locus-tag class description pbN1_00020 PF02613 Nitrate reductase delta subunit pbN1_00040 PF13247 4Fe-4S dicluster domain pbN1_00050 PF00384 Molybdopterin oxidoreductase pbN1_00050 PF01568 Molydopterin dinucleotide binding domain pbN1_00080 PF00501 AMP-binding enzyme pbN1_00080 PF14535 AMP-binding enzyme C-terminal domain pbN1_00100 PF02538 Hydantoinase B/oxoprolinase pbN1_00110 PF01968 Hydantoinase/oxoprolinase pbN1_00110 PF05378 Hydantoinase/oxoprolinase N-terminal region pbN1_00120 PF08882 Acetone carboxylase gamma subunit pbN1_00130 PF05378 Hydantoinase/oxoprolinase N-terminal region pbN1_00130 PF01968 Hydantoinase/oxoprolinase pbN1_00150 PF01494 FAD binding domain pbN1_00160 PF02954 Bacterial regulatory protein, Fis family pbN1_00160 PF00158 Sigma-54 interaction domain pbN1_00160 PF02830 V4R domain pbN1_00160 PF06505 Activator of aromatic catabolism pbN1_00180 PF13188 PAS domain pbN1_00180 PF13426 PAS domain pbN1_00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_00190 PF00072 Response regulator receiver domain pbN1_00190 PF00196 Bacterial regulatory proteins, luxR family pbN1_00220 PF13333 Integrase core domain pbN1_00220 PF13276 HTH-like domain pbN1_00220 PF00665 Integrase core domain pbN1_00260 PF12833 Helix-turn-helix domain pbN1_00260 PF02311 AraC-like ligand binding domain pbN1_00270 PF01613 Flavin reductase like domain pbN1_00300 PF12833 Helix-turn-helix domain pbN1_00300 PF14525 AraC-binding-like domain pbN1_00310 PF13426 PAS domain pbN1_00310 PF00072 Response regulator receiver domain pbN1_00310 PF00512 His Kinase A (phospho-acceptor) domain pbN1_00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_00310 PF08448 PAS fold pbN1_00330 PF01695 IstB-like ATP binding protein pbN1_00340 PF13808 DDE_Tnp_1-associated pbN1_00340 PF01609 Transposase DDE domain pbN1_00350 PF01348 Type II intron maturase pbN1_00350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) pbN1_00390 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase pbN1_00400 PF02441 Flavoprotein pbN1_00420 PF00293 NUDIX domain pbN1_00430 PF01264 Chorismate synthase pbN1_00450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase pbN1_00450 PF00925 GTP cyclohydrolase II pbN1_00460 PF00216 Bacterial DNA-binding protein pbN1_00470 PF03707 Bacterial signalling protein N terminal repeat pbN1_00470 PF00990 Diguanylate cyclase, GGDEF domain pbN1_00470 PF00563 EAL domain pbN1_00490 PF17761 DUF1016 N-terminal domain pbN1_00490 PF06250 YhcG PDDEXK nuclease domain pbN1_00540 PF00271 Helicase conserved C-terminal domain pbN1_00540 PF00176 SNF2 family N-terminal domain pbN1_00610 PF00270 DEAD/DEAH box helicase pbN1_00610 PF00271 Helicase conserved C-terminal domain pbN1_00610 PF17191 RecG wedge domain pbN1_00750 PF00872 Transposase, Mutator family pbN1_00850 PF13614 AAA domain pbN1_01080 PF13098 Thioredoxin-like domain pbN1_01080 PF10411 Disulfide bond isomerase protein N-terminus pbN1_01170 PF04002 RadC-like JAB domain pbN1_01220 PF01258 Prokaryotic dksA/traR C4-type zinc finger pbN1_01230 PF00013 KH domain pbN1_01230 PF03725 3' exoribonuclease family, domain 2 pbN1_01230 PF00575 S1 RNA binding domain pbN1_01230 PF01138 3' exoribonuclease family, domain 1 pbN1_01230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain pbN1_01240 PF00312 Ribosomal protein S15 pbN1_01250 PF01509 TruB family pseudouridylate synthase (N terminal domain) pbN1_01250 PF16198 tRNA pseudouridylate synthase B C-terminal domain pbN1_01250 PF09157 Pseudouridine synthase II TruB, C-terminal pbN1_01260 PF02033 Ribosome-binding factor A pbN1_01270 PF00009 Elongation factor Tu GTP binding domain pbN1_01270 PF08364 Bacterial translation initiation factor IF-2 associated region pbN1_01270 PF04760 Translation initiation factor IF-2, N-terminal region pbN1_01270 PF11987 Translation-initiation factor 2 pbN1_01280 PF13184 NusA-like KH domain pbN1_01280 PF08529 NusA N-terminal domain pbN1_01290 PF02576 RimP N-terminal domain pbN1_01290 PF17384 RimP C-terminal SH3 domain pbN1_01300 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_01300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family pbN1_01330 PF00391 PEP-utilising enzyme, mobile domain pbN1_01330 PF02896 PEP-utilising enzyme, TIM barrel domain pbN1_01330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain pbN1_01340 PF03618 Kinase/pyrophosphorylase pbN1_01360 PF01641 SelR domain pbN1_01380 PF13546 DDE superfamily endonuclease pbN1_01390 PF13808 DDE_Tnp_1-associated pbN1_01390 PF01609 Transposase DDE domain pbN1_01430 PF03772 Competence protein pbN1_01430 PF00753 Metallo-beta-lactamase superfamily pbN1_01450 PF00005 ABC transporter pbN1_01460 PF12704 MacB-like periplasmic core domain pbN1_01460 PF02687 FtsX-like permease family pbN1_01490 PF02272 DHHA1 domain pbN1_01490 PF17768 RecJ OB domain pbN1_01490 PF01368 DHH family pbN1_01500 PF03922 OmpW family pbN1_01510 PF03462 PCRF domain pbN1_01510 PF00472 RF-1 domain pbN1_01520 PF04011 LemA family pbN1_01550 PF03641 Possible lysine decarboxylase pbN1_01560 PF00563 EAL domain pbN1_01560 PF00990 Diguanylate cyclase, GGDEF domain pbN1_01560 PF03707 Bacterial signalling protein N terminal repeat pbN1_01570 PF00221 Aromatic amino acid lyase pbN1_01580 PF17392 Urocanase C-terminal domain pbN1_01580 PF17391 Urocanase N-terminal domain pbN1_01580 PF01175 Urocanase Rossmann-like domain pbN1_01590 PF01979 Amidohydrolase family pbN1_01600 PF00491 Arginase family pbN1_01610 PF03880 DbpA RNA binding domain pbN1_01610 PF00271 Helicase conserved C-terminal domain pbN1_01610 PF00270 DEAD/DEAH box helicase pbN1_01640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_01640 PF12806 Acetyl-CoA dehydrogenase C-terminal like pbN1_01640 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_01640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_01650 PF00378 Enoyl-CoA hydratase/isomerase pbN1_01650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_01650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_01660 PF01144 Coenzyme A transferase pbN1_01670 PF01144 Coenzyme A transferase pbN1_01680 PF03601 Conserved hypothetical protein 698 pbN1_01710 PF07044 Protein of unknown function (DUF1329) pbN1_01730 PF03707 Bacterial signalling protein N terminal repeat pbN1_01730 PF00990 Diguanylate cyclase, GGDEF domain pbN1_01730 PF00563 EAL domain pbN1_01760 PF00501 AMP-binding enzyme pbN1_01760 PF13193 AMP-binding enzyme C-terminal domain pbN1_01840 PF17874 MalT-like TPR region pbN1_01840 PF00196 Bacterial regulatory proteins, luxR family pbN1_01870 PF08240 Alcohol dehydrogenase GroES-like domain pbN1_01870 PF00107 Zinc-binding dehydrogenase pbN1_01880 PF02668 Taurine catabolism dioxygenase TauD, TfdA family pbN1_01890 PF05853 beta-keto acid cleavage enzyme pbN1_01930 PF00005 ABC transporter pbN1_01940 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_01950 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_01960 PF12849 PBP superfamily domain pbN1_01970 PF13847 Methyltransferase domain pbN1_02060 PF02627 Carboxymuconolactone decarboxylase family pbN1_02070 PF00403 Heavy-metal-associated domain pbN1_02070 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_02070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain pbN1_02120 PF00072 Response regulator receiver domain pbN1_02140 PF08281 Sigma-70, region 4 pbN1_02140 PF04542 Sigma-70 region 2 pbN1_02200 PF04143 Sulphur transport pbN1_02220 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_02220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain pbN1_02220 PF00403 Heavy-metal-associated domain pbN1_02230 PF03601 Conserved hypothetical protein 698 pbN1_02260 PF07044 Protein of unknown function (DUF1329) pbN1_02290 PF00501 AMP-binding enzyme pbN1_02290 PF13193 AMP-binding enzyme C-terminal domain pbN1_02300 PF00072 Response regulator receiver domain pbN1_02300 PF00196 Bacterial regulatory proteins, luxR family pbN1_02310 PF01869 BadF/BadG/BcrA/BcrD ATPase family pbN1_02320 PF12729 Four helix bundle sensory module for signal transduction pbN1_02320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_02320 PF00672 HAMP domain pbN1_02350 PF05762 VWA domain containing CoxE-like protein pbN1_02360 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II pbN1_02360 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase pbN1_02360 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg pbN1_02370 PF13193 AMP-binding enzyme C-terminal domain pbN1_02370 PF00501 AMP-binding enzyme pbN1_02380 PF00501 AMP-binding enzyme pbN1_02380 PF13193 AMP-binding enzyme C-terminal domain pbN1_02390 PF00196 Bacterial regulatory proteins, luxR family pbN1_02390 PF00072 Response regulator receiver domain pbN1_02400 PF02803 Thiolase, C-terminal domain pbN1_02400 PF00108 Thiolase, N-terminal domain pbN1_02410 PF03061 Thioesterase superfamily pbN1_02420 PF00378 Enoyl-CoA hydratase/isomerase pbN1_02420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_02420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_02430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_02430 PF01568 Molydopterin dinucleotide binding domain pbN1_02430 PF00384 Molybdopterin oxidoreductase pbN1_02450 PF01869 BadF/BadG/BcrA/BcrD ATPase family pbN1_02460 PF01869 BadF/BadG/BcrA/BcrD ATPase family pbN1_02480 PF00037 4Fe-4S binding domain pbN1_02510 PF00510 Cytochrome c oxidase subunit III pbN1_02520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_02520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_02520 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_02540 PF01636 Phosphotransferase enzyme family pbN1_02560 PF00550 Phosphopantetheine attachment site pbN1_02560 PF00109 Beta-ketoacyl synthase, N-terminal domain pbN1_02560 PF14765 Polyketide synthase dehydratase pbN1_02560 PF16197 Ketoacyl-synthetase C-terminal extension pbN1_02560 PF08659 KR domain pbN1_02560 PF02801 Beta-ketoacyl synthase, C-terminal domain pbN1_02570 PF00501 AMP-binding enzyme pbN1_02570 PF13193 AMP-binding enzyme C-terminal domain pbN1_02590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_02590 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_02590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_02630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_02640 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg pbN1_02640 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II pbN1_02640 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase pbN1_02650 PF02634 FdhD/NarQ family pbN1_02670 PF07690 Major Facilitator Superfamily pbN1_02700 PF03050 Transposase IS66 family pbN1_02700 PF13817 IS66 C-terminal element pbN1_02700 PF13007 Transposase C of IS166 homeodomain pbN1_02700 PF13005 zinc-finger binding domain of transposase IS66 pbN1_02750 PF00665 Integrase core domain pbN1_02760 PF01695 IstB-like ATP binding protein pbN1_02820 PF00005 ABC transporter pbN1_02830 PF00005 ABC transporter pbN1_02830 PF12399 Branched-chain amino acid ATP-binding cassette transporter pbN1_02840 PF00171 Aldehyde dehydrogenase family pbN1_02850 PF03466 LysR substrate binding domain pbN1_02850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_02860 PF00171 Aldehyde dehydrogenase family pbN1_02870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase pbN1_02870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase pbN1_02890 PF02515 CoA-transferase family III pbN1_02910 PF00378 Enoyl-CoA hydratase/isomerase pbN1_02930 PF00108 Thiolase, N-terminal domain pbN1_02930 PF02803 Thiolase, C-terminal domain pbN1_02950 PF00106 short chain dehydrogenase pbN1_02970 PF01066 CDP-alcohol phosphatidyltransferase pbN1_02980 PF08459 UvrC Helix-hairpin-helix N-terminal pbN1_02980 PF01541 GIY-YIG catalytic domain pbN1_02980 PF02151 UvrB/uvrC motif pbN1_02990 PF00933 Glycosyl hydrolase family 3 N terminal domain pbN1_03000 PF01648 4'-phosphopantetheinyl transferase superfamily pbN1_03010 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ pbN1_03020 PF02565 Recombination protein O C terminal pbN1_03020 PF11967 Recombination protein O N terminal pbN1_03030 PF07650 KH domain pbN1_03030 PF01926 50S ribosome-binding GTPase pbN1_03040 PF00035 Double-stranded RNA binding motif pbN1_03040 PF14622 Ribonuclease-III-like pbN1_03060 PF10502 Signal peptidase, peptidase S26 pbN1_03070 PF00679 Elongation factor G C-terminus pbN1_03070 PF00009 Elongation factor Tu GTP binding domain pbN1_03070 PF03144 Elongation factor Tu domain 2 pbN1_03070 PF06421 GTP-binding protein LepA C-terminus pbN1_03090 PF13180 PDZ domain pbN1_03130 PF08281 Sigma-70, region 4 pbN1_03130 PF04542 Sigma-70 region 2 pbN1_03140 PF00890 FAD binding domain pbN1_03140 PF02910 Fumarate reductase flavoprotein C-term pbN1_03160 PF02801 Beta-ketoacyl synthase, C-terminal domain pbN1_03160 PF00109 Beta-ketoacyl synthase, N-terminal domain pbN1_03170 PF00550 Phosphopantetheine attachment site pbN1_03190 PF00698 Acyl transferase domain pbN1_03200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III pbN1_03200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal pbN1_03210 PF02504 Fatty acid synthesis protein pbN1_03220 PF01783 Ribosomal L32p protein family pbN1_03230 PF02620 Large ribosomal RNA subunit accumulation protein YceD pbN1_03240 PF02545 Maf-like protein pbN1_03250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_03260 PF01343 Peptidase family S49 pbN1_03260 PF06965 Na+/H+ antiporter 1 pbN1_03270 PF13419 Haloacid dehalogenase-like hydrolase pbN1_03280 PF01479 S4 domain pbN1_03280 PF00849 RNA pseudouridylate synthase pbN1_03290 PF00575 S1 RNA binding domain pbN1_03290 PF12111 Polyribonucleotide phosphorylase C terminal pbN1_03290 PF10150 Ribonuclease E/G family pbN1_03300 PF01451 Low molecular weight phosphotyrosine protein phosphatase pbN1_03310 PF04851 Type III restriction enzyme, res subunit pbN1_03310 PF12344 Ultra-violet resistance protein B pbN1_03310 PF17757 UvrB interaction domain pbN1_03310 PF00271 Helicase conserved C-terminal domain pbN1_03310 PF02151 UvrB/uvrC motif pbN1_03320 PF00155 Aminotransferase class I and II pbN1_03340 PF13195 Protein of unknown function (DUF4011) pbN1_03340 PF13087 AAA domain pbN1_03340 PF13086 AAA domain pbN1_03340 PF13195 Protein of unknown function (DUF4011) pbN1_03340 PF13087 AAA domain pbN1_03340 PF13086 AAA domain pbN1_03360 PF13654 AAA domain pbN1_03360 PF05362 Lon protease (S16) C-terminal proteolytic domain pbN1_03380 PF04055 Radical SAM superfamily pbN1_03380 PF06463 Molybdenum Cofactor Synthesis C pbN1_03420 PF07687 Peptidase dimerisation domain pbN1_03420 PF01546 Peptidase family M20/M25/M40 pbN1_03430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase pbN1_03430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain pbN1_03450 PF01026 TatD related DNase pbN1_03470 PF09115 DNA polymerase III, delta subunit, C terminal pbN1_03480 PF02223 Thymidylate kinase pbN1_03490 PF02618 YceG-like family pbN1_03500 PF01571 Aminomethyltransferase folate-binding domain pbN1_03530 PF03734 L,D-transpeptidase catalytic domain pbN1_03530 PF17969 L,D-transpeptidase C-terminal domain pbN1_03540 PF14437 MafB19-like deaminase pbN1_03560 PF08448 PAS fold pbN1_03560 PF00512 His Kinase A (phospho-acceptor) domain pbN1_03560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_03560 PF00072 Response regulator receiver domain pbN1_03560 PF13188 PAS domain pbN1_03590 PF00501 AMP-binding enzyme pbN1_03590 PF14535 AMP-binding enzyme C-terminal domain pbN1_03600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_03600 PF13247 4Fe-4S dicluster domain pbN1_03600 PF12837 4Fe-4S binding domain pbN1_03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_03620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II pbN1_03620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg pbN1_03630 PF00037 4Fe-4S binding domain pbN1_03640 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase pbN1_03660 PF13247 4Fe-4S dicluster domain pbN1_03670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_03670 PF01568 Molydopterin dinucleotide binding domain pbN1_03670 PF10518 TAT (twin-arginine translocation) pathway signal sequence pbN1_03670 PF00384 Molybdopterin oxidoreductase pbN1_03680 PF02634 FdhD/NarQ family pbN1_03690 PF08223 PaaX-like protein C-terminal domain pbN1_03690 PF07848 PaaX-like protein pbN1_03700 PF00037 4Fe-4S binding domain pbN1_03710 PF01047 MarR family pbN1_03720 PF00171 Aldehyde dehydrogenase family pbN1_03730 PF02913 FAD linked oxidases, C-terminal domain pbN1_03730 PF01565 FAD binding domain pbN1_03790 PF02954 Bacterial regulatory protein, Fis family pbN1_03790 PF00072 Response regulator receiver domain pbN1_03790 PF00158 Sigma-54 interaction domain pbN1_03800 PF02954 Bacterial regulatory protein, Fis family pbN1_03800 PF00072 Response regulator receiver domain pbN1_03800 PF00158 Sigma-54 interaction domain pbN1_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_03810 PF08448 PAS fold pbN1_03810 PF08447 PAS fold pbN1_03820 PF00501 AMP-binding enzyme pbN1_03820 PF13193 AMP-binding enzyme C-terminal domain pbN1_03830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component pbN1_03850 PF03480 Bacterial extracellular solute-binding protein, family 7 pbN1_03880 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family pbN1_03890 PF03466 LysR substrate binding domain pbN1_03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_03900 PF01479 S4 domain pbN1_03920 PF07715 TonB-dependent Receptor Plug Domain pbN1_03920 PF00593 TonB dependent receptor pbN1_03950 PF00990 Diguanylate cyclase, GGDEF domain pbN1_04000 PF00391 PEP-utilising enzyme, mobile domain pbN1_04000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain pbN1_04000 PF02896 PEP-utilising enzyme, TIM barrel domain pbN1_04040 PF00005 ABC transporter pbN1_04050 PF01258 Prokaryotic dksA/traR C4-type zinc finger pbN1_04060 PF12806 Acetyl-CoA dehydrogenase C-terminal like pbN1_04060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_04060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_04060 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_04070 PF00106 short chain dehydrogenase pbN1_04080 PF00108 Thiolase, N-terminal domain pbN1_04080 PF02803 Thiolase, C-terminal domain pbN1_04090 PF00378 Enoyl-CoA hydratase/isomerase pbN1_04100 PF13193 AMP-binding enzyme C-terminal domain pbN1_04100 PF00501 AMP-binding enzyme pbN1_04130 PF01695 IstB-like ATP binding protein pbN1_04140 PF00665 Integrase core domain pbN1_04160 PF17932 Tetracyclin repressor-like, C-terminal domain pbN1_04160 PF00440 Bacterial regulatory proteins, tetR family pbN1_04170 PF07690 Major Facilitator Superfamily pbN1_04180 PF00005 ABC transporter pbN1_04190 PF12399 Branched-chain amino acid ATP-binding cassette transporter pbN1_04190 PF00005 ABC transporter pbN1_04210 PF02653 Branched-chain amino acid transport system / permease component pbN1_04230 PF00501 AMP-binding enzyme pbN1_04230 PF13193 AMP-binding enzyme C-terminal domain pbN1_04250 PF00378 Enoyl-CoA hydratase/isomerase pbN1_04260 PF08240 Alcohol dehydrogenase GroES-like domain pbN1_04260 PF00107 Zinc-binding dehydrogenase pbN1_04270 PF00378 Enoyl-CoA hydratase/isomerase pbN1_04290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster pbN1_04290 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_04290 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region pbN1_04340 PF01869 BadF/BadG/BcrA/BcrD ATPase family pbN1_04350 PF01869 BadF/BadG/BcrA/BcrD ATPase family pbN1_04360 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component pbN1_04370 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component pbN1_04380 PF01202 Shikimate kinase pbN1_04410 PF05343 M42 glutamyl aminopeptidase pbN1_04420 PF08443 RimK-like ATP-grasp domain pbN1_04420 PF08245 Mur ligase middle domain pbN1_04420 PF02875 Mur ligase family, glutamate ligase domain pbN1_04430 PF13537 Glutamine amidotransferase domain pbN1_04430 PF00733 Asparagine synthase pbN1_04440 PF03741 Integral membrane protein TerC family pbN1_04460 PF06434 Aconitate hydratase 2 N-terminus pbN1_04460 PF11791 Aconitate B N-terminal domain pbN1_04460 PF00330 Aconitase family (aconitate hydratase) pbN1_04480 PF00330 Aconitase family (aconitate hydratase) pbN1_04480 PF00694 Aconitase C-terminal domain pbN1_04540 PF03692 Putative zinc- or iron-chelating domain pbN1_04550 PF02810 SEC-C motif pbN1_04550 PF03695 Uncharacterised protein family (UPF0149) pbN1_04560 PF02390 Putative methyltransferase pbN1_04580 PF01197 Ribosomal protein L31 pbN1_04600 PF00342 Phosphoglucose isomerase pbN1_04610 PF00929 Exonuclease pbN1_04620 PF16491 CAAX prenyl protease N-terminal, five membrane helices pbN1_04620 PF01435 Peptidase family M48 pbN1_04630 PF03193 RsgA GTPase pbN1_04640 PF02803 Thiolase, C-terminal domain pbN1_04640 PF00108 Thiolase, N-terminal domain pbN1_04650 PF17113 Regulatory signalling modulator protein AmpE pbN1_04650 PF03186 CobD/Cbib protein pbN1_04670 PF01434 Peptidase family M41 pbN1_04670 PF06480 FtsH Extracellular pbN1_04670 PF17862 AAA+ lid domain pbN1_04670 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_04690 PF01136 Peptidase family U32 pbN1_04710 PF00082 Subtilase family pbN1_04720 PF00005 ABC transporter pbN1_04720 PF00664 ABC transporter transmembrane region pbN1_04740 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit pbN1_04790 PF03176 MMPL family pbN1_04810 PF07044 Protein of unknown function (DUF1329) pbN1_04820 PF14525 AraC-binding-like domain pbN1_04820 PF12833 Helix-turn-helix domain pbN1_04830 PF00672 HAMP domain pbN1_04830 PF02743 Cache domain pbN1_04830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_04850 PF03544 Gram-negative bacterial TonB protein C-terminal pbN1_04860 PF00403 Heavy-metal-associated domain pbN1_04870 PF00403 Heavy-metal-associated domain pbN1_04890 PF06969 HemN C-terminal domain pbN1_04890 PF04055 Radical SAM superfamily pbN1_04900 PF00027 Cyclic nucleotide-binding domain pbN1_04900 PF13545 Crp-like helix-turn-helix domain pbN1_04920 PF04247 Invasion gene expression up-regulator, SirB pbN1_04940 PF00027 Cyclic nucleotide-binding domain pbN1_04940 PF00520 Ion transport protein pbN1_04950 PF00561 alpha/beta hydrolase fold pbN1_04950 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus pbN1_04960 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain pbN1_04960 PF00753 Metallo-beta-lactamase superfamily pbN1_04960 PF10996 Beta-Casp domain pbN1_05000 PF13746 4Fe-4S dicluster domain pbN1_05000 PF12801 4Fe-4S binding domain pbN1_05000 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase pbN1_05010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III pbN1_05010 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP pbN1_05040 PF00115 Cytochrome C and Quinol oxidase polypeptide I pbN1_05060 PF00403 Heavy-metal-associated domain pbN1_05070 PF00106 short chain dehydrogenase pbN1_05080 PF00293 NUDIX domain pbN1_05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_05110 PF06580 Histidine kinase pbN1_05120 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor pbN1_05120 PF07963 Prokaryotic N-terminal methylation motif pbN1_05190 PF04461 Protein of unknown function (DUF520) pbN1_05200 PF06865 Pyrimidine/purine nucleoside phosphorylase pbN1_05220 PF00764 Arginosuccinate synthase pbN1_05230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain pbN1_05230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain pbN1_05240 PF00202 Aminotransferase class-III pbN1_05260 PF01649 Ribosomal protein S20 pbN1_05270 PF03023 Lipid II flippase MurJ pbN1_05290 PF00365 Phosphofructokinase pbN1_05300 PF05191 Adenylate kinase, active site lid pbN1_05310 PF02348 Cytidylyltransferase pbN1_05320 PF03966 Trm112p-like protein pbN1_05330 PF02606 Tetraacyldisaccharide-1-P 4'-kinase pbN1_05340 PF02472 Biopolymer transport protein ExbD/TolR pbN1_05350 PF01618 MotA/TolQ/ExbB proton channel family pbN1_05360 PF02601 Exonuclease VII, large subunit pbN1_05360 PF13742 OB-fold nucleic acid binding domain pbN1_05370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain pbN1_05370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain pbN1_05380 PF02798 Glutathione S-transferase, N-terminal domain pbN1_05380 PF00043 Glutathione S-transferase, C-terminal domain pbN1_05390 PF00561 alpha/beta hydrolase fold pbN1_05390 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus pbN1_05410 PF04055 Radical SAM superfamily pbN1_05460 PF02321 Outer membrane efflux protein pbN1_05480 PF08139 Prokaryotic membrane lipoprotein lipid attachment site pbN1_05480 PF02321 Outer membrane efflux protein pbN1_05490 PF00873 AcrB/AcrD/AcrF family pbN1_05500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_05500 PF00529 HlyD membrane-fusion protein of T1SS pbN1_05510 PF09339 IclR helix-turn-helix domain pbN1_05510 PF01614 Bacterial transcriptional regulator pbN1_05560 PF05175 Methyltransferase small domain pbN1_05570 PF04264 YceI-like domain pbN1_05590 PF01292 Prokaryotic cytochrome b561 pbN1_05600 PF05368 NmrA-like family pbN1_05610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_05610 PF03466 LysR substrate binding domain pbN1_05620 PF00005 ABC transporter pbN1_05630 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_05690 PF18267 Rubredoxin NAD+ reductase C-terminal domain pbN1_05690 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_05690 PF04324 BFD-like [2Fe-2S] binding domain pbN1_05690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain pbN1_05700 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain pbN1_05700 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 pbN1_05740 PF00501 AMP-binding enzyme pbN1_05740 PF14535 AMP-binding enzyme C-terminal domain pbN1_05770 PF02634 FdhD/NarQ family pbN1_05780 PF00384 Molybdopterin oxidoreductase pbN1_05780 PF01568 Molydopterin dinucleotide binding domain pbN1_05780 PF00384 Molybdopterin oxidoreductase pbN1_05780 PF10518 TAT (twin-arginine translocation) pathway signal sequence pbN1_05780 PF01568 Molydopterin dinucleotide binding domain pbN1_05780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_05780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_05780 PF10518 TAT (twin-arginine translocation) pathway signal sequence pbN1_05800 PF13247 4Fe-4S dicluster domain pbN1_05810 PF00271 Helicase conserved C-terminal domain pbN1_05810 PF00270 DEAD/DEAH box helicase pbN1_05810 PF17191 RecG wedge domain pbN1_05850 PF00970 Oxidoreductase FAD-binding domain pbN1_05850 PF00175 Oxidoreductase NAD-binding domain pbN1_05850 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_05890 PF05362 Lon protease (S16) C-terminal proteolytic domain pbN1_05890 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_05890 PF02190 ATP-dependent protease La (LON) substrate-binding domain pbN1_05900 PF07724 AAA domain (Cdc48 subfamily) pbN1_05900 PF06689 ClpX C4-type zinc finger pbN1_05900 PF10431 C-terminal, D2-small domain, of ClpB protein pbN1_05910 PF00574 Clp protease pbN1_05920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase pbN1_05920 PF05697 Bacterial trigger factor protein (TF) pbN1_05920 PF05698 Bacterial trigger factor protein (TF) C-terminus pbN1_05930 PF06798 PrkA serine protein kinase C-terminal domain pbN1_05930 PF08298 PrkA AAA domain pbN1_05940 PF04285 Protein of unknown function (DUF444) pbN1_05950 PF04293 SpoVR like protein pbN1_05960 PF03853 YjeF-related protein N-terminus pbN1_05960 PF01256 Carbohydrate kinase pbN1_05990 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain pbN1_05990 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain pbN1_06000 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_06000 PF14821 Threonine synthase N terminus pbN1_06040 PF00672 HAMP domain pbN1_06040 PF17202 Single cache domain 3 pbN1_06040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_06050 PF00171 Aldehyde dehydrogenase family pbN1_06060 PF01842 ACT domain pbN1_06060 PF00742 Homoserine dehydrogenase pbN1_06060 PF03447 Homoserine dehydrogenase, NAD binding domain pbN1_06070 PF00155 Aminotransferase class I and II pbN1_06090 PF00578 AhpC/TSA family pbN1_06100 PF13638 PIN domain pbN1_06100 PF02562 PhoH-like protein pbN1_06130 PF00877 NlpC/P60 family pbN1_06150 PF13416 Bacterial extracellular solute-binding protein pbN1_06170 PF00263 Bacterial type II and III secretion system protein pbN1_06170 PF03958 Bacterial type II/III secretion system short domain pbN1_06180 PF00437 Type II/IV secretion system protein pbN1_06190 PF00482 Type II secretion system (T2SS), protein F pbN1_06200 PF07963 Prokaryotic N-terminal methylation motif pbN1_06200 PF08334 Type II secretion system (T2SS), protein G pbN1_06220 PF02501 Type II secretion system (T2SS), protein I pbN1_06220 PF07963 Prokaryotic N-terminal methylation motif pbN1_06230 PF07963 Prokaryotic N-terminal methylation motif pbN1_06230 PF11612 Type II secretion system (T2SS), protein J pbN1_06300 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_06310 PF00005 ABC transporter pbN1_06310 PF08402 TOBE domain pbN1_06320 PF03588 Leucyl/phenylalanyl-tRNA protein transferase pbN1_06330 PF04376 Arginine-tRNA-protein transferase, N terminus pbN1_06330 PF04377 Arginine-tRNA-protein transferase, C terminus pbN1_06340 PF01180 Dihydroorotate dehydrogenase pbN1_06350 PF02508 Rnf-Nqr subunit, membrane protein pbN1_06360 PF04060 Putative Fe-S cluster pbN1_06370 PF12838 4Fe-4S dicluster domain pbN1_06370 PF13375 RnfC Barrel sandwich hybrid domain pbN1_06370 PF10531 SLBB domain pbN1_06370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit pbN1_06380 PF03116 NQR2, RnfD, RnfE family pbN1_06390 PF04205 FMN-binding domain pbN1_06400 PF02508 Rnf-Nqr subunit, membrane protein pbN1_06410 PF00730 HhH-GPD superfamily base excision DNA repair protein pbN1_06410 PF10576 Iron-sulfur binding domain of endonuclease III pbN1_06410 PF00633 Helix-hairpin-helix motif pbN1_06430 PF00034 Cytochrome c pbN1_06440 PF00034 Cytochrome c pbN1_06450 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_06450 PF17862 AAA+ lid domain pbN1_06450 PF01434 Peptidase family M41 pbN1_06490 PF00654 Voltage gated chloride channel pbN1_06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_06500 PF00183 Hsp90 protein pbN1_06510 PF01272 Transcription elongation factor, GreA/GreB, C-term pbN1_06510 PF03449 Transcription elongation factor, N-terminal pbN1_06520 PF13406 Transglycosylase SLT domain pbN1_06550 PF01053 Cys/Met metabolism PLP-dependent enzyme pbN1_06560 PF12697 Alpha/beta hydrolase family pbN1_06590 PF01545 Cation efflux family pbN1_06600 PF00317 Ribonucleotide reductase, all-alpha domain pbN1_06600 PF02867 Ribonucleotide reductase, barrel domain pbN1_06600 PF03477 ATP cone domain pbN1_06610 PF00293 NUDIX domain pbN1_06620 PF00361 Proton-conducting membrane transporter pbN1_06630 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus pbN1_06630 PF00361 Proton-conducting membrane transporter pbN1_06640 PF00361 Proton-conducting membrane transporter pbN1_06640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus pbN1_06650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L pbN1_06660 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 pbN1_06670 PF12838 4Fe-4S dicluster domain pbN1_06680 PF00146 NADH dehydrogenase pbN1_06690 PF00384 Molybdopterin oxidoreductase pbN1_06690 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal pbN1_06690 PF00384 Molybdopterin oxidoreductase pbN1_06690 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region pbN1_06690 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region pbN1_06690 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal pbN1_06700 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit pbN1_06700 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region pbN1_06700 PF10531 SLBB domain pbN1_06720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit pbN1_06730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit pbN1_06740 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit pbN1_06750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 pbN1_06760 PF03840 Preprotein translocase SecG subunit pbN1_06770 PF00121 Triosephosphate isomerase pbN1_06780 PF00005 ABC transporter pbN1_06790 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_06800 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_06810 PF12849 PBP superfamily domain pbN1_06820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III pbN1_06820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I pbN1_06820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II pbN1_06820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain pbN1_06830 PF00809 Pterin binding enzyme pbN1_06840 PF17862 AAA+ lid domain pbN1_06840 PF06480 FtsH Extracellular pbN1_06840 PF01434 Peptidase family M41 pbN1_06840 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_06850 PF01728 FtsJ-like methyltransferase pbN1_06860 PF01985 CRS1 / YhbY (CRM) domain pbN1_06880 PF01272 Transcription elongation factor, GreA/GreB, C-term pbN1_06880 PF03449 Transcription elongation factor, N-terminal pbN1_06890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain pbN1_06890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain pbN1_06890 PF02142 MGS-like domain pbN1_06900 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain pbN1_06900 PF00117 Glutamine amidotransferase class-I pbN1_06910 PF01113 Dihydrodipicolinate reductase, N-terminus pbN1_06910 PF05173 Dihydrodipicolinate reductase, C-terminus pbN1_06920 PF04355 SmpA / OmlA family pbN1_06930 PF01475 Ferric uptake regulator family pbN1_06940 PF02463 RecF/RecN/SMC N terminal domain pbN1_06950 PF01513 ATP-NAD kinase pbN1_06960 PF01628 HrcA protein C terminal domain pbN1_06960 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding pbN1_06970 PF00762 Ferrochelatase pbN1_06980 PF03793 PASTA domain pbN1_06980 PF00069 Protein kinase domain pbN1_06990 PF01025 GrpE pbN1_07000 PF00012 Hsp70 protein pbN1_07010 PF00226 DnaJ domain pbN1_07010 PF01556 DnaJ C terminal domain pbN1_07010 PF00684 DnaJ central domain pbN1_07020 PF09190 DALR domain pbN1_07020 PF01406 tRNA synthetases class I (C) catalytic domain pbN1_07040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD pbN1_07050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD pbN1_07060 PF00149 Calcineurin-like phosphoesterase pbN1_07070 PF01053 Cys/Met metabolism PLP-dependent enzyme pbN1_07080 PF00156 Phosphoribosyl transferase domain pbN1_07100 PF03330 Lytic transglycolase pbN1_07100 PF05036 Sporulation related domain pbN1_07110 PF02875 Mur ligase family, glutamate ligase domain pbN1_07110 PF08245 Mur ligase middle domain pbN1_07120 PF01039 Carboxyl transferase domain pbN1_07120 PF17848 Acetyl-coA carboxylase zinc finger domain pbN1_07130 PF00290 Tryptophan synthase alpha chain pbN1_07140 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_07150 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase pbN1_07160 PF01416 tRNA pseudouridine synthase pbN1_07190 PF02774 Semialdehyde dehydrogenase, dimerisation domain pbN1_07190 PF01118 Semialdehyde dehydrogenase, NAD binding domain pbN1_07200 PF00180 Isocitrate/isopropylmalate dehydrogenase pbN1_07210 PF00694 Aconitase C-terminal domain pbN1_07220 PF00330 Aconitase family (aconitate hydratase) pbN1_07230 PF01435 Peptidase family M48 pbN1_07240 PF12832 MFS_1 like family pbN1_07250 PF01264 Chorismate synthase pbN1_07260 PF01842 ACT domain pbN1_07270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_07270 PF00205 Thiamine pyrophosphate enzyme, central domain pbN1_07270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain pbN1_07280 PF00501 AMP-binding enzyme pbN1_07280 PF13193 AMP-binding enzyme C-terminal domain pbN1_07310 PF11953 Domain of unknown function (DUF3470) pbN1_07310 PF00037 4Fe-4S binding domain pbN1_07320 PF00085 Thioredoxin pbN1_07330 PF07497 Rho termination factor, RNA-binding domain pbN1_07330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain pbN1_07330 PF07498 Rho termination factor, N-terminal domain pbN1_07340 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) pbN1_07350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_07350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_07360 PF02913 FAD linked oxidases, C-terminal domain pbN1_07360 PF01565 FAD binding domain pbN1_07370 PF01734 Patatin-like phospholipase pbN1_07380 PF18693 TRAM domain pbN1_07380 PF00919 Uncharacterized protein family UPF0004 pbN1_07380 PF04055 Radical SAM superfamily pbN1_07390 PF07879 PHB/PHA accumulation regulator DNA-binding domain pbN1_07390 PF05233 PHB accumulation regulatory domain pbN1_07400 PF00106 short chain dehydrogenase pbN1_07410 PF00106 short chain dehydrogenase pbN1_07420 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus pbN1_07430 PF02578 Multi-copper polyphenol oxidoreductase laccase pbN1_07440 PF00849 RNA pseudouridylate synthase pbN1_07450 PF13525 Outer membrane lipoprotein pbN1_07460 PF00483 Nucleotidyl transferase pbN1_07460 PF01050 Mannose-6-phosphate isomerase pbN1_07470 PF00158 Sigma-54 interaction domain pbN1_07470 PF02954 Bacterial regulatory protein, Fis family pbN1_07470 PF13426 PAS domain pbN1_07490 PF01144 Coenzyme A transferase pbN1_07500 PF01144 Coenzyme A transferase pbN1_07510 PF16177 Acetyl-coenzyme A synthetase N-terminus pbN1_07510 PF00501 AMP-binding enzyme pbN1_07510 PF13193 AMP-binding enzyme C-terminal domain pbN1_07560 PF08882 Acetone carboxylase gamma subunit pbN1_07570 PF02538 Hydantoinase B/oxoprolinase pbN1_07580 PF05378 Hydantoinase/oxoprolinase N-terminal region pbN1_07580 PF01968 Hydantoinase/oxoprolinase pbN1_07610 PF02954 Bacterial regulatory protein, Fis family pbN1_07610 PF00158 Sigma-54 interaction domain pbN1_07610 PF00072 Response regulator receiver domain pbN1_07670 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_07680 PF00923 Transaldolase/Fructose-6-phosphate aldolase pbN1_07700 PF01584 CheW-like domain pbN1_07700 PF02895 Signal transducing histidine kinase, homodimeric domain pbN1_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_07700 PF01627 Hpt domain pbN1_07700 PF00072 Response regulator receiver domain pbN1_07710 PF04344 Chemotaxis phosphatase, CheZ pbN1_07720 PF00072 Response regulator receiver domain pbN1_07730 PF00072 Response regulator receiver domain pbN1_07730 PF01584 CheW-like domain pbN1_07740 PF00072 Response regulator receiver domain pbN1_07740 PF01584 CheW-like domain pbN1_07750 PF01339 CheB methylesterase pbN1_07750 PF00072 Response regulator receiver domain pbN1_07760 PF01739 CheR methyltransferase, SAM binding domain pbN1_07760 PF03705 CheR methyltransferase, all-alpha domain pbN1_07770 PF13677 Membrane MotB of proton-channel complex MotA/MotB pbN1_07770 PF00691 OmpA family pbN1_07780 PF01618 MotA/TolQ/ExbB proton channel family pbN1_07790 PF05280 Flagellar transcriptional activator (FlhC) pbN1_07800 PF05247 Flagellar transcriptional activator (FlhD) pbN1_07830 PF01979 Amidohydrolase family pbN1_07840 PF00501 AMP-binding enzyme pbN1_07840 PF13193 AMP-binding enzyme C-terminal domain pbN1_07860 PF00682 HMGL-like pbN1_07870 PF00501 AMP-binding enzyme pbN1_07870 PF13193 AMP-binding enzyme C-terminal domain pbN1_07880 PF02785 Biotin carboxylase C-terminal domain pbN1_07880 PF00289 Biotin carboxylase, N-terminal domain pbN1_07880 PF00364 Biotin-requiring enzyme pbN1_07880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain pbN1_07890 PF01039 Carboxyl transferase domain pbN1_07900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_07900 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_07900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_07910 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term pbN1_07910 PF12833 Helix-turn-helix domain pbN1_07920 PF01738 Dienelactone hydrolase family pbN1_07920 PF00156 Phosphoribosyl transferase domain pbN1_07940 PF02417 Chromate transporter pbN1_07950 PF07681 DoxX pbN1_07960 PF01654 Cytochrome bd terminal oxidase subunit I pbN1_07970 PF02322 Cytochrome bd terminal oxidase subunit II pbN1_07990 PF00563 EAL domain pbN1_07990 PF00990 Diguanylate cyclase, GGDEF domain pbN1_07990 PF05231 MASE1 pbN1_07990 PF08447 PAS fold pbN1_07990 PF08448 PAS fold pbN1_07990 PF13426 PAS domain pbN1_08000 PF00563 EAL domain pbN1_08000 PF08668 HDOD domain pbN1_08020 PF00171 Aldehyde dehydrogenase family pbN1_08040 PF01261 Xylose isomerase-like TIM barrel pbN1_08050 PF13660 Domain of unknown function (DUF4147) pbN1_08050 PF05161 MOFRL family pbN1_08060 PF03928 Haem-degrading pbN1_08080 PF00534 Glycosyl transferases group 1 pbN1_08080 PF13439 Glycosyltransferase Family 4 pbN1_08090 PF04355 SmpA / OmlA family pbN1_08100 PF00892 EamA-like transporter family pbN1_08110 PF00909 Ammonium Transporter Family pbN1_08150 PF04851 Type III restriction enzyme, res subunit pbN1_08150 PF08774 VRR-NUC domain pbN1_08190 PF01555 DNA methylase pbN1_08190 PF18273 Type III R-M EcoP15I C-terminal domain pbN1_08220 PF01053 Cys/Met metabolism PLP-dependent enzyme pbN1_08250 PF00571 CBS domain pbN1_08260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_08270 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg pbN1_08270 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase pbN1_08270 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II pbN1_08280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster pbN1_08280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region pbN1_08280 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_08320 PF13473 Cupredoxin-like domain pbN1_08320 PF18764 Nitrous oxide reductase propeller repeat pbN1_08320 PF18793 Nitrous oxide reductase propeller repeat 2 pbN1_08330 PF00392 Bacterial regulatory proteins, gntR family pbN1_08330 PF00155 Aminotransferase class I and II pbN1_08350 PF11953 Domain of unknown function (DUF3470) pbN1_08350 PF00037 4Fe-4S binding domain pbN1_08360 PF00027 Cyclic nucleotide-binding domain pbN1_08360 PF13545 Crp-like helix-turn-helix domain pbN1_08370 PF13085 2Fe-2S iron-sulfur cluster binding domain pbN1_08380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit pbN1_08390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit pbN1_08400 PF00478 IMP dehydrogenase / GMP reductase domain pbN1_08400 PF00571 CBS domain pbN1_08410 PF00005 ABC transporter pbN1_08420 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_08430 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_08440 PF00497 Bacterial extracellular solute-binding proteins, family 3 pbN1_08480 PF13173 AAA domain pbN1_08480 PF13635 Domain of unknown function (DUF4143) pbN1_08590 PF00669 Bacterial flagellin N-terminal helical region pbN1_08590 PF00700 Bacterial flagellin C-terminal helical region pbN1_08590 PF08884 Flagellin D3 domain pbN1_08610 PF07196 Flagellin hook IN motif pbN1_08610 PF07195 Flagellar hook-associated protein 2 C-terminus pbN1_08610 PF02465 Flagellar hook-associated protein 2 N-terminus pbN1_08630 PF02561 Flagellar protein FliS pbN1_08660 PF01312 FlhB HrpN YscU SpaS Family pbN1_08670 PF07317 Flagellar regulator YcgR pbN1_08670 PF07238 PilZ domain pbN1_08700 PF02049 Flagellar hook-basal body complex protein FliE pbN1_08710 PF02954 Bacterial regulatory protein, Fis family pbN1_08710 PF00072 Response regulator receiver domain pbN1_08710 PF00158 Sigma-54 interaction domain pbN1_08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_08720 PF00512 His Kinase A (phospho-acceptor) domain pbN1_08720 PF13188 PAS domain pbN1_08740 PF01514 Secretory protein of YscJ/FliF family pbN1_08740 PF08345 Flagellar M-ring protein C-terminal pbN1_08750 PF01706 FliG C-terminal domain pbN1_08750 PF14841 FliG middle domain pbN1_08750 PF14842 FliG N-terminal domain pbN1_08770 PF18269 T3SS EscN ATPase C-terminal domain pbN1_08770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain pbN1_08810 PF02154 Flagellar motor switch protein FliM pbN1_08810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term pbN1_08820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term pbN1_08820 PF16973 Flagellar motor switch protein FliN N-terminal pbN1_08830 PF04347 Flagellar biosynthesis protein, FliO pbN1_08840 PF00813 FliP family pbN1_08850 PF01313 Bacterial export proteins, family 3 pbN1_08860 PF01311 Bacterial export proteins, family 1 pbN1_08880 PF00669 Bacterial flagellin N-terminal helical region pbN1_08890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal pbN1_08890 PF00460 Flagella basal body rod protein pbN1_08900 PF10135 Rod binding protein pbN1_08900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase pbN1_08910 PF02119 Flagellar P-ring protein pbN1_08920 PF02107 Flagellar L-ring protein pbN1_08930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal pbN1_08930 PF00460 Flagella basal body rod protein pbN1_08940 PF00460 Flagella basal body rod protein pbN1_08940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal pbN1_08950 PF07559 Flagellar basal body protein FlaE pbN1_08950 PF00460 Flagella basal body rod protein pbN1_08950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal pbN1_08960 PF03963 Flagellar hook capping protein - N-terminal region pbN1_08960 PF13860 FlgD Ig-like domain pbN1_08960 PF13861 FlgD Tudor-like domain pbN1_08970 PF00460 Flagella basal body rod protein pbN1_08970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal pbN1_08980 PF00460 Flagella basal body rod protein pbN1_09060 PF04542 Sigma-70 region 2 pbN1_09060 PF08281 Sigma-70, region 4 pbN1_09100 PF00579 tRNA synthetases class I (W and Y) pbN1_09100 PF01479 S4 domain pbN1_09110 PF01476 LysM domain pbN1_09110 PF08525 Opacity-associated protein A N-terminal motif pbN1_09110 PF01551 Peptidase family M23 pbN1_09120 PF01521 Iron-sulphur cluster biosynthesis pbN1_09130 PF01118 Semialdehyde dehydrogenase, NAD binding domain pbN1_09130 PF02774 Semialdehyde dehydrogenase, dimerisation domain pbN1_09140 PF00380 Ribosomal protein S9/S16 pbN1_09150 PF00572 Ribosomal protein L13 pbN1_09160 PF02566 OsmC-like protein pbN1_09170 PF03232 Ubiquinone biosynthesis protein COQ7 pbN1_09230 PF00293 NUDIX domain pbN1_09240 PF04073 Aminoacyl-tRNA editing domain pbN1_09240 PF03129 Anticodon binding domain pbN1_09240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) pbN1_09250 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain pbN1_09250 PF01464 Transglycosylase SLT domain pbN1_09280 PF00872 Transposase, Mutator family pbN1_09290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_09290 PF00512 His Kinase A (phospho-acceptor) domain pbN1_09310 PF00072 Response regulator receiver domain pbN1_09310 PF00158 Sigma-54 interaction domain pbN1_09330 PF01523 Putative modulator of DNA gyrase pbN1_09340 PF00795 Carbon-nitrogen hydrolase pbN1_09360 PF03710 Glutamate-ammonia ligase adenylyltransferase pbN1_09360 PF08335 GlnD PII-uridylyltransferase pbN1_09450 PF01063 Amino-transferase class IV pbN1_09480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain pbN1_09480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I pbN1_09480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II pbN1_09480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III pbN1_09490 PF01411 tRNA synthetases class II (A) pbN1_09490 PF02272 DHHA1 domain pbN1_09490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain pbN1_09500 PF01923 Cobalamin adenosyltransferase pbN1_09510 PF11799 impB/mucB/samB family C-terminal domain pbN1_09510 PF00817 impB/mucB/samB family pbN1_09520 PF00793 DAHP synthetase I family pbN1_09530 PF00994 Probable molybdopterin binding domain pbN1_09540 PF04751 Protein of unknown function (DUF615) pbN1_09550 PF01523 Putative modulator of DNA gyrase pbN1_09560 PF03480 Bacterial extracellular solute-binding protein, family 7 pbN1_09570 PF03480 Bacterial extracellular solute-binding protein, family 7 pbN1_09580 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component pbN1_09590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component pbN1_09600 PF00300 Histidine phosphatase superfamily (branch 1) pbN1_09610 PF00464 Serine hydroxymethyltransferase pbN1_09620 PF03477 ATP cone domain pbN1_09630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region pbN1_09630 PF01872 RibD C-terminal domain pbN1_09640 PF00899 ThiF family pbN1_09660 PF13180 PDZ domain pbN1_09660 PF03572 Peptidase family S41 pbN1_09670 PF01551 Peptidase family M23 pbN1_09680 PF00300 Histidine phosphatase superfamily (branch 1) pbN1_09700 PF00581 Rhodanese-like domain pbN1_09710 PF00462 Glutaredoxin pbN1_09720 PF02556 Preprotein translocase subunit SecB pbN1_09740 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus pbN1_09740 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus pbN1_09750 PF00588 SpoU rRNA Methylase family pbN1_09760 PF00156 Phosphoribosyl transferase domain pbN1_09770 PF06968 Biotin and Thiamin Synthesis associated domain pbN1_09770 PF04055 Radical SAM superfamily pbN1_09780 PF08241 Methyltransferase domain pbN1_09800 PF00490 Delta-aminolevulinic acid dehydratase pbN1_09810 PF01926 50S ribosome-binding GTPase pbN1_09820 PF00034 Cytochrome c pbN1_09830 PF03453 MoeA N-terminal region (domain I and II) pbN1_09830 PF03454 MoeA C-terminal region (domain IV) pbN1_09830 PF00994 Probable molybdopterin binding domain pbN1_09840 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) pbN1_09850 PF01895 PhoU domain pbN1_09860 PF04362 Bacterial Fe(2+) trafficking pbN1_09870 PF13426 PAS domain pbN1_09870 PF00563 EAL domain pbN1_09870 PF00990 Diguanylate cyclase, GGDEF domain pbN1_09870 PF05231 MASE1 pbN1_09870 PF08447 PAS fold pbN1_09870 PF08448 PAS fold pbN1_09880 PF00583 Acetyltransferase (GNAT) family pbN1_09880 PF00696 Amino acid kinase family pbN1_09890 PF03976 Polyphosphate kinase 2 (PPK2) pbN1_09900 PF04452 RNA methyltransferase pbN1_09920 PF00459 Inositol monophosphatase family pbN1_09930 PF00485 Phosphoribulokinase / Uridine kinase family pbN1_09940 PF02779 Transketolase, pyrimidine binding domain pbN1_09940 PF02780 Transketolase, C-terminal domain pbN1_09940 PF00456 Transketolase, thiamine diphosphate binding domain pbN1_09950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain pbN1_09950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain pbN1_09960 PF00162 Phosphoglycerate kinase pbN1_09970 PF00563 EAL domain pbN1_09970 PF03707 Bacterial signalling protein N terminal repeat pbN1_09970 PF00990 Diguanylate cyclase, GGDEF domain pbN1_09980 PF00224 Pyruvate kinase, barrel domain pbN1_09980 PF02887 Pyruvate kinase, alpha/beta domain pbN1_10000 PF01116 Fructose-bisphosphate aldolase class-II pbN1_10040 PF00563 EAL domain pbN1_10040 PF00990 Diguanylate cyclase, GGDEF domain pbN1_10040 PF08448 PAS fold pbN1_10050 PF01385 Probable transposase pbN1_10050 PF12323 Helix-turn-helix domain pbN1_10050 PF07282 Putative transposase DNA-binding domain pbN1_10080 PF13488 Glycine zipper pbN1_10080 PF00691 OmpA family pbN1_10100 PF01259 SAICAR synthetase pbN1_10120 PF00114 Pilin (bacterial filament) pbN1_10120 PF07963 Prokaryotic N-terminal methylation motif pbN1_10180 PF00665 Integrase core domain pbN1_10190 PF01695 IstB-like ATP binding protein pbN1_10250 PF01432 Peptidase family M3 pbN1_10280 PF13545 Crp-like helix-turn-helix domain pbN1_10280 PF00027 Cyclic nucleotide-binding domain pbN1_10300 PF00398 Ribosomal RNA adenine dimethylase pbN1_10310 PF04166 Pyridoxal phosphate biosynthetic protein PdxA pbN1_10320 PF09312 SurA N-terminal domain pbN1_10320 PF00639 PPIC-type PPIASE domain pbN1_10330 PF03968 OstA-like protein pbN1_10330 PF04453 LPS transport system D pbN1_10340 PF01636 Phosphotransferase enzyme family pbN1_10350 PF00483 Nucleotidyl transferase pbN1_10360 PF00557 Metallopeptidase family M24 pbN1_10360 PF05195 Aminopeptidase P, N-terminal domain pbN1_10370 PF01494 FAD binding domain pbN1_10380 PF01207 Dihydrouridine synthase (Dus) pbN1_10390 PF02954 Bacterial regulatory protein, Fis family pbN1_10400 PF01808 AICARFT/IMPCHase bienzyme pbN1_10400 PF02142 MGS-like domain pbN1_10410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain pbN1_10410 PF02843 Phosphoribosylglycinamide synthetase, C domain pbN1_10410 PF02844 Phosphoribosylglycinamide synthetase, N domain pbN1_10420 PF01218 Coproporphyrinogen III oxidase pbN1_10440 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase pbN1_10450 PF02602 Uroporphyrinogen-III synthase HemD pbN1_10460 PF03900 Porphobilinogen deaminase, C-terminal domain pbN1_10460 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain pbN1_10470 PF00311 Phosphoenolpyruvate carboxylase pbN1_10480 PF00072 Response regulator receiver domain pbN1_10480 PF04397 LytTr DNA-binding domain pbN1_10490 PF00206 Lyase pbN1_10490 PF14698 Argininosuccinate lyase C-terminal pbN1_10500 PF00069 Protein kinase domain pbN1_10500 PF03793 PASTA domain pbN1_10510 PF00462 Glutaredoxin pbN1_10520 PF17827 PrmC N-terminal domain pbN1_10520 PF05175 Methyltransferase small domain pbN1_10530 PF00472 RF-1 domain pbN1_10530 PF03462 PCRF domain pbN1_10540 PF01488 Shikimate / quinate 5-dehydrogenase pbN1_10540 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain pbN1_10540 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain pbN1_10550 PF00512 His Kinase A (phospho-acceptor) domain pbN1_10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_10550 PF08521 Two-component sensor kinase N-terminal pbN1_10560 PF00486 Transcriptional regulatory protein, C terminal pbN1_10560 PF00072 Response regulator receiver domain pbN1_10570 PF00118 TCP-1/cpn60 chaperonin family pbN1_10580 PF00166 Chaperonin 10 Kd subunit pbN1_10600 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain pbN1_10610 PF01266 FAD dependent oxidoreductase pbN1_10620 PF04386 Stringent starvation protein B pbN1_10630 PF02798 Glutathione S-transferase, N-terminal domain pbN1_10630 PF00043 Glutathione S-transferase, C-terminal domain pbN1_10640 PF02167 Cytochrome C1 family pbN1_10650 PF00033 Cytochrome b/b6/petB pbN1_10650 PF00032 Cytochrome b(C-terminal)/b6/petD pbN1_10660 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal pbN1_10660 PF00355 Rieske [2Fe-2S] domain pbN1_10670 PF02132 RecR protein pbN1_10670 PF13662 Toprim domain pbN1_10680 PF02575 YbaB/EbfC DNA-binding family pbN1_10690 PF12169 DNA polymerase III subunits gamma and tau domain III pbN1_10690 PF12170 DNA polymerase III tau subunit V interacting with alpha pbN1_10690 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding pbN1_10700 PF13193 AMP-binding enzyme C-terminal domain pbN1_10700 PF00501 AMP-binding enzyme pbN1_10730 PF01568 Molydopterin dinucleotide binding domain pbN1_10730 PF00384 Molybdopterin oxidoreductase pbN1_10730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_10750 PF07690 Major Facilitator Superfamily pbN1_10770 PF18267 Rubredoxin NAD+ reductase C-terminal domain pbN1_10770 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_10770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain pbN1_10770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain pbN1_10770 PF04324 BFD-like [2Fe-2S] binding domain pbN1_10780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_10780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_10820 PF08032 RNA 2'-O ribose methyltransferase substrate binding pbN1_10820 PF00588 SpoU rRNA Methylase family pbN1_10830 PF00773 RNB domain pbN1_10830 PF08206 Ribonuclease B OB domain pbN1_10830 PF08461 Ribonuclease R winged-helix domain pbN1_10830 PF17876 Cold shock domain pbN1_10830 PF00575 S1 RNA binding domain pbN1_10840 PF00709 Adenylosuccinate synthetase pbN1_10850 PF13393 Histidyl-tRNA synthetase pbN1_10870 PF01145 SPFH domain / Band 7 family pbN1_10880 PF01145 SPFH domain / Band 7 family pbN1_10880 PF12221 Bacterial membrane protein N terminal pbN1_10890 PF13167 GTP-binding GTPase N-terminal pbN1_10890 PF01926 50S ribosome-binding GTPase pbN1_10890 PF16360 GTP-binding GTPase Middle Region pbN1_10900 PF17209 Hfq protein pbN1_10910 PF01926 50S ribosome-binding GTPase pbN1_10910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal pbN1_10920 PF13360 PQQ-like domain pbN1_10930 PF09976 Tetratricopeptide repeat-like domain pbN1_10940 PF13393 Histidyl-tRNA synthetase pbN1_10940 PF03129 Anticodon binding domain pbN1_10950 PF04551 GcpE protein pbN1_10960 PF13464 Domain of unknown function (DUF4115) pbN1_10980 PF04055 Radical SAM superfamily pbN1_10990 PF00334 Nucleoside diphosphate kinase pbN1_11000 PF02629 CoA binding domain pbN1_11000 PF00549 CoA-ligase pbN1_11010 PF00549 CoA-ligase pbN1_11010 PF08442 ATP-grasp domain pbN1_11040 PF01784 NIF3 (NGG1p interacting factor 3) pbN1_11050 PF13180 PDZ domain pbN1_11050 PF17820 PDZ domain pbN1_11060 PF00902 Sec-independent protein translocase protein (TatC) pbN1_11070 PF02416 mttA/Hcf106 family pbN1_11080 PF02416 mttA/Hcf106 family pbN1_11100 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase pbN1_11110 PF01502 Phosphoribosyl-AMP cyclohydrolase pbN1_11120 PF00977 Histidine biosynthesis protein pbN1_11130 PF00977 Histidine biosynthesis protein pbN1_11140 PF00117 Glutamine amidotransferase class-I pbN1_11150 PF00475 Imidazoleglycerol-phosphate dehydratase pbN1_11160 PF00155 Aminotransferase class I and II pbN1_11170 PF00815 Histidinol dehydrogenase pbN1_11180 PF01634 ATP phosphoribosyltransferase pbN1_11190 PF01272 Transcription elongation factor, GreA/GreB, C-term pbN1_11190 PF14760 Rnk N-terminus pbN1_11200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) pbN1_11220 PF01061 ABC-2 type transporter pbN1_11230 PF00005 ABC transporter pbN1_11260 PF04333 MlaA lipoprotein pbN1_11270 PF02470 MlaD protein pbN1_11280 PF02405 Permease MlaE pbN1_11290 PF00005 ABC transporter pbN1_11300 PF02080 TrkA-C domain pbN1_11300 PF02254 TrkA-N domain pbN1_11300 PF00999 Sodium/hydrogen exchanger family pbN1_11310 PF00571 CBS domain pbN1_11310 PF01380 SIS domain pbN1_11340 PF03968 OstA-like protein pbN1_11350 PF00378 Enoyl-CoA hydratase/isomerase pbN1_11370 PF01553 Acyltransferase pbN1_11390 PF05746 DALR anticodon binding domain pbN1_11390 PF02092 Glycyl-tRNA synthetase beta subunit pbN1_11400 PF02091 Glycyl-tRNA synthetase alpha subunit pbN1_11410 PF00795 Carbon-nitrogen hydrolase pbN1_11420 PF03471 Transporter associated domain pbN1_11420 PF00571 CBS domain pbN1_11430 PF02130 Uncharacterized protein family UPF0054 pbN1_11440 PF02562 PhoH-like protein pbN1_11450 PF00919 Uncharacterized protein family UPF0004 pbN1_11450 PF01938 TRAM domain pbN1_11450 PF04055 Radical SAM superfamily pbN1_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_11470 PF03466 LysR substrate binding domain pbN1_11480 PF07883 Cupin domain pbN1_11490 PF01557 Fumarylacetoacetate (FAA) hydrolase family pbN1_11500 PF01494 FAD binding domain pbN1_11510 PF13417 Glutathione S-transferase, N-terminal domain pbN1_11530 PF03466 LysR substrate binding domain pbN1_11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_11540 PF06779 Uncharacterised MFS-type transporter YbfB pbN1_11560 PF18075 FtsX extracellular domain pbN1_11570 PF00005 ABC transporter pbN1_11580 PF00448 SRP54-type protein, GTPase domain pbN1_11580 PF02881 SRP54-type protein, helical bundle domain pbN1_11590 PF00675 Insulinase (Peptidase family M16) pbN1_11590 PF05193 Peptidase M16 inactive domain pbN1_11620 PF01467 Cytidylyltransferase-like pbN1_11630 PF00037 4Fe-4S binding domain pbN1_11640 PF00350 Dynamin family pbN1_11650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain pbN1_11650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain pbN1_11650 PF06827 Zinc finger found in FPG and IleRS pbN1_11670 PF03550 Outer membrane lipoprotein LolB pbN1_11680 PF00288 GHMP kinases N terminal domain pbN1_11680 PF08544 GHMP kinases C terminal pbN1_11690 PF14572 Phosphoribosyl synthetase-associated domain pbN1_11690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase pbN1_11700 PF01386 Ribosomal L25p family pbN1_11700 PF14693 Ribosomal protein TL5, C-terminal domain pbN1_11710 PF01195 Peptidyl-tRNA hydrolase pbN1_11720 PF01926 50S ribosome-binding GTPase pbN1_11720 PF06071 Protein of unknown function (DUF933) pbN1_11760 PF00535 Glycosyl transferase family 2 pbN1_11780 PF00749 tRNA synthetases class I (E and Q), catalytic domain pbN1_11810 PF13091 PLD-like domain pbN1_11820 PF03372 Endonuclease/Exonuclease/phosphatase family pbN1_11830 PF02445 Quinolinate synthetase A protein pbN1_11850 PF00120 Glutamine synthetase, catalytic domain pbN1_11850 PF03951 Glutamine synthetase, beta-Grasp domain pbN1_11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_11870 PF00512 His Kinase A (phospho-acceptor) domain pbN1_11870 PF00989 PAS fold pbN1_11880 PF00158 Sigma-54 interaction domain pbN1_11880 PF02954 Bacterial regulatory protein, Fis family pbN1_11880 PF00072 Response regulator receiver domain pbN1_11890 PF02237 Biotin protein ligase C terminal domain pbN1_11890 PF03099 Biotin/lipoate A/B protein ligase family pbN1_11900 PF03309 Type III pantothenate kinase pbN1_11910 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_11930 PF01121 Dephospho-CoA kinase pbN1_11940 PF07072 Cell division protein pbN1_11950 PF03884 DNA gyrase inhibitor YacG pbN1_11960 PF00293 NUDIX domain pbN1_12000 PF13098 Thioredoxin-like domain pbN1_12000 PF10411 Disulfide bond isomerase protein N-terminus pbN1_12010 PF01494 FAD binding domain pbN1_12020 PF03796 DnaB-like helicase C terminal domain pbN1_12020 PF00772 DnaB-like helicase N terminal domain pbN1_12030 PF03948 Ribosomal protein L9, C-terminal domain pbN1_12030 PF01281 Ribosomal protein L9, N-terminal domain pbN1_12040 PF01084 Ribosomal protein S18 pbN1_12060 PF01250 Ribosomal protein S6 pbN1_12070 PF00271 Helicase conserved C-terminal domain pbN1_12070 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold pbN1_12070 PF00270 DEAD/DEAH box helicase pbN1_12070 PF11898 Domain of unknown function (DUF3418) pbN1_12070 PF04408 Helicase associated domain (HA2) pbN1_12100 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_12100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family pbN1_12110 PF02537 CrcB-like protein, Camphor Resistance (CrcB) pbN1_12140 PF00749 tRNA synthetases class I (E and Q), catalytic domain pbN1_12140 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain pbN1_12150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_12160 PF00005 ABC transporter pbN1_12160 PF12704 MacB-like periplasmic core domain pbN1_12160 PF02687 FtsX-like permease family pbN1_12170 PF00005 ABC transporter pbN1_12170 PF02687 FtsX-like permease family pbN1_12170 PF12704 MacB-like periplasmic core domain pbN1_12180 PF02687 FtsX-like permease family pbN1_12180 PF00005 ABC transporter pbN1_12180 PF12704 MacB-like periplasmic core domain pbN1_12200 PF01479 S4 domain pbN1_12200 PF00849 RNA pseudouridylate synthase pbN1_12210 PF03334 Na+/H+ antiporter subunit pbN1_12220 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) pbN1_12240 PF00361 Proton-conducting membrane transporter pbN1_12250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L pbN1_12260 PF13244 Domain of unknown function (DUF4040) pbN1_12260 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter pbN1_12260 PF00361 Proton-conducting membrane transporter pbN1_12260 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus pbN1_12280 PF02589 LUD domain pbN1_12300 PF13183 4Fe-4S dicluster domain pbN1_12300 PF02589 LUD domain pbN1_12300 PF11870 Domain of unknown function (DUF3390) pbN1_12310 PF02754 Cysteine-rich domain pbN1_12320 PF09339 IclR helix-turn-helix domain pbN1_12320 PF01614 Bacterial transcriptional regulator pbN1_12330 PF00768 D-alanyl-D-alanine carboxypeptidase pbN1_12360 PF03949 Malic enzyme, NAD binding domain pbN1_12360 PF01515 Phosphate acetyl/butaryl transferase pbN1_12360 PF00390 Malic enzyme, N-terminal domain pbN1_12370 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain pbN1_12370 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain pbN1_12380 PF08448 PAS fold pbN1_12380 PF08447 PAS fold pbN1_12380 PF00563 EAL domain pbN1_12380 PF00990 Diguanylate cyclase, GGDEF domain pbN1_12390 PF13977 BetI-type transcriptional repressor, C-terminal pbN1_12390 PF00440 Bacterial regulatory proteins, tetR family pbN1_12410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_12410 PF00529 HlyD membrane-fusion protein of T1SS pbN1_12420 PF00873 AcrB/AcrD/AcrF family pbN1_12430 PF02321 Outer membrane efflux protein pbN1_12460 PF00210 Ferritin-like domain pbN1_12470 PF00012 Hsp70 protein pbN1_12480 PF00012 Hsp70 protein pbN1_12520 PF12706 Beta-lactamase superfamily domain pbN1_12530 PF03070 TENA/THI-4/PQQC family pbN1_12540 PF08042 PqqA family pbN1_12550 PF05402 Coenzyme PQQ synthesis protein D (PqqD) pbN1_12560 PF00561 alpha/beta hydrolase fold pbN1_12600 PF00593 TonB dependent receptor pbN1_12600 PF07715 TonB-dependent Receptor Plug Domain pbN1_12610 PF13186 Iron-sulfur cluster-binding domain pbN1_12610 PF04055 Radical SAM superfamily pbN1_12640 PF00266 Aminotransferase class-V pbN1_12650 PF01180 Dihydroorotate dehydrogenase pbN1_12660 PF00563 EAL domain pbN1_12660 PF03707 Bacterial signalling protein N terminal repeat pbN1_12660 PF00990 Diguanylate cyclase, GGDEF domain pbN1_12670 PF18158 Adaptive response protein AidB N-terminal domain pbN1_12670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_12670 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_12690 PF08808 RES domain pbN1_12700 PF03595 Voltage-dependent anion channel pbN1_12750 PF07963 Prokaryotic N-terminal methylation motif pbN1_12750 PF00114 Pilin (bacterial filament) pbN1_12810 PF08681 Protein of unknown function (DUF1778) pbN1_12850 PF09957 Bacterial antitoxin of type II TA system, VapB pbN1_12910 PF00293 NUDIX domain pbN1_12910 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain pbN1_12910 PF09297 NADH pyrophosphatase zinc ribbon domain pbN1_12920 PF00672 HAMP domain pbN1_12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_12920 PF00512 His Kinase A (phospho-acceptor) domain pbN1_12930 PF00486 Transcriptional regulatory protein, C terminal pbN1_12930 PF00072 Response regulator receiver domain pbN1_12980 PF00196 Bacterial regulatory proteins, luxR family pbN1_12980 PF17874 MalT-like TPR region pbN1_13030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_13030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_13030 PF00378 Enoyl-CoA hydratase/isomerase pbN1_13040 PF17932 Tetracyclin repressor-like, C-terminal domain pbN1_13040 PF00440 Bacterial regulatory proteins, tetR family pbN1_13050 PF07729 FCD domain pbN1_13050 PF00392 Bacterial regulatory proteins, gntR family pbN1_13070 PF00501 AMP-binding enzyme pbN1_13070 PF13193 AMP-binding enzyme C-terminal domain pbN1_13080 PF01968 Hydantoinase/oxoprolinase pbN1_13080 PF05378 Hydantoinase/oxoprolinase N-terminal region pbN1_13090 PF02538 Hydantoinase B/oxoprolinase pbN1_13100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_13100 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_13100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_13110 PF02310 B12 binding domain pbN1_13110 PF01642 Methylmalonyl-CoA mutase pbN1_13120 PF02310 B12 binding domain pbN1_13120 PF01642 Methylmalonyl-CoA mutase pbN1_13130 PF03450 CO dehydrogenase flavoprotein C-terminal domain pbN1_13130 PF00941 FAD binding domain in molybdopterin dehydrogenase pbN1_13140 PF01799 [2Fe-2S] binding domain pbN1_13140 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_13150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase pbN1_13150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain pbN1_13160 PF02515 CoA-transferase family III pbN1_13220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component pbN1_13230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component pbN1_13240 PF03480 Bacterial extracellular solute-binding protein, family 7 pbN1_13290 PF00534 Glycosyl transferases group 1 pbN1_13290 PF13439 Glycosyltransferase Family 4 pbN1_13380 PF12804 MobA-like NTP transferase domain pbN1_13380 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_13390 PF13478 XdhC Rossmann domain pbN1_13390 PF02625 XdhC and CoxI family pbN1_13420 PF01042 Endoribonuclease L-PSP pbN1_13430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family pbN1_13430 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_13450 PF12833 Helix-turn-helix domain pbN1_13450 PF14525 AraC-binding-like domain pbN1_13480 PF13005 zinc-finger binding domain of transposase IS66 pbN1_13480 PF03050 Transposase IS66 family pbN1_13480 PF13817 IS66 C-terminal element pbN1_13480 PF13007 Transposase C of IS166 homeodomain pbN1_13490 PF13247 4Fe-4S dicluster domain pbN1_13490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_13490 PF12837 4Fe-4S binding domain pbN1_13500 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_13510 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II pbN1_13510 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg pbN1_13520 PF00037 4Fe-4S binding domain pbN1_13530 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase pbN1_13540 PF04199 Putative cyclase pbN1_13550 PF02634 FdhD/NarQ family pbN1_13570 PF12800 4Fe-4S binding domain pbN1_13570 PF13247 4Fe-4S dicluster domain pbN1_13580 PF00384 Molybdopterin oxidoreductase pbN1_13580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_13580 PF01568 Molydopterin dinucleotide binding domain pbN1_13610 PF01555 DNA methylase pbN1_13660 PF00271 Helicase conserved C-terminal domain pbN1_13660 PF00176 SNF2 family N-terminal domain pbN1_13810 PF00589 Phage integrase family pbN1_13810 PF02899 Phage integrase, N-terminal SAM-like domain pbN1_13840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain pbN1_13840 PF07685 CobB/CobQ-like glutamine amidotransferase domain pbN1_13850 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP pbN1_13850 PF12557 Cob(I)alamin adenosyltransferase N terminal pbN1_13860 PF00155 Aminotransferase class I and II pbN1_13870 PF03186 CobD/Cbib protein pbN1_13870 PF17113 Regulatory signalling modulator protein AmpE pbN1_13880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_13880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain pbN1_13900 PF01890 Cobalamin synthesis G C-terminus pbN1_13900 PF11760 Cobalamin synthesis G N-terminal pbN1_13900 PF11761 Cobalamin biosynthesis central region pbN1_13910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_13920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_13930 PF01888 CbiD pbN1_13940 PF02570 Precorrin-8X methylmutase pbN1_13950 PF01903 CbiX pbN1_13960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_13980 PF04055 Radical SAM superfamily pbN1_14000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain pbN1_14000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase pbN1_14010 PF01799 [2Fe-2S] binding domain pbN1_14010 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_14040 PF08448 PAS fold pbN1_14040 PF03705 CheR methyltransferase, all-alpha domain pbN1_14040 PF01739 CheR methyltransferase, SAM binding domain pbN1_14040 PF01339 CheB methylesterase pbN1_14050 PF03707 Bacterial signalling protein N terminal repeat pbN1_14050 PF00990 Diguanylate cyclase, GGDEF domain pbN1_14050 PF00563 EAL domain pbN1_14060 PF17284 Spermidine synthase tetramerisation domain pbN1_14100 PF01494 FAD binding domain pbN1_14130 PF00529 HlyD membrane-fusion protein of T1SS pbN1_14130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_14140 PF00873 AcrB/AcrD/AcrF family pbN1_14170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_14180 PF00873 AcrB/AcrD/AcrF family pbN1_14220 PF04945 YHS domain pbN1_14260 PF11525 Copper resistance protein K pbN1_14270 PF00676 Dehydrogenase E1 component pbN1_14280 PF02780 Transketolase, C-terminal domain pbN1_14280 PF02779 Transketolase, pyrimidine binding domain pbN1_14290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) pbN1_14290 PF00364 Biotin-requiring enzyme pbN1_14290 PF02817 e3 binding domain pbN1_14300 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding pbN1_14300 PF18381 YcaO cyclodehydratase C-terminal domain pbN1_14310 PF00378 Enoyl-CoA hydratase/isomerase pbN1_14320 PF13380 CoA binding domain pbN1_14320 PF13607 Succinyl-CoA ligase like flavodoxin domain pbN1_14360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_14360 PF03466 LysR substrate binding domain pbN1_14400 PF04333 MlaA lipoprotein pbN1_14440 PF00849 RNA pseudouridylate synthase pbN1_14470 PF05433 Glycine zipper 2TM domain pbN1_14480 PF01420 Type I restriction modification DNA specificity domain pbN1_14500 PF01380 SIS domain pbN1_14510 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_14510 PF12804 MobA-like NTP transferase domain pbN1_14520 PF01515 Phosphate acetyl/butaryl transferase pbN1_14530 PF00871 Acetokinase family pbN1_14540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster pbN1_14540 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_14550 PF01493 GXGXG motif pbN1_14550 PF01645 Conserved region in glutamate synthase pbN1_14550 PF00310 Glutamine amidotransferases class-II pbN1_14550 PF04898 Glutamate synthase central domain pbN1_14570 PF01966 HD domain pbN1_14570 PF13286 Phosphohydrolase-associated domain pbN1_14580 PF01761 3-dehydroquinate synthase pbN1_14590 PF01202 Shikimate kinase pbN1_14600 PF00263 Bacterial type II and III secretion system protein pbN1_14600 PF03958 Bacterial type II/III secretion system short domain pbN1_14600 PF11741 AMIN domain pbN1_14600 PF07660 Secretin and TonB N terminus short domain pbN1_14620 PF04350 Pilus assembly protein, PilO pbN1_14630 PF05137 Fimbrial assembly protein (PilN) pbN1_14640 PF11104 Type IV pilus assembly protein PilM; pbN1_14650 PF17092 Penicillin-binding protein OB-like domain pbN1_14650 PF00912 Transglycosylase pbN1_14650 PF00905 Penicillin binding protein transpeptidase domain pbN1_14660 PF01491 Frataxin-like domain pbN1_14680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain pbN1_14680 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain pbN1_14700 PF04321 RmlD substrate binding domain pbN1_14710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase pbN1_14720 PF00483 Nucleotidyl transferase pbN1_14730 PF16363 GDP-mannose 4,6 dehydratase pbN1_14740 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family pbN1_14760 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase pbN1_14800 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family pbN1_14820 PF01040 UbiA prenyltransferase family pbN1_14830 PF04345 Chorismate lyase pbN1_14840 PF00270 DEAD/DEAH box helicase pbN1_14840 PF00271 Helicase conserved C-terminal domain pbN1_14840 PF17191 RecG wedge domain pbN1_14850 PF01042 Endoribonuclease L-PSP pbN1_14880 PF03358 NADPH-dependent FMN reductase pbN1_14890 PF05726 Pirin C-terminal cupin domain pbN1_14890 PF02678 Pirin pbN1_14970 PF05016 ParE toxin of type II toxin-antitoxin system, parDE pbN1_14980 PF00378 Enoyl-CoA hydratase/isomerase pbN1_14990 PF00108 Thiolase, N-terminal domain pbN1_14990 PF02803 Thiolase, C-terminal domain pbN1_15000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_15000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_15000 PF00378 Enoyl-CoA hydratase/isomerase pbN1_15010 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) pbN1_15020 PF03061 Thioesterase superfamily pbN1_15030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_15030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_15030 PF00378 Enoyl-CoA hydratase/isomerase pbN1_15040 PF00108 Thiolase, N-terminal domain pbN1_15040 PF02803 Thiolase, C-terminal domain pbN1_15050 PF09317 Domain of unknown function (DUF1974) pbN1_15050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_15050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_15080 PF01553 Acyltransferase pbN1_15160 PF00005 ABC transporter pbN1_15160 PF00664 ABC transporter transmembrane region pbN1_15190 PF07282 Putative transposase DNA-binding domain pbN1_15190 PF12323 Helix-turn-helix domain pbN1_15190 PF01385 Probable transposase pbN1_15210 PF04221 RelB antitoxin pbN1_15240 PF02254 TrkA-N domain pbN1_15240 PF00999 Sodium/hydrogen exchanger family pbN1_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_15250 PF03466 LysR substrate binding domain pbN1_15260 PF01925 Sulfite exporter TauE/SafE pbN1_15290 PF01507 Phosphoadenosine phosphosulfate reductase family pbN1_15310 PF01507 Phosphoadenosine phosphosulfate reductase family pbN1_15320 PF00009 Elongation factor Tu GTP binding domain pbN1_15350 PF01145 SPFH domain / Band 7 family pbN1_15350 PF16200 C-terminal region of band_7 pbN1_15360 PF00970 Oxidoreductase FAD-binding domain pbN1_15360 PF00175 Oxidoreductase NAD-binding domain pbN1_15380 PF10431 C-terminal, D2-small domain, of ClpB protein pbN1_15380 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_15380 PF07724 AAA domain (Cdc48 subfamily) pbN1_15390 PF00227 Proteasome subunit pbN1_15410 PF03061 Thioesterase superfamily pbN1_15420 PF01618 MotA/TolQ/ExbB proton channel family pbN1_15430 PF02472 Biopolymer transport protein ExbD/TolR pbN1_15450 PF04052 TolB amino-terminal domain pbN1_15450 PF07676 WD40-like Beta Propeller Repeat pbN1_15460 PF00691 OmpA family pbN1_15470 PF16331 TolA binding protein trimerisation pbN1_15470 PF13174 Tetratricopeptide repeat pbN1_15480 PF04055 Radical SAM superfamily pbN1_15490 PF06508 Queuosine biosynthesis protein QueC pbN1_15580 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system pbN1_15590 PF13356 Arm DNA-binding domain pbN1_15590 PF00589 Phage integrase family pbN1_15610 PF00072 Response regulator receiver domain pbN1_15610 PF00486 Transcriptional regulatory protein, C terminal pbN1_15620 PF00072 Response regulator receiver domain pbN1_15620 PF13188 PAS domain pbN1_15620 PF00512 His Kinase A (phospho-acceptor) domain pbN1_15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_15620 PF08448 PAS fold pbN1_15630 PF13193 AMP-binding enzyme C-terminal domain pbN1_15630 PF00501 AMP-binding enzyme pbN1_15640 PF12399 Branched-chain amino acid ATP-binding cassette transporter pbN1_15640 PF00005 ABC transporter pbN1_15650 PF00005 ABC transporter pbN1_15670 PF02653 Branched-chain amino acid transport system / permease component pbN1_15730 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain pbN1_15730 PF01565 FAD binding domain pbN1_15740 PF00586 AIR synthase related protein, N-terminal domain pbN1_15740 PF02769 AIR synthase related protein, C-terminal domain pbN1_15750 PF04608 Phosphatidylglycerophosphatase A pbN1_15760 PF02464 Competence-damaged protein pbN1_15770 PF00154 recA bacterial DNA recombination protein pbN1_15780 PF02631 RecX family pbN1_15790 PF00005 ABC transporter pbN1_15790 PF12399 Branched-chain amino acid ATP-binding cassette transporter pbN1_15800 PF04552 Sigma-54, DNA binding domain pbN1_15800 PF04963 Sigma-54 factor, core binding domain pbN1_15800 PF00309 Sigma-54 factor, Activator interacting domain (AID) pbN1_15810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein pbN1_15820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 pbN1_15830 PF02603 HPr Serine kinase N terminus pbN1_15830 PF07475 HPr Serine kinase C-terminal domain pbN1_15840 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_15840 PF00585 C-terminal regulatory domain of Threonine dehydratase pbN1_15850 PF01812 5-formyltetrahydrofolate cyclo-ligase family pbN1_15860 PF01464 Transglycosylase SLT domain pbN1_15860 PF14718 Soluble lytic murein transglycosylase L domain pbN1_15890 PF01966 HD domain pbN1_15890 PF01743 Poly A polymerase head domain pbN1_15890 PF12627 Probable RNA and SrmB- binding site of polymerase A pbN1_15960 PF01171 PP-loop family pbN1_15980 PF09335 SNARE associated Golgi protein pbN1_16030 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase pbN1_16040 PF01695 IstB-like ATP binding protein pbN1_16050 PF00665 Integrase core domain pbN1_16140 PF01695 IstB-like ATP binding protein pbN1_16150 PF00665 Integrase core domain pbN1_16170 PF04002 RadC-like JAB domain pbN1_16310 PF01406 tRNA synthetases class I (C) catalytic domain pbN1_16310 PF09190 DALR domain pbN1_16320 PF13476 AAA domain pbN1_16350 PF02463 RecF/RecN/SMC N terminal domain pbN1_16360 PF00176 SNF2 family N-terminal domain pbN1_16360 PF00271 Helicase conserved C-terminal domain pbN1_16490 PF02885 Glycosyl transferase family, helical bundle domain pbN1_16490 PF00591 Glycosyl transferase family, a/b domain pbN1_16490 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain pbN1_16530 PF06470 SMC proteins Flexible Hinge Domain pbN1_16530 PF02463 RecF/RecN/SMC N terminal domain pbN1_16540 PF00145 C-5 cytosine-specific DNA methylase pbN1_16560 PF03852 DNA mismatch endonuclease Vsr pbN1_16680 PF01609 Transposase DDE domain pbN1_16680 PF05598 Transposase domain (DUF772) pbN1_16720 PF01751 Toprim domain pbN1_16720 PF01131 DNA topoisomerase pbN1_16760 PF01209 ubiE/COQ5 methyltransferase family pbN1_16850 PF13614 AAA domain pbN1_16900 PF03264 NapC/NirT cytochrome c family, N-terminal region pbN1_16910 PF09459 Ethylbenzene dehydrogenase pbN1_16930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_16930 PF00512 His Kinase A (phospho-acceptor) domain pbN1_16950 PF00158 Sigma-54 interaction domain pbN1_16950 PF02954 Bacterial regulatory protein, Fis family pbN1_16950 PF00072 Response regulator receiver domain pbN1_16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_16960 PF00512 His Kinase A (phospho-acceptor) domain pbN1_16980 PF01613 Flavin reductase like domain pbN1_16990 PF10576 Iron-sulfur binding domain of endonuclease III pbN1_16990 PF14815 NUDIX domain pbN1_16990 PF00730 HhH-GPD superfamily base excision DNA repair protein pbN1_16990 PF00633 Helix-hairpin-helix motif pbN1_17000 PF03707 Bacterial signalling protein N terminal repeat pbN1_17000 PF00990 Diguanylate cyclase, GGDEF domain pbN1_17000 PF00563 EAL domain pbN1_17010 PF03458 UPF0126 domain pbN1_17030 PF01741 Large-conductance mechanosensitive channel, MscL pbN1_17040 PF00753 Metallo-beta-lactamase superfamily pbN1_17050 PF03459 TOBE domain pbN1_17050 PF00005 ABC transporter pbN1_17060 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_17080 PF03459 TOBE domain pbN1_17090 PF13538 UvrD-like helicase C-terminal domain pbN1_17100 PF12705 PD-(D/E)XK nuclease superfamily pbN1_17100 PF13361 UvrD-like helicase C-terminal domain pbN1_17100 PF00580 UvrD/REP helicase N-terminal domain pbN1_17110 PF17946 RecC C-terminal domain pbN1_17120 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_17130 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_17140 PF01556 DnaJ C terminal domain pbN1_17140 PF00226 DnaJ domain pbN1_17150 PF00011 Hsp20/alpha crystallin family pbN1_17160 PF00011 Hsp20/alpha crystallin family pbN1_17170 PF00011 Hsp20/alpha crystallin family pbN1_17190 PF02384 N-6 DNA Methylase pbN1_17190 PF12161 HsdM N-terminal domain pbN1_17220 PF00270 DEAD/DEAH box helicase pbN1_17220 PF13749 Putative ATP-dependent DNA helicase recG C-terminal pbN1_17220 PF17191 RecG wedge domain pbN1_17230 PF11867 Domain of unknown function (DUF3387) pbN1_17230 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) pbN1_17230 PF18766 SWI2/SNF2 ATPase pbN1_17300 PF12838 4Fe-4S dicluster domain pbN1_17300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_17300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region pbN1_17300 PF01568 Molydopterin dinucleotide binding domain pbN1_17300 PF00384 Molybdopterin oxidoreductase pbN1_17310 PF10531 SLBB domain pbN1_17310 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit pbN1_17310 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region pbN1_17320 PF00301 Rubredoxin pbN1_17360 PF13193 AMP-binding enzyme C-terminal domain pbN1_17360 PF00501 AMP-binding enzyme pbN1_17380 PF00171 Aldehyde dehydrogenase family pbN1_17390 PF01202 Shikimate kinase pbN1_17400 PF00378 Enoyl-CoA hydratase/isomerase pbN1_17420 PF00037 4Fe-4S binding domain pbN1_17420 PF00970 Oxidoreductase FAD-binding domain pbN1_17420 PF00175 Oxidoreductase NAD-binding domain pbN1_17430 PF00108 Thiolase, N-terminal domain pbN1_17430 PF02803 Thiolase, C-terminal domain pbN1_17460 PF11838 ERAP1-like C-terminal domain pbN1_17460 PF01433 Peptidase family M1 domain pbN1_17470 PF01136 Peptidase family U32 pbN1_17470 PF16325 Peptidase family U32 C-terminal domain pbN1_17490 PF12848 ABC transporter pbN1_17490 PF00005 ABC transporter pbN1_17500 PF02028 BCCT, betaine/carnitine/choline family transporter pbN1_17510 PF03830 PTS system sorbose subfamily IIB component pbN1_17510 PF03610 PTS system fructose IIA component pbN1_17520 PF00381 PTS HPr component phosphorylation site pbN1_17530 PF05524 PEP-utilising enzyme, N-terminal pbN1_17530 PF02896 PEP-utilising enzyme, TIM barrel domain pbN1_17530 PF00391 PEP-utilising enzyme, mobile domain pbN1_17560 PF09345 Domain of unknown function (DUF1987) pbN1_17570 PF00990 Diguanylate cyclase, GGDEF domain pbN1_17580 PF00561 alpha/beta hydrolase fold pbN1_17590 PF07021 Methionine biosynthesis protein MetW pbN1_17590 PF00561 alpha/beta hydrolase fold pbN1_17620 PF03707 Bacterial signalling protein N terminal repeat pbN1_17620 PF00563 EAL domain pbN1_17620 PF00990 Diguanylate cyclase, GGDEF domain pbN1_17630 PF07690 Major Facilitator Superfamily pbN1_17650 PF00484 Carbonic anhydrase pbN1_17660 PF00270 DEAD/DEAH box helicase pbN1_17660 PF00271 Helicase conserved C-terminal domain pbN1_17660 PF18319 PriA DNA helicase Cys-rich region (CRR) domain pbN1_17660 PF18074 Primosomal protein N C-terminal domain pbN1_17660 PF17764 3′ DNA-binding domain (3′BD) pbN1_17680 PF01208 Uroporphyrinogen decarboxylase (URO-D) pbN1_17690 PF02386 Cation transport protein pbN1_17700 PF02080 TrkA-C domain pbN1_17700 PF02254 TrkA-N domain pbN1_17710 PF02954 Bacterial regulatory protein, Fis family pbN1_17710 PF00158 Sigma-54 interaction domain pbN1_17710 PF00072 Response regulator receiver domain pbN1_17720 PF00672 HAMP domain pbN1_17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_17720 PF00989 PAS fold pbN1_17720 PF00512 His Kinase A (phospho-acceptor) domain pbN1_17740 PF01029 NusB family pbN1_17740 PF01189 16S rRNA methyltransferase RsmB/F pbN1_17760 PF01925 Sulfite exporter TauE/SafE pbN1_17770 PF12631 MnmE helical domain pbN1_17770 PF01926 50S ribosome-binding GTPase pbN1_17770 PF10396 GTP-binding protein TrmE N-terminus pbN1_17780 PF14849 YidC periplasmic domain pbN1_17780 PF02096 60Kd inner membrane protein pbN1_17790 PF01809 Putative membrane protein insertion efficiency factor pbN1_17800 PF00825 Ribonuclease P pbN1_17810 PF00308 Bacterial dnaA protein pbN1_17810 PF08299 Bacterial dnaA protein helix-turn-helix pbN1_17810 PF11638 DnaA N-terminal domain pbN1_17820 PF00712 DNA polymerase III beta subunit, N-terminal domain pbN1_17820 PF02767 DNA polymerase III beta subunit, central domain pbN1_17820 PF02768 DNA polymerase III beta subunit, C-terminal domain pbN1_17830 PF01751 Toprim domain pbN1_17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_17830 PF00986 DNA gyrase B subunit, carboxyl terminus pbN1_17830 PF18053 DNA gyrase B subunit insert domain pbN1_17830 PF00204 DNA gyrase B pbN1_17850 PF00271 Helicase conserved C-terminal domain pbN1_17850 PF08463 EcoEI R protein C-terminal pbN1_17850 PF04851 Type III restriction enzyme, res subunit pbN1_17850 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) pbN1_17860 PF02384 N-6 DNA Methylase pbN1_17860 PF12161 HsdM N-terminal domain pbN1_17870 PF06250 YhcG PDDEXK nuclease domain pbN1_17870 PF17761 DUF1016 N-terminal domain pbN1_17900 PF01738 Dienelactone hydrolase family pbN1_17900 PF00156 Phosphoribosyl transferase domain pbN1_17910 PF01906 Putative heavy-metal-binding pbN1_17920 PF12848 ABC transporter pbN1_17920 PF00005 ABC transporter pbN1_17930 PF05951 Bacterial protein of unknown function (DUF882) pbN1_17940 PF01471 Putative peptidoglycan binding domain pbN1_17940 PF03734 L,D-transpeptidase catalytic domain pbN1_17960 PF08447 PAS fold pbN1_17960 PF13426 PAS domain pbN1_17960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_17970 PF00563 EAL domain pbN1_17970 PF00990 Diguanylate cyclase, GGDEF domain pbN1_17970 PF03707 Bacterial signalling protein N terminal repeat pbN1_18010 PF00753 Metallo-beta-lactamase superfamily pbN1_18020 PF17762 HTH domain found in ParB protein pbN1_18020 PF02195 ParB-like nuclease domain pbN1_18030 PF13614 AAA domain pbN1_18040 PF02527 rRNA small subunit methyltransferase G pbN1_18050 PF01134 Glucose inhibited division protein A pbN1_18050 PF13932 GidA associated domain pbN1_18070 PF08534 Redoxin pbN1_18080 PF01292 Prokaryotic cytochrome b561 pbN1_18100 PF13247 4Fe-4S dicluster domain pbN1_18110 PF00384 Molybdopterin oxidoreductase pbN1_18110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_18110 PF01568 Molydopterin dinucleotide binding domain pbN1_18170 PF02634 FdhD/NarQ family pbN1_18180 PF12804 MobA-like NTP transferase domain pbN1_18190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_18190 PF08447 PAS fold pbN1_18200 PF03205 Molybdopterin guanine dinucleotide synthesis protein B pbN1_18220 PF01435 Peptidase family M48 pbN1_18230 PF02911 Formyl transferase, C-terminal domain pbN1_18230 PF00551 Formyl transferase pbN1_18240 PF01327 Polypeptide deformylase pbN1_18250 PF01476 LysM domain pbN1_18260 PF02481 DNA recombination-mediator protein A pbN1_18260 PF17782 DprA winged helix domain pbN1_18270 PF04361 Protein of unknown function (DUF494) pbN1_18280 PF01131 DNA topoisomerase pbN1_18280 PF01751 Toprim domain pbN1_18290 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_18290 PF18113 Rubredoxin binding C-terminal domain pbN1_18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_18300 PF03466 LysR substrate binding domain pbN1_18320 PF13180 PDZ domain pbN1_18320 PF17820 PDZ domain pbN1_18330 PF17760 UvrA interaction domain pbN1_18330 PF17755 UvrA DNA-binding domain pbN1_18330 PF00005 ABC transporter pbN1_18350 PF01132 Elongation factor P (EF-P) OB domain pbN1_18350 PF08207 Elongation factor P (EF-P) KOW-like domain pbN1_18350 PF09285 Elongation factor P, C-terminal pbN1_18370 PF00849 RNA pseudouridylate synthase pbN1_18370 PF01479 S4 domain pbN1_18390 PF04381 Putative exonuclease, RdgC pbN1_18400 PF03707 Bacterial signalling protein N terminal repeat pbN1_18400 PF00990 Diguanylate cyclase, GGDEF domain pbN1_18400 PF00563 EAL domain pbN1_18410 PF00072 Response regulator receiver domain pbN1_18420 PF00512 His Kinase A (phospho-acceptor) domain pbN1_18420 PF08446 PAS fold pbN1_18420 PF00360 Phytochrome region pbN1_18420 PF01590 GAF domain pbN1_18420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_18430 PF09084 NMT1/THI5 like pbN1_18440 PF02515 CoA-transferase family III pbN1_18450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_18450 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_18450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_18460 PF03466 LysR substrate binding domain pbN1_18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_18470 PF00171 Aldehyde dehydrogenase family pbN1_18480 PF11871 Domain of unknown function (DUF3391) pbN1_18480 PF01966 HD domain pbN1_18500 PF00119 ATP synthase A chain pbN1_18510 PF00137 ATP synthase subunit C pbN1_18520 PF00430 ATP synthase B/B' CF(0) pbN1_18530 PF00213 ATP synthase delta (OSCP) subunit pbN1_18540 PF02874 ATP synthase alpha/beta family, beta-barrel domain pbN1_18540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain pbN1_18540 PF00306 ATP synthase alpha/beta chain, C terminal domain pbN1_18550 PF00231 ATP synthase pbN1_18560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain pbN1_18560 PF02874 ATP synthase alpha/beta family, beta-barrel domain pbN1_18570 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain pbN1_18570 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain pbN1_18600 PF01209 ubiE/COQ5 methyltransferase family pbN1_18620 PF00072 Response regulator receiver domain pbN1_18620 PF00486 Transcriptional regulatory protein, C terminal pbN1_18650 PF13230 Glutamine amidotransferases class-II pbN1_18660 PF02637 GatB domain pbN1_18660 PF02934 GatB/GatE catalytic domain pbN1_18670 PF01425 Amidase pbN1_18680 PF02686 Glu-tRNAGln amidotransferase C subunit pbN1_18720 PF03717 Penicillin-binding Protein dimerisation domain pbN1_18720 PF00905 Penicillin binding protein transpeptidase domain pbN1_18730 PF01098 Cell cycle protein pbN1_18740 PF03330 Lytic transglycolase pbN1_18740 PF05036 Sporulation related domain pbN1_18750 PF00768 D-alanyl-D-alanine carboxypeptidase pbN1_18750 PF07943 Penicillin-binding protein 5, C-terminal domain pbN1_18760 PF01063 Amino-transferase class IV pbN1_18770 PF04359 Protein of unknown function (DUF493) pbN1_18780 PF03099 Biotin/lipoate A/B protein ligase family pbN1_18790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family pbN1_18790 PF04055 Radical SAM superfamily pbN1_18800 PF01258 Prokaryotic dksA/traR C4-type zinc finger pbN1_18810 PF00580 UvrD/REP helicase N-terminal domain pbN1_18810 PF13361 UvrD-like helicase C-terminal domain pbN1_18830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III pbN1_18840 PF04972 BON domain pbN1_18840 PF01476 LysM domain pbN1_18850 PF05724 Thiopurine S-methyltransferase (TPMT) pbN1_18890 PF04286 Protein of unknown function (DUF445) pbN1_18900 PF05036 Sporulation related domain pbN1_18900 PF03330 Lytic transglycolase pbN1_18930 PF12320 Type 5 capsule protein repressor C-terminal domain pbN1_18930 PF00149 Calcineurin-like phosphoesterase pbN1_18940 PF07759 Protein of unknown function (DUF1615) pbN1_18950 PF00925 GTP cyclohydrolase II pbN1_18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_18960 PF03466 LysR substrate binding domain pbN1_19030 PF02310 B12 binding domain pbN1_19030 PF02607 B12 binding domain pbN1_19040 PF02219 Methylenetetrahydrofolate reductase pbN1_19090 PF00872 Transposase, Mutator family pbN1_19110 PF14535 AMP-binding enzyme C-terminal domain pbN1_19110 PF00501 AMP-binding enzyme pbN1_19120 PF09297 NADH pyrophosphatase zinc ribbon domain pbN1_19120 PF00293 NUDIX domain pbN1_19120 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain pbN1_19140 PF02441 Flavoprotein pbN1_19150 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase pbN1_19170 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase pbN1_19190 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase pbN1_19200 PF00571 CBS domain pbN1_19210 PF00391 PEP-utilising enzyme, mobile domain pbN1_19210 PF02896 PEP-utilising enzyme, TIM barrel domain pbN1_19210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain pbN1_19220 PF00501 AMP-binding enzyme pbN1_19220 PF13193 AMP-binding enzyme C-terminal domain pbN1_19220 PF00668 Condensation domain pbN1_19220 PF08241 Methyltransferase domain pbN1_19220 PF00391 PEP-utilising enzyme, mobile domain pbN1_19220 PF00550 Phosphopantetheine attachment site pbN1_19220 PF00975 Thioesterase domain pbN1_19230 PF02954 Bacterial regulatory protein, Fis family pbN1_19230 PF00158 Sigma-54 interaction domain pbN1_19230 PF02830 V4R domain pbN1_19230 PF06505 Activator of aromatic catabolism pbN1_19260 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase pbN1_19260 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II pbN1_19260 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg pbN1_19270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_19280 PF00909 Ammonium Transporter Family pbN1_19290 PF00543 Nitrogen regulatory protein P-II pbN1_19320 PF01078 Magnesium chelatase, subunit ChlI pbN1_19320 PF13335 Magnesium chelatase, subunit ChlI C-terminal pbN1_19330 PF07690 Major Facilitator Superfamily pbN1_19340 PF00005 ABC transporter pbN1_19350 PF00005 ABC transporter pbN1_19350 PF12399 Branched-chain amino acid ATP-binding cassette transporter pbN1_19360 PF11862 Domain of unknown function (DUF3382) pbN1_19360 PF02653 Branched-chain amino acid transport system / permease component pbN1_19370 PF02653 Branched-chain amino acid transport system / permease component pbN1_19380 PF13458 Periplasmic binding protein pbN1_19390 PF13458 Periplasmic binding protein pbN1_19440 PF01145 SPFH domain / Band 7 family pbN1_19440 PF16200 C-terminal region of band_7 pbN1_19460 PF02965 Vitamin B12 dependent methionine synthase, activation domain pbN1_19460 PF00809 Pterin binding enzyme pbN1_19460 PF02574 Homocysteine S-methyltransferase pbN1_19460 PF02607 B12 binding domain pbN1_19460 PF02310 B12 binding domain pbN1_19470 PF01226 Formate/nitrite transporter pbN1_19480 PF00970 Oxidoreductase FAD-binding domain pbN1_19480 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_19480 PF00175 Oxidoreductase NAD-binding domain pbN1_19520 PF00072 Response regulator receiver domain pbN1_19540 PF14572 Phosphoribosyl synthetase-associated domain pbN1_19540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase pbN1_19550 PF07075 Protein of unknown function (DUF1343) pbN1_19570 PF07660 Secretin and TonB N terminus short domain pbN1_19570 PF00593 TonB dependent receptor pbN1_19570 PF07715 TonB-dependent Receptor Plug Domain pbN1_19590 PF05433 Glycine zipper 2TM domain pbN1_19600 PF03741 Integral membrane protein TerC family pbN1_19620 PF00009 Elongation factor Tu GTP binding domain pbN1_19620 PF03144 Elongation factor Tu domain 2 pbN1_19620 PF16658 Class II release factor RF3, C-terminal domain pbN1_19630 PF00990 Diguanylate cyclase, GGDEF domain pbN1_19630 PF00563 EAL domain pbN1_19630 PF03707 Bacterial signalling protein N terminal repeat pbN1_19640 PF00665 Integrase core domain pbN1_19650 PF01695 IstB-like ATP binding protein pbN1_19670 PF00158 Sigma-54 interaction domain pbN1_19670 PF01590 GAF domain pbN1_19670 PF02954 Bacterial regulatory protein, Fis family pbN1_19690 PF00665 Integrase core domain pbN1_19700 PF01695 IstB-like ATP binding protein pbN1_19750 PF01867 CRISPR associated protein Cas1 pbN1_19810 PF18395 Cas3 C-terminal domain pbN1_19810 PF18019 HD domain pbN1_19870 PF01494 FAD binding domain pbN1_19920 PF00156 Phosphoribosyl transferase domain pbN1_20010 PF00884 Sulfatase pbN1_20030 PF00486 Transcriptional regulatory protein, C terminal pbN1_20030 PF00072 Response regulator receiver domain pbN1_20040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_20040 PF00512 His Kinase A (phospho-acceptor) domain pbN1_20040 PF08521 Two-component sensor kinase N-terminal pbN1_20050 PF03372 Endonuclease/Exonuclease/phosphatase family pbN1_20060 PF00156 Phosphoribosyl transferase domain pbN1_20080 PF01568 Molydopterin dinucleotide binding domain pbN1_20080 PF00384 Molybdopterin oxidoreductase pbN1_20080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_20090 PF02146 Sir2 family pbN1_20120 PF00665 Integrase core domain pbN1_20130 PF01695 IstB-like ATP binding protein pbN1_20150 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_20160 PF00005 ABC transporter pbN1_20160 PF08402 TOBE domain pbN1_20170 PF07715 TonB-dependent Receptor Plug Domain pbN1_20170 PF00593 TonB dependent receptor pbN1_20170 PF07660 Secretin and TonB N terminus short domain pbN1_20190 PF01497 Periplasmic binding protein pbN1_20200 PF01032 FecCD transport family pbN1_20210 PF00005 ABC transporter pbN1_20220 PF13649 Methyltransferase domain pbN1_20230 PF06968 Biotin and Thiamin Synthesis associated domain pbN1_20230 PF04055 Radical SAM superfamily pbN1_20250 PF01032 FecCD transport family pbN1_20260 PF00005 ABC transporter pbN1_20310 PF01618 MotA/TolQ/ExbB proton channel family pbN1_20320 PF02472 Biopolymer transport protein ExbD/TolR pbN1_20340 PF04891 NifQ pbN1_20350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_20350 PF03459 TOBE domain pbN1_20360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_20360 PF03466 LysR substrate binding domain pbN1_20450 PF00665 Integrase core domain pbN1_20460 PF01695 IstB-like ATP binding protein pbN1_20470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) pbN1_20470 PF00355 Rieske [2Fe-2S] domain pbN1_20480 PF00866 Ring hydroxylating beta subunit pbN1_20490 PF06139 BphX-like pbN1_20500 PF00355 Rieske [2Fe-2S] domain pbN1_20510 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_20510 PF14759 Reductase C-terminal pbN1_20530 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_20530 PF14759 Reductase C-terminal pbN1_20540 PF00106 short chain dehydrogenase pbN1_20550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily pbN1_20560 PF01557 Fumarylacetoacetate (FAA) hydrolase family pbN1_20570 PF01118 Semialdehyde dehydrogenase, NAD binding domain pbN1_20570 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation pbN1_20580 PF07836 DmpG-like communication domain pbN1_20580 PF00682 HMGL-like pbN1_20590 PF12697 Alpha/beta hydrolase family pbN1_20610 PF00561 alpha/beta hydrolase fold pbN1_20620 PF03466 LysR substrate binding domain pbN1_20620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_20630 PF01381 Helix-turn-helix pbN1_20650 PF13356 Arm DNA-binding domain pbN1_20650 PF00589 Phage integrase family pbN1_20660 PF02597 ThiS family pbN1_20660 PF05690 Thiazole biosynthesis protein ThiG pbN1_20670 PF05690 Thiazole biosynthesis protein ThiG pbN1_20680 PF02390 Putative methyltransferase pbN1_20690 PF01343 Peptidase family S49 pbN1_20710 PF04055 Radical SAM superfamily pbN1_20710 PF06969 HemN C-terminal domain pbN1_20720 PF01725 Ham1 family pbN1_20730 PF01138 3' exoribonuclease family, domain 1 pbN1_20730 PF03725 3' exoribonuclease family, domain 2 pbN1_20750 PF00069 Protein kinase domain pbN1_20760 PF08340 Domain of unknown function (DUF1732) pbN1_20760 PF03755 YicC-like family, N-terminal region pbN1_20770 PF13356 Arm DNA-binding domain pbN1_20770 PF00589 Phage integrase family pbN1_20840 PF13609 Gram-negative porin pbN1_20870 PF12706 Beta-lactamase superfamily domain pbN1_20920 PF12950 TaqI-like C-terminal specificity domain pbN1_20920 PF07669 Eco57I restriction-modification methylase pbN1_20940 PF02951 Prokaryotic glutathione synthetase, N-terminal domain pbN1_20940 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain pbN1_20950 PF02424 ApbE family pbN1_20960 PF00892 EamA-like transporter family pbN1_20970 PF03466 LysR substrate binding domain pbN1_20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_20990 PF01323 DSBA-like thioredoxin domain pbN1_21010 PF12848 ABC transporter pbN1_21010 PF00005 ABC transporter pbN1_21020 PF13291 ACT domain pbN1_21020 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_21040 PF00551 Formyl transferase pbN1_21050 PF00012 Hsp70 protein pbN1_21060 PF00313 'Cold-shock' DNA-binding domain pbN1_21070 PF07690 Major Facilitator Superfamily pbN1_21080 PF12697 Alpha/beta hydrolase family pbN1_21090 PF01841 Transglutaminase-like superfamily pbN1_21100 PF08534 Redoxin pbN1_21110 PF05981 CreA protein pbN1_21120 PF00472 RF-1 domain pbN1_21140 PF01556 DnaJ C terminal domain pbN1_21140 PF00226 DnaJ domain pbN1_21150 PF00625 Guanylate kinase pbN1_21160 PF01192 RNA polymerase Rpb6 pbN1_21170 PF04607 Region found in RelA / SpoT proteins pbN1_21170 PF02824 TGS domain pbN1_21170 PF13291 ACT domain pbN1_21190 PF14480 DNA polymerase III polC-type N-terminus I pbN1_21190 PF11490 DNA polymerase III polC-type N-terminus II pbN1_21190 PF07733 Bacterial DNA polymerase III alpha NTPase domain pbN1_21190 PF14579 Helix-hairpin-helix motif pbN1_21190 PF02811 PHP domain pbN1_21190 PF00929 Exonuclease pbN1_21190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain pbN1_21220 PF00672 HAMP domain pbN1_21220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_21220 PF07730 Histidine kinase pbN1_21220 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term pbN1_21230 PF00072 Response regulator receiver domain pbN1_21230 PF00196 Bacterial regulatory proteins, luxR family pbN1_21250 PF00005 ABC transporter pbN1_21260 PF03379 CcmB protein pbN1_21270 PF01578 Cytochrome C assembly protein pbN1_21290 PF03100 CcmE pbN1_21300 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal pbN1_21300 PF01578 Cytochrome C assembly protein pbN1_21310 PF08534 Redoxin pbN1_21320 PF03918 Cytochrome C biogenesis protein pbN1_21330 PF03918 Cytochrome C biogenesis protein pbN1_21360 PF01168 Alanine racemase, N-terminal domain pbN1_21360 PF00842 Alanine racemase, C-terminal domain pbN1_21390 PF02694 Uncharacterised BCR, YnfA/UPF0060 family pbN1_21400 PF13411 MerR HTH family regulatory protein pbN1_21420 PF00403 Heavy-metal-associated domain pbN1_21440 PF02321 Outer membrane efflux protein pbN1_21450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_21450 PF00529 HlyD membrane-fusion protein of T1SS pbN1_21470 PF00873 AcrB/AcrD/AcrF family pbN1_21490 PF00884 Sulfatase pbN1_21500 PF04341 Protein of unknown function, DUF485 pbN1_21510 PF00474 Sodium:solute symporter family pbN1_21530 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_21540 PF00171 Aldehyde dehydrogenase family pbN1_21550 PF00378 Enoyl-CoA hydratase/isomerase pbN1_21560 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain pbN1_21560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_21560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_21570 PF03061 Thioesterase superfamily pbN1_21580 PF14535 AMP-binding enzyme C-terminal domain pbN1_21580 PF00501 AMP-binding enzyme pbN1_21590 PF05138 Phenylacetic acid catabolic protein pbN1_21600 PF06243 Phenylacetic acid degradation B pbN1_21610 PF05138 Phenylacetic acid catabolic protein pbN1_21620 PF01883 Iron-sulfur cluster assembly protein pbN1_21630 PF00175 Oxidoreductase NAD-binding domain pbN1_21630 PF00970 Oxidoreductase FAD-binding domain pbN1_21630 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_21670 PF00005 ABC transporter pbN1_21670 PF12399 Branched-chain amino acid ATP-binding cassette transporter pbN1_21680 PF00005 ABC transporter pbN1_21690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family pbN1_21700 PF00216 Bacterial DNA-binding protein pbN1_21720 PF00271 Helicase conserved C-terminal domain pbN1_21720 PF00270 DEAD/DEAH box helicase pbN1_21730 PF01029 NusB family pbN1_21740 PF00885 6,7-dimethyl-8-ribityllumazine synthase pbN1_21750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase pbN1_21750 PF00925 GTP cyclohydrolase II pbN1_21760 PF00677 Lumazine binding domain pbN1_21770 PF11412 Disulphide bond corrector protein DsbC pbN1_21770 PF02683 Cytochrome C biogenesis protein transmembrane region pbN1_21800 PF03741 Integral membrane protein TerC family pbN1_21810 PF09350 Domain of unknown function (DUF1992) pbN1_21840 PF01061 ABC-2 type transporter pbN1_21850 PF00005 ABC transporter pbN1_21860 PF13417 Glutathione S-transferase, N-terminal domain pbN1_21860 PF00043 Glutathione S-transferase, C-terminal domain pbN1_21870 PF00561 alpha/beta hydrolase fold pbN1_21900 PF02036 SCP-2 sterol transfer family pbN1_21910 PF01136 Peptidase family U32 pbN1_21920 PF01136 Peptidase family U32 pbN1_21930 PF12849 PBP superfamily domain pbN1_21960 PF03450 CO dehydrogenase flavoprotein C-terminal domain pbN1_21960 PF00941 FAD binding domain in molybdopterin dehydrogenase pbN1_21970 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase pbN1_21970 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain pbN1_21980 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_21980 PF01799 [2Fe-2S] binding domain pbN1_21990 PF00710 Asparaginase, N-terminal pbN1_21990 PF17763 Glutaminase/Asparaginase C-terminal domain pbN1_22000 PF00474 Sodium:solute symporter family pbN1_22010 PF00202 Aminotransferase class-III pbN1_22020 PF03109 ABC1 family pbN1_22030 PF05746 DALR anticodon binding domain pbN1_22030 PF00750 tRNA synthetases class I (R) pbN1_22030 PF03485 Arginyl tRNA synthetase N terminal domain pbN1_22050 PF13462 Thioredoxin pbN1_22070 PF05088 Bacterial NAD-glutamate dehydrogenase pbN1_22080 PF02705 K+ potassium transporter pbN1_22090 PF01262 Alanine dehydrogenase/PNT, C-terminal domain pbN1_22090 PF05222 Alanine dehydrogenase/PNT, N-terminal domain pbN1_22100 PF01497 Periplasmic binding protein pbN1_22120 PF00561 alpha/beta hydrolase fold pbN1_22120 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus pbN1_22140 PF13411 MerR HTH family regulatory protein pbN1_22160 PF00484 Carbonic anhydrase pbN1_22170 PF00108 Thiolase, N-terminal domain pbN1_22170 PF02803 Thiolase, C-terminal domain pbN1_22180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_22180 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_22180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_22190 PF00378 Enoyl-CoA hydratase/isomerase pbN1_22220 PF16123 Hydroxyacylglutathione hydrolase C-terminus pbN1_22220 PF00753 Metallo-beta-lactamase superfamily pbN1_22230 PF03668 P-loop ATPase protein family pbN1_22250 PF08447 PAS fold pbN1_22250 PF13426 PAS domain pbN1_22250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_22260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_22260 PF12837 4Fe-4S binding domain pbN1_22260 PF13247 4Fe-4S dicluster domain pbN1_22270 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_22280 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg pbN1_22280 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II pbN1_22290 PF00037 4Fe-4S binding domain pbN1_22300 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase pbN1_22350 PF00107 Zinc-binding dehydrogenase pbN1_22350 PF08240 Alcohol dehydrogenase GroES-like domain pbN1_22370 PF02075 Crossover junction endodeoxyribonuclease RuvC pbN1_22410 PF00158 Sigma-54 interaction domain pbN1_22410 PF00072 Response regulator receiver domain pbN1_22410 PF02954 Bacterial regulatory protein, Fis family pbN1_22430 PF00115 Cytochrome C and Quinol oxidase polypeptide I pbN1_22460 PF00892 EamA-like transporter family pbN1_22470 PF01709 Transcriptional regulator pbN1_22490 PF10531 SLBB domain pbN1_22510 PF00271 Helicase conserved C-terminal domain pbN1_22510 PF00270 DEAD/DEAH box helicase pbN1_22530 PF01497 Periplasmic binding protein pbN1_22540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain pbN1_22540 PF07685 CobB/CobQ-like glutamine amidotransferase domain pbN1_22550 PF02386 Cation transport protein pbN1_22560 PF00072 Response regulator receiver domain pbN1_22560 PF00486 Transcriptional regulatory protein, C terminal pbN1_22570 PF13493 Domain of unknown function (DUF4118) pbN1_22570 PF02702 Osmosensitive K+ channel His kinase sensor domain pbN1_22570 PF00512 His Kinase A (phospho-acceptor) domain pbN1_22570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_22570 PF13492 GAF domain pbN1_22580 PF00378 Enoyl-CoA hydratase/isomerase pbN1_22590 PF04341 Protein of unknown function, DUF485 pbN1_22600 PF00474 Sodium:solute symporter family pbN1_22640 PF00437 Type II/IV secretion system protein pbN1_22700 PF00263 Bacterial type II and III secretion system protein pbN1_22700 PF04972 BON domain pbN1_22700 PF13629 Pilus formation protein N terminal region pbN1_22760 PF01339 CheB methylesterase pbN1_22760 PF00072 Response regulator receiver domain pbN1_22810 PF00082 Subtilase family pbN1_22840 PF10415 Fumarase C C-terminus pbN1_22840 PF00206 Lyase pbN1_22850 PF07729 FCD domain pbN1_22850 PF00392 Bacterial regulatory proteins, gntR family pbN1_22860 PF01642 Methylmalonyl-CoA mutase pbN1_22860 PF02310 B12 binding domain pbN1_22880 PF01039 Carboxyl transferase domain pbN1_22900 PF02785 Biotin carboxylase C-terminal domain pbN1_22900 PF00289 Biotin carboxylase, N-terminal domain pbN1_22900 PF00364 Biotin-requiring enzyme pbN1_22900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain pbN1_22900 PF18140 Propionyl-coenzyme A carboxylase BT domain pbN1_22930 PF02311 AraC-like ligand binding domain pbN1_22930 PF12833 Helix-turn-helix domain pbN1_22940 PF07690 Major Facilitator Superfamily pbN1_22980 PF00072 Response regulator receiver domain pbN1_22980 PF00486 Transcriptional regulatory protein, C terminal pbN1_22990 PF00072 Response regulator receiver domain pbN1_22990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_22990 PF00512 His Kinase A (phospho-acceptor) domain pbN1_22990 PF13188 PAS domain pbN1_22990 PF08448 PAS fold pbN1_23000 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term pbN1_23000 PF12833 Helix-turn-helix domain pbN1_23010 PF02310 B12 binding domain pbN1_23010 PF01642 Methylmalonyl-CoA mutase pbN1_23030 PF03707 Bacterial signalling protein N terminal repeat pbN1_23030 PF00990 Diguanylate cyclase, GGDEF domain pbN1_23030 PF00563 EAL domain pbN1_23040 PF09335 SNARE associated Golgi protein pbN1_23060 PF00501 AMP-binding enzyme pbN1_23070 PF12399 Branched-chain amino acid ATP-binding cassette transporter pbN1_23070 PF00005 ABC transporter pbN1_23080 PF02653 Branched-chain amino acid transport system / permease component pbN1_23110 PF00005 ABC transporter pbN1_23130 PF02515 CoA-transferase family III pbN1_23160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_23160 PF00072 Response regulator receiver domain pbN1_23160 PF01627 Hpt domain pbN1_23160 PF00512 His Kinase A (phospho-acceptor) domain pbN1_23160 PF00672 HAMP domain pbN1_23180 PF00072 Response regulator receiver domain pbN1_23180 PF00196 Bacterial regulatory proteins, luxR family pbN1_23210 PF01565 FAD binding domain pbN1_23210 PF02913 FAD linked oxidases, C-terminal domain pbN1_23220 PF01037 Lrp/AsnC ligand binding domain pbN1_23230 PF03144 Elongation factor Tu domain 2 pbN1_23230 PF00009 Elongation factor Tu GTP binding domain pbN1_23230 PF03143 Elongation factor Tu C-terminal domain pbN1_23240 PF00584 SecE/Sec61-gamma subunits of protein translocation complex pbN1_23250 PF02357 Transcription termination factor nusG pbN1_23250 PF00467 KOW motif pbN1_23260 PF00298 Ribosomal protein L11, RNA binding domain pbN1_23260 PF03946 Ribosomal protein L11, N-terminal domain pbN1_23270 PF00687 Ribosomal protein L1p/L10e family pbN1_23280 PF00466 Ribosomal protein L10 pbN1_23290 PF16320 Ribosomal protein L7/L12 dimerisation domain pbN1_23290 PF00542 Ribosomal protein L7/L12 C-terminal domain pbN1_23300 PF04565 RNA polymerase Rpb2, domain 3 pbN1_23300 PF00562 RNA polymerase Rpb2, domain 6 pbN1_23300 PF04560 RNA polymerase Rpb2, domain 7 pbN1_23300 PF04561 RNA polymerase Rpb2, domain 2 pbN1_23300 PF10385 RNA polymerase beta subunit external 1 domain pbN1_23300 PF04563 RNA polymerase beta subunit pbN1_23310 PF04998 RNA polymerase Rpb1, domain 5 pbN1_23310 PF00623 RNA polymerase Rpb1, domain 2 pbN1_23310 PF04997 RNA polymerase Rpb1, domain 1 pbN1_23310 PF04983 RNA polymerase Rpb1, domain 3 pbN1_23310 PF05000 RNA polymerase Rpb1, domain 4 pbN1_23320 PF00164 Ribosomal protein S12/S23 pbN1_23330 PF00177 Ribosomal protein S7p/S5e pbN1_23340 PF03144 Elongation factor Tu domain 2 pbN1_23340 PF00679 Elongation factor G C-terminus pbN1_23340 PF14492 Elongation Factor G, domain II pbN1_23340 PF03764 Elongation factor G, domain IV pbN1_23340 PF00009 Elongation factor Tu GTP binding domain pbN1_23350 PF03144 Elongation factor Tu domain 2 pbN1_23350 PF03143 Elongation factor Tu C-terminal domain pbN1_23350 PF00009 Elongation factor Tu GTP binding domain pbN1_23360 PF00338 Ribosomal protein S10p/S20e pbN1_23370 PF00297 Ribosomal protein L3 pbN1_23380 PF00573 Ribosomal protein L4/L1 family pbN1_23390 PF00276 Ribosomal protein L23 pbN1_23400 PF03947 Ribosomal Proteins L2, C-terminal domain pbN1_23400 PF00181 Ribosomal Proteins L2, RNA binding domain pbN1_23410 PF00203 Ribosomal protein S19 pbN1_23420 PF00237 Ribosomal protein L22p/L17e pbN1_23430 PF00189 Ribosomal protein S3, C-terminal domain pbN1_23430 PF07650 KH domain pbN1_23440 PF00252 Ribosomal protein L16p/L10e pbN1_23450 PF00831 Ribosomal L29 protein pbN1_23460 PF00366 Ribosomal protein S17 pbN1_23470 PF00238 Ribosomal protein L14p/L23e pbN1_23480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 pbN1_23490 PF00673 ribosomal L5P family C-terminus pbN1_23490 PF00281 Ribosomal protein L5 pbN1_23500 PF00253 Ribosomal protein S14p/S29e pbN1_23510 PF00410 Ribosomal protein S8 pbN1_23520 PF00347 Ribosomal protein L6 pbN1_23530 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast pbN1_23540 PF00333 Ribosomal protein S5, N-terminal domain pbN1_23540 PF03719 Ribosomal protein S5, C-terminal domain pbN1_23550 PF00327 Ribosomal protein L30p/L7e pbN1_23560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A pbN1_23570 PF00344 SecY translocase pbN1_23580 PF01176 Translation initiation factor 1A / IF-1 pbN1_23590 PF00416 Ribosomal protein S13/S18 pbN1_23600 PF00411 Ribosomal protein S11 pbN1_23610 PF00163 Ribosomal protein S4/S9 N-terminal domain pbN1_23610 PF01479 S4 domain pbN1_23620 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain pbN1_23620 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain pbN1_23620 PF01000 RNA polymerase Rpb3/RpoA insert domain pbN1_23630 PF01196 Ribosomal protein L17 pbN1_23640 PF16363 GDP-mannose 4,6 dehydratase pbN1_23650 PF17755 UvrA DNA-binding domain pbN1_23650 PF17760 UvrA interaction domain pbN1_23660 PF07690 Major Facilitator Superfamily pbN1_23670 PF00436 Single-strand binding protein family pbN1_23680 PF00155 Aminotransferase class I and II pbN1_23710 PF00899 ThiF family pbN1_23740 PF00873 AcrB/AcrD/AcrF family pbN1_23760 PF02600 Disulfide bond formation protein DsbB pbN1_23770 PF00672 HAMP domain pbN1_23770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_23790 PF02525 Flavodoxin-like fold pbN1_23800 PF01548 Transposase pbN1_23800 PF02371 Transposase IS116/IS110/IS902 family pbN1_23810 PF02678 Pirin pbN1_23810 PF05726 Pirin C-terminal cupin domain pbN1_23820 PF02885 Glycosyl transferase family, helical bundle domain pbN1_23830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase pbN1_23830 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase pbN1_23840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase pbN1_23840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase pbN1_23860 PF01008 Initiation factor 2 subunit family pbN1_23870 PF00155 Aminotransferase class I and II pbN1_23890 PF00512 His Kinase A (phospho-acceptor) domain pbN1_23890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_23900 PF00158 Sigma-54 interaction domain pbN1_23900 PF00072 Response regulator receiver domain pbN1_23900 PF02954 Bacterial regulatory protein, Fis family pbN1_23970 PF08241 Methyltransferase domain pbN1_24000 PF00114 Pilin (bacterial filament) pbN1_24000 PF07963 Prokaryotic N-terminal methylation motif pbN1_24030 PF01510 N-acetylmuramoyl-L-alanine amidase pbN1_24050 PF02589 LUD domain pbN1_24060 PF02589 LUD domain pbN1_24060 PF11870 Domain of unknown function (DUF3390) pbN1_24060 PF13183 4Fe-4S dicluster domain pbN1_24070 PF02754 Cysteine-rich domain pbN1_24090 PF00873 AcrB/AcrD/AcrF family pbN1_24110 PF04055 Radical SAM superfamily pbN1_24110 PF08497 Radical SAM N-terminal pbN1_24110 PF11842 Domain of unknown function (DUF3362) pbN1_24150 PF01062 Bestrophin, RFP-TM, chloride channel pbN1_24160 PF02773 S-adenosylmethionine synthetase, C-terminal domain pbN1_24160 PF02772 S-adenosylmethionine synthetase, central domain pbN1_24160 PF00438 S-adenosylmethionine synthetase, N-terminal domain pbN1_24180 PF03279 Bacterial lipid A biosynthesis acyltransferase pbN1_24190 PF01678 Diaminopimelate epimerase pbN1_24220 PF10672 S-adenosylmethionine-dependent methyltransferase pbN1_24220 PF17785 PUA-like domain pbN1_24240 PF05496 Holliday junction DNA helicase RuvB P-loop domain pbN1_24240 PF05491 RuvB C-terminal winged helix domain pbN1_24240 PF17864 RuvB AAA lid domain pbN1_24250 PF07499 RuvA, C-terminal domain pbN1_24250 PF01330 RuvA N terminal domain pbN1_24280 PF10150 Ribonuclease E/G family pbN1_24280 PF00575 S1 RNA binding domain pbN1_24290 PF02545 Maf-like protein pbN1_24300 PF02590 Predicted SPOUT methyltransferase pbN1_24320 PF01467 Cytidylyltransferase-like pbN1_24350 PF01636 Phosphotransferase enzyme family pbN1_24370 PF03641 Possible lysine decarboxylase pbN1_24380 PF01612 3'-5' exonuclease pbN1_24380 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain pbN1_24380 PF01367 5'-3' exonuclease, C-terminal SAM fold pbN1_24380 PF00476 DNA polymerase family A pbN1_24390 PF16861 Carbamoyltransferase C-terminus pbN1_24390 PF02543 Carbamoyltransferase N-terminus pbN1_24400 PF13439 Glycosyltransferase Family 4 pbN1_24400 PF00534 Glycosyl transferases group 1 pbN1_24460 PF00664 ABC transporter transmembrane region pbN1_24460 PF00005 ABC transporter pbN1_24490 PF00534 Glycosyl transferases group 1 pbN1_24490 PF13439 Glycosyltransferase Family 4 pbN1_24500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) pbN1_24510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) pbN1_24520 PF01370 NAD dependent epimerase/dehydratase family pbN1_24530 PF01467 Cytidylyltransferase-like pbN1_24530 PF00294 pfkB family carbohydrate kinase pbN1_24560 PF02654 Cobalamin-5-phosphate synthase pbN1_24590 PF02277 Phosphoribosyltransferase pbN1_24600 PF00563 EAL domain pbN1_24600 PF00990 Diguanylate cyclase, GGDEF domain pbN1_24600 PF03707 Bacterial signalling protein N terminal repeat pbN1_24610 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase pbN1_24650 PF01032 FecCD transport family pbN1_24660 PF00005 ABC transporter pbN1_24680 PF05922 Peptidase inhibitor I9 pbN1_24680 PF00082 Subtilase family pbN1_24680 PF04151 Bacterial pre-peptidase C-terminal domain pbN1_24690 PF07282 Putative transposase DNA-binding domain pbN1_24690 PF01385 Probable transposase pbN1_24690 PF12323 Helix-turn-helix domain pbN1_24700 PF10414 Sirohaem synthase dimerisation region pbN1_24700 PF14824 Sirohaem biosynthesis protein central pbN1_24700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_24710 PF00881 Nitroreductase family pbN1_24730 PF00990 Diguanylate cyclase, GGDEF domain pbN1_24740 PF03861 ANTAR domain pbN1_24740 PF00072 Response regulator receiver domain pbN1_24750 PF07568 Histidine kinase pbN1_24750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_24750 PF12282 Signal transduction histidine kinase pbN1_24760 PF00563 EAL domain pbN1_24760 PF00990 Diguanylate cyclase, GGDEF domain pbN1_24760 PF03707 Bacterial signalling protein N terminal repeat pbN1_24770 PF03466 LysR substrate binding domain pbN1_24770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_24790 PF00924 Mechanosensitive ion channel pbN1_24810 PF01464 Transglycosylase SLT domain pbN1_24810 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain pbN1_24850 PF00378 Enoyl-CoA hydratase/isomerase pbN1_24860 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_24860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_24860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_24890 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_24910 PF09339 IclR helix-turn-helix domain pbN1_24920 PF00378 Enoyl-CoA hydratase/isomerase pbN1_24930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_24930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_24930 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain pbN1_24940 PF00108 Thiolase, N-terminal domain pbN1_24940 PF02803 Thiolase, C-terminal domain pbN1_24950 PF05872 Bacterial protein of unknown function (DUF853) pbN1_24990 PF02219 Methylenetetrahydrofolate reductase pbN1_25000 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain pbN1_25000 PF05221 S-adenosyl-L-homocysteine hydrolase pbN1_25010 PF00313 'Cold-shock' DNA-binding domain pbN1_25020 PF01176 Translation initiation factor 1A / IF-1 pbN1_25040 PF03239 Iron permease FTR1 family pbN1_25070 PF10634 Fe2+ transport protein pbN1_25120 PF00872 Transposase, Mutator family pbN1_25140 PF10544 T5orf172 domain pbN1_25150 PF02321 Outer membrane efflux protein pbN1_25160 PF00005 ABC transporter pbN1_25160 PF02687 FtsX-like permease family pbN1_25160 PF12704 MacB-like periplasmic core domain pbN1_25170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_25180 PF02472 Biopolymer transport protein ExbD/TolR pbN1_25190 PF01618 MotA/TolQ/ExbB proton channel family pbN1_25210 PF00210 Ferritin-like domain pbN1_25220 PF04324 BFD-like [2Fe-2S] binding domain pbN1_25260 PF08448 PAS fold pbN1_25260 PF00563 EAL domain pbN1_25260 PF00990 Diguanylate cyclase, GGDEF domain pbN1_25260 PF08447 PAS fold pbN1_25290 PF01790 Prolipoprotein diacylglyceryl transferase pbN1_25300 PF04337 Protein of unknown function, DUF480 pbN1_25310 PF00920 Dehydratase family pbN1_25320 PF08668 HDOD domain pbN1_25320 PF00563 EAL domain pbN1_25340 PF05164 Cell division protein ZapA pbN1_25350 PF01925 Sulfite exporter TauE/SafE pbN1_25360 PF03781 Sulfatase-modifying factor enzyme 1 pbN1_25360 PF12867 DinB superfamily pbN1_25370 PF01297 Zinc-uptake complex component A periplasmic pbN1_25380 PF00950 ABC 3 transport family pbN1_25390 PF00005 ABC transporter pbN1_25400 PF01475 Ferric uptake regulator family pbN1_25410 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term pbN1_25410 PF14489 QueF-like protein pbN1_25430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III pbN1_25440 PF03707 Bacterial signalling protein N terminal repeat pbN1_25440 PF00563 EAL domain pbN1_25440 PF00990 Diguanylate cyclase, GGDEF domain pbN1_25450 PF00512 His Kinase A (phospho-acceptor) domain pbN1_25450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_25460 PF08668 HDOD domain pbN1_25460 PF00563 EAL domain pbN1_25470 PF00175 Oxidoreductase NAD-binding domain pbN1_25470 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_25470 PF00970 Oxidoreductase FAD-binding domain pbN1_25490 PF03653 Uncharacterised protein family (UPF0093) pbN1_25500 PF01170 Putative RNA methylase family UPF0020 pbN1_25500 PF02926 THUMP domain pbN1_25510 PF00437 Type II/IV secretion system protein pbN1_25520 PF00437 Type II/IV secretion system protein pbN1_25530 PF01168 Alanine racemase, N-terminal domain pbN1_25540 PF14748 Pyrroline-5-carboxylate reductase dimerisation pbN1_25540 PF03807 NADP oxidoreductase coenzyme F420-dependent pbN1_25550 PF02325 YGGT family pbN1_25560 PF02594 Uncharacterised ACR, YggU family COG1872 pbN1_25570 PF01979 Amidohydrolase family pbN1_25580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain pbN1_25580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain pbN1_25590 PF00156 Phosphoribosyl transferase domain pbN1_25600 PF03652 Holliday junction resolvase pbN1_25610 PF02622 Uncharacterized ACR, COG1678 pbN1_25620 PF01627 Hpt domain pbN1_25620 PF01584 CheW-like domain pbN1_25620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_25620 PF07194 P2 response regulator binding domain pbN1_25620 PF02895 Signal transducing histidine kinase, homodimeric domain pbN1_25630 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term pbN1_25630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_25640 PF01584 CheW-like domain pbN1_25650 PF00072 Response regulator receiver domain pbN1_25660 PF00072 Response regulator receiver domain pbN1_25670 PF00301 Rubredoxin pbN1_25680 PF08543 Phosphomethylpyrimidine kinase pbN1_25690 PF02581 Thiamine monophosphate synthase pbN1_25700 PF00202 Aminotransferase class-III pbN1_25710 PF01769 Divalent cation transporter pbN1_25710 PF00571 CBS domain pbN1_25710 PF03448 MgtE intracellular N domain pbN1_25720 PF00912 Transglycosylase pbN1_25730 PF18317 Shikimate 5'-dehydrogenase C-terminal domain pbN1_25730 PF01488 Shikimate / quinate 5-dehydrogenase pbN1_25730 PF08501 Shikimate dehydrogenase substrate binding domain pbN1_25750 PF00773 RNB domain pbN1_25760 PF13847 Methyltransferase domain pbN1_25770 PF05728 Uncharacterised protein family (UPF0227) pbN1_25780 PF02673 Bacitracin resistance protein BacA pbN1_25790 PF03692 Putative zinc- or iron-chelating domain pbN1_25830 PF01964 Radical SAM ThiC family pbN1_25830 PF13667 ThiC-associated domain pbN1_25840 PF08543 Phosphomethylpyrimidine kinase pbN1_25850 PF01169 Uncharacterized protein family UPF0016 pbN1_25860 PF00194 Eukaryotic-type carbonic anhydrase pbN1_25870 PF00374 Nickel-dependent hydrogenase pbN1_25880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III pbN1_25930 PF03781 Sulfatase-modifying factor enzyme 1 pbN1_25930 PF00069 Protein kinase domain pbN1_25940 PF14032 PknH-like extracellular domain pbN1_25940 PF00069 Protein kinase domain pbN1_25960 PF02321 Outer membrane efflux protein pbN1_25970 PF16697 Inner membrane component of T3SS, cytoplasmic domain pbN1_25980 PF13533 Biotin-lipoyl like pbN1_26000 PF00664 ABC transporter transmembrane region pbN1_26000 PF00005 ABC transporter pbN1_26000 PF03412 Peptidase C39 family pbN1_26010 PF00158 Sigma-54 interaction domain pbN1_26010 PF01590 GAF domain pbN1_26130 PF00873 AcrB/AcrD/AcrF family pbN1_26150 PF00581 Rhodanese-like domain pbN1_26160 PF02321 Outer membrane efflux protein pbN1_26170 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) pbN1_26170 PF00534 Glycosyl transferases group 1 pbN1_26180 PF01370 NAD dependent epimerase/dehydratase family pbN1_26190 PF01370 NAD dependent epimerase/dehydratase family pbN1_26200 PF00953 Glycosyl transferase family 4 pbN1_26210 PF02719 Polysaccharide biosynthesis protein pbN1_26220 PF00149 Calcineurin-like phosphoesterase pbN1_26250 PF04989 Cephalosporin hydroxylase pbN1_26260 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain pbN1_26260 PF00437 Type II/IV secretion system protein pbN1_26270 PF00482 Type II secretion system (T2SS), protein F pbN1_26280 PF08334 Type II secretion system (T2SS), protein G pbN1_26280 PF07963 Prokaryotic N-terminal methylation motif pbN1_26300 PF07963 Prokaryotic N-terminal methylation motif pbN1_26360 PF03958 Bacterial type II/III secretion system short domain pbN1_26360 PF00263 Bacterial type II and III secretion system protein pbN1_26410 PF05698 Bacterial trigger factor protein (TF) C-terminus pbN1_26420 PF00005 ABC transporter pbN1_26450 PF00862 Sucrose synthase pbN1_26450 PF00534 Glycosyl transferases group 1 pbN1_26460 PF05045 Rhamnan synthesis protein F pbN1_26460 PF14307 Glycosyltransferase WbsX pbN1_26620 PF00005 ABC transporter pbN1_26620 PF14524 Wzt C-terminal domain pbN1_26640 PF05922 Peptidase inhibitor I9 pbN1_26640 PF00082 Subtilase family pbN1_26650 PF02321 Outer membrane efflux protein pbN1_26660 PF00529 HlyD membrane-fusion protein of T1SS pbN1_26670 PF00664 ABC transporter transmembrane region pbN1_26670 PF00005 ABC transporter pbN1_26680 PF16363 GDP-mannose 4,6 dehydratase pbN1_26690 PF16363 GDP-mannose 4,6 dehydratase pbN1_26710 PF01230 HIT domain pbN1_26720 PF00294 pfkB family carbohydrate kinase pbN1_26750 PF01219 Prokaryotic diacylglycerol kinase pbN1_26780 PF00289 Biotin carboxylase, N-terminal domain pbN1_26780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain pbN1_26780 PF02785 Biotin carboxylase C-terminal domain pbN1_26800 PF00364 Biotin-requiring enzyme pbN1_26810 PF01220 Dehydroquinase class II pbN1_26820 PF08534 Redoxin pbN1_26840 PF02875 Mur ligase family, glutamate ligase domain pbN1_26840 PF08245 Mur ligase middle domain pbN1_26840 PF01225 Mur ligase family, catalytic domain pbN1_26850 PF04972 BON domain pbN1_26860 PF13580 SIS domain pbN1_26880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_26890 PF01979 Amidohydrolase family pbN1_26910 PF02381 MraZ protein, putative antitoxin-like pbN1_26920 PF01795 MraW methylase family pbN1_26940 PF03717 Penicillin-binding Protein dimerisation domain pbN1_26940 PF00905 Penicillin binding protein transpeptidase domain pbN1_26950 PF01225 Mur ligase family, catalytic domain pbN1_26950 PF02875 Mur ligase family, glutamate ligase domain pbN1_26950 PF08245 Mur ligase middle domain pbN1_26960 PF01225 Mur ligase family, catalytic domain pbN1_26960 PF02875 Mur ligase family, glutamate ligase domain pbN1_26960 PF08245 Mur ligase middle domain pbN1_26970 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 pbN1_26970 PF00953 Glycosyl transferase family 4 pbN1_26980 PF08245 Mur ligase middle domain pbN1_26990 PF01098 Cell cycle protein pbN1_27000 PF03033 Glycosyltransferase family 28 N-terminal domain pbN1_27000 PF04101 Glycosyltransferase family 28 C-terminal domain pbN1_27010 PF08245 Mur ligase middle domain pbN1_27010 PF01225 Mur ligase family, catalytic domain pbN1_27010 PF02875 Mur ligase family, glutamate ligase domain pbN1_27020 PF01820 D-ala D-ala ligase N-terminus pbN1_27020 PF07478 D-ala D-ala ligase C-terminus pbN1_27030 PF08478 POTRA domain, FtsQ-type pbN1_27030 PF03799 Cell division protein FtsQ pbN1_27040 PF02491 SHS2 domain inserted in FTSA pbN1_27050 PF00091 Tubulin/FtsZ family, GTPase domain pbN1_27050 PF12327 FtsZ family, C-terminal domain pbN1_27060 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase pbN1_27090 PF07516 SecA Wing and Scaffold domain pbN1_27090 PF02810 SEC-C motif pbN1_27090 PF07517 SecA DEAD-like domain pbN1_27090 PF01043 SecA preprotein cross-linking domain pbN1_27110 PF01960 ArgJ family pbN1_27120 PF00563 EAL domain pbN1_27120 PF00990 Diguanylate cyclase, GGDEF domain pbN1_27120 PF03707 Bacterial signalling protein N terminal repeat pbN1_27130 PF04379 ApaG domain pbN1_27140 PF08328 Adenylosuccinate lyase C-terminal pbN1_27140 PF00206 Lyase pbN1_27160 PF07549 SecD/SecF GG Motif pbN1_27160 PF02355 Protein export membrane protein pbN1_27170 PF02355 Protein export membrane protein pbN1_27170 PF13721 SecD export protein N-terminal TM region pbN1_27170 PF07549 SecD/SecF GG Motif pbN1_27180 PF02699 Preprotein translocase subunit pbN1_27190 PF01702 Queuine tRNA-ribosyltransferase pbN1_27200 PF02547 Queuosine biosynthesis protein pbN1_27210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_27210 PF03466 LysR substrate binding domain pbN1_27230 PF01027 Inhibitor of apoptosis-promoting Bax1 pbN1_27240 PF00690 Cation transporter/ATPase, N-terminus pbN1_27240 PF00689 Cation transporting ATPase, C-terminus pbN1_27250 PF01595 Cyclin M transmembrane N-terminal domain pbN1_27250 PF03471 Transporter associated domain pbN1_27250 PF00571 CBS domain pbN1_27280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit pbN1_27290 PF09179 TilS substrate binding domain pbN1_27290 PF11734 TilS substrate C-terminal domain pbN1_27290 PF01171 PP-loop family pbN1_27300 PF00196 Bacterial regulatory proteins, luxR family pbN1_27300 PF00072 Response regulator receiver domain pbN1_27310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_27310 PF00512 His Kinase A (phospho-acceptor) domain pbN1_27310 PF00989 PAS fold pbN1_27320 PF03480 Bacterial extracellular solute-binding protein, family 7 pbN1_27330 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component pbN1_27340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component pbN1_27350 PF02423 Ornithine cyclodeaminase/mu-crystallin family pbN1_27370 PF02112 cAMP phosphodiesterases class-II pbN1_27380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain pbN1_27380 PF00437 Type II/IV secretion system protein pbN1_27390 PF00834 Ribulose-phosphate 3 epimerase family pbN1_27400 PF13419 Haloacid dehalogenase-like hydrolase pbN1_27410 PF04715 Anthranilate synthase component I, N terminal region pbN1_27410 PF00425 chorismate binding enzyme pbN1_27420 PF00072 Response regulator receiver domain pbN1_27440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) pbN1_27440 PF00072 Response regulator receiver domain pbN1_27440 PF00512 His Kinase A (phospho-acceptor) domain pbN1_27440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_27440 PF00672 HAMP domain pbN1_27440 PF01627 Hpt domain pbN1_27450 PF01053 Cys/Met metabolism PLP-dependent enzyme pbN1_27460 PF00571 CBS domain pbN1_27460 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_27470 PF00085 Thioredoxin pbN1_27480 PF03831 PhnA domain pbN1_27480 PF08274 PhnA Zinc-Ribbon pbN1_27500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit pbN1_27510 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit pbN1_27520 PF00361 Proton-conducting membrane transporter pbN1_27540 PF00146 NADH dehydrogenase pbN1_27550 PF00361 Proton-conducting membrane transporter pbN1_27580 PF00117 Glutamine amidotransferase class-I pbN1_27590 PF02885 Glycosyl transferase family, helical bundle domain pbN1_27590 PF00591 Glycosyl transferase family, a/b domain pbN1_27600 PF00218 Indole-3-glycerol phosphate synthase pbN1_27620 PF01625 Peptide methionine sulfoxide reductase pbN1_27630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase pbN1_27640 PF01545 Cation efflux family pbN1_27640 PF16916 Dimerisation domain of Zinc Transporter pbN1_27680 PF00570 HRDC domain pbN1_27680 PF09382 RQC domain pbN1_27680 PF16124 RecQ zinc-binding pbN1_27680 PF00271 Helicase conserved C-terminal domain pbN1_27680 PF00270 DEAD/DEAH box helicase pbN1_27690 PF01467 Cytidylyltransferase-like pbN1_27710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain pbN1_27710 PF02790 Cytochrome C oxidase subunit II, transmembrane domain pbN1_27720 PF00115 Cytochrome C and Quinol oxidase polypeptide I pbN1_27740 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 pbN1_27760 PF00510 Cytochrome c oxidase subunit III pbN1_27800 PF02628 Cytochrome oxidase assembly protein pbN1_27810 PF01040 UbiA prenyltransferase family pbN1_27820 PF02630 SCO1/SenC pbN1_27830 PF00140 Sigma-70 factor, region 1.2 pbN1_27830 PF04545 Sigma-70, region 4 pbN1_27830 PF04542 Sigma-70 region 2 pbN1_27850 PF13609 Gram-negative porin pbN1_27900 PF13614 AAA domain pbN1_27920 PF13401 AAA domain pbN1_27920 PF01471 Putative peptidoglycan binding domain pbN1_27930 PF02350 UDP-N-acetylglucosamine 2-epimerase pbN1_27960 PF00534 Glycosyl transferases group 1 pbN1_27970 PF00733 Asparagine synthase pbN1_27970 PF13537 Glutamine amidotransferase domain pbN1_27980 PF13579 Glycosyl transferase 4-like domain pbN1_27980 PF00534 Glycosyl transferases group 1 pbN1_28000 PF00534 Glycosyl transferases group 1 pbN1_28000 PF13439 Glycosyltransferase Family 4 pbN1_28060 PF13439 Glycosyltransferase Family 4 pbN1_28060 PF00534 Glycosyl transferases group 1 pbN1_28110 PF00884 Sulfatase pbN1_28120 PF00535 Glycosyl transferase family 2 pbN1_28140 PF13439 Glycosyltransferase Family 4 pbN1_28140 PF00534 Glycosyl transferases group 1 pbN1_28160 PF00535 Glycosyl transferase family 2 pbN1_28200 PF01943 Polysaccharide biosynthesis protein pbN1_28220 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain pbN1_28220 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain pbN1_28230 PF13193 AMP-binding enzyme C-terminal domain pbN1_28230 PF00501 AMP-binding enzyme pbN1_28240 PF00550 Phosphopantetheine attachment site pbN1_28250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_28250 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_28250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_28260 PF13193 AMP-binding enzyme C-terminal domain pbN1_28260 PF00501 AMP-binding enzyme pbN1_28270 PF00550 Phosphopantetheine attachment site pbN1_28290 PF03600 Citrate transporter pbN1_28290 PF02080 TrkA-C domain pbN1_28300 PF00459 Inositol monophosphatase family pbN1_28310 PF01507 Phosphoadenosine phosphosulfate reductase family pbN1_28330 PF00009 Elongation factor Tu GTP binding domain pbN1_28340 PF00696 Amino acid kinase family pbN1_28350 PF00011 Hsp20/alpha crystallin family pbN1_28370 PF00293 NUDIX domain pbN1_28390 PF00545 ribonuclease pbN1_28400 PF02954 Bacterial regulatory protein, Fis family pbN1_28400 PF00072 Response regulator receiver domain pbN1_28400 PF00158 Sigma-54 interaction domain pbN1_28410 PF02938 GAD domain pbN1_28410 PF00152 tRNA synthetases class II (D, K and N) pbN1_28410 PF01336 OB-fold nucleic acid binding domain pbN1_28440 PF06750 Bacterial Peptidase A24 N-terminal domain pbN1_28440 PF01478 Type IV leader peptidase family pbN1_28450 PF00482 Type II secretion system (T2SS), protein F pbN1_28460 PF00437 Type II/IV secretion system protein pbN1_28460 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain pbN1_28470 PF01578 Cytochrome C assembly protein pbN1_28480 PF00448 SRP54-type protein, GTPase domain pbN1_28480 PF02881 SRP54-type protein, helical bundle domain pbN1_28480 PF02978 Signal peptide binding domain pbN1_28520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily pbN1_28540 PF04542 Sigma-70 region 2 pbN1_28540 PF04546 Sigma-70, non-essential region pbN1_28540 PF03979 Sigma-70 factor, region 1.1 pbN1_28540 PF00140 Sigma-70 factor, region 1.2 pbN1_28540 PF04539 Sigma-70 region 3 pbN1_28540 PF04545 Sigma-70, region 4 pbN1_28550 PF01807 CHC2 zinc finger pbN1_28550 PF08278 DNA primase DnaG DnaB-binding pbN1_28550 PF08275 DNA primase catalytic core, N-terminal domain pbN1_28550 PF10410 DnaB-helicase binding domain of primase pbN1_28560 PF09424 Yqey-like protein pbN1_28570 PF01165 Ribosomal protein S21 pbN1_28580 PF01740 STAS domain pbN1_28580 PF00916 Sulfate permease family pbN1_28590 PF07840 FadR C-terminal domain pbN1_28590 PF00392 Bacterial regulatory proteins, gntR family pbN1_28600 PF02913 FAD linked oxidases, C-terminal domain pbN1_28600 PF01565 FAD binding domain pbN1_28620 PF01565 FAD binding domain pbN1_28630 PF02754 Cysteine-rich domain pbN1_28630 PF13183 4Fe-4S dicluster domain pbN1_28660 PF01544 CorA-like Mg2+ transporter protein pbN1_28670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain pbN1_28670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain pbN1_28680 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch pbN1_28690 PF02233 NAD(P) transhydrogenase beta subunit pbN1_28710 PF00270 DEAD/DEAH box helicase pbN1_28710 PF00271 Helicase conserved C-terminal domain pbN1_28720 PF01728 FtsJ-like methyltransferase pbN1_28720 PF18125 RlmM ferredoxin-like domain pbN1_28740 PF13416 Bacterial extracellular solute-binding protein pbN1_28750 PF03009 Glycerophosphoryl diester phosphodiesterase family pbN1_28760 PF00348 Polyprenyl synthetase pbN1_28770 PF01575 MaoC like domain pbN1_28780 PF02649 Type I GTP cyclohydrolase folE2 pbN1_28790 PF02780 Transketolase, C-terminal domain pbN1_28790 PF02779 Transketolase, pyrimidine binding domain pbN1_28790 PF13292 1-deoxy-D-xylulose-5-phosphate synthase pbN1_28800 PF00348 Polyprenyl synthetase pbN1_28810 PF02609 Exonuclease VII small subunit pbN1_28830 PF02401 LytB protein pbN1_28840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase pbN1_28850 PF01252 Signal peptidase (SPase) II pbN1_28860 PF08264 Anticodon-binding domain of tRNA pbN1_28860 PF06827 Zinc finger found in FPG and IleRS pbN1_28860 PF00133 tRNA synthetases class I (I, L, M and V) pbN1_28870 PF06574 FAD synthetase pbN1_28870 PF01687 Riboflavin kinase pbN1_28880 PF01520 N-acetylmuramoyl-L-alanine amidase pbN1_28880 PF11741 AMIN domain pbN1_28900 PF08331 Domain of unknown function (DUF1730) pbN1_28910 PF01177 Asp/Glu/Hydantoin racemase pbN1_28930 PF00581 Rhodanese-like domain pbN1_28950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain pbN1_28950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain pbN1_28960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase pbN1_28960 PF01266 FAD dependent oxidoreductase pbN1_28970 PF00892 EamA-like transporter family pbN1_28980 PF00672 HAMP domain pbN1_28980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_28980 PF00512 His Kinase A (phospho-acceptor) domain pbN1_28990 PF00072 Response regulator receiver domain pbN1_28990 PF00486 Transcriptional regulatory protein, C terminal pbN1_29010 PF00463 Isocitrate lyase family pbN1_29020 PF03737 Aldolase/RraA pbN1_29030 PF10431 C-terminal, D2-small domain, of ClpB protein pbN1_29030 PF02861 Clp amino terminal domain, pathogenicity island component pbN1_29030 PF17871 AAA lid domain pbN1_29030 PF07724 AAA domain (Cdc48 subfamily) pbN1_29030 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_29040 PF02617 ATP-dependent Clp protease adaptor protein ClpS pbN1_29050 PF00313 'Cold-shock' DNA-binding domain pbN1_29060 PF00471 Ribosomal protein L33 pbN1_29070 PF00830 Ribosomal L28 family pbN1_29080 PF00814 Glycoprotease family pbN1_29090 PF02660 Glycerol-3-phosphate acyltransferase pbN1_29120 PF04073 Aminoacyl-tRNA editing domain pbN1_29130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain pbN1_29130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain pbN1_29140 PF00171 Aldehyde dehydrogenase family pbN1_29150 PF14840 Processivity clamp loader gamma complex DNA pol III C-term pbN1_29150 PF06144 DNA polymerase III, delta subunit pbN1_29170 PF00133 tRNA synthetases class I (I, L, M and V) pbN1_29170 PF13603 Leucyl-tRNA synthetase, Domain 2 pbN1_29170 PF09334 tRNA synthetases class I (M) pbN1_29170 PF08264 Anticodon-binding domain of tRNA pbN1_29200 PF00580 UvrD/REP helicase N-terminal domain pbN1_29200 PF13361 UvrD-like helicase C-terminal domain pbN1_29210 PF13614 AAA domain pbN1_29230 PF03949 Malic enzyme, NAD binding domain pbN1_29230 PF00390 Malic enzyme, N-terminal domain pbN1_29230 PF01515 Phosphate acetyl/butaryl transferase pbN1_29250 PF08240 Alcohol dehydrogenase GroES-like domain pbN1_29250 PF00107 Zinc-binding dehydrogenase pbN1_29270 PF07733 Bacterial DNA polymerase III alpha NTPase domain pbN1_29270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain pbN1_29270 PF14579 Helix-hairpin-helix motif pbN1_29270 PF02811 PHP domain pbN1_29270 PF01336 OB-fold nucleic acid binding domain pbN1_29280 PF10417 C-terminal domain of 1-Cys peroxiredoxin pbN1_29280 PF00578 AhpC/TSA family pbN1_29290 PF00708 Acylphosphatase pbN1_29300 PF01740 STAS domain pbN1_29300 PF00916 Sulfate permease family pbN1_29310 PF09334 tRNA synthetases class I (M) pbN1_29310 PF01588 Putative tRNA binding domain pbN1_29320 PF00691 OmpA family pbN1_29320 PF04972 BON domain pbN1_29330 PF10609 NUBPL iron-transfer P-loop NTPase pbN1_29340 PF00692 dUTPase pbN1_29350 PF01276 Orn/Lys/Arg decarboxylase, major domain pbN1_29350 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain pbN1_29350 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain pbN1_29360 PF00186 Dihydrofolate reductase pbN1_29370 PF00303 Thymidylate synthase pbN1_29400 PF01609 Transposase DDE domain pbN1_29400 PF13808 DDE_Tnp_1-associated pbN1_29420 PF00691 OmpA family pbN1_29430 PF01979 Amidohydrolase family pbN1_29440 PF03989 DNA gyrase C-terminal domain, beta-propeller pbN1_29440 PF00521 DNA gyrase/topoisomerase IV, subunit A pbN1_29450 PF00266 Aminotransferase class-V pbN1_29460 PF01842 ACT domain pbN1_29460 PF00800 Prephenate dehydratase pbN1_29460 PF01817 Chorismate mutase type II pbN1_29470 PF00155 Aminotransferase class I and II pbN1_29480 PF01842 ACT domain pbN1_29480 PF02153 Prephenate dehydrogenase pbN1_29490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) pbN1_29500 PF00575 S1 RNA binding domain pbN1_29510 PF00216 Bacterial DNA-binding protein pbN1_29530 PF18073 Rubredoxin metal binding domain pbN1_29540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain pbN1_29540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain pbN1_29540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain pbN1_29550 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_29600 PF04226 Transglycosylase associated protein pbN1_29610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III pbN1_29620 PF10414 Sirohaem synthase dimerisation region pbN1_29620 PF14824 Sirohaem biosynthesis protein central pbN1_29620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases pbN1_29630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III pbN1_29650 PF17805 AsnC-like ligand binding domain pbN1_29660 PF17805 AsnC-like ligand binding domain pbN1_29660 PF13404 AsnC-type helix-turn-helix domain pbN1_29670 PF17805 AsnC-like ligand binding domain pbN1_29680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III pbN1_29690 PF03264 NapC/NirT cytochrome c family, N-terminal region pbN1_29700 PF09459 Ethylbenzene dehydrogenase pbN1_29720 PF04055 Radical SAM superfamily pbN1_29720 PF13186 Iron-sulfur cluster-binding domain pbN1_29740 PF01641 SelR domain pbN1_29750 PF01625 Peptide methionine sulfoxide reductase pbN1_29760 PF02824 TGS domain pbN1_29760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) pbN1_29760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain pbN1_29760 PF03129 Anticodon binding domain pbN1_29770 PF00707 Translation initiation factor IF-3, C-terminal domain pbN1_29770 PF05198 Translation initiation factor IF-3, N-terminal domain pbN1_29780 PF01632 Ribosomal protein L35 pbN1_29790 PF00453 Ribosomal protein L20 pbN1_29800 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain pbN1_29800 PF01409 tRNA synthetases class II core domain (F) pbN1_29810 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain pbN1_29810 PF03147 Ferredoxin-fold anticodon binding domain pbN1_29810 PF03484 tRNA synthetase B5 domain pbN1_29810 PF01588 Putative tRNA binding domain pbN1_29810 PF03483 B3/4 domain pbN1_29820 PF00216 Bacterial DNA-binding protein pbN1_29840 PF00501 AMP-binding enzyme pbN1_29840 PF14535 AMP-binding enzyme C-terminal domain pbN1_29880 PF00696 Amino acid kinase family pbN1_29880 PF01472 PUA domain pbN1_29890 PF01018 GTP1/OBG pbN1_29890 PF01926 50S ribosome-binding GTPase pbN1_29900 PF01016 Ribosomal L27 protein pbN1_29910 PF00829 Ribosomal prokaryotic L21 protein pbN1_29930 PF00589 Phage integrase family pbN1_29940 PF00589 Phage integrase family pbN1_29940 PF02899 Phage integrase, N-terminal SAM-like domain pbN1_29950 PF04002 RadC-like JAB domain pbN1_29960 PF02441 Flavoprotein pbN1_29960 PF04127 DNA / pantothenate metabolism flavoprotein pbN1_29970 PF00692 dUTPase pbN1_29980 PF13344 Haloacid dehalogenase-like hydrolase pbN1_29980 PF00293 NUDIX domain pbN1_29990 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) pbN1_30000 PF05116 Sucrose-6F-phosphate phosphohydrolase pbN1_30000 PF00982 Glycosyltransferase family 20 pbN1_30010 PF03971 Monomeric isocitrate dehydrogenase pbN1_30030 PF00180 Isocitrate/isopropylmalate dehydrogenase pbN1_30050 PF00474 Sodium:solute symporter family pbN1_30080 PF00679 Elongation factor G C-terminus pbN1_30080 PF14492 Elongation Factor G, domain II pbN1_30080 PF03764 Elongation factor G, domain IV pbN1_30080 PF00009 Elongation factor Tu GTP binding domain pbN1_30080 PF03144 Elongation factor Tu domain 2 pbN1_30100 PF04172 LrgB-like family pbN1_30110 PF03788 LrgA family pbN1_30150 PF01274 Malate synthase pbN1_30180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_30180 PF03466 LysR substrate binding domain pbN1_30270 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB pbN1_30280 PF13356 Arm DNA-binding domain pbN1_30280 PF00589 Phage integrase family pbN1_30400 PF01381 Helix-turn-helix pbN1_30410 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB pbN1_30440 PF03707 Bacterial signalling protein N terminal repeat pbN1_30440 PF00990 Diguanylate cyclase, GGDEF domain pbN1_30440 PF00563 EAL domain pbN1_30450 PF00072 Response regulator receiver domain pbN1_30450 PF00512 His Kinase A (phospho-acceptor) domain pbN1_30450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_30450 PF01627 Hpt domain pbN1_30460 PF01739 CheR methyltransferase, SAM binding domain pbN1_30460 PF03705 CheR methyltransferase, all-alpha domain pbN1_30470 PF00990 Diguanylate cyclase, GGDEF domain pbN1_30480 PF01975 Survival protein SurE pbN1_30500 PF01476 LysM domain pbN1_30500 PF01551 Peptidase family M23 pbN1_30510 PF00140 Sigma-70 factor, region 1.2 pbN1_30510 PF04542 Sigma-70 region 2 pbN1_30510 PF04545 Sigma-70, region 4 pbN1_30510 PF04539 Sigma-70 region 3 pbN1_30520 PF13406 Transglycosylase SLT domain pbN1_30530 PF00850 Histone deacetylase domain pbN1_30540 PF00701 Dihydrodipicolinate synthetase family pbN1_30550 PF06804 NlpB/DapX lipoprotein pbN1_30570 PF05958 tRNA (Uracil-5-)-methyltransferase pbN1_30580 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component pbN1_30590 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component pbN1_30600 PF01869 BadF/BadG/BcrA/BcrD ATPase family pbN1_30610 PF01869 BadF/BadG/BcrA/BcrD ATPase family pbN1_30630 PF00106 short chain dehydrogenase pbN1_30640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_30640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_30640 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_30650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component pbN1_30660 PF03480 Bacterial extracellular solute-binding protein, family 7 pbN1_30670 PF00501 AMP-binding enzyme pbN1_30670 PF13193 AMP-binding enzyme C-terminal domain pbN1_30700 PF00378 Enoyl-CoA hydratase/isomerase pbN1_30710 PF00378 Enoyl-CoA hydratase/isomerase pbN1_30730 PF13977 BetI-type transcriptional repressor, C-terminal pbN1_30730 PF00440 Bacterial regulatory proteins, tetR family pbN1_30740 PF00849 RNA pseudouridylate synthase pbN1_30760 PF01312 FlhB HrpN YscU SpaS Family pbN1_30770 PF00771 FHIPEP family pbN1_30780 PF00448 SRP54-type protein, GTPase domain pbN1_30800 PF04542 Sigma-70 region 2 pbN1_30800 PF04539 Sigma-70 region 3 pbN1_30800 PF04545 Sigma-70, region 4 pbN1_30810 PF01618 MotA/TolQ/ExbB proton channel family pbN1_30820 PF13677 Membrane MotB of proton-channel complex MotA/MotB pbN1_30820 PF00691 OmpA family pbN1_30830 PF00521 DNA gyrase/topoisomerase IV, subunit A pbN1_30840 PF01850 PIN domain pbN1_30850 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin pbN1_30870 PF00204 DNA gyrase B pbN1_30870 PF00986 DNA gyrase B subunit, carboxyl terminus pbN1_30870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_30870 PF01751 Toprim domain pbN1_30880 PF01119 DNA mismatch repair protein, C-terminal domain pbN1_30880 PF08676 MutL C terminal dimerisation domain pbN1_30890 PF00551 Formyl transferase pbN1_30910 PF01029 NusB family pbN1_30910 PF01189 16S rRNA methyltransferase RsmB/F pbN1_30920 PF13091 PLD-like domain pbN1_30930 PF00924 Mechanosensitive ion channel pbN1_30930 PF12795 Mechanosensitive ion channel porin domain pbN1_30930 PF12794 Mechanosensitive ion channel inner membrane domain 1 pbN1_30950 PF01242 6-pyruvoyl tetrahydropterin synthase pbN1_30990 PF00696 Amino acid kinase family pbN1_30990 PF01842 ACT domain pbN1_30990 PF13840 ACT domain pbN1_31070 PF01569 PAP2 superfamily pbN1_31120 PF00535 Glycosyl transferase family 2 pbN1_31130 PF00884 Sulfatase pbN1_31170 PF08240 Alcohol dehydrogenase GroES-like domain pbN1_31180 PF00155 Aminotransferase class I and II pbN1_31200 PF05958 tRNA (Uracil-5-)-methyltransferase pbN1_31220 PF00781 Diacylglycerol kinase catalytic domain pbN1_31230 PF00149 Calcineurin-like phosphoesterase pbN1_31240 PF02685 Glucokinase pbN1_31250 PF16657 Maltogenic Amylase, C-terminal domain pbN1_31250 PF00128 Alpha amylase, catalytic domain pbN1_31270 PF00361 Proton-conducting membrane transporter pbN1_31270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus pbN1_31270 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter pbN1_31270 PF13244 Domain of unknown function (DUF4040) pbN1_31280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L pbN1_31290 PF00361 Proton-conducting membrane transporter pbN1_31300 PF01899 Na+/H+ ion antiporter subunit pbN1_31310 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) pbN1_31320 PF03334 Na+/H+ antiporter subunit pbN1_31340 PF18327 Proline utilization A proline dehydrogenase N-terminal domain pbN1_31340 PF01619 Proline dehydrogenase pbN1_31340 PF00171 Aldehyde dehydrogenase family pbN1_31340 PF14850 DNA-binding domain of Proline dehydrogenase pbN1_31350 PF13091 PLD-like domain pbN1_31350 PF13396 Phospholipase_D-nuclease N-terminal pbN1_31360 PF12697 Alpha/beta hydrolase family pbN1_31390 PF00753 Metallo-beta-lactamase superfamily pbN1_31390 PF00301 Rubredoxin pbN1_31390 PF00258 Flavodoxin pbN1_31400 PF02082 Transcriptional regulator pbN1_31410 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase pbN1_31420 PF01487 Type I 3-dehydroquinase pbN1_31430 PF08546 Ketopantoate reductase PanE/ApbA C terminal pbN1_31430 PF02558 Ketopantoate reductase PanE/ApbA pbN1_31440 PF01844 HNH endonuclease pbN1_31470 PF00582 Universal stress protein family pbN1_31480 PF00072 Response regulator receiver domain pbN1_31490 PF13545 Crp-like helix-turn-helix domain pbN1_31490 PF00027 Cyclic nucleotide-binding domain pbN1_31530 PF08406 CbbQ/NirQ/NorQ C-terminal pbN1_31530 PF07728 AAA domain (dynein-related subfamily) pbN1_31550 PF00510 Cytochrome c oxidase subunit III pbN1_31560 PF00115 Cytochrome C and Quinol oxidase polypeptide I pbN1_31570 PF00034 Cytochrome c pbN1_31590 PF13193 AMP-binding enzyme C-terminal domain pbN1_31590 PF00501 AMP-binding enzyme pbN1_31590 PF16177 Acetyl-coenzyme A synthetase N-terminus pbN1_31620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_31620 PF00989 PAS fold pbN1_31620 PF00672 HAMP domain pbN1_31620 PF18698 Histidine kinase sensor domain pbN1_31620 PF00512 His Kinase A (phospho-acceptor) domain pbN1_31630 PF00072 Response regulator receiver domain pbN1_31630 PF00486 Transcriptional regulatory protein, C terminal pbN1_31640 PF00929 Exonuclease pbN1_31650 PF00474 Sodium:solute symporter family pbN1_31660 PF03707 Bacterial signalling protein N terminal repeat pbN1_31660 PF00990 Diguanylate cyclase, GGDEF domain pbN1_31660 PF00563 EAL domain pbN1_31690 PF00116 Cytochrome C oxidase subunit II, periplasmic domain pbN1_31690 PF02790 Cytochrome C oxidase subunit II, transmembrane domain pbN1_31690 PF00034 Cytochrome c pbN1_31700 PF00115 Cytochrome C and Quinol oxidase polypeptide I pbN1_31730 PF01370 NAD dependent epimerase/dehydratase family pbN1_31740 PF01329 Pterin 4 alpha carbinolamine dehydratase pbN1_31780 PF02586 SOS response associated peptidase (SRAP) pbN1_31800 PF10995 Cellulose biosynthesis GIL pbN1_31820 PF11658 Cellulose biosynthesis protein BcsG pbN1_31830 PF06564 Cellulose biosynthesis protein BcsQ pbN1_31840 PF00535 Glycosyl transferase family 2 pbN1_31840 PF07238 PilZ domain pbN1_31850 PF03170 Bacterial cellulose synthase subunit pbN1_31860 PF01270 Glycosyl hydrolases family 8 pbN1_31870 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) pbN1_31880 PF00990 Diguanylate cyclase, GGDEF domain pbN1_31880 PF00072 Response regulator receiver domain pbN1_31900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal pbN1_31900 PF01926 50S ribosome-binding GTPase pbN1_31920 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_31920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain pbN1_31930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) pbN1_31930 PF00364 Biotin-requiring enzyme pbN1_31930 PF02817 e3 binding domain pbN1_31940 PF17831 Pyruvate dehydrogenase E1 component middle domain pbN1_31940 PF00456 Transketolase, thiamine diphosphate binding domain pbN1_31960 PF00989 PAS fold pbN1_31960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_31960 PF00512 His Kinase A (phospho-acceptor) domain pbN1_31970 PF00196 Bacterial regulatory proteins, luxR family pbN1_31970 PF00072 Response regulator receiver domain pbN1_31980 PF17200 Single Cache domain 2 pbN1_31980 PF00672 HAMP domain pbN1_31980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_32010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain pbN1_32010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain pbN1_32020 PF00731 AIR carboxylase pbN1_32030 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain pbN1_32030 PF02222 ATP-grasp domain pbN1_32040 PF01300 Telomere recombination pbN1_32040 PF03481 Putative GTP-binding controlling metal-binding pbN1_32060 PF02796 Helix-turn-helix domain of resolvase pbN1_32060 PF00239 Resolvase, N terminal domain pbN1_32110 PF13005 zinc-finger binding domain of transposase IS66 pbN1_32110 PF13007 Transposase C of IS166 homeodomain pbN1_32110 PF13817 IS66 C-terminal element pbN1_32110 PF03050 Transposase IS66 family pbN1_32140 PF01695 IstB-like ATP binding protein pbN1_32150 PF00665 Integrase core domain pbN1_32300 PF13808 DDE_Tnp_1-associated pbN1_32300 PF01609 Transposase DDE domain pbN1_32330 PF00436 Single-strand binding protein family pbN1_32420 PF00239 Resolvase, N terminal domain pbN1_32420 PF02796 Helix-turn-helix domain of resolvase pbN1_32530 PF02384 N-6 DNA Methylase pbN1_32540 PF12161 HsdM N-terminal domain pbN1_32540 PF02384 N-6 DNA Methylase pbN1_32560 PF18766 SWI2/SNF2 ATPase pbN1_32560 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) pbN1_32560 PF11867 Domain of unknown function (DUF3387) pbN1_32590 PF02580 D-Tyr-tRNA(Tyr) deacylase pbN1_32600 PF01327 Polypeptide deformylase pbN1_32610 PF00472 RF-1 domain pbN1_32630 PF13378 Enolase C-terminal domain-like pbN1_32640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_32640 PF03466 LysR substrate binding domain pbN1_32670 PF00665 Integrase core domain pbN1_32680 PF01695 IstB-like ATP binding protein pbN1_32690 PF02694 Uncharacterised BCR, YnfA/UPF0060 family pbN1_32710 PF02661 Fic/DOC family pbN1_32710 PF13784 Fic/DOC family N-terminal pbN1_32720 PF02661 Fic/DOC family pbN1_32740 PF01451 Low molecular weight phosphotyrosine protein phosphatase pbN1_32750 PF06953 Arsenical resistance operon trans-acting repressor ArsD pbN1_32760 PF02374 Anion-transporting ATPase pbN1_32770 PF01758 Sodium Bile acid symporter family pbN1_32780 PF04542 Sigma-70 region 2 pbN1_32780 PF04545 Sigma-70, region 4 pbN1_32790 PF00108 Thiolase, N-terminal domain pbN1_32790 PF02803 Thiolase, C-terminal domain pbN1_32810 PF00970 Oxidoreductase FAD-binding domain pbN1_32810 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_32860 PF00672 HAMP domain pbN1_32860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_32860 PF00512 His Kinase A (phospho-acceptor) domain pbN1_32870 PF00486 Transcriptional regulatory protein, C terminal pbN1_32870 PF00072 Response regulator receiver domain pbN1_32920 PF00005 ABC transporter pbN1_32930 PF12704 MacB-like periplasmic core domain pbN1_32930 PF00005 ABC transporter pbN1_32930 PF02687 FtsX-like permease family pbN1_32980 PF13230 Glutamine amidotransferases class-II pbN1_33060 PF11339 Protein of unknown function (DUF3141) pbN1_33090 PF07859 alpha/beta hydrolase fold pbN1_33100 PF02397 Bacterial sugar transferase pbN1_33110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_33110 PF00512 His Kinase A (phospho-acceptor) domain pbN1_33110 PF00989 PAS fold pbN1_33120 PF02954 Bacterial regulatory protein, Fis family pbN1_33120 PF00072 Response regulator receiver domain pbN1_33120 PF00158 Sigma-54 interaction domain pbN1_33140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain pbN1_33140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain pbN1_33140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain pbN1_33150 PF00497 Bacterial extracellular solute-binding proteins, family 3 pbN1_33150 PF01464 Transglycosylase SLT domain pbN1_33180 PF16326 ABC transporter C-terminal domain pbN1_33180 PF00005 ABC transporter pbN1_33180 PF12848 ABC transporter pbN1_33200 PF08240 Alcohol dehydrogenase GroES-like domain pbN1_33200 PF00107 Zinc-binding dehydrogenase pbN1_33210 PF00486 Transcriptional regulatory protein, C terminal pbN1_33210 PF00072 Response regulator receiver domain pbN1_33220 PF16177 Acetyl-coenzyme A synthetase N-terminus pbN1_33220 PF00501 AMP-binding enzyme pbN1_33220 PF13193 AMP-binding enzyme C-terminal domain pbN1_33290 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_33290 PF12804 MobA-like NTP transferase domain pbN1_33300 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase pbN1_33320 PF02805 Metal binding domain of Ada pbN1_33320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain pbN1_33320 PF12833 Helix-turn-helix domain pbN1_33320 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain pbN1_33330 PF00730 HhH-GPD superfamily base excision DNA repair protein pbN1_33330 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain pbN1_33340 PF01967 MoaC family pbN1_33350 PF01435 Peptidase family M48 pbN1_33360 PF01206 Sulfurtransferase TusA pbN1_33370 PF08264 Anticodon-binding domain of tRNA pbN1_33370 PF00133 tRNA synthetases class I (I, L, M and V) pbN1_33370 PF10458 Valyl tRNA synthetase tRNA binding arm pbN1_33400 PF02789 Cytosol aminopeptidase family, N-terminal domain pbN1_33400 PF00883 Cytosol aminopeptidase family, catalytic domain pbN1_33410 PF03739 Lipopolysaccharide export system permease LptF/LptG pbN1_33430 PF01245 Ribosomal protein L19 pbN1_33440 PF01746 tRNA (Guanine-1)-methyltransferase pbN1_33450 PF01782 RimM N-terminal domain pbN1_33450 PF05239 PRC-barrel domain pbN1_33460 PF00886 Ribosomal protein S16 pbN1_33480 PF03631 Virulence factor BrkB pbN1_33490 PF03358 NADPH-dependent FMN reductase pbN1_33510 PF00682 HMGL-like pbN1_33510 PF08502 LeuA allosteric (dimerisation) domain pbN1_33520 PF00175 Oxidoreductase NAD-binding domain pbN1_33520 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_33520 PF00970 Oxidoreductase FAD-binding domain pbN1_33550 PF09086 Domain of unknown function (DUF1924) pbN1_33570 PF00072 Response regulator receiver domain pbN1_33570 PF00486 Transcriptional regulatory protein, C terminal pbN1_33580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_33600 PF01066 CDP-alcohol phosphatidyltransferase pbN1_33610 PF02666 Phosphatidylserine decarboxylase pbN1_33620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain pbN1_33620 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain pbN1_33630 PF10369 Small subunit of acetolactate synthase pbN1_33640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_33640 PF00205 Thiamine pyrophosphate enzyme, central domain pbN1_33640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain pbN1_33690 PF01433 Peptidase family M1 domain pbN1_33690 PF17432 Domain of unknown function (DUF3458_C) ARM repeats pbN1_33690 PF11940 Domain of unknown function (DUF3458) Ig-like fold pbN1_33700 PF00478 IMP dehydrogenase / GMP reductase domain pbN1_33700 PF00571 CBS domain pbN1_33710 PF02569 Pantoate-beta-alanine ligase pbN1_33720 PF02548 Ketopantoate hydroxymethyltransferase pbN1_33730 PF01712 Deoxynucleoside kinase pbN1_33750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) pbN1_33760 PF12626 Polymerase A arginine-rich C-terminus pbN1_33760 PF12627 Probable RNA and SrmB- binding site of polymerase A pbN1_33760 PF01743 Poly A polymerase head domain pbN1_33780 PF08299 Bacterial dnaA protein helix-turn-helix pbN1_33780 PF00308 Bacterial dnaA protein pbN1_33790 PF01594 AI-2E family transporter pbN1_33800 PF00586 AIR synthase related protein, N-terminal domain pbN1_33800 PF02769 AIR synthase related protein, C-terminal domain pbN1_33810 PF00529 HlyD membrane-fusion protein of T1SS pbN1_33810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_33820 PF00873 AcrB/AcrD/AcrF family pbN1_33920 PF00109 Beta-ketoacyl synthase, N-terminal domain pbN1_33920 PF02801 Beta-ketoacyl synthase, C-terminal domain pbN1_33930 PF05175 Methyltransferase small domain pbN1_33930 PF08468 Methyltransferase small domain N-terminal pbN1_33940 PF01522 Polysaccharide deacetylase pbN1_33980 PF07977 FabA-like domain pbN1_34030 PF01966 HD domain pbN1_34030 PF11871 Domain of unknown function (DUF3391) pbN1_34040 PF00719 Inorganic pyrophosphatase pbN1_34080 PF02540 NAD synthase pbN1_34080 PF00795 Carbon-nitrogen hydrolase pbN1_34090 PF00543 Nitrogen regulatory protein P-II pbN1_34100 PF01713 Smr domain pbN1_34110 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_34120 PF13545 Crp-like helix-turn-helix domain pbN1_34120 PF00027 Cyclic nucleotide-binding domain pbN1_34130 PF09397 Ftsk gamma domain pbN1_34130 PF17854 FtsK alpha domain pbN1_34130 PF01580 FtsK/SpoIIIE family pbN1_34130 PF13491 4TM region of DNA translocase FtsK/SpoIIIE pbN1_34140 PF03548 Outer membrane lipoprotein carrier protein LolA pbN1_34150 PF12002 MgsA AAA+ ATPase C terminal pbN1_34150 PF16193 AAA C-terminal domain pbN1_34150 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_34170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) pbN1_34170 PF02403 Seryl-tRNA synthetase N-terminal domain pbN1_34180 PF01464 Transglycosylase SLT domain pbN1_34180 PF00497 Bacterial extracellular solute-binding proteins, family 3 pbN1_34220 PF10017 Histidine-specific methyltransferase, SAM-dependent pbN1_34240 PF02806 Alpha amylase, C-terminal all-beta domain pbN1_34240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) pbN1_34240 PF00128 Alpha amylase, catalytic domain pbN1_34250 PF00128 Alpha amylase, catalytic domain pbN1_34250 PF11896 Domain of unknown function (DUF3416) pbN1_34260 PF16657 Maltogenic Amylase, C-terminal domain pbN1_34260 PF00128 Alpha amylase, catalytic domain pbN1_34270 PF09411 Lipid A 3-O-deacylase (PagL) pbN1_34290 PF00872 Transposase, Mutator family pbN1_34350 PF02951 Prokaryotic glutathione synthetase, N-terminal domain pbN1_34350 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain pbN1_34370 PF00571 CBS domain pbN1_34390 PF07043 Protein of unknown function (DUF1328) pbN1_34400 PF04972 BON domain pbN1_34410 PF04972 BON domain pbN1_34420 PF13091 PLD-like domain pbN1_34420 PF13396 Phospholipase_D-nuclease N-terminal pbN1_34430 PF01594 AI-2E family transporter pbN1_34450 PF07043 Protein of unknown function (DUF1328) pbN1_34510 PF13396 Phospholipase_D-nuclease N-terminal pbN1_34510 PF13091 PLD-like domain pbN1_34520 PF00210 Ferritin-like domain pbN1_34550 PF04552 Sigma-54, DNA binding domain pbN1_34550 PF00309 Sigma-54 factor, Activator interacting domain (AID) pbN1_34550 PF04963 Sigma-54 factor, core binding domain pbN1_34580 PF00128 Alpha amylase, catalytic domain pbN1_34580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) pbN1_34600 PF00483 Nucleotidyl transferase pbN1_34610 PF11941 Domain of unknown function (DUF3459) pbN1_34610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) pbN1_34610 PF00128 Alpha amylase, catalytic domain pbN1_34620 PF02446 4-alpha-glucanotransferase pbN1_34630 PF08323 Starch synthase catalytic domain pbN1_34630 PF00534 Glycosyl transferases group 1 pbN1_34660 PF02954 Bacterial regulatory protein, Fis family pbN1_34660 PF00158 Sigma-54 interaction domain pbN1_34660 PF00072 Response regulator receiver domain pbN1_34710 PF00512 His Kinase A (phospho-acceptor) domain pbN1_34710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_34740 PF02308 MgtC family pbN1_34770 PF01402 Ribbon-helix-helix protein, copG family pbN1_34790 PF01565 FAD binding domain pbN1_34790 PF08031 Berberine and berberine like pbN1_34800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain pbN1_34800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain pbN1_34820 PF00749 tRNA synthetases class I (E and Q), catalytic domain pbN1_34840 PF00072 Response regulator receiver domain pbN1_34840 PF00196 Bacterial regulatory proteins, luxR family pbN1_34850 PF07730 Histidine kinase pbN1_34850 PF17200 Single Cache domain 2 pbN1_34870 PF01266 FAD dependent oxidoreductase pbN1_34870 PF05430 S-adenosyl-L-methionine-dependent methyltransferase pbN1_34890 PF03707 Bacterial signalling protein N terminal repeat pbN1_34890 PF00990 Diguanylate cyclase, GGDEF domain pbN1_34890 PF00563 EAL domain pbN1_34900 PF00152 tRNA synthetases class II (D, K and N) pbN1_34900 PF01336 OB-fold nucleic acid binding domain pbN1_34910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_34910 PF00672 HAMP domain pbN1_34910 PF02743 Cache domain pbN1_34920 PF03776 Septum formation topological specificity factor MinE pbN1_34930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain pbN1_34940 PF03775 Septum formation inhibitor MinC, C-terminal domain pbN1_34940 PF05209 Septum formation inhibitor MinC, N-terminal domain pbN1_34950 PF01430 Hsp33 protein pbN1_34960 PF17674 HHH domain pbN1_34960 PF00575 S1 RNA binding domain pbN1_34960 PF09371 Tex-like protein N-terminal domain pbN1_34960 PF16921 Tex protein YqgF-like domain pbN1_34980 PF13607 Succinyl-CoA ligase like flavodoxin domain pbN1_34980 PF00583 Acetyltransferase (GNAT) family pbN1_34980 PF13380 CoA binding domain pbN1_35010 PF00581 Rhodanese-like domain pbN1_35020 PF00586 AIR synthase related protein, N-terminal domain pbN1_35020 PF02769 AIR synthase related protein, C-terminal domain pbN1_35030 PF13472 GDSL-like Lipase/Acylhydrolase family pbN1_35040 PF00005 ABC transporter pbN1_35050 PF01593 Flavin containing amine oxidoreductase pbN1_35080 PF12704 MacB-like periplasmic core domain pbN1_35080 PF00005 ABC transporter pbN1_35080 PF02687 FtsX-like permease family pbN1_35120 PF02563 Polysaccharide biosynthesis/export protein pbN1_35120 PF10531 SLBB domain pbN1_35130 PF13614 AAA domain pbN1_35140 PF00684 DnaJ central domain pbN1_35140 PF00226 DnaJ domain pbN1_35140 PF01556 DnaJ C terminal domain pbN1_35190 PF00953 Glycosyl transferase family 4 pbN1_35230 PF01850 PIN domain pbN1_35250 PF10996 Beta-Casp domain pbN1_35250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain pbN1_35250 PF00753 Metallo-beta-lactamase superfamily pbN1_35270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain pbN1_35270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain pbN1_35270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain pbN1_35320 PF01370 NAD dependent epimerase/dehydratase family pbN1_35330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain pbN1_35330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain pbN1_35330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain pbN1_35380 PF00534 Glycosyl transferases group 1 pbN1_35380 PF13477 Glycosyl transferase 4-like pbN1_35390 PF02463 RecF/RecN/SMC N terminal domain pbN1_35400 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family pbN1_35410 PF02719 Polysaccharide biosynthesis protein pbN1_35420 PF02397 Bacterial sugar transferase pbN1_35440 PF02719 Polysaccharide biosynthesis protein pbN1_35450 PF13180 PDZ domain pbN1_35480 PF00145 C-5 cytosine-specific DNA methylase pbN1_35480 PF01381 Helix-turn-helix pbN1_35490 PF00483 Nucleotidyl transferase pbN1_35560 PF09820 Predicted AAA-ATPase pbN1_35560 PF08011 PD-(D/E)XK nuclease superfamily pbN1_35580 PF00816 H-NS histone family pbN1_35590 PF13579 Glycosyl transferase 4-like domain pbN1_35590 PF00534 Glycosyl transferases group 1 pbN1_35620 PF00534 Glycosyl transferases group 1 pbN1_35620 PF13579 Glycosyl transferase 4-like domain pbN1_35650 PF00665 Integrase core domain pbN1_35660 PF01695 IstB-like ATP binding protein pbN1_35700 PF00872 Transposase, Mutator family pbN1_35710 PF01381 Helix-turn-helix pbN1_35710 PF00145 C-5 cytosine-specific DNA methylase pbN1_35720 PF16363 GDP-mannose 4,6 dehydratase pbN1_35750 PF01370 NAD dependent epimerase/dehydratase family pbN1_35770 PF13579 Glycosyl transferase 4-like domain pbN1_35770 PF00534 Glycosyl transferases group 1 pbN1_35790 PF13579 Glycosyl transferase 4-like domain pbN1_35790 PF00534 Glycosyl transferases group 1 pbN1_35830 PF00816 H-NS histone family pbN1_35870 PF03350 Uncharacterized protein family, UPF0114 pbN1_35880 PF08335 GlnD PII-uridylyltransferase pbN1_35880 PF01966 HD domain pbN1_35890 PF00557 Metallopeptidase family M24 pbN1_35910 PF00318 Ribosomal protein S2 pbN1_35920 PF00889 Elongation factor TS pbN1_35930 PF00696 Amino acid kinase family pbN1_35940 PF01765 Ribosome recycling factor pbN1_35950 PF01255 Putative undecaprenyl diphosphate synthase pbN1_35970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase pbN1_35970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain pbN1_35970 PF13288 DXP reductoisomerase C-terminal domain pbN1_35980 PF17820 PDZ domain pbN1_35980 PF02163 Peptidase family M50 pbN1_35980 PF13180 PDZ domain pbN1_35990 PF01103 Surface antigen pbN1_35990 PF07244 Surface antigen variable number repeat pbN1_36010 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_36010 PF14602 Hexapeptide repeat of succinyl-transferase pbN1_36010 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD pbN1_36020 PF07977 FabA-like domain pbN1_36030 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 pbN1_36030 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_36040 PF02684 Lipid-A-disaccharide synthetase pbN1_36050 PF01351 Ribonuclease HII pbN1_36070 PF08032 RNA 2'-O ribose methyltransferase substrate binding pbN1_36070 PF00588 SpoU rRNA Methylase family pbN1_36090 PF08241 Methyltransferase domain pbN1_36100 PF12697 Alpha/beta hydrolase family pbN1_36110 PF00155 Aminotransferase class I and II pbN1_36120 PF00202 Aminotransferase class-III pbN1_36130 PF03883 Peroxide stress protein YaaA pbN1_36140 PF18027 Cytosolic carboxypeptidase N-terminal domain pbN1_36140 PF00246 Zinc carboxypeptidase pbN1_36300 PF00793 DAHP synthetase I family pbN1_36310 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_36310 PF18113 Rubredoxin binding C-terminal domain pbN1_36320 PF00301 Rubredoxin pbN1_36350 PF07311 Dodecin pbN1_36360 PF03707 Bacterial signalling protein N terminal repeat pbN1_36360 PF00990 Diguanylate cyclase, GGDEF domain pbN1_36360 PF00563 EAL domain pbN1_36460 PF07995 Glucose / Sorbosone dehydrogenase pbN1_36500 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system pbN1_36540 PF01609 Transposase DDE domain pbN1_36540 PF05598 Transposase domain (DUF772) pbN1_36560 PF03061 Thioesterase superfamily pbN1_36570 PF09905 DNA-binding protein VF530 pbN1_36610 PF00158 Sigma-54 interaction domain pbN1_36610 PF02954 Bacterial regulatory protein, Fis family pbN1_36610 PF01590 GAF domain pbN1_36620 PF00171 Aldehyde dehydrogenase family pbN1_36640 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_36650 PF00005 ABC transporter pbN1_36660 PF00005 ABC transporter pbN1_36710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III pbN1_36730 PF01590 GAF domain pbN1_36730 PF02954 Bacterial regulatory protein, Fis family pbN1_36730 PF00158 Sigma-54 interaction domain pbN1_36740 PF00593 TonB dependent receptor pbN1_36740 PF07715 TonB-dependent Receptor Plug Domain pbN1_36790 PF04205 FMN-binding domain pbN1_36790 PF12801 4Fe-4S binding domain pbN1_36800 PF00196 Bacterial regulatory proteins, luxR family pbN1_36800 PF00072 Response regulator receiver domain pbN1_36810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_36810 PF07730 Histidine kinase pbN1_36810 PF05231 MASE1 pbN1_36840 PF01011 PQQ enzyme repeat pbN1_36840 PF13360 PQQ-like domain pbN1_36890 PF00999 Sodium/hydrogen exchanger family pbN1_36890 PF02080 TrkA-C domain pbN1_36890 PF03471 Transporter associated domain pbN1_36920 PF00753 Metallo-beta-lactamase superfamily pbN1_36930 PF12848 ABC transporter pbN1_36930 PF00005 ABC transporter pbN1_36940 PF00563 EAL domain pbN1_36940 PF08448 PAS fold pbN1_36940 PF00990 Diguanylate cyclase, GGDEF domain pbN1_36940 PF05231 MASE1 pbN1_36940 PF08447 PAS fold pbN1_36940 PF13426 PAS domain pbN1_36960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) pbN1_36960 PF00364 Biotin-requiring enzyme pbN1_36960 PF02817 e3 binding domain pbN1_36970 PF00970 Oxidoreductase FAD-binding domain pbN1_36970 PF00175 Oxidoreductase NAD-binding domain pbN1_36980 PF03466 LysR substrate binding domain pbN1_36980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_37000 PF00535 Glycosyl transferase family 2 pbN1_37000 PF03552 Cellulose synthase pbN1_37000 PF07238 PilZ domain pbN1_37020 PF02347 Glycine cleavage system P-protein pbN1_37030 PF01597 Glycine cleavage H-protein pbN1_37040 PF01571 Aminomethyltransferase folate-binding domain pbN1_37040 PF08669 Glycine cleavage T-protein C-terminal barrel domain pbN1_37050 PF02811 PHP domain pbN1_37060 PF01300 Telomere recombination pbN1_37070 PF02163 Peptidase family M50 pbN1_37080 PF00579 tRNA synthetases class I (W and Y) pbN1_37090 PF02616 Segregation and condensation protein ScpA pbN1_37100 PF04079 Segregation and condensation complex subunit ScpB pbN1_37110 PF01479 S4 domain pbN1_37110 PF00849 RNA pseudouridylate synthase pbN1_37120 PF10145 Phage-related minor tail protein pbN1_37120 PF01464 Transglycosylase SLT domain pbN1_37120 PF01551 Peptidase family M23 pbN1_37150 PF02769 AIR synthase related protein, C-terminal domain pbN1_37150 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain pbN1_37150 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal pbN1_37180 PF07715 TonB-dependent Receptor Plug Domain pbN1_37180 PF00593 TonB dependent receptor pbN1_37230 PF03061 Thioesterase superfamily pbN1_37250 PF00117 Glutamine amidotransferase class-I pbN1_37250 PF06418 CTP synthase N-terminus pbN1_37260 PF00793 DAHP synthetase I family pbN1_37270 PF03952 Enolase, N-terminal domain pbN1_37270 PF00113 Enolase, C-terminal TIM barrel domain pbN1_37280 PF04977 Septum formation initiator pbN1_37290 PF00571 CBS domain pbN1_37300 PF00877 NlpC/P60 family pbN1_37330 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_37340 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ pbN1_37360 PF01384 Phosphate transporter family pbN1_37380 PF01227 GTP cyclohydrolase I pbN1_37390 PF01636 Phosphotransferase enzyme family pbN1_37410 PF07152 YaeQ protein pbN1_37430 PF01595 Cyclin M transmembrane N-terminal domain pbN1_37430 PF03471 Transporter associated domain pbN1_37430 PF00571 CBS domain pbN1_37440 PF00171 Aldehyde dehydrogenase family pbN1_37480 PF01926 50S ribosome-binding GTPase pbN1_37570 PF00563 EAL domain pbN1_37570 PF03707 Bacterial signalling protein N terminal repeat pbN1_37570 PF00990 Diguanylate cyclase, GGDEF domain pbN1_37570 PF13188 PAS domain pbN1_37590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain pbN1_37590 PF00672 HAMP domain pbN1_37620 PF00690 Cation transporter/ATPase, N-terminus pbN1_37620 PF00689 Cation transporting ATPase, C-terminus pbN1_37640 PF00684 DnaJ central domain pbN1_37640 PF00226 DnaJ domain pbN1_37640 PF01556 DnaJ C terminal domain pbN1_37710 PF11871 Domain of unknown function (DUF3391) pbN1_37710 PF01966 HD domain pbN1_37730 PF11897 Protein of unknown function (DUF3417) pbN1_37730 PF00343 Carbohydrate phosphorylase pbN1_37740 PF08521 Two-component sensor kinase N-terminal pbN1_37740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_37740 PF00512 His Kinase A (phospho-acceptor) domain pbN1_37750 PF00072 Response regulator receiver domain pbN1_37750 PF00486 Transcriptional regulatory protein, C terminal pbN1_37770 PF00106 short chain dehydrogenase pbN1_37790 PF13193 AMP-binding enzyme C-terminal domain pbN1_37790 PF00501 AMP-binding enzyme pbN1_37810 PF00440 Bacterial regulatory proteins, tetR family pbN1_37820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion pbN1_37840 PF00005 ABC transporter pbN1_37850 PF01883 Iron-sulfur cluster assembly protein pbN1_37920 PF12679 ABC-2 family transporter protein pbN1_37930 PF00005 ABC transporter pbN1_37940 PF05048 Periplasmic copper-binding protein (NosD) pbN1_37960 PF12801 4Fe-4S binding domain pbN1_37960 PF04205 FMN-binding domain pbN1_37970 PF18764 Nitrous oxide reductase propeller repeat pbN1_37970 PF13473 Cupredoxin-like domain pbN1_37970 PF18793 Nitrous oxide reductase propeller repeat 2 pbN1_38000 PF00072 Response regulator receiver domain pbN1_38000 PF00196 Bacterial regulatory proteins, luxR family pbN1_38010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_38010 PF00672 HAMP domain pbN1_38010 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term pbN1_38010 PF07730 Histidine kinase pbN1_38020 PF02665 Nitrate reductase gamma subunit pbN1_38030 PF02613 Nitrate reductase delta subunit pbN1_38040 PF13247 4Fe-4S dicluster domain pbN1_38040 PF14711 Respiratory nitrate reductase beta C-terminal pbN1_38050 PF00384 Molybdopterin oxidoreductase pbN1_38050 PF01568 Molydopterin dinucleotide binding domain pbN1_38050 PF14710 Respiratory nitrate reductase alpha N-terminal pbN1_38060 PF07690 Major Facilitator Superfamily pbN1_38070 PF07690 Major Facilitator Superfamily pbN1_38130 PF01053 Cys/Met metabolism PLP-dependent enzyme pbN1_38150 PF00425 chorismate binding enzyme pbN1_38150 PF04715 Anthranilate synthase component I, N terminal region pbN1_38190 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 pbN1_38210 PF01554 MatE pbN1_38230 PF00589 Phage integrase family pbN1_38280 PF03707 Bacterial signalling protein N terminal repeat pbN1_38280 PF00563 EAL domain pbN1_38280 PF00990 Diguanylate cyclase, GGDEF domain pbN1_38300 PF03707 Bacterial signalling protein N terminal repeat pbN1_38300 PF00990 Diguanylate cyclase, GGDEF domain pbN1_38300 PF00563 EAL domain pbN1_38320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_38320 PF08448 PAS fold pbN1_38320 PF13188 PAS domain pbN1_38320 PF00072 Response regulator receiver domain pbN1_38320 PF00512 His Kinase A (phospho-acceptor) domain pbN1_38330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_38330 PF00072 Response regulator receiver domain pbN1_38330 PF08448 PAS fold pbN1_38330 PF00512 His Kinase A (phospho-acceptor) domain pbN1_38330 PF13188 PAS domain pbN1_38340 PF00158 Sigma-54 interaction domain pbN1_38340 PF00072 Response regulator receiver domain pbN1_38340 PF02954 Bacterial regulatory protein, Fis family pbN1_38350 PF00072 Response regulator receiver domain pbN1_38390 PF09587 Bacterial capsule synthesis protein PGA_cap pbN1_38410 PF00012 Hsp70 protein pbN1_38420 PF01556 DnaJ C terminal domain pbN1_38420 PF00684 DnaJ central domain pbN1_38420 PF00226 DnaJ domain pbN1_38470 PF05225 helix-turn-helix, Psq domain pbN1_38470 PF02810 SEC-C motif pbN1_38520 PF00141 Peroxidase pbN1_38540 PF00580 UvrD/REP helicase N-terminal domain pbN1_38540 PF13361 UvrD-like helicase C-terminal domain pbN1_38600 PF13007 Transposase C of IS166 homeodomain pbN1_38600 PF03050 Transposase IS66 family pbN1_38600 PF13817 IS66 C-terminal element pbN1_38600 PF13005 zinc-finger binding domain of transposase IS66 pbN1_38640 PF01555 DNA methylase pbN1_38650 PF02661 Fic/DOC family pbN1_38650 PF13784 Fic/DOC family N-terminal pbN1_38690 PF00355 Rieske [2Fe-2S] domain pbN1_38700 PF01883 Iron-sulfur cluster assembly protein pbN1_38710 PF01592 NifU-like N terminal domain pbN1_38720 PF00266 Aminotransferase class-V pbN1_38730 PF01458 Uncharacterized protein family (UPF0051) pbN1_38740 PF00005 ABC transporter pbN1_38750 PF01458 Uncharacterized protein family (UPF0051) pbN1_38760 PF05362 Lon protease (S16) C-terminal proteolytic domain pbN1_38760 PF13654 AAA domain pbN1_38780 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family pbN1_38780 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain pbN1_38790 PF01161 Phosphatidylethanolamine-binding protein pbN1_38810 PF01048 Phosphorylase superfamily pbN1_38820 PF00679 Elongation factor G C-terminus pbN1_38820 PF00009 Elongation factor Tu GTP binding domain pbN1_38820 PF03144 Elongation factor Tu domain 2 pbN1_38830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component pbN1_38860 PF01494 FAD binding domain pbN1_38870 PF00248 Aldo/keto reductase family pbN1_38880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold pbN1_38900 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase pbN1_38930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase pbN1_38940 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit pbN1_38950 PF04909 Amidohydrolase pbN1_38970 PF03737 Aldolase/RraA pbN1_38980 PF04909 Amidohydrolase pbN1_38990 PF04303 PrpF protein pbN1_39000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_39000 PF03466 LysR substrate binding domain pbN1_39010 PF02397 Bacterial sugar transferase pbN1_39050 PF10531 SLBB domain pbN1_39050 PF18412 Outer-membrane lipoprotein Wza C-terminal domain pbN1_39050 PF02563 Polysaccharide biosynthesis/export protein pbN1_39070 PF13614 AAA domain pbN1_39090 PF00534 Glycosyl transferases group 1 pbN1_39090 PF13439 Glycosyltransferase Family 4 pbN1_39100 PF00150 Cellulase (glycosyl hydrolase family 5) pbN1_39120 PF13439 Glycosyltransferase Family 4 pbN1_39120 PF00534 Glycosyl transferases group 1 pbN1_39150 PF00535 Glycosyl transferase family 2 pbN1_39170 PF04230 Polysaccharide pyruvyl transferase pbN1_39190 PF00483 Nucleotidyl transferase pbN1_39200 PF00533 BRCA1 C Terminus (BRCT) domain pbN1_39200 PF01653 NAD-dependent DNA ligase adenylation domain pbN1_39200 PF03120 NAD-dependent DNA ligase OB-fold domain pbN1_39200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain pbN1_39200 PF12826 Helix-hairpin-helix motif pbN1_39220 PF02463 RecF/RecN/SMC N terminal domain pbN1_39230 PF00155 Aminotransferase class I and II pbN1_39240 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal pbN1_39240 PF14602 Hexapeptide repeat of succinyl-transferase pbN1_39240 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_39250 PF00437 Type II/IV secretion system protein pbN1_39260 PF01546 Peptidase family M20/M25/M40 pbN1_39260 PF07687 Peptidase dimerisation domain pbN1_39270 PF05175 Methyltransferase small domain pbN1_39280 PF00072 Response regulator receiver domain pbN1_39290 PF00255 Glutathione peroxidase pbN1_39300 PF04384 Iron-sulphur cluster assembly pbN1_39310 PF00111 2Fe-2S iron-sulfur cluster binding domain pbN1_39320 PF00012 Hsp70 protein pbN1_39330 PF07743 HSCB C-terminal oligomerisation domain pbN1_39340 PF01521 Iron-sulphur cluster biosynthesis pbN1_39350 PF01592 NifU-like N terminal domain pbN1_39360 PF00266 Aminotransferase class-V pbN1_39370 PF00266 Aminotransferase class-V pbN1_39380 PF02082 Transcriptional regulator pbN1_39390 PF00132 Bacterial transferase hexapeptide (six repeats) pbN1_39400 PF00588 SpoU rRNA Methylase family pbN1_39410 PF00459 Inositol monophosphatase family pbN1_39430 PF00916 Sulfate permease family pbN1_39430 PF01740 STAS domain pbN1_39440 PF00117 Glutamine amidotransferase class-I pbN1_39440 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain pbN1_39450 PF07690 Major Facilitator Superfamily pbN1_39510 PF00977 Histidine biosynthesis protein pbN1_39540 PF01568 Molydopterin dinucleotide binding domain pbN1_39540 PF00384 Molybdopterin oxidoreductase pbN1_39540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain pbN1_39540 PF10518 TAT (twin-arginine translocation) pathway signal sequence pbN1_39560 PF13247 4Fe-4S dicluster domain pbN1_39590 PF00989 PAS fold pbN1_39590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_39590 PF00512 His Kinase A (phospho-acceptor) domain pbN1_39600 PF00072 Response regulator receiver domain pbN1_39600 PF00158 Sigma-54 interaction domain pbN1_39600 PF02954 Bacterial regulatory protein, Fis family pbN1_39610 PF00690 Cation transporter/ATPase, N-terminus pbN1_39610 PF00689 Cation transporting ATPase, C-terminus pbN1_39630 PF01139 tRNA-splicing ligase RtcB pbN1_39660 PF17862 AAA+ lid domain pbN1_39660 PF01434 Peptidase family M41 pbN1_39660 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_39690 PF00501 AMP-binding enzyme pbN1_39690 PF13193 AMP-binding enzyme C-terminal domain pbN1_39700 PF00676 Dehydrogenase E1 component pbN1_39710 PF02779 Transketolase, pyrimidine binding domain pbN1_39710 PF02780 Transketolase, C-terminal domain pbN1_39710 PF00364 Biotin-requiring enzyme pbN1_39720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) pbN1_39720 PF00364 Biotin-requiring enzyme pbN1_39720 PF02817 e3 binding domain pbN1_39760 PF00488 MutS domain V pbN1_39760 PF05190 MutS family domain IV pbN1_39760 PF05188 MutS domain II pbN1_39760 PF05192 MutS domain III pbN1_39760 PF01624 MutS domain I pbN1_39780 PF00929 Exonuclease pbN1_39790 PF00075 RNase H pbN1_39800 PF08241 Methyltransferase domain pbN1_39810 PF16123 Hydroxyacylglutathione hydrolase C-terminus pbN1_39810 PF00753 Metallo-beta-lactamase superfamily pbN1_39820 PF01476 LysM domain pbN1_39820 PF01464 Transglycosylase SLT domain pbN1_39830 PF00005 ABC transporter pbN1_39830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region pbN1_39840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase pbN1_39850 PF00578 AhpC/TSA family pbN1_39860 PF12852 Cupin pbN1_39860 PF12833 Helix-turn-helix domain pbN1_39870 PF13649 Methyltransferase domain pbN1_39880 PF03707 Bacterial signalling protein N terminal repeat pbN1_39880 PF00990 Diguanylate cyclase, GGDEF domain pbN1_39880 PF00563 EAL domain pbN1_39890 PF00072 Response regulator receiver domain pbN1_39890 PF00486 Transcriptional regulatory protein, C terminal pbN1_39900 PF00512 His Kinase A (phospho-acceptor) domain pbN1_39900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_39910 PF18073 Rubredoxin metal binding domain pbN1_39920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_39920 PF03466 LysR substrate binding domain pbN1_39930 PF07690 Major Facilitator Superfamily pbN1_39940 PF03167 Uracil DNA glycosylase superfamily pbN1_39950 PF00583 Acetyltransferase (GNAT) family pbN1_39960 PF00814 Glycoprotease family pbN1_39980 PF00072 Response regulator receiver domain pbN1_39980 PF00486 Transcriptional regulatory protein, C terminal pbN1_39990 PF00672 HAMP domain pbN1_39990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_39990 PF00512 His Kinase A (phospho-acceptor) domain pbN1_40000 PF04279 Intracellular septation protein A pbN1_40010 PF03795 YCII-related domain pbN1_40040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_40040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_40040 PF12806 Acetyl-CoA dehydrogenase C-terminal like pbN1_40040 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_40060 PF01012 Electron transfer flavoprotein domain pbN1_40060 PF00766 Electron transfer flavoprotein FAD-binding domain pbN1_40070 PF01012 Electron transfer flavoprotein domain pbN1_40080 PF08361 MAATS-type transcriptional repressor, C-terminal region pbN1_40080 PF00440 Bacterial regulatory proteins, tetR family pbN1_40090 PF01026 TatD related DNase pbN1_40100 PF00378 Enoyl-CoA hydratase/isomerase pbN1_40110 PF13193 AMP-binding enzyme C-terminal domain pbN1_40110 PF00501 AMP-binding enzyme pbN1_40140 PF00005 ABC transporter pbN1_40150 PF02405 Permease MlaE pbN1_40160 PF02541 Ppx/GppA phosphatase family pbN1_40170 PF17941 Polyphosphate kinase C-terminal domain 1 pbN1_40170 PF13089 Polyphosphate kinase N-terminal domain pbN1_40170 PF02503 Polyphosphate kinase middle domain pbN1_40170 PF13090 Polyphosphate kinase C-terminal domain 2 pbN1_40190 PF00436 Single-strand binding protein family pbN1_40300 PF13291 ACT domain pbN1_40300 PF04607 Region found in RelA / SpoT proteins pbN1_40300 PF02824 TGS domain pbN1_40360 PF00043 Glutathione S-transferase, C-terminal domain pbN1_40360 PF13417 Glutathione S-transferase, N-terminal domain pbN1_40370 PF02834 LigT like Phosphoesterase pbN1_40380 PF02542 YgbB family pbN1_40390 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase pbN1_40400 PF00205 Thiamine pyrophosphate enzyme, central domain pbN1_40400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain pbN1_40400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain pbN1_40410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain pbN1_40410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain pbN1_40440 PF01875 Memo-like protein pbN1_40450 PF01871 AMMECR1 pbN1_40480 PF02559 CarD-like/TRCF domain pbN1_40480 PF00270 DEAD/DEAH box helicase pbN1_40480 PF03461 TRCF domain pbN1_40480 PF17757 UvrB interaction domain pbN1_40480 PF00271 Helicase conserved C-terminal domain pbN1_40510 PF13495 Phage integrase, N-terminal SAM-like domain pbN1_40510 PF00589 Phage integrase family pbN1_40590 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system pbN1_40660 PF00550 Phosphopantetheine attachment site pbN1_40670 PF00501 AMP-binding enzyme pbN1_40680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region pbN1_40690 PF02885 Glycosyl transferase family, helical bundle domain pbN1_40690 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain pbN1_40690 PF00591 Glycosyl transferase family, a/b domain pbN1_40700 PF01791 DeoC/LacD family aldolase pbN1_40720 PF02811 PHP domain pbN1_40720 PF14716 Helix-hairpin-helix domain pbN1_40720 PF14791 DNA polymerase beta thumb pbN1_40770 PF02540 NAD synthase pbN1_40770 PF00958 GMP synthase C terminal domain pbN1_40770 PF00117 Glutamine amidotransferase class-I pbN1_40780 PF00478 IMP dehydrogenase / GMP reductase domain pbN1_40780 PF00571 CBS domain pbN1_40800 PF03658 RnfH family Ubiquitin pbN1_40810 PF03364 Polyketide cyclase / dehydrase and lipid transport pbN1_40820 PF01668 SmpB protein pbN1_40830 PF02696 Uncharacterized ACR, YdiU/UPF0061 family pbN1_40840 PF04679 ATP dependent DNA ligase C terminal region pbN1_40840 PF01068 ATP dependent DNA ligase domain pbN1_40840 PF13298 DNA polymerase Ligase (LigD) pbN1_40850 PF02735 Ku70/Ku80 beta-barrel domain pbN1_40860 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_40860 PF12911 N-terminal TM domain of oligopeptide transport permease C pbN1_40870 PF00528 Binding-protein-dependent transport system inner membrane component pbN1_40880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle pbN1_40910 PF10431 C-terminal, D2-small domain, of ClpB protein pbN1_40910 PF02861 Clp amino terminal domain, pathogenicity island component pbN1_40910 PF17871 AAA lid domain pbN1_40910 PF00004 ATPase family associated with various cellular activities (AAA) pbN1_40910 PF07724 AAA domain (Cdc48 subfamily) pbN1_40930 PF02391 MoaE protein pbN1_40940 PF02597 ThiS family pbN1_40950 PF03454 MoeA C-terminal region (domain IV) pbN1_40950 PF03453 MoeA N-terminal region (domain I and II) pbN1_40950 PF00994 Probable molybdopterin binding domain pbN1_40960 PF03205 Molybdopterin guanine dinucleotide synthesis protein B pbN1_40980 PF04851 Type III restriction enzyme, res subunit pbN1_40980 PF13307 Helicase C-terminal domain pbN1_40990 PF08241 Methyltransferase domain pbN1_41000 PF03969 AFG1-like ATPase pbN1_41010 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_41010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain pbN1_41020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) pbN1_41020 PF00364 Biotin-requiring enzyme pbN1_41020 PF02817 e3 binding domain pbN1_41030 PF02779 Transketolase, pyrimidine binding domain pbN1_41030 PF16078 2-oxoglutarate dehydrogenase N-terminus pbN1_41030 PF16870 2-oxoglutarate dehydrogenase C-terminal pbN1_41030 PF00676 Dehydrogenase E1 component pbN1_41040 PF00285 Citrate synthase, C-terminal domain pbN1_41060 PF13085 2Fe-2S iron-sulfur cluster binding domain pbN1_41070 PF02910 Fumarate reductase flavoprotein C-term pbN1_41070 PF00890 FAD binding domain pbN1_41100 PF07702 UTRA domain pbN1_41100 PF00392 Bacterial regulatory proteins, gntR family pbN1_41110 PF00056 lactate/malate dehydrogenase, NAD binding domain pbN1_41110 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain pbN1_41130 PF01176 Translation initiation factor 1A / IF-1 pbN1_41140 PF00211 Adenylate and Guanylate cyclase catalytic domain pbN1_41160 PF00005 ABC transporter pbN1_41160 PF00664 ABC transporter transmembrane region pbN1_41170 PF13188 PAS domain pbN1_41170 PF03707 Bacterial signalling protein N terminal repeat pbN1_41170 PF00990 Diguanylate cyclase, GGDEF domain pbN1_41170 PF00563 EAL domain pbN1_41180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family pbN1_41180 PF03466 LysR substrate binding domain pbN1_41200 PF02515 CoA-transferase family III pbN1_41210 PF03480 Bacterial extracellular solute-binding protein, family 7 pbN1_41220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component pbN1_41240 PF00378 Enoyl-CoA hydratase/isomerase pbN1_41260 PF02803 Thiolase, C-terminal domain pbN1_41260 PF00108 Thiolase, N-terminal domain pbN1_41300 PF00005 ABC transporter pbN1_41330 PF07715 TonB-dependent Receptor Plug Domain pbN1_41330 PF00593 TonB dependent receptor pbN1_41380 PF00665 Integrase core domain pbN1_41390 PF01695 IstB-like ATP binding protein pbN1_41470 PF06250 YhcG PDDEXK nuclease domain pbN1_41470 PF17761 DUF1016 N-terminal domain pbN1_41490 PF00717 Peptidase S24-like pbN1_41490 PF01381 Helix-turn-helix pbN1_41520 PF02371 Transposase IS116/IS110/IS902 family pbN1_41520 PF01548 Transposase pbN1_41550 PF13005 zinc-finger binding domain of transposase IS66 pbN1_41550 PF13007 Transposase C of IS166 homeodomain pbN1_41550 PF13817 IS66 C-terminal element pbN1_41550 PF03050 Transposase IS66 family pbN1_41560 PF00171 Aldehyde dehydrogenase family pbN1_41580 PF03176 MMPL family pbN1_41600 PF07044 Protein of unknown function (DUF1329) pbN1_41620 PF00034 Cytochrome c pbN1_41630 PF01593 Flavin containing amine oxidoreductase pbN1_41650 PF14525 AraC-binding-like domain pbN1_41650 PF12833 Helix-turn-helix domain pbN1_41670 PF00665 Integrase core domain pbN1_41680 PF01695 IstB-like ATP binding protein pbN1_41700 PF01381 Helix-turn-helix pbN1_41710 PF04752 ChaC-like protein pbN1_41720 PF00108 Thiolase, N-terminal domain pbN1_41720 PF02803 Thiolase, C-terminal domain pbN1_41730 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain pbN1_41730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain pbN1_41730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain pbN1_41740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_41740 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_41740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_41750 PF01012 Electron transfer flavoprotein domain pbN1_41760 PF00766 Electron transfer flavoprotein FAD-binding domain pbN1_41760 PF01012 Electron transfer flavoprotein domain pbN1_41810 PF00753 Metallo-beta-lactamase superfamily pbN1_41820 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain pbN1_41820 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain pbN1_41840 PF02653 Branched-chain amino acid transport system / permease component pbN1_41860 PF00005 ABC transporter pbN1_41870 PF00005 ABC transporter pbN1_41880 PF00107 Zinc-binding dehydrogenase pbN1_41880 PF08240 Alcohol dehydrogenase GroES-like domain pbN1_41890 PF00378 Enoyl-CoA hydratase/isomerase pbN1_41900 PF00378 Enoyl-CoA hydratase/isomerase pbN1_41920 PF13193 AMP-binding enzyme C-terminal domain pbN1_41920 PF00501 AMP-binding enzyme pbN1_41930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family pbN1_41930 PF07992 Pyridine nucleotide-disulphide oxidoreductase pbN1_41940 PF12806 Acetyl-CoA dehydrogenase C-terminal like pbN1_41940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain pbN1_41940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain pbN1_41940 PF02770 Acyl-CoA dehydrogenase, middle domain pbN1_41950 PF00378 Enoyl-CoA hydratase/isomerase pbN1_41960 PF12802 MarR family pbN1_41970 PF00291 Pyridoxal-phosphate dependent enzyme pbN1_41970 PF00585 C-terminal regulatory domain of Threonine dehydratase pbN1_41980 PF00106 short chain dehydrogenase pbN1_41990 PF00108 Thiolase, N-terminal domain pbN1_41990 PF02803 Thiolase, C-terminal domain pbN1_42000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase pbN1_42000 PF13188 PAS domain pbN1_42000 PF13426 PAS domain pbN1_42030 PF00196 Bacterial regulatory proteins, luxR family pbN1_42030 PF00072 Response regulator receiver domain pbN1_42040 PF02492 CobW/HypB/UreG, nucleotide-binding domain pbN1_42040 PF07683 Cobalamin synthesis protein cobW C-terminal domain