locus-tag class description LFT46_00005 PF00308 Bacterial dnaA protein LFT46_00005 PF08299 Bacterial dnaA protein helix-turn-helix LFT46_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LFT46_00010 PF02767 DNA polymerase III beta subunit, central domain LFT46_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LFT46_00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LFT46_00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_00020 PF02463 RecF/RecN/SMC N terminal domain LFT46_00025 PF05258 Dna[CI] antecedent, DciA LFT46_00030 PF00204 DNA gyrase B LFT46_00030 PF00986 DNA gyrase B subunit, carboxyl terminus LFT46_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_00030 PF01751 Toprim domain LFT46_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A LFT46_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller LFT46_00040 PF12089 Transmembrane domain of unknown function (DUF3566) LFT46_00065 PF00535 Glycosyl transferase family 2 LFT46_00075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFT46_00085 PF02627 Carboxymuconolactone decarboxylase family LFT46_00090 PF03352 Methyladenine glycosylase LFT46_00095 PF06781 Cell division protein CrgA LFT46_00100 PF04203 Sortase domain LFT46_00110 PF00117 Glutamine amidotransferase class-I LFT46_00115 PF03793 PASTA domain LFT46_00115 PF00069 Protein kinase domain LFT46_00120 PF00069 Protein kinase domain LFT46_00125 PF00905 Penicillin binding protein transpeptidase domain LFT46_00130 PF01098 Cell cycle protein LFT46_00140 PF16697 Inner membrane component of T3SS, cytoplasmic domain LFT46_00145 PF12401 Protein of unknown function (DUF2662) LFT46_00145 PF00498 FHA domain LFT46_00155 PF07729 FCD domain LFT46_00155 PF00392 Bacterial regulatory proteins, gntR family LFT46_00160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_00160 PF13378 Enolase C-terminal domain-like LFT46_00165 PF04055 Radical SAM superfamily LFT46_00175 PF01593 Flavin containing amine oxidoreductase LFT46_00195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT46_00225 PF12802 MarR family LFT46_00250 PF01565 FAD binding domain LFT46_00250 PF04030 D-arabinono-1,4-lactone oxidase LFT46_00260 PF01425 Amidase LFT46_00265 PF04371 Porphyromonas-type peptidyl-arginine deiminase LFT46_00275 PF03193 RsgA GTPase LFT46_00280 PF01595 Cyclin M transmembrane N-terminal domain LFT46_00280 PF00571 CBS domain LFT46_00285 PF01595 Cyclin M transmembrane N-terminal domain LFT46_00285 PF03471 Transporter associated domain LFT46_00285 PF00571 CBS domain LFT46_00295 PF17151 Periplasmic sensor domain LFT46_00295 PF00990 Diguanylate cyclase, GGDEF domain LFT46_00300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_00300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_00315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_00315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_00320 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_00325 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_00330 PF01547 Bacterial extracellular solute-binding protein LFT46_00335 PF00356 Bacterial regulatory proteins, lacI family LFT46_00340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_00340 PF13378 Enolase C-terminal domain-like LFT46_00345 PF00756 Putative esterase LFT46_00345 PF00331 Glycosyl hydrolase family 10 LFT46_00345 PF03422 Carbohydrate binding module (family 6) LFT46_00345 PF00404 Dockerin type I domain LFT46_00350 PF00356 Bacterial regulatory proteins, lacI family LFT46_00355 PF01522 Polysaccharide deacetylase LFT46_00360 PF00356 Bacterial regulatory proteins, lacI family LFT46_00365 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT46_00370 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_00375 PF00005 ABC transporter LFT46_00380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_00380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_00385 PF01266 FAD dependent oxidoreductase LFT46_00390 PF01740 STAS domain LFT46_00390 PF00916 Sulfate permease family LFT46_00420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_00420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT46_00425 PF00083 Sugar (and other) transporter LFT46_00425 PF07690 Major Facilitator Superfamily LFT46_00440 PF01970 Tripartite tricarboxylate transporter TctA family LFT46_00450 PF03737 Aldolase/RraA LFT46_00490 PF17755 UvrA DNA-binding domain LFT46_00490 PF17760 UvrA interaction domain LFT46_00490 PF00005 ABC transporter LFT46_00510 PF13181 Tetratricopeptide repeat LFT46_00510 PF17128 Domain of unknown function (DUF5107) LFT46_00525 PF01301 Glycosyl hydrolases family 35 LFT46_00530 PF02311 AraC-like ligand binding domain LFT46_00530 PF12833 Helix-turn-helix domain LFT46_00540 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_00540 PF00107 Zinc-binding dehydrogenase LFT46_00550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_00550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT46_00555 PF00083 Sugar (and other) transporter LFT46_00565 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT46_00570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT46_00580 PF01842 ACT domain LFT46_00580 PF00742 Homoserine dehydrogenase LFT46_00580 PF03447 Homoserine dehydrogenase, NAD binding domain LFT46_00590 PF00356 Bacterial regulatory proteins, lacI family LFT46_00595 PF01156 Inosine-uridine preferring nucleoside hydrolase LFT46_00600 PF07690 Major Facilitator Superfamily LFT46_00605 PF00294 pfkB family carbohydrate kinase LFT46_00610 PF00106 short chain dehydrogenase LFT46_00635 PF00294 pfkB family carbohydrate kinase LFT46_00655 PF13438 Domain of unknown function (DUF4113) LFT46_00655 PF00817 impB/mucB/samB family LFT46_00655 PF11799 impB/mucB/samB family C-terminal domain LFT46_00655 PF11798 IMS family HHH motif LFT46_00660 PF00717 Peptidase S24-like LFT46_00680 PF03009 Glycerophosphoryl diester phosphodiesterase family LFT46_00695 PF00990 Diguanylate cyclase, GGDEF domain LFT46_00695 PF01590 GAF domain LFT46_00695 PF00989 PAS fold LFT46_00695 PF00563 EAL domain LFT46_00700 PF00563 EAL domain LFT46_00700 PF03707 Bacterial signalling protein N terminal repeat LFT46_00700 PF00990 Diguanylate cyclase, GGDEF domain LFT46_00705 PF00672 HAMP domain LFT46_00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_00705 PF18698 Histidine kinase sensor domain LFT46_00705 PF00512 His Kinase A (phospho-acceptor) domain LFT46_00705 PF00989 PAS fold LFT46_00730 PF02595 Glycerate kinase family LFT46_00770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_00770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_00775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_00775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_00785 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_00790 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_00810 PF01047 MarR family LFT46_00810 PF00480 ROK family LFT46_00830 PF00860 Permease family LFT46_00835 PF00881 Nitroreductase family LFT46_00845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFT46_00845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFT46_00845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFT46_00845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFT46_00855 PF03466 LysR substrate binding domain LFT46_00855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_00860 PF01810 LysE type translocator LFT46_00870 PF07729 FCD domain LFT46_00870 PF00392 Bacterial regulatory proteins, gntR family LFT46_00880 PF02515 CoA-transferase family III LFT46_00885 PF01039 Carboxyl transferase domain LFT46_00895 PF06305 Lipopolysaccharide assembly protein A domain LFT46_00910 PF01425 Amidase LFT46_00915 PF00581 Rhodanese-like domain LFT46_00920 PF01842 ACT domain LFT46_00920 PF00800 Prephenate dehydratase LFT46_00930 PF00781 Diacylglycerol kinase catalytic domain LFT46_00935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT46_00935 PF02403 Seryl-tRNA synthetase N-terminal domain LFT46_00950 PF00300 Histidine phosphatase superfamily (branch 1) LFT46_00960 PF06628 Catalase-related immune-responsive LFT46_00960 PF18011 C-terminal domain found in long catalases LFT46_00960 PF00199 Catalase LFT46_00965 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LFT46_00965 PF09363 XFP C-terminal domain LFT46_00965 PF09364 XFP N-terminal domain LFT46_00975 PF00135 Carboxylesterase family LFT46_00980 PF00719 Inorganic pyrophosphatase LFT46_00995 PF01171 PP-loop family LFT46_00995 PF09179 TilS substrate binding domain LFT46_01000 PF00156 Phosphoribosyl transferase domain LFT46_01005 PF00004 ATPase family associated with various cellular activities (AAA) LFT46_01005 PF17862 AAA+ lid domain LFT46_01005 PF01434 Peptidase family M41 LFT46_01010 PF01227 GTP cyclohydrolase I LFT46_01015 PF00809 Pterin binding enzyme LFT46_01020 PF02152 Dihydroneopterin aldolase LFT46_01025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LFT46_01050 PF02569 Pantoate-beta-alanine ligase LFT46_01070 PF01965 DJ-1/PfpI family LFT46_01075 PF07690 Major Facilitator Superfamily LFT46_01085 PF00440 Bacterial regulatory proteins, tetR family LFT46_01085 PF17932 Tetracyclin repressor-like, C-terminal domain LFT46_01100 PF09347 Domain of unknown function (DUF1989) LFT46_01105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT46_01105 PF02785 Biotin carboxylase C-terminal domain LFT46_01105 PF00289 Biotin carboxylase, N-terminal domain LFT46_01110 PF01425 Amidase LFT46_01120 PF01336 OB-fold nucleic acid binding domain LFT46_01120 PF00152 tRNA synthetases class II (D, K and N) LFT46_01130 PF11774 Lsr2 LFT46_01140 PF02861 Clp amino terminal domain, pathogenicity island component LFT46_01140 PF10431 C-terminal, D2-small domain, of ClpB protein LFT46_01140 PF07724 AAA domain (Cdc48 subfamily) LFT46_01140 PF00004 ATPase family associated with various cellular activities (AAA) LFT46_01140 PF17871 AAA lid domain LFT46_01145 PF07676 WD40-like Beta Propeller Repeat LFT46_01145 PF00326 Prolyl oligopeptidase family LFT46_01145 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LFT46_01150 PF00583 Acetyltransferase (GNAT) family LFT46_01155 PF02733 Dak1 domain LFT46_01160 PF02734 DAK2 domain LFT46_01165 PF03610 PTS system fructose IIA component LFT46_01180 PF00730 HhH-GPD superfamily base excision DNA repair protein LFT46_01180 PF00633 Helix-hairpin-helix motif LFT46_01190 PF00633 Helix-hairpin-helix motif LFT46_01190 PF02457 DisA bacterial checkpoint controller nucleotide-binding LFT46_01190 PF10635 DisA bacterial checkpoint controller linker region LFT46_01195 PF01757 Acyltransferase family LFT46_01210 PF00009 Elongation factor Tu GTP binding domain LFT46_01210 PF16658 Class II release factor RF3, C-terminal domain LFT46_01215 PF02801 Beta-ketoacyl synthase, C-terminal domain LFT46_01215 PF00109 Beta-ketoacyl synthase, N-terminal domain LFT46_01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_01230 PF00512 His Kinase A (phospho-acceptor) domain LFT46_01235 PF18073 Rubredoxin metal binding domain LFT46_01245 PF12849 PBP superfamily domain LFT46_01250 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_01255 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_01260 PF00005 ABC transporter LFT46_01275 PF01384 Phosphate transporter family LFT46_01305 PF00356 Bacterial regulatory proteins, lacI family LFT46_01320 PF04542 Sigma-70 region 2 LFT46_01320 PF08281 Sigma-70, region 4 LFT46_01340 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LFT46_01350 PF00356 Bacterial regulatory proteins, lacI family LFT46_01360 PF00547 Urease, gamma subunit LFT46_01365 PF00699 Urease beta subunit LFT46_01370 PF01979 Amidohydrolase family LFT46_01370 PF00449 Urease alpha-subunit, N-terminal domain LFT46_01375 PF02814 UreE urease accessory protein, N-terminal domain LFT46_01380 PF01730 UreF LFT46_01385 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFT46_01390 PF01774 UreD urease accessory protein LFT46_01395 PF03824 High-affinity nickel-transport protein LFT46_01410 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_01415 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_01420 PF00232 Glycosyl hydrolase family 1 LFT46_01425 PF00356 Bacterial regulatory proteins, lacI family LFT46_01435 PF00392 Bacterial regulatory proteins, gntR family LFT46_01435 PF07729 FCD domain LFT46_01440 PF02780 Transketolase, C-terminal domain LFT46_01440 PF02779 Transketolase, pyrimidine binding domain LFT46_01445 PF00456 Transketolase, thiamine diphosphate binding domain LFT46_01450 PF07690 Major Facilitator Superfamily LFT46_01450 PF00083 Sugar (and other) transporter LFT46_01470 PF02502 Ribose/Galactose Isomerase LFT46_01485 PF00135 Carboxylesterase family LFT46_01500 PF00582 Universal stress protein family LFT46_01515 PF07729 FCD domain LFT46_01515 PF00392 Bacterial regulatory proteins, gntR family LFT46_01525 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_01530 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_01535 PF13378 Enolase C-terminal domain-like LFT46_01535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_01540 PF01081 KDPG and KHG aldolase LFT46_01545 PF00294 pfkB family carbohydrate kinase LFT46_01550 PF13378 Enolase C-terminal domain-like LFT46_01550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_01555 PF13847 Methyltransferase domain LFT46_01565 PF01758 Sodium Bile acid symporter family LFT46_01570 PF01568 Molydopterin dinucleotide binding domain LFT46_01570 PF00384 Molybdopterin oxidoreductase LFT46_01570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFT46_01580 PF13411 MerR HTH family regulatory protein LFT46_01595 PF00892 EamA-like transporter family LFT46_01610 PF00248 Aldo/keto reductase family LFT46_01620 PF02446 4-alpha-glucanotransferase LFT46_01625 PF00128 Alpha amylase, catalytic domain LFT46_01625 PF02806 Alpha amylase, C-terminal all-beta domain LFT46_01625 PF03714 Bacterial pullanase-associated domain LFT46_01635 PF17827 PrmC N-terminal domain LFT46_01635 PF05175 Methyltransferase small domain LFT46_01650 PF04226 Transglycosylase associated protein LFT46_01655 PF00248 Aldo/keto reductase family LFT46_01660 PF18370 Rhamnogalacturonan I lyases beta-sheet domain LFT46_01665 PF13193 AMP-binding enzyme C-terminal domain LFT46_01665 PF00501 AMP-binding enzyme LFT46_01670 PF02803 Thiolase, C-terminal domain LFT46_01670 PF00108 Thiolase, N-terminal domain LFT46_01675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_01675 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_01675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_01680 PF17754 MftR C-terminal domain LFT46_01680 PF00440 Bacterial regulatory proteins, tetR family LFT46_01690 PF00248 Aldo/keto reductase family LFT46_01695 PF00248 Aldo/keto reductase family LFT46_01710 PF07311 Dodecin LFT46_01715 PF07729 FCD domain LFT46_01715 PF00392 Bacterial regulatory proteins, gntR family LFT46_01725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT46_01725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_01730 PF02447 GntP family permease LFT46_01735 PF01116 Fructose-bisphosphate aldolase class-II LFT46_01755 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_01775 PF00083 Sugar (and other) transporter LFT46_01785 PF13298 DNA polymerase Ligase (LigD) LFT46_01785 PF01068 ATP dependent DNA ligase domain LFT46_01785 PF04679 ATP dependent DNA ligase C terminal region LFT46_01790 PF02735 Ku70/Ku80 beta-barrel domain LFT46_01795 PF13649 Methyltransferase domain LFT46_01810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFT46_01810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFT46_01815 PF00294 pfkB family carbohydrate kinase LFT46_01820 PF08220 DeoR-like helix-turn-helix domain LFT46_01820 PF00455 DeoR C terminal sensor domain LFT46_01835 PF13419 Haloacid dehalogenase-like hydrolase LFT46_01840 PF03633 Glycosyl hydrolase family 65, C-terminal domain LFT46_01840 PF03632 Glycosyl hydrolase family 65 central catalytic domain LFT46_01840 PF03636 Glycosyl hydrolase family 65, N-terminal domain LFT46_01845 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LFT46_01845 PF04055 Radical SAM superfamily LFT46_01850 PF03313 Serine dehydratase alpha chain LFT46_01850 PF03315 Serine dehydratase beta chain LFT46_01855 PF00464 Serine hydroxymethyltransferase LFT46_01860 PF01597 Glycine cleavage H-protein LFT46_01865 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT46_01865 PF01571 Aminomethyltransferase folate-binding domain LFT46_01870 PF02347 Glycine cleavage system P-protein LFT46_01875 PF00324 Amino acid permease LFT46_01880 PF00551 Formyl transferase LFT46_01895 PF03746 LamB/YcsF family LFT46_01905 PF04286 Protein of unknown function (DUF445) LFT46_01910 PF03009 Glycerophosphoryl diester phosphodiesterase family LFT46_01915 PF02515 CoA-transferase family III LFT46_01955 PF01910 Thiamine-binding protein LFT46_01960 PF01596 O-methyltransferase LFT46_01985 PF03631 Virulence factor BrkB LFT46_02010 PF01370 NAD dependent epimerase/dehydratase family LFT46_02015 PF04545 Sigma-70, region 4 LFT46_02015 PF04539 Sigma-70 region 3 LFT46_02015 PF04542 Sigma-70 region 2 LFT46_02025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFT46_02035 PF13439 Glycosyltransferase Family 4 LFT46_02035 PF00534 Glycosyl transferases group 1 LFT46_02040 PF13580 SIS domain LFT46_02045 PF00294 pfkB family carbohydrate kinase LFT46_02045 PF01467 Cytidylyltransferase-like LFT46_02055 PF00171 Aldehyde dehydrogenase family LFT46_02060 PF01467 Cytidylyltransferase-like LFT46_02060 PF00294 pfkB family carbohydrate kinase LFT46_02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_02070 PF03466 LysR substrate binding domain LFT46_02075 PF00083 Sugar (and other) transporter LFT46_02090 PF01638 HxlR-like helix-turn-helix LFT46_02095 PF05368 NmrA-like family LFT46_02105 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_02110 PF00005 ABC transporter LFT46_02115 PF09339 IclR helix-turn-helix domain LFT46_02115 PF01614 Bacterial transcriptional regulator LFT46_02120 PF02515 CoA-transferase family III LFT46_02125 PF00682 HMGL-like LFT46_02130 PF00324 Amino acid permease LFT46_02140 PF01614 Bacterial transcriptional regulator LFT46_02140 PF09339 IclR helix-turn-helix domain LFT46_02145 PF17391 Urocanase N-terminal domain LFT46_02145 PF17392 Urocanase C-terminal domain LFT46_02145 PF01175 Urocanase Rossmann-like domain LFT46_02150 PF00221 Aromatic amino acid lyase LFT46_02165 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT46_02170 PF00582 Universal stress protein family LFT46_02175 PF01970 Tripartite tricarboxylate transporter TctA family LFT46_02190 PF17203 Single cache domain 3 LFT46_02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_02190 PF00989 PAS fold LFT46_02190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFT46_02195 PF00072 Response regulator receiver domain LFT46_02195 PF08279 HTH domain LFT46_02200 PF00491 Arginase family LFT46_02205 PF03471 Transporter associated domain LFT46_02205 PF00999 Sodium/hydrogen exchanger family LFT46_02205 PF02080 TrkA-C domain LFT46_02210 PF00860 Permease family LFT46_02225 PF00582 Universal stress protein family LFT46_02230 PF00391 PEP-utilising enzyme, mobile domain LFT46_02230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT46_02240 PF00005 ABC transporter LFT46_02250 PF00877 NlpC/P60 family LFT46_02255 PF01545 Cation efflux family LFT46_02275 PF02811 PHP domain LFT46_02275 PF14716 Helix-hairpin-helix domain LFT46_02275 PF14791 DNA polymerase beta thumb LFT46_02325 PF01547 Bacterial extracellular solute-binding protein LFT46_02330 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_02335 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_02345 PF00356 Bacterial regulatory proteins, lacI family LFT46_02365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_02365 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT46_02370 PF00378 Enoyl-CoA hydratase/isomerase LFT46_02375 PF09335 SNARE associated Golgi protein LFT46_02380 PF00106 short chain dehydrogenase LFT46_02390 PF00313 'Cold-shock' DNA-binding domain LFT46_02395 PF00196 Bacterial regulatory proteins, luxR family LFT46_02395 PF00072 Response regulator receiver domain LFT46_02410 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFT46_02410 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFT46_02415 PF01144 Coenzyme A transferase LFT46_02420 PF02667 Short chain fatty acid transporter LFT46_02425 PF01144 Coenzyme A transferase LFT46_02435 PF02540 NAD synthase LFT46_02445 PF00156 Phosphoribosyl transferase domain LFT46_02465 PF13344 Haloacid dehalogenase-like hydrolase LFT46_02470 PF00588 SpoU rRNA Methylase family LFT46_02470 PF02527 rRNA small subunit methyltransferase G LFT46_02480 PF01116 Fructose-bisphosphate aldolase class-II LFT46_02510 PF00709 Adenylosuccinate synthetase LFT46_02520 PF04542 Sigma-70 region 2 LFT46_02520 PF08281 Sigma-70, region 4 LFT46_02530 PF13380 CoA binding domain LFT46_02535 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT46_02540 PF00296 Luciferase-like monooxygenase LFT46_02545 PF13193 AMP-binding enzyme C-terminal domain LFT46_02545 PF00501 AMP-binding enzyme LFT46_02545 PF16177 Acetyl-coenzyme A synthetase N-terminus LFT46_02550 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_02560 PF00005 ABC transporter LFT46_02565 PF13380 CoA binding domain LFT46_02575 PF04237 YjbR LFT46_02600 PF00586 AIR synthase related protein, N-terminal domain LFT46_02600 PF02769 AIR synthase related protein, C-terminal domain LFT46_02600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LFT46_02620 PF13860 FlgD Ig-like domain LFT46_02620 PF05922 Peptidase inhibitor I9 LFT46_02620 PF02225 PA domain LFT46_02620 PF00082 Subtilase family LFT46_02640 PF01047 MarR family LFT46_02655 PF01842 ACT domain LFT46_02655 PF00696 Amino acid kinase family LFT46_02655 PF13840 ACT domain LFT46_02660 PF02132 RecR protein LFT46_02660 PF13662 Toprim domain LFT46_02665 PF12169 DNA polymerase III subunits gamma and tau domain III LFT46_02675 PF01784 NIF3 (NGG1p interacting factor 3) LFT46_02690 PF01551 Peptidase family M23 LFT46_02690 PF10145 Phage-related minor tail protein LFT46_02690 PF01464 Transglycosylase SLT domain LFT46_02695 PF00255 Glutathione peroxidase LFT46_02700 PF00149 Calcineurin-like phosphoesterase LFT46_02705 PF17102 Stealth protein CR3, conserved region 3 LFT46_02705 PF17103 Stealth protein CR4, conserved region 4 LFT46_02705 PF11380 Stealth protein CR2, conserved region 2 LFT46_02705 PF17101 Stealth protein CR1, conserved region 1 LFT46_02725 PF00440 Bacterial regulatory proteins, tetR family LFT46_02725 PF13977 BetI-type transcriptional repressor, C-terminal LFT46_02735 PF13439 Glycosyltransferase Family 4 LFT46_02745 PF00583 Acetyltransferase (GNAT) family LFT46_02750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT46_02750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT46_02750 PF01842 ACT domain LFT46_02760 PF01274 Malate synthase LFT46_02765 PF00463 Isocitrate lyase family LFT46_02770 PF01381 Helix-turn-helix LFT46_02780 PF00512 His Kinase A (phospho-acceptor) domain LFT46_02780 PF08521 Two-component sensor kinase N-terminal LFT46_02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_02785 PF00486 Transcriptional regulatory protein, C terminal LFT46_02785 PF00072 Response regulator receiver domain LFT46_02790 PF00083 Sugar (and other) transporter LFT46_02795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_02795 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_02795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_02800 PF08543 Phosphomethylpyrimidine kinase LFT46_02805 PF08338 Domain of unknown function (DUF1731) LFT46_02805 PF01370 NAD dependent epimerase/dehydratase family LFT46_02810 PF00440 Bacterial regulatory proteins, tetR family LFT46_02830 PF01702 Queuine tRNA-ribosyltransferase LFT46_02865 PF00106 short chain dehydrogenase LFT46_02870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_02870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_02870 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_02890 PF00311 Phosphoenolpyruvate carboxylase LFT46_02900 PF09335 SNARE associated Golgi protein LFT46_02905 PF01661 Macro domain LFT46_02910 PF00849 RNA pseudouridylate synthase LFT46_02915 PF00155 Aminotransferase class I and II LFT46_02915 PF00392 Bacterial regulatory proteins, gntR family LFT46_02925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT46_02925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFT46_02930 PF00270 DEAD/DEAH box helicase LFT46_02930 PF08494 DEAD/H associated LFT46_02930 PF00271 Helicase conserved C-terminal domain LFT46_02935 PF00355 Rieske [2Fe-2S] domain LFT46_02970 PF00356 Bacterial regulatory proteins, lacI family LFT46_02980 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_02985 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_02995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_02995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_03005 PF02614 Glucuronate isomerase LFT46_03010 PF01232 Mannitol dehydrogenase Rossmann domain LFT46_03010 PF08125 Mannitol dehydrogenase C-terminal domain LFT46_03015 PF13378 Enolase C-terminal domain-like LFT46_03015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_03020 PF00933 Glycosyl hydrolase family 3 N terminal domain LFT46_03055 PF00561 alpha/beta hydrolase fold LFT46_03090 PF14437 MafB19-like deaminase LFT46_03095 PF01569 PAP2 superfamily LFT46_03115 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LFT46_03120 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LFT46_03130 PF00512 His Kinase A (phospho-acceptor) domain LFT46_03130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_03130 PF00672 HAMP domain LFT46_03135 PF00072 Response regulator receiver domain LFT46_03135 PF00486 Transcriptional regulatory protein, C terminal LFT46_03145 PF00072 Response regulator receiver domain LFT46_03145 PF00486 Transcriptional regulatory protein, C terminal LFT46_03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_03155 PF03466 LysR substrate binding domain LFT46_03160 PF00892 EamA-like transporter family LFT46_03165 PF08361 MAATS-type transcriptional repressor, C-terminal region LFT46_03165 PF00440 Bacterial regulatory proteins, tetR family LFT46_03180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFT46_03180 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_03180 PF00403 Heavy-metal-associated domain LFT46_03190 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LFT46_03190 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LFT46_03195 PF00042 Globin LFT46_03195 PF00175 Oxidoreductase NAD-binding domain LFT46_03195 PF00970 Oxidoreductase FAD-binding domain LFT46_03200 PF02082 Transcriptional regulator LFT46_03210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFT46_03210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFT46_03210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFT46_03210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFT46_03215 PF00270 DEAD/DEAH box helicase LFT46_03215 PF00570 HRDC domain LFT46_03215 PF16124 RecQ zinc-binding LFT46_03215 PF09382 RQC domain LFT46_03215 PF00271 Helicase conserved C-terminal domain LFT46_03220 PF07690 Major Facilitator Superfamily LFT46_03235 PF00326 Prolyl oligopeptidase family LFT46_03235 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LFT46_03245 PF02872 5'-nucleotidase, C-terminal domain LFT46_03245 PF00149 Calcineurin-like phosphoesterase LFT46_03255 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_03255 PF16197 Ketoacyl-synthetase C-terminal extension LFT46_03255 PF00109 Beta-ketoacyl synthase, N-terminal domain LFT46_03255 PF02801 Beta-ketoacyl synthase, C-terminal domain LFT46_03255 PF08659 KR domain LFT46_03255 PF00550 Phosphopantetheine attachment site LFT46_03255 PF14765 Polyketide synthase dehydratase LFT46_03255 PF00698 Acyl transferase domain LFT46_03265 PF02687 FtsX-like permease family LFT46_03265 PF00005 ABC transporter LFT46_03265 PF12704 MacB-like periplasmic core domain LFT46_03275 PF02554 Carbon starvation protein CstA LFT46_03275 PF13722 5TM C-terminal transporter carbon starvation CstA LFT46_03285 PF10759 Protein of unknown function (DUF2587) LFT46_03295 PF00248 Aldo/keto reductase family LFT46_03305 PF03009 Glycerophosphoryl diester phosphodiesterase family LFT46_03330 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_03355 PF00561 alpha/beta hydrolase fold LFT46_03360 PF12169 DNA polymerase III subunits gamma and tau domain III LFT46_03365 PF02223 Thymidylate kinase LFT46_03370 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT46_03385 PF00300 Histidine phosphatase superfamily (branch 1) LFT46_03390 PF01895 PhoU domain LFT46_03395 PF00512 His Kinase A (phospho-acceptor) domain LFT46_03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_03400 PF00486 Transcriptional regulatory protein, C terminal LFT46_03400 PF00072 Response regulator receiver domain LFT46_03410 PF02559 CarD-like/TRCF domain LFT46_03415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LFT46_03415 PF02542 YgbB family LFT46_03420 PF02542 YgbB family LFT46_03425 PF09190 DALR domain LFT46_03425 PF01406 tRNA synthetases class I (C) catalytic domain LFT46_03430 PF00588 SpoU rRNA Methylase family LFT46_03430 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFT46_03435 PF00128 Alpha amylase, catalytic domain LFT46_03435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFT46_03440 PF00545 ribonuclease LFT46_03450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_03450 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_03450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_03455 PF11897 Protein of unknown function (DUF3417) LFT46_03455 PF00343 Carbohydrate phosphorylase LFT46_03460 PF11896 Domain of unknown function (DUF3416) LFT46_03465 PF16657 Maltogenic Amylase, C-terminal domain LFT46_03465 PF00128 Alpha amylase, catalytic domain LFT46_03470 PF00128 Alpha amylase, catalytic domain LFT46_03470 PF02806 Alpha amylase, C-terminal all-beta domain LFT46_03470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFT46_03495 PF00356 Bacterial regulatory proteins, lacI family LFT46_03500 PF00128 Alpha amylase, catalytic domain LFT46_03505 PF02913 FAD linked oxidases, C-terminal domain LFT46_03505 PF01565 FAD binding domain LFT46_03510 PF00665 Integrase core domain LFT46_03520 PF00005 ABC transporter LFT46_03520 PF17912 MalK OB fold domain LFT46_03530 PF00982 Glycosyltransferase family 20 LFT46_03545 PF14659 Phage integrase, N-terminal SAM-like domain LFT46_03545 PF00589 Phage integrase family LFT46_03555 PF17841 BID domain of Bartonella effector protein (Bep) LFT46_03555 PF03389 MobA/MobL family LFT46_03555 PF01443 Viral (Superfamily 1) RNA helicase LFT46_03575 PF03793 PASTA domain LFT46_03575 PF00069 Protein kinase domain LFT46_03595 PF00391 PEP-utilising enzyme, mobile domain LFT46_03595 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT46_03620 PF04542 Sigma-70 region 2 LFT46_03620 PF08281 Sigma-70, region 4 LFT46_03635 PF00239 Resolvase, N terminal domain LFT46_03635 PF02796 Helix-turn-helix domain of resolvase LFT46_03640 PF09299 Mu transposase, C-terminal LFT46_03640 PF00665 Integrase core domain LFT46_03645 PF13401 AAA domain LFT46_03650 PF00465 Iron-containing alcohol dehydrogenase LFT46_03655 PF12706 Beta-lactamase superfamily domain LFT46_03660 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LFT46_03660 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LFT46_03665 PF01613 Flavin reductase like domain LFT46_03670 PF00775 Dioxygenase LFT46_03670 PF04444 Catechol dioxygenase N terminus LFT46_03675 PF02426 Muconolactone delta-isomerase LFT46_03680 PF13378 Enolase C-terminal domain-like LFT46_03680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_03685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_03685 PF03466 LysR substrate binding domain LFT46_03690 PF02796 Helix-turn-helix domain of resolvase LFT46_03690 PF00239 Resolvase, N terminal domain LFT46_03720 PF00005 ABC transporter LFT46_03730 PF00239 Resolvase, N terminal domain LFT46_03730 PF02796 Helix-turn-helix domain of resolvase LFT46_03745 PF00665 Integrase core domain LFT46_03745 PF13936 Helix-turn-helix domain LFT46_03755 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT46_03760 PF02615 Malate/L-lactate dehydrogenase LFT46_03765 PF07690 Major Facilitator Superfamily LFT46_03770 PF00171 Aldehyde dehydrogenase family LFT46_03775 PF00465 Iron-containing alcohol dehydrogenase LFT46_03780 PF00392 Bacterial regulatory proteins, gntR family LFT46_03780 PF07729 FCD domain LFT46_03785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT46_03785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT46_03785 PF01842 ACT domain LFT46_03795 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_03795 PF14759 Reductase C-terminal LFT46_03800 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT46_03805 PF02126 Phosphotriesterase family LFT46_03810 PF03328 HpcH/HpaI aldolase/citrate lyase family LFT46_03825 PF01070 FMN-dependent dehydrogenase LFT46_03835 PF00083 Sugar (and other) transporter LFT46_03835 PF07690 Major Facilitator Superfamily LFT46_03840 PF01613 Flavin reductase like domain LFT46_03845 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT46_03870 PF00679 Elongation factor G C-terminus LFT46_03870 PF14492 Elongation Factor G, domain II LFT46_03870 PF00009 Elongation factor Tu GTP binding domain LFT46_03870 PF03144 Elongation factor Tu domain 2 LFT46_03870 PF03764 Elongation factor G, domain IV LFT46_03880 PF02653 Branched-chain amino acid transport system / permease component LFT46_03885 PF00005 ABC transporter LFT46_03890 PF13407 Periplasmic binding protein domain LFT46_03895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT46_03895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT46_03900 PF00596 Class II Aldolase and Adducin N-terminal domain LFT46_03905 PF11762 L-arabinose isomerase C-terminal domain LFT46_03905 PF02610 L-arabinose isomerase LFT46_03910 PF00356 Bacterial regulatory proteins, lacI family LFT46_03930 PF13520 Amino acid permease LFT46_03935 PF00210 Ferritin-like domain LFT46_03940 PF07690 Major Facilitator Superfamily LFT46_03945 PF00440 Bacterial regulatory proteins, tetR family LFT46_03950 PF02347 Glycine cleavage system P-protein LFT46_03955 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT46_03955 PF01571 Aminomethyltransferase folate-binding domain LFT46_03960 PF03313 Serine dehydratase alpha chain LFT46_03960 PF03315 Serine dehydratase beta chain LFT46_03985 PF08021 Siderophore-interacting FAD-binding domain LFT46_03985 PF04954 Siderophore-interacting protein LFT46_03990 PF03167 Uracil DNA glycosylase superfamily LFT46_04005 PF00313 'Cold-shock' DNA-binding domain LFT46_04015 PF00118 TCP-1/cpn60 chaperonin family LFT46_04020 PF13416 Bacterial extracellular solute-binding protein LFT46_04025 PF00075 RNase H LFT46_04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_04035 PF00512 His Kinase A (phospho-acceptor) domain LFT46_04035 PF00672 HAMP domain LFT46_04040 PF00072 Response regulator receiver domain LFT46_04040 PF00486 Transcriptional regulatory protein, C terminal LFT46_04060 PF00271 Helicase conserved C-terminal domain LFT46_04060 PF04851 Type III restriction enzyme, res subunit LFT46_04075 PF00313 'Cold-shock' DNA-binding domain LFT46_04080 PF11228 Protein of unknown function (DUF3027) LFT46_04085 PF00266 Aminotransferase class-V LFT46_04090 PF02742 Iron dependent repressor, metal binding and dimerisation domain LFT46_04090 PF01325 Iron dependent repressor, N-terminal DNA binding domain LFT46_04090 PF18357 Diphteria toxin repressor SH3 domain LFT46_04095 PF04225 Opacity-associated protein A LysM-like domain LFT46_04095 PF01551 Peptidase family M23 LFT46_04100 PF08239 Bacterial SH3 domain LFT46_04100 PF00877 NlpC/P60 family LFT46_04100 PF01476 LysM domain LFT46_04115 PF12804 MobA-like NTP transferase domain LFT46_04130 PF02634 FdhD/NarQ family LFT46_04150 PF00005 ABC transporter LFT46_04150 PF12848 ABC transporter LFT46_04155 PF00664 ABC transporter transmembrane region LFT46_04155 PF00005 ABC transporter LFT46_04160 PF00293 NUDIX domain LFT46_04185 PF00459 Inositol monophosphatase family LFT46_04190 PF00665 Integrase core domain LFT46_04200 PF00580 UvrD/REP helicase N-terminal domain LFT46_04200 PF13361 UvrD-like helicase C-terminal domain LFT46_04215 PF02525 Flavodoxin-like fold LFT46_04220 PF00665 Integrase core domain LFT46_04230 PF00549 CoA-ligase LFT46_04230 PF08442 ATP-grasp domain LFT46_04235 PF00549 CoA-ligase LFT46_04235 PF02629 CoA binding domain LFT46_04245 PF07690 Major Facilitator Superfamily LFT46_04260 PF01261 Xylose isomerase-like TIM barrel LFT46_04265 PF02733 Dak1 domain LFT46_04265 PF02734 DAK2 domain LFT46_04270 PF02502 Ribose/Galactose Isomerase LFT46_04275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFT46_04275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFT46_04285 PF07690 Major Facilitator Superfamily LFT46_04290 PF00121 Triosephosphate isomerase LFT46_04305 PF00294 pfkB family carbohydrate kinase LFT46_04315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_04315 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_04315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_04320 PF00171 Aldehyde dehydrogenase family LFT46_04325 PF01261 Xylose isomerase-like TIM barrel LFT46_04330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_04330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_04335 PF00083 Sugar (and other) transporter LFT46_04340 PF01047 MarR family LFT46_04345 PF07690 Major Facilitator Superfamily LFT46_04350 PF04962 KduI/IolB family LFT46_04355 PF07702 UTRA domain LFT46_04355 PF00392 Bacterial regulatory proteins, gntR family LFT46_04375 PF00474 Sodium:solute symporter family LFT46_04380 PF01381 Helix-turn-helix LFT46_04380 PF07883 Cupin domain LFT46_04390 PF00491 Arginase family LFT46_04395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_04395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_04395 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_04405 PF07690 Major Facilitator Superfamily LFT46_04410 PF00664 ABC transporter transmembrane region LFT46_04410 PF00005 ABC transporter LFT46_04415 PF00005 ABC transporter LFT46_04415 PF00664 ABC transporter transmembrane region LFT46_04430 PF07728 AAA domain (dynein-related subfamily) LFT46_04430 PF12102 Domain of unknown function (DUF3578) LFT46_04440 PF00512 His Kinase A (phospho-acceptor) domain LFT46_04440 PF00989 PAS fold LFT46_04440 PF16736 Single Cache-like LFT46_04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_04445 PF00072 Response regulator receiver domain LFT46_04445 PF00486 Transcriptional regulatory protein, C terminal LFT46_04455 PF02156 Glycosyl hydrolase family 26 LFT46_04455 PF03425 Carbohydrate binding domain (family 11) LFT46_04455 PF00150 Cellulase (glycosyl hydrolase family 5) LFT46_04455 PF00404 Dockerin type I domain LFT46_04460 PF03852 DNA mismatch endonuclease Vsr LFT46_04485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFT46_04495 PF17674 HHH domain LFT46_04495 PF00575 S1 RNA binding domain LFT46_04495 PF09371 Tex-like protein N-terminal domain LFT46_04495 PF16921 Tex protein YqgF-like domain LFT46_04525 PF01370 NAD dependent epimerase/dehydratase family LFT46_04540 PF06737 Transglycosylase-like domain LFT46_04540 PF07501 G5 domain LFT46_04540 PF03990 G5-linked-Ubiquitin-like domain LFT46_04545 PF00962 Adenosine/AMP deaminase LFT46_04550 PF00128 Alpha amylase, catalytic domain LFT46_04550 PF02903 Alpha amylase, N-terminal ig-like domain LFT46_04555 PF00708 Acylphosphatase LFT46_04565 PF03741 Integral membrane protein TerC family LFT46_04570 PF09382 RQC domain LFT46_04570 PF00271 Helicase conserved C-terminal domain LFT46_04570 PF00270 DEAD/DEAH box helicase LFT46_04570 PF00570 HRDC domain LFT46_04570 PF16124 RecQ zinc-binding LFT46_04575 PF00248 Aldo/keto reductase family LFT46_04580 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_04580 PF00107 Zinc-binding dehydrogenase LFT46_04595 PF07690 Major Facilitator Superfamily LFT46_04600 PF01738 Dienelactone hydrolase family LFT46_04610 PF00571 CBS domain LFT46_04610 PF03471 Transporter associated domain LFT46_04610 PF01595 Cyclin M transmembrane N-terminal domain LFT46_04620 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT46_04625 PF00248 Aldo/keto reductase family LFT46_04640 PF13378 Enolase C-terminal domain-like LFT46_04640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_04645 PF00392 Bacterial regulatory proteins, gntR family LFT46_04645 PF07729 FCD domain LFT46_04685 PF07690 Major Facilitator Superfamily LFT46_04700 PF00171 Aldehyde dehydrogenase family LFT46_04705 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_04710 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_04720 PF01791 DeoC/LacD family aldolase LFT46_04730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_04730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_04735 PF00455 DeoR C terminal sensor domain LFT46_04735 PF08220 DeoR-like helix-turn-helix domain LFT46_04740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT46_04770 PF05977 Transmembrane secretion effector LFT46_04775 PF01047 MarR family LFT46_04825 PF03746 LamB/YcsF family LFT46_04830 PF02626 Carboxyltransferase domain, subdomain A and B LFT46_04835 PF02785 Biotin carboxylase C-terminal domain LFT46_04835 PF00289 Biotin carboxylase, N-terminal domain LFT46_04835 PF00364 Biotin-requiring enzyme LFT46_04835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT46_04885 PF01565 FAD binding domain LFT46_04885 PF02913 FAD linked oxidases, C-terminal domain LFT46_04890 PF00392 Bacterial regulatory proteins, gntR family LFT46_04890 PF07729 FCD domain LFT46_04895 PF02652 L-lactate permease LFT46_04900 PF02754 Cysteine-rich domain LFT46_04905 PF02589 LUD domain LFT46_04905 PF11870 Domain of unknown function (DUF3390) LFT46_04905 PF13183 4Fe-4S dicluster domain LFT46_04910 PF02589 LUD domain LFT46_04915 PF03618 Kinase/pyrophosphorylase LFT46_04920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT46_04920 PF02896 PEP-utilising enzyme, TIM barrel domain LFT46_04920 PF00391 PEP-utilising enzyme, mobile domain LFT46_04955 PF00890 FAD binding domain LFT46_04960 PF01145 SPFH domain / Band 7 family LFT46_04975 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFT46_04975 PF10531 SLBB domain LFT46_04975 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFT46_04980 PF01568 Molydopterin dinucleotide binding domain LFT46_04980 PF12838 4Fe-4S dicluster domain LFT46_04980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFT46_04980 PF00384 Molybdopterin oxidoreductase LFT46_04980 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LFT46_04990 PF00501 AMP-binding enzyme LFT46_05005 PF03741 Integral membrane protein TerC family LFT46_05045 PF06736 Protein of unknown function (DUF1211) LFT46_05060 PF00391 PEP-utilising enzyme, mobile domain LFT46_05060 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT46_05085 PF00391 PEP-utilising enzyme, mobile domain LFT46_05085 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT46_05120 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_05120 PF14765 Polyketide synthase dehydratase LFT46_05120 PF00550 Phosphopantetheine attachment site LFT46_05120 PF08659 KR domain LFT46_05120 PF00107 Zinc-binding dehydrogenase LFT46_05120 PF16197 Ketoacyl-synthetase C-terminal extension LFT46_05120 PF00698 Acyl transferase domain LFT46_05120 PF02801 Beta-ketoacyl synthase, C-terminal domain LFT46_05120 PF00109 Beta-ketoacyl synthase, N-terminal domain LFT46_05180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_05180 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_05180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_05195 PF00155 Aminotransferase class I and II LFT46_05200 PF00324 Amino acid permease LFT46_05215 PF00795 Carbon-nitrogen hydrolase LFT46_05220 PF00324 Amino acid permease LFT46_05225 PF00795 Carbon-nitrogen hydrolase LFT46_05250 PF00324 Amino acid permease LFT46_05280 PF01695 IstB-like ATP binding protein LFT46_05290 PF00271 Helicase conserved C-terminal domain LFT46_05290 PF08494 DEAD/H associated LFT46_05290 PF00270 DEAD/DEAH box helicase LFT46_05305 PF00665 Integrase core domain LFT46_05320 PF01695 IstB-like ATP binding protein LFT46_05325 PF00665 Integrase core domain LFT46_05385 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_05385 PF00107 Zinc-binding dehydrogenase LFT46_05405 PF11855 Protein of unknown function (DUF3375) LFT46_05415 PF08241 Methyltransferase domain LFT46_05425 PF01323 DSBA-like thioredoxin domain LFT46_05430 PF03928 Haem-degrading LFT46_05435 PF01116 Fructose-bisphosphate aldolase class-II LFT46_05440 PF13419 Haloacid dehalogenase-like hydrolase LFT46_05445 PF02734 DAK2 domain LFT46_05450 PF02733 Dak1 domain LFT46_05455 PF00365 Phosphofructokinase LFT46_05460 PF07730 Histidine kinase LFT46_05470 PF00107 Zinc-binding dehydrogenase LFT46_05470 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_05485 PF02954 Bacterial regulatory protein, Fis family LFT46_05485 PF01590 GAF domain LFT46_05495 PF01613 Flavin reductase like domain LFT46_05505 PF17645 Arylmalonate decarboxylase LFT46_05515 PF07729 FCD domain LFT46_05515 PF00392 Bacterial regulatory proteins, gntR family LFT46_05520 PF00356 Bacterial regulatory proteins, lacI family LFT46_05535 PF00005 ABC transporter LFT46_05540 PF02653 Branched-chain amino acid transport system / permease component LFT46_05545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_05545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_05550 PF01261 Xylose isomerase-like TIM barrel LFT46_05555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_05555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_05565 PF08241 Methyltransferase domain LFT46_05585 PF03795 YCII-related domain LFT46_05590 PF00455 DeoR C terminal sensor domain LFT46_05590 PF08220 DeoR-like helix-turn-helix domain LFT46_05595 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LFT46_05600 PF17042 Nucleotide-binding C-terminal domain LFT46_05600 PF07005 Sugar-binding N-terminal domain LFT46_05605 PF03812 2-keto-3-deoxygluconate permease LFT46_05610 PF06912 Protein of unknown function (DUF1275) LFT46_05615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT46_05620 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_05625 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT46_05625 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_05635 PF00005 ABC transporter LFT46_05635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT46_05640 PF00392 Bacterial regulatory proteins, gntR family LFT46_05640 PF07729 FCD domain LFT46_05645 PF00561 alpha/beta hydrolase fold LFT46_05650 PF00082 Subtilase family LFT46_05675 PF00082 Subtilase family LFT46_05685 PF09423 PhoD-like phosphatase LFT46_05685 PF16655 PhoD-like phosphatase, N-terminal domain LFT46_05700 PF00743 Flavin-binding monooxygenase-like LFT46_05705 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_05705 PF00107 Zinc-binding dehydrogenase LFT46_05720 PF08241 Methyltransferase domain LFT46_05725 PF00689 Cation transporting ATPase, C-terminus LFT46_05725 PF00690 Cation transporter/ATPase, N-terminus LFT46_05730 PF07730 Histidine kinase LFT46_05730 PF13492 GAF domain LFT46_05730 PF13185 GAF domain LFT46_05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_05735 PF00072 Response regulator receiver domain LFT46_05735 PF00196 Bacterial regulatory proteins, luxR family LFT46_05755 PF03595 Voltage-dependent anion channel LFT46_05775 PF01566 Natural resistance-associated macrophage protein LFT46_05790 PF00313 'Cold-shock' DNA-binding domain LFT46_05795 PF00127 Copper binding proteins, plastocyanin/azurin family LFT46_05810 PF02447 GntP family permease LFT46_05815 PF00106 short chain dehydrogenase LFT46_05835 PF00155 Aminotransferase class I and II LFT46_05835 PF00392 Bacterial regulatory proteins, gntR family LFT46_05850 PF05958 tRNA (Uracil-5-)-methyltransferase LFT46_05860 PF00665 Integrase core domain LFT46_05865 PF01872 RibD C-terminal domain LFT46_05875 PF00563 EAL domain LFT46_05875 PF00990 Diguanylate cyclase, GGDEF domain LFT46_05875 PF03707 Bacterial signalling protein N terminal repeat LFT46_05875 PF13188 PAS domain LFT46_05880 PF04226 Transglycosylase associated protein LFT46_05890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFT46_05890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFT46_05890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFT46_05895 PF00534 Glycosyl transferases group 1 LFT46_05895 PF13439 Glycosyltransferase Family 4 LFT46_05900 PF09557 Domain of unknown function (DUF2382) LFT46_05900 PF05239 PRC-barrel domain LFT46_05915 PF00551 Formyl transferase LFT46_05930 PF07690 Major Facilitator Superfamily LFT46_05935 PF01808 AICARFT/IMPCHase bienzyme LFT46_05935 PF02142 MGS-like domain LFT46_05950 PF03971 Monomeric isocitrate dehydrogenase LFT46_05960 PF03793 PASTA domain LFT46_05960 PF00069 Protein kinase domain LFT46_05975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_05980 PF00005 ABC transporter LFT46_06000 PF13936 Helix-turn-helix domain LFT46_06000 PF00665 Integrase core domain LFT46_06005 PF00665 Integrase core domain LFT46_06005 PF13276 HTH-like domain LFT46_06005 PF13333 Integrase core domain LFT46_06015 PF13407 Periplasmic binding protein domain LFT46_06020 PF02653 Branched-chain amino acid transport system / permease component LFT46_06025 PF00005 ABC transporter LFT46_06030 PF01047 MarR family LFT46_06030 PF00480 ROK family LFT46_06035 PF00795 Carbon-nitrogen hydrolase LFT46_06045 PF00842 Alanine racemase, C-terminal domain LFT46_06045 PF01168 Alanine racemase, N-terminal domain LFT46_06050 PF13520 Amino acid permease LFT46_06055 PF01593 Flavin containing amine oxidoreductase LFT46_06055 PF02027 RolB/RolC glucosidase family LFT46_06060 PF00132 Bacterial transferase hexapeptide (six repeats) LFT46_06065 PF00551 Formyl transferase LFT46_06070 PF00464 Serine hydroxymethyltransferase LFT46_06075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LFT46_06075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LFT46_06080 PF00005 ABC transporter LFT46_06100 PF03372 Endonuclease/Exonuclease/phosphatase family LFT46_06105 PF00579 tRNA synthetases class I (W and Y) LFT46_06135 PF13085 2Fe-2S iron-sulfur cluster binding domain LFT46_06140 PF00890 FAD binding domain LFT46_06140 PF02910 Fumarate reductase flavoprotein C-term LFT46_06150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LFT46_06155 PF01050 Mannose-6-phosphate isomerase LFT46_06155 PF00483 Nucleotidyl transferase LFT46_06160 PF01546 Peptidase family M20/M25/M40 LFT46_06160 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFT46_06165 PF01047 MarR family LFT46_06170 PF02566 OsmC-like protein LFT46_06175 PF00107 Zinc-binding dehydrogenase LFT46_06175 PF16884 N-terminal domain of oxidoreductase LFT46_06180 PF02608 ABC transporter substrate-binding protein PnrA-like LFT46_06185 PF00005 ABC transporter LFT46_06190 PF02653 Branched-chain amino acid transport system / permease component LFT46_06195 PF02653 Branched-chain amino acid transport system / permease component LFT46_06200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFT46_06205 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LFT46_06205 PF00591 Glycosyl transferase family, a/b domain LFT46_06205 PF02885 Glycosyl transferase family, helical bundle domain LFT46_06210 PF09335 SNARE associated Golgi protein LFT46_06215 PF09335 SNARE associated Golgi protein LFT46_06220 PF00962 Adenosine/AMP deaminase LFT46_06225 PF03819 MazG nucleotide pyrophosphohydrolase domain LFT46_06230 PF00113 Enolase, C-terminal TIM barrel domain LFT46_06230 PF03952 Enolase, N-terminal domain LFT46_06245 PF02541 Ppx/GppA phosphatase family LFT46_06250 PF00082 Subtilase family LFT46_06255 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_06265 PF13458 Periplasmic binding protein LFT46_06270 PF02653 Branched-chain amino acid transport system / permease component LFT46_06275 PF11862 Domain of unknown function (DUF3382) LFT46_06275 PF02653 Branched-chain amino acid transport system / permease component LFT46_06280 PF00005 ABC transporter LFT46_06280 PF12399 Branched-chain amino acid ATP-binding cassette transporter LFT46_06285 PF00005 ABC transporter LFT46_06295 PF10509 Galactokinase galactose-binding signature LFT46_06295 PF08544 GHMP kinases C terminal LFT46_06295 PF00288 GHMP kinases N terminal domain LFT46_06300 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LFT46_06300 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LFT46_06305 PF01263 Aldose 1-epimerase LFT46_06310 PF01594 AI-2E family transporter LFT46_06315 PF00291 Pyridoxal-phosphate dependent enzyme LFT46_06315 PF13291 ACT domain LFT46_06320 PF01694 Rhomboid family LFT46_06325 PF01272 Transcription elongation factor, GreA/GreB, C-term LFT46_06325 PF03449 Transcription elongation factor, N-terminal LFT46_06335 PF02585 GlcNAc-PI de-N-acetylase LFT46_06345 PF03006 Haemolysin-III related LFT46_06350 PF01255 Putative undecaprenyl diphosphate synthase LFT46_06355 PF13638 PIN domain LFT46_06355 PF02562 PhoH-like protein LFT46_06360 PF13302 Acetyltransferase (GNAT) domain LFT46_06380 PF10415 Fumarase C C-terminus LFT46_06380 PF00206 Lyase LFT46_06385 PF00484 Carbonic anhydrase LFT46_06395 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LFT46_06405 PF13936 Helix-turn-helix domain LFT46_06405 PF00665 Integrase core domain LFT46_06410 PF01238 Phosphomannose isomerase type I LFT46_06415 PF03816 Cell envelope-related transcriptional attenuator domain LFT46_06420 PF00731 AIR carboxylase LFT46_06425 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LFT46_06425 PF02222 ATP-grasp domain LFT46_06440 PF02467 Transcription factor WhiB LFT46_06445 PF00534 Glycosyl transferases group 1 LFT46_06445 PF00535 Glycosyl transferase family 2 LFT46_06470 PF05221 S-adenosyl-L-homocysteine hydrolase LFT46_06470 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LFT46_06475 PF17964 Bacterial Ig domain LFT46_06475 PF03734 L,D-transpeptidase catalytic domain LFT46_06495 PF00501 AMP-binding enzyme LFT46_06500 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase LFT46_06500 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LFT46_06505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFT46_06510 PF00171 Aldehyde dehydrogenase family LFT46_06515 PF13559 Domain of unknown function (DUF4129) LFT46_06515 PF11992 Domain of unknown function (DUF3488) LFT46_06515 PF01841 Transglutaminase-like superfamily LFT46_06525 PF17863 AAA lid domain LFT46_06525 PF07726 ATPase family associated with various cellular activities (AAA) LFT46_06530 PF01026 TatD related DNase LFT46_06535 PF03990 G5-linked-Ubiquitin-like domain LFT46_06535 PF07501 G5 domain LFT46_06535 PF06737 Transglycosylase-like domain LFT46_06540 PF00398 Ribosomal RNA adenine dimethylase LFT46_06545 PF00288 GHMP kinases N terminal domain LFT46_06545 PF08544 GHMP kinases C terminal LFT46_06550 PF16326 ABC transporter C-terminal domain LFT46_06550 PF00005 ABC transporter LFT46_06550 PF12848 ABC transporter LFT46_06555 PF00440 Bacterial regulatory proteins, tetR family LFT46_06565 PF00132 Bacterial transferase hexapeptide (six repeats) LFT46_06565 PF12804 MobA-like NTP transferase domain LFT46_06570 PF14572 Phosphoribosyl synthetase-associated domain LFT46_06570 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LFT46_06575 PF14693 Ribosomal protein TL5, C-terminal domain LFT46_06575 PF01386 Ribosomal L25p family LFT46_06580 PF01195 Peptidyl-tRNA hydrolase LFT46_06590 PF00196 Bacterial regulatory proteins, luxR family LFT46_06590 PF00072 Response regulator receiver domain LFT46_06595 PF00266 Aminotransferase class-V LFT46_06600 PF01592 NifU-like N terminal domain LFT46_06615 PF11066 Protein of unknown function (DUF2867) LFT46_06615 PF13460 NAD(P)H-binding LFT46_06620 PF02559 CarD-like/TRCF domain LFT46_06620 PF00270 DEAD/DEAH box helicase LFT46_06620 PF17757 UvrB interaction domain LFT46_06620 PF03461 TRCF domain LFT46_06620 PF00271 Helicase conserved C-terminal domain LFT46_06625 PF04307 LexA-binding, inner membrane-associated putative hydrolase LFT46_06635 PF01791 DeoC/LacD family aldolase LFT46_06640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_06640 PF18113 Rubredoxin binding C-terminal domain LFT46_06650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFT46_06650 PF02602 Uroporphyrinogen-III synthase HemD LFT46_06655 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_06655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFT46_06655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFT46_06655 PF04324 BFD-like [2Fe-2S] binding domain LFT46_06655 PF13806 Rieske-like [2Fe-2S] domain LFT46_06655 PF18267 Rubredoxin NAD+ reductase C-terminal domain LFT46_06675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFT46_06675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFT46_06675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFT46_06675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFT46_06680 PF01048 Phosphorylase superfamily LFT46_06685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFT46_06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_06695 PF00171 Aldehyde dehydrogenase family LFT46_06700 PF14759 Reductase C-terminal LFT46_06700 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_06705 PF01568 Molydopterin dinucleotide binding domain LFT46_06705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFT46_06705 PF00384 Molybdopterin oxidoreductase LFT46_06710 PF07690 Major Facilitator Superfamily LFT46_06715 PF07690 Major Facilitator Superfamily LFT46_06715 PF00083 Sugar (and other) transporter LFT46_06730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT46_06730 PF02785 Biotin carboxylase C-terminal domain LFT46_06730 PF00364 Biotin-requiring enzyme LFT46_06730 PF00289 Biotin carboxylase, N-terminal domain LFT46_06735 PF02545 Maf-like protein LFT46_06740 PF03176 MMPL family LFT46_06745 PF17754 MftR C-terminal domain LFT46_06745 PF00440 Bacterial regulatory proteins, tetR family LFT46_06755 PF00375 Sodium:dicarboxylate symporter family LFT46_06770 PF01039 Carboxyl transferase domain LFT46_06775 PF00106 short chain dehydrogenase LFT46_06780 PF08279 HTH domain LFT46_06780 PF03099 Biotin/lipoate A/B protein ligase family LFT46_06780 PF02237 Biotin protein ligase C terminal domain LFT46_06790 PF00211 Adenylate and Guanylate cyclase catalytic domain LFT46_06790 PF16701 Adenylate cyclase regulatory domain LFT46_06805 PF07726 ATPase family associated with various cellular activities (AAA) LFT46_06805 PF17863 AAA lid domain LFT46_06835 PF13191 AAA ATPase domain LFT46_06835 PF00069 Protein kinase domain LFT46_06845 PF12538 DNA transporter LFT46_06845 PF01580 FtsK/SpoIIIE family LFT46_06855 PF12826 Helix-hairpin-helix motif LFT46_06855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LFT46_06855 PF03120 NAD-dependent DNA ligase OB-fold domain LFT46_06855 PF01653 NAD-dependent DNA ligase adenylation domain LFT46_06855 PF00533 BRCA1 C Terminus (BRCT) domain LFT46_06860 PF00459 Inositol monophosphatase family LFT46_06870 PF01042 Endoribonuclease L-PSP LFT46_06875 PF00665 Integrase core domain LFT46_06880 PF00072 Response regulator receiver domain LFT46_06885 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFT46_06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_06885 PF17203 Single cache domain 3 LFT46_06885 PF00989 PAS fold LFT46_06890 PF03600 Citrate transporter LFT46_06895 PF02686 Glu-tRNAGln amidotransferase C subunit LFT46_06900 PF01425 Amidase LFT46_06905 PF02934 GatB/GatE catalytic domain LFT46_06905 PF02637 GatB domain LFT46_06920 PF00107 Zinc-binding dehydrogenase LFT46_06920 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_06925 PF00155 Aminotransferase class I and II LFT46_06930 PF01266 FAD dependent oxidoreductase LFT46_06935 PF01979 Amidohydrolase family LFT46_06960 PF05922 Peptidase inhibitor I9 LFT46_06960 PF00082 Subtilase family LFT46_06965 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT46_06970 PF00561 alpha/beta hydrolase fold LFT46_06975 PF00083 Sugar (and other) transporter LFT46_06980 PF00107 Zinc-binding dehydrogenase LFT46_06980 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_06990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_06990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT46_06995 PF00171 Aldehyde dehydrogenase family LFT46_07010 PF01738 Dienelactone hydrolase family LFT46_07025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT46_07025 PF03129 Anticodon binding domain LFT46_07035 PF01553 Acyltransferase LFT46_07050 PF01207 Dihydrouridine synthase (Dus) LFT46_07055 PF01966 HD domain LFT46_07055 PF13286 Phosphohydrolase-associated domain LFT46_07065 PF02424 ApbE family LFT46_07075 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFT46_07075 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFT46_07075 PF10531 SLBB domain LFT46_07085 PF08275 DNA primase catalytic core, N-terminal domain LFT46_07085 PF01807 CHC2 zinc finger LFT46_07085 PF08278 DNA primase DnaG DnaB-binding LFT46_07085 PF10410 DnaB-helicase binding domain of primase LFT46_07085 PF13662 Toprim domain LFT46_07110 PF07690 Major Facilitator Superfamily LFT46_07120 PF01066 CDP-alcohol phosphatidyltransferase LFT46_07130 PF00534 Glycosyl transferases group 1 LFT46_07140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_07140 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_07140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_07145 PF01551 Peptidase family M23 LFT46_07150 PF00318 Ribosomal protein S2 LFT46_07155 PF00889 Elongation factor TS LFT46_07160 PF00696 Amino acid kinase family LFT46_07165 PF01765 Ribosome recycling factor LFT46_07185 PF00474 Sodium:solute symporter family LFT46_07195 PF00072 Response regulator receiver domain LFT46_07195 PF04397 LytTr DNA-binding domain LFT46_07200 PF06580 Histidine kinase LFT46_07200 PF07694 5TMR of 5TMR-LYT LFT46_07210 PF00474 Sodium:solute symporter family LFT46_07230 PF01037 Lrp/AsnC ligand binding domain LFT46_07235 PF00676 Dehydrogenase E1 component LFT46_07240 PF02780 Transketolase, C-terminal domain LFT46_07240 PF02779 Transketolase, pyrimidine binding domain LFT46_07245 PF02817 e3 binding domain LFT46_07245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT46_07245 PF00364 Biotin-requiring enzyme LFT46_07255 PF01039 Carboxyl transferase domain LFT46_07260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT46_07260 PF00364 Biotin-requiring enzyme LFT46_07260 PF00289 Biotin carboxylase, N-terminal domain LFT46_07260 PF02785 Biotin carboxylase C-terminal domain LFT46_07265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_07265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_07265 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_07270 PF01144 Coenzyme A transferase LFT46_07275 PF01144 Coenzyme A transferase LFT46_07285 PF03328 HpcH/HpaI aldolase/citrate lyase family LFT46_07295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LFT46_07295 PF13288 DXP reductoisomerase C-terminal domain LFT46_07295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LFT46_07300 PF02163 Peptidase family M50 LFT46_07300 PF17820 PDZ domain LFT46_07320 PF04551 GcpE protein LFT46_07335 PF04073 Aminoacyl-tRNA editing domain LFT46_07335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT46_07335 PF03129 Anticodon binding domain LFT46_07340 PF01925 Sulfite exporter TauE/SafE LFT46_07350 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LFT46_07365 PF02576 RimP N-terminal domain LFT46_07365 PF17384 RimP C-terminal SH3 domain LFT46_07370 PF13184 NusA-like KH domain LFT46_07370 PF08529 NusA N-terminal domain LFT46_07380 PF00009 Elongation factor Tu GTP binding domain LFT46_07380 PF11987 Translation-initiation factor 2 LFT46_07380 PF04760 Translation initiation factor IF-2, N-terminal region LFT46_07385 PF02033 Ribosome-binding factor A LFT46_07395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFT46_07400 PF00085 Thioredoxin LFT46_07405 PF00155 Aminotransferase class I and II LFT46_07410 PF09142 tRNA Pseudouridine synthase II, C terminal LFT46_07410 PF16198 tRNA pseudouridylate synthase B C-terminal domain LFT46_07410 PF01509 TruB family pseudouridylate synthase (N terminal domain) LFT46_07425 PF06574 FAD synthetase LFT46_07425 PF01687 Riboflavin kinase LFT46_07430 PF03301 Tryptophan 2,3-dioxygenase LFT46_07435 PF00266 Aminotransferase class-V LFT46_07440 PF00312 Ribosomal protein S15 LFT46_07445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LFT46_07445 PF01138 3' exoribonuclease family, domain 1 LFT46_07445 PF00575 S1 RNA binding domain LFT46_07445 PF00013 KH domain LFT46_07450 PF00675 Insulinase (Peptidase family M16) LFT46_07450 PF05193 Peptidase M16 inactive domain LFT46_07470 PF04055 Radical SAM superfamily LFT46_07470 PF06463 Molybdenum Cofactor Synthesis C LFT46_07480 PF03453 MoeA N-terminal region (domain I and II) LFT46_07480 PF03454 MoeA C-terminal region (domain IV) LFT46_07480 PF00994 Probable molybdopterin binding domain LFT46_07485 PF01967 MoaC family LFT46_07490 PF00994 Probable molybdopterin binding domain LFT46_07495 PF02391 MoaE protein LFT46_07500 PF05173 Dihydrodipicolinate reductase, C-terminus LFT46_07500 PF01113 Dihydrodipicolinate reductase, N-terminus LFT46_07525 PF00701 Dihydrodipicolinate synthetase family LFT46_07530 PF17770 Ribonuclease J C-terminal domain LFT46_07530 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LFT46_07530 PF12706 Beta-lactamase superfamily domain LFT46_07535 PF01580 FtsK/SpoIIIE family LFT46_07535 PF09397 Ftsk gamma domain LFT46_07535 PF17854 FtsK alpha domain LFT46_07540 PF01066 CDP-alcohol phosphatidyltransferase LFT46_07545 PF00994 Probable molybdopterin binding domain LFT46_07545 PF18146 Damage-inducible protein CinA KH domain LFT46_07545 PF02464 Competence-damaged protein LFT46_07565 PF00154 recA bacterial DNA recombination protein LFT46_07570 PF02631 RecX family LFT46_07575 PF04055 Radical SAM superfamily LFT46_07575 PF00919 Uncharacterized protein family UPF0004 LFT46_07585 PF01678 Diaminopimelate epimerase LFT46_07590 PF05175 Methyltransferase small domain LFT46_07595 PF16360 GTP-binding GTPase Middle Region LFT46_07595 PF13167 GTP-binding GTPase N-terminal LFT46_07595 PF01926 50S ribosome-binding GTPase LFT46_07600 PF13307 Helicase C-terminal domain LFT46_07605 PF01726 LexA DNA binding domain LFT46_07605 PF00717 Peptidase S24-like LFT46_07615 PF00155 Aminotransferase class I and II LFT46_07620 PF00475 Imidazoleglycerol-phosphate dehydratase LFT46_07625 PF00117 Glutamine amidotransferase class-I LFT46_07635 PF00977 Histidine biosynthesis protein LFT46_07655 PF00707 Translation initiation factor IF-3, C-terminal domain LFT46_07655 PF05198 Translation initiation factor IF-3, N-terminal domain LFT46_07660 PF01632 Ribosomal protein L35 LFT46_07665 PF00453 Ribosomal protein L20 LFT46_07670 PF00588 SpoU rRNA Methylase family LFT46_07675 PF04226 Transglycosylase associated protein LFT46_07680 PF07690 Major Facilitator Superfamily LFT46_07685 PF00293 NUDIX domain LFT46_07690 PF04055 Radical SAM superfamily LFT46_07705 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LFT46_07705 PF01409 tRNA synthetases class II core domain (F) LFT46_07710 PF03483 B3/4 domain LFT46_07710 PF03484 tRNA synthetase B5 domain LFT46_07710 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LFT46_07710 PF01588 Putative tRNA binding domain LFT46_07710 PF03147 Ferredoxin-fold anticodon binding domain LFT46_07715 PF00107 Zinc-binding dehydrogenase LFT46_07715 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_07720 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFT46_07720 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFT46_07725 PF01960 ArgJ family LFT46_07730 PF00696 Amino acid kinase family LFT46_07735 PF00202 Aminotransferase class-III LFT46_07740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFT46_07740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFT46_07745 PF01316 Arginine repressor, DNA binding domain LFT46_07745 PF02863 Arginine repressor, C-terminal domain LFT46_07750 PF00764 Arginosuccinate synthase LFT46_07755 PF14698 Argininosuccinate lyase C-terminal LFT46_07755 PF00206 Lyase LFT46_07760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LFT46_07760 PF01243 Pyridoxamine 5'-phosphate oxidase LFT46_07770 PF02805 Metal binding domain of Ada LFT46_07770 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFT46_07770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFT46_07770 PF12833 Helix-turn-helix domain LFT46_07775 PF06029 AlkA N-terminal domain LFT46_07775 PF02805 Metal binding domain of Ada LFT46_07775 PF00730 HhH-GPD superfamily base excision DNA repair protein LFT46_07775 PF12833 Helix-turn-helix domain LFT46_07780 PF02245 Methylpurine-DNA glycosylase (MPG) LFT46_07785 PF13538 UvrD-like helicase C-terminal domain LFT46_07790 PF00579 tRNA synthetases class I (W and Y) LFT46_07820 PF18407 GCN5-related N-acetyltransferase like domain LFT46_07820 PF13344 Haloacid dehalogenase-like hydrolase LFT46_07830 PF01728 FtsJ-like methyltransferase LFT46_07830 PF01479 S4 domain LFT46_07835 PF01513 ATP-NAD kinase LFT46_07840 PF02463 RecF/RecN/SMC N terminal domain LFT46_07845 PF00117 Glutamine amidotransferase class-I LFT46_07845 PF06418 CTP synthase N-terminus LFT46_07850 PF00293 NUDIX domain LFT46_07855 PF02899 Phage integrase, N-terminal SAM-like domain LFT46_07855 PF00589 Phage integrase family LFT46_07875 PF00285 Citrate synthase, C-terminal domain LFT46_07885 PF03972 MmgE/PrpD family LFT46_07890 PF07729 FCD domain LFT46_07890 PF00392 Bacterial regulatory proteins, gntR family LFT46_07895 PF13193 AMP-binding enzyme C-terminal domain LFT46_07895 PF16177 Acetyl-coenzyme A synthetase N-terminus LFT46_07895 PF00501 AMP-binding enzyme LFT46_07900 PF04703 FaeA-like protein LFT46_07900 PF00072 Response regulator receiver domain LFT46_07905 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFT46_07905 PF17203 Single cache domain 3 LFT46_07905 PF00989 PAS fold LFT46_07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_07910 PF00375 Sodium:dicarboxylate symporter family LFT46_07915 PF13614 AAA domain LFT46_07920 PF02616 Segregation and condensation protein ScpA LFT46_07925 PF04079 Segregation and condensation complex subunit ScpB LFT46_07930 PF01479 S4 domain LFT46_07930 PF00849 RNA pseudouridylate synthase LFT46_07935 PF02153 Prephenate dehydrogenase LFT46_07940 PF02224 Cytidylate kinase LFT46_07950 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LFT46_07950 PF01926 50S ribosome-binding GTPase LFT46_07960 PF01522 Polysaccharide deacetylase LFT46_07965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT46_07965 PF06827 Zinc finger found in FPG and IleRS LFT46_07970 PF01597 Glycine cleavage H-protein LFT46_07975 PF00498 FHA domain LFT46_07980 PF00376 MerR family regulatory protein LFT46_07985 PF02577 Bifunctional nuclease LFT46_07990 PF13411 MerR HTH family regulatory protein LFT46_07995 PF13614 AAA domain LFT46_08000 PF02785 Biotin carboxylase C-terminal domain LFT46_08000 PF00364 Biotin-requiring enzyme LFT46_08000 PF00682 HMGL-like LFT46_08000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT46_08000 PF00289 Biotin carboxylase, N-terminal domain LFT46_08000 PF02436 Conserved carboxylase domain LFT46_08005 PF00501 AMP-binding enzyme LFT46_08010 PF00480 ROK family LFT46_08020 PF12146 Serine aminopeptidase, S33 LFT46_08035 PF01474 Class-II DAHP synthetase family LFT46_08040 PF00069 Protein kinase domain LFT46_08040 PF03793 PASTA domain LFT46_08045 PF05257 CHAP domain LFT46_08045 PF01476 LysM domain LFT46_08055 PF00348 Polyprenyl synthetase LFT46_08065 PF11799 impB/mucB/samB family C-terminal domain LFT46_08065 PF00817 impB/mucB/samB family LFT46_08075 PF02381 MraZ protein, putative antitoxin-like LFT46_08080 PF01795 MraW methylase family LFT46_08090 PF03717 Penicillin-binding Protein dimerisation domain LFT46_08090 PF00905 Penicillin binding protein transpeptidase domain LFT46_08095 PF08245 Mur ligase middle domain LFT46_08095 PF01225 Mur ligase family, catalytic domain LFT46_08095 PF02875 Mur ligase family, glutamate ligase domain LFT46_08100 PF02875 Mur ligase family, glutamate ligase domain LFT46_08100 PF08245 Mur ligase middle domain LFT46_08100 PF01225 Mur ligase family, catalytic domain LFT46_08105 PF00953 Glycosyl transferase family 4 LFT46_08110 PF02875 Mur ligase family, glutamate ligase domain LFT46_08110 PF08245 Mur ligase middle domain LFT46_08115 PF01098 Cell cycle protein LFT46_08120 PF04101 Glycosyltransferase family 28 C-terminal domain LFT46_08120 PF03033 Glycosyltransferase family 28 N-terminal domain LFT46_08125 PF08245 Mur ligase middle domain LFT46_08125 PF02875 Mur ligase family, glutamate ligase domain LFT46_08125 PF01225 Mur ligase family, catalytic domain LFT46_08130 PF08478 POTRA domain, FtsQ-type LFT46_08130 PF03799 Cell division protein FtsQ LFT46_08135 PF00091 Tubulin/FtsZ family, GTPase domain LFT46_08135 PF12327 FtsZ family, C-terminal domain LFT46_08140 PF02578 Multi-copper polyphenol oxidoreductase laccase LFT46_08145 PF01168 Alanine racemase, N-terminal domain LFT46_08150 PF04472 Cell division protein SepF LFT46_08160 PF05103 DivIVA protein LFT46_08165 PF01252 Signal peptidase (SPase) II LFT46_08170 PF00849 RNA pseudouridylate synthase LFT46_08175 PF14579 Helix-hairpin-helix motif LFT46_08175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LFT46_08175 PF07733 Bacterial DNA polymerase III alpha NTPase domain LFT46_08175 PF02811 PHP domain LFT46_08190 PF00815 Histidinol dehydrogenase LFT46_08195 PF03477 ATP cone domain LFT46_08200 PF00480 ROK family LFT46_08205 PF00557 Metallopeptidase family M24 LFT46_08215 PF02548 Ketopantoate hydroxymethyltransferase LFT46_08220 PF00120 Glutamine synthetase, catalytic domain LFT46_08220 PF03951 Glutamine synthetase, beta-Grasp domain LFT46_08225 PF08335 GlnD PII-uridylyltransferase LFT46_08225 PF03710 Glutamate-ammonia ligase adenylyltransferase LFT46_08235 PF00120 Glutamine synthetase, catalytic domain LFT46_08235 PF03951 Glutamine synthetase, beta-Grasp domain LFT46_08260 PF04055 Radical SAM superfamily LFT46_08260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LFT46_08265 PF03099 Biotin/lipoate A/B protein ligase family LFT46_08270 PF03793 PASTA domain LFT46_08270 PF00069 Protein kinase domain LFT46_08275 PF01370 NAD dependent epimerase/dehydratase family LFT46_08275 PF08338 Domain of unknown function (DUF1731) LFT46_08280 PF03572 Peptidase family S41 LFT46_08280 PF14684 Tricorn protease C1 domain LFT46_08280 PF14685 Tricorn protease PDZ domain LFT46_08280 PF07676 WD40-like Beta Propeller Repeat LFT46_08285 PF02566 OsmC-like protein LFT46_08295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT46_08295 PF00364 Biotin-requiring enzyme LFT46_08295 PF02817 e3 binding domain LFT46_08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_08300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFT46_08305 PF00883 Cytosol aminopeptidase family, catalytic domain LFT46_08305 PF02789 Cytosol aminopeptidase family, N-terminal domain LFT46_08325 PF04542 Sigma-70 region 2 LFT46_08325 PF04539 Sigma-70 region 3 LFT46_08325 PF04545 Sigma-70, region 4 LFT46_08325 PF00140 Sigma-70 factor, region 1.2 LFT46_08335 PF00204 DNA gyrase B LFT46_08335 PF00986 DNA gyrase B subunit, carboxyl terminus LFT46_08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_08335 PF01751 Toprim domain LFT46_08350 PF03965 Penicillinase repressor LFT46_08355 PF01654 Cytochrome bd terminal oxidase subunit I LFT46_08360 PF02322 Cytochrome bd terminal oxidase subunit II LFT46_08365 PF00664 ABC transporter transmembrane region LFT46_08365 PF00005 ABC transporter LFT46_08375 PF00005 ABC transporter LFT46_08375 PF13732 Domain of unknown function (DUF4162) LFT46_08385 PF03989 DNA gyrase C-terminal domain, beta-propeller LFT46_08385 PF00521 DNA gyrase/topoisomerase IV, subunit A LFT46_08390 PF13302 Acetyltransferase (GNAT) domain LFT46_08390 PF00027 Cyclic nucleotide-binding domain LFT46_08405 PF00265 Thymidine kinase LFT46_08425 PF11268 Protein of unknown function (DUF3071) LFT46_08435 PF00692 dUTPase LFT46_08455 PF02254 TrkA-N domain LFT46_08455 PF02080 TrkA-C domain LFT46_08460 PF02254 TrkA-N domain LFT46_08460 PF02080 TrkA-C domain LFT46_08465 PF13520 Amino acid permease LFT46_08470 PF01938 TRAM domain LFT46_08470 PF05958 tRNA (Uracil-5-)-methyltransferase LFT46_08475 PF00330 Aconitase family (aconitate hydratase) LFT46_08475 PF00694 Aconitase C-terminal domain LFT46_08480 PF02779 Transketolase, pyrimidine binding domain LFT46_08480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LFT46_08480 PF02780 Transketolase, C-terminal domain LFT46_08495 PF00248 Aldo/keto reductase family LFT46_08500 PF01156 Inosine-uridine preferring nucleoside hydrolase LFT46_08515 PF00005 ABC transporter LFT46_08520 PF00378 Enoyl-CoA hydratase/isomerase LFT46_08520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFT46_08520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFT46_08525 PF02803 Thiolase, C-terminal domain LFT46_08525 PF00108 Thiolase, N-terminal domain LFT46_08530 PF01612 3'-5' exonuclease LFT46_08530 PF00570 HRDC domain LFT46_08540 PF01212 Beta-eliminating lyase LFT46_08555 PF01641 SelR domain LFT46_08570 PF00171 Aldehyde dehydrogenase family LFT46_08575 PF00106 short chain dehydrogenase LFT46_08580 PF04073 Aminoacyl-tRNA editing domain LFT46_08585 PF02657 Fe-S metabolism associated domain LFT46_08590 PF00581 Rhodanese-like domain LFT46_08600 PF03594 Benzoate membrane transport protein LFT46_08645 PF01327 Polypeptide deformylase LFT46_08650 PF00551 Formyl transferase LFT46_08650 PF02911 Formyl transferase, C-terminal domain LFT46_08655 PF01029 NusB family LFT46_08655 PF01189 16S rRNA methyltransferase RsmB/F LFT46_08660 PF00834 Ribulose-phosphate 3 epimerase family LFT46_08665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFT46_08665 PF01872 RibD C-terminal domain LFT46_08670 PF00677 Lumazine binding domain LFT46_08675 PF00925 GTP cyclohydrolase II LFT46_08675 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFT46_08680 PF00925 GTP cyclohydrolase II LFT46_08680 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFT46_08685 PF00885 6,7-dimethyl-8-ribityllumazine synthase LFT46_08690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LFT46_08695 PF01634 ATP phosphoribosyltransferase LFT46_08695 PF08029 HisG, C-terminal domain LFT46_08700 PF00977 Histidine biosynthesis protein LFT46_08710 PF01502 Phosphoribosyl-AMP cyclohydrolase LFT46_08715 PF00425 chorismate binding enzyme LFT46_08715 PF04715 Anthranilate synthase component I, N terminal region LFT46_08730 PF00218 Indole-3-glycerol phosphate synthase LFT46_08735 PF00291 Pyridoxal-phosphate dependent enzyme LFT46_08740 PF00290 Tryptophan synthase alpha chain LFT46_08745 PF01790 Prolipoprotein diacylglyceryl transferase LFT46_08750 PF01645 Conserved region in glutamate synthase LFT46_08750 PF01493 GXGXG motif LFT46_08750 PF00310 Glutamine amidotransferases class-II LFT46_08750 PF04898 Glutamate synthase central domain LFT46_08755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFT46_08755 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_08760 PF00224 Pyruvate kinase, barrel domain LFT46_08760 PF02887 Pyruvate kinase, alpha/beta domain LFT46_08765 PF00072 Response regulator receiver domain LFT46_08765 PF03861 ANTAR domain LFT46_08775 PF02899 Phage integrase, N-terminal SAM-like domain LFT46_08775 PF00589 Phage integrase family LFT46_08800 PF04343 Protein of unknown function, DUF488 LFT46_08805 PF00723 Glycosyl hydrolases family 15 LFT46_08820 PF00809 Pterin binding enzyme LFT46_08825 PF14759 Reductase C-terminal LFT46_08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_08830 PF01227 GTP cyclohydrolase I LFT46_08885 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LFT46_08890 PF00356 Bacterial regulatory proteins, lacI family LFT46_08910 PF00174 Oxidoreductase molybdopterin binding domain LFT46_08920 PF00083 Sugar (and other) transporter LFT46_08925 PF00723 Glycosyl hydrolases family 15 LFT46_08930 PF00106 short chain dehydrogenase LFT46_08950 PF00732 GMC oxidoreductase LFT46_08950 PF05199 GMC oxidoreductase LFT46_08955 PF13378 Enolase C-terminal domain-like LFT46_08955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_08960 PF07690 Major Facilitator Superfamily LFT46_08965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_08965 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_08965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_08975 PF00723 Glycosyl hydrolases family 15 LFT46_08995 PF01263 Aldose 1-epimerase LFT46_09000 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_09000 PF00107 Zinc-binding dehydrogenase LFT46_09005 PF03631 Virulence factor BrkB LFT46_09040 PF00905 Penicillin binding protein transpeptidase domain LFT46_09040 PF00912 Transglycosylase LFT46_09060 PF13180 PDZ domain LFT46_09070 PF00563 EAL domain LFT46_09070 PF00990 Diguanylate cyclase, GGDEF domain LFT46_09070 PF13188 PAS domain LFT46_09070 PF03707 Bacterial signalling protein N terminal repeat LFT46_09075 PF13411 MerR HTH family regulatory protein LFT46_09080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFT46_09080 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_09130 PF00665 Integrase core domain LFT46_09130 PF13936 Helix-turn-helix domain LFT46_09155 PF00440 Bacterial regulatory proteins, tetR family LFT46_09165 PF00171 Aldehyde dehydrogenase family LFT46_09170 PF00083 Sugar (and other) transporter LFT46_09175 PF00107 Zinc-binding dehydrogenase LFT46_09175 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_09185 PF00005 ABC transporter LFT46_09190 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_09195 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT46_09200 PF01022 Bacterial regulatory protein, arsR family LFT46_09205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_09205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFT46_09225 PF00083 Sugar (and other) transporter LFT46_09230 PF04909 Amidohydrolase LFT46_09235 PF03737 Aldolase/RraA LFT46_09240 PF04909 Amidohydrolase LFT46_09245 PF04303 PrpF protein LFT46_09250 PF00392 Bacterial regulatory proteins, gntR family LFT46_09250 PF07729 FCD domain LFT46_09260 PF01274 Malate synthase LFT46_09265 PF02913 FAD linked oxidases, C-terminal domain LFT46_09265 PF01565 FAD binding domain LFT46_09270 PF02652 L-lactate permease LFT46_09275 PF02632 BioY family LFT46_09295 PF02525 Flavodoxin-like fold LFT46_09300 PF00561 alpha/beta hydrolase fold LFT46_09315 PF01965 DJ-1/PfpI family LFT46_09330 PF00106 short chain dehydrogenase LFT46_09335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT46_09335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_09345 PF01323 DSBA-like thioredoxin domain LFT46_09360 PF00188 Cysteine-rich secretory protein family LFT46_09360 PF14504 CAP-associated N-terminal LFT46_09375 PF00723 Glycosyl hydrolases family 15 LFT46_09390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_09390 PF13378 Enolase C-terminal domain-like LFT46_09395 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_09395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_09395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_09420 PF01263 Aldose 1-epimerase LFT46_09425 PF00107 Zinc-binding dehydrogenase LFT46_09425 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_09450 PF13247 4Fe-4S dicluster domain LFT46_09450 PF09163 Formate dehydrogenase N, transmembrane LFT46_09460 PF00586 AIR synthase related protein, N-terminal domain LFT46_09460 PF02769 AIR synthase related protein, C-terminal domain LFT46_09470 PF12390 Selenocysteine synthase N terminal LFT46_09470 PF03841 L-seryl-tRNA selenium transferase LFT46_09475 PF00009 Elongation factor Tu GTP binding domain LFT46_09475 PF03144 Elongation factor Tu domain 2 LFT46_09475 PF09105 Elongation factor SelB, winged helix LFT46_09475 PF09106 Elongation factor SelB, winged helix LFT46_09475 PF09107 Elongation factor SelB, winged helix LFT46_09495 PF00107 Zinc-binding dehydrogenase LFT46_09495 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_09505 PF00067 Cytochrome P450 LFT46_09515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_09515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_09520 PF00553 Cellulose binding domain LFT46_09520 PF00331 Glycosyl hydrolase family 10 LFT46_09525 PF05448 Acetyl xylan esterase (AXE1) LFT46_09530 PF14310 Fibronectin type III-like domain LFT46_09530 PF00933 Glycosyl hydrolase family 3 N terminal domain LFT46_09530 PF01915 Glycosyl hydrolase family 3 C-terminal domain LFT46_09535 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_09540 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_09545 PF01547 Bacterial extracellular solute-binding protein LFT46_09550 PF00356 Bacterial regulatory proteins, lacI family LFT46_09555 PF01757 Acyltransferase family LFT46_09565 PF00248 Aldo/keto reductase family LFT46_09575 PF01145 SPFH domain / Band 7 family LFT46_09575 PF15975 Flotillin LFT46_09585 PF00083 Sugar (and other) transporter LFT46_09585 PF07690 Major Facilitator Superfamily LFT46_09590 PF01613 Flavin reductase like domain LFT46_09595 PF00378 Enoyl-CoA hydratase/isomerase LFT46_09605 PF17755 UvrA DNA-binding domain LFT46_09630 PF00300 Histidine phosphatase superfamily (branch 1) LFT46_09635 PF01078 Magnesium chelatase, subunit ChlI LFT46_09635 PF17863 AAA lid domain LFT46_09660 PF01367 5'-3' exonuclease, C-terminal SAM fold LFT46_09660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFT46_09665 PF01613 Flavin reductase like domain LFT46_09680 PF08482 ATP-dependent helicase C-terminal LFT46_09680 PF00270 DEAD/DEAH box helicase LFT46_09680 PF04408 Helicase associated domain (HA2) LFT46_09680 PF00271 Helicase conserved C-terminal domain LFT46_09695 PF01300 Telomere recombination LFT46_09700 PF13493 Domain of unknown function (DUF4118) LFT46_09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_09700 PF00512 His Kinase A (phospho-acceptor) domain LFT46_09700 PF02702 Osmosensitive K+ channel His kinase sensor domain LFT46_09700 PF00582 Universal stress protein family LFT46_09705 PF00486 Transcriptional regulatory protein, C terminal LFT46_09705 PF00072 Response regulator receiver domain LFT46_09725 PF01384 Phosphate transporter family LFT46_09740 PF03061 Thioesterase superfamily LFT46_09745 PF01367 5'-3' exonuclease, C-terminal SAM fold LFT46_09745 PF00476 DNA polymerase family A LFT46_09745 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFT46_09750 PF17668 Acetyltransferase (GNAT) domain LFT46_09750 PF13530 Sterol carrier protein domain LFT46_09755 PF00575 S1 RNA binding domain LFT46_09765 PF09186 Domain of unknown function (DUF1949) LFT46_09765 PF01205 Uncharacterized protein family UPF0029 LFT46_09775 PF01121 Dephospho-CoA kinase LFT46_09775 PF04229 GrpB protein LFT46_09780 PF17757 UvrB interaction domain LFT46_09780 PF02151 UvrB/uvrC motif LFT46_09780 PF04851 Type III restriction enzyme, res subunit LFT46_09780 PF00271 Helicase conserved C-terminal domain LFT46_09780 PF12344 Ultra-violet resistance protein B LFT46_09785 PF13416 Bacterial extracellular solute-binding protein LFT46_09790 PF03741 Integral membrane protein TerC family LFT46_09795 PF07690 Major Facilitator Superfamily LFT46_09800 PF00561 alpha/beta hydrolase fold LFT46_09820 PF00664 ABC transporter transmembrane region LFT46_09820 PF00005 ABC transporter LFT46_09825 PF00664 ABC transporter transmembrane region LFT46_09825 PF00005 ABC transporter LFT46_09835 PF00005 ABC transporter LFT46_09835 PF17755 UvrA DNA-binding domain LFT46_09835 PF17760 UvrA interaction domain LFT46_09840 PF13419 Haloacid dehalogenase-like hydrolase LFT46_09845 PF01553 Acyltransferase LFT46_09845 PF00501 AMP-binding enzyme LFT46_09850 PF01541 GIY-YIG catalytic domain LFT46_09850 PF02151 UvrB/uvrC motif LFT46_09850 PF08459 UvrC Helix-hairpin-helix N-terminal LFT46_09855 PF03668 P-loop ATPase protein family LFT46_09860 PF01933 Uncharacterised protein family UPF0052 LFT46_09865 PF10298 WhiA N-terminal LAGLIDADG-like domain LFT46_09865 PF14527 WhiA LAGLIDADG-like domain LFT46_09865 PF02650 WhiA C-terminal HTH domain LFT46_09870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LFT46_09870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LFT46_09875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFT46_09875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFT46_09880 PF00162 Phosphoglycerate kinase LFT46_09885 PF00121 Triosephosphate isomerase LFT46_09890 PF03840 Preprotein translocase SecG subunit LFT46_09900 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFT46_09910 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFT46_09910 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFT46_09915 PF00342 Phosphoglucose isomerase LFT46_09920 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFT46_09925 PF00456 Transketolase, thiamine diphosphate binding domain LFT46_09925 PF02779 Transketolase, pyrimidine binding domain LFT46_09925 PF02780 Transketolase, C-terminal domain LFT46_09930 PF01040 UbiA prenyltransferase family LFT46_09940 PF02628 Cytochrome oxidase assembly protein LFT46_09950 PF00005 ABC transporter LFT46_09960 PF01458 Uncharacterized protein family (UPF0051) LFT46_09965 PF01458 Uncharacterized protein family (UPF0051) LFT46_09975 PF00005 ABC transporter LFT46_09980 PF01883 Iron-sulfur cluster assembly protein LFT46_09985 PF04228 Putative neutral zinc metallopeptidase LFT46_09990 PF13193 AMP-binding enzyme C-terminal domain LFT46_09990 PF00501 AMP-binding enzyme LFT46_09995 PF02803 Thiolase, C-terminal domain LFT46_09995 PF00108 Thiolase, N-terminal domain LFT46_10005 PF00005 ABC transporter LFT46_10010 PF02632 BioY family LFT46_10045 PF13936 Helix-turn-helix domain LFT46_10045 PF00665 Integrase core domain LFT46_10105 PF00743 Flavin-binding monooxygenase-like LFT46_10110 PF00440 Bacterial regulatory proteins, tetR family LFT46_10115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFT46_10115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFT46_10120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT46_10125 PF05661 Protein of unknown function (DUF808) LFT46_10135 PF16326 ABC transporter C-terminal domain LFT46_10135 PF12848 ABC transporter LFT46_10135 PF00005 ABC transporter LFT46_10140 PF03129 Anticodon binding domain LFT46_10140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT46_10140 PF04073 Aminoacyl-tRNA editing domain LFT46_10145 PF02104 SURF1 family LFT46_10175 PF00005 ABC transporter LFT46_10185 PF00588 SpoU rRNA Methylase family LFT46_10190 PF01197 Ribosomal protein L31 LFT46_10195 PF03099 Biotin/lipoate A/B protein ligase family LFT46_10195 PF10437 Bacterial lipoate protein ligase C-terminus LFT46_10200 PF11838 ERAP1-like C-terminal domain LFT46_10200 PF01433 Peptidase family M1 domain LFT46_10205 PF03601 Conserved hypothetical protein 698 LFT46_10210 PF04174 A circularly permuted ATPgrasp LFT46_10220 PF01841 Transglutaminase-like superfamily LFT46_10220 PF08379 Bacterial transglutaminase-like N-terminal region LFT46_10230 PF00106 short chain dehydrogenase LFT46_10235 PF00483 Nucleotidyl transferase LFT46_10240 PF13439 Glycosyltransferase Family 4 LFT46_10240 PF00534 Glycosyl transferases group 1 LFT46_10255 PF02803 Thiolase, C-terminal domain LFT46_10255 PF00108 Thiolase, N-terminal domain LFT46_10265 PF01575 MaoC like domain LFT46_10280 PF13409 Glutathione S-transferase, N-terminal domain LFT46_10315 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_10315 PF00107 Zinc-binding dehydrogenase LFT46_10340 PF00082 Subtilase family LFT46_10340 PF04151 Bacterial pre-peptidase C-terminal domain LFT46_10350 PF01546 Peptidase family M20/M25/M40 LFT46_10350 PF07687 Peptidase dimerisation domain LFT46_10355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_10355 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_10355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_10370 PF00248 Aldo/keto reductase family LFT46_10375 PF02673 Bacitracin resistance protein BacA LFT46_10380 PF01406 tRNA synthetases class I (C) catalytic domain LFT46_10390 PF13419 Haloacid dehalogenase-like hydrolase LFT46_10395 PF02163 Peptidase family M50 LFT46_10395 PF00571 CBS domain LFT46_10400 PF08704 tRNA methyltransferase complex GCD14 subunit LFT46_10405 PF16450 Proteasomal ATPase OB C-terminal domain LFT46_10405 PF17758 Proteasomal ATPase OB N-terminal domain LFT46_10405 PF00004 ATPase family associated with various cellular activities (AAA) LFT46_10410 PF03136 Pup-ligase protein LFT46_10415 PF05639 Pup-like protein LFT46_10420 PF00227 Proteasome subunit LFT46_10425 PF00227 Proteasome subunit LFT46_10430 PF03136 Pup-ligase protein LFT46_10435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFT46_10435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LFT46_10440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFT46_10445 PF13280 WYL domain LFT46_10455 PF02416 mttA/Hcf106 family LFT46_10460 PF00902 Sec-independent protein translocase protein (TatC) LFT46_10465 PF00270 DEAD/DEAH box helicase LFT46_10465 PF08148 DSHCT (NUC185) domain LFT46_10465 PF00271 Helicase conserved C-terminal domain LFT46_10470 PF07969 Amidohydrolase family LFT46_10475 PF00535 Glycosyl transferase family 2 LFT46_10480 PF13397 RNA polymerase-binding protein LFT46_10485 PF01145 SPFH domain / Band 7 family LFT46_10500 PF01327 Polypeptide deformylase LFT46_10510 PF01494 FAD binding domain LFT46_10520 PF00195 Chalcone and stilbene synthases, N-terminal domain LFT46_10520 PF02797 Chalcone and stilbene synthases, C-terminal domain LFT46_10525 PF00589 Phage integrase family LFT46_10525 PF02899 Phage integrase, N-terminal SAM-like domain LFT46_10555 PF02885 Glycosyl transferase family, helical bundle domain LFT46_10555 PF00591 Glycosyl transferase family, a/b domain LFT46_10560 PF00510 Cytochrome c oxidase subunit III LFT46_10565 PF00034 Cytochrome c LFT46_10565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LFT46_10570 PF00355 Rieske [2Fe-2S] domain LFT46_10575 PF13631 Cytochrome b(N-terminal)/b6/petB LFT46_10580 PF00392 Bacterial regulatory proteins, gntR family LFT46_10580 PF07729 FCD domain LFT46_10590 PF12270 Cytochrome c oxidase subunit IV LFT46_10595 PF00115 Cytochrome C and Quinol oxidase polypeptide I LFT46_10600 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LFT46_10605 PF01521 Iron-sulphur cluster biosynthesis LFT46_10610 PF01546 Peptidase family M20/M25/M40 LFT46_10610 PF07687 Peptidase dimerisation domain LFT46_10615 PF11241 Protein of unknown function (DUF3043) LFT46_10620 PF01180 Dihydroorotate dehydrogenase LFT46_10630 PF01255 Putative undecaprenyl diphosphate synthase LFT46_10635 PF11967 Recombination protein O N terminal LFT46_10635 PF02565 Recombination protein O C terminal LFT46_10640 PF00682 HMGL-like LFT46_10640 PF08502 LeuA allosteric (dimerisation) domain LFT46_10645 PF01431 Peptidase family M13 LFT46_10645 PF05649 Peptidase family M13 LFT46_10650 PF03816 Cell envelope-related transcriptional attenuator domain LFT46_10650 PF13399 LytR cell envelope-related transcriptional attenuator LFT46_10655 PF07650 KH domain LFT46_10655 PF01926 50S ribosome-binding GTPase LFT46_10660 PF03471 Transporter associated domain LFT46_10660 PF01595 Cyclin M transmembrane N-terminal domain LFT46_10660 PF00571 CBS domain LFT46_10665 PF02130 Uncharacterized protein family UPF0054 LFT46_10670 PF02562 PhoH-like protein LFT46_10680 PF04452 RNA methyltransferase LFT46_10685 PF00684 DnaJ central domain LFT46_10685 PF01556 DnaJ C terminal domain LFT46_10685 PF00226 DnaJ domain LFT46_10690 PF08220 DeoR-like helix-turn-helix domain LFT46_10690 PF01628 HrcA protein C terminal domain LFT46_10705 PF04055 Radical SAM superfamily LFT46_10710 PF00009 Elongation factor Tu GTP binding domain LFT46_10710 PF00679 Elongation factor G C-terminus LFT46_10710 PF06421 GTP-binding protein LepA C-terminus LFT46_10720 PF01649 Ribosomal protein S20 LFT46_10740 PF05656 Protein of unknown function (DUF805) LFT46_10750 PF02645 Uncharacterised protein, DegV family COG1307 LFT46_10755 PF00133 tRNA synthetases class I (I, L, M and V) LFT46_10755 PF13603 Leucyl-tRNA synthetase, Domain 2 LFT46_10755 PF09334 tRNA synthetases class I (M) LFT46_10755 PF08264 Anticodon-binding domain of tRNA LFT46_10760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT46_10760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT46_10765 PF00230 Major intrinsic protein LFT46_10770 PF01266 FAD dependent oxidoreductase LFT46_10770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LFT46_10775 PF04198 Putative sugar-binding domain LFT46_10780 PF00248 Aldo/keto reductase family LFT46_10790 PF13439 Glycosyltransferase Family 4 LFT46_10795 PF17764 3′ DNA-binding domain (3′BD) LFT46_10800 PF02773 S-adenosylmethionine synthetase, C-terminal domain LFT46_10800 PF02772 S-adenosylmethionine synthetase, central domain LFT46_10800 PF00438 S-adenosylmethionine synthetase, N-terminal domain LFT46_10805 PF04127 DNA / pantothenate metabolism flavoprotein LFT46_10805 PF02441 Flavoprotein LFT46_10810 PF01192 RNA polymerase Rpb6 LFT46_10815 PF00625 Guanylate kinase LFT46_10820 PF00625 Guanylate kinase LFT46_10825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFT46_10830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT46_10830 PF02142 MGS-like domain LFT46_10830 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LFT46_10835 PF00117 Glutamine amidotransferase class-I LFT46_10835 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LFT46_10845 PF01979 Amidohydrolase family LFT46_10850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFT46_10850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFT46_10855 PF00156 Phosphoribosyl transferase domain LFT46_10865 PF01029 NusB family LFT46_10870 PF09285 Elongation factor P, C-terminal LFT46_10870 PF01132 Elongation factor P (EF-P) OB domain LFT46_10870 PF08207 Elongation factor P (EF-P) KOW-like domain LFT46_10880 PF01761 3-dehydroquinate synthase LFT46_10885 PF01202 Shikimate kinase LFT46_10890 PF01264 Chorismate synthase LFT46_10895 PF01488 Shikimate / quinate 5-dehydrogenase LFT46_10895 PF08501 Shikimate dehydrogenase substrate binding domain LFT46_10895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LFT46_10905 PF03652 Holliday junction resolvase LFT46_10910 PF02272 DHHA1 domain LFT46_10910 PF01411 tRNA synthetases class II (A) LFT46_10910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFT46_10925 PF01479 S4 domain LFT46_10925 PF00163 Ribosomal protein S4/S9 N-terminal domain LFT46_10930 PF12002 MgsA AAA+ ATPase C terminal LFT46_10930 PF16193 AAA C-terminal domain LFT46_10930 PF00004 ATPase family associated with various cellular activities (AAA) LFT46_10945 PF00152 tRNA synthetases class II (D, K and N) LFT46_10945 PF01336 OB-fold nucleic acid binding domain LFT46_10945 PF02938 GAD domain LFT46_10950 PF13520 Amino acid permease LFT46_10955 PF03129 Anticodon binding domain LFT46_10955 PF13393 Histidyl-tRNA synthetase LFT46_10960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFT46_10965 PF03993 Domain of Unknown Function (DUF349) LFT46_10975 PF13291 ACT domain LFT46_10975 PF04607 Region found in RelA / SpoT proteins LFT46_10975 PF02824 TGS domain LFT46_10980 PF02355 Protein export membrane protein LFT46_10980 PF07549 SecD/SecF GG Motif LFT46_10985 PF07549 SecD/SecF GG Motif LFT46_10985 PF02355 Protein export membrane protein LFT46_10995 PF05496 Holliday junction DNA helicase RuvB P-loop domain LFT46_10995 PF17864 RuvB AAA lid domain LFT46_10995 PF05491 RuvB C-terminal winged helix domain LFT46_11000 PF01330 RuvA N terminal domain LFT46_11000 PF07499 RuvA, C-terminal domain LFT46_11005 PF02075 Crossover junction endodeoxyribonuclease RuvC LFT46_11010 PF01709 Transcriptional regulator LFT46_11015 PF01174 SNO glutamine amidotransferase family LFT46_11020 PF08353 Domain of unknown function (DUF1727) LFT46_11020 PF08245 Mur ligase middle domain LFT46_11025 PF07685 CobB/CobQ-like glutamine amidotransferase domain LFT46_11030 PF00970 Oxidoreductase FAD-binding domain LFT46_11030 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT46_11030 PF00175 Oxidoreductase NAD-binding domain LFT46_11035 PF01432 Peptidase family M3 LFT46_11040 PF01680 SOR/SNZ family LFT46_11045 PF01066 CDP-alcohol phosphatidyltransferase LFT46_11050 PF01230 HIT domain LFT46_11055 PF03129 Anticodon binding domain LFT46_11055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFT46_11055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT46_11060 PF02811 PHP domain LFT46_11060 PF07733 Bacterial DNA polymerase III alpha NTPase domain LFT46_11060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LFT46_11060 PF14579 Helix-hairpin-helix motif LFT46_11075 PF01842 ACT domain LFT46_11075 PF01817 Chorismate mutase type II LFT46_11075 PF00800 Prephenate dehydratase LFT46_11085 PF02586 SOS response associated peptidase (SRAP) LFT46_11090 PF00462 Glutaredoxin LFT46_11100 PF03109 ABC1 family LFT46_11105 PF03551 Transcriptional regulator PadR-like family LFT46_11120 PF00293 NUDIX domain LFT46_11120 PF02545 Maf-like protein LFT46_11160 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LFT46_11165 PF00753 Metallo-beta-lactamase superfamily LFT46_11165 PF12706 Beta-lactamase superfamily domain LFT46_11180 PF01594 AI-2E family transporter LFT46_11185 PF00582 Universal stress protein family LFT46_11195 PF00582 Universal stress protein family LFT46_11205 PF00689 Cation transporting ATPase, C-terminus LFT46_11205 PF00690 Cation transporter/ATPase, N-terminus LFT46_11230 PF00582 Universal stress protein family LFT46_11235 PF00196 Bacterial regulatory proteins, luxR family LFT46_11235 PF00072 Response regulator receiver domain LFT46_11240 PF13492 GAF domain LFT46_11240 PF13185 GAF domain LFT46_11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_11240 PF07730 Histidine kinase LFT46_11250 PF00582 Universal stress protein family LFT46_11260 PF00011 Hsp20/alpha crystallin family LFT46_11265 PF00391 PEP-utilising enzyme, mobile domain LFT46_11265 PF02896 PEP-utilising enzyme, TIM barrel domain LFT46_11265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT46_11270 PF00689 Cation transporting ATPase, C-terminus LFT46_11270 PF00690 Cation transporter/ATPase, N-terminus LFT46_11280 PF00403 Heavy-metal-associated domain LFT46_11335 PF00582 Universal stress protein family LFT46_11355 PF07859 alpha/beta hydrolase fold LFT46_11380 PF13302 Acetyltransferase (GNAT) domain LFT46_11395 PF17866 AAA lid domain LFT46_11395 PF00004 ATPase family associated with various cellular activities (AAA) LFT46_11400 PF04012 PspA/IM30 family LFT46_11405 PF00296 Luciferase-like monooxygenase LFT46_11420 PF00459 Inositol monophosphatase family LFT46_11445 PF13520 Amino acid permease LFT46_11450 PF03551 Transcriptional regulator PadR-like family LFT46_11490 PF02384 N-6 DNA Methylase LFT46_11500 PF18766 SWI2/SNF2 ATPase LFT46_11500 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LFT46_11500 PF11867 Domain of unknown function (DUF3387) LFT46_11525 PF00268 Ribonucleotide reductase, small chain LFT46_11530 PF02867 Ribonucleotide reductase, barrel domain LFT46_11530 PF08343 Ribonucleotide reductase N-terminal LFT46_11530 PF00317 Ribonucleotide reductase, all-alpha domain LFT46_11535 PF07972 NrdI Flavodoxin like LFT46_11565 PF03466 LysR substrate binding domain LFT46_11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_11580 PF08267 Cobalamin-independent synthase, N-terminal domain LFT46_11580 PF01717 Cobalamin-independent synthase, Catalytic domain LFT46_11585 PF02219 Methylenetetrahydrofolate reductase LFT46_11610 PF17863 AAA lid domain LFT46_11610 PF07726 ATPase family associated with various cellular activities (AAA) LFT46_11625 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_11630 PF01547 Bacterial extracellular solute-binding protein LFT46_11635 PF00480 ROK family LFT46_11640 PF05175 Methyltransferase small domain LFT46_11640 PF08468 Methyltransferase small domain N-terminal LFT46_11645 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_11655 PF00665 Integrase core domain LFT46_11660 PF00474 Sodium:solute symporter family LFT46_11690 PF01467 Cytidylyltransferase-like LFT46_11700 PF00171 Aldehyde dehydrogenase family LFT46_11705 PF00696 Amino acid kinase family LFT46_11705 PF01472 PUA domain LFT46_11710 PF09269 Domain of unknown function (DUF1967) LFT46_11710 PF01018 GTP1/OBG LFT46_11710 PF01926 50S ribosome-binding GTPase LFT46_11715 PF01016 Ribosomal L27 protein LFT46_11720 PF00829 Ribosomal prokaryotic L21 protein LFT46_11725 PF08543 Phosphomethylpyrimidine kinase LFT46_11725 PF03070 TENA/THI-4/PQQC family LFT46_11725 PF02581 Thiamine monophosphate synthase LFT46_11730 PF10150 Ribonuclease E/G family LFT46_11740 PF00334 Nucleoside diphosphate kinase LFT46_11750 PF08245 Mur ligase middle domain LFT46_11750 PF02875 Mur ligase family, glutamate ligase domain LFT46_11755 PF00133 tRNA synthetases class I (I, L, M and V) LFT46_11755 PF08264 Anticodon-binding domain of tRNA LFT46_11760 PF00106 short chain dehydrogenase LFT46_11765 PF04343 Protein of unknown function, DUF488 LFT46_11770 PF08264 Anticodon-binding domain of tRNA LFT46_11770 PF00133 tRNA synthetases class I (I, L, M and V) LFT46_11775 PF01323 DSBA-like thioredoxin domain LFT46_11780 PF06689 ClpX C4-type zinc finger LFT46_11780 PF10431 C-terminal, D2-small domain, of ClpB protein LFT46_11780 PF07724 AAA domain (Cdc48 subfamily) LFT46_11785 PF00574 Clp protease LFT46_11790 PF00574 Clp protease LFT46_11795 PF05698 Bacterial trigger factor protein (TF) C-terminus LFT46_11795 PF05697 Bacterial trigger factor protein (TF) LFT46_11795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFT46_11810 PF06827 Zinc finger found in FPG and IleRS LFT46_11810 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT46_11810 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFT46_11815 PF02502 Ribose/Galactose Isomerase LFT46_11825 PF01433 Peptidase family M1 domain LFT46_11825 PF11838 ERAP1-like C-terminal domain LFT46_11840 PF00924 Mechanosensitive ion channel LFT46_11845 PF01152 Bacterial-like globin LFT46_11860 PF00665 Integrase core domain LFT46_11865 PF12848 ABC transporter LFT46_11865 PF00005 ABC transporter LFT46_11890 PF01261 Xylose isomerase-like TIM barrel LFT46_11895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT46_11895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT46_11910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_11910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_11915 PF00356 Bacterial regulatory proteins, lacI family LFT46_11920 PF13472 GDSL-like Lipase/Acylhydrolase family LFT46_11920 PF07859 alpha/beta hydrolase fold LFT46_11925 PF01263 Aldose 1-epimerase LFT46_11940 PF00929 Exonuclease LFT46_11950 PF01327 Polypeptide deformylase LFT46_11965 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFT46_11965 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFT46_11980 PF03883 Peroxide stress protein YaaA LFT46_11985 PF02591 C4-type zinc ribbon domain LFT46_11990 PF01784 NIF3 (NGG1p interacting factor 3) LFT46_11995 PF01625 Peptide methionine sulfoxide reductase LFT46_12000 PF00291 Pyridoxal-phosphate dependent enzyme LFT46_12005 PF00132 Bacterial transferase hexapeptide (six repeats) LFT46_12010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_12010 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LFT46_12015 PF07729 FCD domain LFT46_12015 PF00392 Bacterial regulatory proteins, gntR family LFT46_12030 PF02146 Sir2 family LFT46_12035 PF00578 AhpC/TSA family LFT46_12040 PF11253 Protein of unknown function (DUF3052) LFT46_12045 PF17831 Pyruvate dehydrogenase E1 component middle domain LFT46_12045 PF00456 Transketolase, thiamine diphosphate binding domain LFT46_12050 PF13556 PucR C-terminal helix-turn-helix domain LFT46_12050 PF17853 GGDEF-like domain LFT46_12055 PF00698 Acyl transferase domain LFT46_12060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFT46_12060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFT46_12065 PF00550 Phosphopantetheine attachment site LFT46_12070 PF02801 Beta-ketoacyl synthase, C-terminal domain LFT46_12070 PF00109 Beta-ketoacyl synthase, N-terminal domain LFT46_12080 PF00589 Phage integrase family LFT46_12080 PF02899 Phage integrase, N-terminal SAM-like domain LFT46_12085 PF02481 DNA recombination-mediator protein A LFT46_12085 PF17782 DprA winged helix domain LFT46_12090 PF01078 Magnesium chelatase, subunit ChlI LFT46_12090 PF13335 Magnesium chelatase, subunit ChlI C-terminal LFT46_12095 PF02021 Uncharacterised protein family UPF0102 LFT46_12100 PF10611 Protein of unknown function (DUF2469) LFT46_12105 PF01351 Ribonuclease HII LFT46_12110 PF10502 Signal peptidase, peptidase S26 LFT46_12115 PF10502 Signal peptidase, peptidase S26 LFT46_12120 PF01245 Ribosomal protein L19 LFT46_12125 PF01746 tRNA (Guanine-1)-methyltransferase LFT46_12130 PF01782 RimM N-terminal domain LFT46_12140 PF00886 Ribosomal protein S16 LFT46_12150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT46_12155 PF01979 Amidohydrolase family LFT46_12160 PF13667 ThiC-associated domain LFT46_12160 PF01964 Radical SAM ThiC family LFT46_12170 PF00448 SRP54-type protein, GTPase domain LFT46_12170 PF02881 SRP54-type protein, helical bundle domain LFT46_12170 PF02978 Signal peptide binding domain LFT46_12175 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFT46_12175 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFT46_12180 PF00665 Integrase core domain LFT46_12185 PF00543 Nitrogen regulatory protein P-II LFT46_12190 PF00909 Ammonium Transporter Family LFT46_12195 PF00083 Sugar (and other) transporter LFT46_12195 PF07690 Major Facilitator Superfamily LFT46_12200 PF02881 SRP54-type protein, helical bundle domain LFT46_12200 PF00448 SRP54-type protein, GTPase domain LFT46_12205 PF06470 SMC proteins Flexible Hinge Domain LFT46_12205 PF02463 RecF/RecN/SMC N terminal domain LFT46_12210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFT46_12210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFT46_12215 PF00501 AMP-binding enzyme LFT46_12220 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LFT46_12225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFT46_12225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT46_12225 PF06827 Zinc finger found in FPG and IleRS LFT46_12230 PF00035 Double-stranded RNA binding motif LFT46_12230 PF14622 Ribonuclease-III-like LFT46_12235 PF01783 Ribosomal L32p protein family LFT46_12240 PF02620 Large ribosomal RNA subunit accumulation protein YceD LFT46_12245 PF01467 Cytidylyltransferase-like LFT46_12250 PF00155 Aminotransferase class I and II LFT46_12265 PF00271 Helicase conserved C-terminal domain LFT46_12265 PF17191 RecG wedge domain LFT46_12265 PF00270 DEAD/DEAH box helicase LFT46_12270 PF13684 Dihydroxyacetone kinase family LFT46_12270 PF02734 DAK2 domain LFT46_12275 PF00586 AIR synthase related protein, N-terminal domain LFT46_12275 PF02769 AIR synthase related protein, C-terminal domain LFT46_12285 PF07478 D-ala D-ala ligase C-terminus LFT46_12285 PF01820 D-ala D-ala ligase N-terminus LFT46_12290 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LFT46_12290 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LFT46_12295 PF01553 Acyltransferase LFT46_12300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFT46_12305 PF00694 Aconitase C-terminal domain LFT46_12310 PF00330 Aconitase family (aconitate hydratase) LFT46_12315 PF09339 IclR helix-turn-helix domain LFT46_12315 PF01614 Bacterial transcriptional regulator LFT46_12325 PF01926 50S ribosome-binding GTPase LFT46_12355 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFT46_12360 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT46_12365 PF16123 Hydroxyacylglutathione hydrolase C-terminus LFT46_12365 PF00753 Metallo-beta-lactamase superfamily LFT46_12375 PF01063 Amino-transferase class IV LFT46_12380 PF00180 Isocitrate/isopropylmalate dehydrogenase LFT46_12385 PF09334 tRNA synthetases class I (M) LFT46_12390 PF00005 ABC transporter LFT46_12390 PF02687 FtsX-like permease family LFT46_12390 PF12704 MacB-like periplasmic core domain LFT46_12400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT46_12400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT46_12400 PF01842 ACT domain LFT46_12405 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LFT46_12405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LFT46_12410 PF10369 Small subunit of acetolactate synthase LFT46_12415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_12415 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_12415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_12420 PF00920 Dehydratase family LFT46_12425 PF00573 Ribosomal protein L4/L1 family LFT46_12430 PF07995 Glucose / Sorbosone dehydrogenase LFT46_12445 PF00578 AhpC/TSA family LFT46_12455 PF02469 Fasciclin domain LFT46_12460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT46_12465 PF06039 Malate:quinone oxidoreductase (Mqo) LFT46_12470 PF00873 AcrB/AcrD/AcrF family LFT46_12475 PF00296 Luciferase-like monooxygenase LFT46_12480 PF01047 MarR family LFT46_12485 PF08379 Bacterial transglutaminase-like N-terminal region LFT46_12485 PF01841 Transglutaminase-like superfamily LFT46_12505 PF00266 Aminotransferase class-V LFT46_12510 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFT46_12510 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LFT46_12515 PF00890 FAD binding domain LFT46_12515 PF02910 Fumarate reductase flavoprotein C-term LFT46_12520 PF02445 Quinolinate synthetase A protein LFT46_12525 PF00293 NUDIX domain LFT46_12530 PF00324 Amino acid permease LFT46_12535 PF00561 alpha/beta hydrolase fold LFT46_12535 PF00364 Biotin-requiring enzyme LFT46_12540 PF05139 Erythromycin esterase LFT46_12540 PF00156 Phosphoribosyl transferase domain LFT46_12545 PF00083 Sugar (and other) transporter LFT46_12545 PF07690 Major Facilitator Superfamily LFT46_12550 PF09339 IclR helix-turn-helix domain LFT46_12550 PF01614 Bacterial transcriptional regulator LFT46_12560 PF13476 AAA domain LFT46_12565 PF12320 Type 5 capsule protein repressor C-terminal domain LFT46_12565 PF00149 Calcineurin-like phosphoesterase LFT46_12570 PF00230 Major intrinsic protein LFT46_12590 PF09335 SNARE associated Golgi protein LFT46_12595 PF01725 Ham1 family LFT46_12600 PF03725 3' exoribonuclease family, domain 2 LFT46_12600 PF01138 3' exoribonuclease family, domain 1 LFT46_12605 PF12706 Beta-lactamase superfamily domain LFT46_12605 PF00753 Metallo-beta-lactamase superfamily LFT46_12610 PF01177 Asp/Glu/Hydantoin racemase LFT46_12620 PF02617 ATP-dependent Clp protease adaptor protein ClpS LFT46_12625 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LFT46_12625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFT46_12630 PF00857 Isochorismatase family LFT46_12635 PF04851 Type III restriction enzyme, res subunit LFT46_12645 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFT46_12655 PF13732 Domain of unknown function (DUF4162) LFT46_12655 PF00005 ABC transporter LFT46_12660 PF00999 Sodium/hydrogen exchanger family LFT46_12670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFT46_12685 PF01594 AI-2E family transporter LFT46_12700 PF01939 Endonuclease NucS LFT46_12705 PF00313 'Cold-shock' DNA-binding domain LFT46_12710 PF09924 Uncharacterised conserved protein (DUF2156) LFT46_12715 PF00756 Putative esterase LFT46_12725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LFT46_12730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFT46_12730 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFT46_12735 PF00231 ATP synthase LFT46_12740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFT46_12740 PF00306 ATP synthase alpha/beta chain, C terminal domain LFT46_12740 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFT46_12745 PF00213 ATP synthase delta (OSCP) subunit LFT46_12750 PF00430 ATP synthase B/B' CF(0) LFT46_12755 PF00137 ATP synthase subunit C LFT46_12760 PF00119 ATP synthase A chain LFT46_12775 PF00953 Glycosyl transferase family 4 LFT46_12790 PF01300 Telomere recombination LFT46_12795 PF13649 Methyltransferase domain LFT46_12795 PF17827 PrmC N-terminal domain LFT46_12800 PF03462 PCRF domain LFT46_12800 PF00472 RF-1 domain LFT46_12805 PF07497 Rho termination factor, RNA-binding domain LFT46_12805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFT46_12805 PF07498 Rho termination factor, N-terminal domain LFT46_12810 PF00288 GHMP kinases N terminal domain LFT46_12815 PF00291 Pyridoxal-phosphate dependent enzyme LFT46_12820 PF03447 Homoserine dehydrogenase, NAD binding domain LFT46_12820 PF00742 Homoserine dehydrogenase LFT46_12820 PF01842 ACT domain LFT46_12825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFT46_12825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFT46_12830 PF03485 Arginyl tRNA synthetase N terminal domain LFT46_12830 PF05746 DALR anticodon binding domain LFT46_12830 PF00750 tRNA synthetases class I (R) LFT46_12845 PF00970 Oxidoreductase FAD-binding domain LFT46_12845 PF00042 Globin LFT46_12845 PF00175 Oxidoreductase NAD-binding domain LFT46_12860 PF02868 Thermolysin metallopeptidase, alpha-helical domain LFT46_12860 PF01447 Thermolysin metallopeptidase, catalytic domain LFT46_12860 PF16485 Protealysin propeptide LFT46_12870 PF04408 Helicase associated domain (HA2) LFT46_12870 PF00271 Helicase conserved C-terminal domain LFT46_12870 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LFT46_12870 PF11898 Domain of unknown function (DUF3418) LFT46_12870 PF00270 DEAD/DEAH box helicase LFT46_12875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFT46_12875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFT46_12880 PF01230 HIT domain LFT46_12885 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_12885 PF00107 Zinc-binding dehydrogenase LFT46_12890 PF00581 Rhodanese-like domain LFT46_12895 PF00291 Pyridoxal-phosphate dependent enzyme LFT46_12905 PF01475 Ferric uptake regulator family LFT46_12915 PF00005 ABC transporter LFT46_12920 PF01297 Zinc-uptake complex component A periplasmic LFT46_12925 PF01595 Cyclin M transmembrane N-terminal domain LFT46_12925 PF00571 CBS domain LFT46_12930 PF00571 CBS domain LFT46_12930 PF03471 Transporter associated domain LFT46_12930 PF01595 Cyclin M transmembrane N-terminal domain LFT46_12935 PF16078 2-oxoglutarate dehydrogenase N-terminus LFT46_12935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT46_12935 PF00676 Dehydrogenase E1 component LFT46_12935 PF16870 2-oxoglutarate dehydrogenase C-terminal LFT46_12935 PF02779 Transketolase, pyrimidine binding domain LFT46_12960 PF04542 Sigma-70 region 2 LFT46_12960 PF08281 Sigma-70, region 4 LFT46_12970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFT46_12975 PF03193 RsgA GTPase LFT46_12980 PF00459 Inositol monophosphatase family LFT46_12985 PF00266 Aminotransferase class-V LFT46_12990 PF08241 Methyltransferase domain LFT46_13000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LFT46_13005 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LFT46_13015 PF13180 PDZ domain LFT46_13025 PF00107 Zinc-binding dehydrogenase LFT46_13025 PF13823 Alcohol dehydrogenase GroES-associated LFT46_13025 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_13040 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_13045 PF00365 Phosphofructokinase LFT46_13050 PF03632 Glycosyl hydrolase family 65 central catalytic domain LFT46_13050 PF03636 Glycosyl hydrolase family 65, N-terminal domain LFT46_13050 PF03633 Glycosyl hydrolase family 65, C-terminal domain LFT46_13050 PF02358 Trehalose-phosphatase LFT46_13060 PF01757 Acyltransferase family LFT46_13075 PF01668 SmpB protein LFT46_13080 PF01551 Peptidase family M23 LFT46_13085 PF18075 FtsX extracellular domain LFT46_13085 PF02687 FtsX-like permease family LFT46_13090 PF00005 ABC transporter LFT46_13095 PF03462 PCRF domain LFT46_13095 PF00472 RF-1 domain LFT46_13130 PF00437 Type II/IV secretion system protein LFT46_13140 PF01183 Glycosyl hydrolases family 25 LFT46_13145 PF00483 Nucleotidyl transferase LFT46_13150 PF16363 GDP-mannose 4,6 dehydratase LFT46_13155 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LFT46_13160 PF00535 Glycosyl transferase family 2 LFT46_13180 PF00535 Glycosyl transferase family 2 LFT46_13200 PF00005 ABC transporter LFT46_13200 PF14524 Wzt C-terminal domain LFT46_13205 PF01061 ABC-2 type transporter LFT46_13210 PF17994 Galactofuranosyltransferase 2 N-terminal LFT46_13215 PF03275 UDP-galactopyranose mutase LFT46_13220 PF01580 FtsK/SpoIIIE family LFT46_13220 PF12538 DNA transporter LFT46_13230 PF02467 Transcription factor WhiB LFT46_13235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_13235 PF12282 Signal transduction histidine kinase LFT46_13235 PF07568 Histidine kinase LFT46_13240 PF05088 Bacterial NAD-glutamate dehydrogenase LFT46_13275 PF07517 SecA DEAD-like domain LFT46_13275 PF01043 SecA preprotein cross-linking domain LFT46_13275 PF07516 SecA Wing and Scaffold domain LFT46_13280 PF06224 Winged helix DNA-binding domain LFT46_13285 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LFT46_13285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LFT46_13295 PF10647 Lipoprotein LpqB beta-propeller domain LFT46_13295 PF10646 Sporulation and spore germination LFT46_13300 PF00512 His Kinase A (phospho-acceptor) domain LFT46_13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_13300 PF00672 HAMP domain LFT46_13305 PF00486 Transcriptional regulatory protein, C terminal LFT46_13305 PF00072 Response regulator receiver domain LFT46_13325 PF07726 ATPase family associated with various cellular activities (AAA) LFT46_13325 PF17863 AAA lid domain LFT46_13350 PF00005 ABC transporter LFT46_13350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT46_13355 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT46_13355 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13360 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13375 PF00266 Aminotransferase class-V LFT46_13395 PF00684 DnaJ central domain LFT46_13395 PF01556 DnaJ C terminal domain LFT46_13395 PF00226 DnaJ domain LFT46_13400 PF00588 SpoU rRNA Methylase family LFT46_13405 PF04542 Sigma-70 region 2 LFT46_13405 PF04545 Sigma-70, region 4 LFT46_13415 PF02585 GlcNAc-PI de-N-acetylase LFT46_13420 PF01012 Electron transfer flavoprotein domain LFT46_13420 PF00766 Electron transfer flavoprotein FAD-binding domain LFT46_13425 PF01012 Electron transfer flavoprotein domain LFT46_13430 PF13180 PDZ domain LFT46_13435 PF04536 TPM domain LFT46_13440 PF04012 PspA/IM30 family LFT46_13445 PF03441 FAD binding domain of DNA photolyase LFT46_13445 PF00875 DNA photolyase LFT46_13465 PF03699 Uncharacterised protein family (UPF0182) LFT46_13485 PF13361 UvrD-like helicase C-terminal domain LFT46_13485 PF00580 UvrD/REP helicase N-terminal domain LFT46_13485 PF00570 HRDC domain LFT46_13490 PF09297 NADH pyrophosphatase zinc ribbon domain LFT46_13490 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LFT46_13490 PF00293 NUDIX domain LFT46_13500 PF00580 UvrD/REP helicase N-terminal domain LFT46_13500 PF13361 UvrD-like helicase C-terminal domain LFT46_13505 PF13361 UvrD-like helicase C-terminal domain LFT46_13505 PF12705 PD-(D/E)XK nuclease superfamily LFT46_13505 PF00580 UvrD/REP helicase N-terminal domain LFT46_13520 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT46_13525 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13530 PF00005 ABC transporter LFT46_13535 PF00202 Aminotransferase class-III LFT46_13540 PF00296 Luciferase-like monooxygenase LFT46_13545 PF00490 Delta-aminolevulinic acid dehydratase LFT46_13555 PF03900 Porphobilinogen deaminase, C-terminal domain LFT46_13555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LFT46_13560 PF00762 Ferrochelatase LFT46_13565 PF06778 Chlorite dismutase LFT46_13580 PF01208 Uroporphyrinogen decarboxylase (URO-D) LFT46_13585 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LFT46_13585 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LFT46_13585 PF01488 Shikimate / quinate 5-dehydrogenase LFT46_13590 PF00899 ThiF family LFT46_13590 PF00581 Rhodanese-like domain LFT46_13610 PF05690 Thiazole biosynthesis protein ThiG LFT46_13620 PF01266 FAD dependent oxidoreductase LFT46_13625 PF02581 Thiamine monophosphate synthase LFT46_13630 PF00773 RNB domain LFT46_13630 PF00575 S1 RNA binding domain LFT46_13630 PF08206 Ribonuclease B OB domain LFT46_13635 PF00270 DEAD/DEAH box helicase LFT46_13635 PF00271 Helicase conserved C-terminal domain LFT46_13640 PF01555 DNA methylase LFT46_13645 PF02811 PHP domain LFT46_13650 PF05195 Aminopeptidase P, N-terminal domain LFT46_13650 PF00557 Metallopeptidase family M24 LFT46_13660 PF00571 CBS domain LFT46_13660 PF01769 Divalent cation transporter LFT46_13660 PF03448 MgtE intracellular N domain LFT46_13670 PF10609 NUBPL iron-transfer P-loop NTPase LFT46_13670 PF01883 Iron-sulfur cluster assembly protein LFT46_13675 PF02416 mttA/Hcf106 family LFT46_13685 PF04542 Sigma-70 region 2 LFT46_13685 PF08281 Sigma-70, region 4 LFT46_13690 PF01596 O-methyltransferase LFT46_13710 PF03641 Possible lysine decarboxylase LFT46_13715 PF00005 ABC transporter LFT46_13720 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT46_13725 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13730 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13735 PF01546 Peptidase family M20/M25/M40 LFT46_13735 PF07687 Peptidase dimerisation domain LFT46_13740 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LFT46_13740 PF14602 Hexapeptide repeat of succinyl-transferase LFT46_13755 PF13977 BetI-type transcriptional repressor, C-terminal LFT46_13755 PF00440 Bacterial regulatory proteins, tetR family LFT46_13760 PF16363 GDP-mannose 4,6 dehydratase LFT46_13765 PF00285 Citrate synthase, C-terminal domain LFT46_13770 PF00155 Aminotransferase class I and II LFT46_13775 PF00037 4Fe-4S binding domain LFT46_13785 PF00679 Elongation factor G C-terminus LFT46_13785 PF14492 Elongation Factor G, domain II LFT46_13785 PF03144 Elongation factor Tu domain 2 LFT46_13785 PF00009 Elongation factor Tu GTP binding domain LFT46_13795 PF00005 ABC transporter LFT46_13795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT46_13800 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13800 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT46_13805 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT46_13825 PF00364 Biotin-requiring enzyme LFT46_13825 PF00561 alpha/beta hydrolase fold LFT46_13830 PF06071 Protein of unknown function (DUF933) LFT46_13830 PF01926 50S ribosome-binding GTPase LFT46_13835 PF02646 RmuC family LFT46_13840 PF02401 LytB protein LFT46_13850 PF02601 Exonuclease VII, large subunit LFT46_13850 PF13742 OB-fold nucleic acid binding domain LFT46_13855 PF02609 Exonuclease VII small subunit LFT46_13860 PF03976 Polyphosphate kinase 2 (PPK2) LFT46_13865 PF00155 Aminotransferase class I and II LFT46_13875 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13880 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_13885 PF00005 ABC transporter LFT46_13885 PF00571 CBS domain LFT46_13890 PF05726 Pirin C-terminal cupin domain LFT46_13890 PF02678 Pirin LFT46_13895 PF01869 BadF/BadG/BcrA/BcrD ATPase family LFT46_13900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_13900 PF03466 LysR substrate binding domain LFT46_13905 PF07690 Major Facilitator Superfamily LFT46_13910 PF01037 Lrp/AsnC ligand binding domain LFT46_13925 PF01544 CorA-like Mg2+ transporter protein LFT46_13955 PF00483 Nucleotidyl transferase LFT46_13960 PF01812 5-formyltetrahydrofolate cyclo-ligase family LFT46_13980 PF02540 NAD synthase LFT46_13980 PF00117 Glutamine amidotransferase class-I LFT46_13980 PF00958 GMP synthase C terminal domain LFT46_14000 PF01266 FAD dependent oxidoreductase LFT46_14000 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LFT46_14005 PF00478 IMP dehydrogenase / GMP reductase domain LFT46_14015 PF00005 ABC transporter LFT46_14025 PF00571 CBS domain LFT46_14025 PF00478 IMP dehydrogenase / GMP reductase domain LFT46_14030 PF01757 Acyltransferase family LFT46_14035 PF01757 Acyltransferase family LFT46_14045 PF04679 ATP dependent DNA ligase C terminal region LFT46_14045 PF01068 ATP dependent DNA ligase domain LFT46_14045 PF04675 DNA ligase N terminus LFT46_14055 PF00118 TCP-1/cpn60 chaperonin family LFT46_14060 PF00166 Chaperonin 10 Kd subunit LFT46_14070 PF18096 THUMP domain-like LFT46_14075 PF08501 Shikimate dehydrogenase substrate binding domain LFT46_14080 PF00933 Glycosyl hydrolase family 3 N terminal domain LFT46_14085 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFT46_14095 PF00814 Glycoprotease family LFT46_14105 PF00814 Glycoprotease family LFT46_14110 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LFT46_14115 PF00842 Alanine racemase, C-terminal domain LFT46_14115 PF01168 Alanine racemase, N-terminal domain LFT46_14125 PF02056 Family 4 glycosyl hydrolase LFT46_14125 PF11975 Family 4 glycosyl hydrolase C-terminal domain LFT46_14130 PF13439 Glycosyltransferase Family 4 LFT46_14130 PF00534 Glycosyl transferases group 1 LFT46_14135 PF01268 Formate--tetrahydrofolate ligase LFT46_14145 PF01658 Myo-inositol-1-phosphate synthase LFT46_14150 PF00248 Aldo/keto reductase family LFT46_14155 PF11941 Domain of unknown function (DUF3459) LFT46_14155 PF00128 Alpha amylase, catalytic domain LFT46_14160 PF00128 Alpha amylase, catalytic domain LFT46_14165 PF00128 Alpha amylase, catalytic domain LFT46_14165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFT46_14170 PF01256 Carbohydrate kinase LFT46_14170 PF03853 YjeF-related protein N-terminus LFT46_14175 PF01648 4'-phosphopantetheinyl transferase superfamily LFT46_14185 PF01380 SIS domain LFT46_14190 PF00485 Phosphoribulokinase / Uridine kinase family LFT46_14195 PF02557 D-alanyl-D-alanine carboxypeptidase LFT46_14200 PF01741 Large-conductance mechanosensitive channel, MscL LFT46_14205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFT46_14205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFT46_14205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFT46_14205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFT46_14210 PF00380 Ribosomal protein S9/S16 LFT46_14215 PF00572 Ribosomal protein L13 LFT46_14245 PF10609 NUBPL iron-transfer P-loop NTPase LFT46_14250 PF00437 Type II/IV secretion system protein LFT46_14285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFT46_14290 PF00437 Type II/IV secretion system protein LFT46_14310 PF00486 Transcriptional regulatory protein, C terminal LFT46_14310 PF00072 Response regulator receiver domain LFT46_14315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_14315 PF00512 His Kinase A (phospho-acceptor) domain LFT46_14315 PF13426 PAS domain LFT46_14315 PF00672 HAMP domain LFT46_14320 PF01416 tRNA pseudouridine synthase LFT46_14325 PF01196 Ribosomal protein L17 LFT46_14330 PF01000 RNA polymerase Rpb3/RpoA insert domain LFT46_14330 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LFT46_14330 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LFT46_14335 PF00411 Ribosomal protein S11 LFT46_14340 PF00416 Ribosomal protein S13/S18 LFT46_14345 PF00444 Ribosomal protein L36 LFT46_14350 PF01176 Translation initiation factor 1A / IF-1 LFT46_14355 PF03576 Peptidase family S58 LFT46_14360 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_14365 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_14370 PF13416 Bacterial extracellular solute-binding protein LFT46_14375 PF00557 Metallopeptidase family M24 LFT46_14385 PF00344 SecY translocase LFT46_14390 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LFT46_14395 PF00327 Ribosomal protein L30p/L7e LFT46_14400 PF00333 Ribosomal protein S5, N-terminal domain LFT46_14400 PF03719 Ribosomal protein S5, C-terminal domain LFT46_14405 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LFT46_14410 PF00347 Ribosomal protein L6 LFT46_14415 PF00410 Ribosomal protein S8 LFT46_14420 PF00673 ribosomal L5P family C-terminus LFT46_14420 PF00281 Ribosomal protein L5 LFT46_14425 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LFT46_14430 PF00238 Ribosomal protein L14p/L23e LFT46_14435 PF00366 Ribosomal protein S17 LFT46_14445 PF00252 Ribosomal protein L16p/L10e LFT46_14450 PF07650 KH domain LFT46_14450 PF00189 Ribosomal protein S3, C-terminal domain LFT46_14455 PF00237 Ribosomal protein L22p/L17e LFT46_14460 PF00203 Ribosomal protein S19 LFT46_14465 PF03947 Ribosomal Proteins L2, C-terminal domain LFT46_14465 PF00181 Ribosomal Proteins L2, RNA binding domain LFT46_14470 PF00276 Ribosomal protein L23 LFT46_14475 PF00573 Ribosomal protein L4/L1 family LFT46_14480 PF00297 Ribosomal protein L3 LFT46_14485 PF00338 Ribosomal protein S10p/S20e LFT46_14490 PF00232 Glycosyl hydrolase family 1 LFT46_14495 PF01566 Natural resistance-associated macrophage protein LFT46_14495 PF03358 NADPH-dependent FMN reductase LFT46_14500 PF00009 Elongation factor Tu GTP binding domain LFT46_14500 PF03144 Elongation factor Tu domain 2 LFT46_14500 PF03143 Elongation factor Tu C-terminal domain LFT46_14505 PF03144 Elongation factor Tu domain 2 LFT46_14505 PF00679 Elongation factor G C-terminus LFT46_14505 PF14492 Elongation Factor G, domain II LFT46_14505 PF03764 Elongation factor G, domain IV LFT46_14505 PF00009 Elongation factor Tu GTP binding domain LFT46_14510 PF00177 Ribosomal protein S7p/S5e LFT46_14515 PF00164 Ribosomal protein S12/S23 LFT46_14520 PF04997 RNA polymerase Rpb1, domain 1 LFT46_14520 PF05000 RNA polymerase Rpb1, domain 4 LFT46_14520 PF04998 RNA polymerase Rpb1, domain 5 LFT46_14520 PF04983 RNA polymerase Rpb1, domain 3 LFT46_14520 PF00623 RNA polymerase Rpb1, domain 2 LFT46_14525 PF04560 RNA polymerase Rpb2, domain 7 LFT46_14525 PF04563 RNA polymerase beta subunit LFT46_14525 PF04561 RNA polymerase Rpb2, domain 2 LFT46_14525 PF04565 RNA polymerase Rpb2, domain 3 LFT46_14525 PF10385 RNA polymerase beta subunit external 1 domain LFT46_14525 PF00562 RNA polymerase Rpb2, domain 6 LFT46_14535 PF02803 Thiolase, C-terminal domain LFT46_14535 PF00108 Thiolase, N-terminal domain LFT46_14540 PF03129 Anticodon binding domain LFT46_14540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT46_14540 PF04073 Aminoacyl-tRNA editing domain LFT46_14545 PF00542 Ribosomal protein L7/L12 C-terminal domain LFT46_14545 PF16320 Ribosomal protein L7/L12 dimerisation domain LFT46_14550 PF00466 Ribosomal protein L10 LFT46_14565 PF00687 Ribosomal protein L1p/L10e family LFT46_14570 PF03946 Ribosomal protein L11, N-terminal domain LFT46_14570 PF00298 Ribosomal protein L11, RNA binding domain LFT46_14575 PF02357 Transcription termination factor nusG LFT46_14580 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LFT46_14590 PF00155 Aminotransferase class I and II LFT46_14595 PF00196 Bacterial regulatory proteins, luxR family LFT46_14595 PF00072 Response regulator receiver domain LFT46_14620 PF00365 Phosphofructokinase LFT46_14630 PF07690 Major Facilitator Superfamily LFT46_14640 PF01571 Aminomethyltransferase folate-binding domain LFT46_14640 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT46_14645 PF08768 Domain of unknown function (DUF1794) LFT46_14655 PF00486 Transcriptional regulatory protein, C terminal LFT46_14660 PF00583 Acetyltransferase (GNAT) family LFT46_14665 PF13089 Polyphosphate kinase N-terminal domain LFT46_14665 PF02503 Polyphosphate kinase middle domain LFT46_14665 PF13090 Polyphosphate kinase C-terminal domain 2 LFT46_14665 PF17941 Polyphosphate kinase C-terminal domain 1 LFT46_14670 PF00293 NUDIX domain LFT46_14670 PF00300 Histidine phosphatase superfamily (branch 1) LFT46_14680 PF00303 Thymidylate synthase LFT46_14685 PF00186 Dihydrofolate reductase LFT46_14710 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFT46_14710 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFT46_14725 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LFT46_14725 PF01565 FAD binding domain LFT46_14730 PF07690 Major Facilitator Superfamily LFT46_14740 PF13452 N-terminal half of MaoC dehydratase LFT46_14760 PF00248 Aldo/keto reductase family LFT46_14765 PF00128 Alpha amylase, catalytic domain LFT46_14770 PF00480 ROK family LFT46_14775 PF13460 NAD(P)H-binding LFT46_14785 PF13247 4Fe-4S dicluster domain LFT46_14785 PF14711 Respiratory nitrate reductase beta C-terminal LFT46_14790 PF00384 Molybdopterin oxidoreductase LFT46_14790 PF02613 Nitrate reductase delta subunit LFT46_14790 PF02665 Nitrate reductase gamma subunit LFT46_14795 PF02665 Nitrate reductase gamma subunit LFT46_14795 PF02613 Nitrate reductase delta subunit LFT46_14795 PF00384 Molybdopterin oxidoreductase LFT46_14800 PF07690 Major Facilitator Superfamily LFT46_14810 PF02096 60Kd inner membrane protein LFT46_14825 PF03880 DbpA RNA binding domain LFT46_14825 PF00270 DEAD/DEAH box helicase LFT46_14825 PF00271 Helicase conserved C-terminal domain LFT46_14840 PF03738 Glutathionylspermidine synthase preATP-grasp LFT46_14845 PF13520 Amino acid permease LFT46_14850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_14850 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_14850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_14865 PF01638 HxlR-like helix-turn-helix LFT46_14870 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT46_14875 PF00571 CBS domain LFT46_14875 PF00291 Pyridoxal-phosphate dependent enzyme LFT46_14880 PF02040 Arsenical pump membrane protein LFT46_14900 PF00501 AMP-binding enzyme LFT46_14900 PF13193 AMP-binding enzyme C-terminal domain LFT46_14910 PF00085 Thioredoxin LFT46_14930 PF00571 CBS domain LFT46_14945 PF04461 Protein of unknown function (DUF520) LFT46_14950 PF03239 Iron permease FTR1 family LFT46_14955 PF13473 Cupredoxin-like domain LFT46_14955 PF09375 Imelysin LFT46_14960 PF04261 Dyp-type peroxidase family LFT46_14960 PF10518 TAT (twin-arginine translocation) pathway signal sequence LFT46_14965 PF01435 Peptidase family M48 LFT46_14975 PF01475 Ferric uptake regulator family LFT46_14980 PF00199 Catalase LFT46_14980 PF06628 Catalase-related immune-responsive LFT46_14990 PF13520 Amino acid permease LFT46_15000 PF00171 Aldehyde dehydrogenase family LFT46_15010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_15020 PF00892 EamA-like transporter family LFT46_15025 PF00202 Aminotransferase class-III LFT46_15030 PF00171 Aldehyde dehydrogenase family LFT46_15035 PF17853 GGDEF-like domain LFT46_15035 PF13556 PucR C-terminal helix-turn-helix domain LFT46_15035 PF05651 Putative sugar diacid recognition LFT46_15040 PF05235 CHAD domain LFT46_15040 PF01928 CYTH domain LFT46_15050 PF00392 Bacterial regulatory proteins, gntR family LFT46_15050 PF07729 FCD domain LFT46_15075 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_15080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFT46_15080 PF10414 Sirohaem synthase dimerisation region LFT46_15080 PF14824 Sirohaem biosynthesis protein central LFT46_15095 PF00005 ABC transporter LFT46_15105 PF01139 tRNA-splicing ligase RtcB LFT46_15115 PF00009 Elongation factor Tu GTP binding domain LFT46_15120 PF01507 Phosphoadenosine phosphosulfate reductase family LFT46_15125 PF01507 Phosphoadenosine phosphosulfate reductase family LFT46_15130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFT46_15130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFT46_15140 PF03458 UPF0126 domain LFT46_15160 PF00348 Polyprenyl synthetase LFT46_15165 PF01494 FAD binding domain LFT46_15170 PF01209 ubiE/COQ5 methyltransferase family LFT46_15175 PF00425 chorismate binding enzyme LFT46_15180 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT46_15185 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_15190 PF00005 ABC transporter LFT46_15195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_15195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_15210 PF13378 Enolase C-terminal domain-like LFT46_15210 PF18374 Enolase N-terminal domain-like LFT46_15215 PF01566 Natural resistance-associated macrophage protein LFT46_15220 PF01544 CorA-like Mg2+ transporter protein LFT46_15235 PF00005 ABC transporter LFT46_15235 PF13732 Domain of unknown function (DUF4162) LFT46_15255 PF00440 Bacterial regulatory proteins, tetR family LFT46_15310 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_15315 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFT46_15340 PF07690 Major Facilitator Superfamily LFT46_15345 PF01098 Cell cycle protein LFT46_15350 PF03816 Cell envelope-related transcriptional attenuator domain LFT46_15350 PF13399 LytR cell envelope-related transcriptional attenuator LFT46_15355 PF01022 Bacterial regulatory protein, arsR family LFT46_15365 PF01545 Cation efflux family LFT46_15370 PF01757 Acyltransferase family LFT46_15380 PF05506 Domain of unknown function (DUF756) LFT46_15380 PF04185 Phosphoesterase family LFT46_15390 PF01494 FAD binding domain LFT46_15395 PF00082 Subtilase family LFT46_15395 PF04151 Bacterial pre-peptidase C-terminal domain LFT46_15410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT46_15415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT46_15415 PF00364 Biotin-requiring enzyme LFT46_15415 PF02817 e3 binding domain LFT46_15420 PF02780 Transketolase, C-terminal domain LFT46_15420 PF02779 Transketolase, pyrimidine binding domain LFT46_15425 PF00676 Dehydrogenase E1 component LFT46_15430 PF01037 Lrp/AsnC ligand binding domain LFT46_15455 PF02416 mttA/Hcf106 family LFT46_15465 PF00912 Transglycosylase LFT46_15465 PF00905 Penicillin binding protein transpeptidase domain LFT46_15500 PF03069 Acetamidase/Formamidase family LFT46_15505 PF00781 Diacylglycerol kinase catalytic domain LFT46_15510 PF00535 Glycosyl transferase family 2 LFT46_15515 PF00293 NUDIX domain LFT46_15520 PF00348 Polyprenyl synthetase LFT46_15530 PF01593 Flavin containing amine oxidoreductase LFT46_15540 PF01040 UbiA prenyltransferase family LFT46_15545 PF01040 UbiA prenyltransferase family LFT46_15560 PF08666 SAF domain LFT46_15560 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LFT46_15565 PF01842 ACT domain LFT46_15565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT46_15565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT46_15570 PF00701 Dihydrodipicolinate synthetase family LFT46_15575 PF00083 Sugar (and other) transporter LFT46_15580 PF01070 FMN-dependent dehydrogenase LFT46_15585 PF09339 IclR helix-turn-helix domain LFT46_15585 PF01614 Bacterial transcriptional regulator LFT46_15590 PF00171 Aldehyde dehydrogenase family LFT46_15610 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_15615 PF00005 ABC transporter LFT46_15620 PF01070 FMN-dependent dehydrogenase LFT46_15650 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFT46_15680 PF02397 Bacterial sugar transferase LFT46_15690 PF13439 Glycosyltransferase Family 4 LFT46_15690 PF00534 Glycosyl transferases group 1 LFT46_15715 PF01370 NAD dependent epimerase/dehydratase family LFT46_15720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFT46_15720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFT46_15720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFT46_15725 PF02350 UDP-N-acetylglucosamine 2-epimerase LFT46_15735 PF02719 Polysaccharide biosynthesis protein LFT46_15735 PF08485 Polysaccharide biosynthesis protein C-terminal LFT46_15740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFT46_15745 PF02719 Polysaccharide biosynthesis protein LFT46_15750 PF13614 AAA domain LFT46_15770 PF00483 Nucleotidyl transferase LFT46_15775 PF00378 Enoyl-CoA hydratase/isomerase LFT46_15780 PF00970 Oxidoreductase FAD-binding domain LFT46_15780 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT46_15780 PF00175 Oxidoreductase NAD-binding domain LFT46_15785 PF01883 Iron-sulfur cluster assembly protein LFT46_15790 PF05138 Phenylacetic acid catabolic protein LFT46_15795 PF06243 Phenylacetic acid degradation B LFT46_15800 PF05138 Phenylacetic acid catabolic protein LFT46_15810 PF00072 Response regulator receiver domain LFT46_15810 PF00196 Bacterial regulatory proteins, luxR family LFT46_15830 PF01569 PAP2 superfamily LFT46_15835 PF09335 SNARE associated Golgi protein LFT46_15840 PF00072 Response regulator receiver domain LFT46_15840 PF00486 Transcriptional regulatory protein, C terminal LFT46_15845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_15845 PF00512 His Kinase A (phospho-acceptor) domain LFT46_15855 PF00230 Major intrinsic protein LFT46_15870 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_15870 PF13823 Alcohol dehydrogenase GroES-associated LFT46_15870 PF00107 Zinc-binding dehydrogenase LFT46_15885 PF00501 AMP-binding enzyme LFT46_15885 PF13193 AMP-binding enzyme C-terminal domain LFT46_15885 PF00668 Condensation domain LFT46_15885 PF00550 Phosphopantetheine attachment site LFT46_15885 PF00391 PEP-utilising enzyme, mobile domain LFT46_15885 PF08241 Methyltransferase domain LFT46_15885 PF00975 Thioesterase domain LFT46_15905 PF00248 Aldo/keto reductase family LFT46_15910 PF00248 Aldo/keto reductase family LFT46_15915 PF00106 short chain dehydrogenase LFT46_15925 PF07731 Multicopper oxidase LFT46_15925 PF07732 Multicopper oxidase LFT46_15940 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFT46_15950 PF01022 Bacterial regulatory protein, arsR family LFT46_15955 PF00557 Metallopeptidase family M24 LFT46_15965 PF00583 Acetyltransferase (GNAT) family LFT46_15980 PF03649 Uncharacterised protein family (UPF0014) LFT46_15985 PF04264 YceI-like domain LFT46_16030 PF02583 Metal-sensitive transcriptional repressor LFT46_16035 PF00581 Rhodanese-like domain LFT46_16035 PF11127 Protein of unknown function (DUF2892) LFT46_16040 PF01925 Sulfite exporter TauE/SafE LFT46_16050 PF00581 Rhodanese-like domain LFT46_16055 PF00753 Metallo-beta-lactamase superfamily LFT46_16060 PF07690 Major Facilitator Superfamily LFT46_16075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT46_16075 PF00364 Biotin-requiring enzyme LFT46_16075 PF02817 e3 binding domain LFT46_16085 PF00676 Dehydrogenase E1 component LFT46_16090 PF00501 AMP-binding enzyme LFT46_16090 PF13193 AMP-binding enzyme C-terminal domain LFT46_16095 PF00156 Phosphoribosyl transferase domain LFT46_16095 PF05139 Erythromycin esterase LFT46_16100 PF01738 Dienelactone hydrolase family LFT46_16100 PF00156 Phosphoribosyl transferase domain LFT46_16120 PF04185 Phosphoesterase family LFT46_16125 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFT46_16170 PF00795 Carbon-nitrogen hydrolase LFT46_16180 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LFT46_16185 PF00115 Cytochrome C and Quinol oxidase polypeptide I LFT46_16195 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16200 PF08402 TOBE domain LFT46_16200 PF00005 ABC transporter LFT46_16210 PF06965 Na+/H+ antiporter 1 LFT46_16235 PF00403 Heavy-metal-associated domain LFT46_16255 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFT46_16260 PF03816 Cell envelope-related transcriptional attenuator domain LFT46_16265 PF03816 Cell envelope-related transcriptional attenuator domain LFT46_16275 PF00300 Histidine phosphatase superfamily (branch 1) LFT46_16280 PF01256 Carbohydrate kinase LFT46_16285 PF00011 Hsp20/alpha crystallin family LFT46_16295 PF01494 FAD binding domain LFT46_16305 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LFT46_16305 PF00326 Prolyl oligopeptidase family LFT46_16325 PF00871 Acetokinase family LFT46_16345 PF13936 Helix-turn-helix domain LFT46_16345 PF00665 Integrase core domain LFT46_16350 PF07085 DRTGG domain LFT46_16350 PF01515 Phosphate acetyl/butaryl transferase LFT46_16355 PF03061 Thioesterase superfamily LFT46_16360 PF00501 AMP-binding enzyme LFT46_16360 PF14535 AMP-binding enzyme C-terminal domain LFT46_16375 PF13180 PDZ domain LFT46_16390 PF00171 Aldehyde dehydrogenase family LFT46_16390 PF01575 MaoC like domain LFT46_16395 PF03061 Thioesterase superfamily LFT46_16415 PF13472 GDSL-like Lipase/Acylhydrolase family LFT46_16430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFT46_16430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFT46_16435 PF00378 Enoyl-CoA hydratase/isomerase LFT46_16440 PF02803 Thiolase, C-terminal domain LFT46_16440 PF00108 Thiolase, N-terminal domain LFT46_16455 PF00817 impB/mucB/samB family LFT46_16455 PF11799 impB/mucB/samB family C-terminal domain LFT46_16460 PF01738 Dienelactone hydrolase family LFT46_16465 PF00324 Amino acid permease LFT46_16470 PF02517 CPBP intramembrane metalloprotease LFT46_16480 PF00378 Enoyl-CoA hydratase/isomerase LFT46_16485 PF13193 AMP-binding enzyme C-terminal domain LFT46_16485 PF00501 AMP-binding enzyme LFT46_16490 PF01040 UbiA prenyltransferase family LFT46_16510 PF00350 Dynamin family LFT46_16515 PF00350 Dynamin family LFT46_16530 PF00012 Hsp70 protein LFT46_16535 PF01578 Cytochrome C assembly protein LFT46_16545 PF02683 Cytochrome C biogenesis protein transmembrane region LFT46_16550 PF00578 AhpC/TSA family LFT46_16555 PF00300 Histidine phosphatase superfamily (branch 1) LFT46_16560 PF04264 YceI-like domain LFT46_16570 PF02629 CoA binding domain LFT46_16570 PF06971 Putative DNA-binding protein N-terminus LFT46_16590 PF12728 Helix-turn-helix domain LFT46_16595 PF00793 DAHP synthetase I family LFT46_16605 PF05448 Acetyl xylan esterase (AXE1) LFT46_16610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT46_16610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT46_16615 PF00596 Class II Aldolase and Adducin N-terminal domain LFT46_16625 PF05336 L-rhamnose mutarotase LFT46_16630 PF00356 Bacterial regulatory proteins, lacI family LFT46_16645 PF09224 Domain of unknown function (DUF1961) LFT46_16650 PF13472 GDSL-like Lipase/Acylhydrolase family LFT46_16655 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16660 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16665 PF01547 Bacterial extracellular solute-binding protein LFT46_16670 PF04854 Protein of unknown function, DUF624 LFT46_16675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_16675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_16685 PF07690 Major Facilitator Superfamily LFT46_16695 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16700 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16710 PF08532 Beta-galactosidase trimerisation domain LFT46_16710 PF08533 Beta-galactosidase C-terminal domain LFT46_16710 PF02449 Beta-galactosidase LFT46_16720 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16725 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16750 PF00171 Aldehyde dehydrogenase family LFT46_16755 PF13378 Enolase C-terminal domain-like LFT46_16755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_16760 PF00701 Dihydrodipicolinate synthetase family LFT46_16770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_16770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_16775 PF00356 Bacterial regulatory proteins, lacI family LFT46_16780 PF01070 FMN-dependent dehydrogenase LFT46_16785 PF01022 Bacterial regulatory protein, arsR family LFT46_16790 PF00850 Histone deacetylase domain LFT46_16795 PF02386 Cation transport protein LFT46_16800 PF02080 TrkA-C domain LFT46_16800 PF02254 TrkA-N domain LFT46_16805 PF03807 NADP oxidoreductase coenzyme F420-dependent LFT46_16805 PF14748 Pyrroline-5-carboxylate reductase dimerisation LFT46_16810 PF02541 Ppx/GppA phosphatase family LFT46_16820 PF01751 Toprim domain LFT46_16820 PF01131 DNA topoisomerase LFT46_16820 PF13368 Topoisomerase C-terminal repeat LFT46_16825 PF05175 Methyltransferase small domain LFT46_16825 PF17827 PrmC N-terminal domain LFT46_16840 PF12368 Rhodanase C-terminal LFT46_16840 PF17773 UPF0176 acylphosphatase like domain LFT46_16850 PF00270 DEAD/DEAH box helicase LFT46_16850 PF09369 Domain of unknown function (DUF1998) LFT46_16850 PF00271 Helicase conserved C-terminal domain LFT46_16880 PF00437 Type II/IV secretion system protein LFT46_16890 PF01367 5'-3' exonuclease, C-terminal SAM fold LFT46_16890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFT46_16890 PF00476 DNA polymerase family A LFT46_16890 PF01612 3'-5' exonuclease LFT46_16900 PF00293 NUDIX domain LFT46_16905 PF00730 HhH-GPD superfamily base excision DNA repair protein LFT46_16905 PF00633 Helix-hairpin-helix motif LFT46_16905 PF10576 Iron-sulfur binding domain of endonuclease III LFT46_16915 PF16177 Acetyl-coenzyme A synthetase N-terminus LFT46_16915 PF13193 AMP-binding enzyme C-terminal domain LFT46_16915 PF00501 AMP-binding enzyme LFT46_16925 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16930 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16935 PF00455 DeoR C terminal sensor domain LFT46_16935 PF08220 DeoR-like helix-turn-helix domain LFT46_16945 PF00356 Bacterial regulatory proteins, lacI family LFT46_16950 PF08532 Beta-galactosidase trimerisation domain LFT46_16950 PF08533 Beta-galactosidase C-terminal domain LFT46_16950 PF02449 Beta-galactosidase LFT46_16955 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16960 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16965 PF01547 Bacterial extracellular solute-binding protein LFT46_16970 PF00356 Bacterial regulatory proteins, lacI family LFT46_16980 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16985 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_16995 PF16874 Glycosyl hydrolase family 36 C-terminal domain LFT46_16995 PF16875 Glycosyl hydrolase family 36 N-terminal domain LFT46_17000 PF01220 Dehydroquinase class II LFT46_17005 PF02674 Colicin V production protein LFT46_17010 PF00027 Cyclic nucleotide-binding domain LFT46_17010 PF13545 Crp-like helix-turn-helix domain LFT46_17015 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LFT46_17020 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_17025 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_17035 PF00356 Bacterial regulatory proteins, lacI family LFT46_17055 PF00912 Transglycosylase LFT46_17055 PF00905 Penicillin binding protein transpeptidase domain LFT46_17060 PF00149 Calcineurin-like phosphoesterase LFT46_17065 PF00664 ABC transporter transmembrane region LFT46_17065 PF00005 ABC transporter LFT46_17070 PF00005 ABC transporter LFT46_17070 PF00664 ABC transporter transmembrane region LFT46_17090 PF01259 SAICAR synthetase LFT46_17095 PF02844 Phosphoribosylglycinamide synthetase, N domain LFT46_17095 PF02843 Phosphoribosylglycinamide synthetase, C domain LFT46_17095 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LFT46_17115 PF00106 short chain dehydrogenase LFT46_17120 PF01177 Asp/Glu/Hydantoin racemase LFT46_17125 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT46_17130 PF00456 Transketolase, thiamine diphosphate binding domain LFT46_17130 PF17831 Pyruvate dehydrogenase E1 component middle domain LFT46_17135 PF12804 MobA-like NTP transferase domain LFT46_17155 PF00248 Aldo/keto reductase family LFT46_17160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LFT46_17160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LFT46_17170 PF13478 XdhC Rossmann domain LFT46_17170 PF02625 XdhC and CoxI family LFT46_17175 PF00860 Permease family LFT46_17180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFT46_17185 PF01979 Amidohydrolase family LFT46_17190 PF01068 ATP dependent DNA ligase domain LFT46_17190 PF13298 DNA polymerase Ligase (LigD) LFT46_17190 PF04679 ATP dependent DNA ligase C terminal region LFT46_17200 PF01014 Uricase LFT46_17205 PF00860 Permease family LFT46_17210 PF09339 IclR helix-turn-helix domain LFT46_17210 PF01614 Bacterial transcriptional regulator LFT46_17215 PF03949 Malic enzyme, NAD binding domain LFT46_17215 PF00390 Malic enzyme, N-terminal domain LFT46_17220 PF01274 Malate synthase LFT46_17230 PF07883 Cupin domain LFT46_17230 PF05899 Protein of unknown function (DUF861) LFT46_17235 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_17235 PF00107 Zinc-binding dehydrogenase LFT46_17235 PF13823 Alcohol dehydrogenase GroES-associated LFT46_17245 PF13419 Haloacid dehalogenase-like hydrolase LFT46_17255 PF00723 Glycosyl hydrolases family 15 LFT46_17270 PF00232 Glycosyl hydrolase family 1 LFT46_17280 PF00226 DnaJ domain LFT46_17280 PF01556 DnaJ C terminal domain LFT46_17280 PF00684 DnaJ central domain LFT46_17285 PF00011 Hsp20/alpha crystallin family LFT46_17290 PF13411 MerR HTH family regulatory protein LFT46_17300 PF05922 Peptidase inhibitor I9 LFT46_17300 PF00082 Subtilase family LFT46_17305 PF01370 NAD dependent epimerase/dehydratase family LFT46_17320 PF00072 Response regulator receiver domain LFT46_17320 PF00486 Transcriptional regulatory protein, C terminal LFT46_17325 PF00561 alpha/beta hydrolase fold LFT46_17330 PF01022 Bacterial regulatory protein, arsR family LFT46_17335 PF16916 Dimerisation domain of Zinc Transporter LFT46_17335 PF01545 Cation efflux family LFT46_17340 PF00487 Fatty acid desaturase LFT46_17345 PF00970 Oxidoreductase FAD-binding domain LFT46_17345 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT46_17345 PF00175 Oxidoreductase NAD-binding domain LFT46_17350 PF00296 Luciferase-like monooxygenase LFT46_17355 PF02656 Domain of unknown function (DUF202) LFT46_17360 PF02656 Domain of unknown function (DUF202) LFT46_17370 PF10944 Protein of unknown function (DUF2630) LFT46_17375 PF00795 Carbon-nitrogen hydrolase LFT46_17380 PF00909 Ammonium Transporter Family LFT46_17390 PF00905 Penicillin binding protein transpeptidase domain LFT46_17390 PF00912 Transglycosylase LFT46_17450 PF03060 Nitronate monooxygenase LFT46_17455 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_17455 PF00107 Zinc-binding dehydrogenase LFT46_17460 PF00107 Zinc-binding dehydrogenase LFT46_17460 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_17480 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_17485 PF00005 ABC transporter LFT46_17510 PF07690 Major Facilitator Superfamily LFT46_17515 PF05675 Protein of unknown function (DUF817) LFT46_17520 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LFT46_17535 PF00920 Dehydratase family LFT46_17545 PF01546 Peptidase family M20/M25/M40 LFT46_17545 PF07687 Peptidase dimerisation domain LFT46_17550 PF01522 Polysaccharide deacetylase LFT46_17560 PF17853 GGDEF-like domain LFT46_17560 PF13556 PucR C-terminal helix-turn-helix domain LFT46_17560 PF07905 Purine catabolism regulatory protein-like family LFT46_17570 PF01872 RibD C-terminal domain LFT46_17580 PF01321 Creatinase/Prolidase N-terminal domain LFT46_17580 PF00557 Metallopeptidase family M24 LFT46_17585 PF08946 Osmosensory transporter coiled coil LFT46_17585 PF00083 Sugar (and other) transporter LFT46_17590 PF00037 4Fe-4S binding domain LFT46_17595 PF00171 Aldehyde dehydrogenase family LFT46_17610 PF00378 Enoyl-CoA hydratase/isomerase LFT46_17615 PF02515 CoA-transferase family III LFT46_17620 PF17806 Sarcosine oxidase A3 domain LFT46_17620 PF01571 Aminomethyltransferase folate-binding domain LFT46_17620 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT46_17620 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_17625 PF00083 Sugar (and other) transporter LFT46_17630 PF01381 Helix-turn-helix LFT46_17630 PF07883 Cupin domain LFT46_17660 PF02586 SOS response associated peptidase (SRAP) LFT46_17680 PF01022 Bacterial regulatory protein, arsR family LFT46_17695 PF00544 Pectate lyase LFT46_17700 PF13472 GDSL-like Lipase/Acylhydrolase family LFT46_17710 PF13276 HTH-like domain LFT46_17710 PF00665 Integrase core domain LFT46_17710 PF13333 Integrase core domain LFT46_17740 PF00583 Acetyltransferase (GNAT) family LFT46_17745 PF03364 Polyketide cyclase / dehydrase and lipid transport LFT46_17765 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_17765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_17765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_17770 PF03466 LysR substrate binding domain LFT46_17775 PF02515 CoA-transferase family III LFT46_17785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_17785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_17785 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_17795 PF02803 Thiolase, C-terminal domain LFT46_17795 PF00108 Thiolase, N-terminal domain LFT46_17800 PF01575 MaoC like domain LFT46_17805 PF07690 Major Facilitator Superfamily LFT46_17805 PF00083 Sugar (and other) transporter LFT46_17815 PF00664 ABC transporter transmembrane region LFT46_17815 PF00005 ABC transporter LFT46_17820 PF00005 ABC transporter LFT46_17820 PF00664 ABC transporter transmembrane region LFT46_17825 PF07690 Major Facilitator Superfamily LFT46_17835 PF00141 Peroxidase LFT46_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_17840 PF01590 GAF domain LFT46_17840 PF08446 PAS fold LFT46_17840 PF00360 Phytochrome region LFT46_17840 PF00512 His Kinase A (phospho-acceptor) domain LFT46_17850 PF03992 Antibiotic biosynthesis monooxygenase LFT46_17860 PF00501 AMP-binding enzyme LFT46_17860 PF13193 AMP-binding enzyme C-terminal domain LFT46_17865 PF00072 Response regulator receiver domain LFT46_17865 PF00196 Bacterial regulatory proteins, luxR family LFT46_17870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_17870 PF07730 Histidine kinase LFT46_17870 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LFT46_17870 PF00672 HAMP domain LFT46_17880 PF00005 ABC transporter LFT46_17880 PF09383 NIL domain LFT46_17905 PF13492 GAF domain LFT46_17905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT46_17905 PF07730 Histidine kinase LFT46_17910 PF03358 NADPH-dependent FMN reductase LFT46_17925 PF01522 Polysaccharide deacetylase LFT46_17925 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain LFT46_17930 PF03364 Polyketide cyclase / dehydrase and lipid transport LFT46_17935 PF18370 Rhamnogalacturonan I lyases beta-sheet domain LFT46_17935 PF01839 FG-GAP repeat LFT46_17945 PF00155 Aminotransferase class I and II LFT46_17970 PF00291 Pyridoxal-phosphate dependent enzyme LFT46_17970 PF13291 ACT domain LFT46_17990 PF01979 Amidohydrolase family LFT46_18005 PF00665 Integrase core domain LFT46_18030 PF07687 Peptidase dimerisation domain LFT46_18030 PF01546 Peptidase family M20/M25/M40 LFT46_18035 PF00083 Sugar (and other) transporter LFT46_18040 PF00753 Metallo-beta-lactamase superfamily LFT46_18045 PF00356 Bacterial regulatory proteins, lacI family LFT46_18055 PF01261 Xylose isomerase-like TIM barrel LFT46_18060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT46_18060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT46_18065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT46_18065 PF00205 Thiamine pyrophosphate enzyme, central domain LFT46_18065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT46_18070 PF02595 Glycerate kinase family LFT46_18075 PF01979 Amidohydrolase family LFT46_18080 PF00486 Transcriptional regulatory protein, C terminal LFT46_18080 PF00072 Response regulator receiver domain LFT46_18085 PF00578 AhpC/TSA family LFT46_18115 PF07238 PilZ domain LFT46_18115 PF00535 Glycosyl transferase family 2 LFT46_18115 PF03552 Cellulose synthase LFT46_18120 PF01740 STAS domain LFT46_18135 PF00576 HIUase/Transthyretin family LFT46_18140 PF09339 IclR helix-turn-helix domain LFT46_18140 PF01614 Bacterial transcriptional regulator LFT46_18145 PF02028 BCCT, betaine/carnitine/choline family transporter LFT46_18155 PF07729 FCD domain LFT46_18155 PF00392 Bacterial regulatory proteins, gntR family LFT46_18160 PF00551 Formyl transferase LFT46_18165 PF01571 Aminomethyltransferase folate-binding domain LFT46_18165 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT46_18165 PF01266 FAD dependent oxidoreductase LFT46_18165 PF16350 FAD dependent oxidoreductase central domain LFT46_18175 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LFT46_18175 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LFT46_18185 PF00083 Sugar (and other) transporter LFT46_18190 PF01266 FAD dependent oxidoreductase LFT46_18190 PF16350 FAD dependent oxidoreductase central domain LFT46_18190 PF01571 Aminomethyltransferase folate-binding domain LFT46_18190 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT46_18195 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_18195 PF00107 Zinc-binding dehydrogenase LFT46_18200 PF00175 Oxidoreductase NAD-binding domain LFT46_18200 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT46_18200 PF00970 Oxidoreductase FAD-binding domain LFT46_18205 PF00355 Rieske [2Fe-2S] domain LFT46_18205 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LFT46_18210 PF00753 Metallo-beta-lactamase superfamily LFT46_18215 PF00107 Zinc-binding dehydrogenase LFT46_18215 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_18225 PF00156 Phosphoribosyl transferase domain LFT46_18230 PF00586 AIR synthase related protein, N-terminal domain LFT46_18230 PF02769 AIR synthase related protein, C-terminal domain LFT46_18250 PF07724 AAA domain (Cdc48 subfamily) LFT46_18250 PF02861 Clp amino terminal domain, pathogenicity island component LFT46_18250 PF10431 C-terminal, D2-small domain, of ClpB protein LFT46_18250 PF00004 ATPase family associated with various cellular activities (AAA) LFT46_18250 PF17871 AAA lid domain LFT46_18255 PF00005 ABC transporter LFT46_18255 PF03459 TOBE domain LFT46_18295 PF02796 Helix-turn-helix domain of resolvase LFT46_18295 PF00239 Resolvase, N terminal domain LFT46_18300 PF02481 DNA recombination-mediator protein A LFT46_18300 PF17782 DprA winged helix domain LFT46_18325 PF01548 Transposase LFT46_18325 PF02371 Transposase IS116/IS110/IS902 family LFT46_18330 PF17762 HTH domain found in ParB protein LFT46_18330 PF02195 ParB-like nuclease domain LFT46_18400 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_18410 PF03459 TOBE domain LFT46_18435 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LFT46_18440 PF05962 HutD LFT46_18445 PF00893 Small Multidrug Resistance protein LFT46_18450 PF00893 Small Multidrug Resistance protein LFT46_18455 PF00485 Phosphoribulokinase / Uridine kinase family LFT46_18460 PF00248 Aldo/keto reductase family LFT46_18470 PF00753 Metallo-beta-lactamase superfamily LFT46_18470 PF16123 Hydroxyacylglutathione hydrolase C-terminus LFT46_18475 PF03773 Predicted permease LFT46_18480 PF00270 DEAD/DEAH box helicase LFT46_18480 PF00271 Helicase conserved C-terminal domain LFT46_18485 PF03848 Tellurite resistance protein TehB LFT46_18490 PF07690 Major Facilitator Superfamily LFT46_18495 PF07690 Major Facilitator Superfamily LFT46_18505 PF02390 Putative methyltransferase LFT46_18535 PF04542 Sigma-70 region 2 LFT46_18535 PF04545 Sigma-70, region 4 LFT46_18565 PF00271 Helicase conserved C-terminal domain LFT46_18565 PF12419 SNF2 Helicase protein LFT46_18565 PF00176 SNF2 family N-terminal domain LFT46_18575 PF00909 Ammonium Transporter Family LFT46_18580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_18580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_18620 PF02293 AmiS/UreI family transporter LFT46_18635 PF00551 Formyl transferase LFT46_18640 PF03313 Serine dehydratase alpha chain LFT46_18640 PF03315 Serine dehydratase beta chain LFT46_18645 PF04268 Sarcosine oxidase, gamma subunit family LFT46_18650 PF01571 Aminomethyltransferase folate-binding domain LFT46_18650 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT46_18650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_18650 PF17806 Sarcosine oxidase A3 domain LFT46_18655 PF04267 Sarcosine oxidase, delta subunit family LFT46_18660 PF01266 FAD dependent oxidoreductase LFT46_18665 PF00464 Serine hydroxymethyltransferase LFT46_18670 PF00392 Bacterial regulatory proteins, gntR family LFT46_18670 PF07729 FCD domain LFT46_18675 PF00180 Isocitrate/isopropylmalate dehydrogenase LFT46_18680 PF00128 Alpha amylase, catalytic domain LFT46_18685 PF01842 ACT domain LFT46_18685 PF01817 Chorismate mutase type II LFT46_18685 PF00800 Prephenate dehydratase LFT46_18690 PF01494 FAD binding domain LFT46_18690 PF07976 Phenol hydroxylase, C-terminal dimerisation domain LFT46_18695 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT46_18705 PF00171 Aldehyde dehydrogenase family LFT46_18710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT46_18715 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT46_18720 PF03328 HpcH/HpaI aldolase/citrate lyase family LFT46_18730 PF13411 MerR HTH family regulatory protein LFT46_18735 PF00226 DnaJ domain LFT46_18735 PF01556 DnaJ C terminal domain LFT46_18735 PF00684 DnaJ central domain LFT46_18740 PF01025 GrpE LFT46_18745 PF00012 Hsp70 protein LFT46_18755 PF03176 MMPL family LFT46_18765 PF08241 Methyltransferase domain LFT46_18770 PF01810 LysE type translocator LFT46_18775 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFT46_18785 PF04715 Anthranilate synthase component I, N terminal region LFT46_18785 PF00425 chorismate binding enzyme LFT46_18785 PF00117 Glutamine amidotransferase class-I LFT46_18790 PF07690 Major Facilitator Superfamily LFT46_18795 PF13396 Phospholipase_D-nuclease N-terminal LFT46_18795 PF13091 PLD-like domain LFT46_18810 PF00440 Bacterial regulatory proteins, tetR family LFT46_18810 PF02909 Tetracyclin repressor-like, C-terminal domain LFT46_18830 PF00581 Rhodanese-like domain LFT46_18835 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT46_18840 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFT46_18845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFT46_18855 PF00005 ABC transporter LFT46_18860 PF09819 ABC-type cobalt transport system, permease component LFT46_18885 PF03334 Na+/H+ antiporter subunit LFT46_18890 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LFT46_18900 PF00361 Proton-conducting membrane transporter LFT46_18905 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LFT46_18910 PF13244 Domain of unknown function (DUF4040) LFT46_18910 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LFT46_18910 PF00361 Proton-conducting membrane transporter LFT46_18910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFT46_18925 PF00999 Sodium/hydrogen exchanger family LFT46_18930 PF00692 dUTPase LFT46_18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_18960 PF03466 LysR substrate binding domain LFT46_18970 PF00171 Aldehyde dehydrogenase family LFT46_18975 PF13520 Amino acid permease LFT46_18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_18980 PF03466 LysR substrate binding domain LFT46_18985 PF02261 Aspartate decarboxylase LFT46_18995 PF01266 FAD dependent oxidoreductase LFT46_19000 PF07690 Major Facilitator Superfamily LFT46_19005 PF00296 Luciferase-like monooxygenase LFT46_19010 PF00248 Aldo/keto reductase family LFT46_19025 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_19030 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_19040 PF00356 Bacterial regulatory proteins, lacI family LFT46_19045 PF16353 Domain of unknown function(DUF4981) LFT46_19045 PF00703 Glycosyl hydrolases family 2 LFT46_19045 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LFT46_19045 PF02837 Glycosyl hydrolases family 2, sugar binding domain LFT46_19045 PF02929 Beta galactosidase small chain LFT46_19050 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT46_19060 PF07690 Major Facilitator Superfamily LFT46_19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_19065 PF03466 LysR substrate binding domain LFT46_19070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT46_19070 PF13378 Enolase C-terminal domain-like LFT46_19075 PF02426 Muconolactone delta-isomerase LFT46_19085 PF00106 short chain dehydrogenase LFT46_19090 PF00175 Oxidoreductase NAD-binding domain LFT46_19090 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT46_19090 PF00970 Oxidoreductase FAD-binding domain LFT46_19095 PF00866 Ring hydroxylating beta subunit LFT46_19100 PF00355 Rieske [2Fe-2S] domain LFT46_19100 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LFT46_19105 PF00775 Dioxygenase LFT46_19105 PF04444 Catechol dioxygenase N terminus LFT46_19120 PF00171 Aldehyde dehydrogenase family LFT46_19125 PF05199 GMC oxidoreductase LFT46_19125 PF00732 GMC oxidoreductase LFT46_19135 PF13936 Helix-turn-helix domain LFT46_19135 PF00665 Integrase core domain LFT46_19145 PF00005 ABC transporter LFT46_19150 PF12848 ABC transporter LFT46_19150 PF00005 ABC transporter LFT46_19150 PF16326 ABC transporter C-terminal domain LFT46_19155 PF02607 B12 binding domain LFT46_19155 PF02965 Vitamin B12 dependent methionine synthase, activation domain LFT46_19155 PF02310 B12 binding domain LFT46_19155 PF00809 Pterin binding enzyme LFT46_19155 PF02574 Homocysteine S-methyltransferase LFT46_19160 PF00589 Phage integrase family LFT46_19160 PF02899 Phage integrase, N-terminal SAM-like domain LFT46_19190 PF00239 Resolvase, N terminal domain LFT46_19190 PF02796 Helix-turn-helix domain of resolvase LFT46_19205 PF02899 Phage integrase, N-terminal SAM-like domain LFT46_19205 PF00589 Phage integrase family LFT46_19230 PF09339 IclR helix-turn-helix domain LFT46_19230 PF01614 Bacterial transcriptional regulator LFT46_19240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_19240 PF14759 Reductase C-terminal LFT46_19255 PF00866 Ring hydroxylating beta subunit LFT46_19260 PF00355 Rieske [2Fe-2S] domain LFT46_19260 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LFT46_19265 PF00248 Aldo/keto reductase family LFT46_19275 PF00857 Isochorismatase family LFT46_19285 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_19290 PF00005 ABC transporter LFT46_19300 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT46_19315 PF00355 Rieske [2Fe-2S] domain LFT46_19320 PF09339 IclR helix-turn-helix domain LFT46_19320 PF01614 Bacterial transcriptional regulator LFT46_19340 PF05378 Hydantoinase/oxoprolinase N-terminal region LFT46_19340 PF01968 Hydantoinase/oxoprolinase LFT46_19355 PF00005 ABC transporter LFT46_19360 PF02653 Branched-chain amino acid transport system / permease component LFT46_19385 PF01979 Amidohydrolase family LFT46_19390 PF01161 Phosphatidylethanolamine-binding protein LFT46_19400 PF12146 Serine aminopeptidase, S33 LFT46_19405 PF00356 Bacterial regulatory proteins, lacI family LFT46_19415 PF05853 beta-keto acid cleavage enzyme LFT46_19420 PF01161 Phosphatidylethanolamine-binding protein LFT46_19425 PF00665 Integrase core domain LFT46_19445 PF00356 Bacterial regulatory proteins, lacI family LFT46_19455 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_19460 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_19465 PF08244 Glycosyl hydrolases family 32 C terminal LFT46_19465 PF00251 Glycosyl hydrolases family 32 N-terminal domain LFT46_19475 PF00392 Bacterial regulatory proteins, gntR family LFT46_19475 PF07729 FCD domain LFT46_19480 PF03466 LysR substrate binding domain LFT46_19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT46_19485 PF04303 PrpF protein LFT46_19490 PF00375 Sodium:dicarboxylate symporter family LFT46_19505 PF00296 Luciferase-like monooxygenase LFT46_19510 PF00296 Luciferase-like monooxygenase LFT46_19525 PF00005 ABC transporter LFT46_19530 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_19545 PF05872 Bacterial protein of unknown function (DUF853) LFT46_19560 PF00578 AhpC/TSA family LFT46_19560 PF02683 Cytochrome C biogenesis protein transmembrane region LFT46_19560 PF17991 Thioredoxin like C-terminal domain LFT46_19565 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LFT46_19565 PF05425 Copper resistance protein D LFT46_19570 PF00216 Bacterial DNA-binding protein LFT46_19590 PF02929 Beta galactosidase small chain LFT46_19590 PF16353 Domain of unknown function(DUF4981) LFT46_19590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LFT46_19590 PF02837 Glycosyl hydrolases family 2, sugar binding domain LFT46_19595 PF00356 Bacterial regulatory proteins, lacI family LFT46_19615 PF00253 Ribosomal protein S14p/S29e LFT46_19620 PF00471 Ribosomal protein L33 LFT46_19625 PF00830 Ribosomal L28 family LFT46_19630 PF00175 Oxidoreductase NAD-binding domain LFT46_19630 PF00970 Oxidoreductase FAD-binding domain LFT46_19630 PF00042 Globin LFT46_19665 PF08021 Siderophore-interacting FAD-binding domain LFT46_19665 PF04954 Siderophore-interacting protein LFT46_19670 PF00005 ABC transporter LFT46_19675 PF01032 FecCD transport family LFT46_19680 PF01032 FecCD transport family LFT46_19720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT46_19720 PF02770 Acyl-CoA dehydrogenase, middle domain LFT46_19720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT46_19740 PF00248 Aldo/keto reductase family LFT46_19745 PF05368 NmrA-like family LFT46_19780 PF09335 SNARE associated Golgi protein LFT46_19785 PF00392 Bacterial regulatory proteins, gntR family LFT46_19785 PF07729 FCD domain LFT46_19795 PF10415 Fumarase C C-terminus LFT46_19795 PF00206 Lyase LFT46_19800 PF00324 Amino acid permease LFT46_19810 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LFT46_19810 PF00056 lactate/malate dehydrogenase, NAD binding domain LFT46_19815 PF00004 ATPase family associated with various cellular activities (AAA) LFT46_19815 PF06480 FtsH Extracellular LFT46_19815 PF01434 Peptidase family M41 LFT46_19815 PF17862 AAA+ lid domain LFT46_19820 PF04607 Region found in RelA / SpoT proteins LFT46_19820 PF02824 TGS domain LFT46_19820 PF13291 ACT domain LFT46_19825 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFT46_19835 PF01037 Lrp/AsnC ligand binding domain LFT46_19840 PF01810 LysE type translocator LFT46_19865 PF03949 Malic enzyme, NAD binding domain LFT46_19865 PF00390 Malic enzyme, N-terminal domain LFT46_19870 PF17925 Tetracyclin repressor-like, C-terminal domain LFT46_19870 PF00440 Bacterial regulatory proteins, tetR family LFT46_19880 PF03737 Aldolase/RraA LFT46_19885 PF07690 Major Facilitator Superfamily LFT46_19890 PF00083 Sugar (and other) transporter LFT46_19895 PF07690 Major Facilitator Superfamily LFT46_19910 PF00665 Integrase core domain LFT46_19910 PF13936 Helix-turn-helix domain LFT46_19915 PF08125 Mannitol dehydrogenase C-terminal domain LFT46_19915 PF01232 Mannitol dehydrogenase Rossmann domain LFT46_19920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFT46_19920 PF02378 Phosphotransferase system, EIIC LFT46_19920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFT46_19930 PF05524 PEP-utilising enzyme, N-terminal LFT46_19930 PF00391 PEP-utilising enzyme, mobile domain LFT46_19930 PF02896 PEP-utilising enzyme, TIM barrel domain LFT46_19940 PF00561 alpha/beta hydrolase fold LFT46_19940 PF08386 TAP-like protein LFT46_19950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LFT46_19950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LFT46_19955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_19955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_19965 PF00005 ABC transporter LFT46_19965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT46_19970 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_19970 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT46_19975 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_19985 PF03358 NADPH-dependent FMN reductase LFT46_19995 PF00155 Aminotransferase class I and II LFT46_20000 PF00582 Universal stress protein family LFT46_20015 PF02817 e3 binding domain LFT46_20015 PF00364 Biotin-requiring enzyme LFT46_20015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT46_20020 PF02780 Transketolase, C-terminal domain LFT46_20020 PF02779 Transketolase, pyrimidine binding domain LFT46_20025 PF00676 Dehydrogenase E1 component LFT46_20030 PF00155 Aminotransferase class I and II LFT46_20055 PF00206 Lyase LFT46_20055 PF08328 Adenylosuccinate lyase C-terminal LFT46_20060 PF00300 Histidine phosphatase superfamily (branch 1) LFT46_20060 PF00934 PE family LFT46_20065 PF03793 PASTA domain LFT46_20065 PF00069 Protein kinase domain LFT46_20085 PF00005 ABC transporter LFT46_20085 PF03459 TOBE domain LFT46_20090 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_20095 PF01494 FAD binding domain LFT46_20105 PF01494 FAD binding domain LFT46_20110 PF01614 Bacterial transcriptional regulator LFT46_20110 PF09339 IclR helix-turn-helix domain LFT46_20115 PF07690 Major Facilitator Superfamily LFT46_20135 PF07690 Major Facilitator Superfamily LFT46_20140 PF00392 Bacterial regulatory proteins, gntR family LFT46_20140 PF07729 FCD domain LFT46_20145 PF01177 Asp/Glu/Hydantoin racemase LFT46_20150 PF00449 Urease alpha-subunit, N-terminal domain LFT46_20150 PF01979 Amidohydrolase family LFT46_20160 PF00781 Diacylglycerol kinase catalytic domain LFT46_20165 PF02233 NAD(P) transhydrogenase beta subunit LFT46_20170 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LFT46_20175 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LFT46_20175 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LFT46_20185 PF03737 Aldolase/RraA LFT46_20190 PF01614 Bacterial transcriptional regulator LFT46_20190 PF09339 IclR helix-turn-helix domain LFT46_20195 PF08501 Shikimate dehydrogenase substrate binding domain LFT46_20200 PF07690 Major Facilitator Superfamily LFT46_20200 PF00083 Sugar (and other) transporter LFT46_20210 PF09339 IclR helix-turn-helix domain LFT46_20210 PF01614 Bacterial transcriptional regulator LFT46_20215 PF01144 Coenzyme A transferase LFT46_20220 PF01144 Coenzyme A transferase LFT46_20225 PF02803 Thiolase, C-terminal domain LFT46_20225 PF00108 Thiolase, N-terminal domain LFT46_20230 PF02627 Carboxymuconolactone decarboxylase family LFT46_20235 PF00561 alpha/beta hydrolase fold LFT46_20240 PF10397 Adenylosuccinate lyase C-terminus LFT46_20240 PF00206 Lyase LFT46_20245 PF00775 Dioxygenase LFT46_20250 PF00775 Dioxygenase LFT46_20250 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LFT46_20255 PF01261 Xylose isomerase-like TIM barrel LFT46_20255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT46_20260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LFT46_20260 PF08501 Shikimate dehydrogenase substrate binding domain LFT46_20265 PF01614 Bacterial transcriptional regulator LFT46_20265 PF09339 IclR helix-turn-helix domain LFT46_20270 PF07690 Major Facilitator Superfamily LFT46_20270 PF00083 Sugar (and other) transporter LFT46_20275 PF01068 ATP dependent DNA ligase domain LFT46_20275 PF04679 ATP dependent DNA ligase C terminal region LFT46_20290 PF16657 Maltogenic Amylase, C-terminal domain LFT46_20290 PF00128 Alpha amylase, catalytic domain LFT46_20295 PF00155 Aminotransferase class I and II LFT46_20310 PF01571 Aminomethyltransferase folate-binding domain LFT46_20315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT46_20320 PF00171 Aldehyde dehydrogenase family LFT46_20325 PF02219 Methylenetetrahydrofolate reductase LFT46_20330 PF01842 ACT domain LFT46_20330 PF00551 Formyl transferase LFT46_20335 PF01571 Aminomethyltransferase folate-binding domain LFT46_20350 PF11862 Domain of unknown function (DUF3382) LFT46_20350 PF02653 Branched-chain amino acid transport system / permease component LFT46_20360 PF00005 ABC transporter LFT46_20365 PF00005 ABC transporter LFT46_20365 PF12399 Branched-chain amino acid ATP-binding cassette transporter LFT46_20370 PF02597 ThiS family LFT46_20400 PF02583 Metal-sensitive transcriptional repressor LFT46_20410 PF00403 Heavy-metal-associated domain LFT46_20425 PF00892 EamA-like transporter family LFT46_20450 PF07681 DoxX LFT46_20460 PF00772 DnaB-like helicase N terminal domain LFT46_20460 PF03796 DnaB-like helicase C terminal domain LFT46_20470 PF03358 NADPH-dependent FMN reductase LFT46_20475 PF02567 Phenazine biosynthesis-like protein LFT46_20480 PF03948 Ribosomal protein L9, C-terminal domain LFT46_20480 PF01281 Ribosomal protein L9, N-terminal domain LFT46_20485 PF01084 Ribosomal protein S18 LFT46_20490 PF00436 Single-strand binding protein family LFT46_20495 PF01250 Ribosomal protein S6 LFT46_20505 PF13614 AAA domain LFT46_20530 PF14667 Polysaccharide biosynthesis C-terminal domain LFT46_20550 PF02397 Bacterial sugar transferase LFT46_20555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT46_20555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT46_20560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFT46_20570 PF02127 Aminopeptidase I zinc metalloprotease (M18) LFT46_20575 PF00324 Amino acid permease LFT46_20585 PF00005 ABC transporter LFT46_20595 PF07690 Major Facilitator Superfamily LFT46_20605 PF12848 ABC transporter LFT46_20605 PF16326 ABC transporter C-terminal domain LFT46_20605 PF00005 ABC transporter LFT46_20610 PF00905 Penicillin binding protein transpeptidase domain LFT46_20625 PF00300 Histidine phosphatase superfamily (branch 1) LFT46_20630 PF01743 Poly A polymerase head domain LFT46_20630 PF12627 Probable RNA and SrmB- binding site of polymerase A LFT46_20630 PF13735 tRNA nucleotidyltransferase domain 2 putative LFT46_20635 PF00293 NUDIX domain LFT46_20640 PF03023 Lipid II flippase MurJ LFT46_20650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_20655 PF00085 Thioredoxin LFT46_20660 PF17762 HTH domain found in ParB protein LFT46_20660 PF02195 ParB-like nuclease domain LFT46_20665 PF13614 AAA domain LFT46_20670 PF02527 rRNA small subunit methyltransferase G LFT46_20680 PF02096 60Kd inner membrane protein LFT46_20685 PF01809 Putative membrane protein insertion efficiency factor LFT46_20690 PF00825 Ribonuclease P LFT46_20695 PF00468 Ribosomal protein L34 LFT46_20705 PF00676 Dehydrogenase E1 component LFT46_20710 PF02817 e3 binding domain LFT46_20710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT46_20710 PF00364 Biotin-requiring enzyme LFT46_20715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT46_20715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT46_20720 PF04198 Putative sugar-binding domain LFT46_20725 PF13407 Periplasmic binding protein domain LFT46_20730 PF00005 ABC transporter LFT46_20735 PF02653 Branched-chain amino acid transport system / permease component LFT46_20740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT46_20740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT46_20765 PF00665 Integrase core domain LFT46_20765 PF13936 Helix-turn-helix domain LFT46_20775 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_20775 PF00107 Zinc-binding dehydrogenase LFT46_20785 PF00005 ABC transporter LFT46_20790 PF02653 Branched-chain amino acid transport system / permease component LFT46_20795 PF13407 Periplasmic binding protein domain LFT46_20800 PF02733 Dak1 domain LFT46_20800 PF02734 DAK2 domain LFT46_20805 PF02502 Ribose/Galactose Isomerase LFT46_20810 PF00121 Triosephosphate isomerase LFT46_20815 PF08220 DeoR-like helix-turn-helix domain LFT46_20815 PF00455 DeoR C terminal sensor domain LFT46_20820 PF00107 Zinc-binding dehydrogenase LFT46_20820 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_20835 PF00589 Phage integrase family LFT46_20835 PF02899 Phage integrase, N-terminal SAM-like domain LFT46_20895 PF17762 HTH domain found in ParB protein LFT46_20895 PF02195 ParB-like nuclease domain LFT46_20900 PF01548 Transposase LFT46_20900 PF02371 Transposase IS116/IS110/IS902 family LFT46_20990 PF10609 NUBPL iron-transfer P-loop NTPase LFT46_20990 PF01883 Iron-sulfur cluster assembly protein LFT46_21060 PF00069 Protein kinase domain LFT46_21060 PF03793 PASTA domain LFT46_21075 PF01232 Mannitol dehydrogenase Rossmann domain LFT46_21075 PF08125 Mannitol dehydrogenase C-terminal domain LFT46_21085 PF08240 Alcohol dehydrogenase GroES-like domain LFT46_21085 PF00107 Zinc-binding dehydrogenase LFT46_21090 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_21095 PF00528 Binding-protein-dependent transport system inner membrane component LFT46_21110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT46_21110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT46_21125 PF12697 Alpha/beta hydrolase family LFT46_21130 PF01964 Radical SAM ThiC family LFT46_21130 PF13667 ThiC-associated domain LFT46_21135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT46_21135 PF00364 Biotin-requiring enzyme LFT46_21135 PF02817 e3 binding domain LFT46_21140 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT46_21140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFT46_21145 PF01266 FAD dependent oxidoreductase LFT46_21145 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LFT46_21150 PF01116 Fructose-bisphosphate aldolase class-II