ABLL_0001 SM00382 ATPases associated with a variety of cellular activities ABLL_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain ABLL_0002 SM00480 DNA polymerase III beta subunit ABLL_0003 SM00387 Histidine kinase-like ATPases ABLL_0003 SM00433 TopoisomeraseII ABLL_0009 SM00382 ATPases associated with a variety of cellular activities ABLL_0009 SM00994 ClpX C4-type zinc finger ABLL_0009 SM01086 C-terminal, D2-small domain, of ClpB protein ABLL_0012 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABLL_0012 SM00382 ATPases associated with a variety of cellular activities ABLL_0022 SM00382 ATPases associated with a variety of cellular activities ABLL_0026 SM00382 ATPases associated with a variety of cellular activities ABLL_0037 SM00091 PAS domain ABLL_0037 SM00387 Histidine kinase-like ATPases ABLL_0047 SM00248 ankyrin repeats ABLL_0058 SM00671 Sel1-like repeats. ABLL_0060 SM00849 Metallo-beta-lactamase superfamily ABLL_0064 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_0073 SM00364 Leucine-rich repeats, bacterial type ABLL_0073 SM00365 Leucine-rich repeat, SDS22-like subfamily ABLL_0073 SM00369 Leucine-rich repeats, typical (most populated) subfamily ABLL_0075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_0078 SM00998 Adenylosuccinate lyase C-terminus ABLL_0087 SM01118 ABLL_0087 ABLL_0093 SM00829 Enoylreductase ABLL_0098 SM00845 GatB domain ABLL_0109 SM00893 Electron transfer flavoprotein domain ABLL_0110 SM00893 Electron transfer flavoprotein domain ABLL_0115 SM00882 Coenzyme A transferase ABLL_0116 SM00882 Coenzyme A transferase ABLL_0118 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_0118 SM00387 Histidine kinase-like ATPases ABLL_0119 SM00448 cheY-homologous receiver domain ABLL_0119 SM00862 Transcriptional regulatory protein, C terminal ABLL_0120 SM00448 cheY-homologous receiver domain ABLL_0120 SM00862 Transcriptional regulatory protein, C terminal ABLL_0121 SM00091 PAS domain ABLL_0121 SM00387 Histidine kinase-like ATPases ABLL_0128 SM00878 Biotin carboxylase C-terminal domain ABLL_0129 SM00487 DEAD-like helicases superfamily ABLL_0129 SM00490 helicase superfamily c-terminal domain ABLL_0141 SM00382 ATPases associated with a variety of cellular activities ABLL_0142 SM00363 S4 RNA-binding domain ABLL_0143 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_0144 SM00849 Metallo-beta-lactamase superfamily ABLL_0145 SM00650 Ribosomal RNA adenine dimethylases ABLL_0151 SM00360 RNA recognition motif ABLL_0152 SM00448 cheY-homologous receiver domain ABLL_0152 SM00862 Transcriptional regulatory protein, C terminal ABLL_0153 SM00387 Histidine kinase-like ATPases ABLL_0153 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0158 SM00867 YceI-like domain ABLL_0161 SM00422 helix_turn_helix, mercury resistance ABLL_0166 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABLL_0192 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABLL_0196 SM00867 YceI-like domain ABLL_0197 SM00347 helix_turn_helix multiple antibiotic resistance protein ABLL_0200 SM00788 Adenylosuccinate synthetase ABLL_0202 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABLL_0204 SM00448 cheY-homologous receiver domain ABLL_0213 SM00244 prohibitin homologues ABLL_0218 SM01018 B12 binding domain ABLL_0223 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_0223 SM00387 Histidine kinase-like ATPases ABLL_0236 SM00382 ATPases associated with a variety of cellular activities ABLL_0248 SM00387 Histidine kinase-like ATPases ABLL_0248 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0249 SM00448 cheY-homologous receiver domain ABLL_0249 SM00862 Transcriptional regulatory protein, C terminal ABLL_0252 SM00382 ATPases associated with a variety of cellular activities ABLL_0255 SM00052 Putative diguanylate phosphodiesterase ABLL_0255 SM00267 diguanylate cyclase ABLL_0258 SM00937 ABLL_0258 ABLL_0268 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABLL_0286 SM00342 helix_turn_helix, arabinose operon control protein ABLL_0291 SM00342 helix_turn_helix, arabinose operon control protein ABLL_0291 SM00871 Bacterial transcription activator, effector binding domain ABLL_0295 SM00487 DEAD-like helicases superfamily ABLL_0295 SM00490 helicase superfamily c-terminal domain ABLL_0297 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_0297 SM00387 Histidine kinase-like ATPases ABLL_0297 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0298 SM00448 cheY-homologous receiver domain ABLL_0298 SM00862 Transcriptional regulatory protein, C terminal ABLL_0300 SM00382 ATPases associated with a variety of cellular activities ABLL_0302 SM00327 von Willebrand factor (vWF) type A domain ABLL_0303 SM00387 Histidine kinase-like ATPases ABLL_0304 SM00861 Transketolase, pyrimidine binding domain ABLL_0310 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABLL_0313 SM00226 Low molecular weight phosphatase family ABLL_0318 SM00422 helix_turn_helix, mercury resistance ABLL_0322 SM00563 Phosphate acyltransferases ABLL_0323 SM00563 Phosphate acyltransferases ABLL_0325 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_0327 SM00387 Histidine kinase-like ATPases ABLL_0327 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0330 SM00248 ankyrin repeats ABLL_0332 SM00938 Nitrogen regulatory protein P-II ABLL_0334 SM00938 Nitrogen regulatory protein P-II ABLL_0350 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_0353 SM00880 ABLL_0353 ABLL_0355 SM00732 Likely ribonuclease with RNase H fold. ABLL_0373 SM00955 ABLL_0373 ABLL_0380 SM00316 Ribosomal protein S1-like RNA-binding domain ABLL_0382 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_0387 SM00947 Carbonic anhydrase ABLL_0408 SM00562 ABLL_0408 ABLL_0411 SM00357 Cold shock protein domain ABLL_0411 SM00382 ATPases associated with a variety of cellular activities ABLL_0411 SM00959 Rho termination factor, N-terminal domain ABLL_0413 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABLL_0415 SM00382 ATPases associated with a variety of cellular activities ABLL_0419 SM00267 diguanylate cyclase ABLL_0430 SM00054 EF-hand, calcium binding motif ABLL_0433 SM00341 Helicase and RNase D C-terminal ABLL_0433 SM00487 DEAD-like helicases superfamily ABLL_0433 SM00490 helicase superfamily c-terminal domain ABLL_0433 SM00956 ABLL_0433 ABLL_0435 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABLL_0452 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABLL_0454 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABLL_0468 SM00448 cheY-homologous receiver domain ABLL_0468 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_0469 SM00387 Histidine kinase-like ATPases ABLL_0469 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0469 SM00448 cheY-homologous receiver domain ABLL_0470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_0470 SM00091 PAS domain ABLL_0471 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_0471 SM00267 diguanylate cyclase ABLL_0476 SM00342 helix_turn_helix, arabinose operon control protein ABLL_0492 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABLL_0493 SM00052 Putative diguanylate phosphodiesterase ABLL_0493 SM00267 diguanylate cyclase ABLL_0496 SM00419 helix_turn_helix, cAMP Regulatory protein ABLL_0498 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_0499 SM01387 ABLL_0499 ABLL_0502 SM00881 CoA binding domain ABLL_0503 SM00387 Histidine kinase-like ATPases ABLL_0503 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0504 SM00448 cheY-homologous receiver domain ABLL_0504 SM00862 Transcriptional regulatory protein, C terminal ABLL_0507 SM00448 cheY-homologous receiver domain ABLL_0507 SM00862 Transcriptional regulatory protein, C terminal ABLL_0508 SM00387 Histidine kinase-like ATPases ABLL_0508 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0508 SM00897 FIST N domain ABLL_0508 SM01204 ABLL_0508 ABLL_0514 SM00387 Histidine kinase-like ATPases ABLL_0514 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0514 SM01049 ABLL_0514 ABLL_0515 SM00052 Putative diguanylate phosphodiesterase ABLL_0515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_0515 SM00091 PAS domain ABLL_0515 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_0515 SM00267 diguanylate cyclase ABLL_0527 SM01323 ABLL_0527 ABLL_0535 SM00487 DEAD-like helicases superfamily ABLL_0535 SM00490 helicase superfamily c-terminal domain ABLL_0537 SM00450 Rhodanese Homology Domain ABLL_0538 SM00563 Phosphate acyltransferases ABLL_0548 SM00487 DEAD-like helicases superfamily ABLL_0548 SM00490 helicase superfamily c-terminal domain ABLL_0548 SM00982 ABLL_0548 ABLL_0548 SM01058 CarD-like/TRCF domain ABLL_0551 SM00342 helix_turn_helix, arabinose operon control protein ABLL_0553 SM00091 PAS domain ABLL_0553 SM00267 diguanylate cyclase ABLL_0556 SM00448 cheY-homologous receiver domain ABLL_0556 SM00862 Transcriptional regulatory protein, C terminal ABLL_0557 SM00387 Histidine kinase-like ATPases ABLL_0559 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_0560 SM00448 cheY-homologous receiver domain ABLL_0561 SM00091 PAS domain ABLL_0562 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_0562 SM00091 PAS domain ABLL_0562 SM00387 Histidine kinase-like ATPases ABLL_0562 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0568 SM00260 Two component signalling adaptor domain ABLL_0569 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_0569 SM00448 cheY-homologous receiver domain ABLL_0575 SM00883 Chaperonin 10 Kd subunit ABLL_0577 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_0578 SM00387 Histidine kinase-like ATPases ABLL_0578 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0579 SM00448 cheY-homologous receiver domain ABLL_0579 SM00862 Transcriptional regulatory protein, C terminal ABLL_0582 SM00867 YceI-like domain ABLL_0585 SM00382 ATPases associated with a variety of cellular activities ABLL_0598 SM00382 ATPases associated with a variety of cellular activities ABLL_0599 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_0599 SM00091 PAS domain ABLL_0599 SM00448 cheY-homologous receiver domain ABLL_0599 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_0600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABLL_0600 SM00387 Histidine kinase-like ATPases ABLL_0601 SM00917 LeuA allosteric (dimerisation) domain ABLL_0602 SM00938 Nitrogen regulatory protein P-II ABLL_0604 SM01235 ABLL_0604 ABLL_0605 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABLL_0605 SM00534 ATPase domain of DNA mismatch repair MUTS family ABLL_0606 SM00342 helix_turn_helix, arabinose operon control protein ABLL_0611 SM00382 ATPases associated with a variety of cellular activities ABLL_0614 SM00267 diguanylate cyclase ABLL_0620 SM00838 Elongation factor G C-terminus ABLL_0623 SM01400 ABLL_0623 ABLL_0635 SM00479 ABLL_0635 ABLL_0636 SM00100 Cyclic nucleotide-monophosphate binding domain ABLL_0641 SM00479 ABLL_0641 ABLL_0642 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_0645 SM00448 cheY-homologous receiver domain ABLL_0645 SM00862 Transcriptional regulatory protein, C terminal ABLL_0646 SM00387 Histidine kinase-like ATPases ABLL_0646 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0646 SM01049 ABLL_0646 ABLL_0654 SM00387 Histidine kinase-like ATPases ABLL_0654 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0655 SM00327 von Willebrand factor (vWF) type A domain ABLL_0658 SM00382 ATPases associated with a variety of cellular activities ABLL_0661 SM00382 ATPases associated with a variety of cellular activities ABLL_0663 SM00072 Guanylate kinase homologues. ABLL_0664 SM00052 Putative diguanylate phosphodiesterase ABLL_0664 SM00267 diguanylate cyclase ABLL_0664 SM00448 cheY-homologous receiver domain ABLL_0668 SM00382 ATPases associated with a variety of cellular activities ABLL_0674 SM00382 ATPases associated with a variety of cellular activities ABLL_0676 SM00342 helix_turn_helix, arabinose operon control protein ABLL_0678 SM00316 Ribosomal protein S1-like RNA-binding domain ABLL_0680 SM00671 Sel1-like repeats. ABLL_0700 SM00849 Metallo-beta-lactamase superfamily ABLL_0702 SM00450 Rhodanese Homology Domain ABLL_0709 SM00052 Putative diguanylate phosphodiesterase ABLL_0709 SM00267 diguanylate cyclase ABLL_0709 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABLL_0714 SM00448 cheY-homologous receiver domain ABLL_0714 SM00862 Transcriptional regulatory protein, C terminal ABLL_0715 SM00912 haemagglutination activity domain ABLL_0722 SM00382 ATPases associated with a variety of cellular activities ABLL_0722 SM00464 Found in ATP-dependent protease La (LON) ABLL_0727 SM00226 Low molecular weight phosphatase family ABLL_0728 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_0728 SM00091 PAS domain ABLL_0728 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_0735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_0736 SM00052 Putative diguanylate phosphodiesterase ABLL_0736 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABLL_0736 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_0736 SM00091 PAS domain ABLL_0736 SM00267 diguanylate cyclase ABLL_0738 SM00878 Biotin carboxylase C-terminal domain ABLL_0748 SM00382 ATPases associated with a variety of cellular activities ABLL_0750 SM00387 Histidine kinase-like ATPases ABLL_0750 SM00388 His Kinase A (phosphoacceptor) domain ABLL_0751 SM00091 PAS domain ABLL_0755 SM00342 helix_turn_helix, arabinose operon control protein ABLL_0757 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_0759 SM00267 diguanylate cyclase ABLL_0764 SM00260 Two component signalling adaptor domain ABLL_0764 SM00448 cheY-homologous receiver domain ABLL_0769 SM00487 DEAD-like helicases superfamily ABLL_0769 SM00490 helicase superfamily c-terminal domain ABLL_0770 SM00478 endonuclease III ABLL_0784 SM00646 ABLL_0784 ABLL_0787 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_0787 SM00954 Region found in RelA / SpoT proteins ABLL_0788 SM01409 ABLL_0788 ABLL_0798 SM00387 Histidine kinase-like ATPases ABLL_0800 SM00267 diguanylate cyclase ABLL_0805 SM00984 UDP binding domain ABLL_0814 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_0837 SM00382 ATPases associated with a variety of cellular activities ABLL_0839 SM00248 ankyrin repeats ABLL_0851 SM00387 Histidine kinase-like ATPases ABLL_0852 SM00448 cheY-homologous receiver domain ABLL_0852 SM00862 Transcriptional regulatory protein, C terminal ABLL_0864 SM00899 ABLL_0864 ABLL_0868 SM00448 cheY-homologous receiver domain ABLL_0868 SM00862 Transcriptional regulatory protein, C terminal ABLL_0877 SM00448 cheY-homologous receiver domain ABLL_0877 SM00862 Transcriptional regulatory protein, C terminal ABLL_0878 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_0879 SM00912 haemagglutination activity domain ABLL_0884 SM00487 DEAD-like helicases superfamily ABLL_0884 SM00490 helicase superfamily c-terminal domain ABLL_0885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_0887 SM00382 ATPases associated with a variety of cellular activities ABLL_0896 SM00857 Resolvase, N terminal domain ABLL_0900 SM00530 Helix-turn-helix XRE-family like proteins ABLL_0934 SM00220 Serine/Threonine protein kinases, catalytic domain ABLL_0935 SM00220 Serine/Threonine protein kinases, catalytic domain ABLL_0963 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_0964 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABLL_0973 SM01403 ABLL_0973 ABLL_0977 SM01382 ABLL_0977 ABLL_0977 SM01383 ABLL_0977 ABLL_0980 SM00322 K homology RNA-binding domain ABLL_0984 SM01374 ABLL_0984 ABLL_0985 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABLL_0995 SM00316 Ribosomal protein S1-like RNA-binding domain ABLL_0997 SM00986 Uracil DNA glycosylase superfamily ABLL_0997 SM00987 UreE urease accessory protein, C-terminal domain ABLL_1001 SM00260 Two component signalling adaptor domain ABLL_1002 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_1005 SM00852 Probable molybdopterin binding domain ABLL_1006 SM00671 Sel1-like repeats. ABLL_1007 SM01005 Alanine racemase, C-terminal domain ABLL_1008 SM00465 GIY-YIG type nucleases (URI domain) ABLL_1010 SM00267 diguanylate cyclase ABLL_1014 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1016 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1017 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1017 SM01049 ABLL_1017 ABLL_1019 SM00448 cheY-homologous receiver domain ABLL_1019 SM00862 Transcriptional regulatory protein, C terminal ABLL_1020 SM00387 Histidine kinase-like ATPases ABLL_1020 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1020 SM00448 cheY-homologous receiver domain ABLL_1021 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABLL_1021 SM00387 Histidine kinase-like ATPases ABLL_1021 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1021 SM00448 cheY-homologous receiver domain ABLL_1035 SM00382 ATPases associated with a variety of cellular activities ABLL_1040 SM00382 ATPases associated with a variety of cellular activities ABLL_1041 SM00382 ATPases associated with a variety of cellular activities ABLL_1043 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABLL_1050 SM00988 UreE urease accessory protein, N-terminal domain ABLL_1058 SM00347 helix_turn_helix multiple antibiotic resistance protein ABLL_1060 SM00267 diguanylate cyclase ABLL_1080 SM00448 cheY-homologous receiver domain ABLL_1080 SM00862 Transcriptional regulatory protein, C terminal ABLL_1081 SM00387 Histidine kinase-like ATPases ABLL_1081 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1087 SM00479 ABLL_1087 ABLL_1099 SM00091 PAS domain ABLL_1100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1102 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABLL_1105 SM01130 ABLL_1105 ABLL_1109 SM00382 ATPases associated with a variety of cellular activities ABLL_1115 SM00382 ATPases associated with a variety of cellular activities ABLL_1119 SM00869 Autotransporter beta-domain ABLL_1124 SM00052 Putative diguanylate phosphodiesterase ABLL_1124 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1124 SM00091 PAS domain ABLL_1124 SM00267 diguanylate cyclase ABLL_1126 SM00382 ATPases associated with a variety of cellular activities ABLL_1126 SM00962 SRP54-type protein, GTPase domain ABLL_1129 SM00322 K homology RNA-binding domain ABLL_1129 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_1138 SM00448 cheY-homologous receiver domain ABLL_1138 SM00862 Transcriptional regulatory protein, C terminal ABLL_1139 SM00387 Histidine kinase-like ATPases ABLL_1139 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1141 SM00267 diguanylate cyclase ABLL_1143 SM00382 ATPases associated with a variety of cellular activities ABLL_1154 SM00347 helix_turn_helix multiple antibiotic resistance protein ABLL_1159 SM00474 3'-5' exonuclease ABLL_1165 SM00563 Phosphate acyltransferases ABLL_1179 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABLL_1179 SM00895 ABLL_1179 ABLL_1193 SM01144 ABLL_1193 ABLL_1209 SM00487 DEAD-like helicases superfamily ABLL_1209 SM00490 helicase superfamily c-terminal domain ABLL_1210 SM00052 Putative diguanylate phosphodiesterase ABLL_1210 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1210 SM00091 PAS domain ABLL_1210 SM00267 diguanylate cyclase ABLL_1212 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1222 SM00857 Resolvase, N terminal domain ABLL_1225 SM00382 ATPases associated with a variety of cellular activities ABLL_1225 SM01086 C-terminal, D2-small domain, of ClpB protein ABLL_1228 SM00257 Lysin motif ABLL_1236 SM00460 Transglutaminase/protease-like homologues ABLL_1237 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABLL_1239 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABLL_1246 SM00450 Rhodanese Homology Domain ABLL_1247 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1247 SM00387 Histidine kinase-like ATPases ABLL_1260 SM00842 Cell division protein FtsA ABLL_1261 SM00864 Tubulin/FtsZ family, GTPase domain ABLL_1261 SM00865 Tubulin/FtsZ family, C-terminal domain ABLL_1272 SM00851 MGS-like domain ABLL_1272 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABLL_1300 SM00034 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) ABLL_1317 SM00477 DNA/RNA non-specific endonuclease ABLL_1317 SM00892 DNA/RNA non-specific endonuclease ABLL_1320 SM00530 Helix-turn-helix XRE-family like proteins ABLL_1332 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_1346 SM00382 ATPases associated with a variety of cellular activities ABLL_1348 SM00422 helix_turn_helix, mercury resistance ABLL_1349 SM00271 DnaJ molecular chaperone homology domain ABLL_1350 SM00091 PAS domain ABLL_1350 SM00387 Histidine kinase-like ATPases ABLL_1352 SM00448 cheY-homologous receiver domain ABLL_1378 SM00411 bacterial (prokaryotic) histone like domain ABLL_1379 SM01007 Class II Aldolase and Adducin N-terminal domain ABLL_1395 SM00957 SecA DEAD-like domain ABLL_1395 SM00958 SecA preprotein cross-linking domain ABLL_1397 SM00342 helix_turn_helix, arabinose operon control protein ABLL_1400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1400 SM00091 PAS domain ABLL_1400 SM00387 Histidine kinase-like ATPases ABLL_1400 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1404 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABLL_1405 SM00052 Putative diguanylate phosphodiesterase ABLL_1406 SM00220 Serine/Threonine protein kinases, catalytic domain ABLL_1406 SM00331 Sigma factor PP2C-like phosphatases ABLL_1406 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ABLL_1410 SM00267 diguanylate cyclase ABLL_1414 SM00448 cheY-homologous receiver domain ABLL_1414 SM00862 Transcriptional regulatory protein, C terminal ABLL_1416 SM00448 cheY-homologous receiver domain ABLL_1416 SM00862 Transcriptional regulatory protein, C terminal ABLL_1430 SM00919 Malic enzyme, NAD binding domain ABLL_1430 SM01274 ABLL_1430 ABLL_1434 SM00448 cheY-homologous receiver domain ABLL_1434 SM00862 Transcriptional regulatory protein, C terminal ABLL_1435 SM00387 Histidine kinase-like ATPases ABLL_1436 SM00244 prohibitin homologues ABLL_1467 SM00382 ATPases associated with a variety of cellular activities ABLL_1474 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1474 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABLL_1484 SM00852 Probable molybdopterin binding domain ABLL_1493 SM00267 diguanylate cyclase ABLL_1500 SM00843 ABLL_1500 ABLL_1501 SM00448 cheY-homologous receiver domain ABLL_1501 SM00862 Transcriptional regulatory protein, C terminal ABLL_1509 SM00054 EF-hand, calcium binding motif ABLL_1514 SM01209 ABLL_1514 ABLL_1514 SM01210 ABLL_1514 ABLL_1518 SM00316 Ribosomal protein S1-like RNA-binding domain ABLL_1518 SM00322 K homology RNA-binding domain ABLL_1519 SM00448 cheY-homologous receiver domain ABLL_1520 SM00073 Histidine Phosphotransfer domain ABLL_1520 SM00260 Two component signalling adaptor domain ABLL_1520 SM00387 Histidine kinase-like ATPases ABLL_1520 SM01231 ABLL_1520 ABLL_1521 SM00138 Methyltransferase, chemotaxis proteins ABLL_1523 SM00448 cheY-homologous receiver domain ABLL_1531 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_1567 SM01004 Delta-aminolevulinic acid dehydratase ABLL_1568 SM00091 PAS domain ABLL_1568 SM00387 Histidine kinase-like ATPases ABLL_1569 SM00448 cheY-homologous receiver domain ABLL_1569 SM00862 Transcriptional regulatory protein, C terminal ABLL_1574 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_1582 SM00271 DnaJ molecular chaperone homology domain ABLL_1586 SM00479 ABLL_1586 ABLL_1598 SM00448 cheY-homologous receiver domain ABLL_1599 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABLL_1599 SM00474 3'-5' exonuclease ABLL_1599 SM00475 5'-3' exonuclease ABLL_1599 SM00482 DNA polymerase A domain ABLL_1601 SM00052 Putative diguanylate phosphodiesterase ABLL_1601 SM00267 diguanylate cyclase ABLL_1602 SM00267 diguanylate cyclase ABLL_1602 SM00448 cheY-homologous receiver domain ABLL_1603 SM00382 ATPases associated with a variety of cellular activities ABLL_1606 SM00363 S4 RNA-binding domain ABLL_1610 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABLL_1611 SM00631 ABLL_1611 ABLL_1615 SM00448 cheY-homologous receiver domain ABLL_1615 SM00862 Transcriptional regulatory protein, C terminal ABLL_1616 SM00387 Histidine kinase-like ATPases ABLL_1616 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1618 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1618 SM00387 Histidine kinase-like ATPases ABLL_1622 SM00271 DnaJ molecular chaperone homology domain ABLL_1627 SM00849 Metallo-beta-lactamase superfamily ABLL_1628 SM00267 diguanylate cyclase ABLL_1629 SM00267 diguanylate cyclase ABLL_1632 SM00448 cheY-homologous receiver domain ABLL_1632 SM00862 Transcriptional regulatory protein, C terminal ABLL_1633 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_1633 SM00091 PAS domain ABLL_1633 SM00387 Histidine kinase-like ATPases ABLL_1633 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1636 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1637 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABLL_1637 SM00292 breast cancer carboxy-terminal domain ABLL_1637 SM00532 Ligase N family ABLL_1638 SM00387 Histidine kinase-like ATPases ABLL_1638 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1639 SM00387 Histidine kinase-like ATPases ABLL_1639 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1639 SM00448 cheY-homologous receiver domain ABLL_1640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1640 SM00091 PAS domain ABLL_1640 SM00448 cheY-homologous receiver domain ABLL_1640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_1642 SM00382 ATPases associated with a variety of cellular activities ABLL_1645 SM00342 helix_turn_helix, arabinose operon control protein ABLL_1646 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_1646 SM00267 diguanylate cyclase ABLL_1647 SM00448 cheY-homologous receiver domain ABLL_1647 SM00862 Transcriptional regulatory protein, C terminal ABLL_1648 SM00260 Two component signalling adaptor domain ABLL_1648 SM01231 ABLL_1648 ABLL_1649 SM00387 Histidine kinase-like ATPases ABLL_1650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABLL_1650 SM00387 Histidine kinase-like ATPases ABLL_1650 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1652 SM00862 Transcriptional regulatory protein, C terminal ABLL_1663 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABLL_1663 SM00267 diguanylate cyclase ABLL_1665 SM00342 helix_turn_helix, arabinose operon control protein ABLL_1666 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_1666 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1666 SM00091 PAS domain ABLL_1666 SM00267 diguanylate cyclase ABLL_1673 SM00387 Histidine kinase-like ATPases ABLL_1678 SM00829 Enoylreductase ABLL_1679 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_1684 SM00382 ATPases associated with a variety of cellular activities ABLL_1686 SM00267 diguanylate cyclase ABLL_1687 SM00871 Bacterial transcription activator, effector binding domain ABLL_1697 SM00830 Chorismate mutase type II ABLL_1700 SM00382 ATPases associated with a variety of cellular activities ABLL_1701 SM00448 cheY-homologous receiver domain ABLL_1701 SM00862 Transcriptional regulatory protein, C terminal ABLL_1702 SM00387 Histidine kinase-like ATPases ABLL_1707 SM00463 Small MutS-related domain ABLL_1707 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABLL_1707 SM00534 ATPase domain of DNA mismatch repair MUTS family ABLL_1710 SM00852 Probable molybdopterin binding domain ABLL_1712 SM00382 ATPases associated with a variety of cellular activities ABLL_1713 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_1716 SM00052 Putative diguanylate phosphodiesterase ABLL_1716 SM00267 diguanylate cyclase ABLL_1718 SM00237 Domains in Na-Ca exchangers and integrin-beta4 ABLL_1719 SM00421 helix_turn_helix, Lux Regulon ABLL_1721 SM00382 ATPases associated with a variety of cellular activities ABLL_1724 SM00448 cheY-homologous receiver domain ABLL_1724 SM00862 Transcriptional regulatory protein, C terminal ABLL_1725 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_1725 SM00091 PAS domain ABLL_1725 SM00387 Histidine kinase-like ATPases ABLL_1727 SM00490 helicase superfamily c-terminal domain ABLL_1728 SM00530 Helix-turn-helix XRE-family like proteins ABLL_1729 SM00267 diguanylate cyclase ABLL_1732 SM00448 cheY-homologous receiver domain ABLL_1732 SM00850 LytTr DNA-binding domain ABLL_1738 SM00479 ABLL_1738 ABLL_1743 SM00387 Histidine kinase-like ATPases ABLL_1743 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1744 SM00448 cheY-homologous receiver domain ABLL_1744 SM00862 Transcriptional regulatory protein, C terminal ABLL_1747 SM00862 Transcriptional regulatory protein, C terminal ABLL_1748 SM00382 ATPases associated with a variety of cellular activities ABLL_1753 SM00271 DnaJ molecular chaperone homology domain ABLL_1756 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1756 SM00091 PAS domain ABLL_1756 SM00387 Histidine kinase-like ATPases ABLL_1756 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1757 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_1758 SM00271 DnaJ molecular chaperone homology domain ABLL_1761 SM00736 Dystroglycan-type cadherin-like domains. ABLL_1764 SM00448 cheY-homologous receiver domain ABLL_1764 SM00862 Transcriptional regulatory protein, C terminal ABLL_1765 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_1768 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_1768 SM01240 ABLL_1768 ABLL_1771 SM00662 RNA polymerases D ABLL_1772 SM00363 S4 RNA-binding domain ABLL_1772 SM01390 ABLL_1772 ABLL_1778 SM01329 ABLL_1778 ABLL_1789 SM00363 S4 RNA-binding domain ABLL_1790 SM00060 Fibronectin type 3 domain ABLL_1792 SM00382 ATPases associated with a variety of cellular activities ABLL_1797 SM00382 ATPases associated with a variety of cellular activities ABLL_1799 SM00487 DEAD-like helicases superfamily ABLL_1799 SM00490 helicase superfamily c-terminal domain ABLL_1804 SM00267 diguanylate cyclase ABLL_1814 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1820 SM00796 Allophanate hydrolase subunit 1 ABLL_1820 SM00797 Allophanate hydrolase subunit 2 ABLL_1820 SM00878 Biotin carboxylase C-terminal domain ABLL_1823 SM00382 ATPases associated with a variety of cellular activities ABLL_1827 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_1832 SM00981 ABLL_1832 ABLL_1837 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_1854 SM00646 ABLL_1854 ABLL_1895 SM00487 DEAD-like helicases superfamily ABLL_1895 SM00490 helicase superfamily c-terminal domain ABLL_1902 SM00965 Secretin and TonB N terminus short domain ABLL_1925 SM00267 diguanylate cyclase ABLL_1926 SM00173 Ras subfamily of RAS small GTPases ABLL_1926 SM00175 Rab subfamily of small GTPases ABLL_1947 SM00644 ABLL_1947 ABLL_1952 SM00342 helix_turn_helix, arabinose operon control protein ABLL_1954 SM00671 Sel1-like repeats. ABLL_1956 SM00671 Sel1-like repeats. ABLL_1961 SM00100 Cyclic nucleotide-monophosphate binding domain ABLL_1964 SM00487 DEAD-like helicases superfamily ABLL_1964 SM00490 helicase superfamily c-terminal domain ABLL_1968 SM00530 Helix-turn-helix XRE-family like proteins ABLL_1974 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_1987 SM00448 cheY-homologous receiver domain ABLL_1988 SM00387 Histidine kinase-like ATPases ABLL_1988 SM00448 cheY-homologous receiver domain ABLL_1989 SM00387 Histidine kinase-like ATPases ABLL_1989 SM00388 His Kinase A (phosphoacceptor) domain ABLL_1994 SM00387 Histidine kinase-like ATPases ABLL_1994 SM01049 ABLL_1994 ABLL_1996 SM00052 Putative diguanylate phosphodiesterase ABLL_1996 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_1996 SM00267 diguanylate cyclase ABLL_1997 SM00670 Large family of predicted nucleotide-binding domains ABLL_2002 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_2002 SM00091 PAS domain ABLL_2002 SM00267 diguanylate cyclase ABLL_2003 SM00487 DEAD-like helicases superfamily ABLL_2003 SM00490 helicase superfamily c-terminal domain ABLL_2006 SM00052 Putative diguanylate phosphodiesterase ABLL_2008 SM00797 Allophanate hydrolase subunit 2 ABLL_2009 SM00796 Allophanate hydrolase subunit 1 ABLL_2014 SM00448 cheY-homologous receiver domain ABLL_2014 SM00862 Transcriptional regulatory protein, C terminal ABLL_2015 SM00387 Histidine kinase-like ATPases ABLL_2015 SM01049 ABLL_2015 ABLL_2020 SM00382 ATPases associated with a variety of cellular activities ABLL_2026 SM00387 Histidine kinase-like ATPases ABLL_2031 SM00248 ankyrin repeats ABLL_2032 SM01060 ABLL_2032 ABLL_2037 SM00052 Putative diguanylate phosphodiesterase ABLL_2037 SM00267 diguanylate cyclase ABLL_2047 SM00965 Secretin and TonB N terminus short domain ABLL_2052 SM00342 helix_turn_helix, arabinose operon control protein ABLL_2054 SM01131 ABLL_2054 ABLL_2058 SM00448 cheY-homologous receiver domain ABLL_2058 SM00862 Transcriptional regulatory protein, C terminal ABLL_2059 SM00387 Histidine kinase-like ATPases ABLL_2062 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABLL_2072 SM00382 ATPases associated with a variety of cellular activities ABLL_2078 SM00470 ParB-like nuclease domain ABLL_2088 SM00400 zinc finger ABLL_2088 SM00493 ABLL_2088 ABLL_2090 SM00358 Double-stranded RNA binding motif ABLL_2090 SM00535 Ribonuclease III family ABLL_2095 SM00855 Phosphoglycerate mutase family ABLL_2098 SM01245 ABLL_2098 ABLL_2103 SM00382 ATPases associated with a variety of cellular activities ABLL_2103 SM01086 C-terminal, D2-small domain, of ClpB protein ABLL_2104 SM00387 Histidine kinase-like ATPases ABLL_2113 SM00382 ATPases associated with a variety of cellular activities ABLL_2125 SM00357 Cold shock protein domain ABLL_2127 SM00448 cheY-homologous receiver domain ABLL_2128 SM00448 cheY-homologous receiver domain ABLL_2129 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_2129 SM00387 Histidine kinase-like ATPases ABLL_2129 SM00388 His Kinase A (phosphoacceptor) domain ABLL_2129 SM00448 cheY-homologous receiver domain ABLL_2135 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_2135 SM00387 Histidine kinase-like ATPases ABLL_2135 SM00388 His Kinase A (phosphoacceptor) domain ABLL_2136 SM00798 AICARFT/IMPCHase bienzyme ABLL_2136 SM00851 MGS-like domain ABLL_2137 SM00267 diguanylate cyclase ABLL_2149 SM00382 ATPases associated with a variety of cellular activities ABLL_2158 SM00028 Tetratricopeptide repeats ABLL_2158 SM00327 von Willebrand factor (vWF) type A domain ABLL_2183 SM00240 Forkhead associated domain ABLL_2185 SM00382 ATPases associated with a variety of cellular activities ABLL_2185 SM01086 C-terminal, D2-small domain, of ClpB protein ABLL_2199 SM00382 ATPases associated with a variety of cellular activities ABLL_2208 SM00448 cheY-homologous receiver domain ABLL_2208 SM00862 Transcriptional regulatory protein, C terminal ABLL_2209 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2210 SM00052 Putative diguanylate phosphodiesterase ABLL_2210 SM00091 PAS domain ABLL_2210 SM00267 diguanylate cyclase ABLL_2211 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_2211 SM00387 Histidine kinase-like ATPases ABLL_2212 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2220 SM00862 Transcriptional regulatory protein, C terminal ABLL_2227 SM00342 helix_turn_helix, arabinose operon control protein ABLL_2235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2237 SM01049 ABLL_2237 ABLL_2238 SM00387 Histidine kinase-like ATPases ABLL_2238 SM00388 His Kinase A (phosphoacceptor) domain ABLL_2256 SM00387 Histidine kinase-like ATPases ABLL_2257 SM00448 cheY-homologous receiver domain ABLL_2257 SM00862 Transcriptional regulatory protein, C terminal ABLL_2267 SM00899 ABLL_2267 ABLL_2274 SM00382 ATPases associated with a variety of cellular activities ABLL_2276 SM00450 Rhodanese Homology Domain ABLL_2281 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABLL_2282 SM00434 DNA Topoisomerase IV ABLL_2295 SM00984 UDP binding domain ABLL_2307 SM00387 Histidine kinase-like ATPases ABLL_2307 SM01049 ABLL_2307 ABLL_2308 SM00448 cheY-homologous receiver domain ABLL_2308 SM00862 Transcriptional regulatory protein, C terminal ABLL_2314 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_2314 SM00387 Histidine kinase-like ATPases ABLL_2315 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABLL_2318 SM00267 diguanylate cyclase ABLL_2329 SM00382 ATPases associated with a variety of cellular activities ABLL_2339 SM00112 Cadherin repeats. ABLL_2340 SM00112 Cadherin repeats. ABLL_2342 SM00363 S4 RNA-binding domain ABLL_2343 SM00904 Riboflavin kinase ABLL_2349 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABLL_2349 SM00267 diguanylate cyclase ABLL_2352 SM00382 ATPases associated with a variety of cellular activities ABLL_2352 SM01086 C-terminal, D2-small domain, of ClpB protein ABLL_2361 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2370 SM00382 ATPases associated with a variety of cellular activities ABLL_2379 SM00382 ATPases associated with a variety of cellular activities ABLL_2379 SM00962 SRP54-type protein, GTPase domain ABLL_2387 SM00028 Tetratricopeptide repeats ABLL_2399 SM00448 cheY-homologous receiver domain ABLL_2406 SM00382 ATPases associated with a variety of cellular activities ABLL_2406 SM00962 SRP54-type protein, GTPase domain ABLL_2406 SM00963 SRP54-type protein, helical bundle domain ABLL_2413 SM01001 AIR carboxylase ABLL_2416 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2416 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABLL_2416 SM01049 ABLL_2416 ABLL_2419 SM00838 Elongation factor G C-terminus ABLL_2419 SM00889 Elongation factor G, domain IV ABLL_2424 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2425 SM01049 ABLL_2425 ABLL_2426 SM00382 ATPases associated with a variety of cellular activities ABLL_2433 SM00736 Dystroglycan-type cadherin-like domains. ABLL_2443 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABLL_2450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_2451 SM00448 cheY-homologous receiver domain ABLL_2451 SM00862 Transcriptional regulatory protein, C terminal ABLL_2452 SM00100 Cyclic nucleotide-monophosphate binding domain ABLL_2461 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_2461 SM00091 PAS domain ABLL_2462 SM00448 cheY-homologous receiver domain ABLL_2462 SM00862 Transcriptional regulatory protein, C terminal ABLL_2463 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2465 SM01329 ABLL_2465 ABLL_2468 SM00663 RNA polymerase I subunit A N-terminus ABLL_2473 SM00649 Ribosomal protein L11/L12 ABLL_2474 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ABLL_2481 SM00382 ATPases associated with a variety of cellular activities ABLL_2483 SM01230 ABLL_2483 ABLL_2485 SM00267 diguanylate cyclase ABLL_2485 SM00448 cheY-homologous receiver domain ABLL_2499 SM00382 ATPases associated with a variety of cellular activities ABLL_2500 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_2500 SM00267 diguanylate cyclase ABLL_2505 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABLL_2507 SM00316 Ribosomal protein S1-like RNA-binding domain ABLL_2507 SM00732 Likely ribonuclease with RNase H fold. ABLL_2511 SM00342 helix_turn_helix, arabinose operon control protein ABLL_2511 SM00871 Bacterial transcription activator, effector binding domain ABLL_2532 SM00852 Probable molybdopterin binding domain ABLL_2536 SM00822 ABLL_2536 ABLL_2538 SM00825 Beta-ketoacyl synthase ABLL_2542 SM00874 tRNA synthetase B5 domain ABLL_2542 SM00896 Ferredoxin-fold anticodon binding domain ABLL_2545 SM00316 Ribosomal protein S1-like RNA-binding domain ABLL_2547 SM00841 Elongation factor P, C-terminal ABLL_2547 SM01185 ABLL_2547 ABLL_2560 SM01207 ABLL_2560 ABLL_2561 SM00905 Dihydroneopterin aldolase ABLL_2564 SM00937 ABLL_2564 ABLL_2569 SM00347 helix_turn_helix multiple antibiotic resistance protein ABLL_2583 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_2588 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABLL_2602 SM00861 Transketolase, pyrimidine binding domain ABLL_2604 SM00830 Chorismate mutase type II ABLL_2609 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABLL_2612 SM00836 DALR anticodon binding domain ABLL_2612 SM01016 Arginyl tRNA synthetase N terminal dom ABLL_2615 SM00563 Phosphate acyltransferases ABLL_2617 SM01211 ABLL_2617 ABLL_2620 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABLL_2620 SM00245 tail specific protease ABLL_2626 SM00382 ATPases associated with a variety of cellular activities ABLL_2629 SM00387 Histidine kinase-like ATPases ABLL_2629 SM00388 His Kinase A (phosphoacceptor) domain ABLL_2630 SM00052 Putative diguanylate phosphodiesterase ABLL_2630 SM00267 diguanylate cyclase ABLL_2634 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABLL_2635 SM00448 cheY-homologous receiver domain ABLL_2635 SM00862 Transcriptional regulatory protein, C terminal ABLL_2636 SM00387 Histidine kinase-like ATPases ABLL_2636 SM00388 His Kinase A (phosphoacceptor) domain ABLL_2640 SM00530 Helix-turn-helix XRE-family like proteins ABLL_2643 SM00387 Histidine kinase-like ATPases ABLL_2657 SM00450 Rhodanese Homology Domain ABLL_2661 SM00052 Putative diguanylate phosphodiesterase ABLL_2661 SM00267 diguanylate cyclase ABLL_2664 SM00925 MltA specific insert domain ABLL_2670 SM00448 cheY-homologous receiver domain ABLL_2670 SM00862 Transcriptional regulatory protein, C terminal ABLL_2671 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_2671 SM00091 PAS domain ABLL_2671 SM00387 Histidine kinase-like ATPases ABLL_2678 SM00248 ankyrin repeats ABLL_2679 SM00487 DEAD-like helicases superfamily ABLL_2679 SM00490 helicase superfamily c-terminal domain ABLL_2688 SM00116 Domain in cystathionine beta-synthase and other proteins. ABLL_2690 SM00382 ATPases associated with a variety of cellular activities ABLL_2691 SM01192 ABLL_2691 ABLL_2691 SM01193 ABLL_2691 ABLL_2695 SM00729 Elongator protein 3, MiaB family, Radical SAM ABLL_2695 SM00876 Biotin and Thiamin Synthesis associated domain ABLL_2697 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABLL_2697 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABLL_2697 SM00493 ABLL_2697 ABLL_2708 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABLL_2715 SM00382 ATPases associated with a variety of cellular activities ABLL_2718 SM00671 Sel1-like repeats. ABLL_2723 SM00518 AP endonuclease family 2 ABLL_2731 SM00382 ATPases associated with a variety of cellular activities ABLL_2731 SM00994 ClpX C4-type zinc finger ABLL_2731 SM01086 C-terminal, D2-small domain, of ClpB protein ABLL_2735 SM01228 ABLL_2735 ABLL_2746 SM00481 DNA polymerase alpha chain like domain ABLL_2765 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABLL_2768 SM00100 Cyclic nucleotide-monophosphate binding domain ABLL_2768 SM00419 helix_turn_helix, cAMP Regulatory protein ABLL_2770 SM00986 Uracil DNA glycosylase superfamily ABLL_2770 SM00987 UreE urease accessory protein, C-terminal domain ABLL_2779 SM00347 helix_turn_helix multiple antibiotic resistance protein ABLL_2782 SM00062 Bacterial periplasmic substrate-binding proteins ABLL_2782 SM00387 Histidine kinase-like ATPases ABLL_2783 SM00448 cheY-homologous receiver domain ABLL_2783 SM00862 Transcriptional regulatory protein, C terminal ABLL_2784 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2785 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABLL_2785 SM00091 PAS domain ABLL_2785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABLL_2785 SM00897 FIST N domain ABLL_2785 SM01204 ABLL_2785 ABLL_2788 SM00267 diguanylate cyclase ABLL_2797 SM00382 ATPases associated with a variety of cellular activities ABLL_2812 SM00460 Transglutaminase/protease-like homologues ABLL_2814 SM00460 Transglutaminase/protease-like homologues ABLL_2815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABLL_2816 SM00382 ATPases associated with a variety of cellular activities ABLL_2819 SM00052 Putative diguanylate phosphodiesterase ABLL_2835 SM00448 cheY-homologous receiver domain ABLL_2835 SM00862 Transcriptional regulatory protein, C terminal ABLL_2836 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABLL_2836 SM00387 Histidine kinase-like ATPases ABLL_2838 SM00342 helix_turn_helix, arabinose operon control protein ABLL_2839 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif.