DJ013_00005 SM00382 ATPases associated with a variety of cellular activities DJ013_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain DJ013_00055 SM00529 Helix-turn-helix diphteria tox regulatory element DJ013_00055 SM00899 DJ013_00055 DJ013_00235 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ013_00235 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ013_00355 SM00382 ATPases associated with a variety of cellular activities DJ013_00360 SM00842 Cell division protein FtsA DJ013_00395 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_00405 SM00829 Enoylreductase DJ013_00460 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_00475 SM00342 helix_turn_helix, arabinose operon control protein DJ013_00480 SM00829 Enoylreductase DJ013_00535 SM00342 helix_turn_helix, arabinose operon control protein DJ013_00595 SM00850 LytTr DNA-binding domain DJ013_00610 SM00850 LytTr DNA-binding domain DJ013_00645 SM00342 helix_turn_helix, arabinose operon control protein DJ013_00770 SM00382 ATPases associated with a variety of cellular activities DJ013_00850 SM00530 Helix-turn-helix XRE-family like proteins DJ013_00970 SM00382 ATPases associated with a variety of cellular activities DJ013_01015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ013_01015 SM00091 PAS domain DJ013_01015 SM00387 Histidine kinase-like ATPases DJ013_01015 SM00388 His Kinase A (phosphoacceptor) domain DJ013_01015 SM00448 cheY-homologous receiver domain DJ013_01020 SM00448 cheY-homologous receiver domain DJ013_01045 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_01055 SM00830 Chorismate mutase type II DJ013_01070 SM00257 Lysin motif DJ013_01075 SM01001 AIR carboxylase DJ013_01095 SM00530 Helix-turn-helix XRE-family like proteins DJ013_01110 SM00822 DJ013_01110 DJ013_01155 SM00434 DNA Topoisomerase IV DJ013_01160 SM00028 Tetratricopeptide repeats DJ013_01175 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ013_01205 SM00028 Tetratricopeptide repeats DJ013_01220 SM00028 Tetratricopeptide repeats DJ013_01245 SM00316 Ribosomal protein S1-like RNA-binding domain DJ013_01245 SM00322 K homology RNA-binding domain DJ013_01250 SM01387 DJ013_01250 DJ013_01355 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_01545 SM00450 Rhodanese Homology Domain DJ013_01550 SM00849 Metallo-beta-lactamase superfamily DJ013_01560 SM00028 Tetratricopeptide repeats DJ013_01575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ013_01575 SM00387 Histidine kinase-like ATPases DJ013_01575 SM00388 His Kinase A (phosphoacceptor) domain DJ013_01585 SM00342 helix_turn_helix, arabinose operon control protein DJ013_01600 SM00271 DnaJ molecular chaperone homology domain DJ013_01625 SM00450 Rhodanese Homology Domain DJ013_01700 SM00850 LytTr DNA-binding domain DJ013_01710 SM00448 cheY-homologous receiver domain DJ013_01710 SM00850 LytTr DNA-binding domain DJ013_01715 SM00028 Tetratricopeptide repeats DJ013_01715 SM00387 Histidine kinase-like ATPases DJ013_01765 SM00382 ATPases associated with a variety of cellular activities DJ013_01805 SM00327 von Willebrand factor (vWF) type A domain DJ013_01810 SM00387 Histidine kinase-like ATPases DJ013_01810 SM00388 His Kinase A (phosphoacceptor) domain DJ013_01830 SM00387 Histidine kinase-like ATPases DJ013_01830 SM00388 His Kinase A (phosphoacceptor) domain DJ013_01835 SM00387 Histidine kinase-like ATPases DJ013_01835 SM00388 His Kinase A (phosphoacceptor) domain DJ013_01840 SM00448 cheY-homologous receiver domain DJ013_01845 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain DJ013_01845 SM00448 cheY-homologous receiver domain DJ013_01860 SM00419 helix_turn_helix, cAMP Regulatory protein DJ013_01895 SM00344 helix_turn_helix ASNC type DJ013_01900 SM01018 B12 binding domain DJ013_01905 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_01915 SM01321 DJ013_01915 DJ013_01945 SM00316 Ribosomal protein S1-like RNA-binding domain DJ013_01945 SM00732 Likely ribonuclease with RNase H fold. DJ013_01990 SM01230 DJ013_01990 DJ013_01995 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_02060 SM01130 DJ013_02060 DJ013_02120 SM00028 Tetratricopeptide repeats DJ013_02140 SM00530 Helix-turn-helix XRE-family like proteins DJ013_02175 SM00917 LeuA allosteric (dimerisation) domain DJ013_02330 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DJ013_02330 SM00474 3'-5' exonuclease DJ013_02330 SM00475 5'-3' exonuclease DJ013_02330 SM00482 DNA polymerase A domain DJ013_02395 SM00342 helix_turn_helix, arabinose operon control protein DJ013_02470 SM00487 DEAD-like helicases superfamily DJ013_02470 SM00490 helicase superfamily c-terminal domain DJ013_02520 SM00850 LytTr DNA-binding domain DJ013_02560 SM00342 helix_turn_helix, arabinose operon control protein DJ013_02560 SM00387 Histidine kinase-like ATPases DJ013_02560 SM00388 His Kinase A (phosphoacceptor) domain DJ013_02560 SM00448 cheY-homologous receiver domain DJ013_02580 SM00710 Parallel beta-helix repeats DJ013_02585 SM00382 ATPases associated with a variety of cellular activities DJ013_02605 SM00710 Parallel beta-helix repeats DJ013_02615 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_02620 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ013_02620 SM00895 DJ013_02620 DJ013_02675 SM00479 DJ013_02675 DJ013_02700 SM00506 Appr-1"-p processing enzyme DJ013_02885 SM00481 DNA polymerase alpha chain like domain DJ013_02900 SM00060 Fibronectin type 3 domain DJ013_02900 SM00776 DJ013_02900 DJ013_02925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ013_02925 SM00388 His Kinase A (phosphoacceptor) domain DJ013_02930 SM00529 Helix-turn-helix diphteria tox regulatory element DJ013_02930 SM00899 DJ013_02930 DJ013_02955 SM00642 Alpha-amylase domain DJ013_03000 SM00327 von Willebrand factor (vWF) type A domain DJ013_03040 SM00257 Lysin motif DJ013_03050 SM00641 Glycosyl hydrolases family 25 DJ013_03060 SM00382 ATPases associated with a variety of cellular activities DJ013_03120 SM00382 ATPases associated with a variety of cellular activities DJ013_03175 SM00852 Probable molybdopterin binding domain DJ013_03225 SM00450 Rhodanese Homology Domain DJ013_03225 SM00849 Metallo-beta-lactamase superfamily DJ013_03280 SM00919 Malic enzyme, NAD binding domain DJ013_03280 SM01274 DJ013_03280 DJ013_03295 SM00257 Lysin motif DJ013_03350 SM00028 Tetratricopeptide repeats DJ013_03370 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ013_03370 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ013_03375 SM00344 helix_turn_helix ASNC type DJ013_03395 SM00740 DJ013_03395 DJ013_03400 SM00450 Rhodanese Homology Domain DJ013_03410 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ013_03410 SM00924 MgtE intracellular N domain DJ013_03425 SM00938 Nitrogen regulatory protein P-II DJ013_03575 SM01321 DJ013_03575 DJ013_03625 SM00530 Helix-turn-helix XRE-family like proteins DJ013_03650 SM00986 Uracil DNA glycosylase superfamily DJ013_03650 SM00987 UreE urease accessory protein, C-terminal domain DJ013_03670 SM00470 ParB-like nuclease domain DJ013_03710 SM00382 ATPases associated with a variety of cellular activities DJ013_03720 SM00448 cheY-homologous receiver domain DJ013_03730 SM00257 Lysin motif DJ013_03750 SM00563 Phosphate acyltransferases DJ013_03775 SM00904 Riboflavin kinase DJ013_03790 SM00830 Chorismate mutase type II DJ013_03800 SM00387 Histidine kinase-like ATPases DJ013_03800 SM00433 TopoisomeraseII DJ013_03820 SM00382 ATPases associated with a variety of cellular activities DJ013_03850 SM00342 helix_turn_helix, arabinose operon control protein DJ013_03920 SM00477 DNA/RNA non-specific endonuclease DJ013_03920 SM00892 DNA/RNA non-specific endonuclease DJ013_03925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ013_03955 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_04030 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. DJ013_04050 SM00360 RNA recognition motif DJ013_04060 SM00244 prohibitin homologues DJ013_04110 SM00382 ATPases associated with a variety of cellular activities DJ013_04145 SM00465 GIY-YIG type nucleases (URI domain) DJ013_04200 SM01323 DJ013_04200 DJ013_04255 SM00342 helix_turn_helix, arabinose operon control protein DJ013_04315 SM00382 ATPases associated with a variety of cellular activities DJ013_04405 SM00450 Rhodanese Homology Domain DJ013_04425 SM00487 DEAD-like helicases superfamily DJ013_04425 SM00490 helicase superfamily c-terminal domain DJ013_04440 SM00382 ATPases associated with a variety of cellular activities DJ013_04480 SM00342 helix_turn_helix, arabinose operon control protein DJ013_04495 SM00421 helix_turn_helix, Lux Regulon DJ013_04505 SM00984 UDP binding domain DJ013_04585 SM00287 Bacterial SH3 domain homologues DJ013_04615 SM01144 DJ013_04615 DJ013_04680 SM00829 Enoylreductase DJ013_04695 SM00530 Helix-turn-helix XRE-family like proteins DJ013_04750 SM01321 DJ013_04750 DJ013_04780 SM00448 cheY-homologous receiver domain DJ013_04790 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ013_04790 SM00387 Histidine kinase-like ATPases DJ013_04790 SM00388 His Kinase A (phosphoacceptor) domain DJ013_04860 SM00845 GatB domain DJ013_04880 SM01011 Aminopeptidase P, N-terminal domain DJ013_04900 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ013_04940 SM00850 LytTr DNA-binding domain DJ013_04950 SM00421 helix_turn_helix, Lux Regulon DJ013_04950 SM00448 cheY-homologous receiver domain DJ013_05000 SM00822 DJ013_05000 DJ013_05075 SM00322 K homology RNA-binding domain DJ013_05075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ013_05090 SM00873 B3/4 domain DJ013_05090 SM00874 tRNA synthetase B5 domain DJ013_05090 SM00896 Ferredoxin-fold anticodon binding domain DJ013_05100 SM00382 ATPases associated with a variety of cellular activities DJ013_05270 SM01117 DJ013_05270 DJ013_05305 SM00861 Transketolase, pyrimidine binding domain DJ013_05335 SM00014 Acid phosphatase homologues DJ013_05365 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ013_05365 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ013_05365 SM00493 DJ013_05365 DJ013_05375 SM01400 DJ013_05375 DJ013_05420 SM00354 helix_turn _helix lactose operon repressor DJ013_05425 SM00342 helix_turn_helix, arabinose operon control protein DJ013_05425 SM00387 Histidine kinase-like ATPases DJ013_05425 SM00388 His Kinase A (phosphoacceptor) domain DJ013_05425 SM00448 cheY-homologous receiver domain DJ013_05430 SM00633 Glycosyl hydrolase family 10 DJ013_05500 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ013_05500 SM00710 Parallel beta-helix repeats DJ013_05505 SM00812 Alpha-L-fucosidase DJ013_05525 SM00710 Parallel beta-helix repeats DJ013_05550 SM00710 Parallel beta-helix repeats DJ013_05690 SM00028 Tetratricopeptide repeats DJ013_05715 SM00850 LytTr DNA-binding domain DJ013_05765 SM00487 DEAD-like helicases superfamily DJ013_05800 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_05805 SM00481 DNA polymerase alpha chain like domain DJ013_05840 SM00858 DJ013_05840 DJ013_05870 SM00886 Stress responsive A/B Barrel Domain DJ013_05945 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ013_05960 SM00935 Outer membrane protein (OmpH-like) DJ013_05975 SM00450 Rhodanese Homology Domain DJ013_05995 SM00840 DJ013_05995 DJ013_06000 SM00646 DJ013_06000 DJ013_06040 SM00028 Tetratricopeptide repeats DJ013_06090 SM00752 Horizontally Transferred TransMembrane Domain DJ013_06105 SM00382 ATPases associated with a variety of cellular activities DJ013_06130 SM00245 tail specific protease DJ013_06145 SM00900 DJ013_06145 DJ013_06175 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ013_06180 SM00855 Phosphoglycerate mutase family DJ013_06220 SM00341 Helicase and RNase D C-terminal DJ013_06220 SM00487 DEAD-like helicases superfamily DJ013_06220 SM00490 helicase superfamily c-terminal domain DJ013_06220 SM00956 DJ013_06220 DJ013_06225 SM00481 DNA polymerase alpha chain like domain DJ013_06250 SM00344 helix_turn_helix ASNC type DJ013_06275 SM00093 SERine Proteinase INhibitors DJ013_06285 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ013_06285 SM01240 DJ013_06285 DJ013_06350 SM00387 Histidine kinase-like ATPases DJ013_06375 SM00382 ATPases associated with a variety of cellular activities DJ013_06375 SM00962 SRP54-type protein, GTPase domain DJ013_06375 SM00963 SRP54-type protein, helical bundle domain DJ013_06405 SM00448 cheY-homologous receiver domain DJ013_06405 SM00850 LytTr DNA-binding domain DJ013_06435 SM00788 Adenylosuccinate synthetase DJ013_06450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ013_06450 SM00954 Region found in RelA / SpoT proteins DJ013_06470 SM00382 ATPases associated with a variety of cellular activities DJ013_06470 SM00994 ClpX C4-type zinc finger DJ013_06470 SM01086 C-terminal, D2-small domain, of ClpB protein DJ013_06495 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_06565 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_06715 SM00382 ATPases associated with a variety of cellular activities DJ013_06800 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ013_06825 SM00850 LytTr DNA-binding domain DJ013_06845 SM00421 helix_turn_helix, Lux Regulon DJ013_06845 SM00448 cheY-homologous receiver domain DJ013_06850 SM00387 Histidine kinase-like ATPases DJ013_06890 SM00387 Histidine kinase-like ATPases DJ013_06895 SM00421 helix_turn_helix, Lux Regulon DJ013_06895 SM00448 cheY-homologous receiver domain DJ013_06930 SM00849 Metallo-beta-lactamase superfamily DJ013_06940 SM00387 Histidine kinase-like ATPases DJ013_06940 SM00388 His Kinase A (phosphoacceptor) domain DJ013_07010 SM00382 ATPases associated with a variety of cellular activities DJ013_07015 SM00470 ParB-like nuclease domain DJ013_07035 SM00448 cheY-homologous receiver domain DJ013_07040 SM00387 Histidine kinase-like ATPases DJ013_07040 SM00388 His Kinase A (phosphoacceptor) domain DJ013_07050 SM00382 ATPases associated with a variety of cellular activities DJ013_07050 SM00448 cheY-homologous receiver domain DJ013_07055 SM00387 Histidine kinase-like ATPases DJ013_07055 SM00388 His Kinase A (phosphoacceptor) domain DJ013_07060 SM00091 PAS domain DJ013_07060 SM00387 Histidine kinase-like ATPases DJ013_07060 SM00388 His Kinase A (phosphoacceptor) domain DJ013_07060 SM00448 cheY-homologous receiver domain DJ013_07085 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ013_07175 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ013_07180 SM00341 Helicase and RNase D C-terminal DJ013_07180 SM00487 DEAD-like helicases superfamily DJ013_07180 SM00490 helicase superfamily c-terminal domain DJ013_07180 SM00956 DJ013_07180 DJ013_07245 SM00342 helix_turn_helix, arabinose operon control protein DJ013_07295 SM00822 DJ013_07295 DJ013_07330 SM00487 DEAD-like helicases superfamily DJ013_07330 SM00490 helicase superfamily c-terminal domain DJ013_07340 SM00612 DJ013_07340 DJ013_07370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ013_07370 SM00387 Histidine kinase-like ATPases DJ013_07370 SM00388 His Kinase A (phosphoacceptor) domain DJ013_07375 SM00448 cheY-homologous receiver domain DJ013_07465 SM00421 helix_turn_helix, Lux Regulon DJ013_07475 SM00042 Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. DJ013_07530 SM00382 ATPases associated with a variety of cellular activities DJ013_07530 SM01086 C-terminal, D2-small domain, of ClpB protein DJ013_07535 SM00342 helix_turn_helix, arabinose operon control protein DJ013_07535 SM00387 Histidine kinase-like ATPases DJ013_07535 SM00388 His Kinase A (phosphoacceptor) domain DJ013_07535 SM00448 cheY-homologous receiver domain DJ013_07540 SM00850 LytTr DNA-binding domain DJ013_07545 SM00421 helix_turn_helix, Lux Regulon DJ013_07585 SM00984 UDP binding domain DJ013_07795 SM00448 cheY-homologous receiver domain DJ013_07795 SM00850 LytTr DNA-binding domain DJ013_07800 SM01403 DJ013_07800 DJ013_07840 SM00357 Cold shock protein domain DJ013_07840 SM00382 ATPases associated with a variety of cellular activities DJ013_07875 SM00060 Fibronectin type 3 domain DJ013_07945 SM00257 Lysin motif DJ013_07965 SM00245 tail specific protease DJ013_07970 SM00382 ATPases associated with a variety of cellular activities DJ013_07970 SM00464 Found in ATP-dependent protease La (LON) DJ013_07995 SM00850 LytTr DNA-binding domain DJ013_08000 SM00448 cheY-homologous receiver domain DJ013_08000 SM00850 LytTr DNA-binding domain DJ013_08025 SM00400 zinc finger DJ013_08025 SM00493 DJ013_08025 DJ013_08050 SM00478 endonuclease III DJ013_08050 SM00525 DJ013_08050 DJ013_08055 SM00411 bacterial (prokaryotic) histone like domain DJ013_08060 SM00028 Tetratricopeptide repeats DJ013_08065 SM00316 Ribosomal protein S1-like RNA-binding domain DJ013_08135 SM00191 Integrin alpha (beta-propellor repeats). DJ013_08170 SM00861 Transketolase, pyrimidine binding domain DJ013_08210 SM00867 YceI-like domain DJ013_08235 SM00448 cheY-homologous receiver domain DJ013_08235 SM00850 LytTr DNA-binding domain DJ013_08250 SM00636 DJ013_08250 DJ013_08275 SM00836 DALR anticodon binding domain DJ013_08275 SM01016 Arginyl tRNA synthetase N terminal dom DJ013_08355 SM00100 Cyclic nucleotide-monophosphate binding domain DJ013_08395 SM00893 Electron transfer flavoprotein domain DJ013_08400 SM00893 Electron transfer flavoprotein domain DJ013_08410 SM00870 DJ013_08410 DJ013_08430 SM00829 Enoylreductase DJ013_08465 SM00342 helix_turn_helix, arabinose operon control protein DJ013_08465 SM00387 Histidine kinase-like ATPases DJ013_08465 SM00388 His Kinase A (phosphoacceptor) domain DJ013_08465 SM00448 cheY-homologous receiver domain DJ013_08470 SM00342 helix_turn_helix, arabinose operon control protein DJ013_08470 SM00387 Histidine kinase-like ATPases DJ013_08470 SM00388 His Kinase A (phosphoacceptor) domain DJ013_08470 SM00448 cheY-homologous receiver domain DJ013_08475 SM00850 LytTr DNA-binding domain DJ013_08480 SM00710 Parallel beta-helix repeats DJ013_08555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ013_08580 SM00014 Acid phosphatase homologues DJ013_08585 SM01130 DJ013_08585 DJ013_08605 SM00292 breast cancer carboxy-terminal domain DJ013_08605 SM00532 Ligase N family DJ013_08610 SM00850 LytTr DNA-binding domain DJ013_08615 SM00850 LytTr DNA-binding domain DJ013_08690 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_08705 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ013_08735 SM01321 DJ013_08735 DJ013_08765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ013_08825 SM00342 helix_turn_helix, arabinose operon control protein DJ013_08860 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ013_08900 SM00387 Histidine kinase-like ATPases DJ013_08905 SM00421 helix_turn_helix, Lux Regulon DJ013_08905 SM00448 cheY-homologous receiver domain DJ013_08925 SM00342 helix_turn_helix, arabinose operon control protein DJ013_08925 SM00387 Histidine kinase-like ATPases DJ013_08925 SM00388 His Kinase A (phosphoacceptor) domain DJ013_08925 SM00448 cheY-homologous receiver domain DJ013_08930 SM00850 LytTr DNA-binding domain DJ013_08935 SM00710 Parallel beta-helix repeats DJ013_08940 SM00850 LytTr DNA-binding domain DJ013_08945 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_08975 SM00342 helix_turn_helix, arabinose operon control protein DJ013_09060 SM00899 DJ013_09060 DJ013_09070 SM01038 Beta galactosidase small chain DJ013_09080 SM00354 helix_turn _helix lactose operon repressor DJ013_09170 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ013_09200 SM00382 ATPases associated with a variety of cellular activities DJ013_09275 SM00257 Lysin motif DJ013_09290 SM00344 helix_turn_helix ASNC type DJ013_09305 SM00382 ATPases associated with a variety of cellular activities DJ013_09355 SM00028 Tetratricopeptide repeats DJ013_09405 SM00342 helix_turn_helix, arabinose operon control protein DJ013_09435 SM00812 Alpha-L-fucosidase DJ013_09450 SM00342 helix_turn_helix, arabinose operon control protein DJ013_09485 SM00354 helix_turn _helix lactose operon repressor DJ013_09500 SM00710 Parallel beta-helix repeats DJ013_09660 SM00382 ATPases associated with a variety of cellular activities DJ013_09660 SM01086 C-terminal, D2-small domain, of ClpB protein DJ013_09685 SM00382 ATPases associated with a variety of cellular activities DJ013_09730 SM00861 Transketolase, pyrimidine binding domain DJ013_09770 SM00564 beta-propeller repeat DJ013_09775 SM00100 Cyclic nucleotide-monophosphate binding domain DJ013_09810 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_09835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ013_09860 SM00919 Malic enzyme, NAD binding domain DJ013_09860 SM01274 DJ013_09860 DJ013_09985 SM00901 DJ013_09985 DJ013_10005 SM00487 DEAD-like helicases superfamily DJ013_10145 SM00342 helix_turn_helix, arabinose operon control protein DJ013_10240 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_10265 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ013_10265 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ013_10335 SM00342 helix_turn_helix, arabinose operon control protein DJ013_10335 SM00387 Histidine kinase-like ATPases DJ013_10335 SM00388 His Kinase A (phosphoacceptor) domain DJ013_10335 SM00448 cheY-homologous receiver domain DJ013_10380 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_10395 SM00977 TilS substrate C-terminal domain DJ013_10415 SM01409 DJ013_10415 DJ013_10425 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ013_10430 SM00028 Tetratricopeptide repeats DJ013_10450 SM00478 endonuclease III DJ013_10450 SM00525 DJ013_10450 DJ013_10465 SM00448 cheY-homologous receiver domain DJ013_10465 SM00850 LytTr DNA-binding domain DJ013_10515 SM00947 Carbonic anhydrase DJ013_10535 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ013_10540 SM00829 Enoylreductase DJ013_10580 SM01350 DJ013_10580 DJ013_10680 SM00642 Alpha-amylase domain DJ013_10695 SM00981 DJ013_10695 DJ013_10700 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DJ013_10710 SM00662 RNA polymerases D DJ013_10715 SM00363 S4 RNA-binding domain DJ013_10715 SM01390 DJ013_10715 DJ013_10735 SM00316 Ribosomal protein S1-like RNA-binding domain DJ013_10790 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DJ013_10795 SM01374 DJ013_10795 DJ013_10815 SM00322 K homology RNA-binding domain DJ013_10830 SM01382 DJ013_10830 DJ013_10830 SM01383 DJ013_10830 DJ013_10880 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ013_10880 SM00481 DNA polymerase alpha chain like domain DJ013_10900 SM00487 DEAD-like helicases superfamily DJ013_10900 SM00490 helicase superfamily c-terminal domain DJ013_10940 SM00382 ATPases associated with a variety of cellular activities DJ013_10960 SM00563 Phosphate acyltransferases DJ013_10980 SM00849 Metallo-beta-lactamase superfamily DJ013_10980 SM01027 Beta-Casp domain DJ013_11005 SM00226 Low molecular weight phosphatase family DJ013_11015 SM01192 DJ013_11015 DJ013_11015 SM01193 DJ013_11015 DJ013_11020 SM00450 Rhodanese Homology Domain DJ013_11025 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ013_11100 SM00382 ATPases associated with a variety of cellular activities DJ013_11115 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_11120 SM00382 ATPases associated with a variety of cellular activities DJ013_11140 SM00883 Chaperonin 10 Kd subunit DJ013_11185 SM00028 Tetratricopeptide repeats DJ013_11190 SM00448 cheY-homologous receiver domain DJ013_11190 SM00850 LytTr DNA-binding domain DJ013_11225 SM00947 Carbonic anhydrase DJ013_11260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ013_11295 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. DJ013_11305 SM00342 helix_turn_helix, arabinose operon control protein DJ013_11305 SM00387 Histidine kinase-like ATPases DJ013_11305 SM00388 His Kinase A (phosphoacceptor) domain DJ013_11305 SM00448 cheY-homologous receiver domain DJ013_11315 SM00710 Parallel beta-helix repeats DJ013_11520 SM00850 LytTr DNA-binding domain DJ013_11550 SM00530 Helix-turn-helix XRE-family like proteins DJ013_11620 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ013_11695 SM00382 ATPases associated with a variety of cellular activities DJ013_11730 SM00487 DEAD-like helicases superfamily DJ013_11730 SM00490 helicase superfamily c-terminal domain DJ013_11775 SM00867 YceI-like domain DJ013_11820 SM00567 E-Z type HEAT repeats DJ013_11835 SM00867 YceI-like domain DJ013_11895 SM00342 helix_turn_helix, arabinose operon control protein DJ013_11965 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_11975 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ013_11990 SM00342 helix_turn_helix, arabinose operon control protein DJ013_11990 SM00387 Histidine kinase-like ATPases DJ013_11990 SM00388 His Kinase A (phosphoacceptor) domain DJ013_11990 SM00448 cheY-homologous receiver domain DJ013_12010 SM00363 S4 RNA-binding domain DJ013_12025 SM00382 ATPases associated with a variety of cellular activities DJ013_12025 SM01086 C-terminal, D2-small domain, of ClpB protein DJ013_12040 SM00042 Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. DJ013_12040 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_12040 SM00409 Immunoglobulin DJ013_12070 SM00530 Helix-turn-helix XRE-family like proteins DJ013_12100 SM00382 ATPases associated with a variety of cellular activities DJ013_12160 SM00487 DEAD-like helicases superfamily DJ013_12160 SM00490 helicase superfamily c-terminal domain DJ013_12170 SM00849 Metallo-beta-lactamase superfamily DJ013_12220 SM00382 ATPases associated with a variety of cellular activities DJ013_12235 SM00710 Parallel beta-helix repeats DJ013_12240 SM00850 LytTr DNA-binding domain DJ013_12245 SM00421 helix_turn_helix, Lux Regulon DJ013_12280 SM00046 Diacylglycerol kinase catalytic domain (presumed) DJ013_12360 SM00382 ATPases associated with a variety of cellular activities DJ013_12365 SM00850 LytTr DNA-binding domain DJ013_12385 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DJ013_12435 SM00448 cheY-homologous receiver domain DJ013_12435 SM00862 Transcriptional regulatory protein, C terminal DJ013_12440 SM00387 Histidine kinase-like ATPases DJ013_12440 SM00388 His Kinase A (phosphoacceptor) domain DJ013_12485 SM00935 Outer membrane protein (OmpH-like) DJ013_12490 SM00935 Outer membrane protein (OmpH-like) DJ013_12525 SM00342 helix_turn_helix, arabinose operon control protein DJ013_12555 SM00342 helix_turn_helix, arabinose operon control protein DJ013_12560 SM01211 DJ013_12560 DJ013_12595 SM00448 cheY-homologous receiver domain DJ013_12595 SM00862 Transcriptional regulatory protein, C terminal DJ013_12600 SM00387 Histidine kinase-like ATPases DJ013_12600 SM00388 His Kinase A (phosphoacceptor) domain DJ013_12650 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ013_12650 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ013_12670 SM00382 ATPases associated with a variety of cellular activities DJ013_12690 SM00855 Phosphoglycerate mutase family DJ013_12700 SM00448 cheY-homologous receiver domain DJ013_12700 SM00850 LytTr DNA-binding domain DJ013_12730 SM00487 DEAD-like helicases superfamily DJ013_12730 SM00490 helicase superfamily c-terminal domain DJ013_12745 SM01091 Transporter associated domain DJ013_12815 SM00829 Enoylreductase DJ013_12870 SM00244 prohibitin homologues DJ013_12875 SM00363 S4 RNA-binding domain DJ013_12895 SM00881 CoA binding domain DJ013_12900 SM00422 helix_turn_helix, mercury resistance DJ013_12975 SM00850 LytTr DNA-binding domain DJ013_12985 SM00850 LytTr DNA-binding domain DJ013_13000 SM01060 DJ013_13000 DJ013_13005 SM00248 ankyrin repeats DJ013_13015 SM00851 MGS-like domain DJ013_13055 SM00867 YceI-like domain DJ013_13080 SM01234 DJ013_13080 DJ013_13165 SM01130 DJ013_13165 DJ013_13175 SM00829 Enoylreductase DJ013_13180 SM00463 Small MutS-related domain DJ013_13180 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ013_13180 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ013_13275 SM01240 DJ013_13275 DJ013_13295 SM00990 DJ013_13295 DJ013_13310 SM00448 cheY-homologous receiver domain DJ013_13325 SM00387 Histidine kinase-like ATPases DJ013_13325 SM00388 His Kinase A (phosphoacceptor) domain DJ013_13325 SM00448 cheY-homologous receiver domain DJ013_13330 SM00897 FIST N domain DJ013_13330 SM01204 DJ013_13330 DJ013_13335 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ013_13335 SM00091 PAS domain DJ013_13335 SM00387 Histidine kinase-like ATPases DJ013_13335 SM00388 His Kinase A (phosphoacceptor) domain DJ013_13335 SM00448 cheY-homologous receiver domain DJ013_13345 SM00028 Tetratricopeptide repeats DJ013_13355 SM00448 cheY-homologous receiver domain DJ013_13415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ013_13415 SM00245 tail specific protease DJ013_13465 SM00320 WD40 repeats DJ013_13475 SM00905 Dihydroneopterin aldolase DJ013_13490 SM01005 Alanine racemase, C-terminal domain DJ013_13495 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ013_13540 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_13560 SM00450 Rhodanese Homology Domain DJ013_13575 SM00953 DJ013_13575 DJ013_13650 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DJ013_13675 SM00563 Phosphate acyltransferases DJ013_13710 SM00825 Beta-ketoacyl synthase DJ013_13725 SM00825 Beta-ketoacyl synthase DJ013_13750 SM00825 Beta-ketoacyl synthase DJ013_13760 SM00822 DJ013_13760 DJ013_13810 SM00028 Tetratricopeptide repeats DJ013_13885 SM00098 Alkaline phosphatase homologues DJ013_13890 SM00098 Alkaline phosphatase homologues DJ013_13950 SM00878 Biotin carboxylase C-terminal domain DJ013_13960 SM00841 Elongation factor P, C-terminal DJ013_13960 SM01185 DJ013_13960 DJ013_13995 SM00072 Guanylate kinase homologues. DJ013_14015 SM00363 S4 RNA-binding domain DJ013_14050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ013_14070 SM00409 Immunoglobulin DJ013_14100 SM00646 DJ013_14100 DJ013_14130 SM00316 Ribosomal protein S1-like RNA-binding domain DJ013_14165 SM00344 helix_turn_helix ASNC type DJ013_14175 SM00450 Rhodanese Homology Domain DJ013_14390 SM00886 Stress responsive A/B Barrel Domain DJ013_14405 SM00342 helix_turn_helix, arabinose operon control protein DJ013_14425 SM00612 DJ013_14425 DJ013_14430 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ013_14430 SM00895 DJ013_14430 DJ013_14440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_14460 SM00564 beta-propeller repeat DJ013_14470 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_14475 SM00354 helix_turn _helix lactose operon repressor DJ013_14480 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_14565 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DJ013_14565 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DJ013_14570 SM00649 Ribosomal protein L11/L12 DJ013_14595 SM00663 RNA polymerase I subunit A N-terminus DJ013_14640 SM00640 Glycosyl hydrolases family 32 DJ013_14655 SM00028 Tetratricopeptide repeats DJ013_14660 SM01217 DJ013_14660 DJ013_14665 SM00871 Bacterial transcription activator, effector binding domain DJ013_14680 SM00342 helix_turn_helix, arabinose operon control protein DJ013_14695 SM00382 ATPases associated with a variety of cellular activities DJ013_14700 SM00382 ATPases associated with a variety of cellular activities DJ013_14795 SM00838 Elongation factor G C-terminus DJ013_14840 SM00387 Histidine kinase-like ATPases DJ013_14840 SM00433 TopoisomeraseII DJ013_14855 SM00710 Parallel beta-helix repeats DJ013_14890 SM00710 Parallel beta-helix repeats DJ013_14985 SM00642 Alpha-amylase domain DJ013_15025 SM00850 LytTr DNA-binding domain DJ013_15030 SM00028 Tetratricopeptide repeats DJ013_15035 SM00191 Integrin alpha (beta-propellor repeats). DJ013_15055 SM00850 LytTr DNA-binding domain DJ013_15060 SM00448 cheY-homologous receiver domain DJ013_15060 SM00850 LytTr DNA-binding domain DJ013_15070 SM00382 ATPases associated with a variety of cellular activities DJ013_15135 SM00382 ATPases associated with a variety of cellular activities DJ013_15190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ013_15190 SM00091 PAS domain DJ013_15195 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DJ013_15205 SM00957 SecA DEAD-like domain DJ013_15205 SM00958 SecA preprotein cross-linking domain DJ013_15250 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain DJ013_15260 SM00843 DJ013_15260 DJ013_15280 SM00825 Beta-ketoacyl synthase DJ013_15285 SM00358 Double-stranded RNA binding motif DJ013_15285 SM00535 Ribonuclease III family DJ013_15345 SM00479 DJ013_15345 DJ013_15350 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_15500 SM00382 ATPases associated with a variety of cellular activities DJ013_15505 SM00421 helix_turn_helix, Lux Regulon DJ013_15505 SM00448 cheY-homologous receiver domain DJ013_15540 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_15555 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ013_15555 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ013_15595 SM00271 DnaJ molecular chaperone homology domain DJ013_15600 SM00850 LytTr DNA-binding domain DJ013_15645 SM00448 cheY-homologous receiver domain DJ013_15645 SM00850 LytTr DNA-binding domain DJ013_15655 SM00421 helix_turn_helix, Lux Regulon DJ013_15655 SM00448 cheY-homologous receiver domain DJ013_15680 SM00631 DJ013_15680 DJ013_15710 SM01007 Class II Aldolase and Adducin N-terminal domain DJ013_15720 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_15730 SM00421 helix_turn_helix, Lux Regulon DJ013_15730 SM00448 cheY-homologous receiver domain DJ013_15735 SM00387 Histidine kinase-like ATPases DJ013_15755 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ013_15790 SM00248 ankyrin repeats DJ013_15835 SM00382 ATPases associated with a variety of cellular activities DJ013_16025 SM00354 helix_turn _helix lactose operon repressor DJ013_16080 SM00853 MutL C terminal dimerisation domain DJ013_16080 SM01340 DJ013_16080 DJ013_16085 SM01160 DJ013_16085 DJ013_16095 SM00861 Transketolase, pyrimidine binding domain DJ013_16100 SM00382 ATPases associated with a variety of cellular activities DJ013_16185 SM00387 Histidine kinase-like ATPases DJ013_16190 SM00448 cheY-homologous receiver domain DJ013_16190 SM00850 LytTr DNA-binding domain DJ013_16195 SM00710 Parallel beta-helix repeats DJ013_16200 SM00850 LytTr DNA-binding domain DJ013_16215 SM00382 ATPases associated with a variety of cellular activities DJ013_16250 SM00871 Bacterial transcription activator, effector binding domain DJ013_16270 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_16285 SM00487 DEAD-like helicases superfamily DJ013_16285 SM00490 helicase superfamily c-terminal domain DJ013_16305 SM00382 ATPases associated with a variety of cellular activities DJ013_16330 SM00563 Phosphate acyltransferases DJ013_16360 SM00342 helix_turn_helix, arabinose operon control protein DJ013_16410 SM00878 Biotin carboxylase C-terminal domain DJ013_16460 SM00829 Enoylreductase DJ013_16470 SM00342 helix_turn_helix, arabinose operon control protein DJ013_16490 SM00564 beta-propeller repeat DJ013_16540 SM00487 DEAD-like helicases superfamily DJ013_16540 SM00490 helicase superfamily c-terminal domain DJ013_16545 SM00028 Tetratricopeptide repeats DJ013_16555 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ013_16555 SM01134 DJ013_16555 DJ013_16565 SM00421 helix_turn_helix, Lux Regulon DJ013_16565 SM00448 cheY-homologous receiver domain DJ013_16570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ013_16570 SM00387 Histidine kinase-like ATPases DJ013_16580 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_16625 SM00357 Cold shock protein domain DJ013_16630 SM00480 DNA polymerase III beta subunit DJ013_16655 SM00937 DJ013_16655 DJ013_16695 SM00852 Probable molybdopterin binding domain DJ013_16715 SM00028 Tetratricopeptide repeats DJ013_16750 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ013_16835 SM00487 DEAD-like helicases superfamily DJ013_16835 SM00490 helicase superfamily c-terminal domain DJ013_16835 SM00982 DJ013_16835 DJ013_16835 SM01058 CarD-like/TRCF domain DJ013_16865 SM01228 DJ013_16865 DJ013_16880 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. DJ013_16900 SM01329 DJ013_16900 DJ013_16905 SM00917 LeuA allosteric (dimerisation) domain DJ013_16935 SM00563 Phosphate acyltransferases DJ013_16985 SM00316 Ribosomal protein S1-like RNA-binding domain DJ013_16985 SM00357 Cold shock protein domain DJ013_16985 SM00955 DJ013_16985 DJ013_17020 SM00382 ATPases associated with a variety of cellular activities DJ013_17075 SM00382 ATPases associated with a variety of cellular activities DJ013_17085 SM00822 DJ013_17085 DJ013_17095 SM00342 helix_turn_helix, arabinose operon control protein DJ013_17120 SM00028 Tetratricopeptide repeats DJ013_17130 SM00710 Parallel beta-helix repeats DJ013_17145 SM00387 Histidine kinase-like ATPases DJ013_17145 SM00388 His Kinase A (phosphoacceptor) domain DJ013_17150 SM00448 cheY-homologous receiver domain DJ013_17150 SM00862 Transcriptional regulatory protein, C terminal DJ013_17185 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ013_17225 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_17235 SM00732 Likely ribonuclease with RNase H fold. DJ013_17240 SM00562 DJ013_17240 DJ013_17270 SM00382 ATPases associated with a variety of cellular activities DJ013_17300 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_17305 SM00382 ATPases associated with a variety of cellular activities DJ013_17315 SM01207 DJ013_17315 DJ013_17330 SM00327 von Willebrand factor (vWF) type A domain DJ013_17335 SM00984 UDP binding domain DJ013_17520 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ013_17600 SM00245 tail specific protease DJ013_17695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ013_17705 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ013_17715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ013_17715 SM00245 tail specific protease DJ013_17745 SM00382 ATPases associated with a variety of cellular activities DJ013_17750 SM00849 Metallo-beta-lactamase superfamily DJ013_17750 SM01027 Beta-Casp domain DJ013_17755 SM00798 AICARFT/IMPCHase bienzyme DJ013_17755 SM00851 MGS-like domain DJ013_17765 SM00487 DEAD-like helicases superfamily DJ013_17765 SM00490 helicase superfamily c-terminal domain DJ013_17770 SM00342 helix_turn_helix, arabinose operon control protein DJ013_17785 SM00822 DJ013_17785 DJ013_17795 SM00354 helix_turn _helix lactose operon repressor DJ013_17835 SM00028 Tetratricopeptide repeats DJ013_17840 SM00028 Tetratricopeptide repeats DJ013_17845 SM00028 Tetratricopeptide repeats DJ013_17890 SM00487 DEAD-like helicases superfamily DJ013_17890 SM00490 helicase superfamily c-terminal domain DJ013_17895 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ013_17960 SM00354 helix_turn _helix lactose operon repressor DJ013_18005 SM00996 S-adenosyl-L-homocysteine hydrolase DJ013_18005 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DJ013_18020 SM00344 helix_turn_helix ASNC type DJ013_18025 SM00633 Glycosyl hydrolase family 10 DJ013_18125 SM00450 Rhodanese Homology Domain DJ013_18265 SM00248 ankyrin repeats DJ013_18290 SM00382 ATPases associated with a variety of cellular activities DJ013_18305 SM00382 ATPases associated with a variety of cellular activities DJ013_18305 SM00448 cheY-homologous receiver domain DJ013_18310 SM00387 Histidine kinase-like ATPases DJ013_18360 SM00460 Transglutaminase/protease-like homologues DJ013_18380 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. DJ013_18405 SM00028 Tetratricopeptide repeats DJ013_18425 SM00710 Parallel beta-helix repeats DJ013_18435 SM00850 LytTr DNA-binding domain DJ013_18445 SM00382 ATPases associated with a variety of cellular activities DJ013_18450 SM00710 Parallel beta-helix repeats DJ013_18475 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. DJ013_18525 SM00507 HNH nucleases DJ013_18530 SM00316 Ribosomal protein S1-like RNA-binding domain DJ013_18620 SM00864 Tubulin/FtsZ family, GTPase domain DJ013_18620 SM00865 Tubulin/FtsZ family, C-terminal domain DJ013_18625 SM00842 Cell division protein FtsA DJ013_18710 SM00493 DJ013_18710 DJ013_18730 SM00421 helix_turn_helix, Lux Regulon DJ013_18730 SM00448 cheY-homologous receiver domain DJ013_18770 SM00886 Stress responsive A/B Barrel Domain DJ013_18820 SM00861 Transketolase, pyrimidine binding domain DJ013_18835 SM00382 ATPases associated with a variety of cellular activities DJ013_18860 SM00530 Helix-turn-helix XRE-family like proteins DJ013_18865 SM01321 DJ013_18865 DJ013_18885 SM00028 Tetratricopeptide repeats DJ013_18910 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ013_18910 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ013_18920 SM00507 HNH nucleases DJ013_18940 SM00812 Alpha-L-fucosidase DJ013_18950 SM01209 DJ013_18950 DJ013_18950 SM01210 DJ013_18950 DJ013_18990 SM00342 helix_turn_helix, arabinose operon control protein DJ013_18990 SM00387 Histidine kinase-like ATPases DJ013_18990 SM00388 His Kinase A (phosphoacceptor) domain DJ013_18990 SM00448 cheY-homologous receiver domain DJ013_19035 SM00822 DJ013_19035 DJ013_19060 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ013_19075 SM00342 helix_turn_helix, arabinose operon control protein DJ013_19085 SM01235 DJ013_19085 DJ013_19090 SM00244 prohibitin homologues DJ013_19100 SM00382 ATPases associated with a variety of cellular activities DJ013_19100 SM00448 cheY-homologous receiver domain DJ013_19115 SM01004 Delta-aminolevulinic acid dehydratase DJ013_19200 SM00448 cheY-homologous receiver domain DJ013_19200 SM00850 LytTr DNA-binding domain DJ013_19225 SM00382 ATPases associated with a variety of cellular activities DJ013_19225 SM00962 SRP54-type protein, GTPase domain DJ013_19225 SM00963 SRP54-type protein, helical bundle domain DJ013_19315 SM00360 RNA recognition motif DJ013_19335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ013_19360 SM00448 cheY-homologous receiver domain DJ013_19360 SM00862 Transcriptional regulatory protein, C terminal DJ013_19365 SM00387 Histidine kinase-like ATPases DJ013_19365 SM00388 His Kinase A (phosphoacceptor) domain DJ013_19395 SM00042 Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. DJ013_19400 SM00042 Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. DJ013_19410 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DJ013_19420 SM00886 Stress responsive A/B Barrel Domain DJ013_19465 SM00838 Elongation factor G C-terminus DJ013_19465 SM00889 Elongation factor G, domain IV DJ013_19500 SM00354 helix_turn _helix lactose operon repressor DJ013_19505 SM00710 Parallel beta-helix repeats DJ013_19520 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_19580 SM00382 ATPases associated with a variety of cellular activities DJ013_19590 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ013_19610 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ013_19625 SM00862 Transcriptional regulatory protein, C terminal DJ013_19685 SM00342 helix_turn_helix, arabinose operon control protein DJ013_19780 SM00382 ATPases associated with a variety of cellular activities DJ013_19810 SM00487 DEAD-like helicases superfamily DJ013_19810 SM00490 helicase superfamily c-terminal domain DJ013_19835 SM00487 DEAD-like helicases superfamily DJ013_19835 SM00490 helicase superfamily c-terminal domain DJ013_19915 SM00487 DEAD-like helicases superfamily DJ013_19915 SM00490 helicase superfamily c-terminal domain DJ013_19925 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ013_19990 SM00382 ATPases associated with a variety of cellular activities DJ013_20005 SM01007 Class II Aldolase and Adducin N-terminal domain DJ013_20065 SM00387 Histidine kinase-like ATPases DJ013_20070 SM00448 cheY-homologous receiver domain DJ013_20070 SM00850 LytTr DNA-binding domain DJ013_20075 SM00850 LytTr DNA-binding domain DJ013_20090 SM00560 LamG-like jellyroll fold domain DJ013_20225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ013_20225 SM00245 tail specific protease DJ013_20235 SM00450 Rhodanese Homology Domain DJ013_20265 SM00342 helix_turn_helix, arabinose operon control protein DJ013_20270 SM00448 cheY-homologous receiver domain DJ013_20290 SM00448 cheY-homologous receiver domain DJ013_20310 SM00448 cheY-homologous receiver domain DJ013_20325 SM00387 Histidine kinase-like ATPases DJ013_20325 SM00388 His Kinase A (phosphoacceptor) domain DJ013_20325 SM00448 cheY-homologous receiver domain DJ013_20330 SM00387 Histidine kinase-like ATPases DJ013_20330 SM00388 His Kinase A (phosphoacceptor) domain DJ013_20335 SM00382 ATPases associated with a variety of cellular activities DJ013_20335 SM00448 cheY-homologous receiver domain DJ013_20345 SM00387 Histidine kinase-like ATPases DJ013_20405 SM00633 Glycosyl hydrolase family 10 DJ013_20420 SM00822 DJ013_20420 DJ013_20430 SM00382 ATPases associated with a variety of cellular activities DJ013_20500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ013_20500 SM00387 Histidine kinase-like ATPases DJ013_20500 SM00388 His Kinase A (phosphoacceptor) domain DJ013_20525 SM00822 DJ013_20525 DJ013_20545 SM00448 cheY-homologous receiver domain DJ013_20545 SM00850 LytTr DNA-binding domain DJ013_20560 SM00342 helix_turn_helix, arabinose operon control protein DJ013_20575 SM00465 GIY-YIG type nucleases (URI domain) DJ013_20605 SM00421 helix_turn_helix, Lux Regulon DJ013_20605 SM00448 cheY-homologous receiver domain DJ013_20610 SM00028 Tetratricopeptide repeats DJ013_20610 SM00387 Histidine kinase-like ATPases DJ013_20610 SM00388 His Kinase A (phosphoacceptor) domain DJ013_20615 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ013_20630 SM00850 LytTr DNA-binding domain DJ013_20690 SM00448 cheY-homologous receiver domain DJ013_20690 SM00850 LytTr DNA-binding domain DJ013_20715 SM00434 DNA Topoisomerase IV DJ013_20720 SM00342 helix_turn_helix, arabinose operon control protein DJ013_20720 SM01065 Starch binding domain DJ013_20725 SM00448 cheY-homologous receiver domain DJ013_20725 SM00850 LytTr DNA-binding domain DJ013_20730 SM00850 LytTr DNA-binding domain DJ013_20760 SM00642 Alpha-amylase domain DJ013_20770 SM00850 LytTr DNA-binding domain DJ013_20795 SM00028 Tetratricopeptide repeats DJ013_20820 SM00797 Allophanate hydrolase subunit 2 DJ013_20825 SM00796 Allophanate hydrolase subunit 1 DJ013_20840 SM00530 Helix-turn-helix XRE-family like proteins DJ013_20845 SM00932 Scaffold protein Nfu/NifU N terminal DJ013_20910 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ013_20920 SM00886 Stress responsive A/B Barrel Domain DJ013_21025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ013_21025 SM00091 PAS domain DJ013_21025 SM00387 Histidine kinase-like ATPases DJ013_21025 SM00388 His Kinase A (phosphoacceptor) domain DJ013_21030 SM00100 Cyclic nucleotide-monophosphate binding domain DJ013_21030 SM00419 helix_turn_helix, cAMP Regulatory protein DJ013_21030 SM00448 cheY-homologous receiver domain DJ013_21035 SM00650 Ribosomal RNA adenine dimethylases DJ013_21040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ013_21040 SM00091 PAS domain DJ013_21040 SM00387 Histidine kinase-like ATPases DJ013_21040 SM00388 His Kinase A (phosphoacceptor) domain DJ013_21040 SM00448 cheY-homologous receiver domain DJ013_21060 SM00946 Prolyl-tRNA synthetase, C-terminal DJ013_21100 SM00560 LamG-like jellyroll fold domain DJ013_21130 SM01144 DJ013_21130 DJ013_21160 SM00245 tail specific protease DJ013_21175 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ013_21250 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ013_21260 SM00967 RNA 2'-O ribose methyltransferase substrate binding DJ013_21345 SM00028 Tetratricopeptide repeats DJ013_21390 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DJ013_21400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ013_21450 SM00850 LytTr DNA-binding domain DJ013_21470 SM00382 ATPases associated with a variety of cellular activities DJ013_21485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ013_21485 SM00387 Histidine kinase-like ATPases DJ013_21485 SM00388 His Kinase A (phosphoacceptor) domain DJ013_21490 SM00448 cheY-homologous receiver domain DJ013_21490 SM00862 Transcriptional regulatory protein, C terminal DJ013_21525 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ013_21620 SM00986 Uracil DNA glycosylase superfamily DJ013_21620 SM00987 UreE urease accessory protein, C-terminal domain DJ013_21685 SM00409 Immunoglobulin DJ013_21720 SM01011 Aminopeptidase P, N-terminal domain DJ013_21735 SM00829 Enoylreductase DJ013_21820 SM00563 Phosphate acyltransferases DJ013_21860 SM00257 Lysin motif DJ013_21870 SM00478 endonuclease III DJ013_22025 SM01119 DJ013_22025 DJ013_22030 SM00883 Chaperonin 10 Kd subunit