locus-tag class description LFT47_00005 PF00308 Bacterial dnaA protein LFT47_00005 PF08299 Bacterial dnaA protein helix-turn-helix LFT47_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LFT47_00010 PF02767 DNA polymerase III beta subunit, central domain LFT47_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LFT47_00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LFT47_00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT47_00020 PF02463 RecF/RecN/SMC N terminal domain LFT47_00025 PF05258 Dna[CI] antecedent, DciA LFT47_00030 PF01751 Toprim domain LFT47_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_00030 PF00204 DNA gyrase B LFT47_00030 PF00986 DNA gyrase B subunit, carboxyl terminus LFT47_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller LFT47_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A LFT47_00040 PF12089 Transmembrane domain of unknown function (DUF3566) LFT47_00065 PF00535 Glycosyl transferase family 2 LFT47_00075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFT47_00095 PF01098 Cell cycle protein LFT47_00100 PF16916 Dimerisation domain of Zinc Transporter LFT47_00100 PF01545 Cation efflux family LFT47_00105 PF01022 Bacterial regulatory protein, arsR family LFT47_00110 PF03352 Methyladenine glycosylase LFT47_00115 PF13532 2OG-Fe(II) oxygenase superfamily LFT47_00120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFT47_00120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFT47_00125 PF06781 Cell division protein CrgA LFT47_00130 PF04203 Sortase domain LFT47_00135 PF00117 Glutamine amidotransferase class-I LFT47_00140 PF03793 PASTA domain LFT47_00140 PF00069 Protein kinase domain LFT47_00145 PF00069 Protein kinase domain LFT47_00150 PF00905 Penicillin binding protein transpeptidase domain LFT47_00155 PF01098 Cell cycle protein LFT47_00165 PF16697 Inner membrane component of T3SS, cytoplasmic domain LFT47_00185 PF01593 Flavin containing amine oxidoreductase LFT47_00190 PF03746 LamB/YcsF family LFT47_00195 PF02626 Carboxyltransferase domain, subdomain A and B LFT47_00200 PF00289 Biotin carboxylase, N-terminal domain LFT47_00200 PF02785 Biotin carboxylase C-terminal domain LFT47_00200 PF00364 Biotin-requiring enzyme LFT47_00200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT47_00205 PF07729 FCD domain LFT47_00205 PF00392 Bacterial regulatory proteins, gntR family LFT47_00220 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_00225 PF03459 TOBE domain LFT47_00225 PF00005 ABC transporter LFT47_00235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFT47_00235 PF00356 Bacterial regulatory proteins, lacI family LFT47_00240 PF00916 Sulfate permease family LFT47_00240 PF01740 STAS domain LFT47_00260 PF00294 pfkB family carbohydrate kinase LFT47_00265 PF01161 Phosphatidylethanolamine-binding protein LFT47_00275 PF00196 Bacterial regulatory proteins, luxR family LFT47_00280 PF01380 SIS domain LFT47_00285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFT47_00300 PF08281 Sigma-70, region 4 LFT47_00300 PF04542 Sigma-70 region 2 LFT47_00310 PF02595 Glycerate kinase family LFT47_00320 PF00860 Permease family LFT47_00325 PF00881 Nitroreductase family LFT47_00335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFT47_00335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFT47_00335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFT47_00335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFT47_00345 PF00854 POT family LFT47_00350 PF01425 Amidase LFT47_00355 PF03575 Peptidase family S51 LFT47_00360 PF00581 Rhodanese-like domain LFT47_00360 PF01206 Sulfurtransferase TusA LFT47_00365 PF00800 Prephenate dehydratase LFT47_00365 PF01842 ACT domain LFT47_00375 PF00781 Diacylglycerol kinase catalytic domain LFT47_00380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT47_00380 PF02403 Seryl-tRNA synthetase N-terminal domain LFT47_00405 PF00719 Inorganic pyrophosphatase LFT47_00410 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LFT47_00420 PF01171 PP-loop family LFT47_00420 PF09179 TilS substrate binding domain LFT47_00425 PF00156 Phosphoribosyl transferase domain LFT47_00455 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_00455 PF17862 AAA+ lid domain LFT47_00455 PF01434 Peptidase family M41 LFT47_00460 PF01227 GTP cyclohydrolase I LFT47_00465 PF00809 Pterin binding enzyme LFT47_00470 PF02152 Dihydroneopterin aldolase LFT47_00475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LFT47_00500 PF02569 Pantoate-beta-alanine ligase LFT47_00505 PF07690 Major Facilitator Superfamily LFT47_00525 PF07729 FCD domain LFT47_00525 PF00392 Bacterial regulatory proteins, gntR family LFT47_00530 PF02515 CoA-transferase family III LFT47_00535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_00535 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_00535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_00565 PF12697 Alpha/beta hydrolase family LFT47_00570 PF01336 OB-fold nucleic acid binding domain LFT47_00570 PF00152 tRNA synthetases class II (D, K and N) LFT47_00580 PF11774 Lsr2 LFT47_00585 PF07724 AAA domain (Cdc48 subfamily) LFT47_00585 PF17871 AAA lid domain LFT47_00585 PF02861 Clp amino terminal domain, pathogenicity island component LFT47_00585 PF10431 C-terminal, D2-small domain, of ClpB protein LFT47_00585 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_00590 PF07676 WD40-like Beta Propeller Repeat LFT47_00590 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LFT47_00590 PF00326 Prolyl oligopeptidase family LFT47_00595 PF00583 Acetyltransferase (GNAT) family LFT47_00600 PF02733 Dak1 domain LFT47_00605 PF02734 DAK2 domain LFT47_00610 PF03610 PTS system fructose IIA component LFT47_00610 PF05524 PEP-utilising enzyme, N-terminal LFT47_00610 PF00391 PEP-utilising enzyme, mobile domain LFT47_00610 PF00381 PTS HPr component phosphorylation site LFT47_00620 PF01209 ubiE/COQ5 methyltransferase family LFT47_00625 PF00633 Helix-hairpin-helix motif LFT47_00625 PF00730 HhH-GPD superfamily base excision DNA repair protein LFT47_00635 PF02457 DisA bacterial checkpoint controller nucleotide-binding LFT47_00635 PF10635 DisA bacterial checkpoint controller linker region LFT47_00635 PF00633 Helix-hairpin-helix motif LFT47_00640 PF00009 Elongation factor Tu GTP binding domain LFT47_00640 PF16658 Class II release factor RF3, C-terminal domain LFT47_00650 PF18073 Rubredoxin metal binding domain LFT47_00665 PF12849 PBP superfamily domain LFT47_00670 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_00675 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_00680 PF00005 ABC transporter LFT47_00685 PF01384 Phosphate transporter family LFT47_00705 PF02515 CoA-transferase family III LFT47_00710 PF09335 SNARE associated Golgi protein LFT47_00715 PF00547 Urease, gamma subunit LFT47_00720 PF00699 Urease beta subunit LFT47_00725 PF01979 Amidohydrolase family LFT47_00725 PF00449 Urease alpha-subunit, N-terminal domain LFT47_00730 PF02814 UreE urease accessory protein, N-terminal domain LFT47_00730 PF05194 UreE urease accessory protein, C-terminal domain LFT47_00735 PF01730 UreF LFT47_00740 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFT47_00745 PF01774 UreD urease accessory protein LFT47_00750 PF03824 High-affinity nickel-transport protein LFT47_00755 PF14791 DNA polymerase beta thumb LFT47_00755 PF14716 Helix-hairpin-helix domain LFT47_00755 PF02811 PHP domain LFT47_00760 PF02446 4-alpha-glucanotransferase LFT47_00770 PF00248 Aldo/keto reductase family LFT47_00780 PF00248 Aldo/keto reductase family LFT47_00785 PF00248 Aldo/keto reductase family LFT47_00805 PF07311 Dodecin LFT47_00810 PF00083 Sugar (and other) transporter LFT47_00815 PF01042 Endoribonuclease L-PSP LFT47_00835 PF00171 Aldehyde dehydrogenase family LFT47_00840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_00840 PF03466 LysR substrate binding domain LFT47_00845 PF00392 Bacterial regulatory proteins, gntR family LFT47_00845 PF07729 FCD domain LFT47_00850 PF00561 alpha/beta hydrolase fold LFT47_00860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT47_00860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT47_00865 PF02447 GntP family permease LFT47_00870 PF01116 Fructose-bisphosphate aldolase class-II LFT47_00880 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFT47_00880 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFT47_00880 PF01276 Orn/Lys/Arg decarboxylase, major domain LFT47_00915 PF16555 Gram-positive pilin subunit D1, N-terminal domain LFT47_00915 PF00746 LPXTG cell wall anchor motif LFT47_00925 PF00746 LPXTG cell wall anchor motif LFT47_00925 PF16555 Gram-positive pilin subunit D1, N-terminal domain LFT47_00945 PF00106 short chain dehydrogenase LFT47_00970 PF02653 Branched-chain amino acid transport system / permease component LFT47_00975 PF00005 ABC transporter LFT47_00980 PF00171 Aldehyde dehydrogenase family LFT47_00985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT47_00985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_00985 PF00205 Thiamine pyrophosphate enzyme, central domain LFT47_00990 PF03328 HpcH/HpaI aldolase/citrate lyase family LFT47_00995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_00995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_01000 PF00356 Bacterial regulatory proteins, lacI family LFT47_01005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT47_01005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT47_01005 PF01842 ACT domain LFT47_01010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_01010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_01020 PF01261 Xylose isomerase-like TIM barrel LFT47_01025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_01025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_01030 PF00171 Aldehyde dehydrogenase family LFT47_01040 PF00583 Acetyltransferase (GNAT) family LFT47_01050 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_01050 PF07724 AAA domain (Cdc48 subfamily) LFT47_01050 PF17871 AAA lid domain LFT47_01050 PF02861 Clp amino terminal domain, pathogenicity island component LFT47_01050 PF10431 C-terminal, D2-small domain, of ClpB protein LFT47_01060 PF00989 PAS fold LFT47_01060 PF16736 Single Cache-like LFT47_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_01060 PF00512 His Kinase A (phospho-acceptor) domain LFT47_01065 PF00486 Transcriptional regulatory protein, C terminal LFT47_01065 PF00072 Response regulator receiver domain LFT47_01075 PF00083 Sugar (and other) transporter LFT47_01080 PF17827 PrmC N-terminal domain LFT47_01080 PF13649 Methyltransferase domain LFT47_01095 PF04679 ATP dependent DNA ligase C terminal region LFT47_01095 PF01068 ATP dependent DNA ligase domain LFT47_01095 PF13298 DNA polymerase Ligase (LigD) LFT47_01100 PF02735 Ku70/Ku80 beta-barrel domain LFT47_01115 PF05532 CsbD-like LFT47_01125 PF00210 Ferritin-like domain LFT47_01140 PF02896 PEP-utilising enzyme, TIM barrel domain LFT47_01140 PF05524 PEP-utilising enzyme, N-terminal LFT47_01140 PF00391 PEP-utilising enzyme, mobile domain LFT47_01145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFT47_01145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFT47_01150 PF00294 pfkB family carbohydrate kinase LFT47_01155 PF08220 DeoR-like helix-turn-helix domain LFT47_01155 PF00455 DeoR C terminal sensor domain LFT47_01175 PF01968 Hydantoinase/oxoprolinase LFT47_01175 PF05378 Hydantoinase/oxoprolinase N-terminal region LFT47_01190 PF00005 ABC transporter LFT47_01195 PF02653 Branched-chain amino acid transport system / permease component LFT47_01220 PF01979 Amidohydrolase family LFT47_01230 PF00356 Bacterial regulatory proteins, lacI family LFT47_01235 PF13419 Haloacid dehalogenase-like hydrolase LFT47_01240 PF03633 Glycosyl hydrolase family 65, C-terminal domain LFT47_01240 PF03632 Glycosyl hydrolase family 65 central catalytic domain LFT47_01240 PF03636 Glycosyl hydrolase family 65, N-terminal domain LFT47_01270 PF03746 LamB/YcsF family LFT47_01275 PF02682 Carboxyltransferase domain, subdomain C and D LFT47_01280 PF02626 Carboxyltransferase domain, subdomain A and B LFT47_01285 PF04286 Protein of unknown function (DUF445) LFT47_01290 PF03009 Glycerophosphoryl diester phosphodiesterase family LFT47_01295 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT47_01320 PF01910 Thiamine-binding protein LFT47_01325 PF01596 O-methyltransferase LFT47_01345 PF00083 Sugar (and other) transporter LFT47_01355 PF00990 Diguanylate cyclase, GGDEF domain LFT47_01355 PF05230 MASE2 domain LFT47_01370 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_01375 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_01380 PF00356 Bacterial regulatory proteins, lacI family LFT47_01385 PF12728 Helix-turn-helix domain LFT47_01405 PF00324 Amino acid permease LFT47_01415 PF01175 Urocanase Rossmann-like domain LFT47_01415 PF17392 Urocanase C-terminal domain LFT47_01415 PF17391 Urocanase N-terminal domain LFT47_01420 PF00221 Aromatic amino acid lyase LFT47_01440 PF00491 Arginase family LFT47_01445 PF00860 Permease family LFT47_01460 PF00582 Universal stress protein family LFT47_01465 PF00391 PEP-utilising enzyme, mobile domain LFT47_01465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT47_01475 PF00356 Bacterial regulatory proteins, lacI family LFT47_01480 PF00294 pfkB family carbohydrate kinase LFT47_01505 PF03780 Asp23 family, cell envelope-related function LFT47_01535 PF00128 Alpha amylase, catalytic domain LFT47_01540 PF01547 Bacterial extracellular solute-binding protein LFT47_01545 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_01550 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_01560 PF00356 Bacterial regulatory proteins, lacI family LFT47_01580 PF00196 Bacterial regulatory proteins, luxR family LFT47_01580 PF00072 Response regulator receiver domain LFT47_01585 PF07730 Histidine kinase LFT47_01595 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFT47_01595 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFT47_01600 PF01144 Coenzyme A transferase LFT47_01605 PF01144 Coenzyme A transferase LFT47_01615 PF02469 Fasciclin domain LFT47_01620 PF00875 DNA photolyase LFT47_01620 PF03441 FAD binding domain of DNA photolyase LFT47_01625 PF00171 Aldehyde dehydrogenase family LFT47_01630 PF00378 Enoyl-CoA hydratase/isomerase LFT47_01635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT47_01635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT47_01640 PF00378 Enoyl-CoA hydratase/isomerase LFT47_01650 PF00501 AMP-binding enzyme LFT47_01650 PF13193 AMP-binding enzyme C-terminal domain LFT47_01655 PF02540 NAD synthase LFT47_01660 PF00356 Bacterial regulatory proteins, lacI family LFT47_01670 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_01675 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_01685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_01685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_01700 PF00156 Phosphoribosyl transferase domain LFT47_01715 PF13344 Haloacid dehalogenase-like hydrolase LFT47_01720 PF02527 rRNA small subunit methyltransferase G LFT47_01720 PF00588 SpoU rRNA Methylase family LFT47_01725 PF01116 Fructose-bisphosphate aldolase class-II LFT47_01740 PF05506 Domain of unknown function (DUF756) LFT47_01740 PF04185 Phosphoesterase family LFT47_01745 PF00709 Adenylosuccinate synthetase LFT47_01760 PF13380 CoA binding domain LFT47_01770 PF04237 YjbR LFT47_01780 PF01547 Bacterial extracellular solute-binding protein LFT47_01785 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_01790 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_01810 PF00586 AIR synthase related protein, N-terminal domain LFT47_01810 PF02769 AIR synthase related protein, C-terminal domain LFT47_01810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LFT47_01835 PF00082 Subtilase family LFT47_01835 PF06280 Fn3-like domain LFT47_01835 PF02225 PA domain LFT47_01835 PF00746 LPXTG cell wall anchor motif LFT47_01855 PF01047 MarR family LFT47_01870 PF00696 Amino acid kinase family LFT47_01870 PF01842 ACT domain LFT47_01870 PF13840 ACT domain LFT47_01875 PF00005 ABC transporter LFT47_01885 PF02132 RecR protein LFT47_01885 PF13662 Toprim domain LFT47_01890 PF12169 DNA polymerase III subunits gamma and tau domain III LFT47_01900 PF01784 NIF3 (NGG1p interacting factor 3) LFT47_01935 PF02586 SOS response associated peptidase (SRAP) LFT47_01965 PF01757 Acyltransferase family LFT47_02020 PF04225 Opacity-associated protein A LysM-like domain LFT47_02020 PF01551 Peptidase family M23 LFT47_02130 PF05866 Endodeoxyribonuclease RusA LFT47_02315 PF00171 Aldehyde dehydrogenase family LFT47_02325 PF07690 Major Facilitator Superfamily LFT47_02330 PF01047 MarR family LFT47_02335 PF01464 Transglycosylase SLT domain LFT47_02335 PF10145 Phage-related minor tail protein LFT47_02335 PF01551 Peptidase family M23 LFT47_02340 PF00255 Glutathione peroxidase LFT47_02345 PF07969 Amidohydrolase family LFT47_02360 PF00356 Bacterial regulatory proteins, lacI family LFT47_02365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_02370 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_02375 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_02375 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_02380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_02380 PF00005 ABC transporter LFT47_02385 PF00005 ABC transporter LFT47_02385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_02395 PF00149 Calcineurin-like phosphoesterase LFT47_02400 PF17101 Stealth protein CR1, conserved region 1 LFT47_02400 PF17102 Stealth protein CR3, conserved region 3 LFT47_02400 PF17103 Stealth protein CR4, conserved region 4 LFT47_02400 PF11380 Stealth protein CR2, conserved region 2 LFT47_02420 PF13977 BetI-type transcriptional repressor, C-terminal LFT47_02420 PF00440 Bacterial regulatory proteins, tetR family LFT47_02435 PF07690 Major Facilitator Superfamily LFT47_02435 PF00083 Sugar (and other) transporter LFT47_02440 PF07676 WD40-like Beta Propeller Repeat LFT47_02450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_02450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_02455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_02455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_02465 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_02470 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_02485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_02485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_02490 PF01047 MarR family LFT47_02490 PF00480 ROK family LFT47_02500 PF01274 Malate synthase LFT47_02505 PF00463 Isocitrate lyase family LFT47_02510 PF01381 Helix-turn-helix LFT47_02530 PF00005 ABC transporter LFT47_02545 PF01702 Queuine tRNA-ribosyltransferase LFT47_02585 PF00106 short chain dehydrogenase LFT47_02590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_02590 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_02590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_02595 PF05336 L-rhamnose mutarotase LFT47_02600 PF00083 Sugar (and other) transporter LFT47_02600 PF07690 Major Facilitator Superfamily LFT47_02605 PF00356 Bacterial regulatory proteins, lacI family LFT47_02610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_02610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_02635 PF00311 Phosphoenolpyruvate carboxylase LFT47_02645 PF09335 SNARE associated Golgi protein LFT47_02650 PF01661 Macro domain LFT47_02660 PF00849 RNA pseudouridylate synthase LFT47_02665 PF04185 Phosphoesterase family LFT47_02690 PF00155 Aminotransferase class I and II LFT47_02690 PF00392 Bacterial regulatory proteins, gntR family LFT47_02700 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT47_02700 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFT47_02705 PF00271 Helicase conserved C-terminal domain LFT47_02705 PF00270 DEAD/DEAH box helicase LFT47_02705 PF08494 DEAD/H associated LFT47_02730 PF00999 Sodium/hydrogen exchanger family LFT47_02730 PF02080 TrkA-C domain LFT47_02730 PF02254 TrkA-N domain LFT47_02800 PF01047 MarR family LFT47_02820 PF06463 Molybdenum Cofactor Synthesis C LFT47_02820 PF04055 Radical SAM superfamily LFT47_02830 PF00083 Sugar (and other) transporter LFT47_02835 PF07729 FCD domain LFT47_02835 PF00392 Bacterial regulatory proteins, gntR family LFT47_02840 PF00795 Carbon-nitrogen hydrolase LFT47_02850 PF08244 Glycosyl hydrolases family 32 C terminal LFT47_02850 PF00251 Glycosyl hydrolases family 32 N-terminal domain LFT47_02865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFT47_02865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFT47_02870 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA LFT47_02905 PF00708 Acylphosphatase LFT47_02915 PF03466 LysR substrate binding domain LFT47_02915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_02925 PF14437 MafB19-like deaminase LFT47_02935 PF00440 Bacterial regulatory proteins, tetR family LFT47_02940 PF07690 Major Facilitator Superfamily LFT47_02950 PF13419 Haloacid dehalogenase-like hydrolase LFT47_02955 PF00356 Bacterial regulatory proteins, lacI family LFT47_02965 PF01979 Amidohydrolase family LFT47_02970 PF13580 SIS domain LFT47_02975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFT47_02990 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LFT47_02995 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LFT47_03010 PF00512 His Kinase A (phospho-acceptor) domain LFT47_03010 PF00672 HAMP domain LFT47_03010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_03015 PF00072 Response regulator receiver domain LFT47_03015 PF00486 Transcriptional regulatory protein, C terminal LFT47_03025 PF00486 Transcriptional regulatory protein, C terminal LFT47_03025 PF00072 Response regulator receiver domain LFT47_03030 PF00300 Histidine phosphatase superfamily (branch 1) LFT47_03035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_03035 PF03466 LysR substrate binding domain LFT47_03040 PF00892 EamA-like transporter family LFT47_03050 PF08361 MAATS-type transcriptional repressor, C-terminal region LFT47_03050 PF00440 Bacterial regulatory proteins, tetR family LFT47_03065 PF00403 Heavy-metal-associated domain LFT47_03065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFT47_03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_03070 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LFT47_03075 PF00480 ROK family LFT47_03080 PF00701 Dihydrodipicolinate synthetase family LFT47_03085 PF00005 ABC transporter LFT47_03085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_03090 PF00005 ABC transporter LFT47_03090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_03095 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_03105 PF07702 UTRA domain LFT47_03105 PF00392 Bacterial regulatory proteins, gntR family LFT47_03115 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LFT47_03115 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LFT47_03120 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT47_03120 PF00391 PEP-utilising enzyme, mobile domain LFT47_03135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFT47_03135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFT47_03135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFT47_03135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFT47_03140 PF00270 DEAD/DEAH box helicase LFT47_03140 PF00271 Helicase conserved C-terminal domain LFT47_03140 PF16124 RecQ zinc-binding LFT47_03145 PF07690 Major Facilitator Superfamily LFT47_03160 PF00326 Prolyl oligopeptidase family LFT47_03160 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LFT47_03180 PF02673 Bacitracin resistance protein BacA LFT47_03185 PF00027 Cyclic nucleotide-binding domain LFT47_03185 PF00520 Ion transport protein LFT47_03195 PF00107 Zinc-binding dehydrogenase LFT47_03195 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_03210 PF10759 Protein of unknown function (DUF2587) LFT47_03220 PF00248 Aldo/keto reductase family LFT47_03225 PF00356 Bacterial regulatory proteins, lacI family LFT47_03235 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03240 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_03250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_03265 PF01361 Tautomerase enzyme LFT47_03275 PF01409 tRNA synthetases class II core domain (F) LFT47_03275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LFT47_03325 PF13419 Haloacid dehalogenase-like hydrolase LFT47_03335 PF00561 alpha/beta hydrolase fold LFT47_03340 PF12169 DNA polymerase III subunits gamma and tau domain III LFT47_03345 PF02223 Thymidylate kinase LFT47_03350 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT47_03365 PF00300 Histidine phosphatase superfamily (branch 1) LFT47_03370 PF01895 PhoU domain LFT47_03375 PF00512 His Kinase A (phospho-acceptor) domain LFT47_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_03380 PF00486 Transcriptional regulatory protein, C terminal LFT47_03380 PF00072 Response regulator receiver domain LFT47_03390 PF02559 CarD-like/TRCF domain LFT47_03395 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LFT47_03400 PF02542 YgbB family LFT47_03405 PF01406 tRNA synthetases class I (C) catalytic domain LFT47_03405 PF09190 DALR domain LFT47_03410 PF00588 SpoU rRNA Methylase family LFT47_03410 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFT47_03415 PF00795 Carbon-nitrogen hydrolase LFT47_03420 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFT47_03420 PF00128 Alpha amylase, catalytic domain LFT47_03430 PF00343 Carbohydrate phosphorylase LFT47_03430 PF11897 Protein of unknown function (DUF3417) LFT47_03435 PF11896 Domain of unknown function (DUF3416) LFT47_03440 PF16657 Maltogenic Amylase, C-terminal domain LFT47_03440 PF00128 Alpha amylase, catalytic domain LFT47_03445 PF02806 Alpha amylase, C-terminal all-beta domain LFT47_03445 PF00128 Alpha amylase, catalytic domain LFT47_03445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFT47_03480 PF01565 FAD binding domain LFT47_03480 PF02913 FAD linked oxidases, C-terminal domain LFT47_03490 PF07969 Amidohydrolase family LFT47_03495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_03495 PF00005 ABC transporter LFT47_03500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_03500 PF00005 ABC transporter LFT47_03505 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03515 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_03515 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03530 PF00005 ABC transporter LFT47_03530 PF17912 MalK OB fold domain LFT47_03535 PF02358 Trehalose-phosphatase LFT47_03535 PF03636 Glycosyl hydrolase family 65, N-terminal domain LFT47_03535 PF03633 Glycosyl hydrolase family 65, C-terminal domain LFT47_03535 PF03632 Glycosyl hydrolase family 65 central catalytic domain LFT47_03540 PF00982 Glycosyltransferase family 20 LFT47_03555 PF17853 GGDEF-like domain LFT47_03555 PF13556 PucR C-terminal helix-turn-helix domain LFT47_03555 PF07905 Purine catabolism regulatory protein-like family LFT47_03565 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT47_03595 PF03928 Haem-degrading LFT47_03600 PF00248 Aldo/keto reductase family LFT47_03610 PF00005 ABC transporter LFT47_03615 PF02653 Branched-chain amino acid transport system / permease component LFT47_03620 PF00732 GMC oxidoreductase LFT47_03620 PF05199 GMC oxidoreductase LFT47_03630 PF01156 Inosine-uridine preferring nucleoside hydrolase LFT47_03635 PF02502 Ribose/Galactose Isomerase LFT47_03645 PF00294 pfkB family carbohydrate kinase LFT47_03650 PF00596 Class II Aldolase and Adducin N-terminal domain LFT47_03655 PF13407 Periplasmic binding protein domain LFT47_03660 PF02653 Branched-chain amino acid transport system / permease component LFT47_03665 PF02653 Branched-chain amino acid transport system / permease component LFT47_03670 PF00005 ABC transporter LFT47_03680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT47_03680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT47_03685 PF08220 DeoR-like helix-turn-helix domain LFT47_03685 PF00455 DeoR C terminal sensor domain LFT47_03695 PF00480 ROK family LFT47_03705 PF02126 Phosphotriesterase family LFT47_03710 PF00480 ROK family LFT47_03715 PF02653 Branched-chain amino acid transport system / permease component LFT47_03720 PF01168 Alanine racemase, N-terminal domain LFT47_03725 PF00005 ABC transporter LFT47_03730 PF01380 SIS domain LFT47_03735 PF13302 Acetyltransferase (GNAT) domain LFT47_03750 PF05506 Domain of unknown function (DUF756) LFT47_03750 PF04185 Phosphoesterase family LFT47_03755 PF01569 PAP2 superfamily LFT47_03770 PF07687 Peptidase dimerisation domain LFT47_03770 PF01546 Peptidase family M20/M25/M40 LFT47_03775 PF00583 Acetyltransferase (GNAT) family LFT47_03785 PF08447 PAS fold LFT47_03785 PF00990 Diguanylate cyclase, GGDEF domain LFT47_03785 PF08448 PAS fold LFT47_03785 PF00563 EAL domain LFT47_03795 PF00480 ROK family LFT47_03800 PF00128 Alpha amylase, catalytic domain LFT47_03810 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03815 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03830 PF01979 Amidohydrolase family LFT47_03840 PF01063 Amino-transferase class IV LFT47_03850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_03850 PF00005 ABC transporter LFT47_03855 PF00005 ABC transporter LFT47_03855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_03860 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_03880 PF00857 Isochorismatase family LFT47_03925 PF01979 Amidohydrolase family LFT47_03935 PF01425 Amidase LFT47_03940 PF17203 Single cache domain 3 LFT47_03940 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFT47_03940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_03940 PF00989 PAS fold LFT47_03945 PF00072 Response regulator receiver domain LFT47_03955 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LFT47_03980 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03985 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_03990 PF00005 ABC transporter LFT47_03990 PF08402 TOBE domain LFT47_03995 PF00459 Inositol monophosphatase family LFT47_04020 PF13520 Amino acid permease LFT47_04025 PF02623 FliW protein LFT47_04030 PF00669 Bacterial flagellin N-terminal helical region LFT47_04030 PF00700 Bacterial flagellin C-terminal helical region LFT47_04045 PF00700 Bacterial flagellin C-terminal helical region LFT47_04045 PF00669 Bacterial flagellin N-terminal helical region LFT47_04065 PF00460 Flagella basal body rod protein LFT47_04070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFT47_04070 PF00460 Flagella basal body rod protein LFT47_04075 PF02049 Flagellar hook-basal body complex protein FliE LFT47_04080 PF08345 Flagellar M-ring protein C-terminal LFT47_04080 PF01514 Secretory protein of YscJ/FliF family LFT47_04085 PF14842 FliG N-terminal domain LFT47_04085 PF14841 FliG middle domain LFT47_04085 PF01706 FliG C-terminal domain LFT47_04095 PF18269 T3SS EscN ATPase C-terminal domain LFT47_04095 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFT47_04095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFT47_04115 PF13860 FlgD Ig-like domain LFT47_04115 PF03963 Flagellar hook capping protein - N-terminal region LFT47_04115 PF13861 FlgD Tudor-like domain LFT47_04120 PF07559 Flagellar basal body protein FlaE LFT47_04120 PF00460 Flagella basal body rod protein LFT47_04120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFT47_04135 PF00107 Zinc-binding dehydrogenase LFT47_04135 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_04150 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT47_04155 PF00795 Carbon-nitrogen hydrolase LFT47_04160 PF00324 Amino acid permease LFT47_04165 PF00795 Carbon-nitrogen hydrolase LFT47_04175 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT47_04195 PF01569 PAP2 superfamily LFT47_04200 PF09335 SNARE associated Golgi protein LFT47_04205 PF00486 Transcriptional regulatory protein, C terminal LFT47_04205 PF00072 Response regulator receiver domain LFT47_04210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_04210 PF00512 His Kinase A (phospho-acceptor) domain LFT47_04240 PF08402 TOBE domain LFT47_04240 PF00005 ABC transporter LFT47_04245 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_04260 PF01618 MotA/TolQ/ExbB proton channel family LFT47_04265 PF13677 Membrane MotB of proton-channel complex MotA/MotB LFT47_04265 PF00691 OmpA family LFT47_04275 PF03459 TOBE domain LFT47_04295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFT47_04305 PF00813 FliP family LFT47_04310 PF01313 Bacterial export proteins, family 3 LFT47_04315 PF01311 Bacterial export proteins, family 1 LFT47_04320 PF01312 FlhB HrpN YscU SpaS Family LFT47_04325 PF00771 FHIPEP family LFT47_04335 PF02599 Global regulator protein family LFT47_04350 PF07690 Major Facilitator Superfamily LFT47_04355 PF00440 Bacterial regulatory proteins, tetR family LFT47_04360 PF02347 Glycine cleavage system P-protein LFT47_04365 PF01571 Aminomethyltransferase folate-binding domain LFT47_04365 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT47_04370 PF01597 Glycine cleavage H-protein LFT47_04375 PF00464 Serine hydroxymethyltransferase LFT47_04380 PF03313 Serine dehydratase alpha chain LFT47_04380 PF03315 Serine dehydratase beta chain LFT47_04385 PF00175 Oxidoreductase NAD-binding domain LFT47_04385 PF00042 Globin LFT47_04385 PF00970 Oxidoreductase FAD-binding domain LFT47_04405 PF04954 Siderophore-interacting protein LFT47_04405 PF08021 Siderophore-interacting FAD-binding domain LFT47_04410 PF03167 Uracil DNA glycosylase superfamily LFT47_04425 PF00313 'Cold-shock' DNA-binding domain LFT47_04435 PF00118 TCP-1/cpn60 chaperonin family LFT47_04440 PF00075 RNase H LFT47_04450 PF00512 His Kinase A (phospho-acceptor) domain LFT47_04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_04450 PF00672 HAMP domain LFT47_04455 PF00486 Transcriptional regulatory protein, C terminal LFT47_04455 PF00072 Response regulator receiver domain LFT47_04460 PF01810 LysE type translocator LFT47_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_04465 PF03466 LysR substrate binding domain LFT47_04490 PF00313 'Cold-shock' DNA-binding domain LFT47_04500 PF05977 Transmembrane secretion effector LFT47_04505 PF00266 Aminotransferase class-V LFT47_04510 PF02742 Iron dependent repressor, metal binding and dimerisation domain LFT47_04510 PF18357 Diphteria toxin repressor SH3 domain LFT47_04510 PF01325 Iron dependent repressor, N-terminal DNA binding domain LFT47_04515 PF01551 Peptidase family M23 LFT47_04515 PF04225 Opacity-associated protein A LysM-like domain LFT47_04530 PF12804 MobA-like NTP transferase domain LFT47_04545 PF00384 Molybdopterin oxidoreductase LFT47_04545 PF01568 Molydopterin dinucleotide binding domain LFT47_04550 PF02634 FdhD/NarQ family LFT47_04560 PF00005 ABC transporter LFT47_04565 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_04570 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT47_04585 PF00005 ABC transporter LFT47_04590 PF00664 ABC transporter transmembrane region LFT47_04590 PF00005 ABC transporter LFT47_04595 PF00990 Diguanylate cyclase, GGDEF domain LFT47_04600 PF00672 HAMP domain LFT47_04600 PF00512 His Kinase A (phospho-acceptor) domain LFT47_04600 PF01627 Hpt domain LFT47_04600 PF00072 Response regulator receiver domain LFT47_04600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LFT47_04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_04605 PF07238 PilZ domain LFT47_04605 PF03170 Bacterial cellulose synthase subunit LFT47_04605 PF03552 Cellulose synthase LFT47_04605 PF00535 Glycosyl transferase family 2 LFT47_04610 PF00293 NUDIX domain LFT47_04635 PF00563 EAL domain LFT47_04635 PF00990 Diguanylate cyclase, GGDEF domain LFT47_04635 PF03707 Bacterial signalling protein N terminal repeat LFT47_04655 PF00459 Inositol monophosphatase family LFT47_04660 PF02350 UDP-N-acetylglucosamine 2-epimerase LFT47_04710 PF00580 UvrD/REP helicase N-terminal domain LFT47_04710 PF13361 UvrD-like helicase C-terminal domain LFT47_04715 PF00549 CoA-ligase LFT47_04715 PF08442 ATP-grasp domain LFT47_04720 PF02629 CoA binding domain LFT47_04720 PF00549 CoA-ligase LFT47_04725 PF14552 Tautomerase enzyme LFT47_04730 PF00294 pfkB family carbohydrate kinase LFT47_04740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_04740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT47_04740 PF00205 Thiamine pyrophosphate enzyme, central domain LFT47_04745 PF00171 Aldehyde dehydrogenase family LFT47_04750 PF01261 Xylose isomerase-like TIM barrel LFT47_04755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_04755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_04760 PF01261 Xylose isomerase-like TIM barrel LFT47_04770 PF01740 STAS domain LFT47_04770 PF00916 Sulfate permease family LFT47_04785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_04785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_04790 PF00356 Bacterial regulatory proteins, lacI family LFT47_04800 PF02653 Branched-chain amino acid transport system / permease component LFT47_04805 PF00005 ABC transporter LFT47_04810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_04810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_04815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_04815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_04820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_04820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_04825 PF01261 Xylose isomerase-like TIM barrel LFT47_04830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_04830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_04835 PF04962 KduI/IolB family LFT47_04840 PF07702 UTRA domain LFT47_04840 PF00392 Bacterial regulatory proteins, gntR family LFT47_04855 PF07722 Peptidase C26 LFT47_04870 PF00557 Metallopeptidase family M24 LFT47_04870 PF01321 Creatinase/Prolidase N-terminal domain LFT47_04875 PF00083 Sugar (and other) transporter LFT47_04875 PF08946 Osmosensory transporter coiled coil LFT47_04880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LFT47_04885 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_04890 PF00571 CBS domain LFT47_04890 PF00005 ABC transporter LFT47_04895 PF00171 Aldehyde dehydrogenase family LFT47_04900 PF00732 GMC oxidoreductase LFT47_04900 PF05199 GMC oxidoreductase LFT47_04905 PF16350 FAD dependent oxidoreductase central domain LFT47_04905 PF01571 Aminomethyltransferase folate-binding domain LFT47_04905 PF01266 FAD dependent oxidoreductase LFT47_04905 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT47_04910 PF00355 Rieske [2Fe-2S] domain LFT47_04915 PF14759 Reductase C-terminal LFT47_04915 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_04920 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LFT47_04920 PF00355 Rieske [2Fe-2S] domain LFT47_04925 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_04925 PF00107 Zinc-binding dehydrogenase LFT47_04930 PF00753 Metallo-beta-lactamase superfamily LFT47_04935 PF09339 IclR helix-turn-helix domain LFT47_04935 PF01614 Bacterial transcriptional regulator LFT47_04945 PF07729 FCD domain LFT47_04945 PF00392 Bacterial regulatory proteins, gntR family LFT47_04950 PF00464 Serine hydroxymethyltransferase LFT47_04955 PF01266 FAD dependent oxidoreductase LFT47_04960 PF04267 Sarcosine oxidase, delta subunit family LFT47_04965 PF17806 Sarcosine oxidase A3 domain LFT47_04965 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFT47_04965 PF01571 Aminomethyltransferase folate-binding domain LFT47_04965 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_04970 PF04268 Sarcosine oxidase, gamma subunit family LFT47_04975 PF03315 Serine dehydratase beta chain LFT47_04975 PF03313 Serine dehydratase alpha chain LFT47_04980 PF00551 Formyl transferase LFT47_04995 PF01522 Polysaccharide deacetylase LFT47_05020 PF00474 Sodium:solute symporter family LFT47_05025 PF01381 Helix-turn-helix LFT47_05025 PF07883 Cupin domain LFT47_05030 PF00909 Ammonium Transporter Family LFT47_05035 PF00543 Nitrogen regulatory protein P-II LFT47_05045 PF13088 BNR repeat-like domain LFT47_05045 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase LFT47_05045 PF00754 F5/8 type C domain LFT47_05050 PF00491 Arginase family LFT47_05055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT47_05055 PF00205 Thiamine pyrophosphate enzyme, central domain LFT47_05055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_05065 PF07690 Major Facilitator Superfamily LFT47_05070 PF00664 ABC transporter transmembrane region LFT47_05070 PF00005 ABC transporter LFT47_05075 PF00664 ABC transporter transmembrane region LFT47_05075 PF00005 ABC transporter LFT47_05085 PF03932 CutC family LFT47_05095 PF07728 AAA domain (dynein-related subfamily) LFT47_05095 PF12102 Domain of unknown function (DUF3578) LFT47_05115 PF00672 HAMP domain LFT47_05115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_05115 PF00512 His Kinase A (phospho-acceptor) domain LFT47_05115 PF13426 PAS domain LFT47_05120 PF00486 Transcriptional regulatory protein, C terminal LFT47_05120 PF00072 Response regulator receiver domain LFT47_05130 PF04055 Radical SAM superfamily LFT47_05130 PF06968 Biotin and Thiamin Synthesis associated domain LFT47_05150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFT47_05165 PF02734 DAK2 domain LFT47_05165 PF02733 Dak1 domain LFT47_05170 PF02502 Ribose/Galactose Isomerase LFT47_05175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFT47_05175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFT47_05185 PF07690 Major Facilitator Superfamily LFT47_05190 PF00121 Triosephosphate isomerase LFT47_05205 PF00571 CBS domain LFT47_05210 PF17674 HHH domain LFT47_05210 PF00575 S1 RNA binding domain LFT47_05210 PF09371 Tex-like protein N-terminal domain LFT47_05210 PF16921 Tex protein YqgF-like domain LFT47_05225 PF00962 Adenosine/AMP deaminase LFT47_05275 PF07690 Major Facilitator Superfamily LFT47_05280 PF00440 Bacterial regulatory proteins, tetR family LFT47_05290 PF07690 Major Facilitator Superfamily LFT47_05310 PF13520 Amino acid permease LFT47_05315 PF10011 Predicted membrane protein (DUF2254) LFT47_05320 PF01381 Helix-turn-helix LFT47_05320 PF07883 Cupin domain LFT47_05325 PF00892 EamA-like transporter family LFT47_05330 PF04264 YceI-like domain LFT47_05335 PF00072 Response regulator receiver domain LFT47_05340 PF00005 ABC transporter LFT47_05345 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_05360 PF00248 Aldo/keto reductase family LFT47_05375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT47_05405 PF09369 Domain of unknown function (DUF1998) LFT47_05405 PF00271 Helicase conserved C-terminal domain LFT47_05405 PF00270 DEAD/DEAH box helicase LFT47_05410 PF12137 RNA polymerase recycling family C-terminal LFT47_05410 PF18339 RapA N-terminal Tudor like domain 1 LFT47_05410 PF00176 SNF2 family N-terminal domain LFT47_05410 PF00271 Helicase conserved C-terminal domain LFT47_05410 PF18337 RapA N-terminal Tudor like domain LFT47_05420 PF12102 Domain of unknown function (DUF3578) LFT47_05420 PF07728 AAA domain (dynein-related subfamily) LFT47_05445 PF07690 Major Facilitator Superfamily LFT47_05575 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_05595 PF00005 ABC transporter LFT47_05610 PF00313 'Cold-shock' DNA-binding domain LFT47_05625 PF00005 ABC transporter LFT47_05655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFT47_05655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFT47_05655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFT47_05660 PF13439 Glycosyltransferase Family 4 LFT47_05660 PF00534 Glycosyl transferases group 1 LFT47_05665 PF01522 Polysaccharide deacetylase LFT47_05675 PF15975 Flotillin LFT47_05675 PF01145 SPFH domain / Band 7 family LFT47_05680 PF01494 FAD binding domain LFT47_05685 PF07690 Major Facilitator Superfamily LFT47_05695 PF07883 Cupin domain LFT47_05700 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT47_05725 PF00551 Formyl transferase LFT47_05730 PF00083 Sugar (and other) transporter LFT47_05735 PF01380 SIS domain LFT47_05745 PF01808 AICARFT/IMPCHase bienzyme LFT47_05745 PF02142 MGS-like domain LFT47_05760 PF03971 Monomeric isocitrate dehydrogenase LFT47_05765 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_05780 PF13419 Haloacid dehalogenase-like hydrolase LFT47_05815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_05815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_05825 PF00005 ABC transporter LFT47_05830 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_05835 PF00005 ABC transporter LFT47_05840 PF02687 FtsX-like permease family LFT47_05840 PF12704 MacB-like periplasmic core domain LFT47_05840 PF00005 ABC transporter LFT47_05845 PF13407 Periplasmic binding protein domain LFT47_05850 PF02653 Branched-chain amino acid transport system / permease component LFT47_05855 PF00005 ABC transporter LFT47_05860 PF01047 MarR family LFT47_05860 PF00480 ROK family LFT47_05865 PF00795 Carbon-nitrogen hydrolase LFT47_05885 PF00005 ABC transporter LFT47_05900 PF01168 Alanine racemase, N-terminal domain LFT47_05900 PF00842 Alanine racemase, C-terminal domain LFT47_05905 PF13520 Amino acid permease LFT47_05910 PF01593 Flavin containing amine oxidoreductase LFT47_05910 PF02027 RolB/RolC glucosidase family LFT47_05915 PF00132 Bacterial transferase hexapeptide (six repeats) LFT47_05925 PF00551 Formyl transferase LFT47_05930 PF00464 Serine hydroxymethyltransferase LFT47_05935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LFT47_05935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LFT47_05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_05940 PF07730 Histidine kinase LFT47_05945 PF00196 Bacterial regulatory proteins, luxR family LFT47_05945 PF00072 Response regulator receiver domain LFT47_05955 PF00005 ABC transporter LFT47_05980 PF00579 tRNA synthetases class I (W and Y) LFT47_06000 PF13085 2Fe-2S iron-sulfur cluster binding domain LFT47_06005 PF00890 FAD binding domain LFT47_06005 PF02910 Fumarate reductase flavoprotein C-term LFT47_06015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LFT47_06020 PF00483 Nucleotidyl transferase LFT47_06020 PF01050 Mannose-6-phosphate isomerase LFT47_06025 PF01546 Peptidase family M20/M25/M40 LFT47_06025 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFT47_06030 PF01047 MarR family LFT47_06035 PF02566 OsmC-like protein LFT47_06040 PF00107 Zinc-binding dehydrogenase LFT47_06040 PF16884 N-terminal domain of oxidoreductase LFT47_06045 PF02608 ABC transporter substrate-binding protein PnrA-like LFT47_06050 PF00005 ABC transporter LFT47_06055 PF02653 Branched-chain amino acid transport system / permease component LFT47_06060 PF02653 Branched-chain amino acid transport system / permease component LFT47_06065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFT47_06070 PF02885 Glycosyl transferase family, helical bundle domain LFT47_06070 PF00591 Glycosyl transferase family, a/b domain LFT47_06070 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LFT47_06075 PF09335 SNARE associated Golgi protein LFT47_06080 PF09335 SNARE associated Golgi protein LFT47_06085 PF00962 Adenosine/AMP deaminase LFT47_06090 PF03819 MazG nucleotide pyrophosphohydrolase domain LFT47_06095 PF03952 Enolase, N-terminal domain LFT47_06095 PF00113 Enolase, C-terminal TIM barrel domain LFT47_06110 PF02541 Ppx/GppA phosphatase family LFT47_06115 PF00082 Subtilase family LFT47_06120 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_06135 PF13458 Periplasmic binding protein LFT47_06140 PF02653 Branched-chain amino acid transport system / permease component LFT47_06145 PF02653 Branched-chain amino acid transport system / permease component LFT47_06145 PF11862 Domain of unknown function (DUF3382) LFT47_06150 PF00005 ABC transporter LFT47_06150 PF12399 Branched-chain amino acid ATP-binding cassette transporter LFT47_06155 PF00005 ABC transporter LFT47_06165 PF00108 Thiolase, N-terminal domain LFT47_06165 PF02803 Thiolase, C-terminal domain LFT47_06170 PF00288 GHMP kinases N terminal domain LFT47_06170 PF08544 GHMP kinases C terminal LFT47_06170 PF10509 Galactokinase galactose-binding signature LFT47_06175 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LFT47_06175 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LFT47_06180 PF01263 Aldose 1-epimerase LFT47_06185 PF01594 AI-2E family transporter LFT47_06190 PF13291 ACT domain LFT47_06190 PF00291 Pyridoxal-phosphate dependent enzyme LFT47_06195 PF01272 Transcription elongation factor, GreA/GreB, C-term LFT47_06195 PF03449 Transcription elongation factor, N-terminal LFT47_06205 PF02585 GlcNAc-PI de-N-acetylase LFT47_06215 PF03190 Protein of unknown function, DUF255 LFT47_06220 PF03006 Haemolysin-III related LFT47_06225 PF01255 Putative undecaprenyl diphosphate synthase LFT47_06230 PF02562 PhoH-like protein LFT47_06230 PF13638 PIN domain LFT47_06260 PF07690 Major Facilitator Superfamily LFT47_06270 PF00206 Lyase LFT47_06270 PF10415 Fumarase C C-terminus LFT47_06275 PF00484 Carbonic anhydrase LFT47_06285 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LFT47_06300 PF01238 Phosphomannose isomerase type I LFT47_06305 PF00731 AIR carboxylase LFT47_06310 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LFT47_06310 PF02222 ATP-grasp domain LFT47_06325 PF02467 Transcription factor WhiB LFT47_06330 PF00534 Glycosyl transferases group 1 LFT47_06330 PF00535 Glycosyl transferase family 2 LFT47_06355 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LFT47_06355 PF05221 S-adenosyl-L-homocysteine hydrolase LFT47_06360 PF17964 Bacterial Ig domain LFT47_06360 PF03734 L,D-transpeptidase catalytic domain LFT47_06365 PF17964 Bacterial Ig domain LFT47_06365 PF03734 L,D-transpeptidase catalytic domain LFT47_06385 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase LFT47_06385 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LFT47_06390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFT47_06395 PF00171 Aldehyde dehydrogenase family LFT47_06400 PF13559 Domain of unknown function (DUF4129) LFT47_06400 PF01841 Transglutaminase-like superfamily LFT47_06400 PF11992 Domain of unknown function (DUF3488) LFT47_06410 PF07726 ATPase family associated with various cellular activities (AAA) LFT47_06410 PF17863 AAA lid domain LFT47_06415 PF01026 TatD related DNase LFT47_06420 PF07501 G5 domain LFT47_06420 PF03990 G5-linked-Ubiquitin-like domain LFT47_06420 PF06737 Transglycosylase-like domain LFT47_06425 PF00398 Ribosomal RNA adenine dimethylase LFT47_06430 PF00288 GHMP kinases N terminal domain LFT47_06430 PF08544 GHMP kinases C terminal LFT47_06435 PF16326 ABC transporter C-terminal domain LFT47_06435 PF00005 ABC transporter LFT47_06435 PF12848 ABC transporter LFT47_06440 PF00440 Bacterial regulatory proteins, tetR family LFT47_06440 PF17932 Tetracyclin repressor-like, C-terminal domain LFT47_06450 PF12804 MobA-like NTP transferase domain LFT47_06450 PF00132 Bacterial transferase hexapeptide (six repeats) LFT47_06455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LFT47_06455 PF14572 Phosphoribosyl synthetase-associated domain LFT47_06460 PF01386 Ribosomal L25p family LFT47_06460 PF14693 Ribosomal protein TL5, C-terminal domain LFT47_06465 PF01195 Peptidyl-tRNA hydrolase LFT47_06470 PF00196 Bacterial regulatory proteins, luxR family LFT47_06475 PF00196 Bacterial regulatory proteins, luxR family LFT47_06475 PF00072 Response regulator receiver domain LFT47_06490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFT47_06490 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFT47_06495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFT47_06495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFT47_06495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFT47_06500 PF01370 NAD dependent epimerase/dehydratase family LFT47_06510 PF02839 Carbohydrate binding domain LFT47_06540 PF00266 Aminotransferase class-V LFT47_06545 PF01592 NifU-like N terminal domain LFT47_06555 PF06965 Na+/H+ antiporter 1 LFT47_06570 PF02559 CarD-like/TRCF domain LFT47_06570 PF00270 DEAD/DEAH box helicase LFT47_06570 PF00271 Helicase conserved C-terminal domain LFT47_06570 PF03461 TRCF domain LFT47_06570 PF17757 UvrB interaction domain LFT47_06575 PF04307 LexA-binding, inner membrane-associated putative hydrolase LFT47_06605 PF01791 DeoC/LacD family aldolase LFT47_06610 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_06610 PF18113 Rubredoxin binding C-terminal domain LFT47_06615 PF00356 Bacterial regulatory proteins, lacI family LFT47_06620 PF00083 Sugar (and other) transporter LFT47_06630 PF10414 Sirohaem synthase dimerisation region LFT47_06630 PF14824 Sirohaem biosynthesis protein central LFT47_06630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFT47_06635 PF04324 BFD-like [2Fe-2S] binding domain LFT47_06635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFT47_06635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFT47_06635 PF18267 Rubredoxin NAD+ reductase C-terminal domain LFT47_06635 PF13806 Rieske-like [2Fe-2S] domain LFT47_06635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_06645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFT47_06645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFT47_06645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFT47_06645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFT47_06650 PF08244 Glycosyl hydrolases family 32 C terminal LFT47_06650 PF00251 Glycosyl hydrolases family 32 N-terminal domain LFT47_06655 PF02435 Levansucrase/Invertase LFT47_06675 PF00005 ABC transporter LFT47_06685 PF01048 Phosphorylase superfamily LFT47_06690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFT47_06690 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_06735 PF14759 Reductase C-terminal LFT47_06735 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_06740 PF01568 Molydopterin dinucleotide binding domain LFT47_06740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFT47_06740 PF00384 Molybdopterin oxidoreductase LFT47_06745 PF07690 Major Facilitator Superfamily LFT47_06750 PF00083 Sugar (and other) transporter LFT47_06750 PF07690 Major Facilitator Superfamily LFT47_06755 PF00289 Biotin carboxylase, N-terminal domain LFT47_06755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT47_06755 PF00364 Biotin-requiring enzyme LFT47_06755 PF02785 Biotin carboxylase C-terminal domain LFT47_06760 PF02545 Maf-like protein LFT47_06765 PF03176 MMPL family LFT47_06770 PF00440 Bacterial regulatory proteins, tetR family LFT47_06775 PF01906 Putative heavy-metal-binding LFT47_06780 PF00375 Sodium:dicarboxylate symporter family LFT47_06795 PF01039 Carboxyl transferase domain LFT47_06805 PF08279 HTH domain LFT47_06805 PF03099 Biotin/lipoate A/B protein ligase family LFT47_06805 PF02237 Biotin protein ligase C terminal domain LFT47_06815 PF00211 Adenylate and Guanylate cyclase catalytic domain LFT47_06815 PF16701 Adenylate cyclase regulatory domain LFT47_06830 PF12826 Helix-hairpin-helix motif LFT47_06830 PF03120 NAD-dependent DNA ligase OB-fold domain LFT47_06830 PF01653 NAD-dependent DNA ligase adenylation domain LFT47_06830 PF00533 BRCA1 C Terminus (BRCT) domain LFT47_06830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LFT47_06835 PF00459 Inositol monophosphatase family LFT47_06840 PF00296 Luciferase-like monooxygenase LFT47_06845 PF00583 Acetyltransferase (GNAT) family LFT47_06850 PF01042 Endoribonuclease L-PSP LFT47_06855 PF00072 Response regulator receiver domain LFT47_06860 PF00989 PAS fold LFT47_06860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFT47_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_06860 PF17203 Single cache domain 3 LFT47_06865 PF03600 Citrate transporter LFT47_06870 PF02686 Glu-tRNAGln amidotransferase C subunit LFT47_06875 PF01425 Amidase LFT47_06880 PF02637 GatB domain LFT47_06880 PF02934 GatB/GatE catalytic domain LFT47_06890 PF00356 Bacterial regulatory proteins, lacI family LFT47_06900 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_06905 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_06925 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_06925 PF00107 Zinc-binding dehydrogenase LFT47_06930 PF00155 Aminotransferase class I and II LFT47_06935 PF11975 Family 4 glycosyl hydrolase C-terminal domain LFT47_06935 PF02056 Family 4 glycosyl hydrolase LFT47_06950 PF01979 Amidohydrolase family LFT47_06960 PF00480 ROK family LFT47_06960 PF01047 MarR family LFT47_06965 PF00294 pfkB family carbohydrate kinase LFT47_06970 PF01116 Fructose-bisphosphate aldolase class-II LFT47_06975 PF00455 DeoR C terminal sensor domain LFT47_06975 PF08220 DeoR-like helix-turn-helix domain LFT47_06980 PF00300 Histidine phosphatase superfamily (branch 1) LFT47_06995 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT47_07000 PF00561 alpha/beta hydrolase fold LFT47_07030 PF03129 Anticodon binding domain LFT47_07030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT47_07040 PF08031 Berberine and berberine like LFT47_07040 PF01565 FAD binding domain LFT47_07050 PF00005 ABC transporter LFT47_07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_07060 PF07730 Histidine kinase LFT47_07065 PF00072 Response regulator receiver domain LFT47_07065 PF00196 Bacterial regulatory proteins, luxR family LFT47_07070 PF01207 Dihydrouridine synthase (Dus) LFT47_07075 PF13286 Phosphohydrolase-associated domain LFT47_07075 PF01966 HD domain LFT47_07080 PF01807 CHC2 zinc finger LFT47_07080 PF08275 DNA primase catalytic core, N-terminal domain LFT47_07080 PF13662 Toprim domain LFT47_07080 PF08278 DNA primase DnaG DnaB-binding LFT47_07080 PF10410 DnaB-helicase binding domain of primase LFT47_07090 PF01522 Polysaccharide deacetylase LFT47_07090 PF00963 Cohesin domain LFT47_07095 PF00753 Metallo-beta-lactamase superfamily LFT47_07115 PF07690 Major Facilitator Superfamily LFT47_07125 PF01066 CDP-alcohol phosphatidyltransferase LFT47_07135 PF00534 Glycosyl transferases group 1 LFT47_07135 PF08323 Starch synthase catalytic domain LFT47_07145 PF00963 Cohesin domain LFT47_07145 PF01522 Polysaccharide deacetylase LFT47_07155 PF07859 alpha/beta hydrolase fold LFT47_07160 PF04545 Sigma-70, region 4 LFT47_07160 PF04542 Sigma-70 region 2 LFT47_07175 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_07175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_07175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_07185 PF00318 Ribosomal protein S2 LFT47_07190 PF00889 Elongation factor TS LFT47_07195 PF00696 Amino acid kinase family LFT47_07200 PF01765 Ribosome recycling factor LFT47_07215 PF00474 Sodium:solute symporter family LFT47_07225 PF04397 LytTr DNA-binding domain LFT47_07225 PF00072 Response regulator receiver domain LFT47_07230 PF07694 5TMR of 5TMR-LYT LFT47_07230 PF06580 Histidine kinase LFT47_07240 PF00474 Sodium:solute symporter family LFT47_07255 PF01037 Lrp/AsnC ligand binding domain LFT47_07260 PF00676 Dehydrogenase E1 component LFT47_07265 PF02780 Transketolase, C-terminal domain LFT47_07265 PF02779 Transketolase, pyrimidine binding domain LFT47_07270 PF02817 e3 binding domain LFT47_07270 PF00364 Biotin-requiring enzyme LFT47_07270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT47_07280 PF01039 Carboxyl transferase domain LFT47_07285 PF00364 Biotin-requiring enzyme LFT47_07285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT47_07285 PF00289 Biotin carboxylase, N-terminal domain LFT47_07285 PF02785 Biotin carboxylase C-terminal domain LFT47_07290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_07290 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_07290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_07295 PF01144 Coenzyme A transferase LFT47_07300 PF01144 Coenzyme A transferase LFT47_07310 PF03328 HpcH/HpaI aldolase/citrate lyase family LFT47_07320 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LFT47_07320 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LFT47_07320 PF13288 DXP reductoisomerase C-terminal domain LFT47_07325 PF02163 Peptidase family M50 LFT47_07325 PF17820 PDZ domain LFT47_07335 PF04551 GcpE protein LFT47_07345 PF00440 Bacterial regulatory proteins, tetR family LFT47_07355 PF00005 ABC transporter LFT47_07360 PF03129 Anticodon binding domain LFT47_07360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT47_07360 PF04073 Aminoacyl-tRNA editing domain LFT47_07365 PF01925 Sulfite exporter TauE/SafE LFT47_07370 PF00282 Pyridoxal-dependent decarboxylase conserved domain LFT47_07390 PF02576 RimP N-terminal domain LFT47_07390 PF17384 RimP C-terminal SH3 domain LFT47_07395 PF08529 NusA N-terminal domain LFT47_07395 PF13184 NusA-like KH domain LFT47_07405 PF11987 Translation-initiation factor 2 LFT47_07405 PF04760 Translation initiation factor IF-2, N-terminal region LFT47_07405 PF00009 Elongation factor Tu GTP binding domain LFT47_07410 PF02033 Ribosome-binding factor A LFT47_07415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFT47_07420 PF00155 Aminotransferase class I and II LFT47_07425 PF16198 tRNA pseudouridylate synthase B C-terminal domain LFT47_07425 PF09142 tRNA Pseudouridine synthase II, C terminal LFT47_07425 PF01509 TruB family pseudouridylate synthase (N terminal domain) LFT47_07440 PF01687 Riboflavin kinase LFT47_07440 PF06574 FAD synthetase LFT47_07445 PF03301 Tryptophan 2,3-dioxygenase LFT47_07450 PF00312 Ribosomal protein S15 LFT47_07455 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LFT47_07455 PF00575 S1 RNA binding domain LFT47_07455 PF01138 3' exoribonuclease family, domain 1 LFT47_07455 PF00013 KH domain LFT47_07460 PF00675 Insulinase (Peptidase family M16) LFT47_07460 PF05193 Peptidase M16 inactive domain LFT47_07480 PF06463 Molybdenum Cofactor Synthesis C LFT47_07480 PF04055 Radical SAM superfamily LFT47_07485 PF00072 Response regulator receiver domain LFT47_07485 PF00486 Transcriptional regulatory protein, C terminal LFT47_07490 PF16736 Single Cache-like LFT47_07490 PF00512 His Kinase A (phospho-acceptor) domain LFT47_07490 PF00989 PAS fold LFT47_07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_07500 PF00994 Probable molybdopterin binding domain LFT47_07500 PF03453 MoeA N-terminal region (domain I and II) LFT47_07500 PF03454 MoeA C-terminal region (domain IV) LFT47_07505 PF01967 MoaC family LFT47_07510 PF00994 Probable molybdopterin binding domain LFT47_07515 PF02391 MoaE protein LFT47_07520 PF01113 Dihydrodipicolinate reductase, N-terminus LFT47_07520 PF05173 Dihydrodipicolinate reductase, C-terminus LFT47_07535 PF00701 Dihydrodipicolinate synthetase family LFT47_07540 PF17770 Ribonuclease J C-terminal domain LFT47_07540 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LFT47_07540 PF12706 Beta-lactamase superfamily domain LFT47_07545 PF09397 Ftsk gamma domain LFT47_07545 PF01580 FtsK/SpoIIIE family LFT47_07545 PF17854 FtsK alpha domain LFT47_07550 PF01066 CDP-alcohol phosphatidyltransferase LFT47_07555 PF00994 Probable molybdopterin binding domain LFT47_07555 PF18146 Damage-inducible protein CinA KH domain LFT47_07555 PF02464 Competence-damaged protein LFT47_07575 PF00154 recA bacterial DNA recombination protein LFT47_07580 PF02631 RecX family LFT47_07590 PF00919 Uncharacterized protein family UPF0004 LFT47_07590 PF04055 Radical SAM superfamily LFT47_07590 PF01938 TRAM domain LFT47_07600 PF01678 Diaminopimelate epimerase LFT47_07605 PF05175 Methyltransferase small domain LFT47_07610 PF01926 50S ribosome-binding GTPase LFT47_07610 PF13167 GTP-binding GTPase N-terminal LFT47_07610 PF16360 GTP-binding GTPase Middle Region LFT47_07615 PF13307 Helicase C-terminal domain LFT47_07620 PF00717 Peptidase S24-like LFT47_07620 PF01726 LexA DNA binding domain LFT47_07630 PF00155 Aminotransferase class I and II LFT47_07635 PF00475 Imidazoleglycerol-phosphate dehydratase LFT47_07640 PF00117 Glutamine amidotransferase class-I LFT47_07650 PF00977 Histidine biosynthesis protein LFT47_07670 PF05198 Translation initiation factor IF-3, N-terminal domain LFT47_07670 PF00707 Translation initiation factor IF-3, C-terminal domain LFT47_07675 PF01632 Ribosomal protein L35 LFT47_07680 PF00453 Ribosomal protein L20 LFT47_07685 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFT47_07685 PF00588 SpoU rRNA Methylase family LFT47_07690 PF16916 Dimerisation domain of Zinc Transporter LFT47_07690 PF01545 Cation efflux family LFT47_07695 PF07690 Major Facilitator Superfamily LFT47_07700 PF00293 NUDIX domain LFT47_07705 PF04055 Radical SAM superfamily LFT47_07710 PF01470 Pyroglutamyl peptidase LFT47_07720 PF01409 tRNA synthetases class II core domain (F) LFT47_07720 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LFT47_07725 PF03147 Ferredoxin-fold anticodon binding domain LFT47_07725 PF03483 B3/4 domain LFT47_07725 PF03484 tRNA synthetase B5 domain LFT47_07725 PF01588 Putative tRNA binding domain LFT47_07725 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LFT47_07740 PF07993 Male sterility protein LFT47_07740 PF00501 AMP-binding enzyme LFT47_07740 PF13193 AMP-binding enzyme C-terminal domain LFT47_07740 PF00668 Condensation domain LFT47_07740 PF00550 Phosphopantetheine attachment site LFT47_07745 PF00107 Zinc-binding dehydrogenase LFT47_07745 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_07755 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFT47_07755 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFT47_07760 PF01960 ArgJ family LFT47_07765 PF00696 Amino acid kinase family LFT47_07770 PF00202 Aminotransferase class-III LFT47_07775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFT47_07775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFT47_07780 PF01316 Arginine repressor, DNA binding domain LFT47_07780 PF02863 Arginine repressor, C-terminal domain LFT47_07785 PF00764 Arginosuccinate synthase LFT47_07790 PF14698 Argininosuccinate lyase C-terminal LFT47_07790 PF00206 Lyase LFT47_07800 PF12833 Helix-turn-helix domain LFT47_07800 PF02805 Metal binding domain of Ada LFT47_07800 PF06029 AlkA N-terminal domain LFT47_07800 PF00730 HhH-GPD superfamily base excision DNA repair protein LFT47_07805 PF02245 Methylpurine-DNA glycosylase (MPG) LFT47_07820 PF00579 tRNA synthetases class I (W and Y) LFT47_07850 PF13344 Haloacid dehalogenase-like hydrolase LFT47_07850 PF18407 GCN5-related N-acetyltransferase like domain LFT47_07860 PF01728 FtsJ-like methyltransferase LFT47_07860 PF01479 S4 domain LFT47_07865 PF01513 ATP-NAD kinase LFT47_07870 PF02463 RecF/RecN/SMC N terminal domain LFT47_07875 PF06418 CTP synthase N-terminus LFT47_07875 PF00117 Glutamine amidotransferase class-I LFT47_07880 PF00293 NUDIX domain LFT47_07885 PF02899 Phage integrase, N-terminal SAM-like domain LFT47_07885 PF00589 Phage integrase family LFT47_07900 PF00285 Citrate synthase, C-terminal domain LFT47_07910 PF03972 MmgE/PrpD family LFT47_07915 PF07729 FCD domain LFT47_07915 PF00392 Bacterial regulatory proteins, gntR family LFT47_07920 PF00072 Response regulator receiver domain LFT47_07925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFT47_07925 PF17203 Single cache domain 3 LFT47_07925 PF00989 PAS fold LFT47_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_07930 PF00375 Sodium:dicarboxylate symporter family LFT47_07935 PF13614 AAA domain LFT47_07940 PF02616 Segregation and condensation protein ScpA LFT47_07945 PF04079 Segregation and condensation complex subunit ScpB LFT47_07950 PF00849 RNA pseudouridylate synthase LFT47_07950 PF01479 S4 domain LFT47_07955 PF02153 Prephenate dehydrogenase LFT47_07960 PF02224 Cytidylate kinase LFT47_07970 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LFT47_07970 PF01926 50S ribosome-binding GTPase LFT47_07985 PF08274 PhnA Zinc-Ribbon LFT47_07985 PF03831 PhnA domain LFT47_07990 PF01047 MarR family LFT47_07995 PF07690 Major Facilitator Superfamily LFT47_08000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT47_08000 PF06827 Zinc finger found in FPG and IleRS LFT47_08005 PF01597 Glycine cleavage H-protein LFT47_08010 PF00498 FHA domain LFT47_08015 PF00376 MerR family regulatory protein LFT47_08020 PF02577 Bifunctional nuclease LFT47_08025 PF13411 MerR HTH family regulatory protein LFT47_08030 PF13614 AAA domain LFT47_08030 PF00376 MerR family regulatory protein LFT47_08035 PF00682 HMGL-like LFT47_08035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT47_08035 PF02436 Conserved carboxylase domain LFT47_08035 PF00289 Biotin carboxylase, N-terminal domain LFT47_08035 PF02785 Biotin carboxylase C-terminal domain LFT47_08035 PF00364 Biotin-requiring enzyme LFT47_08040 PF00501 AMP-binding enzyme LFT47_08045 PF00480 ROK family LFT47_08055 PF12146 Serine aminopeptidase, S33 LFT47_08065 PF01474 Class-II DAHP synthetase family LFT47_08075 PF05257 CHAP domain LFT47_08075 PF01476 LysM domain LFT47_08085 PF00348 Polyprenyl synthetase LFT47_08095 PF11799 impB/mucB/samB family C-terminal domain LFT47_08095 PF00817 impB/mucB/samB family LFT47_08105 PF02381 MraZ protein, putative antitoxin-like LFT47_08110 PF01795 MraW methylase family LFT47_08120 PF03717 Penicillin-binding Protein dimerisation domain LFT47_08120 PF00905 Penicillin binding protein transpeptidase domain LFT47_08125 PF08245 Mur ligase middle domain LFT47_08125 PF01225 Mur ligase family, catalytic domain LFT47_08125 PF02875 Mur ligase family, glutamate ligase domain LFT47_08130 PF02875 Mur ligase family, glutamate ligase domain LFT47_08130 PF08245 Mur ligase middle domain LFT47_08130 PF01225 Mur ligase family, catalytic domain LFT47_08135 PF00953 Glycosyl transferase family 4 LFT47_08140 PF02875 Mur ligase family, glutamate ligase domain LFT47_08140 PF08245 Mur ligase middle domain LFT47_08145 PF01098 Cell cycle protein LFT47_08150 PF03033 Glycosyltransferase family 28 N-terminal domain LFT47_08150 PF04101 Glycosyltransferase family 28 C-terminal domain LFT47_08155 PF01225 Mur ligase family, catalytic domain LFT47_08155 PF02875 Mur ligase family, glutamate ligase domain LFT47_08155 PF08245 Mur ligase middle domain LFT47_08160 PF08478 POTRA domain, FtsQ-type LFT47_08165 PF00091 Tubulin/FtsZ family, GTPase domain LFT47_08165 PF12327 FtsZ family, C-terminal domain LFT47_08170 PF02578 Multi-copper polyphenol oxidoreductase laccase LFT47_08175 PF01168 Alanine racemase, N-terminal domain LFT47_08180 PF04472 Cell division protein SepF LFT47_08190 PF05103 DivIVA protein LFT47_08195 PF01252 Signal peptidase (SPase) II LFT47_08200 PF00849 RNA pseudouridylate synthase LFT47_08205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LFT47_08205 PF07733 Bacterial DNA polymerase III alpha NTPase domain LFT47_08205 PF02811 PHP domain LFT47_08205 PF14579 Helix-hairpin-helix motif LFT47_08220 PF00815 Histidinol dehydrogenase LFT47_08225 PF03477 ATP cone domain LFT47_08235 PF00480 ROK family LFT47_08240 PF00557 Metallopeptidase family M24 LFT47_08250 PF02548 Ketopantoate hydroxymethyltransferase LFT47_08255 PF03951 Glutamine synthetase, beta-Grasp domain LFT47_08255 PF00120 Glutamine synthetase, catalytic domain LFT47_08260 PF03710 Glutamate-ammonia ligase adenylyltransferase LFT47_08260 PF08335 GlnD PII-uridylyltransferase LFT47_08285 PF00120 Glutamine synthetase, catalytic domain LFT47_08285 PF03951 Glutamine synthetase, beta-Grasp domain LFT47_08300 PF04055 Radical SAM superfamily LFT47_08300 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LFT47_08305 PF03099 Biotin/lipoate A/B protein ligase family LFT47_08310 PF00069 Protein kinase domain LFT47_08315 PF01370 NAD dependent epimerase/dehydratase family LFT47_08315 PF08338 Domain of unknown function (DUF1731) LFT47_08320 PF03572 Peptidase family S41 LFT47_08320 PF07676 WD40-like Beta Propeller Repeat LFT47_08320 PF14685 Tricorn protease PDZ domain LFT47_08320 PF14684 Tricorn protease C1 domain LFT47_08325 PF02566 OsmC-like protein LFT47_08335 PF02817 e3 binding domain LFT47_08335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT47_08335 PF00364 Biotin-requiring enzyme LFT47_08340 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_08340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFT47_08345 PF00883 Cytosol aminopeptidase family, catalytic domain LFT47_08345 PF02789 Cytosol aminopeptidase family, N-terminal domain LFT47_08365 PF04545 Sigma-70, region 4 LFT47_08365 PF04539 Sigma-70 region 3 LFT47_08365 PF00140 Sigma-70 factor, region 1.2 LFT47_08365 PF04542 Sigma-70 region 2 LFT47_08370 PF00155 Aminotransferase class I and II LFT47_08370 PF00392 Bacterial regulatory proteins, gntR family LFT47_08390 PF00204 DNA gyrase B LFT47_08390 PF00986 DNA gyrase B subunit, carboxyl terminus LFT47_08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_08390 PF01751 Toprim domain LFT47_08400 PF03965 Penicillinase repressor LFT47_08405 PF01654 Cytochrome bd terminal oxidase subunit I LFT47_08410 PF02322 Cytochrome bd terminal oxidase subunit II LFT47_08415 PF00005 ABC transporter LFT47_08415 PF00664 ABC transporter transmembrane region LFT47_08420 PF03060 Nitronate monooxygenase LFT47_08435 PF03989 DNA gyrase C-terminal domain, beta-propeller LFT47_08435 PF00521 DNA gyrase/topoisomerase IV, subunit A LFT47_08440 PF00583 Acetyltransferase (GNAT) family LFT47_08440 PF13380 CoA binding domain LFT47_08440 PF13607 Succinyl-CoA ligase like flavodoxin domain LFT47_08455 PF00265 Thymidine kinase LFT47_08460 PF11268 Protein of unknown function (DUF3071) LFT47_08475 PF00692 dUTPase LFT47_08495 PF02080 TrkA-C domain LFT47_08495 PF02254 TrkA-N domain LFT47_08500 PF02080 TrkA-C domain LFT47_08500 PF02254 TrkA-N domain LFT47_08505 PF13520 Amino acid permease LFT47_08510 PF05958 tRNA (Uracil-5-)-methyltransferase LFT47_08510 PF01938 TRAM domain LFT47_08515 PF00694 Aconitase C-terminal domain LFT47_08515 PF00330 Aconitase family (aconitate hydratase) LFT47_08520 PF02779 Transketolase, pyrimidine binding domain LFT47_08520 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LFT47_08520 PF02780 Transketolase, C-terminal domain LFT47_08535 PF00248 Aldo/keto reductase family LFT47_08540 PF01156 Inosine-uridine preferring nucleoside hydrolase LFT47_08545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFT47_08545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFT47_08545 PF00378 Enoyl-CoA hydratase/isomerase LFT47_08550 PF02803 Thiolase, C-terminal domain LFT47_08550 PF00108 Thiolase, N-terminal domain LFT47_08555 PF00570 HRDC domain LFT47_08555 PF01612 3'-5' exonuclease LFT47_08565 PF01212 Beta-eliminating lyase LFT47_08580 PF01641 SelR domain LFT47_08595 PF04073 Aminoacyl-tRNA editing domain LFT47_08600 PF02657 Fe-S metabolism associated domain LFT47_08605 PF00581 Rhodanese-like domain LFT47_08615 PF03594 Benzoate membrane transport protein LFT47_08625 PF13520 Amino acid permease LFT47_08665 PF17151 Periplasmic sensor domain LFT47_08665 PF00990 Diguanylate cyclase, GGDEF domain LFT47_08675 PF01327 Polypeptide deformylase LFT47_08680 PF00551 Formyl transferase LFT47_08680 PF02911 Formyl transferase, C-terminal domain LFT47_08685 PF01029 NusB family LFT47_08685 PF01189 16S rRNA methyltransferase RsmB/F LFT47_08690 PF00834 Ribulose-phosphate 3 epimerase family LFT47_08700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFT47_08700 PF01872 RibD C-terminal domain LFT47_08705 PF00677 Lumazine binding domain LFT47_08710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFT47_08710 PF00925 GTP cyclohydrolase II LFT47_08715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFT47_08715 PF00925 GTP cyclohydrolase II LFT47_08720 PF00885 6,7-dimethyl-8-ribityllumazine synthase LFT47_08725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LFT47_08730 PF08029 HisG, C-terminal domain LFT47_08730 PF01634 ATP phosphoribosyltransferase LFT47_08735 PF00977 Histidine biosynthesis protein LFT47_08745 PF01502 Phosphoribosyl-AMP cyclohydrolase LFT47_08750 PF04715 Anthranilate synthase component I, N terminal region LFT47_08750 PF00425 chorismate binding enzyme LFT47_08765 PF00218 Indole-3-glycerol phosphate synthase LFT47_08770 PF00291 Pyridoxal-phosphate dependent enzyme LFT47_08775 PF00290 Tryptophan synthase alpha chain LFT47_08780 PF01790 Prolipoprotein diacylglyceryl transferase LFT47_08785 PF01493 GXGXG motif LFT47_08785 PF04898 Glutamate synthase central domain LFT47_08785 PF01645 Conserved region in glutamate synthase LFT47_08785 PF00310 Glutamine amidotransferases class-II LFT47_08790 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFT47_08790 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_08795 PF00224 Pyruvate kinase, barrel domain LFT47_08795 PF02887 Pyruvate kinase, alpha/beta domain LFT47_08800 PF03861 ANTAR domain LFT47_08800 PF00072 Response regulator receiver domain LFT47_08815 PF00392 Bacterial regulatory proteins, gntR family LFT47_08815 PF07729 FCD domain LFT47_08835 PF00248 Aldo/keto reductase family LFT47_08845 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_08850 PF08402 TOBE domain LFT47_08850 PF00005 ABC transporter LFT47_08860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT47_08860 PF13378 Enolase C-terminal domain-like LFT47_08865 PF04909 Amidohydrolase LFT47_08915 PF00392 Bacterial regulatory proteins, gntR family LFT47_08915 PF07729 FCD domain LFT47_08920 PF09339 IclR helix-turn-helix domain LFT47_08920 PF01614 Bacterial transcriptional regulator LFT47_08925 PF01144 Coenzyme A transferase LFT47_08930 PF01144 Coenzyme A transferase LFT47_08935 PF02803 Thiolase, C-terminal domain LFT47_08935 PF00108 Thiolase, N-terminal domain LFT47_08945 PF00248 Aldo/keto reductase family LFT47_08955 PF00106 short chain dehydrogenase LFT47_08960 PF00999 Sodium/hydrogen exchanger family LFT47_08965 PF07690 Major Facilitator Superfamily LFT47_08970 PF01494 FAD binding domain LFT47_08985 PF07690 Major Facilitator Superfamily LFT47_08995 PF00248 Aldo/keto reductase family LFT47_09000 PF02548 Ketopantoate hydroxymethyltransferase LFT47_09005 PF02261 Aspartate decarboxylase LFT47_09010 PF00083 Sugar (and other) transporter LFT47_09010 PF08946 Osmosensory transporter coiled coil LFT47_09015 PF07702 UTRA domain LFT47_09015 PF00392 Bacterial regulatory proteins, gntR family LFT47_09020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_09020 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_09020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_09035 PF01144 Coenzyme A transferase LFT47_09040 PF01144 Coenzyme A transferase LFT47_09045 PF00501 AMP-binding enzyme LFT47_09045 PF13193 AMP-binding enzyme C-terminal domain LFT47_09065 PF01012 Electron transfer flavoprotein domain LFT47_09070 PF01012 Electron transfer flavoprotein domain LFT47_09070 PF00766 Electron transfer flavoprotein FAD-binding domain LFT47_09080 PF00392 Bacterial regulatory proteins, gntR family LFT47_09080 PF07729 FCD domain LFT47_09085 PF16123 Hydroxyacylglutathione hydrolase C-terminus LFT47_09085 PF00753 Metallo-beta-lactamase superfamily LFT47_09095 PF01613 Flavin reductase like domain LFT47_09105 PF00296 Luciferase-like monooxygenase LFT47_09110 PF00296 Luciferase-like monooxygenase LFT47_09115 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_09120 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_09120 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_09125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_09125 PF00005 ABC transporter LFT47_09130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_09130 PF00005 ABC transporter LFT47_09140 PF00107 Zinc-binding dehydrogenase LFT47_09140 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_09145 PF00171 Aldehyde dehydrogenase family LFT47_09160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_09175 PF01613 Flavin reductase like domain LFT47_09180 PF00392 Bacterial regulatory proteins, gntR family LFT47_09180 PF07729 FCD domain LFT47_09190 PF00296 Luciferase-like monooxygenase LFT47_09195 PF00296 Luciferase-like monooxygenase LFT47_09200 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_09205 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_09205 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_09210 PF00005 ABC transporter LFT47_09210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_09215 PF00005 ABC transporter LFT47_09215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_09225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LFT47_09225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LFT47_09225 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LFT47_09230 PF02233 NAD(P) transhydrogenase beta subunit LFT47_09240 PF01695 IstB-like ATP binding protein LFT47_09245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_09245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_09245 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_09250 PF03328 HpcH/HpaI aldolase/citrate lyase family LFT47_09260 PF00890 FAD binding domain LFT47_09260 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LFT47_09265 PF16363 GDP-mannose 4,6 dehydratase LFT47_09270 PF00378 Enoyl-CoA hydratase/isomerase LFT47_09295 PF00766 Electron transfer flavoprotein FAD-binding domain LFT47_09295 PF01012 Electron transfer flavoprotein domain LFT47_09300 PF01012 Electron transfer flavoprotein domain LFT47_09310 PF00378 Enoyl-CoA hydratase/isomerase LFT47_09315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFT47_09315 PF00378 Enoyl-CoA hydratase/isomerase LFT47_09315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFT47_09320 PF00106 short chain dehydrogenase LFT47_09325 PF00108 Thiolase, N-terminal domain LFT47_09325 PF02803 Thiolase, C-terminal domain LFT47_09335 PF01274 Malate synthase LFT47_09340 PF00463 Isocitrate lyase family LFT47_09345 PF02627 Carboxymuconolactone decarboxylase family LFT47_09350 PF00171 Aldehyde dehydrogenase family LFT47_09355 PF00120 Glutamine synthetase, catalytic domain LFT47_09360 PF00202 Aminotransferase class-III LFT47_09370 PF00067 Cytochrome P450 LFT47_09380 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_09380 PF14759 Reductase C-terminal LFT47_09385 PF00171 Aldehyde dehydrogenase family LFT47_09395 PF04715 Anthranilate synthase component I, N terminal region LFT47_09395 PF00425 chorismate binding enzyme LFT47_09395 PF00117 Glutamine amidotransferase class-I LFT47_09405 PF00356 Bacterial regulatory proteins, lacI family LFT47_09420 PF00999 Sodium/hydrogen exchanger family LFT47_09430 PF00248 Aldo/keto reductase family LFT47_09435 PF13823 Alcohol dehydrogenase GroES-associated LFT47_09435 PF00107 Zinc-binding dehydrogenase LFT47_09435 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_09440 PF07690 Major Facilitator Superfamily LFT47_09460 PF05973 Phage derived protein Gp49-like (DUF891) LFT47_09475 PF01614 Bacterial transcriptional regulator LFT47_09475 PF09339 IclR helix-turn-helix domain LFT47_09485 PF07691 PA14 domain LFT47_09485 PF14310 Fibronectin type III-like domain LFT47_09485 PF00933 Glycosyl hydrolase family 3 N terminal domain LFT47_09485 PF01915 Glycosyl hydrolase family 3 C-terminal domain LFT47_09490 PF07690 Major Facilitator Superfamily LFT47_09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_09495 PF13188 PAS domain LFT47_09495 PF13426 PAS domain LFT47_09500 PF01425 Amidase LFT47_09505 PF00072 Response regulator receiver domain LFT47_09505 PF00196 Bacterial regulatory proteins, luxR family LFT47_09510 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT47_09510 PF00175 Oxidoreductase NAD-binding domain LFT47_09520 PF00355 Rieske [2Fe-2S] domain LFT47_09520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LFT47_09595 PF02661 Fic/DOC family LFT47_09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_09605 PF03466 LysR substrate binding domain LFT47_09610 PF04303 PrpF protein LFT47_09615 PF00375 Sodium:dicarboxylate symporter family LFT47_09630 PF08946 Osmosensory transporter coiled coil LFT47_09630 PF00083 Sugar (and other) transporter LFT47_09640 PF01081 KDPG and KHG aldolase LFT47_09650 PF00356 Bacterial regulatory proteins, lacI family LFT47_09665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_09665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_09675 PF01638 HxlR-like helix-turn-helix LFT47_09695 PF16295 Tetracyclin repressor-like, C-terminal domain LFT47_09695 PF00440 Bacterial regulatory proteins, tetR family LFT47_09700 PF00561 alpha/beta hydrolase fold LFT47_09705 PF02801 Beta-ketoacyl synthase, C-terminal domain LFT47_09705 PF00109 Beta-ketoacyl synthase, N-terminal domain LFT47_09705 PF08659 KR domain LFT47_09705 PF16197 Ketoacyl-synthetase C-terminal extension LFT47_09705 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_09705 PF14765 Polyketide synthase dehydratase LFT47_09705 PF00550 Phosphopantetheine attachment site LFT47_09705 PF00698 Acyl transferase domain LFT47_09715 PF03746 LamB/YcsF family LFT47_09720 PF01425 Amidase LFT47_09725 PF02653 Branched-chain amino acid transport system / permease component LFT47_09730 PF00005 ABC transporter LFT47_09740 PF00392 Bacterial regulatory proteins, gntR family LFT47_09745 PF01593 Flavin containing amine oxidoreductase LFT47_09750 PF00795 Carbon-nitrogen hydrolase LFT47_09755 PF01546 Peptidase family M20/M25/M40 LFT47_09760 PF00324 Amino acid permease LFT47_09770 PF03737 Aldolase/RraA LFT47_09775 PF01042 Endoribonuclease L-PSP LFT47_09780 PF00083 Sugar (and other) transporter LFT47_09780 PF07690 Major Facilitator Superfamily LFT47_09790 PF07690 Major Facilitator Superfamily LFT47_09795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT47_09795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_09795 PF00205 Thiamine pyrophosphate enzyme, central domain LFT47_09800 PF00171 Aldehyde dehydrogenase family LFT47_09805 PF07969 Amidohydrolase family LFT47_09810 PF01546 Peptidase family M20/M25/M40 LFT47_09815 PF16154 Domain of unknown function (DUF4862) LFT47_09820 PF00294 pfkB family carbohydrate kinase LFT47_09830 PF07690 Major Facilitator Superfamily LFT47_09830 PF00083 Sugar (and other) transporter LFT47_09835 PF00107 Zinc-binding dehydrogenase LFT47_09835 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_09840 PF08125 Mannitol dehydrogenase C-terminal domain LFT47_09840 PF01232 Mannitol dehydrogenase Rossmann domain LFT47_09845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT47_09845 PF13378 Enolase C-terminal domain-like LFT47_09850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT47_09850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT47_09855 PF00356 Bacterial regulatory proteins, lacI family LFT47_09910 PF16656 Purple acid Phosphatase, N-terminal domain LFT47_09910 PF00149 Calcineurin-like phosphoesterase LFT47_09915 PF02661 Fic/DOC family LFT47_09920 PF04229 GrpB protein LFT47_09940 PF00251 Glycosyl hydrolases family 32 N-terminal domain LFT47_09940 PF08244 Glycosyl hydrolases family 32 C terminal LFT47_09945 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_09950 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_09960 PF00356 Bacterial regulatory proteins, lacI family LFT47_09980 PF00248 Aldo/keto reductase family LFT47_09995 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFT47_10005 PF00857 Isochorismatase family LFT47_10025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_10035 PF13180 PDZ domain LFT47_10040 PF00012 Hsp70 protein LFT47_10045 PF01025 GrpE LFT47_10050 PF00226 DnaJ domain LFT47_10050 PF01556 DnaJ C terminal domain LFT47_10060 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_10060 PF07724 AAA domain (Cdc48 subfamily) LFT47_10060 PF17871 AAA lid domain LFT47_10060 PF02861 Clp amino terminal domain, pathogenicity island component LFT47_10060 PF10431 C-terminal, D2-small domain, of ClpB protein LFT47_10065 PF00085 Thioredoxin LFT47_10070 PF00484 Carbonic anhydrase LFT47_10075 PF14842 FliG N-terminal domain LFT47_10075 PF14841 FliG middle domain LFT47_10075 PF01706 FliG C-terminal domain LFT47_10085 PF17153 Periplasmic sensor domain, extracellular LFT47_10085 PF00563 EAL domain LFT47_10095 PF00356 Bacterial regulatory proteins, lacI family LFT47_10100 PF00294 pfkB family carbohydrate kinase LFT47_10105 PF02502 Ribose/Galactose Isomerase LFT47_10110 PF00083 Sugar (and other) transporter LFT47_10110 PF07690 Major Facilitator Superfamily LFT47_10115 PF00248 Aldo/keto reductase family LFT47_10120 PF00248 Aldo/keto reductase family LFT47_10135 PF00069 Protein kinase domain LFT47_10150 PF02909 Tetracyclin repressor-like, C-terminal domain LFT47_10150 PF00440 Bacterial regulatory proteins, tetR family LFT47_10155 PF06305 Lipopolysaccharide assembly protein A domain LFT47_10160 PF03631 Virulence factor BrkB LFT47_10180 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_10180 PF00107 Zinc-binding dehydrogenase LFT47_10185 PF00196 Bacterial regulatory proteins, luxR family LFT47_10185 PF17874 MalT-like TPR region LFT47_10200 PF00226 DnaJ domain LFT47_10200 PF01556 DnaJ C terminal domain LFT47_10200 PF00684 DnaJ central domain LFT47_10205 PF00011 Hsp20/alpha crystallin family LFT47_10210 PF13411 MerR HTH family regulatory protein LFT47_10215 PF01381 Helix-turn-helix LFT47_10225 PF00248 Aldo/keto reductase family LFT47_10230 PF00248 Aldo/keto reductase family LFT47_10235 PF07690 Major Facilitator Superfamily LFT47_10250 PF01367 5'-3' exonuclease, C-terminal SAM fold LFT47_10250 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFT47_10260 PF00561 alpha/beta hydrolase fold LFT47_10265 PF01842 ACT domain LFT47_10265 PF01817 Chorismate mutase type II LFT47_10265 PF00800 Prephenate dehydratase LFT47_10280 PF02585 GlcNAc-PI de-N-acetylase LFT47_10290 PF02666 Phosphatidylserine decarboxylase LFT47_10360 PF00535 Glycosyl transferase family 2 LFT47_10365 PF01370 NAD dependent epimerase/dehydratase family LFT47_10370 PF01048 Phosphorylase superfamily LFT47_10380 PF00175 Oxidoreductase NAD-binding domain LFT47_10380 PF00970 Oxidoreductase FAD-binding domain LFT47_10380 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT47_10385 PF00174 Oxidoreductase molybdopterin binding domain LFT47_10390 PF00817 impB/mucB/samB family LFT47_10390 PF11799 impB/mucB/samB family C-terminal domain LFT47_10415 PF00085 Thioredoxin LFT47_10420 PF13411 MerR HTH family regulatory protein LFT47_10430 PF00472 RF-1 domain LFT47_10430 PF03462 PCRF domain LFT47_10445 PF01370 NAD dependent epimerase/dehydratase family LFT47_10450 PF00248 Aldo/keto reductase family LFT47_10460 PF00912 Transglycosylase LFT47_10470 PF00128 Alpha amylase, catalytic domain LFT47_10470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFT47_10475 PF04226 Transglycosylase associated protein LFT47_10490 PF00005 ABC transporter LFT47_10500 PF07724 AAA domain (Cdc48 subfamily) LFT47_10500 PF07728 AAA domain (dynein-related subfamily) LFT47_10500 PF10431 C-terminal, D2-small domain, of ClpB protein LFT47_10510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LFT47_10510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LFT47_10515 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT47_10515 PF01799 [2Fe-2S] binding domain LFT47_10520 PF03450 CO dehydrogenase flavoprotein C-terminal domain LFT47_10520 PF00941 FAD binding domain in molybdopterin dehydrogenase LFT47_10525 PF03795 YCII-related domain LFT47_10530 PF04542 Sigma-70 region 2 LFT47_10530 PF08281 Sigma-70, region 4 LFT47_10545 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LFT47_10545 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LFT47_10550 PF00753 Metallo-beta-lactamase superfamily LFT47_10550 PF16123 Hydroxyacylglutathione hydrolase C-terminus LFT47_10555 PF07859 alpha/beta hydrolase fold LFT47_10560 PF01494 FAD binding domain LFT47_10575 PF07690 Major Facilitator Superfamily LFT47_10580 PF00067 Cytochrome P450 LFT47_10590 PF14759 Reductase C-terminal LFT47_10590 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_10595 PF00440 Bacterial regulatory proteins, tetR family LFT47_10605 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFT47_10615 PF01594 AI-2E family transporter LFT47_10620 PF04185 Phosphoesterase family LFT47_10625 PF00300 Histidine phosphatase superfamily (branch 1) LFT47_10630 PF09992 Phosphodiester glycosidase LFT47_10630 PF12708 Pectate lyase superfamily protein LFT47_10635 PF01544 CorA-like Mg2+ transporter protein LFT47_10645 PF00501 AMP-binding enzyme LFT47_10645 PF13193 AMP-binding enzyme C-terminal domain LFT47_10665 PF02861 Clp amino terminal domain, pathogenicity island component LFT47_10665 PF17871 AAA lid domain LFT47_10665 PF07724 AAA domain (Cdc48 subfamily) LFT47_10665 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_10665 PF10431 C-terminal, D2-small domain, of ClpB protein LFT47_10670 PF05368 NmrA-like family LFT47_10675 PF03364 Polyketide cyclase / dehydrase and lipid transport LFT47_10680 PF00005 ABC transporter LFT47_10685 PF13407 Periplasmic binding protein domain LFT47_10695 PF00723 Glycosyl hydrolases family 15 LFT47_10700 PF00107 Zinc-binding dehydrogenase LFT47_10700 PF13823 Alcohol dehydrogenase GroES-associated LFT47_10700 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_10705 PF00356 Bacterial regulatory proteins, lacI family LFT47_10710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT47_10710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT47_10715 PF00596 Class II Aldolase and Adducin N-terminal domain LFT47_10720 PF11762 L-arabinose isomerase C-terminal domain LFT47_10720 PF02610 L-arabinose isomerase LFT47_10735 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LFT47_10740 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_10745 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_10755 PF00356 Bacterial regulatory proteins, lacI family LFT47_10780 PF00171 Aldehyde dehydrogenase family LFT47_10795 PF01179 Copper amine oxidase, enzyme domain LFT47_10795 PF02728 Copper amine oxidase, N3 domain LFT47_10800 PF13977 BetI-type transcriptional repressor, C-terminal LFT47_10800 PF00440 Bacterial regulatory proteins, tetR family LFT47_10805 PF00356 Bacterial regulatory proteins, lacI family LFT47_10810 PF01261 Xylose isomerase-like TIM barrel LFT47_10815 PF00596 Class II Aldolase and Adducin N-terminal domain LFT47_10820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT47_10820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT47_10830 PF07690 Major Facilitator Superfamily LFT47_10835 PF00011 Hsp20/alpha crystallin family LFT47_10870 PF00037 4Fe-4S binding domain LFT47_10875 PF00171 Aldehyde dehydrogenase family LFT47_10885 PF00701 Dihydrodipicolinate synthetase family LFT47_10890 PF00378 Enoyl-CoA hydratase/isomerase LFT47_10895 PF02515 CoA-transferase family III LFT47_10905 PF01381 Helix-turn-helix LFT47_10905 PF07883 Cupin domain LFT47_10910 PF00083 Sugar (and other) transporter LFT47_10920 PF07411 Domain of unknown function (DUF1508) LFT47_10935 PF00069 Protein kinase domain LFT47_10960 PF00456 Transketolase, thiamine diphosphate binding domain LFT47_10970 PF03364 Polyketide cyclase / dehydrase and lipid transport LFT47_11035 PF00082 Subtilase family LFT47_11035 PF09286 Pro-kumamolisin, activation domain LFT47_11045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFT47_11045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT47_11045 PF03129 Anticodon binding domain LFT47_11050 PF01230 HIT domain LFT47_11055 PF01066 CDP-alcohol phosphatidyltransferase LFT47_11065 PF01680 SOR/SNZ family LFT47_11070 PF01432 Peptidase family M3 LFT47_11075 PF07685 CobB/CobQ-like glutamine amidotransferase domain LFT47_11080 PF08353 Domain of unknown function (DUF1727) LFT47_11080 PF08245 Mur ligase middle domain LFT47_11085 PF01174 SNO glutamine amidotransferase family LFT47_11090 PF01709 Transcriptional regulator LFT47_11095 PF02075 Crossover junction endodeoxyribonuclease RuvC LFT47_11100 PF07499 RuvA, C-terminal domain LFT47_11100 PF01330 RuvA N terminal domain LFT47_11105 PF05496 Holliday junction DNA helicase RuvB P-loop domain LFT47_11105 PF05491 RuvB C-terminal winged helix domain LFT47_11105 PF17864 RuvB AAA lid domain LFT47_11115 PF02355 Protein export membrane protein LFT47_11115 PF07549 SecD/SecF GG Motif LFT47_11120 PF07549 SecD/SecF GG Motif LFT47_11120 PF02355 Protein export membrane protein LFT47_11125 PF02824 TGS domain LFT47_11125 PF04607 Region found in RelA / SpoT proteins LFT47_11125 PF13291 ACT domain LFT47_11135 PF03993 Domain of Unknown Function (DUF349) LFT47_11140 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFT47_11145 PF03129 Anticodon binding domain LFT47_11145 PF13393 Histidyl-tRNA synthetase LFT47_11150 PF02938 GAD domain LFT47_11150 PF00152 tRNA synthetases class II (D, K and N) LFT47_11150 PF01336 OB-fold nucleic acid binding domain LFT47_11170 PF12002 MgsA AAA+ ATPase C terminal LFT47_11170 PF16193 AAA C-terminal domain LFT47_11170 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_11175 PF01479 S4 domain LFT47_11175 PF00163 Ribosomal protein S4/S9 N-terminal domain LFT47_11190 PF01411 tRNA synthetases class II (A) LFT47_11190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFT47_11190 PF02272 DHHA1 domain LFT47_11195 PF03652 Holliday junction resolvase LFT47_11205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LFT47_11205 PF01488 Shikimate / quinate 5-dehydrogenase LFT47_11205 PF08501 Shikimate dehydrogenase substrate binding domain LFT47_11210 PF01264 Chorismate synthase LFT47_11215 PF01202 Shikimate kinase LFT47_11220 PF01761 3-dehydroquinate synthase LFT47_11230 PF08207 Elongation factor P (EF-P) KOW-like domain LFT47_11230 PF09285 Elongation factor P, C-terminal LFT47_11230 PF01132 Elongation factor P (EF-P) OB domain LFT47_11235 PF01029 NusB family LFT47_11240 PF00156 Phosphoribosyl transferase domain LFT47_11245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFT47_11245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFT47_11250 PF01979 Amidohydrolase family LFT47_11260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LFT47_11260 PF00117 Glutamine amidotransferase class-I LFT47_11265 PF02142 MGS-like domain LFT47_11265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFT47_11265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LFT47_11270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFT47_11280 PF00625 Guanylate kinase LFT47_11285 PF01192 RNA polymerase Rpb6 LFT47_11290 PF04127 DNA / pantothenate metabolism flavoprotein LFT47_11290 PF02441 Flavoprotein LFT47_11295 PF02773 S-adenosylmethionine synthetase, C-terminal domain LFT47_11295 PF02772 S-adenosylmethionine synthetase, central domain LFT47_11295 PF00438 S-adenosylmethionine synthetase, N-terminal domain LFT47_11300 PF17764 3′ DNA-binding domain (3′BD) LFT47_11305 PF13439 Glycosyltransferase Family 4 LFT47_11310 PF00561 alpha/beta hydrolase fold LFT47_11315 PF00248 Aldo/keto reductase family LFT47_11320 PF04198 Putative sugar-binding domain LFT47_11325 PF01266 FAD dependent oxidoreductase LFT47_11325 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LFT47_11330 PF00230 Major intrinsic protein LFT47_11335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT47_11335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT47_11340 PF13603 Leucyl-tRNA synthetase, Domain 2 LFT47_11340 PF08264 Anticodon-binding domain of tRNA LFT47_11340 PF00133 tRNA synthetases class I (I, L, M and V) LFT47_11340 PF09334 tRNA synthetases class I (M) LFT47_11345 PF02645 Uncharacterised protein, DegV family COG1307 LFT47_11350 PF02720 Domain of unknown function (DUF222) LFT47_11410 PF01042 Endoribonuclease L-PSP LFT47_11435 PF08281 Sigma-70, region 4 LFT47_11435 PF04542 Sigma-70 region 2 LFT47_11440 PF03717 Penicillin-binding Protein dimerisation domain LFT47_11440 PF00905 Penicillin binding protein transpeptidase domain LFT47_11450 PF12728 Helix-turn-helix domain LFT47_11500 PF01119 DNA mismatch repair protein, C-terminal domain LFT47_11500 PF08676 MutL C terminal dimerisation domain LFT47_11540 PF01649 Ribosomal protein S20 LFT47_11550 PF00679 Elongation factor G C-terminus LFT47_11550 PF00009 Elongation factor Tu GTP binding domain LFT47_11550 PF06421 GTP-binding protein LepA C-terminus LFT47_11555 PF04055 Radical SAM superfamily LFT47_11555 PF06969 HemN C-terminal domain LFT47_11570 PF08220 DeoR-like helix-turn-helix domain LFT47_11570 PF01628 HrcA protein C terminal domain LFT47_11575 PF00226 DnaJ domain LFT47_11575 PF00684 DnaJ central domain LFT47_11575 PF01556 DnaJ C terminal domain LFT47_11580 PF04452 RNA methyltransferase LFT47_11590 PF02562 PhoH-like protein LFT47_11595 PF02130 Uncharacterized protein family UPF0054 LFT47_11600 PF00571 CBS domain LFT47_11600 PF03471 Transporter associated domain LFT47_11600 PF01595 Cyclin M transmembrane N-terminal domain LFT47_11605 PF07650 KH domain LFT47_11605 PF01926 50S ribosome-binding GTPase LFT47_11610 PF03816 Cell envelope-related transcriptional attenuator domain LFT47_11610 PF13399 LytR cell envelope-related transcriptional attenuator LFT47_11615 PF01431 Peptidase family M13 LFT47_11615 PF05649 Peptidase family M13 LFT47_11620 PF08502 LeuA allosteric (dimerisation) domain LFT47_11620 PF00682 HMGL-like LFT47_11625 PF11967 Recombination protein O N terminal LFT47_11625 PF02565 Recombination protein O C terminal LFT47_11630 PF01255 Putative undecaprenyl diphosphate synthase LFT47_11635 PF12146 Serine aminopeptidase, S33 LFT47_11645 PF00890 FAD binding domain LFT47_11650 PF01180 Dihydroorotate dehydrogenase LFT47_11655 PF11241 Protein of unknown function (DUF3043) LFT47_11660 PF01546 Peptidase family M20/M25/M40 LFT47_11660 PF07687 Peptidase dimerisation domain LFT47_11665 PF01521 Iron-sulphur cluster biosynthesis LFT47_11670 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LFT47_11675 PF00115 Cytochrome C and Quinol oxidase polypeptide I LFT47_11680 PF12270 Cytochrome c oxidase subunit IV LFT47_11685 PF00381 PTS HPr component phosphorylation site LFT47_11690 PF00392 Bacterial regulatory proteins, gntR family LFT47_11690 PF07702 UTRA domain LFT47_11695 PF13631 Cytochrome b(N-terminal)/b6/petB LFT47_11700 PF00355 Rieske [2Fe-2S] domain LFT47_11705 PF00034 Cytochrome c LFT47_11705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LFT47_11710 PF00510 Cytochrome c oxidase subunit III LFT47_11715 PF00591 Glycosyl transferase family, a/b domain LFT47_11715 PF02885 Glycosyl transferase family, helical bundle domain LFT47_11740 PF03816 Cell envelope-related transcriptional attenuator domain LFT47_11740 PF13399 LytR cell envelope-related transcriptional attenuator LFT47_11745 PF01810 LysE type translocator LFT47_11755 PF00196 Bacterial regulatory proteins, luxR family LFT47_11755 PF00072 Response regulator receiver domain LFT47_11770 PF00005 ABC transporter LFT47_11770 PF13732 Domain of unknown function (DUF4162) LFT47_11775 PF12697 Alpha/beta hydrolase family LFT47_11780 PF00196 Bacterial regulatory proteins, luxR family LFT47_11790 PF00857 Isochorismatase family LFT47_11800 PF02567 Phenazine biosynthesis-like protein LFT47_11810 PF02899 Phage integrase, N-terminal SAM-like domain LFT47_11810 PF00589 Phage integrase family LFT47_11855 PF02797 Chalcone and stilbene synthases, C-terminal domain LFT47_11855 PF00195 Chalcone and stilbene synthases, N-terminal domain LFT47_11865 PF01494 FAD binding domain LFT47_11870 PF01327 Polypeptide deformylase LFT47_11875 PF07676 WD40-like Beta Propeller Repeat LFT47_11875 PF00326 Prolyl oligopeptidase family LFT47_11890 PF01145 SPFH domain / Band 7 family LFT47_11895 PF13397 RNA polymerase-binding protein LFT47_11900 PF00535 Glycosyl transferase family 2 LFT47_11905 PF07969 Amidohydrolase family LFT47_11910 PF08148 DSHCT (NUC185) domain LFT47_11910 PF00271 Helicase conserved C-terminal domain LFT47_11910 PF00270 DEAD/DEAH box helicase LFT47_11915 PF00902 Sec-independent protein translocase protein (TatC) LFT47_11920 PF02416 mttA/Hcf106 family LFT47_11930 PF13280 WYL domain LFT47_11935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFT47_11940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFT47_11945 PF03136 Pup-ligase protein LFT47_11950 PF00227 Proteasome subunit LFT47_11955 PF00227 Proteasome subunit LFT47_11960 PF05639 Pup-like protein LFT47_11965 PF03136 Pup-ligase protein LFT47_11970 PF16450 Proteasomal ATPase OB C-terminal domain LFT47_11970 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_11970 PF17758 Proteasomal ATPase OB N-terminal domain LFT47_11975 PF08704 tRNA methyltransferase complex GCD14 subunit LFT47_11980 PF02163 Peptidase family M50 LFT47_11980 PF00571 CBS domain LFT47_11985 PF13419 Haloacid dehalogenase-like hydrolase LFT47_11995 PF01406 tRNA synthetases class I (C) catalytic domain LFT47_12000 PF02673 Bacitracin resistance protein BacA LFT47_12005 PF00248 Aldo/keto reductase family LFT47_12025 PF07687 Peptidase dimerisation domain LFT47_12025 PF01546 Peptidase family M20/M25/M40 LFT47_12035 PF01575 MaoC like domain LFT47_12045 PF00108 Thiolase, N-terminal domain LFT47_12045 PF02803 Thiolase, C-terminal domain LFT47_12060 PF13439 Glycosyltransferase Family 4 LFT47_12060 PF00534 Glycosyl transferases group 1 LFT47_12065 PF00483 Nucleotidyl transferase LFT47_12070 PF00106 short chain dehydrogenase LFT47_12075 PF01841 Transglutaminase-like superfamily LFT47_12075 PF08379 Bacterial transglutaminase-like N-terminal region LFT47_12085 PF04174 A circularly permuted ATPgrasp LFT47_12090 PF03601 Conserved hypothetical protein 698 LFT47_12095 PF01433 Peptidase family M1 domain LFT47_12095 PF11838 ERAP1-like C-terminal domain LFT47_12110 PF03099 Biotin/lipoate A/B protein ligase family LFT47_12110 PF10437 Bacterial lipoate protein ligase C-terminus LFT47_12115 PF01197 Ribosomal protein L31 LFT47_12120 PF00588 SpoU rRNA Methylase family LFT47_12130 PF00005 ABC transporter LFT47_12165 PF04073 Aminoacyl-tRNA editing domain LFT47_12165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT47_12165 PF03129 Anticodon binding domain LFT47_12175 PF12848 ABC transporter LFT47_12175 PF16326 ABC transporter C-terminal domain LFT47_12175 PF00005 ABC transporter LFT47_12185 PF02632 BioY family LFT47_12190 PF00005 ABC transporter LFT47_12200 PF02803 Thiolase, C-terminal domain LFT47_12200 PF00108 Thiolase, N-terminal domain LFT47_12205 PF00501 AMP-binding enzyme LFT47_12205 PF13193 AMP-binding enzyme C-terminal domain LFT47_12210 PF01883 Iron-sulfur cluster assembly protein LFT47_12215 PF00005 ABC transporter LFT47_12225 PF01458 Uncharacterized protein family (UPF0051) LFT47_12230 PF01458 Uncharacterized protein family (UPF0051) LFT47_12240 PF00005 ABC transporter LFT47_12250 PF02628 Cytochrome oxidase assembly protein LFT47_12255 PF01040 UbiA prenyltransferase family LFT47_12260 PF00456 Transketolase, thiamine diphosphate binding domain LFT47_12260 PF02780 Transketolase, C-terminal domain LFT47_12260 PF02779 Transketolase, pyrimidine binding domain LFT47_12265 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFT47_12270 PF00342 Phosphoglucose isomerase LFT47_12275 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFT47_12275 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFT47_12285 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFT47_12295 PF03840 Preprotein translocase SecG subunit LFT47_12300 PF00121 Triosephosphate isomerase LFT47_12305 PF00162 Phosphoglycerate kinase LFT47_12310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFT47_12310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFT47_12315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LFT47_12315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LFT47_12320 PF10298 WhiA N-terminal LAGLIDADG-like domain LFT47_12320 PF02650 WhiA C-terminal HTH domain LFT47_12320 PF14527 WhiA LAGLIDADG-like domain LFT47_12325 PF01933 Uncharacterised protein family UPF0052 LFT47_12330 PF03668 P-loop ATPase protein family LFT47_12335 PF02151 UvrB/uvrC motif LFT47_12335 PF12826 Helix-hairpin-helix motif LFT47_12335 PF08459 UvrC Helix-hairpin-helix N-terminal LFT47_12335 PF01541 GIY-YIG catalytic domain LFT47_12340 PF01553 Acyltransferase LFT47_12340 PF00501 AMP-binding enzyme LFT47_12345 PF13419 Haloacid dehalogenase-like hydrolase LFT47_12350 PF17760 UvrA interaction domain LFT47_12350 PF00005 ABC transporter LFT47_12350 PF17755 UvrA DNA-binding domain LFT47_12360 PF00664 ABC transporter transmembrane region LFT47_12360 PF00005 ABC transporter LFT47_12365 PF00005 ABC transporter LFT47_12365 PF00664 ABC transporter transmembrane region LFT47_12385 PF00561 alpha/beta hydrolase fold LFT47_12390 PF07690 Major Facilitator Superfamily LFT47_12390 PF00083 Sugar (and other) transporter LFT47_12395 PF03741 Integral membrane protein TerC family LFT47_12400 PF00271 Helicase conserved C-terminal domain LFT47_12400 PF04851 Type III restriction enzyme, res subunit LFT47_12400 PF02151 UvrB/uvrC motif LFT47_12400 PF12344 Ultra-violet resistance protein B LFT47_12400 PF17757 UvrB interaction domain LFT47_12410 PF04229 GrpB protein LFT47_12410 PF01121 Dephospho-CoA kinase LFT47_12415 PF09186 Domain of unknown function (DUF1949) LFT47_12415 PF01205 Uncharacterized protein family UPF0029 LFT47_12420 PF00575 S1 RNA binding domain LFT47_12430 PF17668 Acetyltransferase (GNAT) domain LFT47_12430 PF13530 Sterol carrier protein domain LFT47_12435 PF01367 5'-3' exonuclease, C-terminal SAM fold LFT47_12435 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFT47_12435 PF00476 DNA polymerase family A LFT47_12440 PF03061 Thioesterase superfamily LFT47_12445 PF01872 RibD C-terminal domain LFT47_12455 PF01384 Phosphate transporter family LFT47_12465 PF03301 Tryptophan 2,3-dioxygenase LFT47_12470 PF00266 Aminotransferase class-V LFT47_12480 PF05922 Peptidase inhibitor I9 LFT47_12480 PF00082 Subtilase family LFT47_12490 PF00005 ABC transporter LFT47_12500 PF01300 Telomere recombination LFT47_12510 PF00009 Elongation factor Tu GTP binding domain LFT47_12510 PF03764 Elongation factor G, domain IV LFT47_12510 PF14492 Elongation Factor G, domain II LFT47_12510 PF00679 Elongation factor G C-terminus LFT47_12510 PF03144 Elongation factor Tu domain 2 LFT47_12520 PF00271 Helicase conserved C-terminal domain LFT47_12520 PF08482 ATP-dependent helicase C-terminal LFT47_12520 PF00270 DEAD/DEAH box helicase LFT47_12520 PF04408 Helicase associated domain (HA2) LFT47_12555 PF00107 Zinc-binding dehydrogenase LFT47_12555 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_12560 PF00083 Sugar (and other) transporter LFT47_12560 PF07690 Major Facilitator Superfamily LFT47_12565 PF00356 Bacterial regulatory proteins, lacI family LFT47_12570 PF01156 Inosine-uridine preferring nucleoside hydrolase LFT47_12575 PF06736 Protein of unknown function (DUF1211) LFT47_12585 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_12590 PF01566 Natural resistance-associated macrophage protein LFT47_12590 PF03358 NADPH-dependent FMN reductase LFT47_12595 PF13520 Amino acid permease LFT47_12600 PF07690 Major Facilitator Superfamily LFT47_12610 PF00462 Glutaredoxin LFT47_12615 PF00384 Molybdopterin oxidoreductase LFT47_12615 PF01568 Molydopterin dinucleotide binding domain LFT47_12635 PF08940 Domain of unknown function (DUF1918) LFT47_12640 PF06250 YhcG PDDEXK nuclease domain LFT47_12640 PF17761 DUF1016 N-terminal domain LFT47_12655 PF01738 Dienelactone hydrolase family LFT47_12660 PF00753 Metallo-beta-lactamase superfamily LFT47_12660 PF12706 Beta-lactamase superfamily domain LFT47_12665 PF00512 His Kinase A (phospho-acceptor) domain LFT47_12665 PF00672 HAMP domain LFT47_12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_12665 PF01627 Hpt domain LFT47_12665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LFT47_12665 PF00072 Response regulator receiver domain LFT47_12675 PF00873 AcrB/AcrD/AcrF family LFT47_12685 PF00873 AcrB/AcrD/AcrF family LFT47_12705 PF00248 Aldo/keto reductase family LFT47_12710 PF01055 Glycosyl hydrolases family 31 LFT47_12710 PF13802 Galactose mutarotase-like LFT47_12715 PF00723 Glycosyl hydrolases family 15 LFT47_12725 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_12730 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_12735 PF00480 ROK family LFT47_12740 PF00268 Ribonucleotide reductase, small chain LFT47_12745 PF08343 Ribonucleotide reductase N-terminal LFT47_12745 PF02867 Ribonucleotide reductase, barrel domain LFT47_12745 PF00317 Ribonucleotide reductase, all-alpha domain LFT47_12750 PF07972 NrdI Flavodoxin like LFT47_12760 PF03466 LysR substrate binding domain LFT47_12760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_12770 PF08267 Cobalamin-independent synthase, N-terminal domain LFT47_12770 PF01717 Cobalamin-independent synthase, Catalytic domain LFT47_12775 PF02219 Methylenetetrahydrofolate reductase LFT47_12785 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_12790 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_12795 PF13416 Bacterial extracellular solute-binding protein LFT47_12800 PF00480 ROK family LFT47_12805 PF01636 Phosphotransferase enzyme family LFT47_12810 PF05175 Methyltransferase small domain LFT47_12825 PF16363 GDP-mannose 4,6 dehydratase LFT47_12830 PF00440 Bacterial regulatory proteins, tetR family LFT47_12835 PF03756 A-factor biosynthesis hotdog domain LFT47_12840 PF17932 Tetracyclin repressor-like, C-terminal domain LFT47_12840 PF00440 Bacterial regulatory proteins, tetR family LFT47_12845 PF00106 short chain dehydrogenase LFT47_12850 PF07729 FCD domain LFT47_12850 PF00392 Bacterial regulatory proteins, gntR family LFT47_12855 PF07690 Major Facilitator Superfamily LFT47_12860 PF01156 Inosine-uridine preferring nucleoside hydrolase LFT47_12870 PF00294 pfkB family carbohydrate kinase LFT47_12880 PF04371 Porphyromonas-type peptidyl-arginine deiminase LFT47_12885 PF01425 Amidase LFT47_12890 PF02416 mttA/Hcf106 family LFT47_12910 PF00005 ABC transporter LFT47_12910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_12915 PF00005 ABC transporter LFT47_12915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_12920 PF07690 Major Facilitator Superfamily LFT47_12930 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_12950 PF02811 PHP domain LFT47_12950 PF14579 Helix-hairpin-helix motif LFT47_12950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LFT47_12950 PF07733 Bacterial DNA polymerase III alpha NTPase domain LFT47_12960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_12960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_12970 PF00343 Carbohydrate phosphorylase LFT47_12970 PF11897 Protein of unknown function (DUF3417) LFT47_12975 PF00356 Bacterial regulatory proteins, lacI family LFT47_12980 PF00005 ABC transporter LFT47_12980 PF08402 TOBE domain LFT47_13025 PF01467 Cytidylyltransferase-like LFT47_13035 PF00171 Aldehyde dehydrogenase family LFT47_13040 PF01472 PUA domain LFT47_13040 PF00696 Amino acid kinase family LFT47_13045 PF01926 50S ribosome-binding GTPase LFT47_13045 PF01018 GTP1/OBG LFT47_13045 PF09269 Domain of unknown function (DUF1967) LFT47_13050 PF01016 Ribosomal L27 protein LFT47_13055 PF00829 Ribosomal prokaryotic L21 protein LFT47_13060 PF08543 Phosphomethylpyrimidine kinase LFT47_13060 PF03070 TENA/THI-4/PQQC family LFT47_13060 PF02581 Thiamine monophosphate synthase LFT47_13065 PF10150 Ribonuclease E/G family LFT47_13075 PF00334 Nucleoside diphosphate kinase LFT47_13085 PF02875 Mur ligase family, glutamate ligase domain LFT47_13085 PF08245 Mur ligase middle domain LFT47_13090 PF08264 Anticodon-binding domain of tRNA LFT47_13090 PF00133 tRNA synthetases class I (I, L, M and V) LFT47_13095 PF00106 short chain dehydrogenase LFT47_13105 PF08264 Anticodon-binding domain of tRNA LFT47_13105 PF00133 tRNA synthetases class I (I, L, M and V) LFT47_13110 PF06827 Zinc finger found in FPG and IleRS LFT47_13110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT47_13115 PF01323 DSBA-like thioredoxin domain LFT47_13120 PF06689 ClpX C4-type zinc finger LFT47_13120 PF10431 C-terminal, D2-small domain, of ClpB protein LFT47_13120 PF07724 AAA domain (Cdc48 subfamily) LFT47_13125 PF00574 Clp protease LFT47_13130 PF00574 Clp protease LFT47_13135 PF05698 Bacterial trigger factor protein (TF) C-terminus LFT47_13135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFT47_13135 PF05697 Bacterial trigger factor protein (TF) LFT47_13150 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFT47_13150 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT47_13150 PF06827 Zinc finger found in FPG and IleRS LFT47_13155 PF02502 Ribose/Galactose Isomerase LFT47_13165 PF11838 ERAP1-like C-terminal domain LFT47_13165 PF01433 Peptidase family M1 domain LFT47_13175 PF00924 Mechanosensitive ion channel LFT47_13180 PF01152 Bacterial-like globin LFT47_13195 PF00005 ABC transporter LFT47_13195 PF12848 ABC transporter LFT47_13220 PF00557 Metallopeptidase family M24 LFT47_13250 PF00929 Exonuclease LFT47_13260 PF01327 Polypeptide deformylase LFT47_13280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFT47_13280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFT47_13290 PF03883 Peroxide stress protein YaaA LFT47_13295 PF02591 C4-type zinc ribbon domain LFT47_13300 PF01784 NIF3 (NGG1p interacting factor 3) LFT47_13305 PF01625 Peptide methionine sulfoxide reductase LFT47_13310 PF00291 Pyridoxal-phosphate dependent enzyme LFT47_13315 PF00132 Bacterial transferase hexapeptide (six repeats) LFT47_13315 PF06426 Serine acetyltransferase, N-terminal LFT47_13320 PF00106 short chain dehydrogenase LFT47_13325 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LFT47_13325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT47_13330 PF07729 FCD domain LFT47_13330 PF00392 Bacterial regulatory proteins, gntR family LFT47_13335 PF00107 Zinc-binding dehydrogenase LFT47_13335 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_13345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT47_13345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT47_13350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT47_13355 PF07690 Major Facilitator Superfamily LFT47_13355 PF00083 Sugar (and other) transporter LFT47_13360 PF09339 IclR helix-turn-helix domain LFT47_13360 PF01614 Bacterial transcriptional regulator LFT47_13370 PF00392 Bacterial regulatory proteins, gntR family LFT47_13370 PF07702 UTRA domain LFT47_13390 PF00005 ABC transporter LFT47_13390 PF08402 TOBE domain LFT47_13395 PF13419 Haloacid dehalogenase-like hydrolase LFT47_13410 PF02146 Sir2 family LFT47_13415 PF00578 AhpC/TSA family LFT47_13420 PF11253 Protein of unknown function (DUF3052) LFT47_13425 PF17831 Pyruvate dehydrogenase E1 component middle domain LFT47_13425 PF00456 Transketolase, thiamine diphosphate binding domain LFT47_13430 PF17853 GGDEF-like domain LFT47_13430 PF13556 PucR C-terminal helix-turn-helix domain LFT47_13435 PF00698 Acyl transferase domain LFT47_13440 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFT47_13440 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFT47_13445 PF00550 Phosphopantetheine attachment site LFT47_13450 PF02801 Beta-ketoacyl synthase, C-terminal domain LFT47_13450 PF00109 Beta-ketoacyl synthase, N-terminal domain LFT47_13460 PF02899 Phage integrase, N-terminal SAM-like domain LFT47_13460 PF00589 Phage integrase family LFT47_13470 PF13335 Magnesium chelatase, subunit ChlI C-terminal LFT47_13470 PF01078 Magnesium chelatase, subunit ChlI LFT47_13475 PF02021 Uncharacterised protein family UPF0102 LFT47_13480 PF10611 Protein of unknown function (DUF2469) LFT47_13485 PF01351 Ribonuclease HII LFT47_13490 PF10502 Signal peptidase, peptidase S26 LFT47_13495 PF10502 Signal peptidase, peptidase S26 LFT47_13500 PF01245 Ribosomal protein L19 LFT47_13505 PF01746 tRNA (Guanine-1)-methyltransferase LFT47_13510 PF05239 PRC-barrel domain LFT47_13510 PF01782 RimM N-terminal domain LFT47_13520 PF00886 Ribosomal protein S16 LFT47_13530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT47_13535 PF01979 Amidohydrolase family LFT47_13540 PF01964 Radical SAM ThiC family LFT47_13540 PF13667 ThiC-associated domain LFT47_13550 PF02978 Signal peptide binding domain LFT47_13550 PF02881 SRP54-type protein, helical bundle domain LFT47_13550 PF00448 SRP54-type protein, GTPase domain LFT47_13555 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFT47_13555 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFT47_13560 PF00543 Nitrogen regulatory protein P-II LFT47_13565 PF00909 Ammonium Transporter Family LFT47_13570 PF07690 Major Facilitator Superfamily LFT47_13575 PF00448 SRP54-type protein, GTPase domain LFT47_13575 PF02881 SRP54-type protein, helical bundle domain LFT47_13580 PF06470 SMC proteins Flexible Hinge Domain LFT47_13580 PF02463 RecF/RecN/SMC N terminal domain LFT47_13585 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFT47_13585 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFT47_13585 PF06827 Zinc finger found in FPG and IleRS LFT47_13590 PF14622 Ribonuclease-III-like LFT47_13590 PF00035 Double-stranded RNA binding motif LFT47_13595 PF01783 Ribosomal L32p protein family LFT47_13600 PF02620 Large ribosomal RNA subunit accumulation protein YceD LFT47_13605 PF01467 Cytidylyltransferase-like LFT47_13610 PF00155 Aminotransferase class I and II LFT47_13625 PF00271 Helicase conserved C-terminal domain LFT47_13625 PF17191 RecG wedge domain LFT47_13625 PF00270 DEAD/DEAH box helicase LFT47_13630 PF13684 Dihydroxyacetone kinase family LFT47_13630 PF02734 DAK2 domain LFT47_13635 PF00586 AIR synthase related protein, N-terminal domain LFT47_13635 PF02769 AIR synthase related protein, C-terminal domain LFT47_13645 PF01820 D-ala D-ala ligase N-terminus LFT47_13645 PF07478 D-ala D-ala ligase C-terminus LFT47_13650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LFT47_13650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LFT47_13660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFT47_13665 PF00694 Aconitase C-terminal domain LFT47_13670 PF00330 Aconitase family (aconitate hydratase) LFT47_13675 PF01614 Bacterial transcriptional regulator LFT47_13675 PF09339 IclR helix-turn-helix domain LFT47_13705 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFT47_13710 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT47_13715 PF00753 Metallo-beta-lactamase superfamily LFT47_13715 PF16123 Hydroxyacylglutathione hydrolase C-terminus LFT47_13725 PF01063 Amino-transferase class IV LFT47_13730 PF00180 Isocitrate/isopropylmalate dehydrogenase LFT47_13750 PF09334 tRNA synthetases class I (M) LFT47_13755 PF00005 ABC transporter LFT47_13755 PF02687 FtsX-like permease family LFT47_13755 PF12704 MacB-like periplasmic core domain LFT47_13765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT47_13765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT47_13765 PF01842 ACT domain LFT47_13770 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LFT47_13770 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LFT47_13775 PF10369 Small subunit of acetolactate synthase LFT47_13780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT47_13780 PF00205 Thiamine pyrophosphate enzyme, central domain LFT47_13780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_13785 PF00920 Dehydratase family LFT47_13795 PF07995 Glucose / Sorbosone dehydrogenase LFT47_13815 PF00578 AhpC/TSA family LFT47_13825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_13830 PF06039 Malate:quinone oxidoreductase (Mqo) LFT47_13835 PF00873 AcrB/AcrD/AcrF family LFT47_13840 PF00296 Luciferase-like monooxygenase LFT47_13850 PF08379 Bacterial transglutaminase-like N-terminal region LFT47_13850 PF01841 Transglutaminase-like superfamily LFT47_13865 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT47_13875 PF00266 Aminotransferase class-V LFT47_13880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFT47_13880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LFT47_13885 PF02910 Fumarate reductase flavoprotein C-term LFT47_13885 PF00890 FAD binding domain LFT47_13890 PF02445 Quinolinate synthetase A protein LFT47_13895 PF00293 NUDIX domain LFT47_13905 PF00324 Amino acid permease LFT47_13910 PF00676 Dehydrogenase E1 component LFT47_13915 PF02780 Transketolase, C-terminal domain LFT47_13915 PF02779 Transketolase, pyrimidine binding domain LFT47_13920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT47_13920 PF00364 Biotin-requiring enzyme LFT47_13920 PF02817 e3 binding domain LFT47_13925 PF00364 Biotin-requiring enzyme LFT47_13925 PF00561 alpha/beta hydrolase fold LFT47_13935 PF00156 Phosphoribosyl transferase domain LFT47_13935 PF05139 Erythromycin esterase LFT47_13940 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LFT47_13940 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LFT47_13945 PF01613 Flavin reductase like domain LFT47_13950 PF09339 IclR helix-turn-helix domain LFT47_13950 PF01614 Bacterial transcriptional regulator LFT47_13960 PF13476 AAA domain LFT47_13965 PF00149 Calcineurin-like phosphoesterase LFT47_13965 PF12320 Type 5 capsule protein repressor C-terminal domain LFT47_13970 PF00230 Major intrinsic protein LFT47_13980 PF02656 Domain of unknown function (DUF202) LFT47_14005 PF07690 Major Facilitator Superfamily LFT47_14010 PF09335 SNARE associated Golgi protein LFT47_14015 PF01725 Ham1 family LFT47_14020 PF03725 3' exoribonuclease family, domain 2 LFT47_14020 PF01138 3' exoribonuclease family, domain 1 LFT47_14025 PF12706 Beta-lactamase superfamily domain LFT47_14025 PF00753 Metallo-beta-lactamase superfamily LFT47_14030 PF01177 Asp/Glu/Hydantoin racemase LFT47_14040 PF02617 ATP-dependent Clp protease adaptor protein ClpS LFT47_14045 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LFT47_14045 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFT47_14050 PF00857 Isochorismatase family LFT47_14055 PF04851 Type III restriction enzyme, res subunit LFT47_14065 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFT47_14075 PF13732 Domain of unknown function (DUF4162) LFT47_14075 PF00005 ABC transporter LFT47_14080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFT47_14110 PF01939 Endonuclease NucS LFT47_14115 PF01979 Amidohydrolase family LFT47_14120 PF00313 'Cold-shock' DNA-binding domain LFT47_14125 PF09924 Uncharacterised conserved protein (DUF2156) LFT47_14140 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LFT47_14145 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFT47_14145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFT47_14150 PF00231 ATP synthase LFT47_14155 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFT47_14155 PF00306 ATP synthase alpha/beta chain, C terminal domain LFT47_14155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFT47_14160 PF00213 ATP synthase delta (OSCP) subunit LFT47_14165 PF00430 ATP synthase B/B' CF(0) LFT47_14170 PF00137 ATP synthase subunit C LFT47_14175 PF00119 ATP synthase A chain LFT47_14190 PF00953 Glycosyl transferase family 4 LFT47_14205 PF01300 Telomere recombination LFT47_14210 PF13649 Methyltransferase domain LFT47_14210 PF17827 PrmC N-terminal domain LFT47_14215 PF00472 RF-1 domain LFT47_14215 PF03462 PCRF domain LFT47_14220 PF07498 Rho termination factor, N-terminal domain LFT47_14220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFT47_14220 PF07497 Rho termination factor, RNA-binding domain LFT47_14225 PF00288 GHMP kinases N terminal domain LFT47_14230 PF00291 Pyridoxal-phosphate dependent enzyme LFT47_14235 PF01842 ACT domain LFT47_14235 PF00742 Homoserine dehydrogenase LFT47_14235 PF03447 Homoserine dehydrogenase, NAD binding domain LFT47_14240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFT47_14240 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFT47_14245 PF05746 DALR anticodon binding domain LFT47_14245 PF03485 Arginyl tRNA synthetase N terminal domain LFT47_14245 PF00750 tRNA synthetases class I (R) LFT47_14260 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT47_14260 PF00175 Oxidoreductase NAD-binding domain LFT47_14260 PF00970 Oxidoreductase FAD-binding domain LFT47_14270 PF01447 Thermolysin metallopeptidase, catalytic domain LFT47_14270 PF02868 Thermolysin metallopeptidase, alpha-helical domain LFT47_14270 PF16485 Protealysin propeptide LFT47_14280 PF01965 DJ-1/PfpI family LFT47_14295 PF00271 Helicase conserved C-terminal domain LFT47_14295 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LFT47_14295 PF11898 Domain of unknown function (DUF3418) LFT47_14295 PF00270 DEAD/DEAH box helicase LFT47_14295 PF04408 Helicase associated domain (HA2) LFT47_14300 PF01230 HIT domain LFT47_14305 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_14305 PF00107 Zinc-binding dehydrogenase LFT47_14310 PF00581 Rhodanese-like domain LFT47_14325 PF01475 Ferric uptake regulator family LFT47_14330 PF00950 ABC 3 transport family LFT47_14335 PF00005 ABC transporter LFT47_14345 PF01595 Cyclin M transmembrane N-terminal domain LFT47_14345 PF00571 CBS domain LFT47_14350 PF01595 Cyclin M transmembrane N-terminal domain LFT47_14350 PF00571 CBS domain LFT47_14350 PF03471 Transporter associated domain LFT47_14355 PF00676 Dehydrogenase E1 component LFT47_14355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT47_14355 PF16078 2-oxoglutarate dehydrogenase N-terminus LFT47_14355 PF16870 2-oxoglutarate dehydrogenase C-terminal LFT47_14355 PF02779 Transketolase, pyrimidine binding domain LFT47_14380 PF04542 Sigma-70 region 2 LFT47_14380 PF08281 Sigma-70, region 4 LFT47_14390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFT47_14395 PF03193 RsgA GTPase LFT47_14400 PF00459 Inositol monophosphatase family LFT47_14405 PF00266 Aminotransferase class-V LFT47_14410 PF08241 Methyltransferase domain LFT47_14420 PF07690 Major Facilitator Superfamily LFT47_14435 PF13180 PDZ domain LFT47_14455 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_14455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_14455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_14460 PF01575 MaoC like domain LFT47_14465 PF07690 Major Facilitator Superfamily LFT47_14465 PF00083 Sugar (and other) transporter LFT47_14470 PF00501 AMP-binding enzyme LFT47_14470 PF13193 AMP-binding enzyme C-terminal domain LFT47_14475 PF03773 Predicted permease LFT47_14495 PF01668 SmpB protein LFT47_14500 PF01551 Peptidase family M23 LFT47_14505 PF02687 FtsX-like permease family LFT47_14505 PF18075 FtsX extracellular domain LFT47_14510 PF00005 ABC transporter LFT47_14515 PF00472 RF-1 domain LFT47_14515 PF03462 PCRF domain LFT47_14630 PF01183 Glycosyl hydrolases family 25 LFT47_14650 PF00535 Glycosyl transferase family 2 LFT47_14660 PF00535 Glycosyl transferase family 2 LFT47_14675 PF01757 Acyltransferase family LFT47_14690 PF00005 ABC transporter LFT47_14695 PF01061 ABC-2 type transporter LFT47_14700 PF17994 Galactofuranosyltransferase 2 N-terminal LFT47_14705 PF03275 UDP-galactopyranose mutase LFT47_14710 PF01580 FtsK/SpoIIIE family LFT47_14710 PF12538 DNA transporter LFT47_14720 PF02467 Transcription factor WhiB LFT47_14725 PF07568 Histidine kinase LFT47_14725 PF12282 Signal transduction histidine kinase LFT47_14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_14730 PF05088 Bacterial NAD-glutamate dehydrogenase LFT47_14765 PF07517 SecA DEAD-like domain LFT47_14765 PF01043 SecA preprotein cross-linking domain LFT47_14765 PF07516 SecA Wing and Scaffold domain LFT47_14770 PF06224 Winged helix DNA-binding domain LFT47_14775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LFT47_14775 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LFT47_14785 PF10647 Lipoprotein LpqB beta-propeller domain LFT47_14785 PF10646 Sporulation and spore germination LFT47_14790 PF00672 HAMP domain LFT47_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_14790 PF00512 His Kinase A (phospho-acceptor) domain LFT47_14795 PF00072 Response regulator receiver domain LFT47_14795 PF00486 Transcriptional regulatory protein, C terminal LFT47_14810 PF14258 Domain of unknown function (DUF4350) LFT47_14815 PF17863 AAA lid domain LFT47_14815 PF07726 ATPase family associated with various cellular activities (AAA) LFT47_14845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_14845 PF00005 ABC transporter LFT47_14850 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_14850 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_14855 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_14870 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_14870 PF14759 Reductase C-terminal LFT47_14875 PF00266 Aminotransferase class-V LFT47_14885 PF00781 Diacylglycerol kinase catalytic domain LFT47_14890 PF00226 DnaJ domain LFT47_14890 PF01556 DnaJ C terminal domain LFT47_14890 PF00684 DnaJ central domain LFT47_14895 PF00588 SpoU rRNA Methylase family LFT47_14900 PF04542 Sigma-70 region 2 LFT47_14900 PF04545 Sigma-70, region 4 LFT47_14905 PF10099 Anti-sigma-K factor rskA LFT47_14910 PF00376 MerR family regulatory protein LFT47_14910 PF09278 MerR, DNA binding LFT47_14915 PF02447 GntP family permease LFT47_14925 PF02585 GlcNAc-PI de-N-acetylase LFT47_14930 PF01012 Electron transfer flavoprotein domain LFT47_14930 PF00766 Electron transfer flavoprotein FAD-binding domain LFT47_14935 PF01012 Electron transfer flavoprotein domain LFT47_14940 PF13180 PDZ domain LFT47_14945 PF04536 TPM domain LFT47_14950 PF04012 PspA/IM30 family LFT47_14955 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_14955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_14955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_14965 PF01012 Electron transfer flavoprotein domain LFT47_14965 PF00766 Electron transfer flavoprotein FAD-binding domain LFT47_14970 PF01012 Electron transfer flavoprotein domain LFT47_15015 PF03699 Uncharacterised protein family (UPF0182) LFT47_15020 PF13180 PDZ domain LFT47_15020 PF05362 Lon protease (S16) C-terminal proteolytic domain LFT47_15035 PF00570 HRDC domain LFT47_15035 PF00580 UvrD/REP helicase N-terminal domain LFT47_15035 PF13361 UvrD-like helicase C-terminal domain LFT47_15040 PF00293 NUDIX domain LFT47_15040 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LFT47_15040 PF09297 NADH pyrophosphatase zinc ribbon domain LFT47_15050 PF00580 UvrD/REP helicase N-terminal domain LFT47_15050 PF13361 UvrD-like helicase C-terminal domain LFT47_15055 PF00580 UvrD/REP helicase N-terminal domain LFT47_15055 PF13361 UvrD-like helicase C-terminal domain LFT47_15070 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT47_15075 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15080 PF00005 ABC transporter LFT47_15085 PF00933 Glycosyl hydrolase family 3 N terminal domain LFT47_15090 PF00202 Aminotransferase class-III LFT47_15100 PF00490 Delta-aminolevulinic acid dehydratase LFT47_15110 PF03900 Porphobilinogen deaminase, C-terminal domain LFT47_15110 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LFT47_15115 PF00762 Ferrochelatase LFT47_15120 PF06778 Chlorite dismutase LFT47_15130 PF01208 Uroporphyrinogen decarboxylase (URO-D) LFT47_15135 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LFT47_15135 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LFT47_15135 PF01488 Shikimate / quinate 5-dehydrogenase LFT47_15140 PF00106 short chain dehydrogenase LFT47_15145 PF00899 ThiF family LFT47_15145 PF00581 Rhodanese-like domain LFT47_15150 PF00440 Bacterial regulatory proteins, tetR family LFT47_15165 PF01329 Pterin 4 alpha carbinolamine dehydratase LFT47_15170 PF05690 Thiazole biosynthesis protein ThiG LFT47_15180 PF01266 FAD dependent oxidoreductase LFT47_15180 PF05690 Thiazole biosynthesis protein ThiG LFT47_15185 PF02581 Thiamine monophosphate synthase LFT47_15190 PF00773 RNB domain LFT47_15190 PF00575 S1 RNA binding domain LFT47_15195 PF00270 DEAD/DEAH box helicase LFT47_15195 PF00271 Helicase conserved C-terminal domain LFT47_15200 PF01555 DNA methylase LFT47_15205 PF02811 PHP domain LFT47_15210 PF05195 Aminopeptidase P, N-terminal domain LFT47_15210 PF00557 Metallopeptidase family M24 LFT47_15220 PF00005 ABC transporter LFT47_15220 PF02687 FtsX-like permease family LFT47_15220 PF12704 MacB-like periplasmic core domain LFT47_15230 PF00899 ThiF family LFT47_15240 PF03448 MgtE intracellular N domain LFT47_15240 PF01769 Divalent cation transporter LFT47_15240 PF00571 CBS domain LFT47_15250 PF10609 NUBPL iron-transfer P-loop NTPase LFT47_15250 PF01883 Iron-sulfur cluster assembly protein LFT47_15255 PF02416 mttA/Hcf106 family LFT47_15265 PF08281 Sigma-70, region 4 LFT47_15265 PF04542 Sigma-70 region 2 LFT47_15270 PF01596 O-methyltransferase LFT47_15290 PF03641 Possible lysine decarboxylase LFT47_15295 PF00005 ABC transporter LFT47_15300 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT47_15305 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15310 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15315 PF07687 Peptidase dimerisation domain LFT47_15315 PF01546 Peptidase family M20/M25/M40 LFT47_15320 PF14602 Hexapeptide repeat of succinyl-transferase LFT47_15320 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LFT47_15335 PF13977 BetI-type transcriptional repressor, C-terminal LFT47_15335 PF00440 Bacterial regulatory proteins, tetR family LFT47_15340 PF16363 GDP-mannose 4,6 dehydratase LFT47_15345 PF00285 Citrate synthase, C-terminal domain LFT47_15350 PF00155 Aminotransferase class I and II LFT47_15355 PF00037 4Fe-4S binding domain LFT47_15385 PF03144 Elongation factor Tu domain 2 LFT47_15385 PF14492 Elongation Factor G, domain II LFT47_15385 PF00679 Elongation factor G C-terminus LFT47_15385 PF00009 Elongation factor Tu GTP binding domain LFT47_15390 PF00005 ABC transporter LFT47_15390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_15395 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_15395 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15400 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_15410 PF00005 ABC transporter LFT47_15410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_15420 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_15420 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15425 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_15445 PF00561 alpha/beta hydrolase fold LFT47_15470 PF01926 50S ribosome-binding GTPase LFT47_15470 PF06071 Protein of unknown function (DUF933) LFT47_15475 PF02646 RmuC family LFT47_15480 PF02401 LytB protein LFT47_15490 PF13742 OB-fold nucleic acid binding domain LFT47_15490 PF02601 Exonuclease VII, large subunit LFT47_15495 PF02609 Exonuclease VII small subunit LFT47_15500 PF03976 Polyphosphate kinase 2 (PPK2) LFT47_15505 PF00155 Aminotransferase class I and II LFT47_15515 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15520 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_15525 PF00005 ABC transporter LFT47_15525 PF00571 CBS domain LFT47_15535 PF05726 Pirin C-terminal cupin domain LFT47_15535 PF02678 Pirin LFT47_15540 PF01869 BadF/BadG/BcrA/BcrD ATPase family LFT47_15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_15545 PF03466 LysR substrate binding domain LFT47_15550 PF07690 Major Facilitator Superfamily LFT47_15555 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT47_15590 PF01544 CorA-like Mg2+ transporter protein LFT47_15605 PF13302 Acetyltransferase (GNAT) domain LFT47_15610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LFT47_15615 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LFT47_15635 PF00933 Glycosyl hydrolase family 3 N terminal domain LFT47_15640 PF13378 Enolase C-terminal domain-like LFT47_15640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT47_15650 PF01232 Mannitol dehydrogenase Rossmann domain LFT47_15650 PF08125 Mannitol dehydrogenase C-terminal domain LFT47_15655 PF02614 Glucuronate isomerase LFT47_15660 PF00356 Bacterial regulatory proteins, lacI family LFT47_15665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_15665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_15675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_15675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_15695 PF00083 Sugar (and other) transporter LFT47_15705 PF02447 GntP family permease LFT47_15750 PF00483 Nucleotidyl transferase LFT47_15755 PF01812 5-formyltetrahydrofolate cyclo-ligase family LFT47_15775 PF00117 Glutamine amidotransferase class-I LFT47_15775 PF00958 GMP synthase C terminal domain LFT47_15775 PF02540 NAD synthase LFT47_15795 PF01266 FAD dependent oxidoreductase LFT47_15795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LFT47_15800 PF00478 IMP dehydrogenase / GMP reductase domain LFT47_15805 PF00571 CBS domain LFT47_15805 PF00478 IMP dehydrogenase / GMP reductase domain LFT47_15810 PF01757 Acyltransferase family LFT47_15815 PF00118 TCP-1/cpn60 chaperonin family LFT47_15820 PF00166 Chaperonin 10 Kd subunit LFT47_15830 PF18096 THUMP domain-like LFT47_15835 PF08501 Shikimate dehydrogenase substrate binding domain LFT47_15840 PF00444 Ribosomal protein L36 LFT47_15845 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFT47_15845 PF07683 Cobalamin synthesis protein cobW C-terminal domain LFT47_15850 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFT47_15855 PF00814 Glycoprotease family LFT47_15860 PF00583 Acetyltransferase (GNAT) family LFT47_15865 PF00814 Glycoprotease family LFT47_15870 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LFT47_15875 PF01168 Alanine racemase, N-terminal domain LFT47_15875 PF00842 Alanine racemase, C-terminal domain LFT47_15890 PF00534 Glycosyl transferases group 1 LFT47_15890 PF13439 Glycosyltransferase Family 4 LFT47_15895 PF01268 Formate--tetrahydrofolate ligase LFT47_15905 PF01658 Myo-inositol-1-phosphate synthase LFT47_15910 PF00248 Aldo/keto reductase family LFT47_15920 PF11941 Domain of unknown function (DUF3459) LFT47_15920 PF00128 Alpha amylase, catalytic domain LFT47_15925 PF00128 Alpha amylase, catalytic domain LFT47_15930 PF00128 Alpha amylase, catalytic domain LFT47_15930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFT47_15935 PF01256 Carbohydrate kinase LFT47_15935 PF03853 YjeF-related protein N-terminus LFT47_15940 PF01648 4'-phosphopantetheinyl transferase superfamily LFT47_15945 PF01380 SIS domain LFT47_15950 PF00485 Phosphoribulokinase / Uridine kinase family LFT47_15955 PF02557 D-alanyl-D-alanine carboxypeptidase LFT47_15960 PF01741 Large-conductance mechanosensitive channel, MscL LFT47_15965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFT47_15965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFT47_15965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFT47_15965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFT47_15970 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LFT47_15970 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LFT47_15975 PF00380 Ribosomal protein S9/S16 LFT47_15980 PF00572 Ribosomal protein L13 LFT47_16020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFT47_16025 PF00437 Type II/IV secretion system protein LFT47_16040 PF01416 tRNA pseudouridine synthase LFT47_16045 PF01196 Ribosomal protein L17 LFT47_16050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LFT47_16050 PF01000 RNA polymerase Rpb3/RpoA insert domain LFT47_16050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LFT47_16055 PF00411 Ribosomal protein S11 LFT47_16060 PF00416 Ribosomal protein S13/S18 LFT47_16065 PF00444 Ribosomal protein L36 LFT47_16070 PF01176 Translation initiation factor 1A / IF-1 LFT47_16075 PF03576 Peptidase family S58 LFT47_16085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_16090 PF00005 ABC transporter LFT47_16090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_16095 PF00005 ABC transporter LFT47_16095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_16100 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_16105 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_16105 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_16115 PF00392 Bacterial regulatory proteins, gntR family LFT47_16115 PF07729 FCD domain LFT47_16120 PF01979 Amidohydrolase family LFT47_16125 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_16130 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_16140 PF00557 Metallopeptidase family M24 LFT47_16150 PF00344 SecY translocase LFT47_16155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LFT47_16160 PF00327 Ribosomal protein L30p/L7e LFT47_16165 PF03719 Ribosomal protein S5, C-terminal domain LFT47_16165 PF00333 Ribosomal protein S5, N-terminal domain LFT47_16170 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LFT47_16175 PF00347 Ribosomal protein L6 LFT47_16180 PF00410 Ribosomal protein S8 LFT47_16185 PF00281 Ribosomal protein L5 LFT47_16185 PF00673 ribosomal L5P family C-terminus LFT47_16190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LFT47_16195 PF00238 Ribosomal protein L14p/L23e LFT47_16200 PF00366 Ribosomal protein S17 LFT47_16210 PF00252 Ribosomal protein L16p/L10e LFT47_16215 PF00189 Ribosomal protein S3, C-terminal domain LFT47_16215 PF07650 KH domain LFT47_16220 PF00237 Ribosomal protein L22p/L17e LFT47_16225 PF00203 Ribosomal protein S19 LFT47_16230 PF00181 Ribosomal Proteins L2, RNA binding domain LFT47_16230 PF03947 Ribosomal Proteins L2, C-terminal domain LFT47_16235 PF00276 Ribosomal protein L23 LFT47_16240 PF00573 Ribosomal protein L4/L1 family LFT47_16245 PF00297 Ribosomal protein L3 LFT47_16250 PF00338 Ribosomal protein S10p/S20e LFT47_16255 PF00232 Glycosyl hydrolase family 1 LFT47_16265 PF03143 Elongation factor Tu C-terminal domain LFT47_16265 PF03144 Elongation factor Tu domain 2 LFT47_16265 PF00009 Elongation factor Tu GTP binding domain LFT47_16270 PF00679 Elongation factor G C-terminus LFT47_16270 PF03764 Elongation factor G, domain IV LFT47_16270 PF03144 Elongation factor Tu domain 2 LFT47_16270 PF14492 Elongation Factor G, domain II LFT47_16270 PF00009 Elongation factor Tu GTP binding domain LFT47_16275 PF00177 Ribosomal protein S7p/S5e LFT47_16280 PF00164 Ribosomal protein S12/S23 LFT47_16285 PF04997 RNA polymerase Rpb1, domain 1 LFT47_16285 PF00623 RNA polymerase Rpb1, domain 2 LFT47_16285 PF04983 RNA polymerase Rpb1, domain 3 LFT47_16285 PF05000 RNA polymerase Rpb1, domain 4 LFT47_16285 PF04998 RNA polymerase Rpb1, domain 5 LFT47_16290 PF04560 RNA polymerase Rpb2, domain 7 LFT47_16290 PF00562 RNA polymerase Rpb2, domain 6 LFT47_16290 PF10385 RNA polymerase beta subunit external 1 domain LFT47_16290 PF04565 RNA polymerase Rpb2, domain 3 LFT47_16290 PF04561 RNA polymerase Rpb2, domain 2 LFT47_16290 PF04563 RNA polymerase beta subunit LFT47_16295 PF02803 Thiolase, C-terminal domain LFT47_16295 PF00108 Thiolase, N-terminal domain LFT47_16300 PF04073 Aminoacyl-tRNA editing domain LFT47_16300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFT47_16300 PF03129 Anticodon binding domain LFT47_16305 PF16320 Ribosomal protein L7/L12 dimerisation domain LFT47_16305 PF00542 Ribosomal protein L7/L12 C-terminal domain LFT47_16310 PF00466 Ribosomal protein L10 LFT47_16325 PF00687 Ribosomal protein L1p/L10e family LFT47_16330 PF03946 Ribosomal protein L11, N-terminal domain LFT47_16330 PF00298 Ribosomal protein L11, RNA binding domain LFT47_16335 PF02357 Transcription termination factor nusG LFT47_16340 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LFT47_16350 PF00155 Aminotransferase class I and II LFT47_16355 PF00196 Bacterial regulatory proteins, luxR family LFT47_16355 PF00072 Response regulator receiver domain LFT47_16380 PF00365 Phosphofructokinase LFT47_16390 PF07690 Major Facilitator Superfamily LFT47_16405 PF01571 Aminomethyltransferase folate-binding domain LFT47_16410 PF01566 Natural resistance-associated macrophage protein LFT47_16410 PF03358 NADPH-dependent FMN reductase LFT47_16415 PF08768 Domain of unknown function (DUF1794) LFT47_16425 PF00486 Transcriptional regulatory protein, C terminal LFT47_16430 PF00583 Acetyltransferase (GNAT) family LFT47_16435 PF17941 Polyphosphate kinase C-terminal domain 1 LFT47_16435 PF13089 Polyphosphate kinase N-terminal domain LFT47_16435 PF02503 Polyphosphate kinase middle domain LFT47_16435 PF13090 Polyphosphate kinase C-terminal domain 2 LFT47_16440 PF00300 Histidine phosphatase superfamily (branch 1) LFT47_16440 PF00293 NUDIX domain LFT47_16445 PF00303 Thymidylate synthase LFT47_16450 PF00186 Dihydrofolate reductase LFT47_16460 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFT47_16460 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFT47_16475 PF01565 FAD binding domain LFT47_16475 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LFT47_16480 PF07690 Major Facilitator Superfamily LFT47_16485 PF01575 MaoC like domain LFT47_16490 PF13452 N-terminal half of MaoC dehydratase LFT47_16495 PF01494 FAD binding domain LFT47_16515 PF00005 ABC transporter LFT47_16520 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_16525 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LFT47_16530 PF00248 Aldo/keto reductase family LFT47_16535 PF00128 Alpha amylase, catalytic domain LFT47_16540 PF00480 ROK family LFT47_16545 PF00999 Sodium/hydrogen exchanger family LFT47_16555 PF05257 CHAP domain LFT47_16555 PF01476 LysM domain LFT47_16575 PF03880 DbpA RNA binding domain LFT47_16575 PF00270 DEAD/DEAH box helicase LFT47_16575 PF00271 Helicase conserved C-terminal domain LFT47_16585 PF00072 Response regulator receiver domain LFT47_16585 PF00486 Transcriptional regulatory protein, C terminal LFT47_16590 PF13493 Domain of unknown function (DUF4118) LFT47_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_16590 PF02702 Osmosensitive K+ channel His kinase sensor domain LFT47_16590 PF00582 Universal stress protein family LFT47_16590 PF00512 His Kinase A (phospho-acceptor) domain LFT47_16595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_16595 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_16595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_16605 PF01638 HxlR-like helix-turn-helix LFT47_16610 PF04185 Phosphoesterase family LFT47_16610 PF05506 Domain of unknown function (DUF756) LFT47_16615 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT47_16620 PF00291 Pyridoxal-phosphate dependent enzyme LFT47_16620 PF00571 CBS domain LFT47_16645 PF13193 AMP-binding enzyme C-terminal domain LFT47_16645 PF00501 AMP-binding enzyme LFT47_16655 PF00085 Thioredoxin LFT47_16680 PF04461 Protein of unknown function (DUF520) LFT47_16685 PF03239 Iron permease FTR1 family LFT47_16690 PF13473 Cupredoxin-like domain LFT47_16690 PF09375 Imelysin LFT47_16695 PF04261 Dyp-type peroxidase family LFT47_16695 PF10518 TAT (twin-arginine translocation) pathway signal sequence LFT47_16700 PF01435 Peptidase family M48 LFT47_16705 PF03845 Spore germination protein LFT47_16710 PF01475 Ferric uptake regulator family LFT47_16715 PF00199 Catalase LFT47_16715 PF06628 Catalase-related immune-responsive LFT47_16725 PF13520 Amino acid permease LFT47_16735 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_16735 PF00107 Zinc-binding dehydrogenase LFT47_16740 PF00171 Aldehyde dehydrogenase family LFT47_16755 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_16760 PF00892 EamA-like transporter family LFT47_16765 PF00202 Aminotransferase class-III LFT47_16770 PF00171 Aldehyde dehydrogenase family LFT47_16775 PF06018 CodY GAF-like domain LFT47_16775 PF17853 GGDEF-like domain LFT47_16775 PF13556 PucR C-terminal helix-turn-helix domain LFT47_16790 PF07690 Major Facilitator Superfamily LFT47_16795 PF07729 FCD domain LFT47_16795 PF00392 Bacterial regulatory proteins, gntR family LFT47_16800 PF00753 Metallo-beta-lactamase superfamily LFT47_16800 PF00581 Rhodanese-like domain LFT47_16805 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_16810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFT47_16810 PF10414 Sirohaem synthase dimerisation region LFT47_16810 PF14824 Sirohaem biosynthesis protein central LFT47_16815 PF00296 Luciferase-like monooxygenase LFT47_16825 PF00005 ABC transporter LFT47_16835 PF00009 Elongation factor Tu GTP binding domain LFT47_16840 PF01507 Phosphoadenosine phosphosulfate reductase family LFT47_16845 PF01507 Phosphoadenosine phosphosulfate reductase family LFT47_16850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFT47_16850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFT47_16860 PF03458 UPF0126 domain LFT47_16875 PF00348 Polyprenyl synthetase LFT47_16880 PF01494 FAD binding domain LFT47_16885 PF01209 ubiE/COQ5 methyltransferase family LFT47_16890 PF00425 chorismate binding enzyme LFT47_16895 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT47_16900 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_16905 PF00005 ABC transporter LFT47_16915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_16925 PF13378 Enolase C-terminal domain-like LFT47_16925 PF18374 Enolase N-terminal domain-like LFT47_16935 PF00356 Bacterial regulatory proteins, lacI family LFT47_16940 PF00251 Glycosyl hydrolases family 32 N-terminal domain LFT47_16940 PF08244 Glycosyl hydrolases family 32 C terminal LFT47_16945 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_16950 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_16980 PF12697 Alpha/beta hydrolase family LFT47_17000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFT47_17005 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFT47_17015 PF01022 Bacterial regulatory protein, arsR family LFT47_17020 PF11066 Protein of unknown function (DUF2867) LFT47_17020 PF13460 NAD(P)H-binding LFT47_17030 PF02839 Carbohydrate binding domain LFT47_17040 PF01022 Bacterial regulatory protein, arsR family LFT47_17045 PF01545 Cation efflux family LFT47_17055 PF07690 Major Facilitator Superfamily LFT47_17075 PF00563 EAL domain LFT47_17075 PF00990 Diguanylate cyclase, GGDEF domain LFT47_17075 PF03707 Bacterial signalling protein N terminal repeat LFT47_17085 PF00990 Diguanylate cyclase, GGDEF domain LFT47_17085 PF10442 FIST C domain LFT47_17085 PF00563 EAL domain LFT47_17085 PF08495 FIST N domain LFT47_17090 PF00440 Bacterial regulatory proteins, tetR family LFT47_17125 PF08448 PAS fold LFT47_17125 PF13426 PAS domain LFT47_17125 PF00072 Response regulator receiver domain LFT47_17125 PF00512 His Kinase A (phospho-acceptor) domain LFT47_17125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_17150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT47_17150 PF00364 Biotin-requiring enzyme LFT47_17150 PF02817 e3 binding domain LFT47_17155 PF02779 Transketolase, pyrimidine binding domain LFT47_17155 PF02780 Transketolase, C-terminal domain LFT47_17160 PF00676 Dehydrogenase E1 component LFT47_17165 PF01037 Lrp/AsnC ligand binding domain LFT47_17175 PF13614 AAA domain LFT47_17195 PF00535 Glycosyl transferase family 2 LFT47_17210 PF13439 Glycosyltransferase Family 4 LFT47_17220 PF02397 Bacterial sugar transferase LFT47_17225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFT47_17225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFT47_17225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFT47_17240 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFT47_17245 PF00483 Nucleotidyl transferase LFT47_17265 PF02627 Carboxymuconolactone decarboxylase family LFT47_17270 PF13399 LytR cell envelope-related transcriptional attenuator LFT47_17270 PF03816 Cell envelope-related transcriptional attenuator domain LFT47_17280 PF01022 Bacterial regulatory protein, arsR family LFT47_17290 PF00005 ABC transporter LFT47_17300 PF00378 Enoyl-CoA hydratase/isomerase LFT47_17305 PF00175 Oxidoreductase NAD-binding domain LFT47_17305 PF00970 Oxidoreductase FAD-binding domain LFT47_17305 PF00111 2Fe-2S iron-sulfur cluster binding domain LFT47_17310 PF01883 Iron-sulfur cluster assembly protein LFT47_17315 PF05138 Phenylacetic acid catabolic protein LFT47_17320 PF06243 Phenylacetic acid degradation B LFT47_17325 PF05138 Phenylacetic acid catabolic protein LFT47_17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_17335 PF00512 His Kinase A (phospho-acceptor) domain LFT47_17340 PF00486 Transcriptional regulatory protein, C terminal LFT47_17340 PF00072 Response regulator receiver domain LFT47_17360 PF00437 Type II/IV secretion system protein LFT47_17365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFT47_17395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFT47_17395 PF00391 PEP-utilising enzyme, mobile domain LFT47_17410 PF03816 Cell envelope-related transcriptional attenuator domain LFT47_17430 PF00326 Prolyl oligopeptidase family LFT47_17430 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LFT47_17435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_17435 PF13426 PAS domain LFT47_17435 PF00512 His Kinase A (phospho-acceptor) domain LFT47_17435 PF00672 HAMP domain LFT47_17445 PF00486 Transcriptional regulatory protein, C terminal LFT47_17445 PF00072 Response regulator receiver domain LFT47_17460 PF00005 ABC transporter LFT47_17460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFT47_17465 PF12911 N-terminal TM domain of oligopeptide transport permease C LFT47_17465 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17470 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFT47_17490 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17500 PF00005 ABC transporter LFT47_17515 PF03061 Thioesterase superfamily LFT47_17520 PF00501 AMP-binding enzyme LFT47_17520 PF14535 AMP-binding enzyme C-terminal domain LFT47_17540 PF00171 Aldehyde dehydrogenase family LFT47_17540 PF01575 MaoC like domain LFT47_17545 PF13350 Tyrosine phosphatase family LFT47_17550 PF00356 Bacterial regulatory proteins, lacI family LFT47_17555 PF13416 Bacterial extracellular solute-binding protein LFT47_17560 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17565 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_17575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_17580 PF00665 Integrase core domain LFT47_17585 PF01810 LysE type translocator LFT47_17590 PF13472 GDSL-like Lipase/Acylhydrolase family LFT47_17600 PF00665 Integrase core domain LFT47_17610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFT47_17610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFT47_17615 PF00378 Enoyl-CoA hydratase/isomerase LFT47_17620 PF02803 Thiolase, C-terminal domain LFT47_17620 PF00108 Thiolase, N-terminal domain LFT47_17635 PF01738 Dienelactone hydrolase family LFT47_17640 PF00324 Amino acid permease LFT47_17655 PF00378 Enoyl-CoA hydratase/isomerase LFT47_17660 PF13193 AMP-binding enzyme C-terminal domain LFT47_17660 PF00501 AMP-binding enzyme LFT47_17665 PF01040 UbiA prenyltransferase family LFT47_17680 PF01578 Cytochrome C assembly protein LFT47_17690 PF02683 Cytochrome C biogenesis protein transmembrane region LFT47_17695 PF00578 AhpC/TSA family LFT47_17700 PF00300 Histidine phosphatase superfamily (branch 1) LFT47_17705 PF04264 YceI-like domain LFT47_17720 PF02629 CoA binding domain LFT47_17720 PF06971 Putative DNA-binding protein N-terminus LFT47_17740 PF12728 Helix-turn-helix domain LFT47_17745 PF00793 DAHP synthetase I family LFT47_17750 PF00356 Bacterial regulatory proteins, lacI family LFT47_17755 PF00392 Bacterial regulatory proteins, gntR family LFT47_17755 PF07729 FCD domain LFT47_17760 PF01070 FMN-dependent dehydrogenase LFT47_17765 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LFT47_17765 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LFT47_17780 PF01022 Bacterial regulatory protein, arsR family LFT47_17785 PF00850 Histone deacetylase domain LFT47_17790 PF02386 Cation transport protein LFT47_17795 PF02080 TrkA-C domain LFT47_17795 PF02254 TrkA-N domain LFT47_17800 PF03807 NADP oxidoreductase coenzyme F420-dependent LFT47_17800 PF14748 Pyrroline-5-carboxylate reductase dimerisation LFT47_17805 PF01261 Xylose isomerase-like TIM barrel LFT47_17810 PF02541 Ppx/GppA phosphatase family LFT47_17825 PF01751 Toprim domain LFT47_17825 PF13368 Topoisomerase C-terminal repeat LFT47_17825 PF01131 DNA topoisomerase LFT47_17835 PF17827 PrmC N-terminal domain LFT47_17835 PF05175 Methyltransferase small domain LFT47_17850 PF17773 UPF0176 acylphosphatase like domain LFT47_17850 PF12368 Rhodanase C-terminal LFT47_17850 PF00581 Rhodanese-like domain LFT47_17860 PF09369 Domain of unknown function (DUF1998) LFT47_17860 PF00271 Helicase conserved C-terminal domain LFT47_17860 PF00270 DEAD/DEAH box helicase LFT47_17890 PF00437 Type II/IV secretion system protein LFT47_17900 PF01612 3'-5' exonuclease LFT47_17900 PF01367 5'-3' exonuclease, C-terminal SAM fold LFT47_17900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFT47_17900 PF00476 DNA polymerase family A LFT47_17915 PF00293 NUDIX domain LFT47_17920 PF00633 Helix-hairpin-helix motif LFT47_17920 PF00730 HhH-GPD superfamily base excision DNA repair protein LFT47_17920 PF10576 Iron-sulfur binding domain of endonuclease III LFT47_17930 PF16177 Acetyl-coenzyme A synthetase N-terminus LFT47_17930 PF00501 AMP-binding enzyme LFT47_17930 PF13193 AMP-binding enzyme C-terminal domain LFT47_17940 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17945 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17950 PF02449 Beta-galactosidase LFT47_17950 PF08532 Beta-galactosidase trimerisation domain LFT47_17950 PF08533 Beta-galactosidase C-terminal domain LFT47_17955 PF00455 DeoR C terminal sensor domain LFT47_17955 PF08220 DeoR-like helix-turn-helix domain LFT47_17960 PF00356 Bacterial regulatory proteins, lacI family LFT47_17970 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17975 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_17985 PF16875 Glycosyl hydrolase family 36 N-terminal domain LFT47_17985 PF16874 Glycosyl hydrolase family 36 C-terminal domain LFT47_17990 PF01220 Dehydroquinase class II LFT47_17995 PF02674 Colicin V production protein LFT47_18000 PF13545 Crp-like helix-turn-helix domain LFT47_18000 PF00027 Cyclic nucleotide-binding domain LFT47_18020 PF00905 Penicillin binding protein transpeptidase domain LFT47_18020 PF00912 Transglycosylase LFT47_18025 PF00149 Calcineurin-like phosphoesterase LFT47_18030 PF00664 ABC transporter transmembrane region LFT47_18030 PF00005 ABC transporter LFT47_18035 PF00005 ABC transporter LFT47_18035 PF00664 ABC transporter transmembrane region LFT47_18055 PF01259 SAICAR synthetase LFT47_18060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LFT47_18060 PF02843 Phosphoribosylglycinamide synthetase, C domain LFT47_18060 PF02844 Phosphoribosylglycinamide synthetase, N domain LFT47_18080 PF00375 Sodium:dicarboxylate symporter family LFT47_18085 PF04960 Glutaminase LFT47_18095 PF01177 Asp/Glu/Hydantoin racemase LFT47_18100 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT47_18105 PF00456 Transketolase, thiamine diphosphate binding domain LFT47_18105 PF17831 Pyruvate dehydrogenase E1 component middle domain LFT47_18115 PF12804 MobA-like NTP transferase domain LFT47_18120 PF00665 Integrase core domain LFT47_18125 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LFT47_18125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LFT47_18125 PF01799 [2Fe-2S] binding domain LFT47_18135 PF13478 XdhC Rossmann domain LFT47_18135 PF02625 XdhC and CoxI family LFT47_18140 PF00860 Permease family LFT47_18145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFT47_18150 PF01979 Amidohydrolase family LFT47_18165 PF01014 Uricase LFT47_18170 PF00860 Permease family LFT47_18180 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT47_18185 PF09339 IclR helix-turn-helix domain LFT47_18185 PF01614 Bacterial transcriptional regulator LFT47_18190 PF03949 Malic enzyme, NAD binding domain LFT47_18190 PF00390 Malic enzyme, N-terminal domain LFT47_18195 PF01274 Malate synthase LFT47_18205 PF07883 Cupin domain LFT47_18205 PF05899 Protein of unknown function (DUF861) LFT47_18210 PF00144 Beta-lactamase LFT47_18210 PF11954 Domain of unknown function (DUF3471) LFT47_18215 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_18215 PF17862 AAA+ lid domain LFT47_18215 PF06480 FtsH Extracellular LFT47_18215 PF01434 Peptidase family M41 LFT47_18230 PF09924 Uncharacterised conserved protein (DUF2156) LFT47_18235 PF00723 Glycosyl hydrolases family 15 LFT47_18245 PF13291 ACT domain LFT47_18245 PF00291 Pyridoxal-phosphate dependent enzyme LFT47_18255 PF00912 Transglycosylase LFT47_18255 PF00905 Penicillin binding protein transpeptidase domain LFT47_18260 PF00106 short chain dehydrogenase LFT47_18265 PF00171 Aldehyde dehydrogenase family LFT47_18270 PF00465 Iron-containing alcohol dehydrogenase LFT47_18275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT47_18275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT47_18280 PF00171 Aldehyde dehydrogenase family LFT47_18285 PF13378 Enolase C-terminal domain-like LFT47_18285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT47_18295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LFT47_18300 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18305 PF00005 ABC transporter LFT47_18305 PF00571 CBS domain LFT47_18310 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18330 PF00795 Carbon-nitrogen hydrolase LFT47_18365 PF01928 CYTH domain LFT47_18365 PF05235 CHAD domain LFT47_18375 PF12802 MarR family LFT47_18405 PF10944 Protein of unknown function (DUF2630) LFT47_18410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT47_18410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT47_18415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LFT47_18415 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LFT47_18420 PF03480 Bacterial extracellular solute-binding protein, family 7 LFT47_18430 PF00356 Bacterial regulatory proteins, lacI family LFT47_18445 PF17754 MftR C-terminal domain LFT47_18445 PF00440 Bacterial regulatory proteins, tetR family LFT47_18465 PF17755 UvrA DNA-binding domain LFT47_18465 PF17760 UvrA interaction domain LFT47_18475 PF14461 Prokaryotic E2 family B LFT47_18475 PF00899 ThiF family LFT47_18490 PF07690 Major Facilitator Superfamily LFT47_18495 PF00392 Bacterial regulatory proteins, gntR family LFT47_18495 PF07729 FCD domain LFT47_18500 PF02780 Transketolase, C-terminal domain LFT47_18500 PF02779 Transketolase, pyrimidine binding domain LFT47_18505 PF00456 Transketolase, thiamine diphosphate binding domain LFT47_18510 PF00083 Sugar (and other) transporter LFT47_18510 PF07690 Major Facilitator Superfamily LFT47_18515 PF01261 Xylose isomerase-like TIM barrel LFT47_18525 PF02734 DAK2 domain LFT47_18525 PF02733 Dak1 domain LFT47_18530 PF02502 Ribose/Galactose Isomerase LFT47_18540 PF00356 Bacterial regulatory proteins, lacI family LFT47_18545 PF01547 Bacterial extracellular solute-binding protein LFT47_18550 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18555 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18560 PF04041 beta-1,4-mannooligosaccharide phosphorylase LFT47_18575 PF01869 BadF/BadG/BcrA/BcrD ATPase family LFT47_18585 PF03781 Sulfatase-modifying factor enzyme 1 LFT47_18595 PF00664 ABC transporter transmembrane region LFT47_18595 PF00005 ABC transporter LFT47_18600 PF00664 ABC transporter transmembrane region LFT47_18600 PF00005 ABC transporter LFT47_18615 PF02525 Flavodoxin-like fold LFT47_18625 PF01638 HxlR-like helix-turn-helix LFT47_18630 PF00975 Thioesterase domain LFT47_18635 PF03358 NADPH-dependent FMN reductase LFT47_18645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFT47_18645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFT47_18655 PF00561 alpha/beta hydrolase fold LFT47_18660 PF17200 Single Cache domain 2 LFT47_18660 PF07730 Histidine kinase LFT47_18670 PF00005 ABC transporter LFT47_18670 PF17912 MalK OB fold domain LFT47_18680 PF13350 Tyrosine phosphatase family LFT47_18685 PF00149 Calcineurin-like phosphoesterase LFT47_18690 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18695 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18700 PF01979 Amidohydrolase family LFT47_18705 PF01546 Peptidase family M20/M25/M40 LFT47_18715 PF00005 ABC transporter LFT47_18715 PF00571 CBS domain LFT47_18720 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18725 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18735 PF17391 Urocanase N-terminal domain LFT47_18735 PF01175 Urocanase Rossmann-like domain LFT47_18735 PF17392 Urocanase C-terminal domain LFT47_18740 PF00221 Aromatic amino acid lyase LFT47_18765 PF00909 Ammonium Transporter Family LFT47_18795 PF00474 Sodium:solute symporter family LFT47_18815 PF00005 ABC transporter LFT47_18825 PF01261 Xylose isomerase-like TIM barrel LFT47_18830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFT47_18830 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFT47_18835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_18835 PF00205 Thiamine pyrophosphate enzyme, central domain LFT47_18835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT47_18840 PF02595 Glycerate kinase family LFT47_18845 PF01979 Amidohydrolase family LFT47_18855 PF00578 AhpC/TSA family LFT47_18865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT47_18865 PF00205 Thiamine pyrophosphate enzyme, central domain LFT47_18865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_18870 PF00005 ABC transporter LFT47_18875 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18880 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT47_18890 PF00155 Aminotransferase class I and II LFT47_18895 PF07969 Amidohydrolase family LFT47_18900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT47_18900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT47_18905 PF00005 ABC transporter LFT47_18910 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_18925 PF00266 Aminotransferase class-V LFT47_18935 PF00576 HIUase/Transthyretin family LFT47_18945 PF00171 Aldehyde dehydrogenase family LFT47_18950 PF07722 Peptidase C26 LFT47_18955 PF00120 Glutamine synthetase, catalytic domain LFT47_18960 PF07729 FCD domain LFT47_18960 PF00392 Bacterial regulatory proteins, gntR family LFT47_18975 PF00156 Phosphoribosyl transferase domain LFT47_18980 PF00586 AIR synthase related protein, N-terminal domain LFT47_18980 PF02769 AIR synthase related protein, C-terminal domain LFT47_18985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT47_18985 PF18029 Glyoxalase-like domain LFT47_18995 PF01022 Bacterial regulatory protein, arsR family LFT47_19010 PF10431 C-terminal, D2-small domain, of ClpB protein LFT47_19010 PF02861 Clp amino terminal domain, pathogenicity island component LFT47_19010 PF17871 AAA lid domain LFT47_19010 PF07724 AAA domain (Cdc48 subfamily) LFT47_19010 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_19040 PF13732 Domain of unknown function (DUF4162) LFT47_19040 PF00005 ABC transporter LFT47_19050 PF00754 F5/8 type C domain LFT47_19050 PF13088 BNR repeat-like domain LFT47_19050 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase LFT47_19055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFT47_19055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFT47_19055 PF00205 Thiamine pyrophosphate enzyme, central domain LFT47_19060 PF03733 Inner membrane component domain LFT47_19065 PF04679 ATP dependent DNA ligase C terminal region LFT47_19065 PF01068 ATP dependent DNA ligase domain LFT47_19085 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LFT47_19090 PF05962 HutD LFT47_19095 PF00893 Small Multidrug Resistance protein LFT47_19100 PF00893 Small Multidrug Resistance protein LFT47_19105 PF00248 Aldo/keto reductase family LFT47_19110 PF00753 Metallo-beta-lactamase superfamily LFT47_19115 PF00270 DEAD/DEAH box helicase LFT47_19115 PF00271 Helicase conserved C-terminal domain LFT47_19120 PF08241 Methyltransferase domain LFT47_19125 PF07690 Major Facilitator Superfamily LFT47_19130 PF04185 Phosphoesterase family LFT47_19145 PF01546 Peptidase family M20/M25/M40 LFT47_19145 PF07687 Peptidase dimerisation domain LFT47_19150 PF00083 Sugar (and other) transporter LFT47_19155 PF07690 Major Facilitator Superfamily LFT47_19160 PF02390 Putative methyltransferase LFT47_19165 PF04055 Radical SAM superfamily LFT47_19165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LFT47_19180 PF04545 Sigma-70, region 4 LFT47_19180 PF04542 Sigma-70 region 2 LFT47_19195 PF00271 Helicase conserved C-terminal domain LFT47_19195 PF00176 SNF2 family N-terminal domain LFT47_19195 PF04434 SWIM zinc finger LFT47_19220 PF02653 Branched-chain amino acid transport system / permease component LFT47_19230 PF00005 ABC transporter LFT47_19245 PF00324 Amino acid permease LFT47_19250 PF01042 Endoribonuclease L-PSP LFT47_19255 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT47_19270 PF00501 AMP-binding enzyme LFT47_19270 PF13193 AMP-binding enzyme C-terminal domain LFT47_19275 PF01494 FAD binding domain LFT47_19285 PF13411 MerR HTH family regulatory protein LFT47_19290 PF00226 DnaJ domain LFT47_19290 PF01556 DnaJ C terminal domain LFT47_19290 PF00684 DnaJ central domain LFT47_19295 PF01025 GrpE LFT47_19300 PF00012 Hsp70 protein LFT47_19305 PF05675 Protein of unknown function (DUF817) LFT47_19315 PF00440 Bacterial regulatory proteins, tetR family LFT47_19315 PF13305 Tetracyclin repressor-like, C-terminal domain LFT47_19325 PF03176 MMPL family LFT47_19340 PF00155 Aminotransferase class I and II LFT47_19345 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT47_19355 PF13847 Methyltransferase domain LFT47_19360 PF03795 YCII-related domain LFT47_19365 PF08281 Sigma-70, region 4 LFT47_19365 PF04542 Sigma-70 region 2 LFT47_19385 PF01810 LysE type translocator LFT47_19395 PF00356 Bacterial regulatory proteins, lacI family LFT47_19400 PF01156 Inosine-uridine preferring nucleoside hydrolase LFT47_19405 PF07690 Major Facilitator Superfamily LFT47_19410 PF00294 pfkB family carbohydrate kinase LFT47_19415 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFT47_19420 PF00425 chorismate binding enzyme LFT47_19420 PF00117 Glutamine amidotransferase class-I LFT47_19420 PF04715 Anthranilate synthase component I, N terminal region LFT47_19425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFT47_19440 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_19440 PF18113 Rubredoxin binding C-terminal domain LFT47_19450 PF13091 PLD-like domain LFT47_19450 PF13396 Phospholipase_D-nuclease N-terminal LFT47_19480 PF02423 Ornithine cyclodeaminase/mu-crystallin family LFT47_19505 PF01053 Cys/Met metabolism PLP-dependent enzyme LFT47_19510 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFT47_19520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFT47_19530 PF00005 ABC transporter LFT47_19535 PF09819 ABC-type cobalt transport system, permease component LFT47_19550 PF03334 Na+/H+ antiporter subunit LFT47_19555 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LFT47_19565 PF00361 Proton-conducting membrane transporter LFT47_19570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LFT47_19575 PF13244 Domain of unknown function (DUF4040) LFT47_19575 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LFT47_19575 PF00361 Proton-conducting membrane transporter LFT47_19575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFT47_19590 PF00933 Glycosyl hydrolase family 3 N terminal domain LFT47_19590 PF01915 Glycosyl hydrolase family 3 C-terminal domain LFT47_19595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFT47_19600 PF06826 Predicted Permease Membrane Region LFT47_19600 PF02080 TrkA-C domain LFT47_19605 PF00999 Sodium/hydrogen exchanger family LFT47_19615 PF00692 dUTPase LFT47_19645 PF03466 LysR substrate binding domain LFT47_19645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_19650 PF17926 Tetracyclin repressor-like, C-terminal domain LFT47_19650 PF00440 Bacterial regulatory proteins, tetR family LFT47_19660 PF02261 Aspartate decarboxylase LFT47_19670 PF00723 Glycosyl hydrolases family 15 LFT47_19675 PF00296 Luciferase-like monooxygenase LFT47_19685 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT47_19690 PF01842 ACT domain LFT47_19690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFT47_19690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFT47_19700 PF04892 VanZ like family LFT47_19720 PF00296 Luciferase-like monooxygenase LFT47_19725 PF00296 Luciferase-like monooxygenase LFT47_19730 PF00296 Luciferase-like monooxygenase LFT47_19740 PF00005 ABC transporter LFT47_19745 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_19760 PF04978 Protein of unknown function (DUF664) LFT47_19770 PF05872 Bacterial protein of unknown function (DUF853) LFT47_19780 PF00578 AhpC/TSA family LFT47_19780 PF02683 Cytochrome C biogenesis protein transmembrane region LFT47_19780 PF17991 Thioredoxin like C-terminal domain LFT47_19785 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LFT47_19785 PF05425 Copper resistance protein D LFT47_19790 PF00216 Bacterial DNA-binding protein LFT47_19810 PF00253 Ribosomal protein S14p/S29e LFT47_19815 PF00471 Ribosomal protein L33 LFT47_19820 PF00830 Ribosomal L28 family LFT47_19825 PF00175 Oxidoreductase NAD-binding domain LFT47_19825 PF00042 Globin LFT47_19825 PF00970 Oxidoreductase FAD-binding domain LFT47_19875 PF00005 ABC transporter LFT47_19880 PF01032 FecCD transport family LFT47_19885 PF01032 FecCD transport family LFT47_19920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_19920 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_19920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_19935 PF01613 Flavin reductase like domain LFT47_19940 PF00248 Aldo/keto reductase family LFT47_19955 PF00534 Glycosyl transferases group 1 LFT47_19955 PF13439 Glycosyltransferase Family 4 LFT47_19970 PF12728 Helix-turn-helix domain LFT47_19970 PF02661 Fic/DOC family LFT47_19975 PF07729 FCD domain LFT47_19975 PF00392 Bacterial regulatory proteins, gntR family LFT47_19985 PF10415 Fumarase C C-terminus LFT47_19985 PF00206 Lyase LFT47_19990 PF00324 Amino acid permease LFT47_19995 PF07729 FCD domain LFT47_19995 PF00392 Bacterial regulatory proteins, gntR family LFT47_20005 PF00248 Aldo/keto reductase family LFT47_20010 PF05336 L-rhamnose mutarotase LFT47_20020 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_20025 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_20030 PF01547 Bacterial extracellular solute-binding protein LFT47_20035 PF13378 Enolase C-terminal domain-like LFT47_20035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFT47_20040 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT47_20050 PF00004 ATPase family associated with various cellular activities (AAA) LFT47_20050 PF17862 AAA+ lid domain LFT47_20050 PF06480 FtsH Extracellular LFT47_20050 PF01434 Peptidase family M41 LFT47_20090 PF00144 Beta-lactamase LFT47_20095 PF00698 Acyl transferase domain LFT47_20095 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_20095 PF08990 Erythronolide synthase docking LFT47_20095 PF16197 Ketoacyl-synthetase C-terminal extension LFT47_20095 PF02801 Beta-ketoacyl synthase, C-terminal domain LFT47_20095 PF00109 Beta-ketoacyl synthase, N-terminal domain LFT47_20095 PF08659 KR domain LFT47_20095 PF00550 Phosphopantetheine attachment site LFT47_20095 PF14765 Polyketide synthase dehydratase LFT47_20100 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFT47_20110 PF00155 Aminotransferase class I and II LFT47_20130 PF03746 LamB/YcsF family LFT47_20135 PF08946 Osmosensory transporter coiled coil LFT47_20135 PF00083 Sugar (and other) transporter LFT47_20140 PF03737 Aldolase/RraA LFT47_20150 PF02720 Domain of unknown function (DUF222) LFT47_20155 PF01037 Lrp/AsnC ligand binding domain LFT47_20160 PF01810 LysE type translocator LFT47_20180 PF00196 Bacterial regulatory proteins, luxR family LFT47_20180 PF00072 Response regulator receiver domain LFT47_20185 PF07730 Histidine kinase LFT47_20185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_20185 PF13492 GAF domain LFT47_20190 PF03949 Malic enzyme, NAD binding domain LFT47_20190 PF00390 Malic enzyme, N-terminal domain LFT47_20195 PF00440 Bacterial regulatory proteins, tetR family LFT47_20195 PF17925 Tetracyclin repressor-like, C-terminal domain LFT47_20205 PF03737 Aldolase/RraA LFT47_20210 PF07690 Major Facilitator Superfamily LFT47_20215 PF00083 Sugar (and other) transporter LFT47_20220 PF07690 Major Facilitator Superfamily LFT47_20235 PF00324 Amino acid permease LFT47_20245 PF01047 MarR family LFT47_20250 PF08125 Mannitol dehydrogenase C-terminal domain LFT47_20250 PF01232 Mannitol dehydrogenase Rossmann domain LFT47_20255 PF02378 Phosphotransferase system, EIIC LFT47_20255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFT47_20255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFT47_20265 PF05524 PEP-utilising enzyme, N-terminal LFT47_20265 PF00391 PEP-utilising enzyme, mobile domain LFT47_20265 PF02896 PEP-utilising enzyme, TIM barrel domain LFT47_20270 PF00381 PTS HPr component phosphorylation site LFT47_20275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFT47_20275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFT47_20275 PF02770 Acyl-CoA dehydrogenase, middle domain LFT47_20280 PF17754 MftR C-terminal domain LFT47_20280 PF00440 Bacterial regulatory proteins, tetR family LFT47_20310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LFT47_20310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LFT47_20330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_20330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_20335 PF00440 Bacterial regulatory proteins, tetR family LFT47_20335 PF16295 Tetracyclin repressor-like, C-terminal domain LFT47_20340 PF03358 NADPH-dependent FMN reductase LFT47_20360 PF00155 Aminotransferase class I and II LFT47_20380 PF02817 e3 binding domain LFT47_20380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFT47_20380 PF00364 Biotin-requiring enzyme LFT47_20385 PF02779 Transketolase, pyrimidine binding domain LFT47_20385 PF02780 Transketolase, C-terminal domain LFT47_20390 PF00676 Dehydrogenase E1 component LFT47_20395 PF00155 Aminotransferase class I and II LFT47_20400 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LFT47_20415 PF08328 Adenylosuccinate lyase C-terminal LFT47_20415 PF00206 Lyase LFT47_20435 PF03061 Thioesterase superfamily LFT47_20440 PF00106 short chain dehydrogenase LFT47_20445 PF00083 Sugar (and other) transporter LFT47_20445 PF08946 Osmosensory transporter coiled coil LFT47_20450 PF02626 Carboxyltransferase domain, subdomain A and B LFT47_20455 PF02682 Carboxyltransferase domain, subdomain C and D LFT47_20460 PF03746 LamB/YcsF family LFT47_20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFT47_20465 PF03466 LysR substrate binding domain LFT47_20475 PF03737 Aldolase/RraA LFT47_20480 PF00155 Aminotransferase class I and II LFT47_20495 PF03328 HpcH/HpaI aldolase/citrate lyase family LFT47_20500 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFT47_20505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT47_20510 PF00171 Aldehyde dehydrogenase family LFT47_20515 PF00392 Bacterial regulatory proteins, gntR family LFT47_20515 PF07729 FCD domain LFT47_20520 PF03737 Aldolase/RraA LFT47_20525 PF01494 FAD binding domain LFT47_20525 PF07976 Phenol hydroxylase, C-terminal dimerisation domain LFT47_20530 PF12697 Alpha/beta hydrolase family LFT47_20575 PF00106 short chain dehydrogenase LFT47_20590 PF00664 ABC transporter transmembrane region LFT47_20590 PF00005 ABC transporter LFT47_20595 PF00486 Transcriptional regulatory protein, C terminal LFT47_20595 PF00072 Response regulator receiver domain LFT47_20600 PF00512 His Kinase A (phospho-acceptor) domain LFT47_20600 PF00582 Universal stress protein family LFT47_20600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFT47_20600 PF13493 Domain of unknown function (DUF4118) LFT47_20600 PF02702 Osmosensitive K+ channel His kinase sensor domain LFT47_20605 PF02669 K+-transporting ATPase, c chain LFT47_20615 PF03814 Potassium-transporting ATPase A subunit LFT47_20640 PF03812 2-keto-3-deoxygluconate permease LFT47_20645 PF08240 Alcohol dehydrogenase GroES-like domain LFT47_20645 PF00107 Zinc-binding dehydrogenase LFT47_20650 PF17042 Nucleotide-binding C-terminal domain LFT47_20650 PF07005 Sugar-binding N-terminal domain LFT47_20655 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LFT47_20655 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LFT47_20660 PF07729 FCD domain LFT47_20660 PF00392 Bacterial regulatory proteins, gntR family LFT47_20665 PF00356 Bacterial regulatory proteins, lacI family LFT47_20670 PF01547 Bacterial extracellular solute-binding protein LFT47_20675 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_20680 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_20685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_20685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_20700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_20700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_20705 PF00480 ROK family LFT47_20710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFT47_20710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFT47_20715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFT47_20715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFT47_20720 PF01261 Xylose isomerase-like TIM barrel LFT47_20725 PF04030 D-arabinono-1,4-lactone oxidase LFT47_20725 PF01565 FAD binding domain LFT47_20730 PF00480 ROK family LFT47_20735 PF01263 Aldose 1-epimerase LFT47_20740 PF01494 FAD binding domain LFT47_20770 PF01741 Large-conductance mechanosensitive channel, MscL LFT47_20785 PF01619 Proline dehydrogenase LFT47_20790 PF07690 Major Facilitator Superfamily LFT47_20795 PF07729 FCD domain LFT47_20795 PF00392 Bacterial regulatory proteins, gntR family LFT47_20800 PF01177 Asp/Glu/Hydantoin racemase LFT47_20805 PF01979 Amidohydrolase family LFT47_20805 PF00449 Urease alpha-subunit, N-terminal domain LFT47_20815 PF00313 'Cold-shock' DNA-binding domain LFT47_20855 PF01042 Endoribonuclease L-PSP LFT47_20860 PF00005 ABC transporter LFT47_20865 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_20870 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFT47_20875 PF01070 FMN-dependent dehydrogenase LFT47_20885 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFT47_20900 PF02233 NAD(P) transhydrogenase beta subunit LFT47_20905 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LFT47_20910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LFT47_20910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LFT47_20915 PF03358 NADPH-dependent FMN reductase LFT47_20920 PF01614 Bacterial transcriptional regulator LFT47_20920 PF09339 IclR helix-turn-helix domain LFT47_20925 PF01144 Coenzyme A transferase LFT47_20930 PF01144 Coenzyme A transferase LFT47_20935 PF02803 Thiolase, C-terminal domain LFT47_20935 PF00108 Thiolase, N-terminal domain LFT47_20940 PF02627 Carboxymuconolactone decarboxylase family LFT47_20950 PF10397 Adenylosuccinate lyase C-terminus LFT47_20950 PF00206 Lyase LFT47_20960 PF00775 Dioxygenase LFT47_20960 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LFT47_20965 PF01261 Xylose isomerase-like TIM barrel LFT47_20965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFT47_20970 PF08501 Shikimate dehydrogenase substrate binding domain LFT47_20970 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LFT47_20975 PF01614 Bacterial transcriptional regulator LFT47_20975 PF09339 IclR helix-turn-helix domain LFT47_20980 PF00083 Sugar (and other) transporter LFT47_20980 PF07690 Major Facilitator Superfamily LFT47_20990 PF02597 ThiS family LFT47_21005 PF02447 GntP family permease LFT47_21015 PF07969 Amidohydrolase family LFT47_21025 PF00294 pfkB family carbohydrate kinase LFT47_21030 PF01614 Bacterial transcriptional regulator LFT47_21030 PF09339 IclR helix-turn-helix domain LFT47_21035 PF01042 Endoribonuclease L-PSP LFT47_21040 PF01590 GAF domain LFT47_21040 PF00990 Diguanylate cyclase, GGDEF domain LFT47_21040 PF00360 Phytochrome region LFT47_21040 PF00563 EAL domain LFT47_21045 PF00581 Rhodanese-like domain LFT47_21050 PF01614 Bacterial transcriptional regulator LFT47_21050 PF09339 IclR helix-turn-helix domain LFT47_21055 PF00728 Glycosyl hydrolase family 20, catalytic domain LFT47_21055 PF02838 Glycosyl hydrolase family 20, domain 2 LFT47_21055 PF07691 PA14 domain LFT47_21060 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_21065 PF00528 Binding-protein-dependent transport system inner membrane component LFT47_21070 PF01547 Bacterial extracellular solute-binding protein LFT47_21075 PF02583 Metal-sensitive transcriptional repressor LFT47_21085 PF00403 Heavy-metal-associated domain LFT47_21115 PF01554 MatE LFT47_21130 PF03061 Thioesterase superfamily LFT47_21140 PF00772 DnaB-like helicase N terminal domain LFT47_21140 PF03796 DnaB-like helicase C terminal domain LFT47_21155 PF03358 NADPH-dependent FMN reductase LFT47_21165 PF01281 Ribosomal protein L9, N-terminal domain LFT47_21165 PF03948 Ribosomal protein L9, C-terminal domain LFT47_21170 PF01084 Ribosomal protein S18 LFT47_21175 PF00436 Single-strand binding protein family LFT47_21180 PF01250 Ribosomal protein S6 LFT47_21185 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LFT47_21195 PF02127 Aminopeptidase I zinc metalloprotease (M18) LFT47_21205 PF00072 Response regulator receiver domain LFT47_21205 PF00196 Bacterial regulatory proteins, luxR family LFT47_21210 PF07730 Histidine kinase LFT47_21220 PF00005 ABC transporter LFT47_21235 PF00005 ABC transporter LFT47_21240 PF00005 ABC transporter LFT47_21240 PF02687 FtsX-like permease family LFT47_21240 PF12704 MacB-like periplasmic core domain LFT47_21250 PF07690 Major Facilitator Superfamily LFT47_21255 PF08220 DeoR-like helix-turn-helix domain LFT47_21255 PF00455 DeoR C terminal sensor domain LFT47_21260 PF12848 ABC transporter LFT47_21260 PF16326 ABC transporter C-terminal domain LFT47_21260 PF00005 ABC transporter LFT47_21265 PF00440 Bacterial regulatory proteins, tetR family LFT47_21270 PF01494 FAD binding domain LFT47_21275 PF00905 Penicillin binding protein transpeptidase domain LFT47_21280 PF00196 Bacterial regulatory proteins, luxR family LFT47_21280 PF00072 Response regulator receiver domain LFT47_21285 PF07730 Histidine kinase LFT47_21295 PF00005 ABC transporter LFT47_21300 PF00665 Integrase core domain LFT47_21305 PF01638 HxlR-like helix-turn-helix LFT47_21310 PF13460 NAD(P)H-binding LFT47_21330 PF00300 Histidine phosphatase superfamily (branch 1) LFT47_21335 PF01743 Poly A polymerase head domain LFT47_21335 PF12627 Probable RNA and SrmB- binding site of polymerase A LFT47_21335 PF01966 HD domain LFT47_21340 PF00293 NUDIX domain LFT47_21345 PF03023 Lipid II flippase MurJ LFT47_21355 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFT47_21360 PF00085 Thioredoxin LFT47_21365 PF17762 HTH domain found in ParB protein LFT47_21365 PF02195 ParB-like nuclease domain LFT47_21370 PF13614 AAA domain LFT47_21375 PF02527 rRNA small subunit methyltransferase G LFT47_21385 PF02096 60Kd inner membrane protein LFT47_21390 PF01809 Putative membrane protein insertion efficiency factor LFT47_21395 PF00825 Ribonuclease P LFT47_21400 PF00468 Ribosomal protein L34