AHiyo4_00050	SM00421	helix_turn_helix, Lux Regulon
AHiyo4_00050	SM00448	cheY-homologous receiver domain
AHiyo4_00090	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_00100	SM00014	Acid phosphatase homologues
AHiyo4_00100	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AHiyo4_00130	SM00420	helix_turn_helix, Deoxyribose operon repressor
AHiyo4_00130	SM01134	AHiyo4_00130
AHiyo4_00140	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_00220	SM00855	Phosphoglycerate mutase family
AHiyo4_00340	SM00470	ParB-like nuclease domain
AHiyo4_00380	SM00393	Putative single-stranded nucleic acids-binding domain
AHiyo4_00410	SM01234	AHiyo4_00410
AHiyo4_00430	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_00440	SM00760	Bacterial dnaA protein helix-turn-helix domain
AHiyo4_00450	SM00480	DNA polymerase III beta subunit
AHiyo4_00460	SM01350	AHiyo4_00460
AHiyo4_00510	SM00387	Histidine kinase-like ATPases
AHiyo4_00510	SM00433	TopoisomeraseII
AHiyo4_00520	SM00434	DNA Topoisomerase IV
AHiyo4_00690	SM00740	AHiyo4_00690
AHiyo4_00700	SM00220	Serine/Threonine protein kinases, catalytic domain
AHiyo4_00710	SM00220	Serine/Threonine protein kinases, catalytic domain
AHiyo4_00760	SM00331	Sigma factor PP2C-like phosphatases
AHiyo4_00760	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AHiyo4_00770	SM00240	Forkhead associated domain
AHiyo4_00780	SM00240	Forkhead associated domain
AHiyo4_01060	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_01240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_01240	SM00895	AHiyo4_01240
AHiyo4_01270	SM00796	Allophanate hydrolase subunit 1
AHiyo4_01280	SM00797	Allophanate hydrolase subunit 2
AHiyo4_01370	SM00988	UreE urease accessory protein, N-terminal domain
AHiyo4_01500	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_01530	SM00421	helix_turn_helix, Lux Regulon
AHiyo4_01540	SM00267	diguanylate cyclase
AHiyo4_01620	SM00954	Region found in RelA / SpoT proteins
AHiyo4_01670	SM00052	Putative diguanylate phosphodiesterase
AHiyo4_01670	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHiyo4_01670	SM00267	diguanylate cyclase
AHiyo4_01750	SM00870	AHiyo4_01750
AHiyo4_01790	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_01820	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AHiyo4_01900	SM00895	AHiyo4_01900
AHiyo4_02030	SM00895	AHiyo4_02030
AHiyo4_02130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_02130	SM00895	AHiyo4_02130
AHiyo4_02240	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHiyo4_02240	SM01012	AHiyo4_02240
AHiyo4_02250	SM01012	AHiyo4_02250
AHiyo4_02270	SM01012	AHiyo4_02270
AHiyo4_02310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_02310	SM00895	AHiyo4_02310
AHiyo4_02420	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_02420	SM00450	Rhodanese Homology Domain
AHiyo4_02450	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_02450	SM00450	Rhodanese Homology Domain
AHiyo4_02510	SM00052	Putative diguanylate phosphodiesterase
AHiyo4_02520	SM00052	Putative diguanylate phosphodiesterase
AHiyo4_02530	SM00267	diguanylate cyclase
AHiyo4_02540	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AHiyo4_02540	SM00387	Histidine kinase-like ATPases
AHiyo4_02540	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_02780	SM00450	Rhodanese Homology Domain
AHiyo4_02810	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AHiyo4_03060	SM00905	Dihydroneopterin aldolase
AHiyo4_03170	SM01012	AHiyo4_03170
AHiyo4_03190	SM01012	AHiyo4_03190
AHiyo4_03360	SM01086	C-terminal, D2-small domain, of ClpB protein
AHiyo4_03400	SM01120	AHiyo4_03400
AHiyo4_03480	SM00525	AHiyo4_03480
AHiyo4_03540	SM00825	Beta-ketoacyl synthase
AHiyo4_03560	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_03620	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_03680	SM01012	AHiyo4_03680
AHiyo4_03780	SM00642	Alpha-amylase domain
AHiyo4_03940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_03940	SM00895	AHiyo4_03940
AHiyo4_04020	SM01006	Siderophore biosynthesis protein domain
AHiyo4_04250	SM00420	helix_turn_helix, Deoxyribose operon repressor
AHiyo4_04250	SM01134	AHiyo4_04250
AHiyo4_04630	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_04670	SM00507	HNH nucleases
AHiyo4_04700	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_04840	SM00091	PAS domain
AHiyo4_04840	SM00387	Histidine kinase-like ATPases
AHiyo4_04850	SM00448	cheY-homologous receiver domain
AHiyo4_04990	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_05090	SM00481	DNA polymerase alpha chain like domain
AHiyo4_05110	SM00640	Glycosyl hydrolases family 32
AHiyo4_05230	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_05320	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_05360	SM00357	Cold shock protein domain
AHiyo4_05370	SM00421	helix_turn_helix, Lux Regulon
AHiyo4_05370	SM00448	cheY-homologous receiver domain
AHiyo4_05400	SM00248	ankyrin repeats
AHiyo4_05480	SM00882	Coenzyme A transferase
AHiyo4_05500	SM00882	Coenzyme A transferase
AHiyo4_05510	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_05530	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_05630	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_05720	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AHiyo4_05840	SM00788	Adenylosuccinate synthetase
AHiyo4_05850	SM00788	Adenylosuccinate synthetase
AHiyo4_05880	SM00881	CoA binding domain
AHiyo4_05980	SM01211	AHiyo4_05980
AHiyo4_06090	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_06130	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_06160	SM00493	AHiyo4_06160
AHiyo4_06190	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_06520	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_06540	SM00387	Histidine kinase-like ATPases
AHiyo4_06660	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_06710	SM00822	AHiyo4_06710
AHiyo4_06810	SM01043	Bacterial transcriptional activator domain
AHiyo4_06860	SM00506	Appr-1"-p processing enzyme
AHiyo4_06880	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_06910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_06970	SM00490	helicase superfamily c-terminal domain
AHiyo4_07020	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_07070	SM00640	Glycosyl hydrolases family 32
AHiyo4_07180	SM00507	HNH nucleases
AHiyo4_07250	SM00014	Acid phosphatase homologues
AHiyo4_07300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHiyo4_07300	SM00387	Histidine kinase-like ATPases
AHiyo4_07300	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_07310	SM00448	cheY-homologous receiver domain
AHiyo4_07310	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_07520	SM00487	DEAD-like helicases superfamily
AHiyo4_07520	SM00490	helicase superfamily c-terminal domain
AHiyo4_07750	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_07770	SM00829	Enoylreductase
AHiyo4_07910	SM00477	DNA/RNA non-specific endonuclease
AHiyo4_07910	SM00892	DNA/RNA non-specific endonuclease
AHiyo4_08010	SM00855	Phosphoglycerate mutase family
AHiyo4_08030	SM00387	Histidine kinase-like ATPases
AHiyo4_08030	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_08040	SM00448	cheY-homologous receiver domain
AHiyo4_08040	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_08070	SM01058	CarD-like/TRCF domain
AHiyo4_08110	SM00840	AHiyo4_08110
AHiyo4_08120	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AHiyo4_08130	SM00642	Alpha-amylase domain
AHiyo4_08210	SM00642	Alpha-amylase domain
AHiyo4_08220	SM00642	Alpha-amylase domain
AHiyo4_08270	SM00642	Alpha-amylase domain
AHiyo4_08300	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_08370	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_08610	SM00986	Uracil DNA glycosylase superfamily
AHiyo4_08610	SM00987	UreE urease accessory protein, C-terminal domain 
AHiyo4_08650	SM00357	Cold shock protein domain
AHiyo4_08710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHiyo4_08710	SM00387	Histidine kinase-like ATPases
AHiyo4_08710	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_08730	SM00448	cheY-homologous receiver domain
AHiyo4_08730	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_08740	SM00487	DEAD-like helicases superfamily
AHiyo4_08740	SM00490	helicase superfamily c-terminal domain
AHiyo4_08790	SM00357	Cold shock protein domain
AHiyo4_08850	SM00529	Helix-turn-helix diphteria tox regulatory element
AHiyo4_08910	SM00507	HNH nucleases
AHiyo4_08950	SM00852	Probable molybdopterin binding domain
AHiyo4_08980	SM00872	Alpha mannosidase, middle domain
AHiyo4_09230	SM00881	CoA binding domain
AHiyo4_09240	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_09270	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_09430	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_09470	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_09560	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_09590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_09680	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_09760	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_09760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_09830	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_09910	SM00387	Histidine kinase-like ATPases
AHiyo4_09910	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_09920	SM00448	cheY-homologous receiver domain
AHiyo4_09920	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_10000	SM00316	Ribosomal protein S1-like RNA-binding domain
AHiyo4_10000	SM00732	Likely ribonuclease with RNase H fold.
AHiyo4_10010	SM00507	HNH nucleases
AHiyo4_10050	SM00257	Lysin motif
AHiyo4_10170	SM00867	YceI-like domain 
AHiyo4_10350	SM00866	AHiyo4_10350
AHiyo4_10510	SM00450	Rhodanese Homology Domain
AHiyo4_10520	SM00849	Metallo-beta-lactamase superfamily
AHiyo4_10530	SM00450	Rhodanese Homology Domain
AHiyo4_10560	SM00450	Rhodanese Homology Domain
AHiyo4_10590	SM00450	Rhodanese Homology Domain
AHiyo4_10820	SM00450	Rhodanese Homology Domain
AHiyo4_10860	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_11050	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_11250	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_11310	SM00344	helix_turn_helix ASNC type
AHiyo4_11630	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_11700	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_11740	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_11940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_12020	SM00267	diguanylate cyclase
AHiyo4_12020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHiyo4_12110	SM00357	Cold shock protein domain
AHiyo4_12160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_12160	SM00895	AHiyo4_12160
AHiyo4_12310	SM01043	Bacterial transcriptional activator domain
AHiyo4_12320	SM00028	Tetratricopeptide repeats
AHiyo4_12350	SM00267	diguanylate cyclase
AHiyo4_12360	SM00448	cheY-homologous receiver domain
AHiyo4_12370	SM00448	cheY-homologous receiver domain
AHiyo4_12380	SM00387	Histidine kinase-like ATPases
AHiyo4_12380	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_12380	SM00448	cheY-homologous receiver domain
AHiyo4_12420	SM00450	Rhodanese Homology Domain
AHiyo4_12420	SM00849	Metallo-beta-lactamase superfamily
AHiyo4_12430	SM00052	Putative diguanylate phosphodiesterase
AHiyo4_12440	SM00052	Putative diguanylate phosphodiesterase
AHiyo4_12440	SM00091	PAS domain
AHiyo4_12440	SM00267	diguanylate cyclase
AHiyo4_12450	SM00984	UDP binding domain
AHiyo4_12610	SM00798	AICARFT/IMPCHase bienzyme
AHiyo4_12610	SM00851	MGS-like domain
AHiyo4_12620	SM00798	AICARFT/IMPCHase bienzyme
AHiyo4_12700	SM00220	Serine/Threonine protein kinases, catalytic domain
AHiyo4_12830	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_12840	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_12900	SM01005	Alanine racemase, C-terminal domain
AHiyo4_13180	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_13210	SM00829	Enoylreductase
AHiyo4_13240	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_13380	SM01193	AHiyo4_13380
AHiyo4_13390	SM01192	AHiyo4_13390
AHiyo4_13530	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_13720	SM00670	Large family of predicted nucleotide-binding domains
AHiyo4_13800	SM00947	Carbonic anhydrase
AHiyo4_13870	SM01001	AIR carboxylase
AHiyo4_14020	SM00996	S-adenosyl-L-homocysteine hydrolase
AHiyo4_14020	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AHiyo4_14150	SM00460	Transglutaminase/protease-like homologues
AHiyo4_14210	SM01208	AHiyo4_14210
AHiyo4_14240	SM00650	Ribosomal RNA adenine dimethylases
AHiyo4_14360	SM01400	AHiyo4_14360
AHiyo4_14430	SM00421	helix_turn_helix, Lux Regulon
AHiyo4_14520	SM00487	DEAD-like helicases superfamily
AHiyo4_14520	SM00490	helicase superfamily c-terminal domain
AHiyo4_14520	SM01058	CarD-like/TRCF domain
AHiyo4_14530	SM00982	AHiyo4_14530
AHiyo4_14570	SM01133	AHiyo4_14570
AHiyo4_14800	SM00878	Biotin carboxylase C-terminal domain
AHiyo4_15050	SM00060	Fibronectin type 3 domain
AHiyo4_15150	SM00331	Sigma factor PP2C-like phosphatases
AHiyo4_15150	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AHiyo4_15180	SM00220	Serine/Threonine protein kinases, catalytic domain
AHiyo4_15210	SM00240	Forkhead associated domain
AHiyo4_15300	SM00532	Ligase N family
AHiyo4_15320	SM00292	breast cancer carboxy-terminal domain
AHiyo4_15370	SM00387	Histidine kinase-like ATPases
AHiyo4_15420	SM00845	GatB domain
AHiyo4_15460	SM00829	Enoylreductase
AHiyo4_15520	SM00420	helix_turn_helix, Deoxyribose operon repressor
AHiyo4_15530	SM01134	AHiyo4_15530
AHiyo4_15540	SM00855	Phosphoglycerate mutase family
AHiyo4_15650	SM00829	Enoylreductase
AHiyo4_15750	SM00363	S4 RNA-binding domain
AHiyo4_15870	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHiyo4_15890	SM00400	zinc finger
AHiyo4_16170	SM00850	LytTr DNA-binding domain
AHiyo4_16180	SM00448	cheY-homologous receiver domain
AHiyo4_16190	SM00387	Histidine kinase-like ATPases
AHiyo4_16240	SM00344	helix_turn_helix ASNC type
AHiyo4_16260	SM00861	Transketolase, pyrimidine binding domain
AHiyo4_16340	SM00878	Biotin carboxylase C-terminal domain
AHiyo4_16360	SM00882	Coenzyme A transferase
AHiyo4_16370	SM00882	Coenzyme A transferase
AHiyo4_16750	SM00316	Ribosomal protein S1-like RNA-binding domain
AHiyo4_16910	SM00904	Riboflavin kinase
AHiyo4_16940	SM01387	AHiyo4_16940
AHiyo4_16960	SM00316	Ribosomal protein S1-like RNA-binding domain
AHiyo4_16960	SM00322	K homology RNA-binding domain
AHiyo4_17020	SM00421	helix_turn_helix, Lux Regulon
AHiyo4_17030	SM00507	HNH nucleases
AHiyo4_17140	SM00852	Probable molybdopterin binding domain
AHiyo4_17160	SM00852	Probable molybdopterin binding domain
AHiyo4_17250	SM01130	AHiyo4_17250
AHiyo4_17300	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_17350	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_17360	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_17370	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_17480	SM00487	DEAD-like helicases superfamily
AHiyo4_17480	SM00491	AHiyo4_17480
AHiyo4_17500	SM00257	Lysin motif
AHiyo4_17640	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AHiyo4_17700	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHiyo4_17760	SM00873	B3/4 domain
AHiyo4_17770	SM00874	tRNA synthetase B5 domain
AHiyo4_17770	SM00896	Ferredoxin-fold anticodon binding domain
AHiyo4_17820	SM00823	Phosphopantetheine attachment site
AHiyo4_17890	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AHiyo4_18020	SM01009	AlkA N-terminal domain
AHiyo4_18030	SM00342	helix_turn_helix, arabinose operon control protein
AHiyo4_18080	SM00363	S4 RNA-binding domain
AHiyo4_18150	SM00363	S4 RNA-binding domain
AHiyo4_18290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_18290	SM00895	AHiyo4_18290
AHiyo4_18350	SM00387	Histidine kinase-like ATPases
AHiyo4_18420	SM00363	S4 RNA-binding domain
AHiyo4_18470	SM00563	Phosphate acyltransferases
AHiyo4_18480	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_18490	SM01232	AHiyo4_18490
AHiyo4_18500	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AHiyo4_18540	SM00240	Forkhead associated domain
AHiyo4_18620	SM00878	Biotin carboxylase C-terminal domain
AHiyo4_18790	SM00740	AHiyo4_18790
AHiyo4_18800	SM00220	Serine/Threonine protein kinases, catalytic domain
AHiyo4_18820	SM00257	Lysin motif
AHiyo4_19090	SM00864	Tubulin/FtsZ family, GTPase domain
AHiyo4_19090	SM00865	Tubulin/FtsZ family, C-terminal domain
AHiyo4_19180	SM00481	DNA polymerase alpha chain like domain
AHiyo4_19210	SM00903	Flavin reductase like domain
AHiyo4_19300	SM01230	AHiyo4_19300
AHiyo4_19370	SM01230	AHiyo4_19370
AHiyo4_19700	SM00387	Histidine kinase-like ATPases
AHiyo4_19700	SM00433	TopoisomeraseII
AHiyo4_19710	SM00433	TopoisomeraseII
AHiyo4_19790	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_19850	SM00434	DNA Topoisomerase IV
AHiyo4_19860	SM00434	DNA Topoisomerase IV
AHiyo4_20150	SM00861	Transketolase, pyrimidine binding domain
AHiyo4_20260	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_20330	SM00341	Helicase and RNase D C-terminal
AHiyo4_20330	SM00474	3'-5' exonuclease
AHiyo4_20470	SM00450	Rhodanese Homology Domain
AHiyo4_20480	SM00450	Rhodanese Homology Domain
AHiyo4_20940	SM00448	cheY-homologous receiver domain
AHiyo4_20940	SM01012	AHiyo4_20940
AHiyo4_21410	SM00910	AHiyo4_21410
AHiyo4_21520	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_21620	SM00876	Biotin and Thiamin Synthesis associated domain
AHiyo4_21640	SM00829	Enoylreductase
AHiyo4_21760	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_21770	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_22100	SM00895	AHiyo4_22100
AHiyo4_22220	SM00855	Phosphoglycerate mutase family
AHiyo4_22250	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AHiyo4_22250	SM00475	5'-3' exonuclease
AHiyo4_22510	SM00448	cheY-homologous receiver domain
AHiyo4_22610	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AHiyo4_22610	SM00475	5'-3' exonuclease
AHiyo4_22640	SM00482	DNA polymerase A domain
AHiyo4_22680	SM00316	Ribosomal protein S1-like RNA-binding domain
AHiyo4_22730	SM00487	DEAD-like helicases superfamily
AHiyo4_22740	SM00490	helicase superfamily c-terminal domain
AHiyo4_22850	SM00490	helicase superfamily c-terminal domain
AHiyo4_22900	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_22920	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_22940	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_22960	SM00563	Phosphate acyltransferases
AHiyo4_22970	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AHiyo4_23040	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AHiyo4_23150	SM00861	Transketolase, pyrimidine binding domain
AHiyo4_23220	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_23390	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_23410	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_23470	SM00822	AHiyo4_23470
AHiyo4_23520	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_23620	SM00903	Flavin reductase like domain
AHiyo4_23740	SM00460	Transglutaminase/protease-like homologues
AHiyo4_23880	SM00822	AHiyo4_23880
AHiyo4_24140	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_24300	SM00487	DEAD-like helicases superfamily
AHiyo4_24310	SM01142	AHiyo4_24310
AHiyo4_24370	SM00244	prohibitin homologues
AHiyo4_24740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_24900	SM00917	LeuA allosteric (dimerisation) domain
AHiyo4_24960	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHiyo4_24960	SM01091	Transporter associated domain
AHiyo4_25130	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHiyo4_25150	SM00838	Elongation factor G C-terminus
AHiyo4_25250	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AHiyo4_25510	SM01409	AHiyo4_25510
AHiyo4_25520	SM00072	Guanylate kinase homologues.
AHiyo4_25560	SM00851	MGS-like domain
AHiyo4_25560	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AHiyo4_25570	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AHiyo4_25600	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AHiyo4_25770	SM00841	Elongation factor P, C-terminal
AHiyo4_25770	SM01185	AHiyo4_25770
AHiyo4_25890	SM00732	Likely ribonuclease with RNase H fold.
AHiyo4_25900	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AHiyo4_25970	SM00363	S4 RNA-binding domain
AHiyo4_25970	SM01390	AHiyo4_25970
AHiyo4_26160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AHiyo4_26160	SM00954	Region found in RelA / SpoT proteins
AHiyo4_26190	SM01323	AHiyo4_26190
AHiyo4_26200	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_26210	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AHiyo4_26350	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AHiyo4_26760	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_26780	SM01012	AHiyo4_26780
AHiyo4_27100	SM00419	helix_turn_helix, cAMP Regulatory protein
AHiyo4_27190	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_27310	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_27390	SM00857	Resolvase, N terminal domain
AHiyo4_27420	SM00857	Resolvase, N terminal domain
AHiyo4_27460	SM00849	Metallo-beta-lactamase superfamily
AHiyo4_27470	SM00855	Phosphoglycerate mutase family
AHiyo4_27740	SM00327	von Willebrand factor (vWF) type A domain
AHiyo4_28000	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AHiyo4_28090	SM00316	Ribosomal protein S1-like RNA-binding domain
AHiyo4_28110	SM00756	AHiyo4_28110
AHiyo4_28120	SM00562	AHiyo4_28120
AHiyo4_28270	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_28270	SM00994	ClpX C4-type zinc finger
AHiyo4_28270	SM01086	C-terminal, D2-small domain, of ClpB protein
AHiyo4_28320	SM01232	AHiyo4_28320
AHiyo4_28460	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_28540	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_28590	SM00479	AHiyo4_28590
AHiyo4_28640	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AHiyo4_28730	SM01350	AHiyo4_28730
AHiyo4_28740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_28870	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_28970	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AHiyo4_29250	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_29250	SM00962	SRP54-type protein, GTPase domain
AHiyo4_29250	SM00963	SRP54-type protein, helical bundle domain
AHiyo4_29280	SM00938	Nitrogen regulatory protein P-II
AHiyo4_29340	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_29340	SM00962	SRP54-type protein, GTPase domain
AHiyo4_29340	SM00963	SRP54-type protein, helical bundle domain
AHiyo4_29400	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AHiyo4_29400	SM01232	AHiyo4_29400
AHiyo4_29410	SM00358	Double-stranded RNA binding motif
AHiyo4_29490	SM00490	helicase superfamily c-terminal domain
AHiyo4_29500	SM00487	DEAD-like helicases superfamily
AHiyo4_29650	SM00563	Phosphate acyltransferases
AHiyo4_29700	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_29850	SM00849	Metallo-beta-lactamase superfamily
AHiyo4_29900	SM01329	AHiyo4_29900
AHiyo4_29950	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_30130	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_30150	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AHiyo4_30230	SM00460	Transglutaminase/protease-like homologues
AHiyo4_30440	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_30570	SM00479	AHiyo4_30570
AHiyo4_30720	SM00487	DEAD-like helicases superfamily
AHiyo4_30790	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_30910	SM00357	Cold shock protein domain
AHiyo4_31160	SM00937	AHiyo4_31160
AHiyo4_31180	SM00357	Cold shock protein domain
AHiyo4_31290	SM00836	DALR anticodon binding domain
AHiyo4_31290	SM01016	Arginyl tRNA synthetase N terminal dom
AHiyo4_31350	SM00507	HNH nucleases
AHiyo4_31400	SM00487	DEAD-like helicases superfamily
AHiyo4_31500	SM00450	Rhodanese Homology Domain
AHiyo4_31570	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_31620	SM01091	Transporter associated domain
AHiyo4_31660	SM00861	Transketolase, pyrimidine binding domain
AHiyo4_31840	SM00529	Helix-turn-helix diphteria tox regulatory element
AHiyo4_31840	SM00899	AHiyo4_31840
AHiyo4_31900	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AHiyo4_31950	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_31960	SM00937	AHiyo4_31960
AHiyo4_32030	SM00641	Glycosyl hydrolases family 25
AHiyo4_32330	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_32380	SM00240	Forkhead associated domain
AHiyo4_32440	SM00387	Histidine kinase-like ATPases
AHiyo4_32580	SM00957	SecA DEAD-like domain
AHiyo4_32580	SM00958	SecA preprotein cross-linking domain
AHiyo4_32620	SM00909	Sporulation and spore germination
AHiyo4_32640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AHiyo4_32640	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_32670	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_32680	SM00448	cheY-homologous receiver domain
AHiyo4_32790	SM00830	Chorismate mutase type II
AHiyo4_32800	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_32970	SM00271	DnaJ molecular chaperone homology domain
AHiyo4_33020	SM00893	Electron transfer flavoprotein domain
AHiyo4_33030	SM00893	Electron transfer flavoprotein domain
AHiyo4_33040	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AHiyo4_33200	SM00341	Helicase and RNase D C-terminal
AHiyo4_33350	SM00479	AHiyo4_33350
AHiyo4_33360	SM00062	Bacterial periplasmic substrate-binding proteins
AHiyo4_33390	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_33420	SM01004	Delta-aminolevulinic acid dehydratase
AHiyo4_33570	SM00450	Rhodanese Homology Domain
AHiyo4_33680	SM00955	AHiyo4_33680
AHiyo4_33700	SM00487	DEAD-like helicases superfamily
AHiyo4_33700	SM00490	helicase superfamily c-terminal domain
AHiyo4_33840	SM00924	MgtE intracellular N domain
AHiyo4_33970	SM00062	Bacterial periplasmic substrate-binding proteins
AHiyo4_34180	SM00838	Elongation factor G C-terminus
AHiyo4_34210	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_34540	SM00344	helix_turn_helix ASNC type
AHiyo4_34560	SM00344	helix_turn_helix ASNC type
AHiyo4_34600	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_34670	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_34680	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_35070	SM00834	Putative regulatory protein
AHiyo4_35080	SM00858	AHiyo4_35080
AHiyo4_35180	SM01240	AHiyo4_35180
AHiyo4_35230	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_35240	SM01240	AHiyo4_35240
AHiyo4_35260	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHiyo4_35260	SM01240	AHiyo4_35260
AHiyo4_35330	SM00421	helix_turn_helix, Lux Regulon
AHiyo4_35390	SM00883	Chaperonin 10 Kd subunit
AHiyo4_35520	SM01005	Alanine racemase, C-terminal domain
AHiyo4_35760	SM00642	Alpha-amylase domain
AHiyo4_35770	SM00642	Alpha-amylase domain
AHiyo4_35830	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_36150	SM00858	AHiyo4_36150
AHiyo4_36210	SM00448	cheY-homologous receiver domain
AHiyo4_36210	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_36230	SM00387	Histidine kinase-like ATPases
AHiyo4_36230	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_36270	SM00662	RNA polymerases D
AHiyo4_36470	SM01374	AHiyo4_36470
AHiyo4_36510	SM00322	K homology RNA-binding domain
AHiyo4_36540	SM01382	AHiyo4_36540
AHiyo4_36540	SM01383	AHiyo4_36540
AHiyo4_36580	SM01403	AHiyo4_36580
AHiyo4_36670	SM00838	Elongation factor G C-terminus
AHiyo4_36670	SM00889	Elongation factor G, domain IV
AHiyo4_36730	SM00663	RNA polymerase I subunit A N-terminus
AHiyo4_36860	SM00649	Ribosomal protein L11/L12
AHiyo4_36870	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AHiyo4_36910	SM00421	helix_turn_helix, Lux Regulon
AHiyo4_36920	SM00448	cheY-homologous receiver domain
AHiyo4_37060	SM00248	ankyrin repeats
AHiyo4_37150	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_37250	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AHiyo4_37360	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_37440	SM00226	Low molecular weight phosphatase family
AHiyo4_37450	SM00226	Low molecular weight phosphatase family
AHiyo4_37480	SM00226	Low molecular weight phosphatase family
AHiyo4_37500	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_37530	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_37560	SM00642	Alpha-amylase domain
AHiyo4_37690	SM00487	DEAD-like helicases superfamily
AHiyo4_37690	SM00490	helicase superfamily c-terminal domain
AHiyo4_37830	SM01038	Beta galactosidase small chain
AHiyo4_37900	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHiyo4_37930	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_38040	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_38100	SM00116	Domain in cystathionine beta-synthase and other proteins.
AHiyo4_38250	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_38390	SM01060	AHiyo4_38390
AHiyo4_38620	SM00880	AHiyo4_38620
AHiyo4_38650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_38650	SM00895	AHiyo4_38650
AHiyo4_38770	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_38900	SM00860	SMI1 / KNR4 family
AHiyo4_39010	SM00062	Bacterial periplasmic substrate-binding proteins
AHiyo4_39060	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_39100	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_39250	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_39310	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_39390	SM00014	Acid phosphatase homologues
AHiyo4_39470	SM01217	AHiyo4_39470
AHiyo4_39680	SM00052	Putative diguanylate phosphodiesterase
AHiyo4_39680	SM00267	diguanylate cyclase
AHiyo4_39740	SM00849	Metallo-beta-lactamase superfamily
AHiyo4_39750	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHiyo4_39750	SM00091	PAS domain
AHiyo4_39760	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHiyo4_39760	SM00091	PAS domain
AHiyo4_39760	SM00387	Histidine kinase-like ATPases
AHiyo4_39760	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_39760	SM00448	cheY-homologous receiver domain
AHiyo4_39770	SM00448	cheY-homologous receiver domain
AHiyo4_39790	SM00267	diguanylate cyclase
AHiyo4_39790	SM00448	cheY-homologous receiver domain
AHiyo4_39800	SM00448	cheY-homologous receiver domain
AHiyo4_39810	SM00567	E-Z type HEAT repeats
AHiyo4_39950	SM00861	Transketolase, pyrimidine binding domain
AHiyo4_39990	SM00344	helix_turn_helix ASNC type
AHiyo4_40210	SM00984	UDP binding domain
AHiyo4_40450	SM00342	helix_turn_helix, arabinose operon control protein
AHiyo4_40560	SM01012	AHiyo4_40560
AHiyo4_40590	SM01012	AHiyo4_40590
AHiyo4_40630	SM00729	Elongator protein 3, MiaB family, Radical SAM
AHiyo4_40820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_40850	SM00226	Low molecular weight phosphatase family
AHiyo4_41280	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_41290	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_41330	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_41480	SM00421	helix_turn_helix, Lux Regulon
AHiyo4_41560	SM00855	Phosphoglycerate mutase family
AHiyo4_41570	SM00867	YceI-like domain 
AHiyo4_41600	SM00881	CoA binding domain
AHiyo4_41860	SM01043	Bacterial transcriptional activator domain
AHiyo4_41910	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_41920	SM00895	AHiyo4_41920
AHiyo4_41930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_42000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_42140	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AHiyo4_42140	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AHiyo4_42150	SM00493	AHiyo4_42150
AHiyo4_42220	SM00450	Rhodanese Homology Domain
AHiyo4_42250	SM00487	DEAD-like helicases superfamily
AHiyo4_42250	SM00490	helicase superfamily c-terminal domain
AHiyo4_42420	SM00478	endonuclease III
AHiyo4_42420	SM00525	AHiyo4_42420
AHiyo4_42520	SM00420	helix_turn_helix, Deoxyribose operon repressor
AHiyo4_42520	SM01134	AHiyo4_42520
AHiyo4_42540	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_42670	SM00100	Cyclic nucleotide-monophosphate binding domain
AHiyo4_42770	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_42800	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_42860	SM01209	AHiyo4_42860
AHiyo4_42860	SM01210	AHiyo4_42860
AHiyo4_43030	SM00271	DnaJ molecular chaperone homology domain
AHiyo4_43130	SM00822	AHiyo4_43130
AHiyo4_43160	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_43180	SM00895	AHiyo4_43180
AHiyo4_43270	SM01012	AHiyo4_43270
AHiyo4_43280	SM00448	cheY-homologous receiver domain
AHiyo4_43490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_43490	SM00895	AHiyo4_43490
AHiyo4_43650	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AHiyo4_43770	SM00507	HNH nucleases
AHiyo4_43800	SM00095	Transthyretin
AHiyo4_43820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_43820	SM00895	AHiyo4_43820
AHiyo4_43980	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AHiyo4_44110	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_44120	SM00919	Malic enzyme, NAD binding domain
AHiyo4_44120	SM01274	AHiyo4_44120
AHiyo4_44160	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_44210	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_44220	SM01057	Eukaryotic-type carbonic anhydrase
AHiyo4_44420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_44420	SM00895	AHiyo4_44420
AHiyo4_44470	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_44490	SM01119	AHiyo4_44490
AHiyo4_44510	SM00829	Enoylreductase
AHiyo4_44560	SM00342	helix_turn_helix, arabinose operon control protein
AHiyo4_44590	SM00899	AHiyo4_44590
AHiyo4_44700	SM00829	Enoylreductase
AHiyo4_44800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_44800	SM00866	AHiyo4_44800
AHiyo4_44810	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_44850	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_45140	SM00895	AHiyo4_45140
AHiyo4_45150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_45190	SM01230	AHiyo4_45190
AHiyo4_45300	SM00387	Histidine kinase-like ATPases
AHiyo4_45300	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_45300	SM00448	cheY-homologous receiver domain
AHiyo4_45320	SM01230	AHiyo4_45320
AHiyo4_45360	SM00813	Alpha-L-arabinofuranosidase C-terminus
AHiyo4_45490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_45490	SM00895	AHiyo4_45490
AHiyo4_45610	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_45740	SM00507	HNH nucleases
AHiyo4_45820	SM01018	B12 binding domain
AHiyo4_46080	SM00387	Histidine kinase-like ATPases
AHiyo4_46360	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_46370	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_46700	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_46720	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_46790	SM00387	Histidine kinase-like ATPases
AHiyo4_46920	SM00331	Sigma factor PP2C-like phosphatases
AHiyo4_46920	SM00448	cheY-homologous receiver domain
AHiyo4_47090	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_47090	SM01086	C-terminal, D2-small domain, of ClpB protein
AHiyo4_47340	SM00849	Metallo-beta-lactamase superfamily
AHiyo4_47350	SM00490	helicase superfamily c-terminal domain
AHiyo4_47600	SM00487	DEAD-like helicases superfamily
AHiyo4_47600	SM00490	helicase superfamily c-terminal domain
AHiyo4_47640	SM00507	HNH nucleases
AHiyo4_47680	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AHiyo4_47750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_47750	SM00866	AHiyo4_47750
AHiyo4_47850	SM00422	helix_turn_helix, mercury resistance
AHiyo4_47860	SM00271	DnaJ molecular chaperone homology domain
AHiyo4_48050	SM00155	Phospholipase D. Active site motifs.
AHiyo4_48150	SM00450	Rhodanese Homology Domain
AHiyo4_48230	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_48260	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_48460	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AHiyo4_48460	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AHiyo4_48730	SM00354	helix_turn _helix lactose operon repressor
AHiyo4_48930	SM00411	bacterial (prokaryotic) histone like domain
AHiyo4_49020	SM00347	helix_turn_helix multiple antibiotic resistance protein
AHiyo4_49040	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_49110	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_49370	SM01120	AHiyo4_49370
AHiyo4_49380	SM00861	Transketolase, pyrimidine binding domain
AHiyo4_49420	SM00448	cheY-homologous receiver domain
AHiyo4_49420	SM00862	Transcriptional regulatory protein, C terminal
AHiyo4_49440	SM00388	His Kinase A (phosphoacceptor) domain
AHiyo4_49510	SM00530	Helix-turn-helix XRE-family like proteins 
AHiyo4_49540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AHiyo4_49540	SM00895	AHiyo4_49540
AHiyo4_49590	SM00387	Histidine kinase-like ATPases
AHiyo4_49590	SM00448	cheY-homologous receiver domain
AHiyo4_49600	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AHiyo4_49600	SM00091	PAS domain
AHiyo4_49620	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_49660	SM00344	helix_turn_helix ASNC type
AHiyo4_49720	SM00344	helix_turn_helix ASNC type
AHiyo4_49770	SM00919	Malic enzyme, NAD binding domain
AHiyo4_49770	SM01274	AHiyo4_49770
AHiyo4_49970	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AHiyo4_49980	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AHiyo4_49990	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AHiyo4_50050	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_50060	SM00382	ATPases associated with a variety of cellular activities
AHiyo4_50210	SM00861	Transketolase, pyrimidine binding domain
AHiyo4_50290	SM00855	Phosphoglycerate mutase family
AHiyo4_50410	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AHiyo4_50410	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AHiyo4_50420	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_50450	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_50460	SM00882	Coenzyme A transferase
AHiyo4_50480	SM00882	Coenzyme A transferase
AHiyo4_50530	SM00998	Adenylosuccinate lyase C-terminus
AHiyo4_50610	SM00346	helix_turn_helix isocitrate lyase regulation
AHiyo4_51160	SM00421	helix_turn_helix, Lux Regulon
