locus-tag class description AVENP_0001 PF08299 Bacterial dnaA protein helix-turn-helix AVENP_0001 PF11638 DnaA N-terminal domain AVENP_0001 PF00308 Bacterial dnaA protein AVENP_0002 PF02767 DNA polymerase III beta subunit, central domain AVENP_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain AVENP_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain AVENP_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0003 PF00986 DNA gyrase B subunit, carboxyl terminus AVENP_0003 PF00204 DNA gyrase B AVENP_0003 PF01751 Toprim domain AVENP_0004 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_0005 PF14489 QueF-like protein AVENP_0009 PF00892 EamA-like transporter family AVENP_0010 PF09335 SNARE associated Golgi protein AVENP_0011 PF12838 4Fe-4S dicluster domain AVENP_0012 PF07724 AAA domain (Cdc48 subfamily) AVENP_0012 PF06689 ClpX C4-type zinc finger AVENP_0012 PF10431 C-terminal, D2-small domain, of ClpB protein AVENP_0015 PF00990 Diguanylate cyclase, GGDEF domain AVENP_0015 PF08448 PAS fold AVENP_0015 PF00563 EAL domain AVENP_0017 PF02954 Bacterial regulatory protein, Fis family AVENP_0017 PF00158 Sigma-54 interaction domain AVENP_0017 PF01590 GAF domain AVENP_0019 PF00890 FAD binding domain AVENP_0019 PF02910 Fumarate reductase flavoprotein C-term AVENP_0020 PF00248 Aldo/keto reductase family AVENP_0021 PF03459 TOBE domain AVENP_0021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVENP_0022 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVENP_0022 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVENP_0023 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0026 PF13649 Methyltransferase domain AVENP_0027 PF00005 ABC transporter AVENP_0030 PF00296 Luciferase-like monooxygenase AVENP_0031 PF00593 TonB dependent receptor AVENP_0031 PF07715 TonB-dependent Receptor Plug Domain AVENP_0032 PF00005 ABC transporter AVENP_0032 PF08402 TOBE domain AVENP_0033 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVENP_0036 PF03459 TOBE domain AVENP_0037 PF11844 Domain of unknown function (DUF3364) AVENP_0037 PF00148 Nitrogenase component 1 type Oxidoreductase AVENP_0038 PF00148 Nitrogenase component 1 type Oxidoreductase AVENP_0040 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AVENP_0041 PF03976 Polyphosphate kinase 2 (PPK2) AVENP_0043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0043 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0044 PF08447 PAS fold AVENP_0044 PF13426 PAS domain AVENP_0045 PF04552 Sigma-54, DNA binding domain AVENP_0045 PF04963 Sigma-54 factor, core binding domain AVENP_0045 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVENP_0046 PF00111 2Fe-2S iron-sulfur cluster binding domain AVENP_0048 PF04319 NifZ domain AVENP_0049 PF03206 Nitrogen fixation protein NifW AVENP_0050 PF00258 Flavodoxin AVENP_0051 PF03270 Protein of unknown function, DUF269 AVENP_0052 PF02579 Dinitrogenase iron-molybdenum cofactor AVENP_0057 PF00148 Nitrogenase component 1 type Oxidoreductase AVENP_0058 PF02203 Tar ligand binding domain homologue AVENP_0058 PF00672 HAMP domain AVENP_0058 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0059 PF08447 PAS fold AVENP_0059 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0060 PF00148 Nitrogenase component 1 type Oxidoreductase AVENP_0063 PF02579 Dinitrogenase iron-molybdenum cofactor AVENP_0064 PF00753 Metallo-beta-lactamase superfamily AVENP_0064 PF00258 Flavodoxin AVENP_0066 PF04055 Radical SAM superfamily AVENP_0066 PF02579 Dinitrogenase iron-molybdenum cofactor AVENP_0069 PF00682 HMGL-like AVENP_0075 PF00849 RNA pseudouridylate synthase AVENP_0076 PF10397 Adenylosuccinate lyase C-terminus AVENP_0076 PF00206 Lyase AVENP_0077 PF03477 ATP cone domain AVENP_0077 PF02867 Ribonucleotide reductase, barrel domain AVENP_0077 PF00317 Ribonucleotide reductase, all-alpha domain AVENP_0078 PF00268 Ribonucleotide reductase, small chain AVENP_0081 PF01810 LysE type translocator AVENP_0082 PF12833 Helix-turn-helix domain AVENP_0083 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVENP_0086 PF01928 CYTH domain AVENP_0087 PF03063 Prismane/CO dehydrogenase family AVENP_0089 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVENP_0089 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_0090 PF00691 OmpA family AVENP_0090 PF01389 OmpA-like transmembrane domain AVENP_0092 PF00107 Zinc-binding dehydrogenase AVENP_0092 PF08240 Alcohol dehydrogenase GroES-like domain AVENP_0094 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVENP_0094 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVENP_0095 PF02637 GatB domain AVENP_0095 PF02934 GatB/GatE catalytic domain AVENP_0098 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVENP_0100 PF03480 Bacterial extracellular solute-binding protein, family 7 AVENP_0101 PF00486 Transcriptional regulatory protein, C terminal AVENP_0101 PF00072 Response regulator receiver domain AVENP_0102 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0102 PF00989 PAS fold AVENP_0102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0103 PF02589 LUD domain AVENP_0104 PF11870 Domain of unknown function (DUF3390) AVENP_0104 PF13183 4Fe-4S dicluster domain AVENP_0104 PF02589 LUD domain AVENP_0105 PF02754 Cysteine-rich domain AVENP_0107 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVENP_0108 PF00364 Biotin-requiring enzyme AVENP_0109 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVENP_0109 PF02785 Biotin carboxylase C-terminal domain AVENP_0109 PF00289 Biotin carboxylase, N-terminal domain AVENP_0110 PF00271 Helicase conserved C-terminal domain AVENP_0110 PF00270 DEAD/DEAH box helicase AVENP_0111 PF01384 Phosphate transporter family AVENP_0113 PF13537 Glutamine amidotransferase domain AVENP_0113 PF00733 Asparagine synthase AVENP_0115 PF00881 Nitroreductase family AVENP_0116 PF03480 Bacterial extracellular solute-binding protein, family 7 AVENP_0117 PF13085 2Fe-2S iron-sulfur cluster binding domain AVENP_0118 PF02910 Fumarate reductase flavoprotein C-term AVENP_0118 PF00890 FAD binding domain AVENP_0120 PF13638 PIN domain AVENP_0120 PF02562 PhoH-like protein AVENP_0122 PF12002 MgsA AAA+ ATPase C terminal AVENP_0122 PF01661 Macro domain AVENP_0122 PF16193 AAA C-terminal domain AVENP_0122 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVENP_0123 PF00849 RNA pseudouridylate synthase AVENP_0123 PF01479 S4 domain AVENP_0124 PF00571 CBS domain AVENP_0124 PF01380 SIS domain AVENP_0125 PF00753 Metallo-beta-lactamase superfamily AVENP_0125 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVENP_0125 PF17770 Ribonuclease J C-terminal domain AVENP_0126 PF00398 Ribosomal RNA adenine dimethylase AVENP_0127 PF00977 Histidine biosynthesis protein AVENP_0130 PF04055 Radical SAM superfamily AVENP_0131 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVENP_0132 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AVENP_0133 PF00072 Response regulator receiver domain AVENP_0133 PF00486 Transcriptional regulatory protein, C terminal AVENP_0134 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0138 PF00873 AcrB/AcrD/AcrF family AVENP_0139 PF04264 YceI-like domain AVENP_0141 PF01554 MatE AVENP_0142 PF01842 ACT domain AVENP_0142 PF00742 Homoserine dehydrogenase AVENP_0142 PF03447 Homoserine dehydrogenase, NAD binding domain AVENP_0143 PF00155 Aminotransferase class I and II AVENP_0145 PF00588 SpoU rRNA Methylase family AVENP_0145 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVENP_0146 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVENP_0147 PF01197 Ribosomal protein L31 AVENP_0161 PF00437 Type II/IV secretion system protein AVENP_0167 PF02222 ATP-grasp domain AVENP_0168 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVENP_0169 PF01678 Diaminopimelate epimerase AVENP_0170 PF01121 Dephospho-CoA kinase AVENP_0171 PF17284 Spermidine synthase tetramerisation domain AVENP_0172 PF02769 AIR synthase related protein, C-terminal domain AVENP_0172 PF00586 AIR synthase related protein, N-terminal domain AVENP_0173 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVENP_0173 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVENP_0175 PF04264 YceI-like domain AVENP_0176 PF01047 MarR family AVENP_0177 PF02678 Pirin AVENP_0177 PF17954 Quercetinase C-terminal cupin domain AVENP_0179 PF04264 YceI-like domain AVENP_0180 PF00266 Aminotransferase class-V AVENP_0181 PF13393 Histidyl-tRNA synthetase AVENP_0182 PF00709 Adenylosuccinate synthetase AVENP_0184 PF00117 Glutamine amidotransferase class-I AVENP_0184 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVENP_0185 PF04608 Phosphatidylglycerophosphatase A AVENP_0187 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVENP_0187 PF02542 YgbB family AVENP_0190 PF01964 Radical SAM ThiC family AVENP_0191 PF01883 Iron-sulfur cluster assembly protein AVENP_0191 PF10609 NUBPL iron-transfer P-loop NTPase AVENP_0192 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVENP_0192 PF01502 Phosphoribosyl-AMP cyclohydrolase AVENP_0196 PF00925 GTP cyclohydrolase II AVENP_0197 PF09940 Domain of unknown function (DUF2172) AVENP_0197 PF16254 Domain of unknown function (DUF4910) AVENP_0197 PF16221 winged helix-turn-helix AVENP_0201 PF02574 Homocysteine S-methyltransferase AVENP_0201 PF00809 Pterin binding enzyme AVENP_0201 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVENP_0201 PF02607 B12 binding domain AVENP_0201 PF02310 B12 binding domain AVENP_0202 PF00892 EamA-like transporter family AVENP_0204 PF09997 Predicted membrane protein (DUF2238) AVENP_0205 PF00465 Iron-containing alcohol dehydrogenase AVENP_0206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0206 PF08447 PAS fold AVENP_0206 PF08448 PAS fold AVENP_0210 PF02664 S-Ribosylhomocysteinase (LuxS) AVENP_0211 PF00072 Response regulator receiver domain AVENP_0211 PF04397 LytTr DNA-binding domain AVENP_0212 PF00857 Isochorismatase family AVENP_0217 PF00005 ABC transporter AVENP_0218 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVENP_0219 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0219 PF08447 PAS fold AVENP_0220 PF02203 Tar ligand binding domain homologue AVENP_0220 PF00672 HAMP domain AVENP_0220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0223 PF02405 Permease MlaE AVENP_0224 PF00005 ABC transporter AVENP_0224 PF09383 NIL domain AVENP_0227 PF05145 Transition state regulatory protein AbrB AVENP_0228 PF00484 Carbonic anhydrase AVENP_0229 PF08447 PAS fold AVENP_0229 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0229 PF08448 PAS fold AVENP_0230 PF00072 Response regulator receiver domain AVENP_0230 PF00486 Transcriptional regulatory protein, C terminal AVENP_0230 PF01627 Hpt domain AVENP_0231 PF01970 Tripartite tricarboxylate transporter TctA family AVENP_0234 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVENP_0237 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AVENP_0238 PF13419 Haloacid dehalogenase-like hydrolase AVENP_0239 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVENP_0240 PF00380 Ribosomal protein S9/S16 AVENP_0241 PF00572 Ribosomal protein L13 AVENP_0242 PF13493 Domain of unknown function (DUF4118) AVENP_0242 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0242 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0242 PF02702 Osmosensitive K+ channel His kinase sensor domain AVENP_0243 PF00072 Response regulator receiver domain AVENP_0243 PF00486 Transcriptional regulatory protein, C terminal AVENP_0245 PF01895 PhoU domain AVENP_0246 PF00005 ABC transporter AVENP_0247 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0248 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0249 PF12792 CSS motif domain associated with EAL AVENP_0249 PF00563 EAL domain AVENP_0250 PF12849 PBP superfamily domain AVENP_0252 PF03462 PCRF domain AVENP_0252 PF00472 RF-1 domain AVENP_0253 PF01649 Ribosomal protein S20 AVENP_0254 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVENP_0254 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVENP_0254 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVENP_0254 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVENP_0255 PF01252 Signal peptidase (SPase) II AVENP_0256 PF00330 Aconitase family (aconitate hydratase) AVENP_0257 PF12804 MobA-like NTP transferase domain AVENP_0258 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_0260 PF00453 Ribosomal protein L20 AVENP_0261 PF01632 Ribosomal protein L35 AVENP_0262 PF00707 Translation initiation factor IF-3, C-terminal domain AVENP_0262 PF05198 Translation initiation factor IF-3, N-terminal domain AVENP_0263 PF03129 Anticodon binding domain AVENP_0263 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVENP_0263 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVENP_0270 PF13288 DXP reductoisomerase C-terminal domain AVENP_0270 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVENP_0270 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVENP_0274 PF00814 Glycoprotease family AVENP_0275 PF01253 Translation initiation factor SUI1 AVENP_0276 PF03853 YjeF-related protein N-terminus AVENP_0276 PF01256 Carbohydrate kinase AVENP_0277 PF03091 CutA1 divalent ion tolerance protein AVENP_0278 PF05690 Thiazole biosynthesis protein ThiG AVENP_0281 PF12833 Helix-turn-helix domain AVENP_0290 PF01654 Cytochrome bd terminal oxidase subunit I AVENP_0292 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AVENP_0293 PF00364 Biotin-requiring enzyme AVENP_0295 PF12833 Helix-turn-helix domain AVENP_0296 PF01699 Sodium/calcium exchanger protein AVENP_0297 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVENP_0301 PF08448 PAS fold AVENP_0301 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0301 PF08447 PAS fold AVENP_0302 PF00072 Response regulator receiver domain AVENP_0302 PF00486 Transcriptional regulatory protein, C terminal AVENP_0304 PF03412 Peptidase C39 family AVENP_0304 PF00005 ABC transporter AVENP_0304 PF00664 ABC transporter transmembrane region AVENP_0305 PF13533 Biotin-lipoyl like AVENP_0307 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0307 PF00989 PAS fold AVENP_0307 PF00672 HAMP domain AVENP_0307 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0308 PF00456 Transketolase, thiamine diphosphate binding domain AVENP_0308 PF02780 Transketolase, C-terminal domain AVENP_0308 PF02779 Transketolase, pyrimidine binding domain AVENP_0310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVENP_0310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVENP_0311 PF00593 TonB dependent receptor AVENP_0311 PF07715 TonB-dependent Receptor Plug Domain AVENP_0314 PF03788 LrgA family AVENP_0315 PF04172 LrgB-like family AVENP_0316 PF01022 Bacterial regulatory protein, arsR family AVENP_0318 PF02040 Arsenical pump membrane protein AVENP_0319 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVENP_0320 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVENP_0322 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AVENP_0326 PF00375 Sodium:dicarboxylate symporter family AVENP_0327 PF01740 STAS domain AVENP_0327 PF00916 Sulfate permease family AVENP_0329 PF01553 Acyltransferase AVENP_0329 PF00501 AMP-binding enzyme AVENP_0330 PF08335 GlnD PII-uridylyltransferase AVENP_0330 PF01966 HD domain AVENP_0330 PF03445 Putative nucleotidyltransferase DUF294 AVENP_0332 PF08448 PAS fold AVENP_0332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0332 PF08447 PAS fold AVENP_0335 PF00909 Ammonium Transporter Family AVENP_0336 PF00543 Nitrogen regulatory protein P-II AVENP_0337 PF00909 Ammonium Transporter Family AVENP_0338 PF00543 Nitrogen regulatory protein P-II AVENP_0340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVENP_0340 PF02154 Flagellar motor switch protein FliM AVENP_0341 PF02119 Flagellar P-ring protein AVENP_0343 PF01313 Bacterial export proteins, family 3 AVENP_0348 PF02107 Flagellar L-ring protein AVENP_0350 PF02465 Flagellar hook-associated protein 2 N-terminus AVENP_0350 PF07195 Flagellar hook-associated protein 2 C-terminus AVENP_0350 PF07196 Flagellin hook IN motif AVENP_0351 PF02561 Flagellar protein FliS AVENP_0352 PF01171 PP-loop family AVENP_0353 PF04055 Radical SAM superfamily AVENP_0353 PF18693 TRAM domain AVENP_0353 PF00919 Uncharacterized protein family UPF0004 AVENP_0354 PF02569 Pantoate-beta-alanine ligase AVENP_0355 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0357 PF01648 4'-phosphopantetheinyl transferase superfamily AVENP_0358 PF03652 Holliday junction resolvase AVENP_0361 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVENP_0362 PF01474 Class-II DAHP synthetase family AVENP_0363 PF03502 Nucleoside-specific channel-forming protein, Tsx AVENP_0364 PF03960 ArsC family AVENP_0365 PF02686 Glu-tRNAGln amidotransferase C subunit AVENP_0366 PF01702 Queuine tRNA-ribosyltransferase AVENP_0368 PF00155 Aminotransferase class I and II AVENP_0370 PF08245 Mur ligase middle domain AVENP_0370 PF02875 Mur ligase family, glutamate ligase domain AVENP_0370 PF01225 Mur ligase family, catalytic domain AVENP_0372 PF04748 Divergent polysaccharide deacetylase AVENP_0373 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVENP_0373 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVENP_0374 PF00773 RNB domain AVENP_0376 PF01250 Ribosomal protein S6 AVENP_0377 PF00436 Single-strand binding protein family AVENP_0378 PF01084 Ribosomal protein S18 AVENP_0379 PF09190 DALR domain AVENP_0379 PF01406 tRNA synthetases class I (C) catalytic domain AVENP_0380 PF08529 NusA N-terminal domain AVENP_0380 PF13184 NusA-like KH domain AVENP_0382 PF04055 Radical SAM superfamily AVENP_0382 PF01938 TRAM domain AVENP_0382 PF00919 Uncharacterized protein family UPF0004 AVENP_0383 PF04028 Domain of unknown function (DUF374) AVENP_0385 PF04055 Radical SAM superfamily AVENP_0387 PF00484 Carbonic anhydrase AVENP_0388 PF00155 Aminotransferase class I and II AVENP_0389 PF02021 Uncharacterised protein family UPF0102 AVENP_0392 PF00691 OmpA family AVENP_0393 PF00391 PEP-utilising enzyme, mobile domain AVENP_0393 PF00224 Pyruvate kinase, barrel domain AVENP_0393 PF02887 Pyruvate kinase, alpha/beta domain AVENP_0396 PF00202 Aminotransferase class-III AVENP_0398 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVENP_0398 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVENP_0399 PF00425 chorismate binding enzyme AVENP_0400 PF01063 Amino-transferase class IV AVENP_0403 PF03591 AzlC protein AVENP_0404 PF05437 Branched-chain amino acid transport protein (AzlD) AVENP_0405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVENP_0405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVENP_0406 PF02504 Fatty acid synthesis protein AVENP_0407 PF01783 Ribosomal L32p protein family AVENP_0409 PF00334 Nucleoside diphosphate kinase AVENP_0410 PF00037 4Fe-4S binding domain AVENP_0411 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVENP_0411 PF00578 AhpC/TSA family AVENP_0412 PF07498 Rho termination factor, N-terminal domain AVENP_0412 PF07497 Rho termination factor, RNA-binding domain AVENP_0412 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVENP_0413 PF00005 ABC transporter AVENP_0413 PF09383 NIL domain AVENP_0414 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0415 PF03180 NLPA lipoprotein AVENP_0416 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVENP_0416 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVENP_0417 PF01177 Asp/Glu/Hydantoin racemase AVENP_0418 PF12170 DNA polymerase III tau subunit V interacting with alpha AVENP_0418 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AVENP_0418 PF12169 DNA polymerase III subunits gamma and tau domain III AVENP_0420 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVENP_0420 PF03900 Porphobilinogen deaminase, C-terminal domain AVENP_0422 PF00990 Diguanylate cyclase, GGDEF domain AVENP_0422 PF00072 Response regulator receiver domain AVENP_0423 PF04303 PrpF protein AVENP_0424 PF00694 Aconitase C-terminal domain AVENP_0424 PF00330 Aconitase family (aconitate hydratase) AVENP_0425 PF00285 Citrate synthase, C-terminal domain AVENP_0433 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVENP_0433 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVENP_0434 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVENP_0435 PF01758 Sodium Bile acid symporter family AVENP_0436 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVENP_0436 PF00005 ABC transporter AVENP_0437 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0437 PF12911 N-terminal TM domain of oligopeptide transport permease C AVENP_0438 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0439 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVENP_0442 PF16124 RecQ zinc-binding AVENP_0442 PF00570 HRDC domain AVENP_0442 PF00271 Helicase conserved C-terminal domain AVENP_0442 PF00270 DEAD/DEAH box helicase AVENP_0442 PF09382 RQC domain AVENP_0444 PF01022 Bacterial regulatory protein, arsR family AVENP_0445 PF00403 Heavy-metal-associated domain AVENP_0448 PF01863 Protein of unknown function DUF45 AVENP_0449 PF16226 Domain of unknown function (DUF4885) AVENP_0450 PF16226 Domain of unknown function (DUF4885) AVENP_0453 PF00350 Dynamin family AVENP_0454 PF00350 Dynamin family AVENP_0455 PF13085 2Fe-2S iron-sulfur cluster binding domain AVENP_0455 PF13183 4Fe-4S dicluster domain AVENP_0456 PF02910 Fumarate reductase flavoprotein C-term AVENP_0456 PF00890 FAD binding domain AVENP_0457 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVENP_0458 PF00361 Proton-conducting membrane transporter AVENP_0459 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVENP_0459 PF00361 Proton-conducting membrane transporter AVENP_0460 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVENP_0460 PF00361 Proton-conducting membrane transporter AVENP_0461 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVENP_0462 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVENP_0463 PF12838 4Fe-4S dicluster domain AVENP_0464 PF00146 NADH dehydrogenase AVENP_0465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVENP_0465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVENP_0465 PF00384 Molybdopterin oxidoreductase AVENP_0466 PF00285 Citrate synthase, C-terminal domain AVENP_0467 PF10531 SLBB domain AVENP_0467 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVENP_0467 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVENP_0469 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVENP_0469 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVENP_0470 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVENP_0471 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVENP_0472 PF00155 Aminotransferase class I and II AVENP_0473 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVENP_0474 PF12821 Threonine/Serine exporter, ThrE AVENP_0474 PF06738 Putative threonine/serine exporter AVENP_0475 PF12821 Threonine/Serine exporter, ThrE AVENP_0475 PF06738 Putative threonine/serine exporter AVENP_0477 PF03309 Type III pantothenate kinase AVENP_0478 PF01634 ATP phosphoribosyltransferase AVENP_0481 PF00579 tRNA synthetases class I (W and Y) AVENP_0482 PF02659 Putative manganese efflux pump AVENP_0483 PF07690 Major Facilitator Superfamily AVENP_0485 PF00005 ABC transporter AVENP_0485 PF00664 ABC transporter transmembrane region AVENP_0486 PF00664 ABC transporter transmembrane region AVENP_0486 PF00005 ABC transporter AVENP_0486 PF08021 Siderophore-interacting FAD-binding domain AVENP_0486 PF04954 Siderophore-interacting protein AVENP_0487 PF00593 TonB dependent receptor AVENP_0487 PF07715 TonB-dependent Receptor Plug Domain AVENP_0490 PF16916 Dimerisation domain of Zinc Transporter AVENP_0490 PF01545 Cation efflux family AVENP_0492 PF02403 Seryl-tRNA synthetase N-terminal domain AVENP_0492 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVENP_0495 PF01810 LysE type translocator AVENP_0496 PF00672 HAMP domain AVENP_0496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0496 PF02203 Tar ligand binding domain homologue AVENP_0497 PF03313 Serine dehydratase alpha chain AVENP_0497 PF03315 Serine dehydratase beta chain AVENP_0498 PF01810 LysE type translocator AVENP_0499 PF00005 ABC transporter AVENP_0500 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0501 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0502 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVENP_0503 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0503 PF08447 PAS fold AVENP_0507 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AVENP_0508 PF00037 4Fe-4S binding domain AVENP_0508 PF12801 4Fe-4S binding domain AVENP_0509 PF12838 4Fe-4S dicluster domain AVENP_0509 PF12800 4Fe-4S binding domain AVENP_0510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVENP_0510 PF01568 Molydopterin dinucleotide binding domain AVENP_0510 PF00384 Molybdopterin oxidoreductase AVENP_0510 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVENP_0511 PF10414 Sirohaem synthase dimerisation region AVENP_0511 PF14824 Sirohaem biosynthesis protein central AVENP_0511 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVENP_0514 PF02885 Glycosyl transferase family, helical bundle domain AVENP_0514 PF00591 Glycosyl transferase family, a/b domain AVENP_0515 PF06463 Molybdenum Cofactor Synthesis C AVENP_0515 PF04055 Radical SAM superfamily AVENP_0516 PF00312 Ribosomal protein S15 AVENP_0519 PF13380 CoA binding domain AVENP_0520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0520 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0520 PF08521 Two-component sensor kinase N-terminal AVENP_0521 PF00072 Response regulator receiver domain AVENP_0521 PF00486 Transcriptional regulatory protein, C terminal AVENP_0522 PF00639 PPIC-type PPIASE domain AVENP_0523 PF01116 Fructose-bisphosphate aldolase class-II AVENP_0524 PF02789 Cytosol aminopeptidase family, N-terminal domain AVENP_0524 PF00883 Cytosol aminopeptidase family, catalytic domain AVENP_0528 PF00296 Luciferase-like monooxygenase AVENP_0535 PF12706 Beta-lactamase superfamily domain AVENP_0536 PF03070 TENA/THI-4/PQQC family AVENP_0537 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AVENP_0538 PF04055 Radical SAM superfamily AVENP_0538 PF13186 Iron-sulfur cluster-binding domain AVENP_0539 PF00005 ABC transporter AVENP_0539 PF08402 TOBE domain AVENP_0540 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0541 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_0542 PF13416 Bacterial extracellular solute-binding protein AVENP_0543 PF00486 Transcriptional regulatory protein, C terminal AVENP_0543 PF00072 Response regulator receiver domain AVENP_0544 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0544 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0544 PF09456 RcsC Alpha-Beta-Loop (ABL) AVENP_0544 PF00072 Response regulator receiver domain AVENP_0545 PF00171 Aldehyde dehydrogenase family AVENP_0547 PF00313 'Cold-shock' DNA-binding domain AVENP_0548 PF02472 Biopolymer transport protein ExbD/TolR AVENP_0549 PF01618 MotA/TolQ/ExbB proton channel family AVENP_0551 PF00989 PAS fold AVENP_0551 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0551 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0551 PF08447 PAS fold AVENP_0552 PF00563 EAL domain AVENP_0552 PF03707 Bacterial signalling protein N terminal repeat AVENP_0552 PF00990 Diguanylate cyclase, GGDEF domain AVENP_0553 PF01202 Shikimate kinase AVENP_0554 PF00815 Histidinol dehydrogenase AVENP_0556 PF00348 Polyprenyl synthetase AVENP_0557 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVENP_0557 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVENP_0557 PF01488 Shikimate / quinate 5-dehydrogenase AVENP_0558 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVENP_0558 PF04073 Aminoacyl-tRNA editing domain AVENP_0558 PF03129 Anticodon binding domain AVENP_0559 PF00924 Mechanosensitive ion channel AVENP_0559 PF05552 Conserved TM helix AVENP_0560 PF01966 HD domain AVENP_0560 PF01743 Poly A polymerase head domain AVENP_0560 PF12627 Probable RNA and SrmB- binding site of polymerase A AVENP_0564 PF02699 Preprotein translocase subunit AVENP_0565 PF02355 Protein export membrane protein AVENP_0566 PF07549 SecD/SecF GG Motif AVENP_0566 PF02355 Protein export membrane protein AVENP_0570 PF13603 Leucyl-tRNA synthetase, Domain 2 AVENP_0570 PF00133 tRNA synthetases class I (I, L, M and V) AVENP_0570 PF09334 tRNA synthetases class I (M) AVENP_0572 PF08245 Mur ligase middle domain AVENP_0574 PF02254 TrkA-N domain AVENP_0574 PF00999 Sodium/hydrogen exchanger family AVENP_0575 PF02472 Biopolymer transport protein ExbD/TolR AVENP_0576 PF01618 MotA/TolQ/ExbB proton channel family AVENP_0580 PF02687 FtsX-like permease family AVENP_0580 PF12704 MacB-like periplasmic core domain AVENP_0580 PF00005 ABC transporter AVENP_0581 PF02687 FtsX-like permease family AVENP_0581 PF00005 ABC transporter AVENP_0581 PF12704 MacB-like periplasmic core domain AVENP_0582 PF12796 Ankyrin repeats (3 copies) AVENP_0582 PF13606 Ankyrin repeat AVENP_0591 PF01475 Ferric uptake regulator family AVENP_0593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0593 PF07568 Histidine kinase AVENP_0593 PF12282 Signal transduction histidine kinase AVENP_0595 PF00593 TonB dependent receptor AVENP_0595 PF07715 TonB-dependent Receptor Plug Domain AVENP_0599 PF00206 Lyase AVENP_0599 PF10415 Fumarase C C-terminus AVENP_0601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0601 PF00989 PAS fold AVENP_0601 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0602 PF00486 Transcriptional regulatory protein, C terminal AVENP_0602 PF00072 Response regulator receiver domain AVENP_0603 PF00107 Zinc-binding dehydrogenase AVENP_0603 PF08240 Alcohol dehydrogenase GroES-like domain AVENP_0604 PF01638 HxlR-like helix-turn-helix AVENP_0605 PF02203 Tar ligand binding domain homologue AVENP_0605 PF00672 HAMP domain AVENP_0605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0608 PF00873 AcrB/AcrD/AcrF family AVENP_0610 PF07715 TonB-dependent Receptor Plug Domain AVENP_0610 PF00593 TonB dependent receptor AVENP_0611 PF00593 TonB dependent receptor AVENP_0611 PF07660 Secretin and TonB N terminus short domain AVENP_0611 PF07715 TonB-dependent Receptor Plug Domain AVENP_0615 PF00593 TonB dependent receptor AVENP_0615 PF07715 TonB-dependent Receptor Plug Domain AVENP_0616 PF13640 2OG-Fe(II) oxygenase superfamily AVENP_0616 PF18331 PKHD-type hydroxylase C-terminal domain AVENP_0617 PF01070 FMN-dependent dehydrogenase AVENP_0623 PF00925 GTP cyclohydrolase II AVENP_0625 PF01242 6-pyruvoyl tetrahydropterin synthase AVENP_0634 PF00149 Calcineurin-like phosphoesterase AVENP_0634 PF02872 5'-nucleotidase, C-terminal domain AVENP_0637 PF03824 High-affinity nickel-transport protein AVENP_0645 PF03461 TRCF domain AVENP_0645 PF02559 CarD-like/TRCF domain AVENP_0645 PF00271 Helicase conserved C-terminal domain AVENP_0645 PF17757 UvrB interaction domain AVENP_0645 PF00270 DEAD/DEAH box helicase AVENP_0649 PF00360 Phytochrome region AVENP_0649 PF00990 Diguanylate cyclase, GGDEF domain AVENP_0649 PF01590 GAF domain AVENP_0649 PF00563 EAL domain AVENP_0651 PF00072 Response regulator receiver domain AVENP_0651 PF00486 Transcriptional regulatory protein, C terminal AVENP_0654 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0654 PF00672 HAMP domain AVENP_0654 PF02743 Cache domain AVENP_0655 PF00158 Sigma-54 interaction domain AVENP_0655 PF02954 Bacterial regulatory protein, Fis family AVENP_0655 PF00072 Response regulator receiver domain AVENP_0657 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0657 PF00672 HAMP domain AVENP_0657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0658 PF13277 YmdB-like protein AVENP_0662 PF01209 ubiE/COQ5 methyltransferase family AVENP_0663 PF02601 Exonuclease VII, large subunit AVENP_0663 PF13742 OB-fold nucleic acid binding domain AVENP_0664 PF01584 CheW-like domain AVENP_0665 PF00072 Response regulator receiver domain AVENP_0665 PF00158 Sigma-54 interaction domain AVENP_0665 PF02954 Bacterial regulatory protein, Fis family AVENP_0666 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVENP_0668 PF02261 Aspartate decarboxylase AVENP_0669 PF02575 YbaB/EbfC DNA-binding family AVENP_0670 PF00348 Polyprenyl synthetase AVENP_0671 PF00166 Chaperonin 10 Kd subunit AVENP_0672 PF00118 TCP-1/cpn60 chaperonin family AVENP_0673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0673 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0673 PF18719 ArlS sensor domain AVENP_0674 PF00072 Response regulator receiver domain AVENP_0674 PF00486 Transcriptional regulatory protein, C terminal AVENP_0675 PF00149 Calcineurin-like phosphoesterase AVENP_0677 PF04264 YceI-like domain AVENP_0680 PF02687 FtsX-like permease family AVENP_0680 PF12704 MacB-like periplasmic core domain AVENP_0680 PF00005 ABC transporter AVENP_0682 PF00459 Inositol monophosphatase family AVENP_0683 PF01380 SIS domain AVENP_0686 PF00892 EamA-like transporter family AVENP_0687 PF02772 S-adenosylmethionine synthetase, central domain AVENP_0687 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVENP_0687 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVENP_0688 PF17848 Acetyl-coA carboxylase zinc finger domain AVENP_0688 PF01039 Carboxyl transferase domain AVENP_0689 PF02581 Thiamine monophosphate synthase AVENP_0690 PF02590 Predicted SPOUT methyltransferase AVENP_0692 PF01207 Dihydrouridine synthase (Dus) AVENP_0694 PF17862 AAA+ lid domain AVENP_0694 PF01434 Peptidase family M41 AVENP_0694 PF00004 ATPase family associated with various cellular activities (AAA) AVENP_0695 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0695 PF13188 PAS domain AVENP_0695 PF08448 PAS fold AVENP_0695 PF00072 Response regulator receiver domain AVENP_0695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0696 PF00072 Response regulator receiver domain AVENP_0696 PF13426 PAS domain AVENP_0696 PF08448 PAS fold AVENP_0696 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0696 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0697 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0697 PF08447 PAS fold AVENP_0697 PF08448 PAS fold AVENP_0698 PF00682 HMGL-like AVENP_0698 PF08502 LeuA allosteric (dimerisation) domain AVENP_0699 PF07885 Ion channel AVENP_0699 PF02254 TrkA-N domain AVENP_0704 PF01624 MutS domain I AVENP_0704 PF00488 MutS domain V AVENP_0704 PF05188 MutS domain II AVENP_0704 PF05192 MutS domain III AVENP_0704 PF05190 MutS family domain IV AVENP_0709 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit AVENP_0714 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit AVENP_0716 PF00005 ABC transporter AVENP_0716 PF00664 ABC transporter transmembrane region AVENP_0719 PF07694 5TMR of 5TMR-LYT AVENP_0719 PF00990 Diguanylate cyclase, GGDEF domain AVENP_0720 PF00977 Histidine biosynthesis protein AVENP_0721 PF01370 NAD dependent epimerase/dehydratase family AVENP_0721 PF08338 Domain of unknown function (DUF1731) AVENP_0722 PF00117 Glutamine amidotransferase class-I AVENP_0724 PF00672 HAMP domain AVENP_0724 PF02203 Tar ligand binding domain homologue AVENP_0724 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0728 PF00009 Elongation factor Tu GTP binding domain AVENP_0728 PF06421 GTP-binding protein LepA C-terminus AVENP_0728 PF00679 Elongation factor G C-terminus AVENP_0728 PF03144 Elongation factor Tu domain 2 AVENP_0729 PF00691 OmpA family AVENP_0730 PF05736 OprF membrane domain AVENP_0730 PF00691 OmpA family AVENP_0731 PF14572 Phosphoribosyl synthetase-associated domain AVENP_0731 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVENP_0736 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVENP_0737 PF01321 Creatinase/Prolidase N-terminal domain AVENP_0737 PF00557 Metallopeptidase family M24 AVENP_0738 PF01220 Dehydroquinase class II AVENP_0739 PF01979 Amidohydrolase family AVENP_0740 PF01343 Peptidase family S49 AVENP_0741 PF00871 Acetokinase family AVENP_0742 PF01515 Phosphate acetyl/butaryl transferase AVENP_0743 PF00871 Acetokinase family AVENP_0744 PF00871 Acetokinase family AVENP_0745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVENP_0745 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVENP_0745 PF11490 DNA polymerase III polC-type N-terminus II AVENP_0745 PF00929 Exonuclease AVENP_0745 PF14480 DNA polymerase III polC-type N-terminus I AVENP_0745 PF02811 PHP domain AVENP_0745 PF14579 Helix-hairpin-helix motif AVENP_0747 PF00474 Sodium:solute symporter family AVENP_0749 PF00474 Sodium:solute symporter family AVENP_0751 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVENP_0751 PF00929 Exonuclease AVENP_0751 PF01336 OB-fold nucleic acid binding domain AVENP_0751 PF11490 DNA polymerase III polC-type N-terminus II AVENP_0751 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVENP_0751 PF14579 Helix-hairpin-helix motif AVENP_0751 PF02811 PHP domain AVENP_0753 PF00474 Sodium:solute symporter family AVENP_0755 PF00486 Transcriptional regulatory protein, C terminal AVENP_0755 PF00072 Response regulator receiver domain AVENP_0756 PF00672 HAMP domain AVENP_0756 PF13426 PAS domain AVENP_0756 PF00512 His Kinase A (phospho-acceptor) domain AVENP_0756 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0765 PF00994 Probable molybdopterin binding domain AVENP_0765 PF02464 Competence-damaged protein AVENP_0765 PF18146 Damage-inducible protein CinA KH domain AVENP_0766 PF06039 Malate:quinone oxidoreductase (Mqo) AVENP_0767 PF08264 Anticodon-binding domain of tRNA AVENP_0767 PF00133 tRNA synthetases class I (I, L, M and V) AVENP_0771 PF02875 Mur ligase family, glutamate ligase domain AVENP_0771 PF08245 Mur ligase middle domain AVENP_0773 PF00318 Ribosomal protein S2 AVENP_0774 PF00889 Elongation factor TS AVENP_0775 PF00005 ABC transporter AVENP_0777 PF00625 Guanylate kinase AVENP_0778 PF08448 PAS fold AVENP_0778 PF00990 Diguanylate cyclase, GGDEF domain AVENP_0778 PF00563 EAL domain AVENP_0779 PF00403 Heavy-metal-associated domain AVENP_0782 PF00005 ABC transporter AVENP_0782 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVENP_0783 PF00762 Ferrochelatase AVENP_0786 PF01875 Memo-like protein AVENP_0787 PF02698 DUF218 domain AVENP_0788 PF00005 ABC transporter AVENP_0789 PF00950 ABC 3 transport family AVENP_0791 PF08534 Redoxin AVENP_0792 PF08238 Sel1 repeat AVENP_0792 PF13181 Tetratricopeptide repeat AVENP_0794 PF00174 Oxidoreductase molybdopterin binding domain AVENP_0795 PF01794 Ferric reductase like transmembrane component AVENP_0796 PF01966 HD domain AVENP_0797 PF13416 Bacterial extracellular solute-binding protein AVENP_0798 PF00909 Ammonium Transporter Family AVENP_0799 PF00543 Nitrogen regulatory protein P-II AVENP_0800 PF00580 UvrD/REP helicase N-terminal domain AVENP_0800 PF13361 UvrD-like helicase C-terminal domain AVENP_0801 PF02080 TrkA-C domain AVENP_0801 PF02254 TrkA-N domain AVENP_0801 PF00999 Sodium/hydrogen exchanger family AVENP_0802 PF00174 Oxidoreductase molybdopterin binding domain AVENP_0814 PF01965 DJ-1/PfpI family AVENP_0817 PF08264 Anticodon-binding domain of tRNA AVENP_0817 PF10458 Valyl tRNA synthetase tRNA binding arm AVENP_0817 PF00133 tRNA synthetases class I (I, L, M and V) AVENP_0820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVENP_0820 PF01411 tRNA synthetases class II (A) AVENP_0822 PF01554 MatE AVENP_0823 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVENP_0829 PF00873 AcrB/AcrD/AcrF family AVENP_0832 PF07690 Major Facilitator Superfamily AVENP_0833 PF01725 Ham1 family AVENP_0836 PF03807 NADP oxidoreductase coenzyme F420-dependent AVENP_0836 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVENP_0838 PF13525 Outer membrane lipoprotein AVENP_0839 PF00004 ATPase family associated with various cellular activities (AAA) AVENP_0839 PF05362 Lon protease (S16) C-terminal proteolytic domain AVENP_0839 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVENP_0843 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVENP_0847 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVENP_0848 PF17932 Tetracyclin repressor-like, C-terminal domain AVENP_0848 PF00440 Bacterial regulatory proteins, tetR family AVENP_0850 PF00529 HlyD membrane-fusion protein of T1SS AVENP_0850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVENP_0851 PF00873 AcrB/AcrD/AcrF family AVENP_0853 PF00892 EamA-like transporter family AVENP_0857 PF02785 Biotin carboxylase C-terminal domain AVENP_0857 PF00289 Biotin carboxylase, N-terminal domain AVENP_0857 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVENP_0859 PF13784 Fic/DOC family N-terminal AVENP_0859 PF02661 Fic/DOC family AVENP_0862 PF02657 Fe-S metabolism associated domain AVENP_0863 PF00266 Aminotransferase class-V AVENP_0865 PF00005 ABC transporter AVENP_0866 PF01458 Uncharacterized protein family (UPF0051) AVENP_0867 PF00266 Aminotransferase class-V AVENP_0868 PF04324 BFD-like [2Fe-2S] binding domain AVENP_0868 PF01106 NifU-like domain AVENP_0868 PF01592 NifU-like N terminal domain AVENP_0869 PF01810 LysE type translocator AVENP_0871 PF00571 CBS domain AVENP_0871 PF01769 Divalent cation transporter AVENP_0871 PF03448 MgtE intracellular N domain AVENP_0872 PF14698 Argininosuccinate lyase C-terminal AVENP_0872 PF00206 Lyase AVENP_0873 PF01584 CheW-like domain AVENP_0873 PF00072 Response regulator receiver domain AVENP_0874 PF00899 ThiF family AVENP_0875 PF03449 Transcription elongation factor, N-terminal AVENP_0875 PF01272 Transcription elongation factor, GreA/GreB, C-term AVENP_0876 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVENP_0876 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVENP_0879 PF12344 Ultra-violet resistance protein B AVENP_0879 PF04851 Type III restriction enzyme, res subunit AVENP_0879 PF00271 Helicase conserved C-terminal domain AVENP_0879 PF17757 UvrB interaction domain AVENP_0879 PF02151 UvrB/uvrC motif AVENP_0883 PF10576 Iron-sulfur binding domain of endonuclease III AVENP_0883 PF00633 Helix-hairpin-helix motif AVENP_0883 PF00730 HhH-GPD superfamily base excision DNA repair protein AVENP_0885 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVENP_0885 PF01266 FAD dependent oxidoreductase AVENP_0891 PF02502 Ribose/Galactose Isomerase AVENP_0892 PF10502 Signal peptidase, peptidase S26 AVENP_0893 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVENP_0893 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVENP_0894 PF01386 Ribosomal L25p family AVENP_0894 PF14693 Ribosomal protein TL5, C-terminal domain AVENP_0895 PF01195 Peptidyl-tRNA hydrolase AVENP_0898 PF01520 N-acetylmuramoyl-L-alanine amidase AVENP_0900 PF01479 S4 domain AVENP_0900 PF00579 tRNA synthetases class I (W and Y) AVENP_0901 PF02824 TGS domain AVENP_0901 PF04607 Region found in RelA / SpoT proteins AVENP_0901 PF13291 ACT domain AVENP_0902 PF01192 RNA polymerase Rpb6 AVENP_0903 PF00696 Amino acid kinase family AVENP_0905 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVENP_0906 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVENP_0907 PF04715 Anthranilate synthase component I, N terminal region AVENP_0907 PF00425 chorismate binding enzyme AVENP_0909 PF00464 Serine hydroxymethyltransferase AVENP_0910 PF00152 tRNA synthetases class II (D, K and N) AVENP_0910 PF01336 OB-fold nucleic acid binding domain AVENP_0912 PF08448 PAS fold AVENP_0912 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_0912 PF08447 PAS fold AVENP_0913 PF04551 GcpE protein AVENP_0914 PF00772 DnaB-like helicase N terminal domain AVENP_0914 PF03796 DnaB-like helicase C terminal domain AVENP_0916 PF16363 GDP-mannose 4,6 dehydratase AVENP_0917 PF01370 NAD dependent epimerase/dehydratase family AVENP_0918 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVENP_0918 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVENP_0918 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVENP_0919 PF00483 Nucleotidyl transferase AVENP_0920 PF16363 GDP-mannose 4,6 dehydratase AVENP_0921 PF02350 UDP-N-acetylglucosamine 2-epimerase AVENP_0922 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVENP_0922 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVENP_0922 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVENP_0924 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVENP_0929 PF00535 Glycosyl transferase family 2 AVENP_0936 PF00117 Glutamine amidotransferase class-I AVENP_0937 PF00977 Histidine biosynthesis protein AVENP_0938 PF01757 Acyltransferase family AVENP_0939 PF08240 Alcohol dehydrogenase GroES-like domain AVENP_0939 PF00107 Zinc-binding dehydrogenase AVENP_0940 PF07940 Heparinase II/III-like protein AVENP_0940 PF16889 Heparinase II/III N-terminus AVENP_0942 PF01370 NAD dependent epimerase/dehydratase family AVENP_0943 PF00953 Glycosyl transferase family 4 AVENP_0944 PF02719 Polysaccharide biosynthesis protein AVENP_0946 PF14743 DNA ligase OB-like domain AVENP_0946 PF01068 ATP dependent DNA ligase domain AVENP_0947 PF00156 Phosphoribosyl transferase domain AVENP_0948 PF00291 Pyridoxal-phosphate dependent enzyme AVENP_0950 PF02789 Cytosol aminopeptidase family, N-terminal domain AVENP_0950 PF00883 Cytosol aminopeptidase family, catalytic domain AVENP_0951 PF00990 Diguanylate cyclase, GGDEF domain AVENP_0951 PF00072 Response regulator receiver domain AVENP_0952 PF00465 Iron-containing alcohol dehydrogenase AVENP_0953 PF00248 Aldo/keto reductase family AVENP_0955 PF03848 Tellurite resistance protein TehB AVENP_0956 PF12833 Helix-turn-helix domain AVENP_0956 PF06719 AraC-type transcriptional regulator N-terminus AVENP_0957 PF00440 Bacterial regulatory proteins, tetR family AVENP_0957 PF16925 Tetracyclin repressor-like, C-terminal domain AVENP_0959 PF00106 short chain dehydrogenase AVENP_0961 PF00873 AcrB/AcrD/AcrF family AVENP_0968 PF01926 50S ribosome-binding GTPase AVENP_0968 PF06071 Protein of unknown function (DUF933) AVENP_0972 PF06865 Pyrimidine/purine nucleoside phosphorylase AVENP_0974 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVENP_0976 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVENP_0976 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVENP_0978 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVENP_0978 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVENP_0979 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0979 PF08447 PAS fold AVENP_0980 PF00672 HAMP domain AVENP_0980 PF02203 Tar ligand binding domain homologue AVENP_0980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_0981 PF00155 Aminotransferase class I and II AVENP_0986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVENP_0986 PF03466 LysR substrate binding domain AVENP_0987 PF00330 Aconitase family (aconitate hydratase) AVENP_0988 PF00694 Aconitase C-terminal domain AVENP_0989 PF00561 alpha/beta hydrolase fold AVENP_0990 PF00589 Phage integrase family AVENP_0990 PF02899 Phage integrase, N-terminal SAM-like domain AVENP_0994 PF02151 UvrB/uvrC motif AVENP_0994 PF08459 UvrC Helix-hairpin-helix N-terminal AVENP_0994 PF01541 GIY-YIG catalytic domain AVENP_1024 PF00586 AIR synthase related protein, N-terminal domain AVENP_1024 PF02769 AIR synthase related protein, C-terminal domain AVENP_1025 PF01142 tRNA pseudouridine synthase D (TruD) AVENP_1027 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1027 PF02743 Cache domain AVENP_1027 PF00672 HAMP domain AVENP_1028 PF07499 RuvA, C-terminal domain AVENP_1028 PF01330 RuvA N terminal domain AVENP_1029 PF07478 D-ala D-ala ligase C-terminus AVENP_1029 PF01820 D-ala D-ala ligase N-terminus AVENP_1031 PF08245 Mur ligase middle domain AVENP_1031 PF02875 Mur ligase family, glutamate ligase domain AVENP_1032 PF01230 HIT domain AVENP_1034 PF00672 HAMP domain AVENP_1034 PF02203 Tar ligand binding domain homologue AVENP_1034 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1035 PF02203 Tar ligand binding domain homologue AVENP_1035 PF00672 HAMP domain AVENP_1035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1036 PF01266 FAD dependent oxidoreductase AVENP_1037 PF00338 Ribosomal protein S10p/S20e AVENP_1038 PF00297 Ribosomal protein L3 AVENP_1039 PF00573 Ribosomal protein L4/L1 family AVENP_1040 PF00276 Ribosomal protein L23 AVENP_1041 PF00181 Ribosomal Proteins L2, RNA binding domain AVENP_1041 PF03947 Ribosomal Proteins L2, C-terminal domain AVENP_1042 PF00203 Ribosomal protein S19 AVENP_1043 PF00237 Ribosomal protein L22p/L17e AVENP_1044 PF00189 Ribosomal protein S3, C-terminal domain AVENP_1044 PF07650 KH domain AVENP_1045 PF00252 Ribosomal protein L16p/L10e AVENP_1046 PF00831 Ribosomal L29 protein AVENP_1047 PF00366 Ribosomal protein S17 AVENP_1048 PF00238 Ribosomal protein L14p/L23e AVENP_1049 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVENP_1049 PF00467 KOW motif AVENP_1050 PF00673 ribosomal L5P family C-terminus AVENP_1050 PF00281 Ribosomal protein L5 AVENP_1051 PF00253 Ribosomal protein S14p/S29e AVENP_1052 PF00410 Ribosomal protein S8 AVENP_1053 PF00347 Ribosomal protein L6 AVENP_1054 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVENP_1055 PF03719 Ribosomal protein S5, C-terminal domain AVENP_1055 PF00333 Ribosomal protein S5, N-terminal domain AVENP_1056 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVENP_1057 PF00344 SecY translocase AVENP_1058 PF00557 Metallopeptidase family M24 AVENP_1059 PF01176 Translation initiation factor 1A / IF-1 AVENP_1061 PF03167 Uracil DNA glycosylase superfamily AVENP_1063 PF01336 OB-fold nucleic acid binding domain AVENP_1063 PF02938 GAD domain AVENP_1063 PF00152 tRNA synthetases class II (D, K and N) AVENP_1066 PF08497 Radical SAM N-terminal AVENP_1066 PF04055 Radical SAM superfamily AVENP_1067 PF01810 LysE type translocator AVENP_1068 PF05191 Adenylate kinase, active site lid AVENP_1072 PF00842 Alanine racemase, C-terminal domain AVENP_1072 PF01168 Alanine racemase, N-terminal domain AVENP_1073 PF01541 GIY-YIG catalytic domain AVENP_1073 PF08459 UvrC Helix-hairpin-helix N-terminal AVENP_1073 PF02151 UvrB/uvrC motif AVENP_1076 PF04973 Nicotinamide mononucleotide transporter AVENP_1077 PF00255 Glutathione peroxidase AVENP_1078 PF02203 Tar ligand binding domain homologue AVENP_1078 PF00672 HAMP domain AVENP_1078 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1079 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1079 PF02203 Tar ligand binding domain homologue AVENP_1079 PF00672 HAMP domain AVENP_1083 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVENP_1083 PF00691 OmpA family AVENP_1084 PF01618 MotA/TolQ/ExbB proton channel family AVENP_1085 PF00072 Response regulator receiver domain AVENP_1085 PF00486 Transcriptional regulatory protein, C terminal AVENP_1086 PF00072 Response regulator receiver domain AVENP_1086 PF00486 Transcriptional regulatory protein, C terminal AVENP_1087 PF00072 Response regulator receiver domain AVENP_1087 PF09308 LuxQ, periplasmic AVENP_1087 PF00512 His Kinase A (phospho-acceptor) domain AVENP_1087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1088 PF12849 PBP superfamily domain AVENP_1089 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_1090 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_1091 PF00005 ABC transporter AVENP_1096 PF00293 NUDIX domain AVENP_1096 PF13344 Haloacid dehalogenase-like hydrolase AVENP_1097 PF07715 TonB-dependent Receptor Plug Domain AVENP_1097 PF00593 TonB dependent receptor AVENP_1101 PF02653 Branched-chain amino acid transport system / permease component AVENP_1103 PF00005 ABC transporter AVENP_1104 PF00005 ABC transporter AVENP_1108 PF01774 UreD urease accessory protein AVENP_1109 PF00860 Permease family AVENP_1110 PF00005 ABC transporter AVENP_1111 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_1112 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_1116 PF03561 Allantoicase repeat AVENP_1117 PF04115 Ureidoglycolate lyase AVENP_1118 PF00699 Urease beta subunit AVENP_1118 PF00547 Urease, gamma subunit AVENP_1119 PF01979 Amidohydrolase family AVENP_1119 PF00449 Urease alpha-subunit, N-terminal domain AVENP_1120 PF05194 UreE urease accessory protein, C-terminal domain AVENP_1122 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVENP_1123 PF00072 Response regulator receiver domain AVENP_1128 PF00672 HAMP domain AVENP_1128 PF02203 Tar ligand binding domain homologue AVENP_1128 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1130 PF08359 YsiA-like protein, C-terminal region AVENP_1130 PF00440 Bacterial regulatory proteins, tetR family AVENP_1133 PF00873 AcrB/AcrD/AcrF family AVENP_1136 PF01434 Peptidase family M41 AVENP_1136 PF00004 ATPase family associated with various cellular activities (AAA) AVENP_1136 PF06480 FtsH Extracellular AVENP_1136 PF17862 AAA+ lid domain AVENP_1137 PF00072 Response regulator receiver domain AVENP_1138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1138 PF00512 His Kinase A (phospho-acceptor) domain AVENP_1143 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVENP_1143 PF00384 Molybdopterin oxidoreductase AVENP_1143 PF01568 Molydopterin dinucleotide binding domain AVENP_1144 PF13247 4Fe-4S dicluster domain AVENP_1146 PF02634 FdhD/NarQ family AVENP_1150 PF11799 impB/mucB/samB family C-terminal domain AVENP_1150 PF00817 impB/mucB/samB family AVENP_1151 PF04717 Type VI secretion system, phage-baseplate injector AVENP_1151 PF16671 Actin cross-linking domain AVENP_1153 PF00182 Chitinase class I AVENP_1156 PF01042 Endoribonuclease L-PSP AVENP_1157 PF01266 FAD dependent oxidoreductase AVENP_1158 PF01235 Sodium:alanine symporter family AVENP_1159 PF00842 Alanine racemase, C-terminal domain AVENP_1159 PF01168 Alanine racemase, N-terminal domain AVENP_1160 PF07836 DmpG-like communication domain AVENP_1160 PF00682 HMGL-like AVENP_1161 PF00075 RNase H AVENP_1162 PF02203 Tar ligand binding domain homologue AVENP_1162 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1162 PF00672 HAMP domain AVENP_1168 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1168 PF08447 PAS fold AVENP_1168 PF13426 PAS domain AVENP_1169 PF11849 Domain of unknown function (DUF3369) AVENP_1170 PF08448 PAS fold AVENP_1170 PF08447 PAS fold AVENP_1170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1171 PF00158 Sigma-54 interaction domain AVENP_1171 PF00072 Response regulator receiver domain AVENP_1171 PF02954 Bacterial regulatory protein, Fis family AVENP_1172 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AVENP_1172 PF18381 YcaO cyclodehydratase C-terminal domain AVENP_1176 PF00271 Helicase conserved C-terminal domain AVENP_1176 PF00270 DEAD/DEAH box helicase AVENP_1177 PF00905 Penicillin binding protein transpeptidase domain AVENP_1178 PF00158 Sigma-54 interaction domain AVENP_1178 PF00072 Response regulator receiver domain AVENP_1178 PF02954 Bacterial regulatory protein, Fis family AVENP_1180 PF01263 Aldose 1-epimerase AVENP_1181 PF03475 3-alpha domain AVENP_1181 PF03473 MOSC domain AVENP_1182 PF00202 Aminotransferase class-III AVENP_1183 PF00958 GMP synthase C terminal domain AVENP_1183 PF02540 NAD synthase AVENP_1183 PF00117 Glutamine amidotransferase class-I AVENP_1184 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVENP_1184 PF02805 Metal binding domain of Ada AVENP_1184 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVENP_1184 PF12833 Helix-turn-helix domain AVENP_1185 PF00464 Serine hydroxymethyltransferase AVENP_1187 PF00999 Sodium/hydrogen exchanger family AVENP_1187 PF02254 TrkA-N domain AVENP_1191 PF07690 Major Facilitator Superfamily AVENP_1192 PF02028 BCCT, betaine/carnitine/choline family transporter AVENP_1194 PF03737 Aldolase/RraA AVENP_1197 PF02600 Disulfide bond formation protein DsbB AVENP_1201 PF08534 Redoxin AVENP_1202 PF13419 Haloacid dehalogenase-like hydrolase AVENP_1203 PF03641 Possible lysine decarboxylase AVENP_1207 PF01709 Transcriptional regulator AVENP_1211 PF02770 Acyl-CoA dehydrogenase, middle domain AVENP_1211 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVENP_1211 PF09317 Domain of unknown function (DUF1974) AVENP_1211 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVENP_1212 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVENP_1212 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVENP_1212 PF00378 Enoyl-CoA hydratase/isomerase AVENP_1213 PF02803 Thiolase, C-terminal domain AVENP_1213 PF00108 Thiolase, N-terminal domain AVENP_1214 PF00501 AMP-binding enzyme AVENP_1217 PF01327 Polypeptide deformylase AVENP_1219 PF00330 Aconitase family (aconitate hydratase) AVENP_1219 PF06434 Aconitate hydratase 2 N-terminus AVENP_1219 PF11791 Aconitate B N-terminal domain AVENP_1220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVENP_1220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AVENP_1221 PF00375 Sodium:dicarboxylate symporter family AVENP_1222 PF00892 EamA-like transporter family AVENP_1223 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVENP_1223 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVENP_1226 PF01914 MarC family integral membrane protein AVENP_1228 PF01810 LysE type translocator AVENP_1229 PF08534 Redoxin AVENP_1229 PF01641 SelR domain AVENP_1229 PF01625 Peptide methionine sulfoxide reductase AVENP_1231 PF08448 PAS fold AVENP_1231 PF03705 CheR methyltransferase, all-alpha domain AVENP_1231 PF01739 CheR methyltransferase, SAM binding domain AVENP_1231 PF01339 CheB methylesterase AVENP_1233 PF00950 ABC 3 transport family AVENP_1234 PF00005 ABC transporter AVENP_1239 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVENP_1239 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_1239 PF00403 Heavy-metal-associated domain AVENP_1240 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1242 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AVENP_1242 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVENP_1243 PF00374 Nickel-dependent hydrogenase AVENP_1244 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVENP_1244 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVENP_1244 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AVENP_1245 PF00374 Nickel-dependent hydrogenase AVENP_1246 PF01292 Prokaryotic cytochrome b561 AVENP_1247 PF01750 Hydrogenase maturation protease AVENP_1254 PF00593 TonB dependent receptor AVENP_1254 PF07715 TonB-dependent Receptor Plug Domain AVENP_1255 PF12833 Helix-turn-helix domain AVENP_1255 PF02311 AraC-like ligand binding domain AVENP_1256 PF01750 Hydrogenase maturation protease AVENP_1258 PF01300 Telomere recombination AVENP_1258 PF07503 HypF finger AVENP_1258 PF00708 Acylphosphatase AVENP_1258 PF17788 HypF Kae1-like domain AVENP_1265 PF03471 Transporter associated domain AVENP_1265 PF00999 Sodium/hydrogen exchanger family AVENP_1265 PF02080 TrkA-C domain AVENP_1266 PF00085 Thioredoxin AVENP_1273 PF02926 THUMP domain AVENP_1273 PF02568 Thiamine biosynthesis protein (ThiI) AVENP_1277 PF13726 Na+-H+ antiporter family AVENP_1277 PF03553 Na+/H+ antiporter family AVENP_1280 PF00561 alpha/beta hydrolase fold AVENP_1282 PF02567 Phenazine biosynthesis-like protein AVENP_1284 PF12823 Domain of unknown function (DUF3817) AVENP_1287 PF05661 Protein of unknown function (DUF808) AVENP_1290 PF03707 Bacterial signalling protein N terminal repeat AVENP_1290 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1290 PF00563 EAL domain AVENP_1291 PF00672 HAMP domain AVENP_1291 PF02203 Tar ligand binding domain homologue AVENP_1291 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1293 PF01891 Cobalt uptake substrate-specific transmembrane region AVENP_1296 PF00005 ABC transporter AVENP_1299 PF02384 N-6 DNA Methylase AVENP_1301 PF06250 YhcG PDDEXK nuclease domain AVENP_1301 PF17761 DUF1016 N-terminal domain AVENP_1305 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVENP_1306 PF01455 HupF/HypC family AVENP_1307 PF01924 Hydrogenase formation hypA family AVENP_1308 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVENP_1308 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVENP_1310 PF07728 AAA domain (dynein-related subfamily) AVENP_1310 PF12102 Domain of unknown function (DUF3578) AVENP_1312 PF02769 AIR synthase related protein, C-terminal domain AVENP_1312 PF00586 AIR synthase related protein, N-terminal domain AVENP_1313 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AVENP_1315 PF02653 Branched-chain amino acid transport system / permease component AVENP_1316 PF02653 Branched-chain amino acid transport system / permease component AVENP_1316 PF11862 Domain of unknown function (DUF3382) AVENP_1317 PF00005 ABC transporter AVENP_1317 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVENP_1318 PF00005 ABC transporter AVENP_1319 PF08448 PAS fold AVENP_1319 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1324 PF18074 Primosomal protein N C-terminal domain AVENP_1324 PF00271 Helicase conserved C-terminal domain AVENP_1324 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVENP_1324 PF00270 DEAD/DEAH box helicase AVENP_1324 PF17764 3′ DNA-binding domain (3′BD) AVENP_1325 PF14602 Hexapeptide repeat of succinyl-transferase AVENP_1325 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AVENP_1326 PF00005 ABC transporter AVENP_1326 PF16326 ABC transporter C-terminal domain AVENP_1326 PF12848 ABC transporter AVENP_1328 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AVENP_1331 PF00005 ABC transporter AVENP_1332 PF02390 Putative methyltransferase AVENP_1334 PF01479 S4 domain AVENP_1334 PF00849 RNA pseudouridylate synthase AVENP_1335 PF01098 Cell cycle protein AVENP_1338 PF00202 Aminotransferase class-III AVENP_1339 PF06865 Pyrimidine/purine nucleoside phosphorylase AVENP_1343 PF00140 Sigma-70 factor, region 1.2 AVENP_1343 PF04542 Sigma-70 region 2 AVENP_1343 PF04539 Sigma-70 region 3 AVENP_1343 PF04545 Sigma-70, region 4 AVENP_1344 PF00694 Aconitase C-terminal domain AVENP_1345 PF00180 Isocitrate/isopropylmalate dehydrogenase AVENP_1348 PF00444 Ribosomal protein L36 AVENP_1349 PF00416 Ribosomal protein S13/S18 AVENP_1350 PF00411 Ribosomal protein S11 AVENP_1351 PF01479 S4 domain AVENP_1351 PF00163 Ribosomal protein S4/S9 N-terminal domain AVENP_1352 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVENP_1352 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVENP_1352 PF01000 RNA polymerase Rpb3/RpoA insert domain AVENP_1353 PF01196 Ribosomal protein L17 AVENP_1354 PF01425 Amidase AVENP_1355 PF00571 CBS domain AVENP_1355 PF00478 IMP dehydrogenase / GMP reductase domain AVENP_1357 PF01541 GIY-YIG catalytic domain AVENP_1359 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVENP_1360 PF00962 Adenosine/AMP deaminase AVENP_1361 PF02574 Homocysteine S-methyltransferase AVENP_1362 PF01810 LysE type translocator AVENP_1369 PF08443 RimK-like ATP-grasp domain AVENP_1369 PF08245 Mur ligase middle domain AVENP_1369 PF02875 Mur ligase family, glutamate ligase domain AVENP_1372 PF00512 His Kinase A (phospho-acceptor) domain AVENP_1372 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1373 PF02652 L-lactate permease AVENP_1375 PF01556 DnaJ C terminal domain AVENP_1375 PF00226 DnaJ domain AVENP_1375 PF00684 DnaJ central domain AVENP_1378 PF00933 Glycosyl hydrolase family 3 N terminal domain AVENP_1378 PF01915 Glycosyl hydrolase family 3 C-terminal domain AVENP_1379 PF01594 AI-2E family transporter AVENP_1380 PF00005 ABC transporter AVENP_1380 PF00664 ABC transporter transmembrane region AVENP_1384 PF00072 Response regulator receiver domain AVENP_1384 PF00486 Transcriptional regulatory protein, C terminal AVENP_1385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1388 PF00700 Bacterial flagellin C-terminal helical region AVENP_1388 PF00669 Bacterial flagellin N-terminal helical region AVENP_1388 PF07196 Flagellin hook IN motif AVENP_1394 PF13173 AAA domain AVENP_1394 PF13635 Domain of unknown function (DUF4143) AVENP_1396 PF07694 5TMR of 5TMR-LYT AVENP_1396 PF06580 Histidine kinase AVENP_1396 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1397 PF04397 LytTr DNA-binding domain AVENP_1397 PF00072 Response regulator receiver domain AVENP_1399 PF00762 Ferrochelatase AVENP_1400 PF00270 DEAD/DEAH box helicase AVENP_1400 PF00271 Helicase conserved C-terminal domain AVENP_1401 PF01761 3-dehydroquinate synthase AVENP_1403 PF00919 Uncharacterized protein family UPF0004 AVENP_1403 PF04055 Radical SAM superfamily AVENP_1404 PF00004 ATPase family associated with various cellular activities (AAA) AVENP_1404 PF01434 Peptidase family M41 AVENP_1404 PF17862 AAA+ lid domain AVENP_1406 PF00994 Probable molybdopterin binding domain AVENP_1407 PF00939 Sodium:sulfate symporter transmembrane region AVENP_1409 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1409 PF10442 FIST C domain AVENP_1409 PF00563 EAL domain AVENP_1409 PF08495 FIST N domain AVENP_1413 PF01593 Flavin containing amine oxidoreductase AVENP_1414 PF08212 Lipocalin-like domain AVENP_1416 PF00106 short chain dehydrogenase AVENP_1418 PF00005 ABC transporter AVENP_1418 PF12848 ABC transporter AVENP_1419 PF03061 Thioesterase superfamily AVENP_1420 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVENP_1421 PF00849 RNA pseudouridylate synthase AVENP_1421 PF01479 S4 domain AVENP_1422 PF13419 Haloacid dehalogenase-like hydrolase AVENP_1426 PF07715 TonB-dependent Receptor Plug Domain AVENP_1426 PF00593 TonB dependent receptor AVENP_1427 PF01497 Periplasmic binding protein AVENP_1428 PF00005 ABC transporter AVENP_1429 PF01032 FecCD transport family AVENP_1430 PF00300 Histidine phosphatase superfamily (branch 1) AVENP_1431 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVENP_1431 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVENP_1436 PF01713 Smr domain AVENP_1436 PF00488 MutS domain V AVENP_1440 PF01546 Peptidase family M20/M25/M40 AVENP_1440 PF07687 Peptidase dimerisation domain AVENP_1447 PF02416 mttA/Hcf106 family AVENP_1448 PF13411 MerR HTH family regulatory protein AVENP_1449 PF01556 DnaJ C terminal domain AVENP_1449 PF00226 DnaJ domain AVENP_1450 PF08447 PAS fold AVENP_1450 PF08448 PAS fold AVENP_1450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1452 PF00072 Response regulator receiver domain AVENP_1454 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVENP_1454 PF01266 FAD dependent oxidoreductase AVENP_1456 PF03734 L,D-transpeptidase catalytic domain AVENP_1456 PF01476 LysM domain AVENP_1456 PF17969 L,D-transpeptidase C-terminal domain AVENP_1458 PF00550 Phosphopantetheine attachment site AVENP_1461 PF03062 MBOAT, membrane-bound O-acyltransferase family AVENP_1462 PF00501 AMP-binding enzyme AVENP_1462 PF13193 AMP-binding enzyme C-terminal domain AVENP_1464 PF00216 Bacterial DNA-binding protein AVENP_1466 PF01795 MraW methylase family AVENP_1468 PF00873 AcrB/AcrD/AcrF family AVENP_1472 PF00501 AMP-binding enzyme AVENP_1472 PF13193 AMP-binding enzyme C-terminal domain AVENP_1472 PF00668 Condensation domain AVENP_1472 PF00550 Phosphopantetheine attachment site AVENP_1472 PF00975 Thioesterase domain AVENP_1473 PF13941 MutL protein AVENP_1474 PF06368 Methylaspartate mutase E chain (MutE) AVENP_1475 PF02310 B12 binding domain AVENP_1476 PF03971 Monomeric isocitrate dehydrogenase AVENP_1477 PF02618 YceG-like family AVENP_1479 PF02687 FtsX-like permease family AVENP_1479 PF12704 MacB-like periplasmic core domain AVENP_1480 PF07516 SecA Wing and Scaffold domain AVENP_1480 PF01043 SecA preprotein cross-linking domain AVENP_1480 PF07517 SecA DEAD-like domain AVENP_1480 PF02810 SEC-C motif AVENP_1480 PF00271 Helicase conserved C-terminal domain AVENP_1483 PF00589 Phage integrase family AVENP_1483 PF14659 Phage integrase, N-terminal SAM-like domain AVENP_1486 PF03958 Bacterial type II/III secretion system short domain AVENP_1486 PF00263 Bacterial type II and III secretion system protein AVENP_1502 PF01546 Peptidase family M20/M25/M40 AVENP_1502 PF07687 Peptidase dimerisation domain AVENP_1503 PF08448 PAS fold AVENP_1503 PF08447 PAS fold AVENP_1503 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1504 PF00072 Response regulator receiver domain AVENP_1504 PF00486 Transcriptional regulatory protein, C terminal AVENP_1504 PF01627 Hpt domain AVENP_1505 PF05140 ResB-like family AVENP_1505 PF01578 Cytochrome C assembly protein AVENP_1506 PF08003 Protein of unknown function (DUF1698) AVENP_1507 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1507 PF00360 Phytochrome region AVENP_1507 PF00563 EAL domain AVENP_1507 PF01590 GAF domain AVENP_1508 PF08447 PAS fold AVENP_1508 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1508 PF00563 EAL domain AVENP_1508 PF08448 PAS fold AVENP_1509 PF00753 Metallo-beta-lactamase superfamily AVENP_1513 PF00291 Pyridoxal-phosphate dependent enzyme AVENP_1514 PF08448 PAS fold AVENP_1514 PF08447 PAS fold AVENP_1514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1515 PF00684 DnaJ central domain AVENP_1515 PF00226 DnaJ domain AVENP_1515 PF01556 DnaJ C terminal domain AVENP_1516 PF02132 RecR protein AVENP_1516 PF13662 Toprim domain AVENP_1518 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1518 PF08447 PAS fold AVENP_1521 PF00486 Transcriptional regulatory protein, C terminal AVENP_1521 PF00072 Response regulator receiver domain AVENP_1522 PF00512 His Kinase A (phospho-acceptor) domain AVENP_1522 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1523 PF00512 His Kinase A (phospho-acceptor) domain AVENP_1523 PF02702 Osmosensitive K+ channel His kinase sensor domain AVENP_1523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1523 PF13493 Domain of unknown function (DUF4118) AVENP_1524 PF00486 Transcriptional regulatory protein, C terminal AVENP_1524 PF00072 Response regulator receiver domain AVENP_1525 PF02386 Cation transport protein AVENP_1526 PF02080 TrkA-C domain AVENP_1526 PF02254 TrkA-N domain AVENP_1527 PF00132 Bacterial transferase hexapeptide (six repeats) AVENP_1530 PF08443 RimK-like ATP-grasp domain AVENP_1530 PF18030 RimK PreATP-grasp domain AVENP_1531 PF01546 Peptidase family M20/M25/M40 AVENP_1531 PF07687 Peptidase dimerisation domain AVENP_1532 PF00764 Arginosuccinate synthase AVENP_1537 PF02885 Glycosyl transferase family, helical bundle domain AVENP_1537 PF00591 Glycosyl transferase family, a/b domain AVENP_1538 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AVENP_1539 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVENP_1539 PF00005 ABC transporter AVENP_1540 PF08448 PAS fold AVENP_1540 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1541 PF10442 FIST C domain AVENP_1541 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1541 PF08495 FIST N domain AVENP_1541 PF00563 EAL domain AVENP_1542 PF02348 Cytidylyltransferase AVENP_1543 PF00476 DNA polymerase family A AVENP_1543 PF01367 5'-3' exonuclease, C-terminal SAM fold AVENP_1543 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVENP_1547 PF01790 Prolipoprotein diacylglyceryl transferase AVENP_1550 PF03737 Aldolase/RraA AVENP_1556 PF00209 Sodium:neurotransmitter symporter family AVENP_1559 PF02547 Queuosine biosynthesis protein AVENP_1560 PF00902 Sec-independent protein translocase protein (TatC) AVENP_1562 PF05099 Tellurite resistance protein TerB AVENP_1562 PF00226 DnaJ domain AVENP_1566 PF02540 NAD synthase AVENP_1567 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVENP_1568 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVENP_1570 PF06969 HemN C-terminal domain AVENP_1570 PF04055 Radical SAM superfamily AVENP_1571 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVENP_1571 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVENP_1572 PF03477 ATP cone domain AVENP_1572 PF13597 Anaerobic ribonucleoside-triphosphate reductase AVENP_1575 PF00486 Transcriptional regulatory protein, C terminal AVENP_1575 PF00072 Response regulator receiver domain AVENP_1576 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1576 PF08447 PAS fold AVENP_1577 PF00490 Delta-aminolevulinic acid dehydratase AVENP_1578 PF00925 GTP cyclohydrolase II AVENP_1579 PF02527 rRNA small subunit methyltransferase G AVENP_1584 PF02092 Glycyl-tRNA synthetase beta subunit AVENP_1588 PF00925 GTP cyclohydrolase II AVENP_1588 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVENP_1590 PF01293 Phosphoenolpyruvate carboxykinase AVENP_1591 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AVENP_1592 PF00364 Biotin-requiring enzyme AVENP_1596 PF00133 tRNA synthetases class I (I, L, M and V) AVENP_1596 PF09334 tRNA synthetases class I (M) AVENP_1596 PF01588 Putative tRNA binding domain AVENP_1598 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AVENP_1604 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVENP_1605 PF05193 Peptidase M16 inactive domain AVENP_1606 PF04055 Radical SAM superfamily AVENP_1607 PF01103 Surface antigen AVENP_1607 PF07244 Surface antigen variable number repeat AVENP_1608 PF01842 ACT domain AVENP_1608 PF02153 Prephenate dehydrogenase AVENP_1609 PF00809 Pterin binding enzyme AVENP_1612 PF01842 ACT domain AVENP_1612 PF00696 Amino acid kinase family AVENP_1612 PF13840 ACT domain AVENP_1613 PF00293 NUDIX domain AVENP_1614 PF06969 HemN C-terminal domain AVENP_1614 PF04055 Radical SAM superfamily AVENP_1615 PF05175 Methyltransferase small domain AVENP_1615 PF17827 PrmC N-terminal domain AVENP_1616 PF01432 Peptidase family M3 AVENP_1620 PF00589 Phage integrase family AVENP_1620 PF18644 Phage integrase SAM-like domain AVENP_1631 PF00263 Bacterial type II and III secretion system protein AVENP_1631 PF03958 Bacterial type II/III secretion system short domain AVENP_1638 PF00072 Response regulator receiver domain AVENP_1638 PF01339 CheB methylesterase AVENP_1639 PF03975 CheD chemotactic sensory transduction AVENP_1640 PF01739 CheR methyltransferase, SAM binding domain AVENP_1640 PF03705 CheR methyltransferase, all-alpha domain AVENP_1641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1641 PF01584 CheW-like domain AVENP_1641 PF09078 CheY binding AVENP_1641 PF02895 Signal transducing histidine kinase, homodimeric domain AVENP_1641 PF01627 Hpt domain AVENP_1642 PF00072 Response regulator receiver domain AVENP_1643 PF00013 KH domain AVENP_1643 PF03725 3' exoribonuclease family, domain 2 AVENP_1643 PF01138 3' exoribonuclease family, domain 1 AVENP_1643 PF00575 S1 RNA binding domain AVENP_1643 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVENP_1645 PF03968 OstA-like protein AVENP_1645 PF04453 LPS transport system D AVENP_1647 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVENP_1647 PF02844 Phosphoribosylglycinamide synthetase, N domain AVENP_1647 PF02843 Phosphoribosylglycinamide synthetase, C domain AVENP_1649 PF01740 STAS domain AVENP_1649 PF00916 Sulfate permease family AVENP_1650 PF01926 50S ribosome-binding GTPase AVENP_1650 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVENP_1651 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVENP_1651 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AVENP_1653 PF07195 Flagellar hook-associated protein 2 C-terminus AVENP_1653 PF02465 Flagellar hook-associated protein 2 N-terminus AVENP_1653 PF07196 Flagellin hook IN motif AVENP_1654 PF00460 Flagella basal body rod protein AVENP_1654 PF07559 Flagellar basal body protein FlaE AVENP_1654 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVENP_1657 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVENP_1657 PF07559 Flagellar basal body protein FlaE AVENP_1657 PF07196 Flagellin hook IN motif AVENP_1657 PF00460 Flagella basal body rod protein AVENP_1660 PF00072 Response regulator receiver domain AVENP_1660 PF00486 Transcriptional regulatory protein, C terminal AVENP_1661 PF01580 FtsK/SpoIIIE family AVENP_1661 PF17854 FtsK alpha domain AVENP_1661 PF09397 Ftsk gamma domain AVENP_1662 PF00132 Bacterial transferase hexapeptide (six repeats) AVENP_1662 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVENP_1663 PF10369 Small subunit of acetolactate synthase AVENP_1664 PF00205 Thiamine pyrophosphate enzyme, central domain AVENP_1664 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVENP_1664 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVENP_1665 PF00563 EAL domain AVENP_1665 PF03707 Bacterial signalling protein N terminal repeat AVENP_1665 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1669 PF02472 Biopolymer transport protein ExbD/TolR AVENP_1670 PF01618 MotA/TolQ/ExbB proton channel family AVENP_1672 PF07715 TonB-dependent Receptor Plug Domain AVENP_1672 PF00593 TonB dependent receptor AVENP_1673 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1673 PF02203 Tar ligand binding domain homologue AVENP_1673 PF00672 HAMP domain AVENP_1682 PF12833 Helix-turn-helix domain AVENP_1682 PF17853 GGDEF-like domain AVENP_1685 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVENP_1685 PF00578 AhpC/TSA family AVENP_1688 PF02001 Protein of unknown function DUF134 AVENP_1690 PF01654 Cytochrome bd terminal oxidase subunit I AVENP_1694 PF01145 SPFH domain / Band 7 family AVENP_1694 PF16200 C-terminal region of band_7 AVENP_1695 PF05971 RNA methyltransferase AVENP_1697 PF00486 Transcriptional regulatory protein, C terminal AVENP_1697 PF00072 Response regulator receiver domain AVENP_1698 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1698 PF02203 Tar ligand binding domain homologue AVENP_1698 PF00672 HAMP domain AVENP_1701 PF00588 SpoU rRNA Methylase family AVENP_1702 PF01842 ACT domain AVENP_1702 PF00551 Formyl transferase AVENP_1703 PF01515 Phosphate acetyl/butaryl transferase AVENP_1703 PF03949 Malic enzyme, NAD binding domain AVENP_1703 PF00390 Malic enzyme, N-terminal domain AVENP_1704 PF00206 Lyase AVENP_1704 PF10415 Fumarase C C-terminus AVENP_1705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1705 PF00512 His Kinase A (phospho-acceptor) domain AVENP_1705 PF00989 PAS fold AVENP_1706 PF00486 Transcriptional regulatory protein, C terminal AVENP_1706 PF00072 Response regulator receiver domain AVENP_1707 PF00375 Sodium:dicarboxylate symporter family AVENP_1709 PF13847 Methyltransferase domain AVENP_1710 PF08501 Shikimate dehydrogenase substrate binding domain AVENP_1715 PF03738 Glutathionylspermidine synthase preATP-grasp AVENP_1718 PF01653 NAD-dependent DNA ligase adenylation domain AVENP_1718 PF03120 NAD-dependent DNA ligase OB-fold domain AVENP_1718 PF12826 Helix-hairpin-helix motif AVENP_1718 PF00533 BRCA1 C Terminus (BRCT) domain AVENP_1720 PF02541 Ppx/GppA phosphatase family AVENP_1722 PF00563 EAL domain AVENP_1722 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1722 PF00360 Phytochrome region AVENP_1722 PF01590 GAF domain AVENP_1726 PF01171 PP-loop family AVENP_1729 PF00994 Probable molybdopterin binding domain AVENP_1729 PF03454 MoeA C-terminal region (domain IV) AVENP_1729 PF03453 MoeA N-terminal region (domain I and II) AVENP_1730 PF03773 Predicted permease AVENP_1731 PF02646 RmuC family AVENP_1732 PF01435 Peptidase family M48 AVENP_1732 PF16491 CAAX prenyl protease N-terminal, five membrane helices AVENP_1734 PF03061 Thioesterase superfamily AVENP_1737 PF00672 HAMP domain AVENP_1737 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_1737 PF02203 Tar ligand binding domain homologue AVENP_1738 PF00248 Aldo/keto reductase family AVENP_1741 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVENP_1746 PF01888 CbiD AVENP_1747 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVENP_1748 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVENP_1749 PF11760 Cobalamin synthesis G N-terminal AVENP_1749 PF11761 Cobalamin biosynthesis central region AVENP_1749 PF01890 Cobalamin synthesis G C-terminus AVENP_1750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVENP_1752 PF01638 HxlR-like helix-turn-helix AVENP_1753 PF02525 Flavodoxin-like fold AVENP_1754 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AVENP_1755 PF08212 Lipocalin-like domain AVENP_1760 PF00072 Response regulator receiver domain AVENP_1760 PF12833 Helix-turn-helix domain AVENP_1768 PF16671 Actin cross-linking domain AVENP_1768 PF04717 Type VI secretion system, phage-baseplate injector AVENP_1770 PF00881 Nitroreductase family AVENP_1772 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVENP_1774 PF00881 Nitroreductase family AVENP_1775 PF02525 Flavodoxin-like fold AVENP_1776 PF01638 HxlR-like helix-turn-helix AVENP_1780 PF03601 Conserved hypothetical protein 698 AVENP_1781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVENP_1781 PF03466 LysR substrate binding domain AVENP_1784 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1789 PF02525 Flavodoxin-like fold AVENP_1790 PF01638 HxlR-like helix-turn-helix AVENP_1793 PF00440 Bacterial regulatory proteins, tetR family AVENP_1793 PF16925 Tetracyclin repressor-like, C-terminal domain AVENP_1795 PF03831 PhnA domain AVENP_1795 PF08274 PhnA Zinc-Ribbon AVENP_1797 PF08240 Alcohol dehydrogenase GroES-like domain AVENP_1797 PF00107 Zinc-binding dehydrogenase AVENP_1798 PF00005 ABC transporter AVENP_1798 PF12848 ABC transporter AVENP_1800 PF00561 alpha/beta hydrolase fold AVENP_1802 PF00800 Prephenate dehydratase AVENP_1802 PF01817 Chorismate mutase type II AVENP_1804 PF00005 ABC transporter AVENP_1805 PF03062 MBOAT, membrane-bound O-acyltransferase family AVENP_1808 PF02543 Carbamoyltransferase N-terminus AVENP_1808 PF16861 Carbamoyltransferase C-terminus AVENP_1812 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVENP_1812 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVENP_1812 PF02142 MGS-like domain AVENP_1813 PF01810 LysE type translocator AVENP_1814 PF00899 ThiF family AVENP_1816 PF18766 SWI2/SNF2 ATPase AVENP_1816 PF12008 Type I restriction and modification enzyme - subunit R C terminal AVENP_1816 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AVENP_1818 PF12161 HsdM N-terminal domain AVENP_1818 PF02384 N-6 DNA Methylase AVENP_1819 PF04002 RadC-like JAB domain AVENP_1820 PF02609 Exonuclease VII small subunit AVENP_1821 PF00561 alpha/beta hydrolase fold AVENP_1826 PF12327 FtsZ family, C-terminal domain AVENP_1826 PF00091 Tubulin/FtsZ family, GTPase domain AVENP_1827 PF02491 SHS2 domain inserted in FTSA AVENP_1831 PF03960 ArsC family AVENP_1833 PF05199 GMC oxidoreductase AVENP_1833 PF00732 GMC oxidoreductase AVENP_1836 PF01312 FlhB HrpN YscU SpaS Family AVENP_1838 PF00905 Penicillin binding protein transpeptidase domain AVENP_1838 PF03717 Penicillin-binding Protein dimerisation domain AVENP_1839 PF00813 FliP family AVENP_1840 PF00512 His Kinase A (phospho-acceptor) domain AVENP_1840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1840 PF00672 HAMP domain AVENP_1841 PF00581 Rhodanese-like domain AVENP_1843 PF00529 HlyD membrane-fusion protein of T1SS AVENP_1843 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVENP_1844 PF00873 AcrB/AcrD/AcrF family AVENP_1845 PF00873 AcrB/AcrD/AcrF family AVENP_1849 PF00392 Bacterial regulatory proteins, gntR family AVENP_1849 PF00155 Aminotransferase class I and II AVENP_1852 PF00583 Acetyltransferase (GNAT) family AVENP_1853 PF01926 50S ribosome-binding GTPase AVENP_1857 PF00475 Imidazoleglycerol-phosphate dehydratase AVENP_1858 PF03330 Lytic transglycolase AVENP_1858 PF05036 Sporulation related domain AVENP_1860 PF01026 TatD related DNase AVENP_1862 PF07724 AAA domain (Cdc48 subfamily) AVENP_1862 PF10431 C-terminal, D2-small domain, of ClpB protein AVENP_1863 PF00227 Proteasome subunit AVENP_1864 PF01281 Ribosomal protein L9, N-terminal domain AVENP_1864 PF03948 Ribosomal protein L9, C-terminal domain AVENP_1866 PF02441 Flavoprotein AVENP_1867 PF01467 Cytidylyltransferase-like AVENP_1868 PF02223 Thymidylate kinase AVENP_1869 PF03129 Anticodon binding domain AVENP_1869 PF13393 Histidyl-tRNA synthetase AVENP_1870 PF17810 Arginine decarboxylase helical bundle domain AVENP_1870 PF17944 Arginine decarboxylase C-terminal helical extension AVENP_1870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVENP_1871 PF06426 Serine acetyltransferase, N-terminal AVENP_1871 PF00132 Bacterial transferase hexapeptide (six repeats) AVENP_1873 PF00271 Helicase conserved C-terminal domain AVENP_1873 PF00270 DEAD/DEAH box helicase AVENP_1876 PF17932 Tetracyclin repressor-like, C-terminal domain AVENP_1876 PF00440 Bacterial regulatory proteins, tetR family AVENP_1878 PF00171 Aldehyde dehydrogenase family AVENP_1879 PF01161 Phosphatidylethanolamine-binding protein AVENP_1880 PF12833 Helix-turn-helix domain AVENP_1881 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1881 PF08448 PAS fold AVENP_1881 PF08447 PAS fold AVENP_1883 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVENP_1885 PF02627 Carboxymuconolactone decarboxylase family AVENP_1887 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1887 PF00072 Response regulator receiver domain AVENP_1888 PF02254 TrkA-N domain AVENP_1888 PF00999 Sodium/hydrogen exchanger family AVENP_1889 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVENP_1890 PF17760 UvrA interaction domain AVENP_1890 PF17755 UvrA DNA-binding domain AVENP_1893 PF03471 Transporter associated domain AVENP_1893 PF00571 CBS domain AVENP_1897 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_1897 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVENP_1898 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVENP_1898 PF00364 Biotin-requiring enzyme AVENP_1898 PF02817 e3 binding domain AVENP_1899 PF17831 Pyruvate dehydrogenase E1 component middle domain AVENP_1899 PF00456 Transketolase, thiamine diphosphate binding domain AVENP_1900 PF03099 Biotin/lipoate A/B protein ligase family AVENP_1901 PF04055 Radical SAM superfamily AVENP_1902 PF00056 lactate/malate dehydrogenase, NAD binding domain AVENP_1902 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVENP_1903 PF01594 AI-2E family transporter AVENP_1906 PF01471 Putative peptidoglycan binding domain AVENP_1906 PF03734 L,D-transpeptidase catalytic domain AVENP_1907 PF01595 Cyclin M transmembrane N-terminal domain AVENP_1907 PF03471 Transporter associated domain AVENP_1907 PF00571 CBS domain AVENP_1910 PF00072 Response regulator receiver domain AVENP_1910 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1914 PF07690 Major Facilitator Superfamily AVENP_1915 PF07729 FCD domain AVENP_1915 PF00392 Bacterial regulatory proteins, gntR family AVENP_1916 PF07690 Major Facilitator Superfamily AVENP_1917 PF00375 Sodium:dicarboxylate symporter family AVENP_1919 PF01272 Transcription elongation factor, GreA/GreB, C-term AVENP_1919 PF03449 Transcription elongation factor, N-terminal AVENP_1921 PF03960 ArsC family AVENP_1922 PF02463 RecF/RecN/SMC N terminal domain AVENP_1927 PF00849 RNA pseudouridylate synthase AVENP_1930 PF01810 LysE type translocator AVENP_1931 PF17746 SfsA N-terminal OB domain AVENP_1931 PF03749 Sugar fermentation stimulation protein RE domain AVENP_1936 PF07690 Major Facilitator Superfamily AVENP_1937 PF13533 Biotin-lipoyl like AVENP_1938 PF02321 Outer membrane efflux protein AVENP_1939 PF00440 Bacterial regulatory proteins, tetR family AVENP_1940 PF00563 EAL domain AVENP_1940 PF03707 Bacterial signalling protein N terminal repeat AVENP_1940 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1947 PF01479 S4 domain AVENP_1947 PF00849 RNA pseudouridylate synthase AVENP_1951 PF06100 MCRA family AVENP_1953 PF08448 PAS fold AVENP_1953 PF08447 PAS fold AVENP_1953 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1957 PF00583 Acetyltransferase (GNAT) family AVENP_1958 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVENP_1960 PF00117 Glutamine amidotransferase class-I AVENP_1960 PF00958 GMP synthase C terminal domain AVENP_1960 PF02540 NAD synthase AVENP_1961 PF03600 Citrate transporter AVENP_1962 PF00890 FAD binding domain AVENP_1966 PF00155 Aminotransferase class I and II AVENP_1967 PF16916 Dimerisation domain of Zinc Transporter AVENP_1967 PF01545 Cation efflux family AVENP_1969 PF00211 Adenylate and Guanylate cyclase catalytic domain AVENP_1976 PF17151 Periplasmic sensor domain AVENP_1976 PF00990 Diguanylate cyclase, GGDEF domain AVENP_1978 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_1979 PF00072 Response regulator receiver domain AVENP_1979 PF00486 Transcriptional regulatory protein, C terminal AVENP_1981 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVENP_1983 PF02397 Bacterial sugar transferase AVENP_1985 PF00534 Glycosyl transferases group 1 AVENP_1986 PF00535 Glycosyl transferase family 2 AVENP_1988 PF01757 Acyltransferase family AVENP_1991 PF00483 Nucleotidyl transferase AVENP_1993 PF01370 NAD dependent epimerase/dehydratase family AVENP_1995 PF03102 NeuB family AVENP_1995 PF08666 SAF domain AVENP_1996 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVENP_1997 PF02719 Polysaccharide biosynthesis protein AVENP_1998 PF01370 NAD dependent epimerase/dehydratase family AVENP_1999 PF16363 GDP-mannose 4,6 dehydratase AVENP_2000 PF01050 Mannose-6-phosphate isomerase AVENP_2000 PF00483 Nucleotidyl transferase AVENP_2001 PF04321 RmlD substrate binding domain AVENP_2002 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVENP_2013 PF02146 Sir2 family AVENP_2014 PF00106 short chain dehydrogenase AVENP_2015 PF03553 Na+/H+ antiporter family AVENP_2016 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_2016 PF12911 N-terminal TM domain of oligopeptide transport permease C AVENP_2018 PF01966 HD domain AVENP_2018 PF00013 KH domain AVENP_2018 PF12072 Domain of unknown function (DUF3552) AVENP_2020 PF00578 AhpC/TSA family AVENP_2021 PF00448 SRP54-type protein, GTPase domain AVENP_2025 PF03797 Autotransporter beta-domain AVENP_2029 PF02203 Tar ligand binding domain homologue AVENP_2029 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2029 PF00672 HAMP domain AVENP_2030 PF18073 Rubredoxin metal binding domain AVENP_2031 PF02130 Uncharacterized protein family UPF0054 AVENP_2033 PF02915 Rubrerythrin AVENP_2034 PF02915 Rubrerythrin AVENP_2036 PF03023 Lipid II flippase MurJ AVENP_2037 PF00005 ABC transporter AVENP_2037 PF00664 ABC transporter transmembrane region AVENP_2038 PF01180 Dihydroorotate dehydrogenase AVENP_2041 PF00701 Dihydrodipicolinate synthetase family AVENP_2043 PF01066 CDP-alcohol phosphatidyltransferase AVENP_2044 PF17820 PDZ domain AVENP_2044 PF02163 Peptidase family M50 AVENP_2045 PF01168 Alanine racemase, N-terminal domain AVENP_2046 PF01361 Tautomerase enzyme AVENP_2048 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVENP_2048 PF03466 LysR substrate binding domain AVENP_2049 PF00218 Indole-3-glycerol phosphate synthase AVENP_2051 PF03692 Putative zinc- or iron-chelating domain AVENP_2052 PF05175 Methyltransferase small domain AVENP_2054 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AVENP_2054 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AVENP_2054 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AVENP_2055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVENP_2057 PF13291 ACT domain AVENP_2057 PF04607 Region found in RelA / SpoT proteins AVENP_2057 PF02824 TGS domain AVENP_2058 PF11490 DNA polymerase III polC-type N-terminus II AVENP_2058 PF14480 DNA polymerase III polC-type N-terminus I AVENP_2058 PF00929 Exonuclease AVENP_2058 PF02811 PHP domain AVENP_2058 PF14579 Helix-hairpin-helix motif AVENP_2058 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVENP_2058 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVENP_2059 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVENP_2060 PF00834 Ribulose-phosphate 3 epimerase family AVENP_2061 PF02253 Phospholipase A1 AVENP_2063 PF00293 NUDIX domain AVENP_2064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2065 PF00486 Transcriptional regulatory protein, C terminal AVENP_2065 PF00072 Response regulator receiver domain AVENP_2067 PF01435 Peptidase family M48 AVENP_2068 PF04011 LemA family AVENP_2069 PF04461 Protein of unknown function (DUF520) AVENP_2070 PF00860 Permease family AVENP_2073 PF04241 Protein of unknown function (DUF423) AVENP_2075 PF00156 Phosphoribosyl transferase domain AVENP_2082 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVENP_2082 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVENP_2082 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVENP_2082 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVENP_2083 PF00483 Nucleotidyl transferase AVENP_2084 PF00342 Phosphoglucose isomerase AVENP_2087 PF13520 Amino acid permease AVENP_2088 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AVENP_2089 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AVENP_2092 PF03372 Endonuclease/Exonuclease/phosphatase family AVENP_2097 PF08448 PAS fold AVENP_2097 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2101 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVENP_2102 PF00873 AcrB/AcrD/AcrF family AVENP_2103 PF08447 PAS fold AVENP_2103 PF08448 PAS fold AVENP_2103 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2104 PF00672 HAMP domain AVENP_2104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2104 PF01627 Hpt domain AVENP_2104 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVENP_2104 PF00072 Response regulator receiver domain AVENP_2104 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2109 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2111 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2111 PF10442 FIST C domain AVENP_2111 PF00563 EAL domain AVENP_2111 PF08495 FIST N domain AVENP_2112 PF02562 PhoH-like protein AVENP_2112 PF13638 PIN domain AVENP_2115 PF01243 Pyridoxamine 5'-phosphate oxidase AVENP_2115 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVENP_2118 PF00563 EAL domain AVENP_2118 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2118 PF03707 Bacterial signalling protein N terminal repeat AVENP_2122 PF10442 FIST C domain AVENP_2122 PF08495 FIST N domain AVENP_2122 PF00563 EAL domain AVENP_2122 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2124 PF02626 Carboxyltransferase domain, subdomain A and B AVENP_2126 PF03746 LamB/YcsF family AVENP_2127 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVENP_2129 PF03480 Bacterial extracellular solute-binding protein, family 7 AVENP_2130 PF12833 Helix-turn-helix domain AVENP_2130 PF00072 Response regulator receiver domain AVENP_2131 PF02743 Cache domain AVENP_2131 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2137 PF00183 Hsp90 protein AVENP_2138 PF00672 HAMP domain AVENP_2138 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2138 PF02203 Tar ligand binding domain homologue AVENP_2139 PF07690 Major Facilitator Superfamily AVENP_2140 PF00248 Aldo/keto reductase family AVENP_2141 PF01614 Bacterial transcriptional regulator AVENP_2141 PF09339 IclR helix-turn-helix domain AVENP_2143 PF03061 Thioesterase superfamily AVENP_2144 PF13607 Succinyl-CoA ligase like flavodoxin domain AVENP_2144 PF13380 CoA binding domain AVENP_2145 PF00171 Aldehyde dehydrogenase family AVENP_2146 PF03480 Bacterial extracellular solute-binding protein, family 7 AVENP_2147 PF00378 Enoyl-CoA hydratase/isomerase AVENP_2150 PF01494 FAD binding domain AVENP_2155 PF00355 Rieske [2Fe-2S] domain AVENP_2157 PF03480 Bacterial extracellular solute-binding protein, family 7 AVENP_2158 PF07976 Phenol hydroxylase, C-terminal dimerisation domain AVENP_2158 PF01494 FAD binding domain AVENP_2160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVENP_2162 PF03480 Bacterial extracellular solute-binding protein, family 7 AVENP_2163 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVENP_2164 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVENP_2166 PF04909 Amidohydrolase AVENP_2167 PF03737 Aldolase/RraA AVENP_2168 PF04909 Amidohydrolase AVENP_2169 PF04303 PrpF protein AVENP_2171 PF00023 Ankyrin repeat AVENP_2171 PF12796 Ankyrin repeats (3 copies) AVENP_2172 PF00199 Catalase AVENP_2172 PF06628 Catalase-related immune-responsive AVENP_2174 PF04403 Paraquat-inducible protein A AVENP_2177 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2177 PF00563 EAL domain AVENP_2177 PF08448 PAS fold AVENP_2181 PF04073 Aminoacyl-tRNA editing domain AVENP_2182 PF08713 DNA alkylation repair enzyme AVENP_2185 PF12833 Helix-turn-helix domain AVENP_2186 PF01966 HD domain AVENP_2187 PF07715 TonB-dependent Receptor Plug Domain AVENP_2187 PF00593 TonB dependent receptor AVENP_2190 PF00491 Arginase family AVENP_2191 PF00682 HMGL-like AVENP_2191 PF08502 LeuA allosteric (dimerisation) domain AVENP_2192 PF12833 Helix-turn-helix domain AVENP_2193 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVENP_2193 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVENP_2198 PF01925 Sulfite exporter TauE/SafE AVENP_2199 PF02833 DHHA2 domain AVENP_2199 PF01368 DHH family AVENP_2203 PF10415 Fumarase C C-terminus AVENP_2203 PF00206 Lyase AVENP_2204 PF00486 Transcriptional regulatory protein, C terminal AVENP_2204 PF00072 Response regulator receiver domain AVENP_2205 PF02743 Cache domain AVENP_2205 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2206 PF01235 Sodium:alanine symporter family AVENP_2207 PF01048 Phosphorylase superfamily AVENP_2208 PF00698 Acyl transferase domain AVENP_2209 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVENP_2212 PF04052 TolB amino-terminal domain AVENP_2214 PF02472 Biopolymer transport protein ExbD/TolR AVENP_2215 PF01618 MotA/TolQ/ExbB proton channel family AVENP_2216 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVENP_2217 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVENP_2217 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVENP_2218 PF00231 ATP synthase AVENP_2219 PF00306 ATP synthase alpha/beta chain, C terminal domain AVENP_2219 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVENP_2219 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVENP_2220 PF00213 ATP synthase delta (OSCP) subunit AVENP_2221 PF00430 ATP synthase B/B' CF(0) AVENP_2223 PF02195 ParB-like nuclease domain AVENP_2223 PF17762 HTH domain found in ParB protein AVENP_2224 PF13614 AAA domain AVENP_2225 PF03099 Biotin/lipoate A/B protein ligase family AVENP_2225 PF02237 Biotin protein ligase C terminal domain AVENP_2225 PF08279 HTH domain AVENP_2228 PF00551 Formyl transferase AVENP_2228 PF02911 Formyl transferase, C-terminal domain AVENP_2229 PF00696 Amino acid kinase family AVENP_2230 PF01926 50S ribosome-binding GTPase AVENP_2230 PF01018 GTP1/OBG AVENP_2231 PF01016 Ribosomal L27 protein AVENP_2232 PF00829 Ribosomal prokaryotic L21 protein AVENP_2233 PF01042 Endoribonuclease L-PSP AVENP_2234 PF13662 Toprim domain AVENP_2234 PF01807 CHC2 zinc finger AVENP_2234 PF16730 DnaG-primase C-terminal, helicase-binding domain AVENP_2234 PF08275 DNA primase catalytic core, N-terminal domain AVENP_2236 PF14622 Ribonuclease-III-like AVENP_2236 PF00035 Double-stranded RNA binding motif AVENP_2237 PF01264 Chorismate synthase AVENP_2238 PF00768 D-alanyl-D-alanine carboxypeptidase AVENP_2238 PF07943 Penicillin-binding protein 5, C-terminal domain AVENP_2239 PF01435 Peptidase family M48 AVENP_2241 PF00300 Histidine phosphatase superfamily (branch 1) AVENP_2243 PF12631 MnmE helical domain AVENP_2243 PF01926 50S ribosome-binding GTPase AVENP_2243 PF10396 GTP-binding protein TrmE N-terminus AVENP_2245 PF14849 YidC periplasmic domain AVENP_2245 PF02096 60Kd inner membrane protein AVENP_2246 PF01809 Putative membrane protein insertion efficiency factor AVENP_2247 PF00825 Ribonuclease P AVENP_2248 PF00468 Ribosomal protein L34 AVENP_2249 PF10431 C-terminal, D2-small domain, of ClpB protein AVENP_2249 PF02861 Clp amino terminal domain, pathogenicity island component AVENP_2249 PF17871 AAA lid domain AVENP_2249 PF07724 AAA domain (Cdc48 subfamily) AVENP_2249 PF00004 ATPase family associated with various cellular activities (AAA) AVENP_2250 PF01351 Ribonuclease HII AVENP_2253 PF01625 Peptide methionine sulfoxide reductase AVENP_2254 PF03062 MBOAT, membrane-bound O-acyltransferase family AVENP_2256 PF03062 MBOAT, membrane-bound O-acyltransferase family AVENP_2258 PF01641 SelR domain AVENP_2259 PF00486 Transcriptional regulatory protein, C terminal AVENP_2259 PF00072 Response regulator receiver domain AVENP_2260 PF00072 Response regulator receiver domain AVENP_2261 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2261 PF00072 Response regulator receiver domain AVENP_2261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2261 PF09308 LuxQ, periplasmic AVENP_2262 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVENP_2265 PF00202 Aminotransferase class-III AVENP_2266 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2266 PF08448 PAS fold AVENP_2266 PF08447 PAS fold AVENP_2268 PF07690 Major Facilitator Superfamily AVENP_2271 PF02142 MGS-like domain AVENP_2271 PF01808 AICARFT/IMPCHase bienzyme AVENP_2272 PF00909 Ammonium Transporter Family AVENP_2273 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVENP_2273 PF00586 AIR synthase related protein, N-terminal domain AVENP_2273 PF02769 AIR synthase related protein, C-terminal domain AVENP_2275 PF01551 Peptidase family M23 AVENP_2275 PF01464 Transglycosylase SLT domain AVENP_2275 PF10145 Phage-related minor tail protein AVENP_2277 PF00583 Acetyltransferase (GNAT) family AVENP_2278 PF00202 Aminotransferase class-III AVENP_2279 PF06339 Ectoine synthase AVENP_2280 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AVENP_2281 PF13840 ACT domain AVENP_2281 PF00696 Amino acid kinase family AVENP_2285 PF02463 RecF/RecN/SMC N terminal domain AVENP_2287 PF02384 N-6 DNA Methylase AVENP_2287 PF12161 HsdM N-terminal domain AVENP_2288 PF13538 UvrD-like helicase C-terminal domain AVENP_2288 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AVENP_2288 PF14490 Helix-hairpin-helix containing domain AVENP_2298 PF06067 Domain of unknown function (DUF932) AVENP_2302 PF01227 GTP cyclohydrolase I AVENP_2303 PF01544 CorA-like Mg2+ transporter protein AVENP_2304 PF00482 Type II secretion system (T2SS), protein F AVENP_2305 PF00437 Type II/IV secretion system protein AVENP_2308 PF07650 KH domain AVENP_2308 PF01926 50S ribosome-binding GTPase AVENP_2309 PF01078 Magnesium chelatase, subunit ChlI AVENP_2309 PF13335 Magnesium chelatase, subunit ChlI C-terminal AVENP_2311 PF01327 Polypeptide deformylase AVENP_2312 PF00574 Clp protease AVENP_2313 PF05698 Bacterial trigger factor protein (TF) C-terminus AVENP_2313 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVENP_2313 PF05697 Bacterial trigger factor protein (TF) AVENP_2314 PF03976 Polyphosphate kinase 2 (PPK2) AVENP_2315 PF03976 Polyphosphate kinase 2 (PPK2) AVENP_2316 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVENP_2317 PF00301 Rubredoxin AVENP_2318 PF16653 Saccharopine dehydrogenase C-terminal domain AVENP_2318 PF03435 Saccharopine dehydrogenase NADP binding domain AVENP_2324 PF07690 Major Facilitator Superfamily AVENP_2326 PF00107 Zinc-binding dehydrogenase AVENP_2326 PF08240 Alcohol dehydrogenase GroES-like domain AVENP_2327 PF06719 AraC-type transcriptional regulator N-terminus AVENP_2327 PF12833 Helix-turn-helix domain AVENP_2328 PF07152 YaeQ protein AVENP_2330 PF01053 Cys/Met metabolism PLP-dependent enzyme AVENP_2331 PF01053 Cys/Met metabolism PLP-dependent enzyme AVENP_2332 PF00072 Response regulator receiver domain AVENP_2332 PF00486 Transcriptional regulatory protein, C terminal AVENP_2333 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2333 PF02743 Cache domain AVENP_2333 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2335 PF08447 PAS fold AVENP_2336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2336 PF02895 Signal transducing histidine kinase, homodimeric domain AVENP_2336 PF01627 Hpt domain AVENP_2336 PF01584 CheW-like domain AVENP_2336 PF09078 CheY binding AVENP_2339 PF00034 Cytochrome c AVENP_2341 PF00072 Response regulator receiver domain AVENP_2341 PF00486 Transcriptional regulatory protein, C terminal AVENP_2343 PF03824 High-affinity nickel-transport protein AVENP_2346 PF06965 Na+/H+ antiporter 1 AVENP_2347 PF02311 AraC-like ligand binding domain AVENP_2347 PF12833 Helix-turn-helix domain AVENP_2350 PF00375 Sodium:dicarboxylate symporter family AVENP_2351 PF00672 HAMP domain AVENP_2351 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2351 PF02203 Tar ligand binding domain homologue AVENP_2352 PF12833 Helix-turn-helix domain AVENP_2355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2355 PF08447 PAS fold AVENP_2355 PF08448 PAS fold AVENP_2356 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2356 PF00672 HAMP domain AVENP_2356 PF02203 Tar ligand binding domain homologue AVENP_2358 PF10442 FIST C domain AVENP_2358 PF08495 FIST N domain AVENP_2358 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2358 PF00563 EAL domain AVENP_2359 PF02203 Tar ligand binding domain homologue AVENP_2359 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2359 PF00672 HAMP domain AVENP_2360 PF00563 EAL domain AVENP_2360 PF12792 CSS motif domain associated with EAL AVENP_2361 PF07690 Major Facilitator Superfamily AVENP_2362 PF03793 PASTA domain AVENP_2362 PF00069 Protein kinase domain AVENP_2363 PF00563 EAL domain AVENP_2363 PF08495 FIST N domain AVENP_2363 PF10442 FIST C domain AVENP_2363 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2364 PF04324 BFD-like [2Fe-2S] binding domain AVENP_2364 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVENP_2364 PF00384 Molybdopterin oxidoreductase AVENP_2364 PF01568 Molydopterin dinucleotide binding domain AVENP_2366 PF00563 EAL domain AVENP_2366 PF08495 FIST N domain AVENP_2366 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2366 PF10442 FIST C domain AVENP_2367 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2367 PF00672 HAMP domain AVENP_2367 PF02203 Tar ligand binding domain homologue AVENP_2368 PF17850 CysA C-terminal regulatory domain AVENP_2368 PF12857 TOBE-like domain AVENP_2368 PF00005 ABC transporter AVENP_2369 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_2370 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_2372 PF02082 Transcriptional regulator AVENP_2373 PF04324 BFD-like [2Fe-2S] binding domain AVENP_2373 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVENP_2373 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVENP_2373 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_2373 PF18267 Rubredoxin NAD+ reductase C-terminal domain AVENP_2378 PF03150 Di-haem cytochrome c peroxidase AVENP_2379 PF04116 Fatty acid hydroxylase superfamily AVENP_2384 PF00137 ATP synthase subunit C AVENP_2385 PF00672 HAMP domain AVENP_2385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2385 PF02203 Tar ligand binding domain homologue AVENP_2387 PF00072 Response regulator receiver domain AVENP_2387 PF00486 Transcriptional regulatory protein, C terminal AVENP_2388 PF12282 Signal transduction histidine kinase AVENP_2388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2388 PF07568 Histidine kinase AVENP_2390 PF00580 UvrD/REP helicase N-terminal domain AVENP_2390 PF13361 UvrD-like helicase C-terminal domain AVENP_2392 PF00924 Mechanosensitive ion channel AVENP_2398 PF00171 Aldehyde dehydrogenase family AVENP_2401 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVENP_2401 PF12801 4Fe-4S binding domain AVENP_2401 PF13746 4Fe-4S dicluster domain AVENP_2402 PF08447 PAS fold AVENP_2402 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2402 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2402 PF00989 PAS fold AVENP_2403 PF00072 Response regulator receiver domain AVENP_2403 PF12833 Helix-turn-helix domain AVENP_2405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVENP_2405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVENP_2405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVENP_2405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVENP_2406 PF00795 Carbon-nitrogen hydrolase AVENP_2411 PF00258 Flavodoxin AVENP_2412 PF01475 Ferric uptake regulator family AVENP_2414 PF07664 Ferrous iron transport protein B C terminus AVENP_2414 PF02421 Ferrous iron transport protein B AVENP_2414 PF07670 Nucleoside recognition AVENP_2422 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVENP_2423 PF00072 Response regulator receiver domain AVENP_2426 PF11849 Domain of unknown function (DUF3369) AVENP_2427 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AVENP_2427 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVENP_2433 PF04055 Radical SAM superfamily AVENP_2434 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVENP_2436 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVENP_2436 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVENP_2437 PF00521 DNA gyrase/topoisomerase IV, subunit A AVENP_2437 PF03989 DNA gyrase C-terminal domain, beta-propeller AVENP_2439 PF01960 ArgJ family AVENP_2441 PF00830 Ribosomal L28 family AVENP_2444 PF13439 Glycosyltransferase Family 4 AVENP_2444 PF00534 Glycosyl transferases group 1 AVENP_2449 PF01522 Polysaccharide deacetylase AVENP_2452 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVENP_2452 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVENP_2452 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVENP_2455 PF02541 Ppx/GppA phosphatase family AVENP_2456 PF12838 4Fe-4S dicluster domain AVENP_2457 PF00459 Inositol monophosphatase family AVENP_2458 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVENP_2458 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_2459 PF04898 Glutamate synthase central domain AVENP_2459 PF01493 GXGXG motif AVENP_2459 PF01645 Conserved region in glutamate synthase AVENP_2459 PF00310 Glutamine amidotransferases class-II AVENP_2460 PF03480 Bacterial extracellular solute-binding protein, family 7 AVENP_2462 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVENP_2463 PF03009 Glycerophosphoryl diester phosphodiesterase family AVENP_2464 PF08448 PAS fold AVENP_2464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2464 PF08447 PAS fold AVENP_2465 PF00072 Response regulator receiver domain AVENP_2465 PF00486 Transcriptional regulatory protein, C terminal AVENP_2469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2469 PF02203 Tar ligand binding domain homologue AVENP_2469 PF00672 HAMP domain AVENP_2472 PF00072 Response regulator receiver domain AVENP_2472 PF00989 PAS fold AVENP_2472 PF01627 Hpt domain AVENP_2472 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2472 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVENP_2472 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2483 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVENP_2484 PF01029 NusB family AVENP_2485 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVENP_2486 PF00793 DAHP synthetase I family AVENP_2491 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVENP_2496 PF00437 Type II/IV secretion system protein AVENP_2497 PF03958 Bacterial type II/III secretion system short domain AVENP_2497 PF00263 Bacterial type II and III secretion system protein AVENP_2503 PF00482 Type II secretion system (T2SS), protein F AVENP_2505 PF08334 Type II secretion system (T2SS), protein G AVENP_2505 PF07963 Prokaryotic N-terminal methylation motif AVENP_2508 PF09186 Domain of unknown function (DUF1949) AVENP_2508 PF01205 Uncharacterized protein family UPF0029 AVENP_2509 PF01728 FtsJ-like methyltransferase AVENP_2509 PF01479 S4 domain AVENP_2510 PF01687 Riboflavin kinase AVENP_2510 PF06574 FAD synthetase AVENP_2511 PF13649 Methyltransferase domain AVENP_2512 PF00578 AhpC/TSA family AVENP_2514 PF02913 FAD linked oxidases, C-terminal domain AVENP_2514 PF01565 FAD binding domain AVENP_2515 PF03631 Virulence factor BrkB AVENP_2526 PF00004 ATPase family associated with various cellular activities (AAA) AVENP_2526 PF02861 Clp amino terminal domain, pathogenicity island component AVENP_2526 PF10431 C-terminal, D2-small domain, of ClpB protein AVENP_2526 PF07724 AAA domain (Cdc48 subfamily) AVENP_2526 PF17871 AAA lid domain AVENP_2527 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVENP_2528 PF07726 ATPase family associated with various cellular activities (AAA) AVENP_2528 PF17863 AAA lid domain AVENP_2531 PF07584 Aerotolerance regulator N-terminal AVENP_2531 PF13519 von Willebrand factor type A domain AVENP_2532 PF13519 von Willebrand factor type A domain AVENP_2537 PF00501 AMP-binding enzyme AVENP_2537 PF13193 AMP-binding enzyme C-terminal domain AVENP_2538 PF01575 MaoC like domain AVENP_2542 PF02203 Tar ligand binding domain homologue AVENP_2542 PF00672 HAMP domain AVENP_2542 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2543 PF01741 Large-conductance mechanosensitive channel, MscL AVENP_2544 PF01613 Flavin reductase like domain AVENP_2549 PF00771 FHIPEP family AVENP_2550 PF00700 Bacterial flagellin C-terminal helical region AVENP_2550 PF00669 Bacterial flagellin N-terminal helical region AVENP_2551 PF18269 T3SS EscN ATPase C-terminal domain AVENP_2551 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVENP_2553 PF01312 FlhB HrpN YscU SpaS Family AVENP_2556 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVENP_2556 PF00460 Flagella basal body rod protein AVENP_2557 PF02049 Flagellar hook-basal body complex protein FliE AVENP_2559 PF10609 NUBPL iron-transfer P-loop NTPase AVENP_2560 PF00448 SRP54-type protein, GTPase domain AVENP_2565 PF01618 MotA/TolQ/ExbB proton channel family AVENP_2570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVENP_2570 PF00460 Flagella basal body rod protein AVENP_2570 PF07559 Flagellar basal body protein FlaE AVENP_2570 PF07196 Flagellin hook IN motif AVENP_2571 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVENP_2571 PF00460 Flagella basal body rod protein AVENP_2571 PF07559 Flagellar basal body protein FlaE AVENP_2573 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVENP_2575 PF14841 FliG middle domain AVENP_2575 PF14842 FliG N-terminal domain AVENP_2575 PF01706 FliG C-terminal domain AVENP_2576 PF08345 Flagellar M-ring protein C-terminal AVENP_2576 PF01514 Secretory protein of YscJ/FliF family AVENP_2577 PF00460 Flagella basal body rod protein AVENP_2578 PF00460 Flagella basal body rod protein AVENP_2578 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVENP_2580 PF00072 Response regulator receiver domain AVENP_2581 PF00460 Flagella basal body rod protein AVENP_2581 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVENP_2584 PF01782 RimM N-terminal domain AVENP_2586 PF00886 Ribosomal protein S16 AVENP_2587 PF02978 Signal peptide binding domain AVENP_2587 PF00448 SRP54-type protein, GTPase domain AVENP_2587 PF02881 SRP54-type protein, helical bundle domain AVENP_2588 PF01479 S4 domain AVENP_2588 PF00849 RNA pseudouridylate synthase AVENP_2589 PF02390 Putative methyltransferase AVENP_2589 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVENP_2591 PF01784 NIF3 (NGG1p interacting factor 3) AVENP_2592 PF02091 Glycyl-tRNA synthetase alpha subunit AVENP_2594 PF00731 AIR carboxylase AVENP_2597 PF00672 HAMP domain AVENP_2597 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2597 PF17200 Single Cache domain 2 AVENP_2598 PF13476 AAA domain AVENP_2599 PF01513 ATP-NAD kinase AVENP_2600 PF14492 Elongation Factor G, domain II AVENP_2600 PF00009 Elongation factor Tu GTP binding domain AVENP_2600 PF00679 Elongation factor G C-terminus AVENP_2600 PF03144 Elongation factor Tu domain 2 AVENP_2600 PF03764 Elongation factor G, domain IV AVENP_2601 PF00177 Ribosomal protein S7p/S5e AVENP_2602 PF00164 Ribosomal protein S12/S23 AVENP_2603 PF07690 Major Facilitator Superfamily AVENP_2604 PF00561 alpha/beta hydrolase fold AVENP_2606 PF00398 Ribosomal RNA adenine dimethylase AVENP_2607 PF09962 Uncharacterized conserved protein (DUF2196) AVENP_2609 PF02203 Tar ligand binding domain homologue AVENP_2609 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2609 PF00672 HAMP domain AVENP_2613 PF00578 AhpC/TSA family AVENP_2613 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVENP_2614 PF00085 Thioredoxin AVENP_2637 PF13356 Arm DNA-binding domain AVENP_2637 PF00589 Phage integrase family AVENP_2640 PF04998 RNA polymerase Rpb1, domain 5 AVENP_2640 PF04997 RNA polymerase Rpb1, domain 1 AVENP_2640 PF00623 RNA polymerase Rpb1, domain 2 AVENP_2640 PF04983 RNA polymerase Rpb1, domain 3 AVENP_2640 PF05000 RNA polymerase Rpb1, domain 4 AVENP_2641 PF04560 RNA polymerase Rpb2, domain 7 AVENP_2641 PF04563 RNA polymerase beta subunit AVENP_2641 PF04561 RNA polymerase Rpb2, domain 2 AVENP_2641 PF04565 RNA polymerase Rpb2, domain 3 AVENP_2641 PF10385 RNA polymerase beta subunit external 1 domain AVENP_2641 PF00562 RNA polymerase Rpb2, domain 6 AVENP_2642 PF16320 Ribosomal protein L7/L12 dimerisation domain AVENP_2642 PF00542 Ribosomal protein L7/L12 C-terminal domain AVENP_2643 PF00466 Ribosomal protein L10 AVENP_2644 PF00687 Ribosomal protein L1p/L10e family AVENP_2645 PF00298 Ribosomal protein L11, RNA binding domain AVENP_2645 PF03946 Ribosomal protein L11, N-terminal domain AVENP_2646 PF02357 Transcription termination factor nusG AVENP_2649 PF00471 Ribosomal protein L33 AVENP_2650 PF03143 Elongation factor Tu C-terminal domain AVENP_2650 PF00009 Elongation factor Tu GTP binding domain AVENP_2650 PF03144 Elongation factor Tu domain 2 AVENP_2655 PF08245 Mur ligase middle domain AVENP_2656 PF00953 Glycosyl transferase family 4 AVENP_2656 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVENP_2657 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AVENP_2657 PF01676 Metalloenzyme superfamily AVENP_2658 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVENP_2658 PF00005 ABC transporter AVENP_2659 PF00912 Transglycosylase AVENP_2659 PF00905 Penicillin binding protein transpeptidase domain AVENP_2660 PF00120 Glutamine synthetase, catalytic domain AVENP_2660 PF03951 Glutamine synthetase, beta-Grasp domain AVENP_2662 PF02391 MoaE protein AVENP_2664 PF02621 Menaquinone biosynthesis AVENP_2665 PF02673 Bacitracin resistance protein BacA AVENP_2666 PF04101 Glycosyltransferase family 28 C-terminal domain AVENP_2666 PF03033 Glycosyltransferase family 28 N-terminal domain AVENP_2667 PF01098 Cell cycle protein AVENP_2668 PF03793 PASTA domain AVENP_2668 PF00905 Penicillin binding protein transpeptidase domain AVENP_2668 PF03717 Penicillin-binding Protein dimerisation domain AVENP_2669 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVENP_2680 PF00117 Glutamine amidotransferase class-I AVENP_2681 PF13416 Bacterial extracellular solute-binding protein AVENP_2682 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_2683 PF08402 TOBE domain AVENP_2683 PF00005 ABC transporter AVENP_2684 PF08448 PAS fold AVENP_2684 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVENP_2685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVENP_2691 PF00575 S1 RNA binding domain AVENP_2691 PF17674 HHH domain AVENP_2691 PF09371 Tex-like protein N-terminal domain AVENP_2691 PF16921 Tex protein YqgF-like domain AVENP_2693 PF00563 EAL domain AVENP_2693 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2693 PF10442 FIST C domain AVENP_2693 PF08495 FIST N domain AVENP_2694 PF01042 Endoribonuclease L-PSP AVENP_2697 PF01914 MarC family integral membrane protein AVENP_2698 PF00528 Binding-protein-dependent transport system inner membrane component AVENP_2699 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVENP_2700 PF00005 ABC transporter AVENP_2703 PF00392 Bacterial regulatory proteins, gntR family AVENP_2703 PF00155 Aminotransferase class I and II AVENP_2704 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2704 PF00672 HAMP domain AVENP_2704 PF02203 Tar ligand binding domain homologue AVENP_2706 PF00171 Aldehyde dehydrogenase family AVENP_2707 PF00005 ABC transporter AVENP_2708 PF00005 ABC transporter AVENP_2708 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVENP_2709 PF11862 Domain of unknown function (DUF3382) AVENP_2709 PF02653 Branched-chain amino acid transport system / permease component AVENP_2710 PF02653 Branched-chain amino acid transport system / permease component AVENP_2716 PF09335 SNARE associated Golgi protein AVENP_2718 PF01245 Ribosomal protein L19 AVENP_2719 PF01746 tRNA (Guanine-1)-methyltransferase AVENP_2721 PF08267 Cobalamin-independent synthase, N-terminal domain AVENP_2721 PF01717 Cobalamin-independent synthase, Catalytic domain AVENP_2722 PF00291 Pyridoxal-phosphate dependent enzyme AVENP_2722 PF13291 ACT domain AVENP_2723 PF00119 ATP synthase A chain AVENP_2725 PF12705 PD-(D/E)XK nuclease superfamily AVENP_2725 PF00580 UvrD/REP helicase N-terminal domain AVENP_2725 PF13361 UvrD-like helicase C-terminal domain AVENP_2726 PF00696 Amino acid kinase family AVENP_2727 PF00291 Pyridoxal-phosphate dependent enzyme AVENP_2728 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVENP_2728 PF00355 Rieske [2Fe-2S] domain AVENP_2729 PF00032 Cytochrome b(C-terminal)/b6/petD AVENP_2729 PF00033 Cytochrome b/b6/petB AVENP_2732 PF04452 RNA methyltransferase AVENP_2734 PF03454 MoeA C-terminal region (domain IV) AVENP_2734 PF03453 MoeA N-terminal region (domain I and II) AVENP_2734 PF00994 Probable molybdopterin binding domain AVENP_2735 PF06508 Queuosine biosynthesis protein QueC AVENP_2737 PF04055 Radical SAM superfamily AVENP_2739 PF00550 Phosphopantetheine attachment site AVENP_2740 PF00109 Beta-ketoacyl synthase, N-terminal domain AVENP_2740 PF02801 Beta-ketoacyl synthase, C-terminal domain AVENP_2741 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVENP_2742 PF01230 HIT domain AVENP_2743 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVENP_2743 PF01409 tRNA synthetases class II core domain (F) AVENP_2744 PF01588 Putative tRNA binding domain AVENP_2744 PF03147 Ferredoxin-fold anticodon binding domain AVENP_2744 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVENP_2744 PF03484 tRNA synthetase B5 domain AVENP_2745 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVENP_2746 PF02401 LytB protein AVENP_2747 PF00575 S1 RNA binding domain AVENP_2748 PF01842 ACT domain AVENP_2748 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVENP_2748 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVENP_2749 PF01132 Elongation factor P (EF-P) OB domain AVENP_2749 PF08207 Elongation factor P (EF-P) KOW-like domain AVENP_2749 PF09285 Elongation factor P, C-terminal AVENP_2750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVENP_2750 PF01872 RibD C-terminal domain AVENP_2751 PF02576 RimP N-terminal domain AVENP_2752 PF02033 Ribosome-binding factor A AVENP_2753 PF11987 Translation-initiation factor 2 AVENP_2753 PF04760 Translation initiation factor IF-2, N-terminal region AVENP_2753 PF00009 Elongation factor Tu GTP binding domain AVENP_2755 PF00288 GHMP kinases N terminal domain AVENP_2755 PF08544 GHMP kinases C terminal AVENP_2757 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVENP_2758 PF01476 LysM domain AVENP_2758 PF01551 Peptidase family M23 AVENP_2759 PF02272 DHHA1 domain AVENP_2759 PF01368 DHH family AVENP_2760 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVENP_2760 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVENP_2761 PF02445 Quinolinate synthetase A protein AVENP_2762 PF02660 Glycerol-3-phosphate acyltransferase AVENP_2764 PF05538 Campylobacter major outer membrane protein AVENP_2766 PF05538 Campylobacter major outer membrane protein AVENP_2767 PF00472 RF-1 domain AVENP_2767 PF03462 PCRF domain AVENP_2768 PF13533 Biotin-lipoyl like AVENP_2769 PF07869 Protein of unknown function (DUF1656) AVENP_2770 PF04632 Fusaric acid resistance protein family AVENP_2777 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVENP_2777 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVENP_2780 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVENP_2781 PF01668 SmpB protein AVENP_2782 PF00288 GHMP kinases N terminal domain AVENP_2783 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVENP_2784 PF13361 UvrD-like helicase C-terminal domain AVENP_2784 PF00580 UvrD/REP helicase N-terminal domain AVENP_2785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVENP_2785 PF03466 LysR substrate binding domain AVENP_2786 PF00583 Acetyltransferase (GNAT) family AVENP_2786 PF00795 Carbon-nitrogen hydrolase AVENP_2787 PF04055 Radical SAM superfamily AVENP_2787 PF16199 Radical_SAM C-terminal domain AVENP_2788 PF13537 Glutamine amidotransferase domain AVENP_2788 PF00156 Phosphoribosyl transferase domain AVENP_2789 PF05173 Dihydrodipicolinate reductase, C-terminus AVENP_2789 PF01113 Dihydrodipicolinate reductase, N-terminus AVENP_2790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_2791 PF00085 Thioredoxin AVENP_2792 PF02272 DHHA1 domain AVENP_2792 PF01411 tRNA synthetases class II (A) AVENP_2792 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVENP_2796 PF00877 NlpC/P60 family AVENP_2797 PF00877 NlpC/P60 family AVENP_2802 PF02545 Maf-like protein AVENP_2803 PF03150 Di-haem cytochrome c peroxidase AVENP_2803 PF00034 Cytochrome c AVENP_2804 PF02779 Transketolase, pyrimidine binding domain AVENP_2804 PF02780 Transketolase, C-terminal domain AVENP_2804 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVENP_2805 PF00155 Aminotransferase class I and II AVENP_2806 PF01842 ACT domain AVENP_2806 PF01817 Chorismate mutase type II AVENP_2806 PF00800 Prephenate dehydratase AVENP_2807 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVENP_2807 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVENP_2809 PF00121 Triosephosphate isomerase AVENP_2810 PF00162 Phosphoglycerate kinase AVENP_2811 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVENP_2811 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVENP_2812 PF01467 Cytidylyltransferase-like AVENP_2814 PF05746 DALR anticodon binding domain AVENP_2814 PF03485 Arginyl tRNA synthetase N terminal domain AVENP_2814 PF00750 tRNA synthetases class I (R) AVENP_2815 PF02416 mttA/Hcf106 family AVENP_2816 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVENP_2817 PF01553 Acyltransferase AVENP_2820 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AVENP_2821 PF01259 SAICAR synthetase AVENP_2822 PF03572 Peptidase family S41 AVENP_2822 PF13180 PDZ domain AVENP_2825 PF01142 tRNA pseudouridine synthase D (TruD) AVENP_2826 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVENP_2828 PF02687 FtsX-like permease family AVENP_2828 PF00005 ABC transporter AVENP_2828 PF12704 MacB-like periplasmic core domain AVENP_2849 PF00920 Dehydratase family AVENP_2850 PF17820 PDZ domain AVENP_2850 PF13180 PDZ domain AVENP_2851 PF00486 Transcriptional regulatory protein, C terminal AVENP_2851 PF00072 Response regulator receiver domain AVENP_2854 PF03186 CobD/Cbib protein AVENP_2855 PF13460 NAD(P)H-binding AVENP_2855 PF11066 Protein of unknown function (DUF2867) AVENP_2857 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2857 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2858 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVENP_2858 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVENP_2859 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2859 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2863 PF00593 TonB dependent receptor AVENP_2863 PF07715 TonB-dependent Receptor Plug Domain AVENP_2865 PF00155 Aminotransferase class I and II AVENP_2868 PF01914 MarC family integral membrane protein AVENP_2869 PF02277 Phosphoribosyltransferase AVENP_2870 PF00486 Transcriptional regulatory protein, C terminal AVENP_2870 PF00072 Response regulator receiver domain AVENP_2871 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2871 PF00512 His Kinase A (phospho-acceptor) domain AVENP_2871 PF00989 PAS fold AVENP_2871 PF13188 PAS domain AVENP_2871 PF13426 PAS domain AVENP_2872 PF00939 Sodium:sulfate symporter transmembrane region AVENP_2873 PF00072 Response regulator receiver domain AVENP_2873 PF00486 Transcriptional regulatory protein, C terminal AVENP_2874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2874 PF13188 PAS domain AVENP_2874 PF13426 PAS domain AVENP_2875 PF17763 Glutaminase/Asparaginase C-terminal domain AVENP_2875 PF00710 Asparaginase, N-terminal AVENP_2876 PF03605 Anaerobic c4-dicarboxylate membrane transporter AVENP_2877 PF10415 Fumarase C C-terminus AVENP_2877 PF00206 Lyase AVENP_2878 PF00672 HAMP domain AVENP_2878 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2878 PF02743 Cache domain AVENP_2879 PF13183 4Fe-4S dicluster domain AVENP_2879 PF13085 2Fe-2S iron-sulfur cluster binding domain AVENP_2880 PF00890 FAD binding domain AVENP_2880 PF02910 Fumarate reductase flavoprotein C-term AVENP_2881 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVENP_2882 PF01292 Prokaryotic cytochrome b561 AVENP_2883 PF00374 Nickel-dependent hydrogenase AVENP_2884 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AVENP_2884 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVENP_2884 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVENP_2885 PF10442 FIST C domain AVENP_2885 PF00563 EAL domain AVENP_2885 PF08495 FIST N domain AVENP_2885 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2887 PF11412 Disulphide bond corrector protein DsbC AVENP_2887 PF02683 Cytochrome C biogenesis protein transmembrane region AVENP_2888 PF00085 Thioredoxin AVENP_2891 PF08443 RimK-like ATP-grasp domain AVENP_2891 PF18030 RimK PreATP-grasp domain AVENP_2894 PF00563 EAL domain AVENP_2894 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2894 PF10442 FIST C domain AVENP_2894 PF08495 FIST N domain AVENP_2895 PF02666 Phosphatidylserine decarboxylase AVENP_2897 PF00672 HAMP domain AVENP_2897 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_2897 PF12729 Four helix bundle sensory module for signal transduction AVENP_2899 PF00012 Hsp70 protein AVENP_2900 PF01025 GrpE AVENP_2904 PF00072 Response regulator receiver domain AVENP_2904 PF00196 Bacterial regulatory proteins, luxR family AVENP_2905 PF08448 PAS fold AVENP_2905 PF08447 PAS fold AVENP_2905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_2906 PF01416 tRNA pseudouridine synthase AVENP_2908 PF01478 Type IV leader peptidase family AVENP_2908 PF06750 Bacterial Peptidase A24 N-terminal domain AVENP_2909 PF01255 Putative undecaprenyl diphosphate synthase AVENP_2910 PF02441 Flavoprotein AVENP_2910 PF04127 DNA / pantothenate metabolism flavoprotein AVENP_2911 PF14602 Hexapeptide repeat of succinyl-transferase AVENP_2911 PF12804 MobA-like NTP transferase domain AVENP_2913 PF17191 RecG wedge domain AVENP_2913 PF00271 Helicase conserved C-terminal domain AVENP_2913 PF00270 DEAD/DEAH box helicase AVENP_2914 PF05958 tRNA (Uracil-5-)-methyltransferase AVENP_2915 PF00669 Bacterial flagellin N-terminal helical region AVENP_2915 PF07196 Flagellin hook IN motif AVENP_2915 PF00700 Bacterial flagellin C-terminal helical region AVENP_2915 PF07196 Flagellin hook IN motif AVENP_2915 PF00700 Bacterial flagellin C-terminal helical region AVENP_2915 PF00669 Bacterial flagellin N-terminal helical region AVENP_2920 PF08889 WbqC-like protein family AVENP_2923 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVENP_2925 PF00535 Glycosyl transferase family 2 AVENP_2927 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVENP_2928 PF13649 Methyltransferase domain AVENP_2930 PF16363 GDP-mannose 4,6 dehydratase AVENP_2931 PF00535 Glycosyl transferase family 2 AVENP_2932 PF17101 Stealth protein CR1, conserved region 1 AVENP_2932 PF11380 Stealth protein CR2, conserved region 2 AVENP_2932 PF17103 Stealth protein CR4, conserved region 4 AVENP_2935 PF00266 Aminotransferase class-V AVENP_2937 PF13193 AMP-binding enzyme C-terminal domain AVENP_2937 PF00501 AMP-binding enzyme AVENP_2940 PF13302 Acetyltransferase (GNAT) domain AVENP_2942 PF08666 SAF domain AVENP_2942 PF03102 NeuB family AVENP_2943 PF02348 Cytidylyltransferase AVENP_2944 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVENP_2945 PF02719 Polysaccharide biosynthesis protein AVENP_2947 PF00154 recA bacterial DNA recombination protein AVENP_2948 PF03952 Enolase, N-terminal domain AVENP_2948 PF00113 Enolase, C-terminal TIM barrel domain AVENP_2951 PF00999 Sodium/hydrogen exchanger family AVENP_2951 PF02254 TrkA-N domain AVENP_2951 PF02080 TrkA-C domain AVENP_2952 PF06968 Biotin and Thiamin Synthesis associated domain AVENP_2952 PF04055 Radical SAM superfamily AVENP_2954 PF01751 Toprim domain AVENP_2954 PF01131 DNA topoisomerase AVENP_2954 PF13368 Topoisomerase C-terminal repeat AVENP_2955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVENP_2956 PF02621 Menaquinone biosynthesis AVENP_2958 PF00361 Proton-conducting membrane transporter AVENP_2959 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVENP_2959 PF00361 Proton-conducting membrane transporter AVENP_2960 PF00361 Proton-conducting membrane transporter AVENP_2960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVENP_2961 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVENP_2962 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVENP_2963 PF12838 4Fe-4S dicluster domain AVENP_2964 PF00146 NADH dehydrogenase AVENP_2965 PF01568 Molydopterin dinucleotide binding domain AVENP_2965 PF00384 Molybdopterin oxidoreductase AVENP_2965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVENP_2965 PF12838 4Fe-4S dicluster domain AVENP_2965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVENP_2968 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVENP_2969 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVENP_2970 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVENP_2971 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVENP_2972 PF00004 ATPase family associated with various cellular activities (AAA) AVENP_2972 PF16450 Proteasomal ATPase OB C-terminal domain AVENP_2972 PF17758 Proteasomal ATPase OB N-terminal domain AVENP_2978 PF01740 STAS domain AVENP_2978 PF00916 Sulfate permease family AVENP_2981 PF00529 HlyD membrane-fusion protein of T1SS AVENP_2981 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVENP_2982 PF00873 AcrB/AcrD/AcrF family AVENP_2983 PF02321 Outer membrane efflux protein AVENP_2984 PF01261 Xylose isomerase-like TIM barrel AVENP_2985 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVENP_2986 PF00563 EAL domain AVENP_2986 PF08495 FIST N domain AVENP_2986 PF10442 FIST C domain AVENP_2986 PF00990 Diguanylate cyclase, GGDEF domain AVENP_2987 PF00209 Sodium:neurotransmitter symporter family AVENP_2989 PF02677 Epoxyqueuosine reductase QueH AVENP_2990 PF02684 Lipid-A-disaccharide synthetase AVENP_2991 PF07977 FabA-like domain AVENP_2992 PF00132 Bacterial transferase hexapeptide (six repeats) AVENP_2992 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVENP_2993 PF10431 C-terminal, D2-small domain, of ClpB protein AVENP_2993 PF06689 ClpX C4-type zinc finger AVENP_2993 PF07724 AAA domain (Cdc48 subfamily) AVENP_2996 PF00677 Lumazine binding domain AVENP_2997 PF13932 GidA associated domain AVENP_2997 PF01134 Glucose inhibited division protein A AVENP_2999 PF13478 XdhC Rossmann domain AVENP_2999 PF02625 XdhC and CoxI family AVENP_3000 PF00034 Cytochrome c AVENP_3000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVENP_3000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVENP_3001 PF01799 [2Fe-2S] binding domain AVENP_3001 PF00111 2Fe-2S iron-sulfur cluster binding domain AVENP_3004 PF13746 4Fe-4S dicluster domain AVENP_3004 PF12801 4Fe-4S binding domain AVENP_3004 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVENP_3005 PF00117 Glutamine amidotransferase class-I AVENP_3005 PF06418 CTP synthase N-terminus AVENP_3006 PF17768 RecJ OB domain AVENP_3006 PF02272 DHHA1 domain AVENP_3006 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AVENP_3006 PF01368 DHH family AVENP_3012 PF14579 Helix-hairpin-helix motif AVENP_3012 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVENP_3012 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVENP_3012 PF02811 PHP domain AVENP_3013 PF01975 Survival protein SurE AVENP_3016 PF01967 MoaC family AVENP_3017 PF01165 Ribosomal protein S21 AVENP_3020 PF04376 Arginine-tRNA-protein transferase, N terminus AVENP_3020 PF04377 Arginine-tRNA-protein transferase, C terminus AVENP_3021 PF00290 Tryptophan synthase alpha chain AVENP_3022 PF00654 Voltage gated chloride channel AVENP_3023 PF02548 Ketopantoate hydroxymethyltransferase AVENP_3024 PF05491 RuvB C-terminal winged helix domain AVENP_3024 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVENP_3024 PF17864 RuvB AAA lid domain AVENP_3025 PF01594 AI-2E family transporter AVENP_3027 PF09905 DNA-binding protein VF530 AVENP_3040 PF01027 Inhibitor of apoptosis-promoting Bax1 AVENP_3042 PF03840 Preprotein translocase SecG subunit AVENP_3044 PF01765 Ribosome recycling factor AVENP_3045 PF00156 Phosphoribosyl transferase domain AVENP_3047 PF12832 MFS_1 like family AVENP_3048 PF12794 Mechanosensitive ion channel inner membrane domain 1 AVENP_3048 PF12795 Mechanosensitive ion channel porin domain AVENP_3048 PF00924 Mechanosensitive ion channel AVENP_3050 PF01544 CorA-like Mg2+ transporter protein AVENP_3051 PF03883 Peroxide stress protein YaaA AVENP_3052 PF02810 SEC-C motif AVENP_3067 PF05594 Haemagluttinin repeat AVENP_3067 PF13332 Hemagglutinin repeat AVENP_3067 PF05860 haemagglutination activity domain AVENP_3067 PF15526 Novel toxin 21 AVENP_3067 PF04829 Pre-toxin domain with VENN motif AVENP_3067 PF05594 Haemagluttinin repeat AVENP_3067 PF13332 Hemagglutinin repeat AVENP_3067 PF05860 haemagglutination activity domain AVENP_3067 PF15526 Novel toxin 21 AVENP_3067 PF04829 Pre-toxin domain with VENN motif AVENP_3068 PF17287 POTRA domain AVENP_3068 PF08479 POTRA domain, ShlB-type AVENP_3068 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AVENP_3069 PF02472 Biopolymer transport protein ExbD/TolR AVENP_3070 PF01618 MotA/TolQ/ExbB proton channel family AVENP_3071 PF03544 Gram-negative bacterial TonB protein C-terminal AVENP_3074 PF03167 Uracil DNA glycosylase superfamily AVENP_3075 PF00171 Aldehyde dehydrogenase family AVENP_3076 PF00582 Universal stress protein family AVENP_3077 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVENP_3079 PF03480 Bacterial extracellular solute-binding protein, family 7 AVENP_3080 PF00202 Aminotransferase class-III AVENP_3081 PF08448 PAS fold AVENP_3081 PF08447 PAS fold AVENP_3081 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_3082 PF08448 PAS fold AVENP_3082 PF08447 PAS fold AVENP_3082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_3083 PF00486 Transcriptional regulatory protein, C terminal AVENP_3083 PF00072 Response regulator receiver domain AVENP_3084 PF00171 Aldehyde dehydrogenase family AVENP_3085 PF00205 Thiamine pyrophosphate enzyme, central domain AVENP_3085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVENP_3085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVENP_3086 PF04011 LemA family AVENP_3089 PF13419 Haloacid dehalogenase-like hydrolase AVENP_3092 PF07690 Major Facilitator Superfamily AVENP_3093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVENP_3093 PF08447 PAS fold AVENP_3093 PF08448 PAS fold AVENP_3094 PF00486 Transcriptional regulatory protein, C terminal AVENP_3094 PF00072 Response regulator receiver domain AVENP_3095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_3095 PF02203 Tar ligand binding domain homologue AVENP_3095 PF00672 HAMP domain AVENP_3096 PF11849 Domain of unknown function (DUF3369) AVENP_3107 PF00529 HlyD membrane-fusion protein of T1SS AVENP_3107 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVENP_3108 PF00873 AcrB/AcrD/AcrF family AVENP_3109 PF02321 Outer membrane efflux protein AVENP_3109 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AVENP_3113 PF01053 Cys/Met metabolism PLP-dependent enzyme AVENP_3114 PF02082 Transcriptional regulator AVENP_3115 PF00291 Pyridoxal-phosphate dependent enzyme AVENP_3117 PF01507 Phosphoadenosine phosphosulfate reductase family AVENP_3118 PF01507 Phosphoadenosine phosphosulfate reductase family AVENP_3119 PF00009 Elongation factor Tu GTP binding domain AVENP_3120 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVENP_3120 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVENP_3121 PF02347 Glycine cleavage system P-protein AVENP_3122 PF00149 Calcineurin-like phosphoesterase AVENP_3125 PF14403 Circularly permuted ATP-grasp type 2 AVENP_3126 PF08379 Bacterial transglutaminase-like N-terminal region AVENP_3126 PF01841 Transglutaminase-like superfamily AVENP_3127 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVENP_3127 PF02203 Tar ligand binding domain homologue AVENP_3127 PF00672 HAMP domain AVENP_3131 PF14403 Circularly permuted ATP-grasp type 2 AVENP_3133 PF08019 Phosphoethanolamine transferase EptA/EptB AVENP_3133 PF00884 Sulfatase AVENP_3135 PF01219 Prokaryotic diacylglycerol kinase AVENP_3140 PF00486 Transcriptional regulatory protein, C terminal AVENP_3140 PF00072 Response regulator receiver domain AVENP_3142 PF06228 Haem utilisation ChuX/HutX AVENP_3143 PF00664 ABC transporter transmembrane region AVENP_3143 PF00005 ABC transporter AVENP_3145 PF10615 Protein of unknown function (DUF2470) AVENP_3145 PF01243 Pyridoxamine 5'-phosphate oxidase AVENP_3146 PF01497 Periplasmic binding protein AVENP_3147 PF01032 FecCD transport family AVENP_3148 PF00005 ABC transporter AVENP_3149 PF00593 TonB dependent receptor AVENP_3149 PF07715 TonB-dependent Receptor Plug Domain AVENP_3151 PF08241 Methyltransferase domain AVENP_3152 PF11849 Domain of unknown function (DUF3369) AVENP_3153 PF02511 Thymidylate synthase complementing protein AVENP_3154 PF04960 Glutaminase AVENP_3155 PF03458 UPF0126 domain AVENP_3157 PF00551 Formyl transferase AVENP_3157 PF02911 Formyl transferase, C-terminal domain AVENP_3158 PF02075 Crossover junction endodeoxyribonuclease RuvC