABLL_2729 PF07977 FabA-like domain ABLL_2730 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABLL_2730 PF00132 Bacterial transferase hexapeptide (six repeats) ABLL_2731 PF10431 C-terminal, D2-small domain, of ClpB protein ABLL_2731 PF06689 ClpX C4-type zinc finger ABLL_2731 PF07724 AAA domain (Cdc48 subfamily) ABLL_2734 PF00677 Lumazine binding domain ABLL_2735 PF01134 Glucose inhibited division protein A ABLL_2735 PF13932 GidA associated domain ABLL_2738 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ABLL_2738 PF12801 4Fe-4S binding domain ABLL_2738 PF13746 4Fe-4S dicluster domain ABLL_2739 PF06418 CTP synthase N-terminus ABLL_2739 PF00117 Glutamine amidotransferase class-I ABLL_2740 PF01368 DHH family ABLL_2740 PF17768 RecJ OB domain ABLL_2740 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ABLL_2740 PF02272 DHHA1 domain ABLL_2743 PF01965 DJ-1/PfpI family ABLL_2746 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABLL_2746 PF14579 Helix-hairpin-helix motif ABLL_2746 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABLL_2746 PF02811 PHP domain ABLL_2747 PF01975 Survival protein SurE ABLL_2750 PF01967 MoaC family ABLL_2751 PF01165 Ribosomal protein S21 ABLL_2752 PF01027 Inhibitor of apoptosis-promoting Bax1 ABLL_2753 PF02581 Thiamine monophosphate synthase ABLL_2753 PF17792 ThiD2 family ABLL_2755 PF03840 Preprotein translocase SecG subunit ABLL_2757 PF01765 Ribosome recycling factor ABLL_2758 PF00156 Phosphoribosyl transferase domain ABLL_2760 PF12832 MFS_1 like family ABLL_2761 PF12794 Mechanosensitive ion channel inner membrane domain 1 ABLL_2761 PF12795 Mechanosensitive ion channel porin domain ABLL_2761 PF00924 Mechanosensitive ion channel ABLL_2762 PF01544 CorA-like Mg2+ transporter protein ABLL_2763 PF03883 Peroxide stress protein YaaA ABLL_2764 PF02810 SEC-C motif ABLL_2770 PF03167 Uracil DNA glycosylase superfamily ABLL_2771 PF00171 Aldehyde dehydrogenase family ABLL_2772 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABLL_2772 PF00205 Thiamine pyrophosphate enzyme, central domain ABLL_2772 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABLL_2773 PF04011 LemA family ABLL_2776 PF13419 Haloacid dehalogenase-like hydrolase ABLL_2780 PF07690 Major Facilitator Superfamily ABLL_2782 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2782 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2783 PF00072 Response regulator receiver domain ABLL_2783 PF00486 Transcriptional regulatory protein, C terminal ABLL_2784 PF00672 HAMP domain ABLL_2784 PF02203 Tar ligand binding domain homologue ABLL_2784 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2785 PF11849 Domain of unknown function (DUF3369) ABLL_2788 PF00072 Response regulator receiver domain ABLL_2788 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2789 PF00529 HlyD membrane-fusion protein of T1SS ABLL_2789 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABLL_2790 PF00873 AcrB/AcrD/AcrF family ABLL_2791 PF02321 Outer membrane efflux protein ABLL_2795 PF13411 MerR HTH family regulatory protein ABLL_2795 PF00145 C-5 cytosine-specific DNA methylase ABLL_2799 PF00149 Calcineurin-like phosphoesterase ABLL_2801 PF01053 Cys/Met metabolism PLP-dependent enzyme ABLL_2802 PF02082 Transcriptional regulator ABLL_2803 PF00291 Pyridoxal-phosphate dependent enzyme ABLL_2805 PF01507 Phosphoadenosine phosphosulfate reductase family ABLL_2806 PF01507 Phosphoadenosine phosphosulfate reductase family ABLL_2807 PF00009 Elongation factor Tu GTP binding domain ABLL_2808 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABLL_2808 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABLL_2809 PF02347 Glycine cleavage system P-protein ABLL_2810 PF00149 Calcineurin-like phosphoesterase ABLL_2811 PF00011 Hsp20/alpha crystallin family ABLL_2813 PF04168 A predicted alpha-helical domain with a conserved ER motif. ABLL_2813 PF14403 Circularly permuted ATP-grasp type 2 ABLL_2814 PF01841 Transglutaminase-like superfamily ABLL_2814 PF08379 Bacterial transglutaminase-like N-terminal region ABLL_2815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABLL_2815 PF02203 Tar ligand binding domain homologue ABLL_2815 PF00672 HAMP domain ABLL_2816 PF00005 ABC transporter ABLL_2816 PF12857 TOBE-like domain ABLL_2816 PF17850 CysA C-terminal regulatory domain ABLL_2817 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_2818 PF00528 Binding-protein-dependent transport system inner membrane component ABLL_2819 PF10442 FIST C domain ABLL_2819 PF00563 EAL domain ABLL_2819 PF00990 Diguanylate cyclase, GGDEF domain ABLL_2819 PF08495 FIST N domain ABLL_2821 PF02082 Transcriptional regulator ABLL_2825 PF14403 Circularly permuted ATP-grasp type 2 ABLL_2827 PF00884 Sulfatase ABLL_2827 PF08019 Phosphoethanolamine transferase EptA/EptB ABLL_2829 PF01219 Prokaryotic diacylglycerol kinase ABLL_2830 PF09086 Domain of unknown function (DUF1924) ABLL_2835 PF00072 Response regulator receiver domain ABLL_2835 PF00486 Transcriptional regulatory protein, C terminal ABLL_2836 PF00512 His Kinase A (phospho-acceptor) domain ABLL_2836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABLL_2836 PF00672 HAMP domain ABLL_2837 PF08241 Methyltransferase domain ABLL_2838 PF12833 Helix-turn-helix domain ABLL_2839 PF11849 Domain of unknown function (DUF3369) ABLL_2840 PF02511 Thymidylate synthase complementing protein ABLL_2841 PF04960 Glutaminase ABLL_2842 PF03458 UPF0126 domain ABLL_2844 PF00551 Formyl transferase ABLL_2844 PF02911 Formyl transferase, C-terminal domain ABLL_2845 PF02075 Crossover junction endodeoxyribonuclease RuvC ABLL_P1_0003 PF01446 Replication protein