locus-tag	class	description
NMQ03_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NMQ03_00010	COG0592	DNA-directed DNA polymerase activity
NMQ03_00015	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
NMQ03_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NMQ03_00025	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
NMQ03_00030	COG0187	DNA topoisomerase II activity
NMQ03_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NMQ03_00085	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NMQ03_00090	COG2818	Glycosylase
NMQ03_00115	COG0515	serine threonine protein kinase
NMQ03_00120	COG0515	serine threonine protein kinase
NMQ03_00125	COG0768	penicillin binding
NMQ03_00140	COG1716	ATPase activity
NMQ03_00145	COG1716	ATPase activity
NMQ03_00165	COG2130	NADP-dependent
NMQ03_00195	COG0346	lactoylglutathione lyase activity
NMQ03_00245	COG0277	FAD linked oxidase domain protein
NMQ03_00250	COG0154	amidase activity
NMQ03_00255	COG2957	Belongs to the agmatine deiminase family
NMQ03_00265	COG1162	GTPase activity
NMQ03_00275	COG0477	Major facilitator Superfamily
NMQ03_00285	COG3706	GGDEF domain
NMQ03_00305	COG0673	inositol 2-dehydrogenase activity
NMQ03_00315	COG1175	transmembrane transport
NMQ03_00320	COG1653	transport
NMQ03_00330	COG1609	Transcriptional regulator
NMQ03_00335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NMQ03_00340	COG0765	amino acid transport
NMQ03_00345	COG1126	abc transporter atp-binding protein
NMQ03_00350	COG0673	inositol 2-dehydrogenase activity
NMQ03_00360	COG0659	secondary active sulfate transmembrane transporter activity
NMQ03_00395	COG2084	Dehydrogenase
NMQ03_00420	COG1234	tRNA 3'-trailer cleavage
NMQ03_00425	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_00435	COG1414	Transcriptional regulator
NMQ03_00445	COG2124	cytochrome p450
NMQ03_00450	COG0477	Major facilitator Superfamily
NMQ03_00485	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NMQ03_00515	COG1414	Transcriptional regulator
NMQ03_00525	COG0574	Belongs to the PEP-utilizing enzyme family
NMQ03_00525	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMQ03_00570	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NMQ03_00610	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMQ03_00615	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NMQ03_00625	COG0460	homoserine dehydrogenase
NMQ03_00635	COG1609	Transcriptional regulator
NMQ03_00640	COG1957	nucleoside hydrolase
NMQ03_00645	COG0477	Major facilitator Superfamily
NMQ03_00650	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NMQ03_00655	COG1609	Transcriptional regulator
NMQ03_00660	COG0395	ABC-type sugar transport system, permease component
NMQ03_00665	COG1175	transmembrane transport
NMQ03_00680	COG1621	beta-fructofuranosidase activity
NMQ03_00685	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_00755	COG3622	Belongs to the hyi family
NMQ03_00785	COG0673	inositol 2-dehydrogenase activity
NMQ03_00805	COG1940	carbohydrate kinase activity
NMQ03_00820	COG0477	Major facilitator Superfamily
NMQ03_00830	COG0583	DNA-binding transcription factor activity
NMQ03_00835	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_00845	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMQ03_00855	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMQ03_00890	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NMQ03_00905	COG0561	phosphatase activity
NMQ03_00930	COG2199	diguanylate cyclase activity
NMQ03_00930	COG2200	EAL domain
NMQ03_00930	COG2203	Gaf domain
NMQ03_00940	COG5002	protein histidine kinase activity
NMQ03_00955	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_00960	COG1929	Belongs to the glycerate kinase type-1 family
NMQ03_00980	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_00995	COG0823	Involved in the tonB-independent uptake of proteins
NMQ03_01005	COG0673	inositol 2-dehydrogenase activity
NMQ03_01010	COG0673	inositol 2-dehydrogenase activity
NMQ03_01020	COG0395	ABC-type sugar transport system, permease component
NMQ03_01065	COG2233	PERMEase
NMQ03_01070	COG0778	Nitroreductase
NMQ03_01090	COG0583	DNA-binding transcription factor activity
NMQ03_01105	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NMQ03_01110	COG2186	Transcriptional regulator
NMQ03_01130	COG5416	Lipopolysaccharide assembly protein A domain
NMQ03_01145	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NMQ03_01160	COG1597	lipid kinase activity
NMQ03_01165	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NMQ03_01175	COG0561	phosphatase activity
NMQ03_01195	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
NMQ03_01225	COG0037	tRNA processing
NMQ03_01235	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NMQ03_01240	COG0302	gtp cyclohydrolase
NMQ03_01245	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NMQ03_01250	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NMQ03_01280	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
NMQ03_01300	COG0693	protein deglycase activity
NMQ03_01305	COG2814	Major facilitator Superfamily
NMQ03_01315	COG1309	transcriptional regulator
NMQ03_01330	COG3665	Urea carboxylase-associated protein
NMQ03_01350	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NMQ03_01370	COG0823	Involved in the tonB-independent uptake of proteins
NMQ03_01370	COG1506	peptidase
NMQ03_01375	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NMQ03_01380	COG2376	Dihydroxyacetone kinase
NMQ03_01385	COG1461	Dihydroxyacetone kinase
NMQ03_01390	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
NMQ03_01420	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
NMQ03_01435	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NMQ03_01455	COG5002	protein histidine kinase activity
NMQ03_01470	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NMQ03_01485	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NMQ03_01500	COG0306	phosphate transporter
NMQ03_01530	COG1609	Transcriptional regulator
NMQ03_01545	COG1595	DNA-templated transcription, initiation
NMQ03_01570	COG1609	Transcriptional regulator
NMQ03_01575	COG1335	isochorismatase
NMQ03_01580	COG0831	urea catabolic process
NMQ03_01585	COG0832	Belongs to the urease beta subunit family
NMQ03_01590	COG0804	urea catabolic process
NMQ03_01595	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
NMQ03_01600	COG0830	nickel cation binding
NMQ03_01605	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
NMQ03_01610	COG0829	nickel cation binding
NMQ03_01615	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
NMQ03_01660	COG3958	Transketolase
NMQ03_01665	COG3959	Transketolase, thiamine diphosphate binding domain
NMQ03_01670	COG0477	Major facilitator Superfamily
NMQ03_01680	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_01690	COG0698	ribose 5-phosphate isomerase
NMQ03_01705	COG2272	Belongs to the type-B carboxylesterase lipase family
NMQ03_01720	COG4133	protoheme IX ABC transporter activity
NMQ03_01770	COG3250	beta-galactosidase activity
NMQ03_01780	COG3507	Belongs to the glycosyl hydrolase 43 family
NMQ03_01790	COG1414	Transcriptional regulator
NMQ03_01795	COG3408	Glycogen debranching enzyme
NMQ03_01820	COG1175	transmembrane transport
NMQ03_01825	COG0395	ABC-type sugar transport system, permease component
NMQ03_01830	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_01835	COG0800	Aldolase
NMQ03_01845	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_01850	COG2226	methyltransferase
NMQ03_01875	COG1595	DNA-templated transcription, initiation
NMQ03_01895	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_01905	COG1960	acyl-CoA dehydrogenase activity
NMQ03_01915	COG0477	Major facilitator Superfamily
NMQ03_01925	COG1609	Transcriptional regulator
NMQ03_01930	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NMQ03_01935	COG2814	Major facilitator Superfamily
NMQ03_01940	COG0385	Bile acid
NMQ03_01945	COG0243	molybdopterin cofactor binding
NMQ03_01960	COG0657	acetylesterase activity
NMQ03_01965	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMQ03_01970	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMQ03_01990	COG3387	PFAM Glycoside hydrolase 15-related
NMQ03_02000	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMQ03_02005	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_02010	COG1063	alcohol dehydrogenase
NMQ03_02020	COG0697	spore germination
NMQ03_02035	COG0667	Aldo Keto reductase
NMQ03_02060	COG2890	protein-(glutamine-N5) methyltransferase activity
NMQ03_02080	COG0318	PFAM AMP-dependent synthetase and ligase
NMQ03_02085	COG0183	Belongs to the thiolase family
NMQ03_02090	COG1960	acyl-CoA dehydrogenase activity
NMQ03_02095	COG1309	transcriptional regulator
NMQ03_02105	COG0667	Aldo Keto reductase
NMQ03_02110	COG0656	L-ascorbic acid biosynthetic process
NMQ03_02125	COG3360	Dodecin
NMQ03_02130	COG2186	Transcriptional regulator
NMQ03_02140	COG2084	Dehydrogenase
NMQ03_02180	COG0300	oxidoreductase activity
NMQ03_02190	COG0477	Major facilitator Superfamily
NMQ03_02200	COG1793	dna ligase
NMQ03_02200	COG3285	dna ligase
NMQ03_02205	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
NMQ03_02225	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NMQ03_02225	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NMQ03_02225	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NMQ03_02230	COG1105	Belongs to the carbohydrate kinase PfkB family
NMQ03_02250	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NMQ03_02260	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NMQ03_02270	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NMQ03_02275	COG0509	glycine decarboxylation via glycine cleavage system
NMQ03_02285	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NMQ03_02285	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NMQ03_02290	COG1113	amino acid transport
NMQ03_02310	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
NMQ03_02320	COG2733	membrane
NMQ03_02330	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NMQ03_02370	COG4122	O-methyltransferase activity
NMQ03_02425	COG1191	sigma factor activity
NMQ03_02430	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NMQ03_02435	COG0859	PFAM glycosyl transferase family 9
NMQ03_02445	COG0297	glycogen (starch) synthase activity
NMQ03_02450	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NMQ03_02455	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
NMQ03_02455	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
NMQ03_02470	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
NMQ03_02470	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
NMQ03_02490	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_02500	COG1733	regulation of RNA biosynthetic process
NMQ03_02505	COG0702	epimerase
NMQ03_02510	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NMQ03_02515	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NMQ03_02525	COG1414	Transcriptional regulator
NMQ03_02530	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NMQ03_02555	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NMQ03_02575	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMQ03_02580	COG0589	response to stress
NMQ03_02600	COG3290	protein histidine kinase activity
NMQ03_02610	COG0010	Belongs to the arginase family
NMQ03_02620	COG2252	PERMEase
NMQ03_02640	COG0574	Belongs to the PEP-utilizing enzyme family
NMQ03_02640	COG3848	Pyruvate phosphate dikinase
NMQ03_02685	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NMQ03_02685	COG1796	DNA polymerase
NMQ03_02735	COG0366	Alpha amylase catalytic
NMQ03_02760	COG1609	Transcriptional regulator
NMQ03_02775	COG1024	Enoyl-CoA hydratase
NMQ03_02805	COG1278	Cold shock
NMQ03_02810	COG2197	response regulator
NMQ03_02815	COG4585	Histidine kinase
NMQ03_02825	COG0666	response to abiotic stimulus
NMQ03_02840	COG2031	fatty acid transporter
NMQ03_02845	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NMQ03_02865	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NMQ03_02890	COG0357	Ribosomal RNA small subunit methyltransferase G
NMQ03_02890	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NMQ03_02895	COG0191	fructose-bisphosphate aldolase activity
NMQ03_02930	COG1595	DNA-templated transcription, initiation
NMQ03_02940	COG1832	CoA-binding protein
NMQ03_02955	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NMQ03_02960	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NMQ03_02970	COG1116	anion transmembrane transporter activity
NMQ03_02975	COG1832	CoA-binding protein
NMQ03_02985	COG2315	Protein conserved in bacteria
NMQ03_03010	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NMQ03_03015	COG0047	phosphoribosylformylglycinamidine synthase activity
NMQ03_03030	COG1404	Belongs to the peptidase S8 family
NMQ03_03050	COG1846	Transcriptional regulator
NMQ03_03070	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NMQ03_03105	COG0386	Belongs to the glutathione peroxidase family
NMQ03_03110	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
NMQ03_03115	COG0438	transferase activity, transferring glycosyl groups
NMQ03_03135	COG1309	transcriptional regulator
NMQ03_03145	COG0438	transferase activity, transferring glycosyl groups
NMQ03_03160	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NMQ03_03180	COG1476	TRANSCRIPTIONal
NMQ03_03190	COG0642	Histidine kinase
NMQ03_03195	COG0745	RESPONSE REGULATOR receiver
NMQ03_03200	COG0477	Major facilitator Superfamily
NMQ03_03215	COG0028	Belongs to the TPP enzyme family
NMQ03_03220	COG0351	phosphomethylpyrimidine kinase
NMQ03_03235	COG0343	queuine tRNA-ribosyltransferase activity
NMQ03_03265	COG1621	beta-fructofuranosidase activity
NMQ03_03280	COG1960	acyl-CoA dehydrogenase activity
NMQ03_03295	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NMQ03_03305	COG0586	Pfam SNARE associated Golgi protein
NMQ03_03315	COG0564	pseudouridine synthase activity
NMQ03_03335	COG2364	Membrane
NMQ03_03340	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NMQ03_03350	COG0723	plastoquinol--plastocyanin reductase activity
NMQ03_03380	COG0028	Belongs to the TPP enzyme family
NMQ03_03390	COG2066	Belongs to the glutaminase family
NMQ03_03395	COG2508	Transcriptional regulator
NMQ03_03395	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
NMQ03_03405	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMQ03_03420	COG2814	Major facilitator Superfamily
NMQ03_03425	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMQ03_03445	COG1609	Transcriptional regulator
NMQ03_03455	COG1175	transmembrane transport
NMQ03_03460	COG0395	ABC-type sugar transport system, permease component
NMQ03_03470	COG0673	inositol 2-dehydrogenase activity
NMQ03_03480	COG1904	glucuronate isomerase
NMQ03_03485	COG0246	Mannitol dehydrogenase
NMQ03_03490	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_03520	COG1063	alcohol dehydrogenase
NMQ03_03545	COG0438	transferase activity, transferring glycosyl groups
NMQ03_03555	COG0671	phosphoesterase, PA-phosphatase related
NMQ03_03560	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NMQ03_03575	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NMQ03_03590	COG2205	protein histidine kinase activity
NMQ03_03595	COG0745	RESPONSE REGULATOR receiver
NMQ03_03610	COG2062	phosphohistidine phosphatase, SixA
NMQ03_03615	COG0583	DNA-binding transcription factor activity
NMQ03_03625	COG1309	transcriptional regulator
NMQ03_03630	COG1511	domain protein
NMQ03_03650	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
NMQ03_03655	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NMQ03_03655	COG1017	nitric oxide dioxygenase activity
NMQ03_03670	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NMQ03_03675	COG0514	ATP-dependent DNA helicase (RecQ)
NMQ03_03695	COG1505	serine-type exopeptidase activity
NMQ03_03715	COG0604	alcohol dehydrogenase
NMQ03_03715	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_03715	COG3321	synthase
NMQ03_03725	COG0577	efflux transmembrane transporter activity
NMQ03_03725	COG1136	(ABC) transporter
NMQ03_03735	COG1966	Carbon starvation protein
NMQ03_03755	COG0656	L-ascorbic acid biosynthetic process
NMQ03_03775	COG1252	NADH dehydrogenase
NMQ03_03815	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NMQ03_03820	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NMQ03_03840	COG0588	phosphoglycerate mutase activity
NMQ03_03850	COG5002	protein histidine kinase activity
NMQ03_03875	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
NMQ03_03880	COG0215	cysteine-tRNA ligase activity
NMQ03_03905	COG0028	Belongs to the TPP enzyme family
NMQ03_03915	COG0366	Alpha amylase catalytic
NMQ03_03925	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NMQ03_03950	COG1609	Transcriptional regulator
NMQ03_03955	COG0366	Alpha amylase catalytic
NMQ03_03960	COG0277	FAD linked oxidase domain protein
NMQ03_03970	COG3842	ATPase activity
NMQ03_04010	COG4214	carbohydrate transport
NMQ03_04015	COG1129	ABC transporter
NMQ03_04020	COG4213	ABC transporter substrate-binding protein
NMQ03_04035	COG2160	L-arabinose isomerase activity
NMQ03_04040	COG1609	Transcriptional regulator
NMQ03_04065	COG0783	Belongs to the Dps family
NMQ03_04070	COG0477	Major facilitator Superfamily
NMQ03_04080	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NMQ03_04080	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NMQ03_04085	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NMQ03_04095	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
NMQ03_04120	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NMQ03_04135	COG1278	Cold shock
NMQ03_04145	COG0459	protein refolding
NMQ03_04150	COG1653	transport
NMQ03_04155	COG0328	RNA-DNA hybrid ribonuclease activity
NMQ03_04165	COG2205	protein histidine kinase activity
NMQ03_04170	COG0745	RESPONSE REGULATOR receiver
NMQ03_04190	COG1061	Type III restriction enzyme res subunit
NMQ03_04205	COG1278	Cold shock
NMQ03_04225	COG0739	heme binding
NMQ03_04230	COG0791	NLP P60 protein
NMQ03_04230	COG1388	LysM domain
NMQ03_04230	COG3103	Sh3 type 3 domain protein
NMQ03_04245	COG0746	molybdenum cofactor guanylyltransferase activity
NMQ03_04260	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NMQ03_04280	COG0488	(ABC) transporter
NMQ03_04285	COG1132	(ABC) transporter
NMQ03_04290	COG0494	nUDIX hydrolase
NMQ03_04315	COG0483	inositol monophosphate 1-phosphatase activity
NMQ03_04330	COG0045	succinate-CoA ligase (ADP-forming) activity
NMQ03_04350	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_04360	COG1082	Xylose isomerase domain protein TIM barrel
NMQ03_04365	COG2376	Dihydroxyacetone kinase
NMQ03_04370	COG0698	ribose 5-phosphate isomerase
NMQ03_04375	COG1250	3-hydroxyacyl-CoA dehydrogenase
NMQ03_04380	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_04390	COG0149	triose-phosphate isomerase activity
NMQ03_04400	COG0640	Transcriptional regulator
NMQ03_04420	COG3962	Belongs to the TPP enzyme family
NMQ03_04435	COG0673	inositol 2-dehydrogenase activity
NMQ03_04440	COG1082	Xylose isomerase domain protein TIM barrel
NMQ03_04445	COG2814	Major facilitator Superfamily
NMQ03_04455	COG1172	Belongs to the binding-protein-dependent transport system permease family
NMQ03_04470	COG0673	inositol 2-dehydrogenase activity
NMQ03_04480	COG0673	inositol 2-dehydrogenase activity
NMQ03_04490	COG2814	Major facilitator Superfamily
NMQ03_04495	COG3718	enzyme involved in inositol metabolism
NMQ03_04500	COG2188	Transcriptional regulator
NMQ03_04525	COG1396	sequence-specific DNA binding
NMQ03_04540	COG0028	Belongs to the TPP enzyme family
NMQ03_04550	COG0477	Major facilitator Superfamily
NMQ03_04575	COG1401	restriction endodeoxyribonuclease activity
NMQ03_04585	COG5002	protein histidine kinase activity
NMQ03_04590	COG0745	RESPONSE REGULATOR receiver
NMQ03_04600	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NMQ03_04600	COG4124	Belongs to the glycosyl hydrolase 26 family
NMQ03_04630	COG1902	pentaerythritol trinitrate reductase activity
NMQ03_04670	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NMQ03_04685	COG3583	domain protein
NMQ03_04690	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NMQ03_04695	COG0366	Alpha amylase catalytic
NMQ03_04695	COG3103	Sh3 type 3 domain protein
NMQ03_04700	COG1254	Belongs to the acylphosphatase family
NMQ03_04720	COG0667	Aldo Keto reductase
NMQ03_04725	COG1063	alcohol dehydrogenase
NMQ03_04740	COG0477	Major facilitator Superfamily
NMQ03_04745	COG0412	Dienelactone hydrolase
NMQ03_04755	COG1253	flavin adenine dinucleotide binding
NMQ03_04760	COG0640	Transcriptional regulator
NMQ03_04810	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_04815	COG0395	ABC-type sugar transport system, permease component
NMQ03_04820	COG1175	transmembrane transport
NMQ03_04830	COG3684	Belongs to the aldolase LacD family
NMQ03_04840	COG0673	inositol 2-dehydrogenase activity
NMQ03_04880	COG0477	Major facilitator Superfamily
NMQ03_04885	COG1846	Transcriptional regulator
NMQ03_04930	COG2226	methyltransferase
NMQ03_04940	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
NMQ03_04945	COG1984	allophanate hydrolase subunit 2
NMQ03_04950	COG4770	biotin carboxylase activity
NMQ03_04995	COG0277	FAD linked oxidase domain protein
NMQ03_05000	COG2186	Transcriptional regulator
NMQ03_05005	COG1620	l-lactate permease
NMQ03_05010	COG0247	lactate metabolic process
NMQ03_05015	COG1139	Iron-sulfur cluster binding protein
NMQ03_05020	COG1556	Lactate utilization protein
NMQ03_05145	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NMQ03_05190	COG0574	Belongs to the PEP-utilizing enzyme family
NMQ03_05190	COG3848	Pyruvate phosphate dikinase
NMQ03_05210	COG1984	allophanate hydrolase subunit 2
NMQ03_05215	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
NMQ03_05220	COG0439	Biotin carboxylase
NMQ03_05225	COG0511	ligase activity, forming carbon-carbon bonds
NMQ03_05235	COG2508	Transcriptional regulator
NMQ03_05245	COG0252	asparaginase activity
NMQ03_05260	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_05265	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_05295	COG3853	Toxic anion resistance protein (TelA)
NMQ03_05315	COG2304	oxidoreductase activity
NMQ03_05335	COG0028	Belongs to the TPP enzyme family
NMQ03_05345	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NMQ03_05350	COG1113	amino acid transport
NMQ03_05365	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NMQ03_05375	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NMQ03_05380	COG0531	amino acid
NMQ03_05385	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NMQ03_05470	COG3284	Transcriptional regulator
NMQ03_05485	COG1609	Transcriptional regulator
NMQ03_05505	COG1172	Belongs to the binding-protein-dependent transport system permease family
NMQ03_05510	COG0673	inositol 2-dehydrogenase activity
NMQ03_05535	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NMQ03_05545	COG0154	amidase activity
NMQ03_05570	COG1349	DNA-binding transcription factor activity
NMQ03_05575	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NMQ03_05580	COG3395	kinase activity
NMQ03_05595	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
NMQ03_05600	COG2814	Major facilitator Superfamily
NMQ03_05645	COG2072	flavoprotein involved in K transport
NMQ03_05650	COG1063	alcohol dehydrogenase
NMQ03_05670	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NMQ03_05745	COG1278	Cold shock
NMQ03_05760	COG3265	gluconokinase activity
NMQ03_05765	COG2610	gluconate transmembrane transporter activity
NMQ03_05790	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NMQ03_05805	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NMQ03_05810	COG0833	amino acid
NMQ03_05820	COG1414	Transcriptional regulator
NMQ03_05825	COG2040	homocysteine
NMQ03_05835	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NMQ03_05845	COG3300	MHYT domain
NMQ03_05845	COG5001	Diguanylate cyclase
NMQ03_05855	COG0561	phosphatase activity
NMQ03_05860	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NMQ03_05865	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NMQ03_05865	COG0438	transferase activity, transferring glycosyl groups
NMQ03_05870	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
NMQ03_05890	COG0477	Major facilitator Superfamily
NMQ03_05895	COG0138	bifunctional purine biosynthesis protein purh
NMQ03_05910	COG2838	Isocitrate dehydrogenase
NMQ03_05920	COG0515	serine threonine protein kinase
NMQ03_05940	COG0577	efflux transmembrane transporter activity
NMQ03_05940	COG1136	(ABC) transporter
NMQ03_05955	COG4213	ABC transporter substrate-binding protein
NMQ03_05985	COG0531	amino acid
NMQ03_06005	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NMQ03_06010	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NMQ03_06015	COG4585	Histidine kinase
NMQ03_06020	COG2197	response regulator
NMQ03_06035	COG0708	Exodeoxyribonuclease III
NMQ03_06040	COG0180	Tryptophanyl-tRNA synthetase
NMQ03_06060	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NMQ03_06075	COG2009	succinate dehydrogenase
NMQ03_06085	COG1473	amidohydrolase
NMQ03_06085	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
NMQ03_06090	COG1846	Transcriptional regulator
NMQ03_06095	COG1764	response to oxidative stress
NMQ03_06100	COG2130	NADP-dependent
NMQ03_06105	COG1744	ABC transporter substrate-binding protein PnrA-like
NMQ03_06110	COG3845	ABC transporter
NMQ03_06120	COG1079	Belongs to the binding-protein-dependent transport system permease family
NMQ03_06135	COG0586	Pfam SNARE associated Golgi protein
NMQ03_06140	COG0586	Pfam SNARE associated Golgi protein
NMQ03_06145	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NMQ03_06150	COG3956	TIGRFAM MazG family protein
NMQ03_06155	COG0148	phosphopyruvate hydratase activity
NMQ03_06180	COG1252	NADH dehydrogenase
NMQ03_06220	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NMQ03_06250	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NMQ03_06260	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NMQ03_06275	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NMQ03_06280	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NMQ03_06315	COG0114	fumarate hydratase activity
NMQ03_06320	COG0288	reversible hydration of carbon dioxide
NMQ03_06330	COG1494	fructose-1,6-bisphosphatase
NMQ03_06340	COG1482	cell wall glycoprotein biosynthetic process
NMQ03_06345	COG1316	TRANSCRIPTIONal
NMQ03_06355	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NMQ03_06400	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
NMQ03_06455	COG0714	Associated with various cellular activities
NMQ03_06460	COG0084	hydrolase, TatD family'
NMQ03_06465	COG3583	domain protein
NMQ03_06470	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NMQ03_06475	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NMQ03_06480	COG0488	(ABC) transporter
NMQ03_06485	COG1309	transcriptional regulator
NMQ03_06495	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NMQ03_06505	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NMQ03_06510	COG0193	aminoacyl-tRNA hydrolase activity
NMQ03_06530	COG0822	iron-sulfur transferase activity
NMQ03_06545	COG0702	epimerase
NMQ03_06565	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NMQ03_06570	COG0446	pyridine nucleotide-disulphide oxidoreductase
NMQ03_06585	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NMQ03_06595	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NMQ03_06610	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NMQ03_06645	COG0243	molybdopterin cofactor binding
NMQ03_06650	COG2223	nitrite transmembrane transporter activity
NMQ03_06655	COG0477	Major facilitator Superfamily
NMQ03_06675	COG0424	maF-like protein
NMQ03_06680	COG2409	Drug exporters of the RND superfamily
NMQ03_06695	COG1823	symporter activity
NMQ03_06700	COG0671	phosphoesterase, PA-phosphatase related
NMQ03_06715	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NMQ03_06720	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_06725	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
NMQ03_06725	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
NMQ03_06750	COG0714	Associated with various cellular activities
NMQ03_06775	COG0631	protein serine/threonine phosphatase activity
NMQ03_06800	COG1674	ftsk spoiiie
NMQ03_06815	COG0483	inositol monophosphate 1-phosphatase activity
NMQ03_06825	COG0251	oxidation-reduction process
NMQ03_06830	COG4565	transcriptional regulatory protein
NMQ03_06840	COG2851	Citrate transporter
NMQ03_06845	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NMQ03_06850	COG0154	amidase activity
NMQ03_06855	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NMQ03_06870	COG1063	alcohol dehydrogenase
NMQ03_06875	COG0156	8-amino-7-oxononanoate synthase activity
NMQ03_06885	COG1228	amidohydrolase
NMQ03_06910	COG2873	o-acetylhomoserine
NMQ03_06915	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NMQ03_06955	COG0400	carboxylic ester hydrolase activity
NMQ03_06970	COG0423	glycine-tRNA ligase activity
NMQ03_06985	COG2267	carboxylic ester hydrolase activity
NMQ03_07035	COG0358	DNA primase activity
NMQ03_07060	COG2814	Major facilitator Superfamily
NMQ03_07100	COG0052	Belongs to the universal ribosomal protein uS2 family
NMQ03_07105	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NMQ03_07110	COG0528	UMP kinase activity
NMQ03_07115	COG0233	cytoplasmic translational termination
NMQ03_07135	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NMQ03_07145	COG3279	Response regulator of the LytR AlgR family
NMQ03_07150	COG3275	phosphorelay sensor kinase activity
NMQ03_07160	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NMQ03_07180	COG1522	sequence-specific DNA binding
NMQ03_07190	COG0022	dehydrogenase e1 component
NMQ03_07195	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMQ03_07205	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NMQ03_07215	COG1960	acyl-CoA dehydrogenase activity
NMQ03_07250	COG0750	zinc metalloprotease
NMQ03_07270	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NMQ03_07285	COG0442	prolyl-tRNA aminoacylation
NMQ03_07300	COG3570	aminoglycoside hydroxyurea antibiotic resistance kinase
NMQ03_07315	COG0779	Required for maturation of 30S ribosomal subunits
NMQ03_07320	COG0195	Participates in both transcription termination and antitermination
NMQ03_07330	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NMQ03_07335	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NMQ03_07345	COG0590	tRNA wobble adenosine to inosine editing
NMQ03_07355	COG0436	Aminotransferase
NMQ03_07360	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NMQ03_07380	COG3483	tryptophan 2,3-dioxygenase activity
NMQ03_07390	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NMQ03_07395	COG1185	polyribonucleotide nucleotidyltransferase activity
NMQ03_07400	COG0612	Peptidase, M16
NMQ03_07440	COG0521	Mo-molybdopterin cofactor biosynthetic process
NMQ03_07450	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
NMQ03_07480	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NMQ03_07485	COG1674	ftsk spoiiie
NMQ03_07500	COG1396	sequence-specific DNA binding
NMQ03_07515	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NMQ03_07525	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NMQ03_07530	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NMQ03_07535	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NMQ03_07540	COG2813	Specifically methylates the guanine in position
NMQ03_07545	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NMQ03_07555	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NMQ03_07565	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NMQ03_07570	COG0131	Imidazoleglycerol-phosphate dehydratase
NMQ03_07575	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NMQ03_07585	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
NMQ03_07605	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NMQ03_07610	COG0291	Belongs to the bacterial ribosomal protein bL35 family
NMQ03_07615	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NMQ03_07630	COG2814	Major facilitator Superfamily
NMQ03_07635	COG0494	nUDIX hydrolase
NMQ03_07655	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NMQ03_07660	COG0072	phenylalanine-tRNA ligase activity
NMQ03_07660	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NMQ03_07670	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NMQ03_07675	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NMQ03_07680	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NMQ03_07685	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NMQ03_07690	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NMQ03_07695	COG1438	arginine binding
NMQ03_07700	COG0137	argininosuccinate synthase activity
NMQ03_07705	COG0165	Argininosuccinate lyase
NMQ03_07710	COG0259	pyridoxamine-phosphate oxidase activity
NMQ03_07740	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NMQ03_07765	COG0647	UMP catabolic process
NMQ03_07775	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NMQ03_07780	COG0497	DNA recombination
NMQ03_07785	COG0504	CTP synthase activity
NMQ03_07790	COG0494	nUDIX hydrolase
NMQ03_07820	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
NMQ03_07825	COG2079	MmgE PrpD family protein
NMQ03_07845	COG3290	protein histidine kinase activity
NMQ03_07860	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NMQ03_07865	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NMQ03_07880	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
NMQ03_07890	COG1160	GTP binding
NMQ03_07900	COG4974	Belongs to the 'phage' integrase family
NMQ03_07975	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NMQ03_07980	COG0509	glycine decarboxylation via glycine cleavage system
NMQ03_07985	COG1716	ATPase activity
NMQ03_08010	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
NMQ03_08050	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
NMQ03_08060	COG1388	LysM domain
NMQ03_08060	COG3942	CHAP domain
NMQ03_08080	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NMQ03_08090	COG2001	Belongs to the MraZ family
NMQ03_08095	COG0275	rRNA processing
NMQ03_08105	COG0768	penicillin binding
NMQ03_08110	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NMQ03_08120	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NMQ03_08125	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NMQ03_08130	COG0772	Belongs to the SEDS family
NMQ03_08135	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NMQ03_08150	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NMQ03_08155	COG1496	oxidoreductase activity
NMQ03_08160	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NMQ03_08165	COG1799	cell septum assembly
NMQ03_08175	COG3599	regulation of cell shape
NMQ03_08190	COG0587	DNA-directed DNA polymerase activity
NMQ03_08205	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NMQ03_08210	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NMQ03_08230	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
NMQ03_08235	COG0174	glutamine synthetase
NMQ03_08240	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NMQ03_08280	COG0321	lipoyl(octanoyl) transferase activity
NMQ03_08290	COG1090	epimerase
NMQ03_08295	COG4946	Tricorn protease homolog
NMQ03_08295	COG0793	Belongs to the peptidase S41A family
NMQ03_08300	COG1764	response to oxidative stress
NMQ03_08310	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMQ03_08315	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NMQ03_08320	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NMQ03_08340	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NMQ03_08365	COG1271	oxidase subunit
NMQ03_08370	COG1294	oxidase, subunit
NMQ03_08385	COG1131	(ABC) transporter
NMQ03_08390	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
NMQ03_08395	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NMQ03_08400	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NMQ03_08400	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NMQ03_08415	COG1435	thymidine kinase activity
NMQ03_08440	COG0756	dUTP diphosphatase activity
NMQ03_08465	COG0569	domain protein
NMQ03_08470	COG0531	amino acid
NMQ03_08480	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NMQ03_08485	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NMQ03_08500	COG0667	Aldo Keto reductase
NMQ03_08525	COG1250	3-hydroxyacyl-CoA dehydrogenase
NMQ03_08525	COG1024	Enoyl-CoA hydratase
NMQ03_08530	COG0183	Belongs to the thiolase family
NMQ03_08535	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
NMQ03_08560	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NMQ03_08580	COG0300	oxidoreductase activity
NMQ03_08585	COG2132	Multicopper oxidase
NMQ03_08590	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NMQ03_08655	COG0242	peptide deformylase activity
NMQ03_08660	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NMQ03_08670	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NMQ03_08685	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NMQ03_08685	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NMQ03_08695	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
NMQ03_08700	COG0140	phosphoribosyl-ATP diphosphatase activity
NMQ03_08710	COG0107	imidazoleglycerol-phosphate synthase activity
NMQ03_08720	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NMQ03_08740	COG0134	indole-3-glycerol-phosphate synthase activity
NMQ03_08745	COG0133	tryptophan synthase activity
NMQ03_08750	COG0159	tryptophan synthase activity
NMQ03_08755	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NMQ03_08760	COG0070	glutamate synthase
NMQ03_08760	COG0067	glutamate synthase
NMQ03_08760	COG0069	glutamate synthase activity
NMQ03_08770	COG0469	pyruvate kinase activity
NMQ03_08880	COG3593	DNA synthesis involved in DNA repair
NMQ03_08945	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NMQ03_08970	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NMQ03_08980	COG0183	Belongs to the thiolase family
NMQ03_08990	COG0583	DNA-binding transcription factor activity
NMQ03_08995	COG1063	alcohol dehydrogenase
NMQ03_09005	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_09045	COG0601	transmembrane transport
NMQ03_09055	COG0444	Belongs to the ABC transporter superfamily
NMQ03_09110	COG0563	adenylate kinase activity
NMQ03_09120	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMQ03_09150	COG2814	Major facilitator Superfamily
NMQ03_09165	COG1309	transcriptional regulator
NMQ03_09190	COG1063	alcohol dehydrogenase
NMQ03_09195	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_09205	COG3284	Transcriptional regulator
NMQ03_09210	COG0583	DNA-binding transcription factor activity
NMQ03_09215	COG1250	3-hydroxyacyl-CoA dehydrogenase
NMQ03_09220	COG1024	Enoyl-CoA hydratase
NMQ03_09230	COG1960	acyl-CoA dehydrogenase activity
NMQ03_09240	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_09250	COG0477	Major facilitator Superfamily
NMQ03_09255	COG0477	Major facilitator Superfamily
NMQ03_09270	COG1309	transcriptional regulator
NMQ03_09295	COG3619	membrane
NMQ03_09330	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NMQ03_09340	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMQ03_09350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMQ03_09360	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NMQ03_09365	COG2011	ABC-type metal ion transport system permease component
NMQ03_09370	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMQ03_09375	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NMQ03_09395	COG0477	Major facilitator Superfamily
NMQ03_09400	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMQ03_09410	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NMQ03_09415	COG4172	Belongs to the ABC transporter superfamily
NMQ03_09425	COG0601	transmembrane transport
NMQ03_09430	COG0747	negative chemotaxis
NMQ03_09435	COG0277	FAD linked oxidase domain protein
NMQ03_09470	COG3654	unkown
NMQ03_09535	COG1940	carbohydrate kinase activity
NMQ03_09585	COG2186	Transcriptional regulator
NMQ03_09590	COG1850	ribulose-bisphosphate carboxylase activity
NMQ03_09600	COG1063	alcohol dehydrogenase
NMQ03_09620	COG2271	Major facilitator Superfamily
NMQ03_09625	COG2272	Belongs to the type-B carboxylesterase lipase family
NMQ03_09650	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_09655	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NMQ03_09675	COG1309	transcriptional regulator
NMQ03_09680	COG2365	Tyrosine phosphatase family
NMQ03_09695	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NMQ03_09705	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMQ03_09720	COG0473	3-isopropylmalate dehydrogenase activity
NMQ03_09725	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMQ03_09730	COG1301	dicarboxylic acid transport
NMQ03_09735	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_09740	COG1802	Transcriptional regulator
NMQ03_09795	COG0436	Aminotransferase
NMQ03_09800	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NMQ03_09810	COG0583	DNA-binding transcription factor activity
NMQ03_09815	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
NMQ03_09820	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
NMQ03_09825	COG1984	allophanate hydrolase subunit 2
NMQ03_09830	COG4221	oxidoreductase activity
NMQ03_09835	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NMQ03_09840	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_09845	COG1063	alcohol dehydrogenase
NMQ03_09850	COG3265	gluconokinase activity
NMQ03_09870	COG0596	Alpha beta hydrolase
NMQ03_09880	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NMQ03_09895	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMQ03_09895	COG0596	Alpha beta hydrolase
NMQ03_09910	COG1309	transcriptional regulator
NMQ03_09915	COG1250	3-hydroxyacyl-CoA dehydrogenase
NMQ03_09920	COG4221	oxidoreductase activity
NMQ03_09930	COG2249	NAD(P)H dehydrogenase (quinone) activity
NMQ03_09980	COG1268	BioY protein
NMQ03_09995	COG2154	pterin-4-alpha-carbinolamine dehydratase
NMQ03_10015	COG2197	response regulator
NMQ03_10035	COG1063	alcohol dehydrogenase
NMQ03_10040	COG0583	DNA-binding transcription factor activity
NMQ03_10070	COG3387	PFAM Glycoside hydrolase 15-related
NMQ03_10075	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_10080	COG0028	Belongs to the TPP enzyme family
NMQ03_10085	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
NMQ03_10105	COG2017	converts alpha-aldose to the beta-anomer
NMQ03_10110	COG1063	alcohol dehydrogenase
NMQ03_10125	COG0437	4 iron, 4 sulfur cluster binding
NMQ03_10135	COG0709	Synthesizes selenophosphate from selenide and ATP
NMQ03_10165	COG2124	cytochrome p450
NMQ03_10195	COG0667	Aldo Keto reductase
NMQ03_10205	COG2268	Band 7 protein
NMQ03_10210	COG0477	Major facilitator Superfamily
NMQ03_10215	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NMQ03_10220	COG1024	Enoyl-CoA hydratase
NMQ03_10220	COG1250	3-hydroxyacyl-CoA dehydrogenase
NMQ03_10240	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NMQ03_10255	COG0406	alpha-ribazole phosphatase activity
NMQ03_10260	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
NMQ03_10280	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NMQ03_10285	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NMQ03_10300	COG1643	Atp-dependent helicase
NMQ03_10315	COG0009	L-threonylcarbamoyladenylate synthase
NMQ03_10360	COG2050	protein possibly involved in aromatic compounds catabolism
NMQ03_10370	COG4552	Acetyltransferase involved in intracellular survival and related
NMQ03_10375	COG0539	negative regulation of cytoplasmic translation
NMQ03_10385	COG1739	Uncharacterized protein family UPF0029
NMQ03_10395	COG0237	dephospho-CoA kinase activity
NMQ03_10395	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NMQ03_10400	COG0556	nucleotide-excision repair
NMQ03_10425	COG4106	trans-aconitate 2-methyltransferase activity
NMQ03_10455	COG0318	PFAM AMP-dependent synthetase and ligase
NMQ03_10455	COG0204	Acyl-transferase
NMQ03_10460	COG0322	excinuclease ABC activity
NMQ03_10465	COG1660	Displays ATPase and GTPase activities
NMQ03_10470	COG0391	Required for morphogenesis under gluconeogenic growth conditions
NMQ03_10475	COG1481	regulation of sporulation
NMQ03_10480	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NMQ03_10485	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NMQ03_10490	COG0126	phosphoglycerate kinase activity
NMQ03_10495	COG0149	triose-phosphate isomerase activity
NMQ03_10500	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NMQ03_10510	COG0363	glucosamine-6-phosphate deaminase activity
NMQ03_10525	COG0166	Belongs to the GPI family
NMQ03_10530	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NMQ03_10545	COG0109	protoheme IX farnesyltransferase activity
NMQ03_10555	COG0659	secondary active sulfate transmembrane transporter activity
NMQ03_10560	COG1612	heme a metabolic process
NMQ03_10570	COG1131	(ABC) transporter
NMQ03_10595	COG0396	ATPase activity
NMQ03_10600	COG2151	metal-sulfur cluster biosynthetic enzyme
NMQ03_10610	COG0318	PFAM AMP-dependent synthetase and ligase
NMQ03_10625	COG1122	ATPase activity
NMQ03_10630	COG1268	BioY protein
NMQ03_10650	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NMQ03_10665	COG2354	Protein conserved in bacteria
NMQ03_10675	COG0488	(ABC) transporter
NMQ03_10700	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_10705	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_10710	COG0560	Phosphoserine phosphatase
NMQ03_10710	COG3830	Belongs to the UPF0237 family
NMQ03_10715	COG1119	ATPase activity
NMQ03_10730	COG0254	rRNA binding
NMQ03_10760	COG1305	Transglutaminase-like
NMQ03_10775	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NMQ03_10780	COG0297	glycogen (starch) synthase activity
NMQ03_10800	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_10820	COG0435	Glutathione S-transferase
NMQ03_10840	COG0859	PFAM glycosyl transferase family 9
NMQ03_10920	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NMQ03_10940	COG0667	Aldo Keto reductase
NMQ03_10945	COG1968	undecaprenyl-diphosphatase activity
NMQ03_10950	COG0215	cysteine-tRNA ligase activity
NMQ03_10960	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NMQ03_10965	COG0517	IMP dehydrogenase activity
NMQ03_10965	COG1994	Peptidase M50
NMQ03_10975	COG1222	aaa ATPase
NMQ03_10980	COG4122	O-methyltransferase activity
NMQ03_10990	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
NMQ03_10995	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
NMQ03_11000	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
NMQ03_11025	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NMQ03_11030	COG0805	protein transport
NMQ03_11035	COG4581	dead DEAH box helicase
NMQ03_11040	COG1574	metal-dependent hydrolase with the TIM-barrel fold
NMQ03_11045	COG1216	Glycosyl transferase, family 2
NMQ03_11070	COG0242	peptide deformylase activity
NMQ03_11080	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMQ03_11115	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NMQ03_11120	COG1845	cytochrome c oxidase, subunit III
NMQ03_11125	COG2010	Cytochrome c
NMQ03_11130	COG0723	plastoquinol--plastocyanin reductase activity
NMQ03_11135	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NMQ03_11155	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NMQ03_11160	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NMQ03_11180	COG0167	dihydroorotate dehydrogenase activity
NMQ03_11190	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NMQ03_11195	COG1381	Involved in DNA repair and RecF pathway recombination
NMQ03_11200	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NMQ03_11205	COG3590	peptidase
NMQ03_11210	COG1316	TRANSCRIPTIONal
NMQ03_11215	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NMQ03_11225	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NMQ03_11240	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NMQ03_11245	COG0484	heat shock protein binding
NMQ03_11250	COG1420	regulation of RNA biosynthetic process
NMQ03_11270	COG0481	GTPase activity
NMQ03_11280	COG0268	Binds directly to 16S ribosomal RNA
NMQ03_11295	COG1555	photosystem II stabilization
NMQ03_11330	COG1307	EDD domain protein, DegV family
NMQ03_11335	COG0495	leucyl-tRNA aminoacylation
NMQ03_11340	COG0723	plastoquinol--plastocyanin reductase activity
NMQ03_11345	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NMQ03_11350	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NMQ03_11355	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
NMQ03_11360	COG2390	Transcriptional regulator
NMQ03_11365	COG0656	L-ascorbic acid biosynthetic process
NMQ03_11375	COG0438	transferase activity, transferring glycosyl groups
NMQ03_11385	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NMQ03_11395	COG1758	RNA polymerase activity
NMQ03_11400	COG0194	GDP metabolic process
NMQ03_11405	COG0194	GDP metabolic process
NMQ03_11410	COG0284	orotidine-5'-phosphate decarboxylase activity
NMQ03_11420	COG0505	Belongs to the CarA family
NMQ03_11430	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NMQ03_11435	COG0540	Belongs to the ATCase OTCase family
NMQ03_11440	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NMQ03_11450	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NMQ03_11455	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NMQ03_11465	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NMQ03_11470	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NMQ03_11480	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NMQ03_11495	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NMQ03_11510	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NMQ03_11535	COG1053	succinate dehydrogenase
NMQ03_11555	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NMQ03_11570	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NMQ03_11575	COG1196	nuclear chromosome segregation
NMQ03_11580	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NMQ03_11585	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NMQ03_11590	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NMQ03_11600	COG2255	four-way junction helicase activity
NMQ03_11605	COG2255	four-way junction helicase activity
NMQ03_11610	COG0632	four-way junction helicase activity
NMQ03_11615	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NMQ03_11620	COG0217	transcriptional regulatory protein
NMQ03_11625	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
NMQ03_11630	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NMQ03_11640	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NMQ03_11650	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
NMQ03_11655	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NMQ03_11665	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NMQ03_11670	COG0587	DNA-directed DNA polymerase activity
NMQ03_11685	COG0077	Prephenate dehydratase
NMQ03_11685	COG1605	Chorismate mutase
NMQ03_11695	COG2135	peptidase activity
NMQ03_11715	COG1695	Transcriptional regulator
NMQ03_11745	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_11775	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
NMQ03_11780	COG1234	tRNA 3'-trailer cleavage
NMQ03_11800	COG0589	response to stress
NMQ03_11865	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NMQ03_11875	COG0574	Belongs to the PEP-utilizing enzyme family
NMQ03_11875	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMQ03_11880	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NMQ03_11890	COG2217	Heavy metal translocating P-type atpase
NMQ03_11955	COG0463	Glycosyl transferase, family 2
NMQ03_11985	COG1842	Phage shock protein A
NMQ03_12045	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
NMQ03_12070	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NMQ03_12075	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NMQ03_12080	COG1780	Probably involved in ribonucleotide reductase function
NMQ03_12095	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NMQ03_12110	COG0583	DNA-binding transcription factor activity
NMQ03_12125	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NMQ03_12160	COG0714	Associated with various cellular activities
NMQ03_12175	COG1175	transmembrane transport
NMQ03_12190	COG2813	Specifically methylates the guanine in position
NMQ03_12195	COG0492	ferredoxin-NADP+ reductase activity
NMQ03_12225	COG0799	negative regulation of ribosome biogenesis
NMQ03_12235	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NMQ03_12245	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NMQ03_12250	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NMQ03_12255	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NMQ03_12260	COG0211	Belongs to the bacterial ribosomal protein bL27 family
NMQ03_12265	COG0261	This protein binds to 23S rRNA in the presence of protein L20
NMQ03_12270	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NMQ03_12270	COG0352	thiamine-phosphate diphosphorylase activity
NMQ03_12270	COG0351	phosphomethylpyrimidine kinase
NMQ03_12275	COG1530	ribonuclease E activity
NMQ03_12285	COG0105	UTP biosynthetic process
NMQ03_12295	COG0285	dihydrofolate synthase activity
NMQ03_12300	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NMQ03_12315	COG3189	MarR family transcriptional regulator
NMQ03_12320	COG0525	valine-tRNA ligase activity
NMQ03_12325	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NMQ03_12330	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NMQ03_12335	COG0740	serine-type endopeptidase activity
NMQ03_12340	COG0740	serine-type endopeptidase activity
NMQ03_12345	COG0544	peptidyl-prolyl cis-trans isomerase activity
NMQ03_12390	COG0668	transmembrane transport
NMQ03_12405	COG1946	Acyl-CoA thioesterase
NMQ03_12415	COG2801	Transposase and inactivated derivatives
NMQ03_12440	COG0629	single-stranded DNA binding
NMQ03_12455	COG2115	Belongs to the xylose isomerase family
NMQ03_12460	COG1070	Carbohydrate kinase
NMQ03_12475	COG0673	inositol 2-dehydrogenase activity
NMQ03_12480	COG1609	Transcriptional regulator
NMQ03_12490	COG2017	converts alpha-aldose to the beta-anomer
NMQ03_12505	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NMQ03_12515	COG0242	peptide deformylase activity
NMQ03_12545	COG3022	response to hydroperoxide
NMQ03_12555	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NMQ03_12560	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NMQ03_12570	COG1045	serine acetyltransferase
NMQ03_12575	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NMQ03_12625	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NMQ03_12630	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NMQ03_12635	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NMQ03_12645	COG4974	Belongs to the 'phage' integrase family
NMQ03_12660	COG0792	nuclease activity
NMQ03_12670	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NMQ03_12680	COG0681	Belongs to the peptidase S26 family
NMQ03_12685	COG0335	large ribosomal subunit rRNA binding
NMQ03_12695	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NMQ03_12700	COG1837	Belongs to the UPF0109 family
NMQ03_12705	COG0228	four-way junction DNA binding
NMQ03_12740	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NMQ03_12765	COG1196	nuclear chromosome segregation
NMQ03_12770	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NMQ03_12780	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NMQ03_12785	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NMQ03_12790	COG0571	ribonuclease III activity
NMQ03_12795	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NMQ03_12805	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NMQ03_12820	COG0742	ribosomal rna small subunit methyltransferase
NMQ03_12825	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NMQ03_12830	COG1461	Dihydroxyacetone kinase
NMQ03_12845	COG1181	Belongs to the D-alanine--D-alanine ligase family
NMQ03_12850	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
NMQ03_12860	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NMQ03_12865	COG0066	3-isopropylmalate dehydratase activity
NMQ03_12870	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NMQ03_12875	COG1414	Transcriptional regulator
NMQ03_12920	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NMQ03_12925	COG0179	Fumarylacetoacetate (FAA) hydrolase
NMQ03_12930	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NMQ03_12940	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NMQ03_12945	COG0473	3-isopropylmalate dehydrogenase activity
NMQ03_12955	COG1136	(ABC) transporter
NMQ03_12955	COG0577	efflux transmembrane transporter activity
NMQ03_12965	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NMQ03_12970	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NMQ03_12975	COG0440	acetolactate synthase activity
NMQ03_12985	COG0129	dihydroxy-acid dehydratase activity
NMQ03_12990	COG0088	Forms part of the polypeptide exit tunnel
NMQ03_13025	COG0747	negative chemotaxis
NMQ03_13030	COG0579	oxidoreductase
NMQ03_13035	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NMQ03_13040	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMQ03_13050	COG1305	Transglutaminase-like
NMQ03_13070	COG1104	cysteine desulfurase activity
NMQ03_13080	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NMQ03_13085	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NMQ03_13095	COG1113	amino acid transport
NMQ03_13110	COG0477	Major facilitator Superfamily
NMQ03_13125	COG0419	ATPase involved in DNA repair
NMQ03_13130	COG0420	3'-5' exonuclease activity
NMQ03_13155	COG0586	Pfam SNARE associated Golgi protein
NMQ03_13160	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NMQ03_13165	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NMQ03_13170	COG1234	tRNA 3'-trailer cleavage
NMQ03_13175	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NMQ03_13185	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
NMQ03_13195	COG1335	isochorismatase
NMQ03_13210	COG0363	glucosamine-6-phosphate deaminase activity
NMQ03_13235	COG1902	pentaerythritol trinitrate reductase activity
NMQ03_13250	COG0628	permease
NMQ03_13265	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
NMQ03_13275	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NMQ03_13280	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
NMQ03_13290	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NMQ03_13295	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NMQ03_13300	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NMQ03_13305	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NMQ03_13310	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NMQ03_13315	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NMQ03_13320	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NMQ03_13325	COG0356	it plays a direct role in the translocation of protons across the membrane
NMQ03_13360	COG2890	protein-(glutamine-N5) methyltransferase activity
NMQ03_13365	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NMQ03_13375	COG0083	homoserine kinase activity
NMQ03_13380	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NMQ03_13385	COG0460	homoserine dehydrogenase
NMQ03_13390	COG0019	diaminopimelate decarboxylase activity
NMQ03_13395	COG0018	arginyl-trna synthetase
NMQ03_13410	COG1017	nitric oxide dioxygenase activity
NMQ03_13410	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NMQ03_13435	COG1643	Atp-dependent helicase
NMQ03_13440	COG0537	adenosine 5'-monophosphoramidase activity
NMQ03_13445	COG1064	alcohol dehydrogenase
NMQ03_13455	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NMQ03_13475	COG1121	(ABC) transporter
NMQ03_13480	COG0803	Belongs to the bacterial solute-binding protein 9 family
NMQ03_13490	COG1253	flavin adenine dinucleotide binding
NMQ03_13495	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMQ03_13495	COG0567	Dehydrogenase, E1 component
NMQ03_13530	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NMQ03_13540	COG0483	inositol monophosphate 1-phosphatase activity
NMQ03_13565	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NMQ03_13580	COG1063	alcohol dehydrogenase
NMQ03_13615	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
NMQ03_13630	COG2884	Cell division ATP-binding protein ftsE
NMQ03_13635	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NMQ03_13675	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
NMQ03_13675	COG5479	isomerase activity
NMQ03_13680	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NMQ03_13685	COG1088	dTDP-glucose 4,6-dehydratase activity
NMQ03_13695	COG1216	Glycosyl transferase, family 2
NMQ03_13710	COG1215	transferase activity, transferring glycosyl groups
NMQ03_13755	COG1216	Glycosyl transferase, family 2
NMQ03_13790	COG2902	Dehydrogenase
NMQ03_13830	COG3214	Protein conserved in bacteria
NMQ03_13835	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NMQ03_13845	COG5401	PFAM Sporulation and spore germination
NMQ03_13850	COG5002	protein histidine kinase activity
NMQ03_13875	COG0714	Associated with various cellular activities
NMQ03_13910	COG0601	transmembrane transport
NMQ03_13920	COG0482	sulfurtransferase activity
NMQ03_13945	COG0484	heat shock protein binding
NMQ03_13950	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NMQ03_13955	COG1595	DNA-templated transcription, initiation
NMQ03_13970	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
NMQ03_13975	COG2086	electron transfer activity
NMQ03_13980	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NMQ03_13990	COG1842	Phage shock protein A
NMQ03_13995	COG0415	Belongs to the DNA photolyase family
NMQ03_14040	COG2816	NAD+ diphosphatase activity
NMQ03_14050	COG0210	DNA helicase
NMQ03_14070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NMQ03_14075	COG0765	amino acid transport
NMQ03_14080	COG1126	abc transporter atp-binding protein
NMQ03_14085	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NMQ03_14095	COG0113	porphobilinogen synthase activity
NMQ03_14105	COG0181	hydroxymethylbilane synthase activity
NMQ03_14110	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
NMQ03_14115	COG3253	May function as heme-dependent peroxidase
NMQ03_14135	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
NMQ03_14140	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
NMQ03_14165	COG2022	thiamine diphosphate biosynthetic process
NMQ03_14175	COG2022	thiamine diphosphate biosynthetic process
NMQ03_14175	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NMQ03_14180	COG0352	thiamine-phosphate diphosphorylase activity
NMQ03_14190	COG0513	Belongs to the DEAD box helicase family
NMQ03_14195	COG2189	Belongs to the N(4) N(6)-methyltransferase family
NMQ03_14205	COG0006	proline dipeptidase activity
NMQ03_14215	COG2239	Acts as a magnesium transporter
NMQ03_14230	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NMQ03_14245	COG1595	DNA-templated transcription, initiation
NMQ03_14270	COG1611	Belongs to the LOG family
NMQ03_14275	COG1126	abc transporter atp-binding protein
NMQ03_14280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NMQ03_14285	COG0765	amino acid transport
NMQ03_14290	COG0765	amino acid transport
NMQ03_14295	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NMQ03_14320	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NMQ03_14345	COG1217	gtp-binding protein TYPA
NMQ03_14360	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NMQ03_14380	COG3152	Membrane
NMQ03_14385	COG0012	GTP binding
NMQ03_14390	COG1322	Protein conserved in bacteria
NMQ03_14395	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NMQ03_14405	COG1570	exodeoxyribonuclease VII activity
NMQ03_14410	COG1722	exodeoxyribonuclease VII activity
NMQ03_14415	COG2326	polyphosphate kinase activity
NMQ03_14430	COG1174	glycine betaine transport
NMQ03_14435	COG1174	glycine betaine transport
NMQ03_14450	COG2971	BadF BadG BcrA BcrD
NMQ03_14455	COG0583	DNA-binding transcription factor activity
NMQ03_14460	COG2814	Major facilitator Superfamily
NMQ03_14480	COG0598	Magnesium transport protein CorA
NMQ03_14495	COG0574	Belongs to the PEP-utilizing enzyme family
NMQ03_14495	COG3848	Pyruvate phosphate dikinase
NMQ03_14520	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NMQ03_14545	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NMQ03_14545	COG0519	Catalyzes the synthesis of GMP from XMP
NMQ03_14565	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
NMQ03_14570	COG0516	GMP reductase activity
NMQ03_14605	COG1132	(ABC) transporter
NMQ03_14620	COG2755	lipolytic protein G-D-S-L family
NMQ03_14620	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NMQ03_14630	COG1793	dna ligase
NMQ03_14640	COG0459	protein refolding
NMQ03_14645	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NMQ03_14660	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NMQ03_14665	COG1472	Belongs to the glycosyl hydrolase 3 family
NMQ03_14670	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
NMQ03_14680	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NMQ03_14695	COG0802	atpase or kinase
NMQ03_14700	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NMQ03_14710	COG1486	melibiose metabolic process
NMQ03_14715	COG0438	transferase activity, transferring glycosyl groups
NMQ03_14720	COG2759	Belongs to the formate--tetrahydrofolate ligase family
NMQ03_14735	COG0667	Aldo Keto reductase
NMQ03_14760	COG0736	holo-[acyl-carrier-protein] synthase activity
NMQ03_14770	COG1072	(Pantothenic acid kinase))
NMQ03_14775	COG1876	peptidase activity
NMQ03_14780	COG1970	mechanosensitive ion channel activity
NMQ03_14785	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NMQ03_14795	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NMQ03_14795	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NMQ03_14800	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NMQ03_14810	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NMQ03_14815	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NMQ03_14850	COG2894	cell division
NMQ03_14900	COG2894	cell division
NMQ03_14935	COG0101	tRNA pseudouridine synthase activity
NMQ03_14940	COG0203	ribosomal protein L17
NMQ03_14945	COG0202	RNA polymerase activity
NMQ03_14950	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NMQ03_14955	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NMQ03_14960	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NMQ03_14965	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NMQ03_14970	COG3191	aminopeptidase activity
NMQ03_14995	COG0563	adenylate kinase activity
NMQ03_15005	COG0200	Binds to the 23S rRNA
NMQ03_15010	COG1841	ribosomal large subunit assembly
NMQ03_15015	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NMQ03_15020	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NMQ03_15025	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NMQ03_15030	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NMQ03_15035	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NMQ03_15040	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NMQ03_15045	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NMQ03_15050	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NMQ03_15060	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NMQ03_15065	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NMQ03_15070	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NMQ03_15075	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NMQ03_15080	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NMQ03_15085	COG0089	rRNA binding
NMQ03_15090	COG0088	Forms part of the polypeptide exit tunnel
NMQ03_15095	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NMQ03_15100	COG0051	transcription antitermination factor activity, RNA binding
NMQ03_15115	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NMQ03_15120	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NMQ03_15125	COG0049	tRNA binding
NMQ03_15130	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NMQ03_15135	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NMQ03_15140	COG0085	RNA polymerase activity
NMQ03_15150	COG0183	Belongs to the thiolase family
NMQ03_15155	COG0442	prolyl-tRNA aminoacylation
NMQ03_15160	COG0222	ribosome binding
NMQ03_15165	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NMQ03_15180	COG0081	regulation of translation
NMQ03_15185	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NMQ03_15210	COG2197	response regulator
NMQ03_15265	COG3485	protocatechuate 3,4-dioxygenase
NMQ03_15275	COG0745	RESPONSE REGULATOR receiver
NMQ03_15280	COG0456	acetyltransferase
NMQ03_15285	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NMQ03_15300	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NMQ03_15340	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NMQ03_15355	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NMQ03_15360	COG0738	Major facilitator superfamily
NMQ03_15370	COG2030	dehydratase
NMQ03_15380	COG0659	secondary active sulfate transmembrane transporter activity
NMQ03_15400	COG4989	oxidoreductase activity
NMQ03_15405	COG0366	Alpha amylase catalytic
NMQ03_15410	COG1940	carbohydrate kinase activity
NMQ03_15420	COG0702	epimerase
NMQ03_15430	COG1140	nitrate reductase beta subunit
NMQ03_15470	COG0706	membrane insertase activity
NMQ03_15500	COG0754	glutathionylspermidine amidase activity
NMQ03_15515	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_15540	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NMQ03_15565	COG0318	PFAM AMP-dependent synthetase and ligase
NMQ03_15575	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NMQ03_15585	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NMQ03_15610	COG1666	GTP binding
NMQ03_15620	COG2822	iron ion transport
NMQ03_15625	COG2837	iron assimilation
NMQ03_15630	COG0501	Belongs to the peptidase M48B family
NMQ03_15655	COG0531	amino acid
NMQ03_15720	COG1215	transferase activity, transferring glycosyl groups
NMQ03_15735	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_15740	COG3835	regulator
NMQ03_15760	COG2186	Transcriptional regulator
NMQ03_15790	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NMQ03_15790	COG1648	precorrin-2 dehydrogenase activity
NMQ03_15805	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
NMQ03_15815	COG1690	Belongs to the RtcB family
NMQ03_15830	COG2895	sulfate adenylyltransferase (ATP) activity
NMQ03_15840	COG0175	sulfate reduction
NMQ03_15845	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NMQ03_15855	COG2860	membrane
NMQ03_15870	COG0142	geranyltranstransferase activity
NMQ03_15880	COG2226	methyltransferase
NMQ03_15885	COG1169	isochorismate synthase
NMQ03_15895	COG0765	amino acid transport
NMQ03_15900	COG1126	abc transporter atp-binding protein
NMQ03_15905	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
NMQ03_15910	COG1609	Transcriptional regulator
NMQ03_15915	COG1621	beta-fructofuranosidase activity
NMQ03_15920	COG0395	ABC-type sugar transport system, permease component
NMQ03_15925	COG1175	transmembrane transport
NMQ03_15945	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_15960	COG1914	H( )-stimulated, divalent metal cation uptake system
NMQ03_15965	COG0598	Magnesium transport protein CorA
NMQ03_15975	COG3559	Exporter of polyketide antibiotics
NMQ03_15980	COG1131	(ABC) transporter
NMQ03_16010	COG1309	transcriptional regulator
NMQ03_16030	COG2072	flavoprotein involved in K transport
NMQ03_16060	COG0492	ferredoxin-NADP+ reductase activity
NMQ03_16070	COG1846	Transcriptional regulator
NMQ03_16095	COG1316	TRANSCRIPTIONal
NMQ03_16105	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NMQ03_16105	COG2755	lipolytic protein G-D-S-L family
NMQ03_16115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMQ03_16125	COG3795	YCII-related domain
NMQ03_16130	COG4941	Belongs to the sigma-70 factor family
NMQ03_16135	COG1215	transferase activity, transferring glycosyl groups
NMQ03_16140	COG2188	Transcriptional regulator
NMQ03_16155	COG1597	lipid kinase activity
NMQ03_16165	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMQ03_16170	COG0022	dehydrogenase e1 component
NMQ03_16210	COG0297	glycogen (starch) synthase activity
NMQ03_16210	COG0438	transferase activity, transferring glycosyl groups
NMQ03_16220	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NMQ03_16255	COG0745	RESPONSE REGULATOR receiver
NMQ03_16285	COG2323	membrane
NMQ03_16315	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NMQ03_16320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NMQ03_16360	COG0076	glutamate decarboxylase activity
NMQ03_16365	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NMQ03_16395	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NMQ03_16400	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NMQ03_16445	COG0438	transferase activity, transferring glycosyl groups
NMQ03_16450	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
NMQ03_16455	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
NMQ03_16460	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NMQ03_16465	COG0489	protein tyrosine kinase activity
NMQ03_16490	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NMQ03_16500	COG0489	protein tyrosine kinase activity
NMQ03_16520	COG1024	Enoyl-CoA hydratase
NMQ03_16525	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NMQ03_16530	COG2151	metal-sulfur cluster biosynthetic enzyme
NMQ03_16535	COG3396	Phenylacetate-CoA oxygenase
NMQ03_16540	COG3460	Phenylacetate-CoA oxygenase
NMQ03_16545	COG3396	Phenylacetate-CoA oxygenase
NMQ03_16555	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NMQ03_16595	COG0667	Aldo Keto reductase
NMQ03_16600	COG0300	oxidoreductase activity
NMQ03_16615	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMQ03_16625	COG0640	Transcriptional regulator
NMQ03_16640	COG1247	-acetyltransferase
NMQ03_16655	COG0390	transport system, permease component
NMQ03_16660	COG2353	YceI-like domain
NMQ03_16675	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMQ03_16680	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMQ03_16700	COG1937	Protein conserved in bacteria
NMQ03_16705	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NMQ03_16720	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NMQ03_16750	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMQ03_16755	COG0022	dehydrogenase e1 component
NMQ03_16755	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMQ03_16760	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NMQ03_16765	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NMQ03_16800	COG3511	phospholipase C
NMQ03_16805	COG0277	FAD linked oxidase domain protein
NMQ03_16810	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
NMQ03_16835	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NMQ03_16840	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NMQ03_16845	COG1063	alcohol dehydrogenase
NMQ03_16865	COG3842	ATPase activity
NMQ03_16875	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NMQ03_16905	COG2217	Heavy metal translocating P-type atpase
NMQ03_16920	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMQ03_16925	COG1316	TRANSCRIPTIONal
NMQ03_16935	COG0588	phosphoglycerate mutase activity
NMQ03_16940	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NMQ03_16945	COG0071	Belongs to the small heat shock protein (HSP20) family
NMQ03_16980	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NMQ03_17005	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_17010	COG1802	Transcriptional regulator
NMQ03_17020	COG2271	Major facilitator Superfamily
NMQ03_17025	COG0280	phosphate acetyltransferase
NMQ03_17025	COG0857	belongs to the CobB CobQ family
NMQ03_17030	COG2050	protein possibly involved in aromatic compounds catabolism
NMQ03_17045	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NMQ03_17060	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_17060	COG2030	dehydratase
NMQ03_17065	COG2050	protein possibly involved in aromatic compounds catabolism
NMQ03_17085	COG2755	lipolytic protein G-D-S-L family
NMQ03_17105	COG1024	Enoyl-CoA hydratase
NMQ03_17140	COG1266	CAAX protease self-immunity
NMQ03_17150	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NMQ03_17205	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NMQ03_17215	COG0785	Cytochrome C biogenesis protein
NMQ03_17220	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NMQ03_17225	COG0406	alpha-ribazole phosphatase activity
NMQ03_17230	COG2353	YceI-like domain
NMQ03_17240	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NMQ03_17265	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NMQ03_17270	COG3458	cephalosporin-C deacetylase activity
NMQ03_17275	COG1070	Carbohydrate kinase
NMQ03_17280	COG1028	Short-chain dehydrogenase reductase Sdr
NMQ03_17280	COG3347	Dehydrogenase
NMQ03_17285	COG4952	isomerase
NMQ03_17295	COG1609	Transcriptional regulator
NMQ03_17320	COG0395	ABC-type sugar transport system, permease component
NMQ03_17325	COG4209	transmembrane transport
NMQ03_17330	COG1653	transport
NMQ03_17335	COG5578	integral membrane protein
NMQ03_17345	COG2814	Major facilitator Superfamily
NMQ03_17355	COG0395	ABC-type sugar transport system, permease component
NMQ03_17360	COG1175	transmembrane transport
NMQ03_17385	COG0395	ABC-type sugar transport system, permease component
NMQ03_17390	COG1175	transmembrane transport
NMQ03_17420	COG4948	Mandelate Racemase Muconate Lactonizing
NMQ03_17425	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NMQ03_17435	COG0673	inositol 2-dehydrogenase activity
NMQ03_17450	COG2211	Major facilitator Superfamily
NMQ03_17450	COG2190	(PTS) system
NMQ03_17460	COG2186	Transcriptional regulator
NMQ03_17470	COG0640	Transcriptional regulator
NMQ03_17475	COG0123	including yeast histone deacetylase and acetoin utilization protein
NMQ03_17480	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NMQ03_17485	COG0569	domain protein
NMQ03_17490	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NMQ03_17495	COG0248	Ppx GppA phosphatase
NMQ03_17505	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NMQ03_17505	COG1754	DNA topoisomerase type I activity
NMQ03_17510	COG2890	protein-(glutamine-N5) methyltransferase activity
NMQ03_17525	COG1054	Belongs to the UPF0176 family
NMQ03_17535	COG1205	dead DEAH box helicase
NMQ03_17535	COG1111	helicase
NMQ03_17585	COG0494	nUDIX hydrolase
NMQ03_17600	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NMQ03_17605	COG1349	DNA-binding transcription factor activity
NMQ03_17625	COG0395	ABC-type sugar transport system, permease component
NMQ03_17630	COG1653	transport
NMQ03_17640	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NMQ03_17665	COG1175	transmembrane transport
NMQ03_17675	COG1609	Transcriptional regulator
NMQ03_17695	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NMQ03_17700	COG1408	metallophosphoesterase
NMQ03_17705	COG1132	(ABC) transporter
NMQ03_17710	COG1132	(ABC) transporter
NMQ03_17730	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
NMQ03_17735	COG0151	Belongs to the GarS family
NMQ03_17765	COG1953	Uracil, thiamine, allantoin
NMQ03_17795	COG0667	Aldo Keto reductase
NMQ03_17800	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NMQ03_17810	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
NMQ03_17810	COG3608	succinylglutamate desuccinylase aspartoacylase
NMQ03_17815	COG2252	PERMEase
NMQ03_17820	COG0590	tRNA wobble adenosine to inosine editing
NMQ03_17850	COG2233	PERMEase
NMQ03_17855	COG1414	Transcriptional regulator
NMQ03_17865	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NMQ03_17875	COG3257	ureidoglycine aminohydrolase activity
NMQ03_17890	COG0546	phosphoglycolate phosphatase activity
NMQ03_17900	COG3387	PFAM Glycoside hydrolase 15-related
NMQ03_17925	COG0484	heat shock protein binding
NMQ03_17930	COG0071	Belongs to the small heat shock protein (HSP20) family
NMQ03_17935	COG0789	Transcriptional regulator
NMQ03_17950	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NMQ03_17955	COG0563	adenylate kinase activity
NMQ03_17965	COG0745	RESPONSE REGULATOR receiver
NMQ03_17970	COG2267	carboxylic ester hydrolase activity
NMQ03_17975	COG0640	Transcriptional regulator
NMQ03_17995	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMQ03_18005	COG0579	oxidoreductase
NMQ03_18045	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NMQ03_18045	COG4499	WXG100 protein secretion system (Wss), protein YukC
NMQ03_18095	COG2070	2-Nitropropane dioxygenase
NMQ03_18100	COG1064	alcohol dehydrogenase
NMQ03_18105	COG1063	alcohol dehydrogenase
NMQ03_18140	COG0129	dihydroxy-acid dehydratase activity
NMQ03_18165	COG2508	Transcriptional regulator
NMQ03_18185	COG0477	Major facilitator Superfamily
NMQ03_18230	COG2199	diguanylate cyclase activity
NMQ03_18230	COG2200	EAL domain
NMQ03_18230	COG2202	Pas domain
NMQ03_18265	COG0454	-acetyltransferase
NMQ03_18295	COG1960	acyl-CoA dehydrogenase activity
NMQ03_18300	COG0583	DNA-binding transcription factor activity
NMQ03_18305	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NMQ03_18310	COG0824	Thioesterase
NMQ03_18315	COG1960	acyl-CoA dehydrogenase activity
NMQ03_18335	COG0477	Major facilitator Superfamily
NMQ03_18355	COG2807	transmembrane transport
NMQ03_18365	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
NMQ03_18370	COG4251	negative regulation of phosphorylation
NMQ03_18380	COG2329	Antibiotic biosynthesis monooxygenase
NMQ03_18390	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NMQ03_18395	COG2197	response regulator
NMQ03_18400	COG4585	Histidine kinase
NMQ03_18410	COG1136	(ABC) transporter
NMQ03_18410	COG0577	efflux transmembrane transporter activity
NMQ03_18460	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NMQ03_18485	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NMQ03_18550	COG1473	amidohydrolase
NMQ03_18555	COG0477	Major facilitator Superfamily
NMQ03_18560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NMQ03_18570	COG3622	Belongs to the hyi family
NMQ03_18575	COG2084	Dehydrogenase
NMQ03_18580	COG3960	tartronate-semialdehyde synthase activity
NMQ03_18585	COG1929	Belongs to the glycerate kinase type-1 family
NMQ03_18590	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NMQ03_18625	COG0745	RESPONSE REGULATOR receiver
NMQ03_18635	COG1366	Belongs to the anti-sigma-factor antagonist family
NMQ03_18650	COG2351	hydroxyisourate hydrolase activity
NMQ03_18655	COG1414	Transcriptional regulator
NMQ03_18660	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NMQ03_18670	COG1802	Transcriptional regulator
NMQ03_18685	COG3404	Formiminotransferase-cyclodeaminase
NMQ03_18690	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NMQ03_18700	COG2271	Major facilitator Superfamily
NMQ03_18745	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
NMQ03_18755	COG2267	carboxylic ester hydrolase activity
NMQ03_18790	COG3585	molybdate ion transport
NMQ03_18805	COG3304	Inner membrane component domain
NMQ03_18810	COG0135	phosphoribosylanthranilate isomerase activity
NMQ03_18825	COG2076	Multidrug Resistance protein
NMQ03_18835	COG0667	Aldo Keto reductase
NMQ03_18865	COG2807	transmembrane transport
NMQ03_18875	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NMQ03_18950	COG0673	inositol 2-dehydrogenase activity
NMQ03_18980	COG3226	Transcriptional regulator
NMQ03_19005	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NMQ03_19030	COG1309	transcriptional regulator
NMQ03_19040	COG1760	l-serine dehydratase
NMQ03_19065	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NMQ03_19085	COG1605	Chorismate mutase
NMQ03_19085	COG0077	Prephenate dehydratase
NMQ03_19095	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NMQ03_19115	COG3971	2-oxopent-4-enoate hydratase activity
NMQ03_19130	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_19140	COG0789	Transcriptional regulator
NMQ03_19145	COG0484	heat shock protein binding
NMQ03_19150	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NMQ03_19155	COG0443	Heat shock 70 kDa protein
NMQ03_19160	COG0640	Transcriptional regulator
NMQ03_19165	COG2814	Major facilitator Superfamily
NMQ03_19185	COG2409	Drug exporters of the RND superfamily
NMQ03_19200	COG1280	lysine exporter protein (LysE YggA)
NMQ03_19205	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMQ03_19215	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NMQ03_19215	COG0512	Glutamine amidotransferase of anthranilate synthase
NMQ03_19220	COG2814	Major facilitator Superfamily
NMQ03_19225	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMQ03_19275	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
NMQ03_19280	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NMQ03_19290	COG1122	ATPase activity
NMQ03_19295	COG4721	ABC-type cobalt transport system, permease component
NMQ03_19300	COG4702	Belongs to the UPF0303 family
NMQ03_19325	COG1320	monovalent cation:proton antiporter activity
NMQ03_19330	COG2212	antiporter activity
NMQ03_19340	COG0651	ATP synthesis coupled electron transport
NMQ03_19345	COG1006	Multisubunit Na H antiporter MnhC subunit
NMQ03_19350	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NMQ03_19350	COG2111	Na H antiporter
NMQ03_19365	COG0475	glutathione-regulated potassium exporter activity
NMQ03_19370	COG0717	Belongs to the dCTP deaminase family
NMQ03_19400	COG0583	DNA-binding transcription factor activity
NMQ03_19410	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_19415	COG0531	amino acid
NMQ03_19420	COG0583	DNA-binding transcription factor activity
NMQ03_19425	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
NMQ03_19445	COG2814	Major facilitator Superfamily
NMQ03_19450	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMQ03_19455	COG0667	Aldo Keto reductase
NMQ03_19465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NMQ03_19475	COG2814	Major facilitator Superfamily
NMQ03_19480	COG0583	DNA-binding transcription factor activity
NMQ03_19510	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NMQ03_19515	COG4638	Rieske (2fe-2S)
NMQ03_19520	COG3485	protocatechuate 3,4-dioxygenase
NMQ03_19540	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_19560	COG3845	ABC transporter
NMQ03_19565	COG1410	methionine synthase
NMQ03_19565	COG0646	methionine synthase
NMQ03_19635	COG4974	Belongs to the 'phage' integrase family
NMQ03_19655	COG2267	carboxylic ester hydrolase activity
NMQ03_19680	COG1802	Transcriptional regulator
NMQ03_19690	COG3842	ATPase activity
NMQ03_19700	COG1840	ABC-type Fe3 transport system, periplasmic component
NMQ03_19710	COG0583	DNA-binding transcription factor activity
NMQ03_19715	COG2828	Protein conserved in bacteria
NMQ03_19720	COG1301	dicarboxylic acid transport
NMQ03_19730	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMQ03_19740	COG1126	abc transporter atp-binding protein
NMQ03_19745	COG0765	amino acid transport
NMQ03_19760	COG0433	COG0433 Predicted ATPase
NMQ03_19780	COG3336	cytochrome c oxidase
NMQ03_19785	COG0776	regulation of translation
NMQ03_19810	COG1609	Transcriptional regulator
NMQ03_19830	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NMQ03_19835	COG0267	Belongs to the bacterial ribosomal protein bL33 family
NMQ03_19840	COG0227	Belongs to the bacterial ribosomal protein bL28 family
NMQ03_19845	COG1017	nitric oxide dioxygenase activity
NMQ03_19845	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NMQ03_19885	COG1120	ATPase activity
NMQ03_19890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NMQ03_19895	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NMQ03_19945	COG3012	SEC-C Motif Domain Protein
NMQ03_19955	COG0667	Aldo Keto reductase
NMQ03_19960	COG0702	epimerase
NMQ03_20000	COG1525	nuclease
NMQ03_20005	COG0671	phosphoesterase, PA-phosphatase related
NMQ03_20010	COG0586	Pfam SNARE associated Golgi protein
NMQ03_20015	COG2186	Transcriptional regulator
NMQ03_20025	COG1027	Aspartate ammonia-lyase
NMQ03_20035	COG0405	Gamma-glutamyltransferase
NMQ03_20040	COG0039	L-malate dehydrogenase activity
NMQ03_20060	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NMQ03_20075	COG1522	sequence-specific DNA binding
NMQ03_20080	COG1280	lysine exporter protein (LysE YggA)
NMQ03_20105	COG1309	transcriptional regulator
NMQ03_20120	COG0477	Major facilitator Superfamily
NMQ03_20125	COG0477	Major facilitator Superfamily
NMQ03_20130	COG2814	Major facilitator Superfamily
NMQ03_20145	COG0246	Mannitol dehydrogenase
NMQ03_20150	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NMQ03_20150	COG2213	PTS system mannitol-specific
NMQ03_20160	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMQ03_20170	COG0596	Alpha beta hydrolase
NMQ03_20180	COG0686	Belongs to the AlaDH PNT family
NMQ03_20185	COG0673	inositol 2-dehydrogenase activity
NMQ03_20215	COG0431	NADPH-dependent FMN reductase
NMQ03_20225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NMQ03_20245	COG0508	dehydrogenase complex catalyzes the overall conversion of
NMQ03_20250	COG0022	dehydrogenase e1 component
NMQ03_20260	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NMQ03_20285	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NMQ03_20290	COG0406	alpha-ribazole phosphatase activity
NMQ03_20295	COG2815	serine threonine protein kinase
NMQ03_20295	COG0515	serine threonine protein kinase
NMQ03_20315	COG1607	acyl-coa hydrolase
NMQ03_20320	COG1840	ABC-type Fe3 transport system, periplasmic component
NMQ03_20325	COG3842	ATPase activity
NMQ03_20330	COG1178	ABC-type Fe3 transport system permease component
NMQ03_20340	COG1309	transcriptional regulator
NMQ03_20350	COG1414	Transcriptional regulator
NMQ03_20365	COG2271	Major facilitator Superfamily
NMQ03_20370	COG1802	Transcriptional regulator
NMQ03_20380	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NMQ03_20390	COG1597	lipid kinase activity
NMQ03_20410	COG2186	Transcriptional regulator
NMQ03_20415	COG2159	amidohydrolase
NMQ03_20425	COG1414	Transcriptional regulator
NMQ03_20430	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NMQ03_20435	COG0477	Major facilitator Superfamily
NMQ03_20440	COG1414	Transcriptional regulator
NMQ03_20445	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NMQ03_20455	COG0183	Belongs to the thiolase family
NMQ03_20460	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NMQ03_20475	COG3485	protocatechuate 3,4-dioxygenase
NMQ03_20480	COG3485	protocatechuate 3,4-dioxygenase
NMQ03_20485	COG3185	4-Hydroxyphenylpyruvate dioxygenase
NMQ03_20485	COG1082	Xylose isomerase domain protein TIM barrel
NMQ03_20490	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NMQ03_20495	COG1414	Transcriptional regulator
NMQ03_20500	COG0477	Major facilitator Superfamily
NMQ03_20505	COG1793	dna ligase
NMQ03_20540	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NMQ03_20545	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NMQ03_20560	COG1012	belongs to the aldehyde dehydrogenase family
NMQ03_20565	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NMQ03_20575	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NMQ03_20640	COG1937	Protein conserved in bacteria
NMQ03_20665	COG0697	spore germination
NMQ03_20690	COG2259	Doxx family
NMQ03_20700	COG0305	Participates in initiation and elongation during chromosome replication
NMQ03_20725	COG0359	binds to the 23S rRNA
NMQ03_20730	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NMQ03_20740	COG0360	Binds together with S18 to 16S ribosomal RNA
NMQ03_20755	COG2244	polysaccharide biosynthetic process
NMQ03_20765	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NMQ03_20785	COG1216	Glycosyl transferase, family 2
NMQ03_20795	COG0463	Glycosyl transferase, family 2
NMQ03_20810	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NMQ03_20815	COG0673	inositol 2-dehydrogenase activity
NMQ03_20820	COG1088	dTDP-glucose 4,6-dehydratase activity
NMQ03_20825	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NMQ03_20840	COG2244	polysaccharide biosynthetic process
NMQ03_20845	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NMQ03_20855	COG2755	lipolytic protein G-D-S-L family
NMQ03_20855	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NMQ03_20860	COG0489	protein tyrosine kinase activity
NMQ03_20860	COG3206	protein involved in exopolysaccharide biosynthesis
NMQ03_20890	COG1362	aminopeptidase activity
NMQ03_20895	COG1113	amino acid transport
NMQ03_20915	COG0738	Major facilitator superfamily
NMQ03_20925	COG0488	(ABC) transporter
NMQ03_20930	COG0768	penicillin binding
NMQ03_20945	COG0406	alpha-ribazole phosphatase activity
NMQ03_20950	COG0617	tRNA 3'-terminal CCA addition
NMQ03_20970	COG0492	ferredoxin-NADP+ reductase activity
NMQ03_20975	COG3118	belongs to the thioredoxin family
NMQ03_20985	COG1192	Involved in chromosome partitioning
NMQ03_20990	COG0357	Ribosomal RNA small subunit methyltransferase G
NMQ03_21000	COG0706	membrane insertase activity
NMQ03_21005	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
NMQ03_21010	COG0594	ribonuclease P activity
NMQ03_21015	COG0230	Belongs to the bacterial ribosomal protein bL34 family