AC20117_00045	SM00529	Helix-turn-helix diphteria tox regulatory element
AC20117_00045	SM00899	AC20117_00045
AC20117_00065	SM01043	Bacterial transcriptional activator domain
AC20117_00095	SM00382	ATPases associated with a variety of cellular activities
AC20117_00105	SM00937	AC20117_00105
AC20117_00145	SM00382	ATPases associated with a variety of cellular activities
AC20117_00205	SM00984	UDP binding domain
AC20117_00210	SM00240	Forkhead associated domain
AC20117_00210	SM00382	ATPases associated with a variety of cellular activities
AC20117_00225	SM00387	Histidine kinase-like ATPases
AC20117_00265	SM00957	SecA DEAD-like domain
AC20117_00265	SM00958	SecA preprotein cross-linking domain
AC20117_00285	SM00909	Sporulation and spore germination
AC20117_00290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC20117_00290	SM00387	Histidine kinase-like ATPases
AC20117_00290	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_00295	SM00448	cheY-homologous receiver domain
AC20117_00295	SM00862	Transcriptional regulatory protein, C terminal
AC20117_00335	SM00830	Chorismate mutase type II
AC20117_00370	SM00271	DnaJ molecular chaperone homology domain
AC20117_00390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC20117_00435	SM00341	Helicase and RNase D C-terminal
AC20117_00465	SM00479	AC20117_00465
AC20117_00470	SM00382	ATPases associated with a variety of cellular activities
AC20117_00470	SM00930	AC20117_00470
AC20117_00495	SM01004	Delta-aminolevulinic acid dehydratase
AC20117_00535	SM00450	Rhodanese Homology Domain
AC20117_00585	SM00955	AC20117_00585
AC20117_00590	SM00487	DEAD-like helicases superfamily
AC20117_00590	SM00490	helicase superfamily c-terminal domain
AC20117_00605	SM00481	DNA polymerase alpha chain like domain
AC20117_00610	SM01011	Aminopeptidase P, N-terminal domain
AC20117_00620	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC20117_00620	SM00924	MgtE intracellular N domain
AC20117_00680	SM00382	ATPases associated with a variety of cellular activities
AC20117_00685	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_00685	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC20117_00745	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_00755	SM00838	Elongation factor G C-terminus
AC20117_00760	SM00382	ATPases associated with a variety of cellular activities
AC20117_00785	SM00382	ATPases associated with a variety of cellular activities
AC20117_00875	SM00382	ATPases associated with a variety of cellular activities
AC20117_00885	SM00028	Tetratricopeptide repeats
AC20117_00895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC20117_00895	SM00387	Histidine kinase-like ATPases
AC20117_00895	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_00900	SM00448	cheY-homologous receiver domain
AC20117_00900	SM00862	Transcriptional regulatory protein, C terminal
AC20117_00930	SM00834	Putative regulatory protein
AC20117_00935	SM00858	AC20117_00935
AC20117_00970	SM01240	AC20117_00970
AC20117_00980	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC20117_00980	SM01240	AC20117_00980
AC20117_00995	SM00883	Chaperonin 10 Kd subunit
AC20117_01015	SM00382	ATPases associated with a variety of cellular activities
AC20117_01025	SM00100	Cyclic nucleotide-monophosphate binding domain
AC20117_01025	SM00419	helix_turn_helix, cAMP Regulatory protein
AC20117_01195	SM00642	Alpha-amylase domain
AC20117_01200	SM00642	Alpha-amylase domain
AC20117_01205	SM00642	Alpha-amylase domain
AC20117_01390	SM00662	RNA polymerases D
AC20117_01410	SM00316	Ribosomal protein S1-like RNA-binding domain
AC20117_01425	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_01505	SM01374	AC20117_01505
AC20117_01525	SM00322	K homology RNA-binding domain
AC20117_01540	SM01382	AC20117_01540
AC20117_01540	SM01383	AC20117_01540
AC20117_01560	SM01403	AC20117_01560
AC20117_01585	SM00838	Elongation factor G C-terminus
AC20117_01585	SM00889	Elongation factor G, domain IV
AC20117_01610	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_01615	SM00882	Coenzyme A transferase
AC20117_01620	SM00882	Coenzyme A transferase
AC20117_01640	SM00998	Adenylosuccinate lyase C-terminus
AC20117_01660	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_01665	SM00663	RNA polymerase I subunit A N-terminus
AC20117_01710	SM00649	Ribosomal protein L11/L12
AC20117_01715	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AC20117_01735	SM00421	helix_turn_helix, Lux Regulon
AC20117_01735	SM00448	cheY-homologous receiver domain
AC20117_01785	SM00862	Transcriptional regulatory protein, C terminal
AC20117_01800	SM00855	Phosphoglycerate mutase family
AC20117_01825	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC20117_01905	SM00382	ATPases associated with a variety of cellular activities
AC20117_01925	SM00487	DEAD-like helicases superfamily
AC20117_01925	SM00490	helicase superfamily c-terminal domain
AC20117_01980	SM00740	AC20117_01980
AC20117_02000	SM00855	Phosphoglycerate mutase family
AC20117_02030	SM01060	AC20117_02030
AC20117_02035	SM00248	ankyrin repeats
AC20117_02120	SM00382	ATPases associated with a variety of cellular activities
AC20117_02180	SM00382	ATPases associated with a variety of cellular activities
AC20117_02230	SM00959	Rho termination factor, N-terminal domain
AC20117_02255	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_02255	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC20117_02265	SM00382	ATPases associated with a variety of cellular activities
AC20117_02285	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_02290	SM00014	Acid phosphatase homologues
AC20117_02300	SM00849	Metallo-beta-lactamase superfamily
AC20117_02310	SM00507	HNH nucleases
AC20117_02325	SM00344	helix_turn_helix ASNC type
AC20117_02440	SM00382	ATPases associated with a variety of cellular activities
AC20117_02500	SM00855	Phosphoglycerate mutase family
AC20117_02505	SM00867	YceI-like domain 
AC20117_02515	SM00881	CoA binding domain
AC20117_02530	SM01155	AC20117_02530
AC20117_02555	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC20117_02560	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_02590	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AC20117_02590	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AC20117_02590	SM00493	AC20117_02590
AC20117_02595	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_02610	SM00450	Rhodanese Homology Domain
AC20117_02620	SM00487	DEAD-like helicases superfamily
AC20117_02620	SM00490	helicase superfamily c-terminal domain
AC20117_02660	SM00482	DNA polymerase A domain
AC20117_02670	SM00478	endonuclease III
AC20117_02670	SM00525	AC20117_02670
AC20117_02700	SM00100	Cyclic nucleotide-monophosphate binding domain
AC20117_02700	SM00419	helix_turn_helix, cAMP Regulatory protein
AC20117_02750	SM01209	AC20117_02750
AC20117_02750	SM01210	AC20117_02750
AC20117_02795	SM00382	ATPases associated with a variety of cellular activities
AC20117_02795	SM01086	C-terminal, D2-small domain, of ClpB protein
AC20117_02810	SM00867	YceI-like domain 
AC20117_02825	SM00487	DEAD-like helicases superfamily
AC20117_02825	SM00490	helicase superfamily c-terminal domain
AC20117_02855	SM00422	helix_turn_helix, mercury resistance
AC20117_02860	SM00271	DnaJ molecular chaperone homology domain
AC20117_02900	SM00226	Low molecular weight phosphatase family
AC20117_02920	SM00155	Phospholipase D. Active site motifs.
AC20117_02935	SM00450	Rhodanese Homology Domain
AC20117_02950	SM00382	ATPases associated with a variety of cellular activities
AC20117_03045	SM00382	ATPases associated with a variety of cellular activities
AC20117_03090	SM00411	bacterial (prokaryotic) histone like domain
AC20117_03110	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_03145	SM00382	ATPases associated with a variety of cellular activities
AC20117_03175	SM00954	Region found in RelA / SpoT proteins
AC20117_03245	SM00478	endonuclease III
AC20117_03245	SM01009	AlkA N-terminal domain
AC20117_03345	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_03355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_03365	SM00354	helix_turn _helix lactose operon repressor
AC20117_03485	SM00903	Flavin reductase like domain
AC20117_03500	SM00507	HNH nucleases
AC20117_03555	SM00344	helix_turn_helix ASNC type
AC20117_03580	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AC20117_03615	SM00091	PAS domain
AC20117_03615	SM00387	Histidine kinase-like ATPases
AC20117_03620	SM00448	cheY-homologous receiver domain
AC20117_03650	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AC20117_03650	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AC20117_03660	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_03660	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC20117_03670	SM00382	ATPases associated with a variety of cellular activities
AC20117_03730	SM00903	Flavin reductase like domain
AC20117_03740	SM01130	AC20117_03740
AC20117_03745	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_03760	SM00382	ATPases associated with a variety of cellular activities
AC20117_03765	SM00382	ATPases associated with a variety of cellular activities
AC20117_03795	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_03805	SM00363	S4 RNA-binding domain
AC20117_03855	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_03955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_03955	SM00895	AC20117_03955
AC20117_03980	SM00382	ATPases associated with a variety of cellular activities
AC20117_04010	SM00382	ATPases associated with a variety of cellular activities
AC20117_04055	SM00421	helix_turn_helix, Lux Regulon
AC20117_04080	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_04110	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC20117_04125	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_04140	SM00248	ankyrin repeats
AC20117_04145	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_04190	SM00382	ATPases associated with a variety of cellular activities
AC20117_04265	SM00507	HNH nucleases
AC20117_04270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_04270	SM00895	AC20117_04270
AC20117_04275	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AC20117_04275	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AC20117_04315	SM00855	Phosphoglycerate mutase family
AC20117_04330	SM00642	Alpha-amylase domain
AC20117_04355	SM00421	helix_turn_helix, Lux Regulon
AC20117_04405	SM00382	ATPases associated with a variety of cellular activities
AC20117_04410	SM00354	helix_turn _helix lactose operon repressor
AC20117_04430	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_04455	SM00829	Enoylreductase
AC20117_04500	SM00829	Enoylreductase
AC20117_04505	SM00481	DNA polymerase alpha chain like domain
AC20117_04510	SM00422	helix_turn_helix, mercury resistance
AC20117_04540	SM00421	helix_turn_helix, Lux Regulon
AC20117_04555	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_04570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_04570	SM00895	AC20117_04570
AC20117_04600	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_04620	SM00387	Histidine kinase-like ATPases
AC20117_04625	SM00448	cheY-homologous receiver domain
AC20117_04670	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC20117_04680	SM00861	Transketolase, pyrimidine binding domain
AC20117_04695	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_04700	SM00882	Coenzyme A transferase
AC20117_04705	SM00882	Coenzyme A transferase
AC20117_04720	SM00893	Electron transfer flavoprotein domain
AC20117_04725	SM00893	Electron transfer flavoprotein domain
AC20117_04750	SM00450	Rhodanese Homology Domain
AC20117_04750	SM00849	Metallo-beta-lactamase superfamily
AC20117_04760	SM00450	Rhodanese Homology Domain
AC20117_04765	SM00450	Rhodanese Homology Domain
AC20117_04825	SM01329	AC20117_04825
AC20117_04860	SM00344	helix_turn_helix ASNC type
AC20117_04900	SM00872	Alpha mannosidase, middle domain
AC20117_04940	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_04945	SM00903	Flavin reductase like domain
AC20117_04990	SM00421	helix_turn_helix, Lux Regulon
AC20117_05000	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_05055	SM00357	Cold shock protein domain
AC20117_05135	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AC20117_05180	SM00344	helix_turn_helix ASNC type
AC20117_05230	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_05250	SM00822	AC20117_05250
AC20117_05255	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_05260	SM00382	ATPases associated with a variety of cellular activities
AC20117_05275	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_05300	SM00421	helix_turn_helix, Lux Regulon
AC20117_05325	SM00861	Transketolase, pyrimidine binding domain
AC20117_05410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_05415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_05415	SM00895	AC20117_05415
AC20117_05445	SM01130	AC20117_05445
AC20117_05455	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_05465	SM00477	DNA/RNA non-specific endonuclease
AC20117_05465	SM00892	DNA/RNA non-specific endonuclease
AC20117_05480	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AC20117_05485	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC20117_05500	SM00226	Low molecular weight phosphatase family
AC20117_05505	SM00226	Low molecular weight phosphatase family
AC20117_05600	SM00382	ATPases associated with a variety of cellular activities
AC20117_05635	SM01266	AC20117_05635
AC20117_05640	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AC20117_05640	SM00475	5'-3' exonuclease
AC20117_05690	SM00382	ATPases associated with a variety of cellular activities
AC20117_05695	SM00382	ATPases associated with a variety of cellular activities
AC20117_05700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC20117_05795	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_05815	SM00919	Malic enzyme, NAD binding domain
AC20117_05815	SM01274	AC20117_05815
AC20117_05820	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_05845	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC20117_05945	SM00095	Transthyretin
AC20117_05965	SM00822	AC20117_05965
AC20117_05995	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_06020	SM00257	Lysin motif
AC20117_06040	SM01091	Transporter associated domain
AC20117_06070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_06070	SM00866	AC20117_06070
AC20117_06100	SM00849	Metallo-beta-lactamase superfamily
AC20117_06105	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AC20117_06200	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
AC20117_06200	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AC20117_06255	SM00421	helix_turn_helix, Lux Regulon
AC20117_06255	SM00448	cheY-homologous receiver domain
AC20117_06270	SM00382	ATPases associated with a variety of cellular activities
AC20117_06280	SM00382	ATPases associated with a variety of cellular activities
AC20117_06290	SM00421	helix_turn_helix, Lux Regulon
AC20117_06310	SM00421	helix_turn_helix, Lux Regulon
AC20117_06310	SM00448	cheY-homologous receiver domain
AC20117_06325	SM00382	ATPases associated with a variety of cellular activities
AC20117_06375	SM01060	AC20117_06375
AC20117_06440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_06440	SM00895	AC20117_06440
AC20117_06510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_06510	SM00895	AC20117_06510
AC20117_06515	SM00878	Biotin carboxylase C-terminal domain
AC20117_06520	SM00796	Allophanate hydrolase subunit 1
AC20117_06520	SM00797	Allophanate hydrolase subunit 2
AC20117_06540	SM00422	helix_turn_helix, mercury resistance
AC20117_06585	SM00829	Enoylreductase
AC20117_06650	SM00344	helix_turn_helix ASNC type
AC20117_06655	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_06660	SM00382	ATPases associated with a variety of cellular activities
AC20117_06735	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_06755	SM00849	Metallo-beta-lactamase superfamily
AC20117_06775	SM00849	Metallo-beta-lactamase superfamily
AC20117_06790	SM00382	ATPases associated with a variety of cellular activities
AC20117_06795	SM00382	ATPases associated with a variety of cellular activities
AC20117_06865	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_06935	SM00382	ATPases associated with a variety of cellular activities
AC20117_06940	SM00382	ATPases associated with a variety of cellular activities
AC20117_06950	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_06980	SM00857	Resolvase, N terminal domain
AC20117_07030	SM01043	Bacterial transcriptional activator domain
AC20117_07035	SM00823	Phosphopantetheine attachment site
AC20117_07040	SM00235	Zinc-dependent metalloprotease
AC20117_07055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_07095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_07135	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC20117_07225	SM00855	Phosphoglycerate mutase family
AC20117_07270	SM00855	Phosphoglycerate mutase family
AC20117_07275	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC20117_07305	SM00646	AC20117_07305
AC20117_07315	SM00470	ParB-like nuclease domain
AC20117_07330	SM00393	Putative single-stranded nucleic acids-binding domain
AC20117_07340	SM01234	AC20117_07340
AC20117_07355	SM00382	ATPases associated with a variety of cellular activities
AC20117_07355	SM00760	Bacterial dnaA protein helix-turn-helix domain
AC20117_07360	SM00480	DNA polymerase III beta subunit
AC20117_07365	SM01350	AC20117_07365
AC20117_07380	SM00387	Histidine kinase-like ATPases
AC20117_07380	SM00433	TopoisomeraseII
AC20117_07385	SM00434	DNA Topoisomerase IV
AC20117_07430	SM00919	Malic enzyme, NAD binding domain
AC20117_07430	SM01274	AC20117_07430
AC20117_07450	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_07450	SM00740	AC20117_07450
AC20117_07455	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_07455	SM00740	AC20117_07455
AC20117_07470	SM00331	Sigma factor PP2C-like phosphatases
AC20117_07470	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AC20117_07475	SM00240	Forkhead associated domain
AC20117_07480	SM00240	Forkhead associated domain
AC20117_07515	SM00867	YceI-like domain 
AC20117_07555	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AC20117_07570	SM00354	helix_turn _helix lactose operon repressor
AC20117_07640	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_07650	SM00226	Low molecular weight phosphatase family
AC20117_07690	SM00450	Rhodanese Homology Domain
AC20117_07705	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AC20117_07765	SM00382	ATPases associated with a variety of cellular activities
AC20117_07780	SM00905	Dihydroneopterin aldolase
AC20117_07825	SM00382	ATPases associated with a variety of cellular activities
AC20117_07825	SM01086	C-terminal, D2-small domain, of ClpB protein
AC20117_07855	SM00478	endonuclease III
AC20117_07855	SM00525	AC20117_07855
AC20117_07870	SM00382	ATPases associated with a variety of cellular activities
AC20117_07895	SM00382	ATPases associated with a variety of cellular activities
AC20117_07965	SM00988	UreE urease accessory protein, N-terminal domain
AC20117_08030	SM00420	helix_turn_helix, Deoxyribose operon repressor
AC20117_08030	SM01134	AC20117_08030
AC20117_08200	SM00354	helix_turn _helix lactose operon repressor
AC20117_08260	SM00382	ATPases associated with a variety of cellular activities
AC20117_08325	SM00788	Adenylosuccinate synthetase
AC20117_08350	SM00060	Fibronectin type 3 domain
AC20117_08355	SM00881	CoA binding domain
AC20117_08390	SM00382	ATPases associated with a variety of cellular activities
AC20117_08400	SM00881	CoA binding domain
AC20117_08465	SM01211	AC20117_08465
AC20117_08490	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_08510	SM00382	ATPases associated with a variety of cellular activities
AC20117_08525	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_08530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_08530	SM00895	AC20117_08530
AC20117_08535	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC20117_08535	SM00493	AC20117_08535
AC20117_08540	SM00382	ATPases associated with a variety of cellular activities
AC20117_08630	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_08650	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_08660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_08665	SM01005	Alanine racemase, C-terminal domain
AC20117_08710	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_08735	SM00344	helix_turn_helix ASNC type
AC20117_08755	SM00327	von Willebrand factor (vWF) type A domain
AC20117_08785	SM00894	Excalibur calcium-binding domain
AC20117_08870	SM00870	AC20117_08870
AC20117_08910	SM00354	helix_turn _helix lactose operon repressor
AC20117_08915	SM00903	Flavin reductase like domain
AC20117_08950	SM00422	helix_turn_helix, mercury resistance
AC20117_08950	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_09035	SM00382	ATPases associated with a variety of cellular activities
AC20117_09060	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_09085	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_09095	SM00903	Flavin reductase like domain
AC20117_09115	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_09150	SM00849	Metallo-beta-lactamase superfamily
AC20117_09165	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_09190	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AC20117_09190	SM01232	AC20117_09190
AC20117_09200	SM00382	ATPases associated with a variety of cellular activities
AC20117_09220	SM00829	Enoylreductase
AC20117_09225	SM00829	Enoylreductase
AC20117_09230	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_09235	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_09250	SM00354	helix_turn _helix lactose operon repressor
AC20117_09275	SM01120	AC20117_09275
AC20117_09300	SM00861	Transketolase, pyrimidine binding domain
AC20117_09305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_09305	SM00895	AC20117_09305
AC20117_09325	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_09365	SM00895	AC20117_09365
AC20117_09365	SM00903	Flavin reductase like domain
AC20117_09395	SM00382	ATPases associated with a variety of cellular activities
AC20117_09410	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_09445	SM00849	Metallo-beta-lactamase superfamily
AC20117_09460	SM00631	AC20117_09460
AC20117_09485	SM00354	helix_turn _helix lactose operon repressor
AC20117_09490	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_09505	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_09530	SM00829	Enoylreductase
AC20117_09585	SM00829	Enoylreductase
AC20117_09645	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_09700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_09700	SM00895	AC20117_09700
AC20117_09705	SM00903	Flavin reductase like domain
AC20117_09715	SM00382	ATPases associated with a variety of cellular activities
AC20117_09715	SM01086	C-terminal, D2-small domain, of ClpB protein
AC20117_09755	SM00862	Transcriptional regulatory protein, C terminal
AC20117_09755	SM01043	Bacterial transcriptional activator domain
AC20117_09775	SM00421	helix_turn_helix, Lux Regulon
AC20117_09775	SM00448	cheY-homologous receiver domain
AC20117_09895	SM00382	ATPases associated with a variety of cellular activities
AC20117_09915	SM00822	AC20117_09915
AC20117_09945	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_10035	SM00506	Appr-1"-p processing enzyme
AC20117_10040	SM00901	AC20117_10040
AC20117_10045	SM00849	Metallo-beta-lactamase superfamily
AC20117_10070	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AC20117_10070	SM01232	AC20117_10070
AC20117_10075	SM00487	DEAD-like helicases superfamily
AC20117_10075	SM00490	helicase superfamily c-terminal domain
AC20117_10100	SM00244	prohibitin homologues
AC20117_10145	SM00862	Transcriptional regulatory protein, C terminal
AC20117_10160	SM00507	HNH nucleases
AC20117_10205	SM00487	DEAD-like helicases superfamily
AC20117_10205	SM00490	helicase superfamily c-terminal domain
AC20117_10240	SM00829	Enoylreductase
AC20117_10280	SM00382	ATPases associated with a variety of cellular activities
AC20117_10305	SM00855	Phosphoglycerate mutase family
AC20117_10315	SM00387	Histidine kinase-like ATPases
AC20117_10315	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_10320	SM00448	cheY-homologous receiver domain
AC20117_10320	SM00862	Transcriptional regulatory protein, C terminal
AC20117_10340	SM01058	CarD-like/TRCF domain
AC20117_10355	SM00840	AC20117_10355
AC20117_10360	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AC20117_10365	SM00642	Alpha-amylase domain
AC20117_10390	SM01236	AC20117_10390
AC20117_10400	SM00704	CDGSH-type zinc finger. Function unknown.
AC20117_10410	SM00642	Alpha-amylase domain
AC20117_10415	SM00642	Alpha-amylase domain
AC20117_10420	SM00642	Alpha-amylase domain
AC20117_10505	SM00382	ATPases associated with a variety of cellular activities
AC20117_10540	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_10545	SM00857	Resolvase, N terminal domain
AC20117_10610	SM00903	Flavin reductase like domain
AC20117_10620	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC20117_10635	SM00354	helix_turn _helix lactose operon repressor
AC20117_10655	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_10700	SM00986	Uracil DNA glycosylase superfamily
AC20117_10700	SM00987	UreE urease accessory protein, C-terminal domain 
AC20117_10715	SM00357	Cold shock protein domain
AC20117_10745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC20117_10745	SM00387	Histidine kinase-like ATPases
AC20117_10745	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_10750	SM00448	cheY-homologous receiver domain
AC20117_10750	SM00862	Transcriptional regulatory protein, C terminal
AC20117_10760	SM00487	DEAD-like helicases superfamily
AC20117_10760	SM00490	helicase superfamily c-terminal domain
AC20117_10775	SM00357	Cold shock protein domain
AC20117_10795	SM00529	Helix-turn-helix diphteria tox regulatory element
AC20117_10815	SM00507	HNH nucleases
AC20117_10830	SM00852	Probable molybdopterin binding domain
AC20117_10855	SM00382	ATPases associated with a variety of cellular activities
AC20117_10890	SM00881	CoA binding domain
AC20117_10895	SM00829	Enoylreductase
AC20117_10935	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_10940	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_10970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_10970	SM00895	AC20117_10970
AC20117_11045	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_11065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_11065	SM00895	AC20117_11065
AC20117_11085	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_11130	SM00450	Rhodanese Homology Domain
AC20117_11130	SM00849	Metallo-beta-lactamase superfamily
AC20117_11190	SM00487	DEAD-like helicases superfamily
AC20117_11190	SM00490	helicase superfamily c-terminal domain
AC20117_11210	SM01006	Siderophore biosynthesis protein domain
AC20117_11240	SM00344	helix_turn_helix ASNC type
AC20117_11285	SM01058	CarD-like/TRCF domain
AC20117_11305	SM00357	Cold shock protein domain
AC20117_11345	SM00507	HNH nucleases
AC20117_11375	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC20117_11375	SM01012	AC20117_11375
AC20117_11405	SM00014	Acid phosphatase homologues
AC20117_11490	SM00421	helix_turn_helix, Lux Regulon
AC20117_11490	SM00448	cheY-homologous receiver domain
AC20117_11505	SM00870	AC20117_11505
AC20117_11525	SM00271	DnaJ molecular chaperone homology domain
AC20117_11535	SM00422	helix_turn_helix, mercury resistance
AC20117_11540	SM00849	Metallo-beta-lactamase superfamily
AC20117_11570	SM00382	ATPases associated with a variety of cellular activities
AC20117_11580	SM00257	Lysin motif
AC20117_11610	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC20117_11610	SM00876	Biotin and Thiamin Synthesis associated domain
AC20117_11615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_11615	SM00895	AC20117_11615
AC20117_11630	SM00100	Cyclic nucleotide-monophosphate binding domain
AC20117_11660	SM00829	Enoylreductase
AC20117_11705	SM00382	ATPases associated with a variety of cellular activities
AC20117_11710	SM00866	AC20117_11710
AC20117_11745	SM01012	AC20117_11745
AC20117_11750	SM00642	Alpha-amylase domain
AC20117_11800	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_11830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_11865	SM00382	ATPases associated with a variety of cellular activities
AC20117_11870	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_11880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_11880	SM00866	AC20117_11880
AC20117_11900	SM00422	helix_turn_helix, mercury resistance
AC20117_11905	SM00829	Enoylreductase
AC20117_11920	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_11965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_11965	SM00895	AC20117_11965
AC20117_12005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12005	SM00895	AC20117_12005
AC20117_12010	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_12025	SM00903	Flavin reductase like domain
AC20117_12035	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_12055	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_12085	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_12120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12120	SM00895	AC20117_12120
AC20117_12140	SM00382	ATPases associated with a variety of cellular activities
AC20117_12155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12155	SM00895	AC20117_12155
AC20117_12170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12170	SM00895	AC20117_12170
AC20117_12175	SM01329	AC20117_12175
AC20117_12210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12255	SM01130	AC20117_12255
AC20117_12295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12295	SM00895	AC20117_12295
AC20117_12360	SM01230	AC20117_12360
AC20117_12365	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_12385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12385	SM00895	AC20117_12385
AC20117_12460	SM00382	ATPases associated with a variety of cellular activities
AC20117_12500	SM00854	Bacterial capsule synthesis protein PGA_cap
AC20117_12530	SM00903	Flavin reductase like domain
AC20117_12540	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_12550	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_12560	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_12575	SM00382	ATPases associated with a variety of cellular activities
AC20117_12590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12590	SM00895	AC20117_12590
AC20117_12615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC20117_12615	SM00387	Histidine kinase-like ATPases
AC20117_12615	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_12620	SM00448	cheY-homologous receiver domain
AC20117_12620	SM00862	Transcriptional regulatory protein, C terminal
AC20117_12630	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC20117_12700	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_12715	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AC20117_12735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12735	SM00895	AC20117_12735
AC20117_12755	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_12755	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC20117_12765	SM00382	ATPases associated with a variety of cellular activities
AC20117_12775	SM00344	helix_turn_helix ASNC type
AC20117_12820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_12875	SM00382	ATPases associated with a variety of cellular activities
AC20117_12920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_12920	SM00895	AC20117_12920
AC20117_12960	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_12970	SM00903	Flavin reductase like domain
AC20117_13010	SM00829	Enoylreductase
AC20117_13020	SM00100	Cyclic nucleotide-monophosphate binding domain
AC20117_13085	SM00507	HNH nucleases
AC20117_13150	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC20117_13210	SM00344	helix_turn_helix ASNC type
AC20117_13220	SM00382	ATPases associated with a variety of cellular activities
AC20117_13260	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_13290	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_13310	SM00855	Phosphoglycerate mutase family
AC20117_13325	SM01060	AC20117_13325
AC20117_13330	SM00507	HNH nucleases
AC20117_13380	SM00382	ATPases associated with a variety of cellular activities
AC20117_13465	SM00798	AICARFT/IMPCHase bienzyme
AC20117_13465	SM00851	MGS-like domain
AC20117_13530	SM00382	ATPases associated with a variety of cellular activities
AC20117_13560	SM00419	helix_turn_helix, cAMP Regulatory protein
AC20117_13595	SM00387	Histidine kinase-like ATPases
AC20117_13600	SM00421	helix_turn_helix, Lux Regulon
AC20117_13600	SM00448	cheY-homologous receiver domain
AC20117_13640	SM00382	ATPases associated with a variety of cellular activities
AC20117_13725	SM00382	ATPases associated with a variety of cellular activities
AC20117_13745	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AC20117_13765	SM01192	AC20117_13765
AC20117_13765	SM01193	AC20117_13765
AC20117_13810	SM00507	HNH nucleases
AC20117_13815	SM00382	ATPases associated with a variety of cellular activities
AC20117_13820	SM00382	ATPases associated with a variety of cellular activities
AC20117_13835	SM00883	Chaperonin 10 Kd subunit
AC20117_13910	SM00670	Large family of predicted nucleotide-binding domains
AC20117_13920	SM00387	Histidine kinase-like ATPases
AC20117_13925	SM00421	helix_turn_helix, Lux Regulon
AC20117_13925	SM00448	cheY-homologous receiver domain
AC20117_13930	SM00862	Transcriptional regulatory protein, C terminal
AC20117_13930	SM01043	Bacterial transcriptional activator domain
AC20117_13965	SM00947	Carbonic anhydrase
AC20117_13995	SM01001	AIR carboxylase
AC20117_14050	SM00996	S-adenosyl-L-homocysteine hydrolase
AC20117_14050	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AC20117_14095	SM00460	Transglutaminase/protease-like homologues
AC20117_14115	SM01208	AC20117_14115
AC20117_14120	SM00650	Ribosomal RNA adenine dimethylases
AC20117_14130	SM00382	ATPases associated with a variety of cellular activities
AC20117_14135	SM00421	helix_turn_helix, Lux Regulon
AC20117_14145	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_14200	SM00421	helix_turn_helix, Lux Regulon
AC20117_14205	SM00421	helix_turn_helix, Lux Regulon
AC20117_14210	SM00382	ATPases associated with a variety of cellular activities
AC20117_14210	SM00421	helix_turn_helix, Lux Regulon
AC20117_14215	SM00382	ATPases associated with a variety of cellular activities
AC20117_14215	SM00421	helix_turn_helix, Lux Regulon
AC20117_14220	SM00984	UDP binding domain
AC20117_14255	SM00507	HNH nucleases
AC20117_14265	SM00862	Transcriptional regulatory protein, C terminal
AC20117_14265	SM01043	Bacterial transcriptional activator domain
AC20117_14300	SM01400	AC20117_14300
AC20117_14370	SM00857	Resolvase, N terminal domain
AC20117_14405	SM00382	ATPases associated with a variety of cellular activities
AC20117_14420	SM00382	ATPases associated with a variety of cellular activities
AC20117_14430	SM00421	helix_turn_helix, Lux Regulon
AC20117_14445	SM00387	Histidine kinase-like ATPases
AC20117_14445	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_14450	SM00448	cheY-homologous receiver domain
AC20117_14450	SM00862	Transcriptional regulatory protein, C terminal
AC20117_14460	SM00903	Flavin reductase like domain
AC20117_14480	SM01012	AC20117_14480
AC20117_14490	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC20117_14490	SM01012	AC20117_14490
AC20117_14495	SM01012	AC20117_14495
AC20117_14505	SM00822	AC20117_14505
AC20117_14570	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_14660	SM00226	Low molecular weight phosphatase family
AC20117_14845	SM00387	Histidine kinase-like ATPases
AC20117_14845	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_14860	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_14865	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_14920	SM00829	Enoylreductase
AC20117_14935	SM00487	DEAD-like helicases superfamily
AC20117_14935	SM00490	helicase superfamily c-terminal domain
AC20117_14935	SM00982	AC20117_14935
AC20117_14935	SM01058	CarD-like/TRCF domain
AC20117_14960	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_14970	SM00382	ATPases associated with a variety of cellular activities
AC20117_14975	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_14995	SM00382	ATPases associated with a variety of cellular activities
AC20117_15005	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_15045	SM00382	ATPases associated with a variety of cellular activities
AC20117_15055	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_15060	SM00344	helix_turn_helix ASNC type
AC20117_15065	SM00903	Flavin reductase like domain
AC20117_15135	SM00387	Histidine kinase-like ATPases
AC20117_15135	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_15155	SM00822	AC20117_15155
AC20117_15175	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_15200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_15200	SM00895	AC20117_15200
AC20117_15210	SM00382	ATPases associated with a variety of cellular activities
AC20117_15215	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_15230	SM00903	Flavin reductase like domain
AC20117_15305	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_15370	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC20117_15370	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_15375	SM01012	AC20117_15375
AC20117_15410	SM00382	ATPases associated with a variety of cellular activities
AC20117_15420	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_15530	SM00354	helix_turn _helix lactose operon repressor
AC20117_15540	SM00822	AC20117_15540
AC20117_15560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_15560	SM00866	AC20117_15560
AC20117_15575	SM00382	ATPases associated with a variety of cellular activities
AC20117_15605	SM00354	helix_turn _helix lactose operon repressor
AC20117_15630	SM01119	AC20117_15630
AC20117_15640	SM00487	DEAD-like helicases superfamily
AC20117_15640	SM00490	helicase superfamily c-terminal domain
AC20117_15645	SM00344	helix_turn_helix ASNC type
AC20117_15665	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_15680	SM00421	helix_turn_helix, Lux Regulon
AC20117_15680	SM00448	cheY-homologous receiver domain
AC20117_15685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC20117_15685	SM00387	Histidine kinase-like ATPases
AC20117_15745	SM00641	Glycosyl hydrolases family 25
AC20117_15760	SM00909	Sporulation and spore germination
AC20117_15815	SM00984	UDP binding domain
AC20117_15840	SM00387	Histidine kinase-like ATPases
AC20117_15840	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_15845	SM00448	cheY-homologous receiver domain
AC20117_15845	SM00862	Transcriptional regulatory protein, C terminal
AC20117_15865	SM01133	AC20117_15865
AC20117_15870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC20117_15870	SM00387	Histidine kinase-like ATPases
AC20117_15870	SM00388	His Kinase A (phosphoacceptor) domain
AC20117_15875	SM00052	Putative diguanylate phosphodiesterase
AC20117_15875	SM00267	diguanylate cyclase
AC20117_15875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC20117_15915	SM00862	Transcriptional regulatory protein, C terminal
AC20117_15950	SM00271	DnaJ molecular chaperone homology domain
AC20117_15970	SM00316	Ribosomal protein S1-like RNA-binding domain
AC20117_15970	SM00732	Likely ribonuclease with RNase H fold.
AC20117_16000	SM00878	Biotin carboxylase C-terminal domain
AC20117_16005	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_16030	SM00093	SERine  Proteinase INhibitors
AC20117_16040	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_16070	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AC20117_16075	SM00060	Fibronectin type 3 domain
AC20117_16085	SM00507	HNH nucleases
AC20117_16090	SM00060	Fibronectin type 3 domain
AC20117_16095	SM00060	Fibronectin type 3 domain
AC20117_16110	SM00460	Transglutaminase/protease-like homologues
AC20117_16115	SM00240	Forkhead associated domain
AC20117_16120	SM00331	Sigma factor PP2C-like phosphatases
AC20117_16120	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AC20117_16130	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_16140	SM00292	breast cancer carboxy-terminal domain
AC20117_16140	SM00532	Ligase N family
AC20117_16170	SM00845	GatB domain
AC20117_16205	SM00862	Transcriptional regulatory protein, C terminal
AC20117_16215	SM00829	Enoylreductase
AC20117_16245	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_16310	SM00363	S4 RNA-binding domain
AC20117_16365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC20117_16370	SM00400	zinc finger
AC20117_16370	SM00493	AC20117_16370
AC20117_16370	SM00766	DNA primase DnaG DnaB-binding
AC20117_16455	SM00448	cheY-homologous receiver domain
AC20117_16455	SM00850	LytTr DNA-binding domain
AC20117_16460	SM00387	Histidine kinase-like ATPases
AC20117_16480	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AC20117_16480	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AC20117_16485	SM00344	helix_turn_helix ASNC type
AC20117_16495	SM00861	Transketolase, pyrimidine binding domain
AC20117_16520	SM00878	Biotin carboxylase C-terminal domain
AC20117_16530	SM00882	Coenzyme A transferase
AC20117_16535	SM00882	Coenzyme A transferase
AC20117_16655	SM00904	Riboflavin kinase
AC20117_16660	SM01387	AC20117_16660
AC20117_16665	SM00316	Ribosomal protein S1-like RNA-binding domain
AC20117_16665	SM00322	K homology RNA-binding domain
AC20117_16685	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC20117_16705	SM00382	ATPases associated with a variety of cellular activities
AC20117_16715	SM00852	Probable molybdopterin binding domain
AC20117_16750	SM01130	AC20117_16750
AC20117_16755	SM00849	Metallo-beta-lactamase superfamily
AC20117_16760	SM00382	ATPases associated with a variety of cellular activities
AC20117_16760	SM00843	AC20117_16760
AC20117_16775	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_16780	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_16790	SM00382	ATPases associated with a variety of cellular activities
AC20117_16800	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC20117_16825	SM00487	DEAD-like helicases superfamily
AC20117_16825	SM00491	AC20117_16825
AC20117_16885	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AC20117_16910	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC20117_16925	SM00873	B3/4 domain
AC20117_16925	SM00874	tRNA synthetase B5 domain
AC20117_16925	SM00896	Ferredoxin-fold anticodon binding domain
AC20117_16940	SM00823	Phosphopantetheine attachment site
AC20117_16945	SM00829	Enoylreductase
AC20117_16950	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC20117_17045	SM00363	S4 RNA-binding domain
AC20117_17095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_17095	SM00895	AC20117_17095
AC20117_17105	SM00448	cheY-homologous receiver domain
AC20117_17110	SM00387	Histidine kinase-like ATPases
AC20117_17135	SM00363	S4 RNA-binding domain
AC20117_17150	SM00382	ATPases associated with a variety of cellular activities
AC20117_17170	SM00240	Forkhead associated domain
AC20117_17175	SM00422	helix_turn_helix, mercury resistance
AC20117_17185	SM00422	helix_turn_helix, mercury resistance
AC20117_17195	SM00878	Biotin carboxylase C-terminal domain
AC20117_17240	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_17240	SM00740	AC20117_17240
AC20117_17245	SM00257	Lysin motif
AC20117_17330	SM00864	Tubulin/FtsZ family, GTPase domain
AC20117_17330	SM00865	Tubulin/FtsZ family, C-terminal domain
AC20117_17370	SM00481	DNA polymerase alpha chain like domain
AC20117_17375	SM00903	Flavin reductase like domain
AC20117_17405	SM01230	AC20117_17405
AC20117_17415	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_17415	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC20117_17420	SM00382	ATPases associated with a variety of cellular activities
AC20117_17430	SM01230	AC20117_17430
AC20117_17445	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC20117_17465	SM00245	tail specific protease
AC20117_17520	SM00387	Histidine kinase-like ATPases
AC20117_17520	SM00433	TopoisomeraseII
AC20117_17545	SM00382	ATPases associated with a variety of cellular activities
AC20117_17560	SM00507	HNH nucleases
AC20117_17565	SM00434	DNA Topoisomerase IV
AC20117_17570	SM00881	CoA binding domain
AC20117_17645	SM00861	Transketolase, pyrimidine binding domain
AC20117_17660	SM00986	Uracil DNA glycosylase superfamily
AC20117_17660	SM00987	UreE urease accessory protein, C-terminal domain 
AC20117_17690	SM00382	ATPases associated with a variety of cellular activities
AC20117_17705	SM00341	Helicase and RNase D C-terminal
AC20117_17705	SM00474	3'-5' exonuclease
AC20117_17755	SM00450	Rhodanese Homology Domain
AC20117_17940	SM00448	cheY-homologous receiver domain
AC20117_17940	SM01012	AC20117_17940
AC20117_17965	SM00855	Phosphoglycerate mutase family
AC20117_17975	SM00327	von Willebrand factor (vWF) type A domain
AC20117_18005	SM00487	DEAD-like helicases superfamily
AC20117_18005	SM00490	helicase superfamily c-terminal domain
AC20117_18005	SM00847	Helicase associated domain (HA2)  Add an annotation
AC20117_18025	SM00838	Elongation factor G C-terminus
AC20117_18025	SM00889	Elongation factor G, domain IV
AC20117_18040	SM01230	AC20117_18040
AC20117_18075	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AC20117_18075	SM00474	3'-5' exonuclease
AC20117_18075	SM00475	5'-3' exonuclease
AC20117_18075	SM00482	DNA polymerase A domain
AC20117_18090	SM00316	Ribosomal protein S1-like RNA-binding domain
AC20117_18115	SM00487	DEAD-like helicases superfamily
AC20117_18115	SM00490	helicase superfamily c-terminal domain
AC20117_18140	SM00487	DEAD-like helicases superfamily
AC20117_18140	SM00490	helicase superfamily c-terminal domain
AC20117_18150	SM00849	Metallo-beta-lactamase superfamily
AC20117_18155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_18170	SM00563	Phosphate acyltransferases
AC20117_18175	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC20117_18175	SM00465	GIY-YIG type nucleases (URI domain)
AC20117_18200	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC20117_18250	SM00861	Transketolase, pyrimidine binding domain
AC20117_18260	SM01130	AC20117_18260
AC20117_18275	SM00382	ATPases associated with a variety of cellular activities
AC20117_18300	SM00382	ATPases associated with a variety of cellular activities
AC20117_18325	SM00382	ATPases associated with a variety of cellular activities
AC20117_18335	SM00382	ATPases associated with a variety of cellular activities
AC20117_18355	SM00822	AC20117_18355
AC20117_18370	SM00382	ATPases associated with a variety of cellular activities
AC20117_18425	SM00460	Transglutaminase/protease-like homologues
AC20117_18465	SM00822	AC20117_18465
AC20117_18515	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AC20117_18535	SM00642	Alpha-amylase domain
AC20117_18540	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC20117_18585	SM00823	Phosphopantetheine attachment site
AC20117_18680	SM00382	ATPases associated with a variety of cellular activities
AC20117_18740	SM00487	DEAD-like helicases superfamily
AC20117_18740	SM00490	helicase superfamily c-terminal domain
AC20117_18740	SM01142	AC20117_18740
AC20117_18760	SM00244	prohibitin homologues
AC20117_18885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_18885	SM00866	AC20117_18885
AC20117_18940	SM00917	LeuA allosteric (dimerisation) domain
AC20117_18960	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC20117_18960	SM01091	Transporter associated domain
AC20117_18975	SM00909	Sporulation and spore germination
AC20117_18985	SM00271	DnaJ molecular chaperone homology domain
AC20117_19005	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC20117_19010	SM00838	Elongation factor G C-terminus
AC20117_19030	SM00849	Metallo-beta-lactamase superfamily
AC20117_19035	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC20117_19085	SM01409	AC20117_19085
AC20117_19090	SM00072	Guanylate kinase homologues.
AC20117_19100	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AC20117_19105	SM00851	MGS-like domain
AC20117_19105	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AC20117_19110	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AC20117_19140	SM00841	Elongation factor P, C-terminal
AC20117_19140	SM01185	AC20117_19140
AC20117_19170	SM00732	Likely ribonuclease with RNase H fold.
AC20117_19175	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC20117_19190	SM00363	S4 RNA-binding domain
AC20117_19190	SM01390	AC20117_19190
AC20117_19200	SM00382	ATPases associated with a variety of cellular activities
AC20117_19240	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC20117_19240	SM00954	Region found in RelA / SpoT proteins
AC20117_19255	SM01323	AC20117_19255
AC20117_19260	SM00382	ATPases associated with a variety of cellular activities
AC20117_19265	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC20117_19295	SM00854	Bacterial capsule synthesis protein PGA_cap
AC20117_19325	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC20117_19330	SM00481	DNA polymerase alpha chain like domain
AC20117_19365	SM00829	Enoylreductase
AC20117_19370	SM00849	Metallo-beta-lactamase superfamily
AC20117_19405	SM00028	Tetratricopeptide repeats
AC20117_19405	SM00421	helix_turn_helix, Lux Regulon
AC20117_19470	SM00857	Resolvase, N terminal domain
AC20117_19540	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AC20117_19565	SM00316	Ribosomal protein S1-like RNA-binding domain
AC20117_19570	SM00756	AC20117_19570
AC20117_19575	SM00562	AC20117_19575
AC20117_19615	SM00382	ATPases associated with a variety of cellular activities
AC20117_19615	SM00994	ClpX C4-type zinc finger
AC20117_19615	SM01086	C-terminal, D2-small domain, of ClpB protein
AC20117_19620	SM00382	ATPases associated with a variety of cellular activities
AC20117_19620	SM00994	ClpX C4-type zinc finger
AC20117_19620	SM01086	C-terminal, D2-small domain, of ClpB protein
AC20117_19650	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AC20117_19650	SM01232	AC20117_19650
AC20117_19695	SM00382	ATPases associated with a variety of cellular activities
AC20117_19730	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC20117_19740	SM00354	helix_turn _helix lactose operon repressor
AC20117_19760	SM00641	Glycosyl hydrolases family 25
AC20117_19840	SM00382	ATPases associated with a variety of cellular activities
AC20117_19860	SM00479	AC20117_19860
AC20117_19890	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC20117_19945	SM01350	AC20117_19945
AC20117_19985	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AC20117_20000	SM00825	Beta-ketoacyl synthase
AC20117_20020	SM00382	ATPases associated with a variety of cellular activities
AC20117_20100	SM00382	ATPases associated with a variety of cellular activities
AC20117_20100	SM00962	SRP54-type protein, GTPase domain
AC20117_20100	SM00963	SRP54-type protein, helical bundle domain
AC20117_20110	SM00938	Nitrogen regulatory protein P-II
AC20117_20130	SM00507	HNH nucleases
AC20117_20135	SM00382	ATPases associated with a variety of cellular activities
AC20117_20135	SM00962	SRP54-type protein, GTPase domain
AC20117_20135	SM00963	SRP54-type protein, helical bundle domain
AC20117_20140	SM00880	AC20117_20140
AC20117_20150	SM00968	SMC proteins Flexible Hinge Domain
AC20117_20180	SM00834	Putative regulatory protein
AC20117_20190	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AC20117_20190	SM01232	AC20117_20190
AC20117_20195	SM00358	Double-stranded RNA binding motif
AC20117_20195	SM00535	Ribonuclease III family
AC20117_20230	SM00487	DEAD-like helicases superfamily
AC20117_20230	SM00490	helicase superfamily c-terminal domain
AC20117_20235	SM01120	AC20117_20235
AC20117_20260	SM00563	Phosphate acyltransferases
AC20117_20280	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_20325	SM00421	helix_turn_helix, Lux Regulon
AC20117_20325	SM00448	cheY-homologous receiver domain
AC20117_20330	SM00387	Histidine kinase-like ATPases
AC20117_20340	SM00849	Metallo-beta-lactamase superfamily
AC20117_20350	SM01329	AC20117_20350
AC20117_20360	SM00421	helix_turn_helix, Lux Regulon
AC20117_20360	SM00448	cheY-homologous receiver domain
AC20117_20365	SM00382	ATPases associated with a variety of cellular activities
AC20117_20390	SM00382	ATPases associated with a variety of cellular activities
AC20117_20455	SM00857	Resolvase, N terminal domain
AC20117_20480	SM00357	Cold shock protein domain
AC20117_20495	SM00894	Excalibur calcium-binding domain
AC20117_20500	SM00894	Excalibur calcium-binding domain
AC20117_20525	SM00422	helix_turn_helix, mercury resistance
AC20117_20540	SM00226	Low molecular weight phosphatase family
AC20117_20545	SM00226	Low molecular weight phosphatase family
AC20117_20555	SM00226	Low molecular weight phosphatase family
AC20117_20560	SM00226	Low molecular weight phosphatase family
AC20117_20560	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_20560	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_20615	SM01043	Bacterial transcriptional activator domain
AC20117_20675	SM00257	Lysin motif
AC20117_20690	SM00857	Resolvase, N terminal domain
AC20117_20810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_20815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC20117_20860	SM00756	AC20117_20860
AC20117_20870	SM01043	Bacterial transcriptional activator domain
AC20117_20880	SM00823	Phosphopantetheine attachment site
AC20117_21055	SM00954	Region found in RelA / SpoT proteins
AC20117_21130	SM00421	helix_turn_helix, Lux Regulon
AC20117_21130	SM00448	cheY-homologous receiver domain
AC20117_21155	SM00382	ATPases associated with a variety of cellular activities
AC20117_21170	SM01043	Bacterial transcriptional activator domain
AC20117_21280	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_21315	SM00382	ATPases associated with a variety of cellular activities
AC20117_21340	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_21345	SM00460	Transglutaminase/protease-like homologues
AC20117_21380	SM00344	helix_turn_helix ASNC type
AC20117_21395	SM00861	Transketolase, pyrimidine binding domain
AC20117_21410	SM00220	Serine/Threonine protein kinases, catalytic domain
AC20117_21425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_21425	SM00895	AC20117_21425
AC20117_21460	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_21480	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_21515	SM00479	AC20117_21515
AC20117_21525	SM00382	ATPases associated with a variety of cellular activities
AC20117_21530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_21585	SM00487	DEAD-like helicases superfamily
AC20117_21605	SM00382	ATPases associated with a variety of cellular activities
AC20117_21640	SM00357	Cold shock protein domain
AC20117_21660	SM00382	ATPases associated with a variety of cellular activities
AC20117_21725	SM00937	AC20117_21725
AC20117_21730	SM00357	Cold shock protein domain
AC20117_21730	SM00382	ATPases associated with a variety of cellular activities
AC20117_21730	SM00959	Rho termination factor, N-terminal domain
AC20117_21755	SM00836	DALR anticodon binding domain
AC20117_21755	SM01016	Arginyl tRNA synthetase N terminal dom
AC20117_21765	SM00342	helix_turn_helix, arabinose operon control protein
AC20117_21780	SM00382	ATPases associated with a variety of cellular activities
AC20117_21795	SM00382	ATPases associated with a variety of cellular activities
AC20117_21795	SM00487	DEAD-like helicases superfamily
AC20117_21795	SM00490	helicase superfamily c-terminal domain
AC20117_21795	SM00847	Helicase associated domain (HA2)  Add an annotation
AC20117_21805	SM00829	Enoylreductase
AC20117_21810	SM00450	Rhodanese Homology Domain
AC20117_21815	SM00849	Metallo-beta-lactamase superfamily
AC20117_21830	SM00382	ATPases associated with a variety of cellular activities
AC20117_21845	SM01091	Transporter associated domain
AC20117_21850	SM01240	AC20117_21850
AC20117_21855	SM00861	Transketolase, pyrimidine binding domain
AC20117_21910	SM00382	ATPases associated with a variety of cellular activities
AC20117_21920	SM00529	Helix-turn-helix diphteria tox regulatory element
AC20117_21920	SM00899	AC20117_21920
AC20117_21940	SM01043	Bacterial transcriptional activator domain
AC20117_21970	SM00382	ATPases associated with a variety of cellular activities
AC20117_21980	SM00937	AC20117_21980
AC20117_22085	SM00354	helix_turn _helix lactose operon repressor
AC20117_22090	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_22145	SM00382	ATPases associated with a variety of cellular activities
AC20117_22155	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_22165	SM00062	Bacterial periplasmic substrate-binding proteins
AC20117_22175	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_22210	SM00382	ATPases associated with a variety of cellular activities
AC20117_22250	SM00903	Flavin reductase like domain
AC20117_22265	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_22285	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC20117_22285	SM01091	Transporter associated domain
AC20117_22300	SM00530	Helix-turn-helix XRE-family like proteins 
AC20117_22335	SM00866	AC20117_22335
AC20117_22345	SM00450	Rhodanese Homology Domain
AC20117_22345	SM00849	Metallo-beta-lactamase superfamily
AC20117_22360	SM00450	Rhodanese Homology Domain
AC20117_22390	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC20117_22390	SM01091	Transporter associated domain
AC20117_22585	SM00354	helix_turn _helix lactose operon repressor
AC20117_22595	SM01400	AC20117_22595
AC20117_22620	SM00903	Flavin reductase like domain
AC20117_22650	SM01329	AC20117_22650
AC20117_22665	SM00382	ATPases associated with a variety of cellular activities
AC20117_22675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_22675	SM00895	AC20117_22675
AC20117_22715	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_22730	SM00382	ATPases associated with a variety of cellular activities
AC20117_22785	SM01007	Class II Aldolase and Adducin N-terminal domain
AC20117_22790	SM00346	helix_turn_helix isocitrate lyase regulation
AC20117_22920	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC20117_22935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC20117_22935	SM00895	AC20117_22935
AC20117_22955	SM00382	ATPases associated with a variety of cellular activities
AC20117_22965	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AC20117_22970	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC20117_22990	SM00870	AC20117_22990
AC20117_23005	SM00829	Enoylreductase
AC20117_23045	SM00903	Flavin reductase like domain
AC20117_23085	SM00903	Flavin reductase like domain
AC20117_23095	SM00344	helix_turn_helix ASNC type
AC20117_23140	SM00857	Resolvase, N terminal domain
AC20117_23170	SM00479	AC20117_23170
AC20117_23170	SM00487	DEAD-like helicases superfamily
AC20117_23170	SM00490	helicase superfamily c-terminal domain
AC20117_23175	SM00354	helix_turn _helix lactose operon repressor
AC20117_23180	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC20117_23245	SM00530	Helix-turn-helix XRE-family like proteins 
