locus-tag class description UM93_00020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UM93_00020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UM93_00025 PF07730 Histidine kinase UM93_00030 PF00196 Bacterial regulatory proteins, luxR family UM93_00030 PF00072 Response regulator receiver domain UM93_00035 PF18339 RapA N-terminal Tudor like domain 1 UM93_00035 PF18337 RapA N-terminal Tudor like domain UM93_00035 PF00271 Helicase conserved C-terminal domain UM93_00035 PF12137 RNA polymerase recycling family C-terminal UM93_00035 PF00176 SNF2 family N-terminal domain UM93_00040 PF07669 Eco57I restriction-modification methylase UM93_00085 PF00440 Bacterial regulatory proteins, tetR family UM93_00090 PF03176 MMPL family UM93_00105 PF04542 Sigma-70 region 2 UM93_00105 PF08281 Sigma-70, region 4 UM93_00120 PF00005 ABC transporter UM93_00130 PF01061 ABC-2 type transporter UM93_00150 PF01820 D-ala D-ala ligase N-terminus UM93_00150 PF07478 D-ala D-ala ligase C-terminus UM93_00165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UM93_00165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UM93_00165 PF01842 ACT domain UM93_00185 PF00285 Citrate synthase, C-terminal domain UM93_00190 PF00975 Thioesterase domain UM93_00190 PF00550 Phosphopantetheine attachment site UM93_00190 PF13193 AMP-binding enzyme C-terminal domain UM93_00190 PF00668 Condensation domain UM93_00190 PF00501 AMP-binding enzyme UM93_00205 PF00196 Bacterial regulatory proteins, luxR family UM93_00205 PF00072 Response regulator receiver domain UM93_00235 PF00579 tRNA synthetases class I (W and Y) UM93_00260 PF13085 2Fe-2S iron-sulfur cluster binding domain UM93_00265 PF02910 Fumarate reductase flavoprotein C-term UM93_00265 PF00890 FAD binding domain UM93_00275 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UM93_00280 PF01050 Mannose-6-phosphate isomerase UM93_00280 PF00483 Nucleotidyl transferase UM93_00285 PF01546 Peptidase family M20/M25/M40 UM93_00285 PF04107 Glutamate-cysteine ligase family 2(GCS2) UM93_00290 PF01047 MarR family UM93_00295 PF02566 OsmC-like protein UM93_00300 PF00107 Zinc-binding dehydrogenase UM93_00300 PF16884 N-terminal domain of oxidoreductase UM93_00305 PF00296 Luciferase-like monooxygenase UM93_00330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UM93_00335 PF02885 Glycosyl transferase family, helical bundle domain UM93_00335 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain UM93_00335 PF00591 Glycosyl transferase family, a/b domain UM93_00355 PF00962 Adenosine/AMP deaminase UM93_00360 PF03819 MazG nucleotide pyrophosphohydrolase domain UM93_00375 PF00113 Enolase, C-terminal TIM barrel domain UM93_00375 PF03952 Enolase, N-terminal domain UM93_00390 PF02541 Ppx/GppA phosphatase family UM93_00400 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_00400 PF18113 Rubredoxin binding C-terminal domain UM93_00415 PF00376 MerR family regulatory protein UM93_00415 PF09278 MerR, DNA binding UM93_00430 PF10509 Galactokinase galactose-binding signature UM93_00430 PF08544 GHMP kinases C terminal UM93_00430 PF00288 GHMP kinases N terminal domain UM93_00435 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain UM93_00435 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain UM93_00445 PF00291 Pyridoxal-phosphate dependent enzyme UM93_00445 PF13291 ACT domain UM93_00450 PF01272 Transcription elongation factor, GreA/GreB, C-term UM93_00450 PF03449 Transcription elongation factor, N-terminal UM93_00460 PF02585 GlcNAc-PI de-N-acetylase UM93_00470 PF03006 Haemolysin-III related UM93_00475 PF01255 Putative undecaprenyl diphosphate synthase UM93_00480 PF13638 PIN domain UM93_00480 PF02562 PhoH-like protein UM93_00500 PF07690 Major Facilitator Superfamily UM93_00510 PF10415 Fumarase C C-terminus UM93_00510 PF00206 Lyase UM93_00515 PF00484 Carbonic anhydrase UM93_00525 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded UM93_00545 PF01238 Phosphomannose isomerase type I UM93_00550 PF03816 Cell envelope-related transcriptional attenuator domain UM93_00555 PF00731 AIR carboxylase UM93_00560 PF02222 ATP-grasp domain UM93_00560 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain UM93_00575 PF02467 Transcription factor WhiB UM93_00605 PF05221 S-adenosyl-L-homocysteine hydrolase UM93_00605 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain UM93_00610 PF17964 Bacterial Ig domain UM93_00610 PF03734 L,D-transpeptidase catalytic domain UM93_00630 PF00501 AMP-binding enzyme UM93_00640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UM93_00645 PF00171 Aldehyde dehydrogenase family UM93_00660 PF07726 ATPase family associated with various cellular activities (AAA) UM93_00660 PF17863 AAA lid domain UM93_00665 PF01026 TatD related DNase UM93_00670 PF03990 G5-linked-Ubiquitin-like domain UM93_00670 PF07501 G5 domain UM93_00670 PF06737 Transglycosylase-like domain UM93_00675 PF00398 Ribosomal RNA adenine dimethylase UM93_00680 PF08544 GHMP kinases C terminal UM93_00680 PF00288 GHMP kinases N terminal domain UM93_00685 PF12848 ABC transporter UM93_00685 PF00005 ABC transporter UM93_00685 PF16326 ABC transporter C-terminal domain UM93_00695 PF12804 MobA-like NTP transferase domain UM93_00695 PF00132 Bacterial transferase hexapeptide (six repeats) UM93_00700 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UM93_00700 PF14572 Phosphoribosyl synthetase-associated domain UM93_00705 PF01386 Ribosomal L25p family UM93_00705 PF14693 Ribosomal protein TL5, C-terminal domain UM93_00710 PF01195 Peptidyl-tRNA hydrolase UM93_00720 PF00266 Aminotransferase class-V UM93_00725 PF01592 NifU-like N terminal domain UM93_00735 PF00171 Aldehyde dehydrogenase family UM93_00740 PF00202 Aminotransferase class-III UM93_00775 PF06965 Na+/H+ antiporter 1 UM93_00790 PF02559 CarD-like/TRCF domain UM93_00790 PF00270 DEAD/DEAH box helicase UM93_00790 PF17757 UvrB interaction domain UM93_00790 PF00271 Helicase conserved C-terminal domain UM93_00790 PF03461 TRCF domain UM93_00795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UM93_00795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UM93_00805 PF00083 Sugar (and other) transporter UM93_00815 PF01791 DeoC/LacD family aldolase UM93_00820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UM93_00820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UM93_00820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UM93_00820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UM93_00825 PF01048 Phosphorylase superfamily UM93_00830 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_00830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UM93_00835 PF00083 Sugar (and other) transporter UM93_00835 PF07690 Major Facilitator Superfamily UM93_00840 PF02785 Biotin carboxylase C-terminal domain UM93_00840 PF00289 Biotin carboxylase, N-terminal domain UM93_00840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UM93_00840 PF00364 Biotin-requiring enzyme UM93_00850 PF00171 Aldehyde dehydrogenase family UM93_00860 PF02545 Maf-like protein UM93_00865 PF01906 Putative heavy-metal-binding UM93_00880 PF01039 Carboxyl transferase domain UM93_00890 PF03099 Biotin/lipoate A/B protein ligase family UM93_00890 PF02237 Biotin protein ligase C terminal domain UM93_00890 PF08279 HTH domain UM93_00900 PF16701 Adenylate cyclase regulatory domain UM93_00900 PF00211 Adenylate and Guanylate cyclase catalytic domain UM93_00910 PF17863 AAA lid domain UM93_00910 PF07726 ATPase family associated with various cellular activities (AAA) UM93_00960 PF12538 DNA transporter UM93_00960 PF01580 FtsK/SpoIIIE family UM93_00980 PF00459 Inositol monophosphatase family UM93_01010 PF00733 Asparagine synthase UM93_01010 PF13537 Glutamine amidotransferase domain UM93_01020 PF03129 Anticodon binding domain UM93_01020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UM93_01035 PF03466 LysR substrate binding domain UM93_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_01070 PF01553 Acyltransferase UM93_01100 PF00005 ABC transporter UM93_01115 PF00072 Response regulator receiver domain UM93_01115 PF00196 Bacterial regulatory proteins, luxR family UM93_01120 PF01207 Dihydrouridine synthase (Dus) UM93_01125 PF13286 Phosphohydrolase-associated domain UM93_01125 PF01966 HD domain UM93_01135 PF08278 DNA primase DnaG DnaB-binding UM93_01135 PF13662 Toprim domain UM93_01135 PF10410 DnaB-helicase binding domain of primase UM93_01135 PF01807 CHC2 zinc finger UM93_01135 PF08275 DNA primase catalytic core, N-terminal domain UM93_01145 PF12697 Alpha/beta hydrolase family UM93_01150 PF00089 Trypsin UM93_01170 PF09924 Uncharacterised conserved protein (DUF2156) UM93_01190 PF00534 Glycosyl transferases group 1 UM93_01190 PF13439 Glycosyltransferase Family 4 UM93_01245 PF02770 Acyl-CoA dehydrogenase, middle domain UM93_01245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UM93_01245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UM93_01255 PF00318 Ribosomal protein S2 UM93_01260 PF00889 Elongation factor TS UM93_01265 PF02567 Phenazine biosynthesis-like protein UM93_01275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_01275 PF03466 LysR substrate binding domain UM93_01290 PF00696 Amino acid kinase family UM93_01295 PF01765 Ribosome recycling factor UM93_01310 PF00474 Sodium:solute symporter family UM93_01320 PF04397 LytTr DNA-binding domain UM93_01320 PF00072 Response regulator receiver domain UM93_01325 PF13492 GAF domain UM93_01325 PF07694 5TMR of 5TMR-LYT UM93_01325 PF06580 Histidine kinase UM93_01325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_01335 PF00474 Sodium:solute symporter family UM93_01355 PF00676 Dehydrogenase E1 component UM93_01360 PF02780 Transketolase, C-terminal domain UM93_01360 PF02779 Transketolase, pyrimidine binding domain UM93_01365 PF00364 Biotin-requiring enzyme UM93_01365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UM93_01365 PF02817 e3 binding domain UM93_01370 PF00440 Bacterial regulatory proteins, tetR family UM93_01375 PF01039 Carboxyl transferase domain UM93_01380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UM93_01380 PF00364 Biotin-requiring enzyme UM93_01380 PF00289 Biotin carboxylase, N-terminal domain UM93_01380 PF02785 Biotin carboxylase C-terminal domain UM93_01385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UM93_01385 PF02770 Acyl-CoA dehydrogenase, middle domain UM93_01385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UM93_01390 PF01144 Coenzyme A transferase UM93_01395 PF01144 Coenzyme A transferase UM93_01405 PF03328 HpcH/HpaI aldolase/citrate lyase family UM93_01415 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UM93_01415 PF13288 DXP reductoisomerase C-terminal domain UM93_01415 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UM93_01420 PF17820 PDZ domain UM93_01420 PF02163 Peptidase family M50 UM93_01440 PF04551 GcpE protein UM93_01450 PF12697 Alpha/beta hydrolase family UM93_01475 PF00005 ABC transporter UM93_01485 PF04073 Aminoacyl-tRNA editing domain UM93_01485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UM93_01485 PF03129 Anticodon binding domain UM93_01490 PF01925 Sulfite exporter TauE/SafE UM93_01510 PF08529 NusA N-terminal domain UM93_01510 PF13184 NusA-like KH domain UM93_01520 PF04760 Translation initiation factor IF-2, N-terminal region UM93_01520 PF11987 Translation-initiation factor 2 UM93_01520 PF00009 Elongation factor Tu GTP binding domain UM93_01525 PF02033 Ribosome-binding factor A UM93_01535 PF01509 TruB family pseudouridylate synthase (N terminal domain) UM93_01535 PF16198 tRNA pseudouridylate synthase B C-terminal domain UM93_01535 PF09142 tRNA Pseudouridine synthase II, C terminal UM93_01555 PF00056 lactate/malate dehydrogenase, NAD binding domain UM93_01555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UM93_01565 PF01687 Riboflavin kinase UM93_01565 PF06574 FAD synthetase UM93_01570 PF08240 Alcohol dehydrogenase GroES-like domain UM93_01570 PF00107 Zinc-binding dehydrogenase UM93_01575 PF12833 Helix-turn-helix domain UM93_01575 PF01965 DJ-1/PfpI family UM93_01580 PF00312 Ribosomal protein S15 UM93_01585 PF00013 KH domain UM93_01585 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UM93_01585 PF01138 3' exoribonuclease family, domain 1 UM93_01585 PF00575 S1 RNA binding domain UM93_01590 PF05193 Peptidase M16 inactive domain UM93_01590 PF00675 Insulinase (Peptidase family M16) UM93_01610 PF06463 Molybdenum Cofactor Synthesis C UM93_01610 PF04055 Radical SAM superfamily UM93_01620 PF00528 Binding-protein-dependent transport system inner membrane component UM93_01650 PF00535 Glycosyl transferase family 2 UM93_01660 PF00512 His Kinase A (phospho-acceptor) domain UM93_01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_01665 PF00174 Oxidoreductase molybdopterin binding domain UM93_01670 PF01370 NAD dependent epimerase/dehydratase family UM93_01675 PF01048 Phosphorylase superfamily UM93_01680 PF00994 Probable molybdopterin binding domain UM93_01680 PF03453 MoeA N-terminal region (domain I and II) UM93_01680 PF03454 MoeA C-terminal region (domain IV) UM93_01685 PF01967 MoaC family UM93_01690 PF00994 Probable molybdopterin binding domain UM93_01695 PF02391 MoaE protein UM93_01705 PF01113 Dihydrodipicolinate reductase, N-terminus UM93_01705 PF05173 Dihydrodipicolinate reductase, C-terminus UM93_01715 PF00561 alpha/beta hydrolase fold UM93_01720 PF00701 Dihydrodipicolinate synthetase family UM93_01725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UM93_01725 PF17770 Ribonuclease J C-terminal domain UM93_01725 PF12706 Beta-lactamase superfamily domain UM93_01730 PF06441 Epoxide hydrolase N terminus UM93_01750 PF00528 Binding-protein-dependent transport system inner membrane component UM93_01760 PF00356 Bacterial regulatory proteins, lacI family UM93_01775 PF00528 Binding-protein-dependent transport system inner membrane component UM93_01780 PF00528 Binding-protein-dependent transport system inner membrane component UM93_01795 PF09397 Ftsk gamma domain UM93_01795 PF01580 FtsK/SpoIIIE family UM93_01795 PF17854 FtsK alpha domain UM93_01805 PF02464 Competence-damaged protein UM93_01805 PF00994 Probable molybdopterin binding domain UM93_01805 PF18146 Damage-inducible protein CinA KH domain UM93_01825 PF00154 recA bacterial DNA recombination protein UM93_01830 PF02631 RecX family UM93_01840 PF04055 Radical SAM superfamily UM93_01840 PF00919 Uncharacterized protein family UPF0004 UM93_01850 PF01678 Diaminopimelate epimerase UM93_01855 PF00324 Amino acid permease UM93_01860 PF05175 Methyltransferase small domain UM93_01875 PF16360 GTP-binding GTPase Middle Region UM93_01875 PF01926 50S ribosome-binding GTPase UM93_01875 PF13167 GTP-binding GTPase N-terminal UM93_01880 PF13307 Helicase C-terminal domain UM93_01885 PF00717 Peptidase S24-like UM93_01885 PF01726 LexA DNA binding domain UM93_01895 PF00155 Aminotransferase class I and II UM93_01900 PF00475 Imidazoleglycerol-phosphate dehydratase UM93_01910 PF00977 Histidine biosynthesis protein UM93_01930 PF13305 Tetracyclin repressor-like, C-terminal domain UM93_01930 PF00440 Bacterial regulatory proteins, tetR family UM93_01940 PF05198 Translation initiation factor IF-3, N-terminal domain UM93_01940 PF00707 Translation initiation factor IF-3, C-terminal domain UM93_01945 PF01632 Ribosomal protein L35 UM93_01950 PF00453 Ribosomal protein L20 UM93_01955 PF00588 SpoU rRNA Methylase family UM93_01955 PF08032 RNA 2'-O ribose methyltransferase substrate binding UM93_01970 PF07690 Major Facilitator Superfamily UM93_01975 PF00293 NUDIX domain UM93_01985 PF17227 Family of unknown function (DUF5302) UM93_01995 PF13193 AMP-binding enzyme C-terminal domain UM93_01995 PF00501 AMP-binding enzyme UM93_02010 PF01409 tRNA synthetases class II core domain (F) UM93_02010 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UM93_02015 PF03483 B3/4 domain UM93_02015 PF03484 tRNA synthetase B5 domain UM93_02015 PF03147 Ferredoxin-fold anticodon binding domain UM93_02015 PF01588 Putative tRNA binding domain UM93_02015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain UM93_02020 PF03976 Polyphosphate kinase 2 (PPK2) UM93_02030 PF11838 ERAP1-like C-terminal domain UM93_02030 PF01433 Peptidase family M1 domain UM93_02040 PF08240 Alcohol dehydrogenase GroES-like domain UM93_02040 PF00107 Zinc-binding dehydrogenase UM93_02050 PF02774 Semialdehyde dehydrogenase, dimerisation domain UM93_02050 PF01118 Semialdehyde dehydrogenase, NAD binding domain UM93_02055 PF01960 ArgJ family UM93_02060 PF00696 Amino acid kinase family UM93_02065 PF00202 Aminotransferase class-III UM93_02070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UM93_02070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UM93_02075 PF02863 Arginine repressor, C-terminal domain UM93_02075 PF01316 Arginine repressor, DNA binding domain UM93_02080 PF00764 Arginosuccinate synthase UM93_02085 PF14698 Argininosuccinate lyase C-terminal UM93_02085 PF00206 Lyase UM93_02115 PF13732 Domain of unknown function (DUF4162) UM93_02115 PF00005 ABC transporter UM93_02120 PF01061 ABC-2 type transporter UM93_02135 PF02805 Metal binding domain of Ada UM93_02135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UM93_02135 PF12833 Helix-turn-helix domain UM93_02135 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UM93_02140 PF12833 Helix-turn-helix domain UM93_02140 PF00730 HhH-GPD superfamily base excision DNA repair protein UM93_02140 PF06029 AlkA N-terminal domain UM93_02140 PF02805 Metal binding domain of Ada UM93_02160 PF02245 Methylpurine-DNA glycosylase (MPG) UM93_02180 PF00156 Phosphoribosyl transferase domain UM93_02190 PF00579 tRNA synthetases class I (W and Y) UM93_02220 PF00072 Response regulator receiver domain UM93_02220 PF00486 Transcriptional regulatory protein, C terminal UM93_02225 PF00512 His Kinase A (phospho-acceptor) domain UM93_02225 PF00672 HAMP domain UM93_02225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_02235 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase UM93_02255 PF13344 Haloacid dehalogenase-like hydrolase UM93_02255 PF18407 GCN5-related N-acetyltransferase like domain UM93_02275 PF02463 RecF/RecN/SMC N terminal domain UM93_02285 PF06418 CTP synthase N-terminus UM93_02285 PF00117 Glutamine amidotransferase class-I UM93_02295 PF02899 Phage integrase, N-terminal SAM-like domain UM93_02295 PF00589 Phage integrase family UM93_02310 PF00196 Bacterial regulatory proteins, luxR family UM93_02310 PF00072 Response regulator receiver domain UM93_02325 PF16874 Glycosyl hydrolase family 36 C-terminal domain UM93_02325 PF16875 Glycosyl hydrolase family 36 N-terminal domain UM93_02330 PF08281 Sigma-70, region 4 UM93_02330 PF04542 Sigma-70 region 2 UM93_02340 PF00285 Citrate synthase, C-terminal domain UM93_02350 PF03972 MmgE/PrpD family UM93_02355 PF07729 FCD domain UM93_02355 PF00392 Bacterial regulatory proteins, gntR family UM93_02365 PF02661 Fic/DOC family UM93_02375 PF00005 ABC transporter UM93_02380 PF01497 Periplasmic binding protein UM93_02385 PF01032 FecCD transport family UM93_02390 PF03621 MbtH-like protein UM93_02395 PF13193 AMP-binding enzyme C-terminal domain UM93_02395 PF00501 AMP-binding enzyme UM93_02395 PF00668 Condensation domain UM93_02395 PF00550 Phosphopantetheine attachment site UM93_02400 PF00756 Putative esterase UM93_02400 PF11806 Domain of unknown function (DUF3327) UM93_02405 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) UM93_02410 PF01370 NAD dependent epimerase/dehydratase family UM93_02410 PF02911 Formyl transferase, C-terminal domain UM93_02410 PF00551 Formyl transferase UM93_02415 PF00072 Response regulator receiver domain UM93_02425 PF00375 Sodium:dicarboxylate symporter family UM93_02440 PF13614 AAA domain UM93_02450 PF04079 Segregation and condensation complex subunit ScpB UM93_02455 PF00849 RNA pseudouridylate synthase UM93_02455 PF01479 S4 domain UM93_02465 PF02224 Cytidylate kinase UM93_02475 PF01926 50S ribosome-binding GTPase UM93_02475 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UM93_02500 PF00106 short chain dehydrogenase UM93_02520 PF00933 Glycosyl hydrolase family 3 N terminal domain UM93_02525 PF00528 Binding-protein-dependent transport system inner membrane component UM93_02530 PF00528 Binding-protein-dependent transport system inner membrane component UM93_02540 PF00356 Bacterial regulatory proteins, lacI family UM93_02545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UM93_02550 PF00528 Binding-protein-dependent transport system inner membrane component UM93_02570 PF04542 Sigma-70 region 2 UM93_02570 PF08281 Sigma-70, region 4 UM93_02575 PF03795 YCII-related domain UM93_02595 PF07690 Major Facilitator Superfamily UM93_02605 PF09278 MerR, DNA binding UM93_02605 PF00376 MerR family regulatory protein UM93_02655 PF01047 MarR family UM93_02680 PF00561 alpha/beta hydrolase fold UM93_02685 PF01476 LysM domain UM93_02685 PF06737 Transglycosylase-like domain UM93_02690 PF00356 Bacterial regulatory proteins, lacI family UM93_02700 PF07859 alpha/beta hydrolase fold UM93_02715 PF01597 Glycine cleavage H-protein UM93_02720 PF00498 FHA domain UM93_02725 PF00376 MerR family regulatory protein UM93_02730 PF02577 Bifunctional nuclease UM93_02735 PF13411 MerR HTH family regulatory protein UM93_02745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UM93_02745 PF02785 Biotin carboxylase C-terminal domain UM93_02745 PF00682 HMGL-like UM93_02745 PF02436 Conserved carboxylase domain UM93_02745 PF00289 Biotin carboxylase, N-terminal domain UM93_02745 PF00364 Biotin-requiring enzyme UM93_02755 PF00501 AMP-binding enzyme UM93_02760 PF00480 ROK family UM93_02770 PF12146 Serine aminopeptidase, S33 UM93_02780 PF01474 Class-II DAHP synthetase family UM93_02785 PF03793 PASTA domain UM93_02785 PF00069 Protein kinase domain UM93_02790 PF00877 NlpC/P60 family UM93_02790 PF01476 LysM domain UM93_02800 PF00348 Polyprenyl synthetase UM93_02810 PF00817 impB/mucB/samB family UM93_02810 PF11799 impB/mucB/samB family C-terminal domain UM93_02810 PF11798 IMS family HHH motif UM93_02820 PF02381 MraZ protein, putative antitoxin-like UM93_02825 PF01795 MraW methylase family UM93_02835 PF00905 Penicillin binding protein transpeptidase domain UM93_02835 PF03717 Penicillin-binding Protein dimerisation domain UM93_02840 PF08245 Mur ligase middle domain UM93_02840 PF02875 Mur ligase family, glutamate ligase domain UM93_02840 PF01225 Mur ligase family, catalytic domain UM93_02845 PF08245 Mur ligase middle domain UM93_02845 PF02875 Mur ligase family, glutamate ligase domain UM93_02845 PF01225 Mur ligase family, catalytic domain UM93_02850 PF00953 Glycosyl transferase family 4 UM93_02850 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 UM93_02855 PF02875 Mur ligase family, glutamate ligase domain UM93_02855 PF08245 Mur ligase middle domain UM93_02860 PF01098 Cell cycle protein UM93_02865 PF03033 Glycosyltransferase family 28 N-terminal domain UM93_02865 PF04101 Glycosyltransferase family 28 C-terminal domain UM93_02880 PF12327 FtsZ family, C-terminal domain UM93_02880 PF00091 Tubulin/FtsZ family, GTPase domain UM93_02890 PF01168 Alanine racemase, N-terminal domain UM93_02895 PF04472 Cell division protein SepF UM93_02905 PF05103 DivIVA protein UM93_02910 PF01252 Signal peptidase (SPase) II UM93_02915 PF00849 RNA pseudouridylate synthase UM93_02925 PF07733 Bacterial DNA polymerase III alpha NTPase domain UM93_02925 PF02811 PHP domain UM93_02925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UM93_02925 PF14579 Helix-hairpin-helix motif UM93_02935 PF00815 Histidinol dehydrogenase UM93_02940 PF03477 ATP cone domain UM93_02950 PF00480 ROK family UM93_02955 PF00557 Metallopeptidase family M24 UM93_02960 PF13810 Domain of unknown function (DUF4185) UM93_02965 PF02548 Ketopantoate hydroxymethyltransferase UM93_02970 PF00120 Glutamine synthetase, catalytic domain UM93_02970 PF03951 Glutamine synthetase, beta-Grasp domain UM93_02975 PF08335 GlnD PII-uridylyltransferase UM93_02975 PF03710 Glutamate-ammonia ligase adenylyltransferase UM93_02995 PF07555 beta-N-acetylglucosaminidase UM93_02995 PF00754 F5/8 type C domain UM93_02995 PF00963 Cohesin domain UM93_02995 PF02838 Glycosyl hydrolase family 20, domain 2 UM93_02995 PF00041 Fibronectin type III domain UM93_03000 PF00528 Binding-protein-dependent transport system inner membrane component UM93_03005 PF00005 ABC transporter UM93_03005 PF09383 NIL domain UM93_03010 PF03180 NLPA lipoprotein UM93_03020 PF00120 Glutamine synthetase, catalytic domain UM93_03020 PF03951 Glutamine synthetase, beta-Grasp domain UM93_03035 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family UM93_03035 PF04055 Radical SAM superfamily UM93_03040 PF03099 Biotin/lipoate A/B protein ligase family UM93_03050 PF08338 Domain of unknown function (DUF1731) UM93_03050 PF01370 NAD dependent epimerase/dehydratase family UM93_03055 PF14684 Tricorn protease C1 domain UM93_03055 PF14685 Tricorn protease PDZ domain UM93_03055 PF03572 Peptidase family S41 UM93_03055 PF07676 WD40-like Beta Propeller Repeat UM93_03060 PF02566 OsmC-like protein UM93_03080 PF02817 e3 binding domain UM93_03080 PF00364 Biotin-requiring enzyme UM93_03080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UM93_03085 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_03085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UM93_03090 PF00883 Cytosol aminopeptidase family, catalytic domain UM93_03090 PF02789 Cytosol aminopeptidase family, N-terminal domain UM93_03105 PF00140 Sigma-70 factor, region 1.2 UM93_03105 PF04542 Sigma-70 region 2 UM93_03105 PF04539 Sigma-70 region 3 UM93_03105 PF04545 Sigma-70, region 4 UM93_03115 PF01751 Toprim domain UM93_03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_03115 PF00986 DNA gyrase B subunit, carboxyl terminus UM93_03115 PF00204 DNA gyrase B UM93_03120 PF13649 Methyltransferase domain UM93_03130 PF03965 Penicillinase repressor UM93_03135 PF01654 Cytochrome bd terminal oxidase subunit I UM93_03140 PF02322 Cytochrome bd terminal oxidase subunit II UM93_03160 PF00893 Small Multidrug Resistance protein UM93_03165 PF04294 VanW like protein UM93_03175 PF00027 Cyclic nucleotide-binding domain UM93_03175 PF13302 Acetyltransferase (GNAT) domain UM93_03195 PF11268 Protein of unknown function (DUF3071) UM93_03230 PF02254 TrkA-N domain UM93_03230 PF02080 TrkA-C domain UM93_03235 PF02254 TrkA-N domain UM93_03235 PF02080 TrkA-C domain UM93_03240 PF13520 Amino acid permease UM93_03245 PF05958 tRNA (Uracil-5-)-methyltransferase UM93_03245 PF01938 TRAM domain UM93_03315 PF00293 NUDIX domain UM93_03325 PF00694 Aconitase C-terminal domain UM93_03325 PF00330 Aconitase family (aconitate hydratase) UM93_03335 PF02780 Transketolase, C-terminal domain UM93_03335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UM93_03335 PF02779 Transketolase, pyrimidine binding domain UM93_03350 PF00248 Aldo/keto reductase family UM93_03355 PF17203 Single cache domain 3 UM93_03355 PF00989 PAS fold UM93_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_03355 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UM93_03360 PF00072 Response regulator receiver domain UM93_03360 PF08279 HTH domain UM93_03365 PF00378 Enoyl-CoA hydratase/isomerase UM93_03365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UM93_03365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UM93_03370 PF02803 Thiolase, C-terminal domain UM93_03370 PF00108 Thiolase, N-terminal domain UM93_03375 PF00570 HRDC domain UM93_03375 PF01612 3'-5' exonuclease UM93_03400 PF01641 SelR domain UM93_03415 PF04073 Aminoacyl-tRNA editing domain UM93_03420 PF02657 Fe-S metabolism associated domain UM93_03425 PF00581 Rhodanese-like domain UM93_03435 PF03594 Benzoate membrane transport protein UM93_03445 PF00893 Small Multidrug Resistance protein UM93_03480 PF01327 Polypeptide deformylase UM93_03485 PF00551 Formyl transferase UM93_03485 PF02911 Formyl transferase, C-terminal domain UM93_03490 PF01189 16S rRNA methyltransferase RsmB/F UM93_03490 PF01029 NusB family UM93_03495 PF00834 Ribulose-phosphate 3 epimerase family UM93_03515 PF00925 GTP cyclohydrolase II UM93_03515 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UM93_03520 PF00925 GTP cyclohydrolase II UM93_03520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UM93_03525 PF00885 6,7-dimethyl-8-ribityllumazine synthase UM93_03530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UM93_03535 PF08029 HisG, C-terminal domain UM93_03535 PF01634 ATP phosphoribosyltransferase UM93_03540 PF00977 Histidine biosynthesis protein UM93_03550 PF01502 Phosphoribosyl-AMP cyclohydrolase UM93_03555 PF00425 chorismate binding enzyme UM93_03555 PF04715 Anthranilate synthase component I, N terminal region UM93_03570 PF00218 Indole-3-glycerol phosphate synthase UM93_03580 PF00290 Tryptophan synthase alpha chain UM93_03590 PF00310 Glutamine amidotransferases class-II UM93_03590 PF01493 GXGXG motif UM93_03590 PF01645 Conserved region in glutamate synthase UM93_03590 PF04898 Glutamate synthase central domain UM93_03595 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_03595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UM93_03600 PF00224 Pyruvate kinase, barrel domain UM93_03600 PF02887 Pyruvate kinase, alpha/beta domain UM93_03605 PF03861 ANTAR domain UM93_03605 PF00072 Response regulator receiver domain UM93_03635 PF00534 Glycosyl transferases group 1 UM93_03635 PF13439 Glycosyltransferase Family 4 UM93_03640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UM93_03640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UM93_03640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UM93_03650 PF07690 Major Facilitator Superfamily UM93_03655 PF01872 RibD C-terminal domain UM93_03665 PF03061 Thioesterase superfamily UM93_03670 PF01384 Phosphate transporter family UM93_03680 PF01367 5'-3' exonuclease, C-terminal SAM fold UM93_03680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UM93_03680 PF00476 DNA polymerase family A UM93_03685 PF00106 short chain dehydrogenase UM93_03695 PF13530 Sterol carrier protein domain UM93_03695 PF17668 Acetyltransferase (GNAT) domain UM93_03700 PF13530 Sterol carrier protein domain UM93_03700 PF17668 Acetyltransferase (GNAT) domain UM93_03705 PF00575 S1 RNA binding domain UM93_03715 PF01121 Dephospho-CoA kinase UM93_03715 PF04229 GrpB protein UM93_03730 PF12344 Ultra-violet resistance protein B UM93_03730 PF04851 Type III restriction enzyme, res subunit UM93_03730 PF17757 UvrB interaction domain UM93_03730 PF00271 Helicase conserved C-terminal domain UM93_03730 PF02151 UvrB/uvrC motif UM93_03735 PF03741 Integral membrane protein TerC family UM93_03745 PF00561 alpha/beta hydrolase fold UM93_03785 PF00753 Metallo-beta-lactamase superfamily UM93_03800 PF00005 ABC transporter UM93_03800 PF17760 UvrA interaction domain UM93_03800 PF17755 UvrA DNA-binding domain UM93_03805 PF13419 Haloacid dehalogenase-like hydrolase UM93_03810 PF01553 Acyltransferase UM93_03810 PF00501 AMP-binding enzyme UM93_03815 PF01541 GIY-YIG catalytic domain UM93_03815 PF12826 Helix-hairpin-helix motif UM93_03815 PF02151 UvrB/uvrC motif UM93_03815 PF08459 UvrC Helix-hairpin-helix N-terminal UM93_03820 PF03668 P-loop ATPase protein family UM93_03825 PF01933 Uncharacterised protein family UPF0052 UM93_03830 PF02650 WhiA C-terminal HTH domain UM93_03830 PF14527 WhiA LAGLIDADG-like domain UM93_03830 PF10298 WhiA N-terminal LAGLIDADG-like domain UM93_03835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UM93_03835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UM93_03840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UM93_03840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UM93_03845 PF00162 Phosphoglycerate kinase UM93_03865 PF00296 Luciferase-like monooxygenase UM93_03880 PF00005 ABC transporter UM93_03885 PF00497 Bacterial extracellular solute-binding proteins, family 3 UM93_03905 PF00121 Triosephosphate isomerase UM93_03910 PF03840 Preprotein translocase SecG subunit UM93_03920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UM93_03930 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UM93_03930 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UM93_03940 PF00923 Transaldolase/Fructose-6-phosphate aldolase UM93_03945 PF02779 Transketolase, pyrimidine binding domain UM93_03945 PF02780 Transketolase, C-terminal domain UM93_03945 PF00456 Transketolase, thiamine diphosphate binding domain UM93_03950 PF01040 UbiA prenyltransferase family UM93_03970 PF00905 Penicillin binding protein transpeptidase domain UM93_03980 PF01458 Uncharacterized protein family (UPF0051) UM93_03985 PF01458 Uncharacterized protein family (UPF0051) UM93_03995 PF00005 ABC transporter UM93_04000 PF01883 Iron-sulfur cluster assembly protein UM93_04005 PF04228 Putative neutral zinc metallopeptidase UM93_04010 PF16363 GDP-mannose 4,6 dehydratase UM93_04025 PF02632 BioY family UM93_04030 PF16326 ABC transporter C-terminal domain UM93_04030 PF00005 ABC transporter UM93_04030 PF12848 ABC transporter UM93_04070 PF00005 ABC transporter UM93_04080 PF00588 SpoU rRNA Methylase family UM93_04085 PF00578 AhpC/TSA family UM93_04090 PF01197 Ribosomal protein L31 UM93_04095 PF03099 Biotin/lipoate A/B protein ligase family UM93_04095 PF10437 Bacterial lipoate protein ligase C-terminus UM93_04115 PF11838 ERAP1-like C-terminal domain UM93_04115 PF01433 Peptidase family M1 domain UM93_04120 PF03601 Conserved hypothetical protein 698 UM93_04125 PF04174 A circularly permuted ATPgrasp UM93_04135 PF01841 Transglutaminase-like superfamily UM93_04135 PF08379 Bacterial transglutaminase-like N-terminal region UM93_04210 PF00106 short chain dehydrogenase UM93_04220 PF13439 Glycosyltransferase Family 4 UM93_04220 PF00534 Glycosyl transferases group 1 UM93_04230 PF00440 Bacterial regulatory proteins, tetR family UM93_04235 PF02803 Thiolase, C-terminal domain UM93_04235 PF00108 Thiolase, N-terminal domain UM93_04255 PF03466 LysR substrate binding domain UM93_04255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_04270 PF01546 Peptidase family M20/M25/M40 UM93_04270 PF07687 Peptidase dimerisation domain UM93_04290 PF00248 Aldo/keto reductase family UM93_04295 PF02673 Bacitracin resistance protein BacA UM93_04300 PF01406 tRNA synthetases class I (C) catalytic domain UM93_04310 PF13419 Haloacid dehalogenase-like hydrolase UM93_04315 PF00571 CBS domain UM93_04315 PF02163 Peptidase family M50 UM93_04325 PF00004 ATPase family associated with various cellular activities (AAA) UM93_04325 PF16450 Proteasomal ATPase OB C-terminal domain UM93_04325 PF17758 Proteasomal ATPase OB N-terminal domain UM93_04330 PF03136 Pup-ligase protein UM93_04340 PF05639 Pup-like protein UM93_04345 PF00227 Proteasome subunit UM93_04350 PF00227 Proteasome subunit UM93_04355 PF03136 Pup-ligase protein UM93_04365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UM93_04370 PF13280 WYL domain UM93_04375 PF00324 Amino acid permease UM93_04385 PF02416 mttA/Hcf106 family UM93_04390 PF00902 Sec-independent protein translocase protein (TatC) UM93_04395 PF08148 DSHCT (NUC185) domain UM93_04395 PF00270 DEAD/DEAH box helicase UM93_04395 PF00271 Helicase conserved C-terminal domain UM93_04400 PF07969 Amidohydrolase family UM93_04405 PF00535 Glycosyl transferase family 2 UM93_04410 PF00756 Putative esterase UM93_04415 PF13397 RNA polymerase-binding protein UM93_04420 PF01145 SPFH domain / Band 7 family UM93_04430 PF00392 Bacterial regulatory proteins, gntR family UM93_04440 PF08241 Methyltransferase domain UM93_04445 PF00326 Prolyl oligopeptidase family UM93_04445 PF07676 WD40-like Beta Propeller Repeat UM93_04450 PF01327 Polypeptide deformylase UM93_04465 PF02447 GntP family permease UM93_04475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UM93_04475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UM93_04475 PF03129 Anticodon binding domain UM93_04480 PF01230 HIT domain UM93_04490 PF01680 SOR/SNZ family UM93_04500 PF00583 Acetyltransferase (GNAT) family UM93_04505 PF01432 Peptidase family M3 UM93_04510 PF07411 Domain of unknown function (DUF1508) UM93_04515 PF00733 Asparagine synthase UM93_04515 PF13537 Glutamine amidotransferase domain UM93_04520 PF01174 SNO glutamine amidotransferase family UM93_04525 PF01709 Transcriptional regulator UM93_04530 PF02075 Crossover junction endodeoxyribonuclease RuvC UM93_04535 PF07499 RuvA, C-terminal domain UM93_04535 PF01330 RuvA N terminal domain UM93_04540 PF17864 RuvB AAA lid domain UM93_04540 PF05496 Holliday junction DNA helicase RuvB P-loop domain UM93_04540 PF05491 RuvB C-terminal winged helix domain UM93_04555 PF07549 SecD/SecF GG Motif UM93_04555 PF02355 Protein export membrane protein UM93_04560 PF02824 TGS domain UM93_04560 PF13291 ACT domain UM93_04560 PF04607 Region found in RelA / SpoT proteins UM93_04570 PF03993 Domain of Unknown Function (DUF349) UM93_04580 PF03129 Anticodon binding domain UM93_04580 PF13393 Histidyl-tRNA synthetase UM93_04585 PF13520 Amino acid permease UM93_04590 PF01336 OB-fold nucleic acid binding domain UM93_04590 PF00152 tRNA synthetases class II (D, K and N) UM93_04590 PF02938 GAD domain UM93_04600 PF00583 Acetyltransferase (GNAT) family UM93_04615 PF00004 ATPase family associated with various cellular activities (AAA) UM93_04615 PF16193 AAA C-terminal domain UM93_04615 PF12002 MgsA AAA+ ATPase C terminal UM93_04625 PF00163 Ribosomal protein S4/S9 N-terminal domain UM93_04625 PF01479 S4 domain UM93_04640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UM93_04640 PF01411 tRNA synthetases class II (A) UM93_04640 PF02272 DHHA1 domain UM93_04655 PF18317 Shikimate 5'-dehydrogenase C-terminal domain UM93_04655 PF08501 Shikimate dehydrogenase substrate binding domain UM93_04660 PF01264 Chorismate synthase UM93_04665 PF01202 Shikimate kinase UM93_04670 PF01761 3-dehydroquinate synthase UM93_04680 PF09285 Elongation factor P, C-terminal UM93_04680 PF08207 Elongation factor P (EF-P) KOW-like domain UM93_04680 PF01132 Elongation factor P (EF-P) OB domain UM93_04685 PF01029 NusB family UM93_04695 PF00156 Phosphoribosyl transferase domain UM93_04700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UM93_04700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UM93_04705 PF01979 Amidohydrolase family UM93_04715 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UM93_04715 PF00117 Glutamine amidotransferase class-I UM93_04720 PF02142 MGS-like domain UM93_04720 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UM93_04720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UM93_04725 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UM93_04730 PF07690 Major Facilitator Superfamily UM93_04740 PF00625 Guanylate kinase UM93_04745 PF00625 Guanylate kinase UM93_04750 PF01192 RNA polymerase Rpb6 UM93_04755 PF04127 DNA / pantothenate metabolism flavoprotein UM93_04755 PF02441 Flavoprotein UM93_04760 PF02772 S-adenosylmethionine synthetase, central domain UM93_04760 PF00438 S-adenosylmethionine synthetase, N-terminal domain UM93_04760 PF02773 S-adenosylmethionine synthetase, C-terminal domain UM93_04765 PF17764 3′ DNA-binding domain (3′BD) UM93_04775 PF12697 Alpha/beta hydrolase family UM93_04780 PF00248 Aldo/keto reductase family UM93_04785 PF04198 Putative sugar-binding domain UM93_04790 PF01266 FAD dependent oxidoreductase UM93_04790 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UM93_04795 PF00230 Major intrinsic protein UM93_04800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UM93_04800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UM93_04810 PF00171 Aldehyde dehydrogenase family UM93_04815 PF00133 tRNA synthetases class I (I, L, M and V) UM93_04815 PF09334 tRNA synthetases class I (M) UM93_04815 PF08264 Anticodon-binding domain of tRNA UM93_04815 PF13603 Leucyl-tRNA synthetase, Domain 2 UM93_04820 PF02645 Uncharacterised protein, DegV family COG1307 UM93_04840 PF01649 Ribosomal protein S20 UM93_04850 PF06421 GTP-binding protein LepA C-terminus UM93_04850 PF00009 Elongation factor Tu GTP binding domain UM93_04850 PF00679 Elongation factor G C-terminus UM93_04855 PF04055 Radical SAM superfamily UM93_04870 PF01628 HrcA protein C terminal domain UM93_04870 PF08220 DeoR-like helix-turn-helix domain UM93_04875 PF01556 DnaJ C terminal domain UM93_04875 PF00226 DnaJ domain UM93_04875 PF00684 DnaJ central domain UM93_04880 PF04452 RNA methyltransferase UM93_04890 PF03466 LysR substrate binding domain UM93_04890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_04900 PF02562 PhoH-like protein UM93_04905 PF02130 Uncharacterized protein family UPF0054 UM93_04915 PF01926 50S ribosome-binding GTPase UM93_04915 PF07650 KH domain UM93_04925 PF01431 Peptidase family M13 UM93_04925 PF05649 Peptidase family M13 UM93_04930 PF00682 HMGL-like UM93_04930 PF08502 LeuA allosteric (dimerisation) domain UM93_04940 PF02565 Recombination protein O C terminal UM93_04940 PF11967 Recombination protein O N terminal UM93_04945 PF01255 Putative undecaprenyl diphosphate synthase UM93_04950 PF12146 Serine aminopeptidase, S33 UM93_04960 PF00890 FAD binding domain UM93_04965 PF01180 Dihydroorotate dehydrogenase UM93_04975 PF01546 Peptidase family M20/M25/M40 UM93_04975 PF07687 Peptidase dimerisation domain UM93_04980 PF01521 Iron-sulphur cluster biosynthesis UM93_04985 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UM93_04990 PF00115 Cytochrome C and Quinol oxidase polypeptide I UM93_04995 PF12270 Cytochrome c oxidase subunit IV UM93_05020 PF13631 Cytochrome b(N-terminal)/b6/petB UM93_05025 PF00355 Rieske [2Fe-2S] domain UM93_05030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UM93_05030 PF00034 Cytochrome c UM93_05035 PF00510 Cytochrome c oxidase subunit III UM93_05040 PF00591 Glycosyl transferase family, a/b domain UM93_05040 PF02885 Glycosyl transferase family, helical bundle domain UM93_05065 PF04545 Sigma-70, region 4 UM93_05065 PF04542 Sigma-70 region 2 UM93_05095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UM93_05095 PF00205 Thiamine pyrophosphate enzyme, central domain UM93_05095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UM93_05110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_05110 PF03466 LysR substrate binding domain UM93_05130 PF01301 Glycosyl hydrolases family 35 UM93_05135 PF02836 Glycosyl hydrolases family 2, TIM barrel domain UM93_05135 PF16353 Domain of unknown function(DUF4981) UM93_05135 PF02929 Beta galactosidase small chain UM93_05135 PF02837 Glycosyl hydrolases family 2, sugar binding domain UM93_05140 PF00528 Binding-protein-dependent transport system inner membrane component UM93_05145 PF00528 Binding-protein-dependent transport system inner membrane component UM93_05155 PF08361 MAATS-type transcriptional repressor, C-terminal region UM93_05155 PF00440 Bacterial regulatory proteins, tetR family UM93_05180 PF01425 Amidase UM93_05190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UM93_05200 PF13026 Protein of unknown function (DUF3887) UM93_05200 PF12146 Serine aminopeptidase, S33 UM93_05205 PF04542 Sigma-70 region 2 UM93_05205 PF08281 Sigma-70, region 4 UM93_05215 PF00135 Carboxylesterase family UM93_05235 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin UM93_05245 PF00440 Bacterial regulatory proteins, tetR family UM93_05290 PF16363 GDP-mannose 4,6 dehydratase UM93_05305 PF01638 HxlR-like helix-turn-helix UM93_05340 PF12833 Helix-turn-helix domain UM93_05350 PF03551 Transcriptional regulator PadR-like family UM93_05350 PF13847 Methyltransferase domain UM93_05360 PF17760 UvrA interaction domain UM93_05360 PF00005 ABC transporter UM93_05360 PF17755 UvrA DNA-binding domain UM93_05365 PF08281 Sigma-70, region 4 UM93_05365 PF04542 Sigma-70 region 2 UM93_05370 PF03795 YCII-related domain UM93_05395 PF01494 FAD binding domain UM93_05405 PF00583 Acetyltransferase (GNAT) family UM93_05405 PF13508 Acetyltransferase (GNAT) domain UM93_05410 PF00462 Glutaredoxin UM93_05435 PF00268 Ribonucleotide reductase, small chain UM93_05440 PF08343 Ribonucleotide reductase N-terminal UM93_05440 PF02867 Ribonucleotide reductase, barrel domain UM93_05440 PF00317 Ribonucleotide reductase, all-alpha domain UM93_05445 PF07972 NrdI Flavodoxin like UM93_05470 PF01593 Flavin containing amine oxidoreductase UM93_05480 PF00171 Aldehyde dehydrogenase family UM93_05485 PF01717 Cobalamin-independent synthase, Catalytic domain UM93_05485 PF08267 Cobalamin-independent synthase, N-terminal domain UM93_05490 PF02219 Methylenetetrahydrofolate reductase UM93_05525 PF07726 ATPase family associated with various cellular activities (AAA) UM93_05525 PF17863 AAA lid domain UM93_05530 PF13193 AMP-binding enzyme C-terminal domain UM93_05530 PF00501 AMP-binding enzyme UM93_05535 PF01047 MarR family UM93_05535 PF00480 ROK family UM93_05545 PF05175 Methyltransferase small domain UM93_05560 PF00072 Response regulator receiver domain UM93_05560 PF00196 Bacterial regulatory proteins, luxR family UM93_05585 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) UM93_05585 PF18766 SWI2/SNF2 ATPase UM93_05585 PF12008 Type I restriction and modification enzyme - subunit R C terminal UM93_05595 PF01420 Type I restriction modification DNA specificity domain UM93_05600 PF12161 HsdM N-terminal domain UM93_05600 PF02384 N-6 DNA Methylase UM93_05625 PF01467 Cytidylyltransferase-like UM93_05635 PF00171 Aldehyde dehydrogenase family UM93_05640 PF01472 PUA domain UM93_05640 PF00696 Amino acid kinase family UM93_05645 PF09269 Domain of unknown function (DUF1967) UM93_05645 PF01018 GTP1/OBG UM93_05645 PF01926 50S ribosome-binding GTPase UM93_05650 PF01016 Ribosomal L27 protein UM93_05655 PF00829 Ribosomal prokaryotic L21 protein UM93_05665 PF10150 Ribonuclease E/G family UM93_05675 PF00579 tRNA synthetases class I (W and Y) UM93_05695 PF00334 Nucleoside diphosphate kinase UM93_05705 PF02875 Mur ligase family, glutamate ligase domain UM93_05705 PF08245 Mur ligase middle domain UM93_05720 PF00106 short chain dehydrogenase UM93_05730 PF00133 tRNA synthetases class I (I, L, M and V) UM93_05730 PF08264 Anticodon-binding domain of tRNA UM93_05735 PF01323 DSBA-like thioredoxin domain UM93_05745 PF10431 C-terminal, D2-small domain, of ClpB protein UM93_05745 PF06689 ClpX C4-type zinc finger UM93_05745 PF07724 AAA domain (Cdc48 subfamily) UM93_05750 PF00574 Clp protease UM93_05755 PF00574 Clp protease UM93_05765 PF05697 Bacterial trigger factor protein (TF) UM93_05765 PF05698 Bacterial trigger factor protein (TF) C-terminus UM93_05790 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UM93_05790 PF06827 Zinc finger found in FPG and IleRS UM93_05790 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UM93_05795 PF02502 Ribose/Galactose Isomerase UM93_05805 PF03447 Homoserine dehydrogenase, NAD binding domain UM93_05805 PF01958 Domain of unknown function DUF108 UM93_05810 PF11838 ERAP1-like C-terminal domain UM93_05810 PF01433 Peptidase family M1 domain UM93_05825 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UM93_05825 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UM93_05830 PF00067 Cytochrome P450 UM93_05835 PF01370 NAD dependent epimerase/dehydratase family UM93_05855 PF01152 Bacterial-like globin UM93_05870 PF12848 ABC transporter UM93_05870 PF00005 ABC transporter UM93_05885 PF07690 Major Facilitator Superfamily UM93_05940 PF00557 Metallopeptidase family M24 UM93_05960 PF00929 Exonuclease UM93_05975 PF01327 Polypeptide deformylase UM93_06005 PF00089 Trypsin UM93_06045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UM93_06045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UM93_06050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UM93_06055 PF03883 Peroxide stress protein YaaA UM93_06060 PF02591 C4-type zinc ribbon domain UM93_06065 PF01784 NIF3 (NGG1p interacting factor 3) UM93_06070 PF01625 Peptide methionine sulfoxide reductase UM93_06075 PF00291 Pyridoxal-phosphate dependent enzyme UM93_06080 PF00132 Bacterial transferase hexapeptide (six repeats) UM93_06085 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain UM93_06085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UM93_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_06095 PF03466 LysR substrate binding domain UM93_06100 PF00890 FAD binding domain UM93_06100 PF02910 Fumarate reductase flavoprotein C-term UM93_06110 PF18113 Rubredoxin binding C-terminal domain UM93_06110 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_06115 PF07690 Major Facilitator Superfamily UM93_06125 PF13302 Acetyltransferase (GNAT) domain UM93_06135 PF02146 Sir2 family UM93_06140 PF00578 AhpC/TSA family UM93_06145 PF11253 Protein of unknown function (DUF3052) UM93_06150 PF00456 Transketolase, thiamine diphosphate binding domain UM93_06150 PF17831 Pyruvate dehydrogenase E1 component middle domain UM93_06160 PF03575 Peptidase family S51 UM93_06165 PF13556 PucR C-terminal helix-turn-helix domain UM93_06165 PF17853 GGDEF-like domain UM93_06170 PF00698 Acyl transferase domain UM93_06175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UM93_06175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UM93_06180 PF00550 Phosphopantetheine attachment site UM93_06185 PF00109 Beta-ketoacyl synthase, N-terminal domain UM93_06185 PF02801 Beta-ketoacyl synthase, C-terminal domain UM93_06195 PF00589 Phage integrase family UM93_06195 PF02899 Phage integrase, N-terminal SAM-like domain UM93_06200 PF02481 DNA recombination-mediator protein A UM93_06205 PF01078 Magnesium chelatase, subunit ChlI UM93_06205 PF13335 Magnesium chelatase, subunit ChlI C-terminal UM93_06210 PF02021 Uncharacterised protein family UPF0102 UM93_06215 PF10611 Protein of unknown function (DUF2469) UM93_06220 PF01351 Ribonuclease HII UM93_06225 PF10502 Signal peptidase, peptidase S26 UM93_06230 PF10502 Signal peptidase, peptidase S26 UM93_06235 PF01245 Ribosomal protein L19 UM93_06240 PF01746 tRNA (Guanine-1)-methyltransferase UM93_06245 PF01782 RimM N-terminal domain UM93_06255 PF00886 Ribosomal protein S16 UM93_06265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UM93_06270 PF13667 ThiC-associated domain UM93_06270 PF01964 Radical SAM ThiC family UM93_06275 PF00583 Acetyltransferase (GNAT) family UM93_06280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UM93_06280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UM93_06285 PF02978 Signal peptide binding domain UM93_06285 PF02881 SRP54-type protein, helical bundle domain UM93_06285 PF00448 SRP54-type protein, GTPase domain UM93_06290 PF13302 Acetyltransferase (GNAT) domain UM93_06295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UM93_06295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UM93_06300 PF00543 Nitrogen regulatory protein P-II UM93_06310 PF04978 Protein of unknown function (DUF664) UM93_06315 PF02881 SRP54-type protein, helical bundle domain UM93_06315 PF00448 SRP54-type protein, GTPase domain UM93_06330 PF06470 SMC proteins Flexible Hinge Domain UM93_06330 PF02463 RecF/RecN/SMC N terminal domain UM93_06335 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UM93_06335 PF06827 Zinc finger found in FPG and IleRS UM93_06335 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UM93_06340 PF14622 Ribonuclease-III-like UM93_06340 PF00035 Double-stranded RNA binding motif UM93_06345 PF01783 Ribosomal L32p protein family UM93_06350 PF02620 Large ribosomal RNA subunit accumulation protein YceD UM93_06355 PF01467 Cytidylyltransferase-like UM93_06360 PF00155 Aminotransferase class I and II UM93_06375 PF00270 DEAD/DEAH box helicase UM93_06375 PF17191 RecG wedge domain UM93_06375 PF00271 Helicase conserved C-terminal domain UM93_06380 PF13684 Dihydroxyacetone kinase family UM93_06380 PF02734 DAK2 domain UM93_06385 PF02769 AIR synthase related protein, C-terminal domain UM93_06385 PF00586 AIR synthase related protein, N-terminal domain UM93_06395 PF07478 D-ala D-ala ligase C-terminus UM93_06395 PF01820 D-ala D-ala ligase N-terminus UM93_06400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UM93_06400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UM93_06410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UM93_06415 PF00694 Aconitase C-terminal domain UM93_06420 PF00330 Aconitase family (aconitate hydratase) UM93_06425 PF09339 IclR helix-turn-helix domain UM93_06425 PF01614 Bacterial transcriptional regulator UM93_06460 PF00749 tRNA synthetases class I (E and Q), catalytic domain UM93_06465 PF01557 Fumarylacetoacetate (FAA) hydrolase family UM93_06470 PF01063 Amino-transferase class IV UM93_06475 PF00180 Isocitrate/isopropylmalate dehydrogenase UM93_06480 PF07730 Histidine kinase UM93_06485 PF00196 Bacterial regulatory proteins, luxR family UM93_06485 PF00072 Response regulator receiver domain UM93_06490 PF12704 MacB-like periplasmic core domain UM93_06490 PF02687 FtsX-like permease family UM93_06490 PF00005 ABC transporter UM93_06495 PF12704 MacB-like periplasmic core domain UM93_06495 PF02687 FtsX-like permease family UM93_06500 PF08264 Anticodon-binding domain of tRNA UM93_06500 PF09334 tRNA synthetases class I (M) UM93_06515 PF01842 ACT domain UM93_06515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UM93_06515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UM93_06520 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UM93_06520 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain UM93_06525 PF10369 Small subunit of acetolactate synthase UM93_06530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UM93_06530 PF00205 Thiamine pyrophosphate enzyme, central domain UM93_06530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UM93_06535 PF00920 Dehydratase family UM93_06545 PF07690 Major Facilitator Superfamily UM93_06560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UM93_06560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UM93_06565 PF00440 Bacterial regulatory proteins, tetR family UM93_06565 PF17754 MftR C-terminal domain UM93_06580 PF00248 Aldo/keto reductase family UM93_06585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UM93_06600 PF00440 Bacterial regulatory proteins, tetR family UM93_06605 PF00578 AhpC/TSA family UM93_06615 PF14031 Putative serine dehydratase domain UM93_06625 PF02469 Fasciclin domain UM93_06630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UM93_06635 PF06039 Malate:quinone oxidoreductase (Mqo) UM93_06640 PF00873 AcrB/AcrD/AcrF family UM93_06655 PF00296 Luciferase-like monooxygenase UM93_06670 PF01841 Transglutaminase-like superfamily UM93_06670 PF08379 Bacterial transglutaminase-like N-terminal region UM93_06675 PF07687 Peptidase dimerisation domain UM93_06675 PF01546 Peptidase family M20/M25/M40 UM93_06695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UM93_06695 PF03129 Anticodon binding domain UM93_06700 PF00266 Aminotransferase class-V UM93_06705 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UM93_06705 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UM93_06715 PF02445 Quinolinate synthetase A protein UM93_06730 PF00324 Amino acid permease UM93_06735 PF00676 Dehydrogenase E1 component UM93_06740 PF02780 Transketolase, C-terminal domain UM93_06740 PF02779 Transketolase, pyrimidine binding domain UM93_06745 PF02817 e3 binding domain UM93_06745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UM93_06745 PF00364 Biotin-requiring enzyme UM93_06750 PF12697 Alpha/beta hydrolase family UM93_06765 PF00069 Protein kinase domain UM93_06770 PF03737 Aldolase/RraA UM93_06770 PF00180 Isocitrate/isopropylmalate dehydrogenase UM93_06780 PF00701 Dihydrodipicolinate synthetase family UM93_06785 PF00171 Aldehyde dehydrogenase family UM93_06790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UM93_06795 PF00083 Sugar (and other) transporter UM93_06820 PF10703 MoaF N-terminal domain UM93_06820 PF17409 MoaF C-terminal domain UM93_06835 PF12399 Branched-chain amino acid ATP-binding cassette transporter UM93_06835 PF00005 ABC transporter UM93_06840 PF00005 ABC transporter UM93_06845 PF00732 GMC oxidoreductase UM93_06845 PF05199 GMC oxidoreductase UM93_06850 PF10703 MoaF N-terminal domain UM93_06850 PF17409 MoaF C-terminal domain UM93_06855 PF07969 Amidohydrolase family UM93_06860 PF04229 GrpB protein UM93_06865 PF00106 short chain dehydrogenase UM93_06885 PF00171 Aldehyde dehydrogenase family UM93_06890 PF01179 Copper amine oxidase, enzyme domain UM93_06890 PF02728 Copper amine oxidase, N3 domain UM93_06900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UM93_06900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_06905 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal UM93_06905 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal UM93_06910 PF01613 Flavin reductase like domain UM93_06915 PF09339 IclR helix-turn-helix domain UM93_06915 PF01614 Bacterial transcriptional regulator UM93_06925 PF13476 AAA domain UM93_06930 PF12320 Type 5 capsule protein repressor C-terminal domain UM93_06930 PF00149 Calcineurin-like phosphoesterase UM93_06960 PF01541 GIY-YIG catalytic domain UM93_06960 PF00929 Exonuclease UM93_06965 PF13419 Haloacid dehalogenase-like hydrolase UM93_06975 PF00005 ABC transporter UM93_06985 PF00293 NUDIX domain UM93_06995 PF00999 Sodium/hydrogen exchanger family UM93_07005 PF01725 Ham1 family UM93_07010 PF03725 3' exoribonuclease family, domain 2 UM93_07010 PF01138 3' exoribonuclease family, domain 1 UM93_07015 PF12706 Beta-lactamase superfamily domain UM93_07020 PF01177 Asp/Glu/Hydantoin racemase UM93_07030 PF02617 ATP-dependent Clp protease adaptor protein ClpS UM93_07035 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UM93_07035 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain UM93_07040 PF00857 Isochorismatase family UM93_07050 PF04851 Type III restriction enzyme, res subunit UM93_07060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UM93_07070 PF00005 ABC transporter UM93_07070 PF13732 Domain of unknown function (DUF4162) UM93_07075 PF00085 Thioredoxin UM93_07100 PF01939 Endonuclease NucS UM93_07105 PF01979 Amidohydrolase family UM93_07110 PF00313 'Cold-shock' DNA-binding domain UM93_07115 PF00376 MerR family regulatory protein UM93_07115 PF09278 MerR, DNA binding UM93_07120 PF00753 Metallo-beta-lactamase superfamily UM93_07130 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UM93_07135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UM93_07135 PF02874 ATP synthase alpha/beta family, beta-barrel domain UM93_07140 PF00231 ATP synthase UM93_07145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UM93_07145 PF00306 ATP synthase alpha/beta chain, C terminal domain UM93_07145 PF02874 ATP synthase alpha/beta family, beta-barrel domain UM93_07150 PF00213 ATP synthase delta (OSCP) subunit UM93_07155 PF00430 ATP synthase B/B' CF(0) UM93_07160 PF00137 ATP synthase subunit C UM93_07165 PF00119 ATP synthase A chain UM93_07195 PF13649 Methyltransferase domain UM93_07195 PF17827 PrmC N-terminal domain UM93_07200 PF03462 PCRF domain UM93_07200 PF00472 RF-1 domain UM93_07205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UM93_07205 PF07498 Rho termination factor, N-terminal domain UM93_07205 PF07497 Rho termination factor, RNA-binding domain UM93_07210 PF00288 GHMP kinases N terminal domain UM93_07215 PF00291 Pyridoxal-phosphate dependent enzyme UM93_07220 PF03447 Homoserine dehydrogenase, NAD binding domain UM93_07220 PF01842 ACT domain UM93_07220 PF00742 Homoserine dehydrogenase UM93_07225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UM93_07225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UM93_07230 PF00750 tRNA synthetases class I (R) UM93_07230 PF03485 Arginyl tRNA synthetase N terminal domain UM93_07230 PF05746 DALR anticodon binding domain UM93_07240 PF07690 Major Facilitator Superfamily UM93_07255 PF00175 Oxidoreductase NAD-binding domain UM93_07255 PF00111 2Fe-2S iron-sulfur cluster binding domain UM93_07255 PF00970 Oxidoreductase FAD-binding domain UM93_07280 PF04408 Helicase associated domain (HA2) UM93_07280 PF00271 Helicase conserved C-terminal domain UM93_07280 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold UM93_07280 PF00270 DEAD/DEAH box helicase UM93_07280 PF11898 Domain of unknown function (DUF3418) UM93_07285 PF01230 HIT domain UM93_07290 PF00107 Zinc-binding dehydrogenase UM93_07290 PF08240 Alcohol dehydrogenase GroES-like domain UM93_07295 PF00581 Rhodanese-like domain UM93_07305 PF00583 Acetyltransferase (GNAT) family UM93_07320 PF00950 ABC 3 transport family UM93_07325 PF00005 ABC transporter UM93_07335 PF00571 CBS domain UM93_07335 PF01595 Cyclin M transmembrane N-terminal domain UM93_07340 PF01595 Cyclin M transmembrane N-terminal domain UM93_07340 PF03471 Transporter associated domain UM93_07340 PF00571 CBS domain UM93_07345 PF00478 IMP dehydrogenase / GMP reductase domain UM93_07345 PF00571 CBS domain UM93_07350 PF00676 Dehydrogenase E1 component UM93_07350 PF16078 2-oxoglutarate dehydrogenase N-terminus UM93_07350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UM93_07350 PF16870 2-oxoglutarate dehydrogenase C-terminal UM93_07350 PF02779 Transketolase, pyrimidine binding domain UM93_07390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UM93_07395 PF03193 RsgA GTPase UM93_07400 PF00459 Inositol monophosphatase family UM93_07405 PF00266 Aminotransferase class-V UM93_07410 PF08241 Methyltransferase domain UM93_07415 PF01566 Natural resistance-associated macrophage protein UM93_07415 PF03358 NADPH-dependent FMN reductase UM93_07420 PF01325 Iron dependent repressor, N-terminal DNA binding domain UM93_07420 PF18357 Diphteria toxin repressor SH3 domain UM93_07420 PF02742 Iron dependent repressor, metal binding and dimerisation domain UM93_07425 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UM93_07430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UM93_07450 PF03583 Secretory lipase UM93_07465 PF00933 Glycosyl hydrolase family 3 N terminal domain UM93_07475 PF01668 SmpB protein UM93_07480 PF01551 Peptidase family M23 UM93_07480 PF04225 Opacity-associated protein A LysM-like domain UM93_07485 PF18075 FtsX extracellular domain UM93_07485 PF02687 FtsX-like permease family UM93_07490 PF00005 ABC transporter UM93_07495 PF03462 PCRF domain UM93_07495 PF00472 RF-1 domain UM93_07530 PF00437 Type II/IV secretion system protein UM93_07585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UM93_07590 PF01370 NAD dependent epimerase/dehydratase family UM93_07595 PF00483 Nucleotidyl transferase UM93_07605 PF03102 NeuB family UM93_07605 PF08666 SAF domain UM93_07615 PF02348 Cytidylyltransferase UM93_07640 PF00535 Glycosyl transferase family 2 UM93_07655 PF01757 Acyltransferase family UM93_07670 PF14524 Wzt C-terminal domain UM93_07670 PF00005 ABC transporter UM93_07675 PF01061 ABC-2 type transporter UM93_07680 PF17994 Galactofuranosyltransferase 2 N-terminal UM93_07685 PF03275 UDP-galactopyranose mutase UM93_07695 PF02467 Transcription factor WhiB UM93_07700 PF07568 Histidine kinase UM93_07700 PF12282 Signal transduction histidine kinase UM93_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_07705 PF05088 Bacterial NAD-glutamate dehydrogenase UM93_07745 PF07516 SecA Wing and Scaffold domain UM93_07745 PF01043 SecA preprotein cross-linking domain UM93_07745 PF07517 SecA DEAD-like domain UM93_07750 PF06224 Winged helix DNA-binding domain UM93_07755 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus UM93_07755 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UM93_07765 PF10646 Sporulation and spore germination UM93_07765 PF10647 Lipoprotein LpqB beta-propeller domain UM93_07775 PF00072 Response regulator receiver domain UM93_07775 PF00486 Transcriptional regulatory protein, C terminal UM93_07800 PF17863 AAA lid domain UM93_07800 PF07726 ATPase family associated with various cellular activities (AAA) UM93_07815 PF00574 Clp protease UM93_07820 PF00574 Clp protease UM93_07855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UM93_07855 PF00005 ABC transporter UM93_07860 PF12911 N-terminal TM domain of oligopeptide transport permease C UM93_07860 PF00528 Binding-protein-dependent transport system inner membrane component UM93_07875 PF00117 Glutamine amidotransferase class-I UM93_07875 PF02540 NAD synthase UM93_07875 PF00958 GMP synthase C terminal domain UM93_07890 PF00266 Aminotransferase class-V UM93_07900 PF07690 Major Facilitator Superfamily UM93_07940 PF00561 alpha/beta hydrolase fold UM93_07945 PF01053 Cys/Met metabolism PLP-dependent enzyme UM93_07970 PF09375 Imelysin UM93_07975 PF10518 TAT (twin-arginine translocation) pathway signal sequence UM93_07975 PF04261 Dyp-type peroxidase family UM93_07985 PF08220 DeoR-like helix-turn-helix domain UM93_07985 PF00455 DeoR C terminal sensor domain UM93_07990 PF01116 Fructose-bisphosphate aldolase class-II UM93_07995 PF00294 pfkB family carbohydrate kinase UM93_08005 PF01380 SIS domain UM93_08010 PF17451 Glycosyl hydrolase 101 beta sandwich domain UM93_08010 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase UM93_08010 PF08305 NPCBM/NEW2 domain UM93_08010 PF12905 Endo-alpha-N-acetylgalactosaminidase UM93_08010 PF18080 Galactose mutarotase-like fold domain UM93_08010 PF17974 Galactose-binding domain-like UM93_08015 PF00266 Aminotransferase class-V UM93_08040 PF01979 Amidohydrolase family UM93_08050 PF01546 Peptidase family M20/M25/M40 UM93_08055 PF17391 Urocanase N-terminal domain UM93_08055 PF01175 Urocanase Rossmann-like domain UM93_08055 PF17392 Urocanase C-terminal domain UM93_08065 PF00221 Aromatic amino acid lyase UM93_08070 PF01810 LysE type translocator UM93_08095 PF00155 Aminotransferase class I and II UM93_08100 PF08240 Alcohol dehydrogenase GroES-like domain UM93_08100 PF00107 Zinc-binding dehydrogenase UM93_08125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_08125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UM93_08130 PF00356 Bacterial regulatory proteins, lacI family UM93_08140 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08155 PF02637 GatB domain UM93_08155 PF02934 GatB/GatE catalytic domain UM93_08160 PF01425 Amidase UM93_08165 PF02686 Glu-tRNAGln amidotransferase C subunit UM93_08175 PF00781 Diacylglycerol kinase catalytic domain UM93_08180 PF00684 DnaJ central domain UM93_08180 PF01556 DnaJ C terminal domain UM93_08180 PF00226 DnaJ domain UM93_08185 PF00588 SpoU rRNA Methylase family UM93_08190 PF13847 Methyltransferase domain UM93_08200 PF04542 Sigma-70 region 2 UM93_08200 PF04545 Sigma-70, region 4 UM93_08205 PF10099 Anti-sigma-K factor rskA UM93_08210 PF13411 MerR HTH family regulatory protein UM93_08210 PF07739 TipAS antibiotic-recognition domain UM93_08215 PF00766 Electron transfer flavoprotein FAD-binding domain UM93_08215 PF01012 Electron transfer flavoprotein domain UM93_08220 PF01012 Electron transfer flavoprotein domain UM93_08235 PF13180 PDZ domain UM93_08250 PF04012 PspA/IM30 family UM93_08265 PF02096 60Kd inner membrane protein UM93_08275 PF03441 FAD binding domain of DNA photolyase UM93_08275 PF00875 DNA photolyase UM93_08315 PF13180 PDZ domain UM93_08315 PF05362 Lon protease (S16) C-terminal proteolytic domain UM93_08330 PF13361 UvrD-like helicase C-terminal domain UM93_08330 PF00580 UvrD/REP helicase N-terminal domain UM93_08330 PF00570 HRDC domain UM93_08335 PF09297 NADH pyrophosphatase zinc ribbon domain UM93_08335 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain UM93_08335 PF00293 NUDIX domain UM93_08345 PF00580 UvrD/REP helicase N-terminal domain UM93_08345 PF13361 UvrD-like helicase C-terminal domain UM93_08365 PF00497 Bacterial extracellular solute-binding proteins, family 3 UM93_08370 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08375 PF00005 ABC transporter UM93_08380 PF06441 Epoxide hydrolase N terminus UM93_08395 PF00561 alpha/beta hydrolase fold UM93_08400 PF00440 Bacterial regulatory proteins, tetR family UM93_08405 PF00202 Aminotransferase class-III UM93_08410 PF00296 Luciferase-like monooxygenase UM93_08415 PF00490 Delta-aminolevulinic acid dehydratase UM93_08425 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UM93_08425 PF03900 Porphobilinogen deaminase, C-terminal domain UM93_08455 PF00899 ThiF family UM93_08455 PF00581 Rhodanese-like domain UM93_08460 PF00440 Bacterial regulatory proteins, tetR family UM93_08460 PF08362 YcdC-like protein, C-terminal region UM93_08475 PF05690 Thiazole biosynthesis protein ThiG UM93_08505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UM93_08510 PF00271 Helicase conserved C-terminal domain UM93_08510 PF00270 DEAD/DEAH box helicase UM93_08515 PF01555 DNA methylase UM93_08525 PF01032 FecCD transport family UM93_08530 PF01497 Periplasmic binding protein UM93_08545 PF02811 PHP domain UM93_08550 PF00557 Metallopeptidase family M24 UM93_08550 PF05195 Aminopeptidase P, N-terminal domain UM93_08570 PF03448 MgtE intracellular N domain UM93_08570 PF00571 CBS domain UM93_08570 PF01769 Divalent cation transporter UM93_08580 PF10609 NUBPL iron-transfer P-loop NTPase UM93_08580 PF01883 Iron-sulfur cluster assembly protein UM93_08585 PF02416 mttA/Hcf106 family UM93_08595 PF04542 Sigma-70 region 2 UM93_08595 PF08281 Sigma-70, region 4 UM93_08600 PF01596 O-methyltransferase UM93_08615 PF00958 GMP synthase C terminal domain UM93_08615 PF00117 Glutamine amidotransferase class-I UM93_08615 PF03352 Methyladenine glycosylase UM93_08615 PF13302 Acetyltransferase (GNAT) domain UM93_08615 PF13673 Acetyltransferase (GNAT) domain UM93_08630 PF00005 ABC transporter UM93_08635 PF00497 Bacterial extracellular solute-binding proteins, family 3 UM93_08640 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08645 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08660 PF07687 Peptidase dimerisation domain UM93_08660 PF01546 Peptidase family M20/M25/M40 UM93_08665 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle UM93_08665 PF14602 Hexapeptide repeat of succinyl-transferase UM93_08680 PF00285 Citrate synthase, C-terminal domain UM93_08685 PF00155 Aminotransferase class I and II UM93_08690 PF00037 4Fe-4S binding domain UM93_08700 PF08543 Phosphomethylpyrimidine kinase UM93_08705 PF02585 GlcNAc-PI de-N-acetylase UM93_08720 PF00005 ABC transporter UM93_08720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UM93_08725 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08725 PF12911 N-terminal TM domain of oligopeptide transport permease C UM93_08730 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UM93_08755 PF13302 Acetyltransferase (GNAT) domain UM93_08765 PF01926 50S ribosome-binding GTPase UM93_08765 PF06071 Protein of unknown function (DUF933) UM93_08770 PF02646 RmuC family UM93_08775 PF02401 LytB protein UM93_08785 PF02601 Exonuclease VII, large subunit UM93_08785 PF13742 OB-fold nucleic acid binding domain UM93_08790 PF02609 Exonuclease VII small subunit UM93_08795 PF03976 Polyphosphate kinase 2 (PPK2) UM93_08810 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08815 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08820 PF00005 ABC transporter UM93_08820 PF00571 CBS domain UM93_08840 PF13520 Amino acid permease UM93_08850 PF02545 Maf-like protein UM93_08850 PF00293 NUDIX domain UM93_08855 PF05726 Pirin C-terminal cupin domain UM93_08855 PF02678 Pirin UM93_08860 PF01869 BadF/BadG/BcrA/BcrD ATPase family UM93_08865 PF03060 Nitronate monooxygenase UM93_08870 PF01037 Lrp/AsnC ligand binding domain UM93_08885 PF01544 CorA-like Mg2+ transporter protein UM93_08895 PF00248 Aldo/keto reductase family UM93_08900 PF00248 Aldo/keto reductase family UM93_08905 PF17926 Tetracyclin repressor-like, C-terminal domain UM93_08905 PF00440 Bacterial regulatory proteins, tetR family UM93_08910 PF00106 short chain dehydrogenase UM93_08935 PF00528 Binding-protein-dependent transport system inner membrane component UM93_08945 PF12849 PBP superfamily domain UM93_08955 PF00005 ABC transporter UM93_08980 PF02656 Domain of unknown function (DUF202) UM93_09015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_09015 PF03466 LysR substrate binding domain UM93_09055 PF09278 MerR, DNA binding UM93_09055 PF00376 MerR family regulatory protein UM93_09100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UM93_09100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UM93_09105 PF01638 HxlR-like helix-turn-helix UM93_09130 PF00483 Nucleotidyl transferase UM93_09155 PF00117 Glutamine amidotransferase class-I UM93_09155 PF00958 GMP synthase C terminal domain UM93_09155 PF02540 NAD synthase UM93_09160 PF12823 Domain of unknown function (DUF3817) UM93_09170 PF00005 ABC transporter UM93_09170 PF00664 ABC transporter transmembrane region UM93_09175 PF00005 ABC transporter UM93_09175 PF00664 ABC transporter transmembrane region UM93_09210 PF00478 IMP dehydrogenase / GMP reductase domain UM93_09215 PF00571 CBS domain UM93_09215 PF00478 IMP dehydrogenase / GMP reductase domain UM93_09225 PF01757 Acyltransferase family UM93_09230 PF00118 TCP-1/cpn60 chaperonin family UM93_09235 PF00166 Chaperonin 10 Kd subunit UM93_09245 PF08501 Shikimate dehydrogenase substrate binding domain UM93_09250 PF00444 Ribosomal protein L36 UM93_09255 PF02492 CobW/HypB/UreG, nucleotide-binding domain UM93_09255 PF07683 Cobalamin synthesis protein cobW C-terminal domain UM93_09260 PF04107 Glutamate-cysteine ligase family 2(GCS2) UM93_09265 PF00814 Glycoprotease family UM93_09275 PF00814 Glycoprotease family UM93_09285 PF08240 Alcohol dehydrogenase GroES-like domain UM93_09285 PF00107 Zinc-binding dehydrogenase UM93_09290 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE UM93_09295 PF00842 Alanine racemase, C-terminal domain UM93_09295 PF01168 Alanine racemase, N-terminal domain UM93_09305 PF02056 Family 4 glycosyl hydrolase UM93_09305 PF11975 Family 4 glycosyl hydrolase C-terminal domain UM93_09315 PF00528 Binding-protein-dependent transport system inner membrane component UM93_09320 PF00528 Binding-protein-dependent transport system inner membrane component UM93_09325 PF13439 Glycosyltransferase Family 4 UM93_09325 PF00534 Glycosyl transferases group 1 UM93_09330 PF01268 Formate--tetrahydrofolate ligase UM93_09335 PF01658 Myo-inositol-1-phosphate synthase UM93_09340 PF00248 Aldo/keto reductase family UM93_09345 PF00356 Bacterial regulatory proteins, lacI family UM93_09350 PF00128 Alpha amylase, catalytic domain UM93_09350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UM93_09370 PF01571 Aminomethyltransferase folate-binding domain UM93_09370 PF08669 Glycine cleavage T-protein C-terminal barrel domain UM93_09375 PF01597 Glycine cleavage H-protein UM93_09380 PF00464 Serine hydroxymethyltransferase UM93_09385 PF03313 Serine dehydratase alpha chain UM93_09385 PF03315 Serine dehydratase beta chain UM93_09405 PF03853 YjeF-related protein N-terminus UM93_09405 PF01256 Carbohydrate kinase UM93_09410 PF01648 4'-phosphopantetheinyl transferase superfamily UM93_09430 PF01380 SIS domain UM93_09435 PF00485 Phosphoribulokinase / Uridine kinase family UM93_09445 PF01741 Large-conductance mechanosensitive channel, MscL UM93_09450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UM93_09450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UM93_09450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UM93_09450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UM93_09455 PF00380 Ribosomal protein S9/S16 UM93_09460 PF00572 Ribosomal protein L13 UM93_09465 PF01416 tRNA pseudouridine synthase UM93_09470 PF01196 Ribosomal protein L17 UM93_09475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UM93_09475 PF01000 RNA polymerase Rpb3/RpoA insert domain UM93_09475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UM93_09480 PF00411 Ribosomal protein S11 UM93_09485 PF00416 Ribosomal protein S13/S18 UM93_09490 PF00444 Ribosomal protein L36 UM93_09495 PF01176 Translation initiation factor 1A / IF-1 UM93_09500 PF03576 Peptidase family S58 UM93_09505 PF00528 Binding-protein-dependent transport system inner membrane component UM93_09510 PF00528 Binding-protein-dependent transport system inner membrane component UM93_09520 PF00557 Metallopeptidase family M24 UM93_09525 PF02770 Acyl-CoA dehydrogenase, middle domain UM93_09525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UM93_09525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UM93_09540 PF13452 N-terminal half of MaoC dehydratase UM93_09545 PF02803 Thiolase, C-terminal domain UM93_09545 PF00108 Thiolase, N-terminal domain UM93_09550 PF00440 Bacterial regulatory proteins, tetR family UM93_09555 PF00501 AMP-binding enzyme UM93_09555 PF13193 AMP-binding enzyme C-terminal domain UM93_09560 PF00135 Carboxylesterase family UM93_09585 PF00344 SecY translocase UM93_09590 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UM93_09595 PF00327 Ribosomal protein L30p/L7e UM93_09600 PF03719 Ribosomal protein S5, C-terminal domain UM93_09600 PF00333 Ribosomal protein S5, N-terminal domain UM93_09605 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast UM93_09610 PF00347 Ribosomal protein L6 UM93_09615 PF00410 Ribosomal protein S8 UM93_09620 PF00281 Ribosomal protein L5 UM93_09620 PF00673 ribosomal L5P family C-terminus UM93_09625 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UM93_09630 PF00238 Ribosomal protein L14p/L23e UM93_09650 PF03435 Saccharopine dehydrogenase NADP binding domain UM93_09655 PF00501 AMP-binding enzyme UM93_09655 PF13193 AMP-binding enzyme C-terminal domain UM93_09665 PF00366 Ribosomal protein S17 UM93_09670 PF00831 Ribosomal L29 protein UM93_09675 PF00252 Ribosomal protein L16p/L10e UM93_09680 PF00189 Ribosomal protein S3, C-terminal domain UM93_09680 PF07650 KH domain UM93_09685 PF00237 Ribosomal protein L22p/L17e UM93_09690 PF00203 Ribosomal protein S19 UM93_09695 PF03947 Ribosomal Proteins L2, C-terminal domain UM93_09695 PF00181 Ribosomal Proteins L2, RNA binding domain UM93_09700 PF00276 Ribosomal protein L23 UM93_09705 PF00573 Ribosomal protein L4/L1 family UM93_09710 PF00297 Ribosomal protein L3 UM93_09715 PF00338 Ribosomal protein S10p/S20e UM93_09725 PF03737 Aldolase/RraA UM93_09745 PF07690 Major Facilitator Superfamily UM93_09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_09750 PF03466 LysR substrate binding domain UM93_09755 PF03143 Elongation factor Tu C-terminal domain UM93_09755 PF03144 Elongation factor Tu domain 2 UM93_09755 PF00009 Elongation factor Tu GTP binding domain UM93_09760 PF00009 Elongation factor Tu GTP binding domain UM93_09760 PF03764 Elongation factor G, domain IV UM93_09760 PF03144 Elongation factor Tu domain 2 UM93_09760 PF00679 Elongation factor G C-terminus UM93_09760 PF14492 Elongation Factor G, domain II UM93_09765 PF00177 Ribosomal protein S7p/S5e UM93_09770 PF00164 Ribosomal protein S12/S23 UM93_09775 PF04231 Endonuclease I UM93_09780 PF00528 Binding-protein-dependent transport system inner membrane component UM93_09785 PF00528 Binding-protein-dependent transport system inner membrane component UM93_09790 PF00005 ABC transporter UM93_09790 PF08402 TOBE domain UM93_09795 PF01547 Bacterial extracellular solute-binding protein UM93_09800 PF01266 FAD dependent oxidoreductase UM93_09820 PF07690 Major Facilitator Superfamily UM93_09835 PF04998 RNA polymerase Rpb1, domain 5 UM93_09835 PF05000 RNA polymerase Rpb1, domain 4 UM93_09835 PF04983 RNA polymerase Rpb1, domain 3 UM93_09835 PF00623 RNA polymerase Rpb1, domain 2 UM93_09835 PF04997 RNA polymerase Rpb1, domain 1 UM93_09840 PF04561 RNA polymerase Rpb2, domain 2 UM93_09840 PF04563 RNA polymerase beta subunit UM93_09840 PF00562 RNA polymerase Rpb2, domain 6 UM93_09840 PF04565 RNA polymerase Rpb2, domain 3 UM93_09840 PF10385 RNA polymerase beta subunit external 1 domain UM93_09840 PF04560 RNA polymerase Rpb2, domain 7 UM93_09865 PF02803 Thiolase, C-terminal domain UM93_09865 PF00108 Thiolase, N-terminal domain UM93_09870 PF03129 Anticodon binding domain UM93_09870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UM93_09870 PF04073 Aminoacyl-tRNA editing domain UM93_09885 PF00356 Bacterial regulatory proteins, lacI family UM93_09895 PF00528 Binding-protein-dependent transport system inner membrane component UM93_09900 PF00528 Binding-protein-dependent transport system inner membrane component UM93_09910 PF00542 Ribosomal protein L7/L12 C-terminal domain UM93_09910 PF16320 Ribosomal protein L7/L12 dimerisation domain UM93_09915 PF00466 Ribosomal protein L10 UM93_09950 PF00687 Ribosomal protein L1p/L10e family UM93_09955 PF00298 Ribosomal protein L11, RNA binding domain UM93_09955 PF03946 Ribosomal protein L11, N-terminal domain UM93_09960 PF02357 Transcription termination factor nusG UM93_09965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex UM93_09975 PF00155 Aminotransferase class I and II UM93_09980 PF00072 Response regulator receiver domain UM93_09980 PF00196 Bacterial regulatory proteins, luxR family UM93_10005 PF00365 Phosphofructokinase UM93_10020 PF08768 Domain of unknown function (DUF1794) UM93_10030 PF00486 Transcriptional regulatory protein, C terminal UM93_10035 PF13508 Acetyltransferase (GNAT) domain UM93_10035 PF00583 Acetyltransferase (GNAT) family UM93_10040 PF02503 Polyphosphate kinase middle domain UM93_10040 PF13089 Polyphosphate kinase N-terminal domain UM93_10040 PF17941 Polyphosphate kinase C-terminal domain 1 UM93_10040 PF13090 Polyphosphate kinase C-terminal domain 2 UM93_10045 PF00293 NUDIX domain UM93_10045 PF00300 Histidine phosphatase superfamily (branch 1) UM93_10060 PF00303 Thymidylate synthase UM93_10065 PF00186 Dihydrofolate reductase UM93_10070 PF01118 Semialdehyde dehydrogenase, NAD binding domain UM93_10070 PF02774 Semialdehyde dehydrogenase, dimerisation domain UM93_10080 PF01022 Bacterial regulatory protein, arsR family UM93_10100 PF13192 Thioredoxin domain UM93_10100 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_10125 PF00005 ABC transporter UM93_10135 PF01565 FAD binding domain UM93_10135 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UM93_10140 PF07690 Major Facilitator Superfamily UM93_10150 PF13452 N-terminal half of MaoC dehydratase UM93_10165 PF00067 Cytochrome P450 UM93_10170 PF00155 Aminotransferase class I and II UM93_10175 PF00202 Aminotransferase class-III UM93_10180 PF04055 Radical SAM superfamily UM93_10180 PF06968 Biotin and Thiamin Synthesis associated domain UM93_10190 PF03466 LysR substrate binding domain UM93_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_10210 PF07690 Major Facilitator Superfamily UM93_10225 PF13280 WYL domain UM93_10235 PF03328 HpcH/HpaI aldolase/citrate lyase family UM93_10245 PF01156 Inosine-uridine preferring nucleoside hydrolase UM93_10270 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family UM93_10285 PF01638 HxlR-like helix-turn-helix UM93_10320 PF00270 DEAD/DEAH box helicase UM93_10320 PF00271 Helicase conserved C-terminal domain UM93_10320 PF03880 DbpA RNA binding domain UM93_10325 PF03473 MOSC domain UM93_10330 PF00144 Beta-lactamase UM93_10335 PF00072 Response regulator receiver domain UM93_10335 PF00486 Transcriptional regulatory protein, C terminal UM93_10340 PF13493 Domain of unknown function (DUF4118) UM93_10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_10340 PF00582 Universal stress protein family UM93_10340 PF00512 His Kinase A (phospho-acceptor) domain UM93_10340 PF02702 Osmosensitive K+ channel His kinase sensor domain UM93_10350 PF02669 K+-transporting ATPase, c chain UM93_10360 PF03814 Potassium-transporting ATPase A subunit UM93_10370 PF13520 Amino acid permease UM93_10375 PF03576 Peptidase family S58 UM93_10380 PF01979 Amidohydrolase family UM93_10385 PF02770 Acyl-CoA dehydrogenase, middle domain UM93_10385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UM93_10385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UM93_10395 PF01381 Helix-turn-helix UM93_10400 PF00698 Acyl transferase domain UM93_10400 PF00550 Phosphopantetheine attachment site UM93_10400 PF08240 Alcohol dehydrogenase GroES-like domain UM93_10400 PF08990 Erythronolide synthase docking UM93_10400 PF14765 Polyketide synthase dehydratase UM93_10400 PF08659 KR domain UM93_10400 PF02801 Beta-ketoacyl synthase, C-terminal domain UM93_10400 PF00109 Beta-ketoacyl synthase, N-terminal domain UM93_10400 PF16197 Ketoacyl-synthetase C-terminal extension UM93_10410 PF00089 Trypsin UM93_10420 PF01638 HxlR-like helix-turn-helix UM93_10425 PF01053 Cys/Met metabolism PLP-dependent enzyme UM93_10430 PF00291 Pyridoxal-phosphate dependent enzyme UM93_10430 PF00571 CBS domain UM93_10435 PF07687 Peptidase dimerisation domain UM93_10435 PF01546 Peptidase family M20/M25/M40 UM93_10445 PF01139 tRNA-splicing ligase RtcB UM93_10450 PF02040 Arsenical pump membrane protein UM93_10465 PF00085 Thioredoxin UM93_10470 PF02308 MgtC family UM93_10475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UM93_10485 PF17933 Tetracyclin repressor-like, C-terminal domain UM93_10485 PF00440 Bacterial regulatory proteins, tetR family UM93_10490 PF00005 ABC transporter UM93_10490 PF13732 Domain of unknown function (DUF4162) UM93_10500 PF07690 Major Facilitator Superfamily UM93_10510 PF07690 Major Facilitator Superfamily UM93_10540 PF04461 Protein of unknown function (DUF520) UM93_10555 PF00072 Response regulator receiver domain UM93_10555 PF00196 Bacterial regulatory proteins, luxR family UM93_10570 PF05977 Transmembrane secretion effector UM93_10585 PF01475 Ferric uptake regulator family UM93_10590 PF06628 Catalase-related immune-responsive UM93_10590 PF00199 Catalase UM93_10605 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_10615 PF14572 Phosphoribosyl synthetase-associated domain UM93_10615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UM93_10620 PF00582 Universal stress protein family UM93_10625 PF00202 Aminotransferase class-III UM93_10630 PF00171 Aldehyde dehydrogenase family UM93_10640 PF04151 Bacterial pre-peptidase C-terminal domain UM93_10640 PF09286 Pro-kumamolisin, activation domain UM93_10645 PF00512 His Kinase A (phospho-acceptor) domain UM93_10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_10650 PF00486 Transcriptional regulatory protein, C terminal UM93_10650 PF00072 Response regulator receiver domain UM93_10655 PF01569 PAP2 superfamily UM93_10660 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_10665 PF10414 Sirohaem synthase dimerisation region UM93_10665 PF14824 Sirohaem biosynthesis protein central UM93_10665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UM93_10675 PF00528 Binding-protein-dependent transport system inner membrane component UM93_10680 PF00005 ABC transporter UM93_10710 PF00009 Elongation factor Tu GTP binding domain UM93_10715 PF01507 Phosphoadenosine phosphosulfate reductase family UM93_10720 PF01507 Phosphoadenosine phosphosulfate reductase family UM93_10725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UM93_10725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UM93_10740 PF03458 UPF0126 domain UM93_10745 PF00326 Prolyl oligopeptidase family UM93_10755 PF00348 Polyprenyl synthetase UM93_10760 PF01494 FAD binding domain UM93_10765 PF01209 ubiE/COQ5 methyltransferase family UM93_10770 PF00425 chorismate binding enzyme UM93_10780 PF00497 Bacterial extracellular solute-binding proteins, family 3 UM93_10790 PF00005 ABC transporter UM93_10795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UM93_10800 PF13378 Enolase C-terminal domain-like UM93_10800 PF18374 Enolase N-terminal domain-like UM93_10840 PF00364 Biotin-requiring enzyme UM93_10840 PF02817 e3 binding domain UM93_10840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UM93_10845 PF02779 Transketolase, pyrimidine binding domain UM93_10845 PF02780 Transketolase, C-terminal domain UM93_10855 PF01037 Lrp/AsnC ligand binding domain UM93_10870 PF00378 Enoyl-CoA hydratase/isomerase UM93_10875 PF00111 2Fe-2S iron-sulfur cluster binding domain UM93_10875 PF00175 Oxidoreductase NAD-binding domain UM93_10875 PF00970 Oxidoreductase FAD-binding domain UM93_10880 PF01883 Iron-sulfur cluster assembly protein UM93_10885 PF05138 Phenylacetic acid catabolic protein UM93_10890 PF06243 Phenylacetic acid degradation B UM93_10895 PF05138 Phenylacetic acid catabolic protein UM93_10900 PF00326 Prolyl oligopeptidase family UM93_10900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain UM93_10910 PF00089 Trypsin UM93_10915 PF13302 Acetyltransferase (GNAT) domain UM93_10920 PF00871 Acetokinase family UM93_10925 PF01515 Phosphate acetyl/butaryl transferase UM93_10925 PF07085 DRTGG domain UM93_10950 PF00440 Bacterial regulatory proteins, tetR family UM93_10950 PF17932 Tetracyclin repressor-like, C-terminal domain UM93_10960 PF00107 Zinc-binding dehydrogenase UM93_10960 PF08240 Alcohol dehydrogenase GroES-like domain UM93_10965 PF01638 HxlR-like helix-turn-helix UM93_10970 PF07690 Major Facilitator Superfamily UM93_10985 PF01575 MaoC like domain UM93_10985 PF00171 Aldehyde dehydrogenase family UM93_10990 PF01209 ubiE/COQ5 methyltransferase family UM93_10995 PF03061 Thioesterase superfamily UM93_11000 PF00704 Glycosyl hydrolases family 18 UM93_11020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UM93_11020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UM93_11025 PF00378 Enoyl-CoA hydratase/isomerase UM93_11030 PF02803 Thiolase, C-terminal domain UM93_11030 PF00108 Thiolase, N-terminal domain UM93_11035 PF00005 ABC transporter UM93_11050 PF00378 Enoyl-CoA hydratase/isomerase UM93_11055 PF00550 Phosphopantetheine attachment site UM93_11055 PF00501 AMP-binding enzyme UM93_11055 PF13193 AMP-binding enzyme C-terminal domain UM93_11055 PF00668 Condensation domain UM93_11055 PF00975 Thioesterase domain UM93_11060 PF01040 UbiA prenyltransferase family UM93_11085 PF00005 ABC transporter UM93_11095 PF01578 Cytochrome C assembly protein UM93_11105 PF02683 Cytochrome C biogenesis protein transmembrane region UM93_11115 PF00300 Histidine phosphatase superfamily (branch 1) UM93_11120 PF04264 YceI-like domain UM93_11135 PF02629 CoA binding domain UM93_11135 PF06971 Putative DNA-binding protein N-terminus UM93_11150 PF12728 Helix-turn-helix domain UM93_11155 PF07729 FCD domain UM93_11155 PF00392 Bacterial regulatory proteins, gntR family UM93_11160 PF01070 FMN-dependent dehydrogenase UM93_11165 PF01022 Bacterial regulatory protein, arsR family UM93_11170 PF00850 Histone deacetylase domain UM93_11175 PF02386 Cation transport protein UM93_11180 PF02080 TrkA-C domain UM93_11180 PF02254 TrkA-N domain UM93_11185 PF03807 NADP oxidoreductase coenzyme F420-dependent UM93_11185 PF14748 Pyrroline-5-carboxylate reductase dimerisation UM93_11190 PF01261 Xylose isomerase-like TIM barrel UM93_11195 PF02541 Ppx/GppA phosphatase family UM93_11200 PF03051 Peptidase C1-like family UM93_11205 PF13368 Topoisomerase C-terminal repeat UM93_11205 PF01751 Toprim domain UM93_11205 PF01131 DNA topoisomerase UM93_11210 PF00072 Response regulator receiver domain UM93_11210 PF00196 Bacterial regulatory proteins, luxR family UM93_11220 PF05175 Methyltransferase small domain UM93_11225 PF01409 tRNA synthetases class II core domain (F) UM93_11225 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UM93_11235 PF00271 Helicase conserved C-terminal domain UM93_11235 PF09369 Domain of unknown function (DUF1998) UM93_11235 PF00270 DEAD/DEAH box helicase UM93_11280 PF16859 Tetracyclin repressor-like, C-terminal domain UM93_11280 PF00440 Bacterial regulatory proteins, tetR family UM93_11285 PF00561 alpha/beta hydrolase fold UM93_11300 PF00730 HhH-GPD superfamily base excision DNA repair protein UM93_11300 PF00633 Helix-hairpin-helix motif UM93_11300 PF10576 Iron-sulfur binding domain of endonuclease III UM93_11310 PF00501 AMP-binding enzyme UM93_11310 PF16177 Acetyl-coenzyme A synthetase N-terminus UM93_11310 PF13193 AMP-binding enzyme C-terminal domain UM93_11320 PF00528 Binding-protein-dependent transport system inner membrane component UM93_11330 PF08220 DeoR-like helix-turn-helix domain UM93_11330 PF00455 DeoR C terminal sensor domain UM93_11345 PF01220 Dehydroquinase class II UM93_11350 PF02674 Colicin V production protein UM93_11355 PF13545 Crp-like helix-turn-helix domain UM93_11355 PF00027 Cyclic nucleotide-binding domain UM93_11370 PF00905 Penicillin binding protein transpeptidase domain UM93_11370 PF00912 Transglycosylase UM93_11375 PF00149 Calcineurin-like phosphoesterase UM93_11380 PF00296 Luciferase-like monooxygenase UM93_11390 PF00005 ABC transporter UM93_11390 PF00664 ABC transporter transmembrane region UM93_11395 PF00005 ABC transporter UM93_11395 PF00664 ABC transporter transmembrane region UM93_11410 PF00528 Binding-protein-dependent transport system inner membrane component UM93_11415 PF00528 Binding-protein-dependent transport system inner membrane component UM93_11430 PF07729 FCD domain UM93_11430 PF00392 Bacterial regulatory proteins, gntR family UM93_11435 PF02770 Acyl-CoA dehydrogenase, middle domain UM93_11435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UM93_11435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UM93_11440 PF13193 AMP-binding enzyme C-terminal domain UM93_11440 PF00501 AMP-binding enzyme UM93_11450 PF00378 Enoyl-CoA hydratase/isomerase UM93_11455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UM93_11455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UM93_11465 PF00171 Aldehyde dehydrogenase family UM93_11470 PF00083 Sugar (and other) transporter UM93_11485 PF01259 SAICAR synthetase UM93_11515 PF00156 Phosphoribosyl transferase domain UM93_11520 PF00586 AIR synthase related protein, N-terminal domain UM93_11520 PF02769 AIR synthase related protein, C-terminal domain UM93_11540 PF10431 C-terminal, D2-small domain, of ClpB protein UM93_11540 PF02861 Clp amino terminal domain, pathogenicity island component UM93_11540 PF17871 AAA lid domain UM93_11540 PF07724 AAA domain (Cdc48 subfamily) UM93_11540 PF00004 ATPase family associated with various cellular activities (AAA) UM93_11560 PF01048 Phosphorylase superfamily UM93_11575 PF00248 Aldo/keto reductase family UM93_11580 PF13520 Amino acid permease UM93_11590 PF05962 HutD UM93_11595 PF00271 Helicase conserved C-terminal domain UM93_11595 PF00270 DEAD/DEAH box helicase UM93_11600 PF01053 Cys/Met metabolism PLP-dependent enzyme UM93_11605 PF07690 Major Facilitator Superfamily UM93_11610 PF02390 Putative methyltransferase UM93_11620 PF13411 MerR HTH family regulatory protein UM93_11625 PF01556 DnaJ C terminal domain UM93_11625 PF00684 DnaJ central domain UM93_11625 PF00226 DnaJ domain UM93_11630 PF01025 GrpE UM93_11635 PF00012 Hsp70 protein UM93_11660 PF01810 LysE type translocator UM93_11665 PF00248 Aldo/keto reductase family UM93_11670 PF08240 Alcohol dehydrogenase GroES-like domain UM93_11670 PF00107 Zinc-binding dehydrogenase UM93_11685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UM93_11695 PF00083 Sugar (and other) transporter UM93_11705 PF00356 Bacterial regulatory proteins, lacI family UM93_11725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UM93_11730 PF00528 Binding-protein-dependent transport system inner membrane component UM93_11740 PF00005 ABC transporter UM93_11740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UM93_11745 PF00561 alpha/beta hydrolase fold UM93_11760 PF01451 Low molecular weight phosphotyrosine protein phosphatase UM93_11765 PF00117 Glutamine amidotransferase class-I UM93_11765 PF00425 chorismate binding enzyme UM93_11765 PF04715 Anthranilate synthase component I, N terminal region UM93_11785 PF00005 ABC transporter UM93_11785 PF00664 ABC transporter transmembrane region UM93_11795 PF00581 Rhodanese-like domain UM93_11800 PF01053 Cys/Met metabolism PLP-dependent enzyme UM93_11805 PF07859 alpha/beta hydrolase fold UM93_11830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UM93_11840 PF00005 ABC transporter UM93_11845 PF09819 ABC-type cobalt transport system, permease component UM93_11905 PF00692 dUTPase UM93_11910 PF03301 Tryptophan 2,3-dioxygenase UM93_11945 PF05977 Transmembrane secretion effector UM93_11950 PF03466 LysR substrate binding domain UM93_11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_11955 PF02223 Thymidylate kinase UM93_11960 PF02261 Aspartate decarboxylase UM93_11970 PF05872 Bacterial protein of unknown function (DUF853) UM93_11980 PF12706 Beta-lactamase superfamily domain UM93_11990 PF00210 Ferritin-like domain UM93_12000 PF00578 AhpC/TSA family UM93_12000 PF17991 Thioredoxin like C-terminal domain UM93_12000 PF02683 Cytochrome C biogenesis protein transmembrane region UM93_12010 PF00216 Bacterial DNA-binding protein UM93_12015 PF00248 Aldo/keto reductase family UM93_12025 PF00253 Ribosomal protein S14p/S29e UM93_12030 PF00471 Ribosomal protein L33 UM93_12035 PF00830 Ribosomal L28 family UM93_12040 PF03600 Citrate transporter UM93_12060 PF00107 Zinc-binding dehydrogenase UM93_12060 PF13823 Alcohol dehydrogenase GroES-associated UM93_12060 PF08240 Alcohol dehydrogenase GroES-like domain UM93_12075 PF00550 Phosphopantetheine attachment site UM93_12080 PF14765 Polyketide synthase dehydratase UM93_12080 PF00698 Acyl transferase domain UM93_12080 PF08240 Alcohol dehydrogenase GroES-like domain UM93_12080 PF00550 Phosphopantetheine attachment site UM93_12080 PF08659 KR domain UM93_12080 PF02801 Beta-ketoacyl synthase, C-terminal domain UM93_12080 PF00107 Zinc-binding dehydrogenase UM93_12080 PF16197 Ketoacyl-synthetase C-terminal extension UM93_12080 PF00109 Beta-ketoacyl synthase, N-terminal domain UM93_12085 PF00550 Phosphopantetheine attachment site UM93_12085 PF14765 Polyketide synthase dehydratase UM93_12085 PF08659 KR domain UM93_12085 PF02801 Beta-ketoacyl synthase, C-terminal domain UM93_12085 PF00109 Beta-ketoacyl synthase, N-terminal domain UM93_12085 PF00698 Acyl transferase domain UM93_12085 PF08240 Alcohol dehydrogenase GroES-like domain UM93_12085 PF16197 Ketoacyl-synthetase C-terminal extension UM93_12100 PF01032 FecCD transport family UM93_12105 PF01032 FecCD transport family UM93_12120 PF13409 Glutathione S-transferase, N-terminal domain UM93_12125 PF07690 Major Facilitator Superfamily UM93_12135 PF05368 NmrA-like family UM93_12150 PF00293 NUDIX domain UM93_12150 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain UM93_12150 PF09297 NADH pyrophosphatase zinc ribbon domain UM93_12155 PF00107 Zinc-binding dehydrogenase UM93_12155 PF08240 Alcohol dehydrogenase GroES-like domain UM93_12165 PF00155 Aminotransferase class I and II UM93_12210 PF07690 Major Facilitator Superfamily UM93_12215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_12215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UM93_12225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UM93_12225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain UM93_12235 PF03358 NADPH-dependent FMN reductase UM93_12240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UM93_12250 PF12911 N-terminal TM domain of oligopeptide transport permease C UM93_12250 PF00528 Binding-protein-dependent transport system inner membrane component UM93_12255 PF00528 Binding-protein-dependent transport system inner membrane component UM93_12260 PF00155 Aminotransferase class I and II UM93_12265 PF00364 Biotin-requiring enzyme UM93_12265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UM93_12265 PF02817 e3 binding domain UM93_12270 PF02779 Transketolase, pyrimidine binding domain UM93_12270 PF02780 Transketolase, C-terminal domain UM93_12275 PF00676 Dehydrogenase E1 component UM93_12280 PF07478 D-ala D-ala ligase C-terminus UM93_12280 PF01820 D-ala D-ala ligase N-terminus UM93_12285 PF00842 Alanine racemase, C-terminal domain UM93_12285 PF01168 Alanine racemase, N-terminal domain UM93_12290 PF00155 Aminotransferase class I and II UM93_12300 PF00206 Lyase UM93_12300 PF08328 Adenylosuccinate lyase C-terminal UM93_12305 PF00107 Zinc-binding dehydrogenase UM93_12305 PF08240 Alcohol dehydrogenase GroES-like domain UM93_12340 PF00326 Prolyl oligopeptidase family UM93_12340 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain UM93_12345 PF00583 Acetyltransferase (GNAT) family UM93_12350 PF01494 FAD binding domain UM93_12390 PF13380 CoA binding domain UM93_12395 PF01053 Cys/Met metabolism PLP-dependent enzyme UM93_12400 PF00296 Luciferase-like monooxygenase UM93_12405 PF00501 AMP-binding enzyme UM93_12405 PF13193 AMP-binding enzyme C-terminal domain UM93_12405 PF16177 Acetyl-coenzyme A synthetase N-terminus UM93_12420 PF00392 Bacterial regulatory proteins, gntR family UM93_12420 PF07729 FCD domain UM93_12430 PF00248 Aldo/keto reductase family UM93_12435 PF05336 L-rhamnose mutarotase UM93_12450 PF02653 Branched-chain amino acid transport system / permease component UM93_12455 PF00005 ABC transporter UM93_12460 PF13378 Enolase C-terminal domain-like UM93_12460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UM93_12475 PF09382 RQC domain UM93_12475 PF16124 RecQ zinc-binding UM93_12475 PF00271 Helicase conserved C-terminal domain UM93_12475 PF00570 HRDC domain UM93_12475 PF00270 DEAD/DEAH box helicase UM93_12480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UM93_12480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UM93_12480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UM93_12480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UM93_12490 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain UM93_12490 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain UM93_12510 PF07690 Major Facilitator Superfamily UM93_12515 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_12515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UM93_12535 PF04261 Dyp-type peroxidase family UM93_12535 PF10518 TAT (twin-arginine translocation) pathway signal sequence UM93_12555 PF00440 Bacterial regulatory proteins, tetR family UM93_12555 PF08361 MAATS-type transcriptional repressor, C-terminal region UM93_12570 PF00300 Histidine phosphatase superfamily (branch 1) UM93_12575 PF00486 Transcriptional regulatory protein, C terminal UM93_12575 PF00072 Response regulator receiver domain UM93_12580 PF00072 Response regulator receiver domain UM93_12580 PF00486 Transcriptional regulatory protein, C terminal UM93_12585 PF00672 HAMP domain UM93_12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_12585 PF00512 His Kinase A (phospho-acceptor) domain UM93_12595 PF01047 MarR family UM93_12610 PF00672 HAMP domain UM93_12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_12610 PF00512 His Kinase A (phospho-acceptor) domain UM93_12615 PF00072 Response regulator receiver domain UM93_12615 PF00486 Transcriptional regulatory protein, C terminal UM93_12630 PF01757 Acyltransferase family UM93_12645 PF14437 MafB19-like deaminase UM93_12650 PF01965 DJ-1/PfpI family UM93_12675 PF00011 Hsp20/alpha crystallin family UM93_12685 PF00378 Enoyl-CoA hydratase/isomerase UM93_12695 PF01614 Bacterial transcriptional regulator UM93_12695 PF09339 IclR helix-turn-helix domain UM93_12720 PF00270 DEAD/DEAH box helicase UM93_12720 PF08494 DEAD/H associated UM93_12720 PF00271 Helicase conserved C-terminal domain UM93_12725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UM93_12725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UM93_12730 PF00849 RNA pseudouridylate synthase UM93_12755 PF00106 short chain dehydrogenase UM93_12815 PF01297 Zinc-uptake complex component A periplasmic UM93_12820 PF01702 Queuine tRNA-ribosyltransferase UM93_12840 PF13520 Amino acid permease UM93_12850 PF01593 Flavin containing amine oxidoreductase UM93_12865 PF02110 Hydroxyethylthiazole kinase family UM93_12870 PF02581 Thiamine monophosphate synthase UM93_12875 PF08543 Phosphomethylpyrimidine kinase UM93_12875 PF03070 TENA/THI-4/PQQC family UM93_12875 PF02581 Thiamine monophosphate synthase UM93_12880 PF00089 Trypsin UM93_12890 PF01638 HxlR-like helix-turn-helix UM93_12900 PF01212 Beta-eliminating lyase UM93_12915 PF16697 Inner membrane component of T3SS, cytoplasmic domain UM93_12930 PF00905 Penicillin binding protein transpeptidase domain UM93_12935 PF00069 Protein kinase domain UM93_12945 PF00117 Glutamine amidotransferase class-I UM93_12955 PF04203 Sortase domain UM93_12960 PF06781 Cell division protein CrgA UM93_12965 PF00285 Citrate synthase, C-terminal domain UM93_12970 PF00285 Citrate synthase, C-terminal domain UM93_12975 PF04185 Phosphoesterase family UM93_12975 PF05506 Domain of unknown function (DUF756) UM93_12980 PF01451 Low molecular weight phosphotyrosine protein phosphatase UM93_13015 PF01872 RibD C-terminal domain UM93_13025 PF00440 Bacterial regulatory proteins, tetR family UM93_13025 PF02909 Tetracyclin repressor-like, C-terminal domain UM93_13065 PF04226 Transglycosylase associated protein UM93_13095 PF01494 FAD binding domain UM93_13095 PF07976 Phenol hydroxylase, C-terminal dimerisation domain UM93_13100 PF04954 Siderophore-interacting protein UM93_13100 PF08021 Siderophore-interacting FAD-binding domain UM93_13105 PF01497 Periplasmic binding protein UM93_13110 PF01032 FecCD transport family UM93_13115 PF01032 FecCD transport family UM93_13120 PF00005 ABC transporter UM93_13150 PF07730 Histidine kinase UM93_13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_13155 PF00196 Bacterial regulatory proteins, luxR family UM93_13155 PF00072 Response regulator receiver domain UM93_13185 PF00795 Carbon-nitrogen hydrolase UM93_13200 PF01979 Amidohydrolase family UM93_13210 PF00664 ABC transporter transmembrane region UM93_13210 PF00005 ABC transporter UM93_13235 PF00893 Small Multidrug Resistance protein UM93_13275 PF02350 UDP-N-acetylglucosamine 2-epimerase UM93_13335 PF00072 Response regulator receiver domain UM93_13335 PF00486 Transcriptional regulatory protein, C terminal UM93_13340 PF02583 Metal-sensitive transcriptional repressor UM93_13345 PF00403 Heavy-metal-associated domain UM93_13350 PF00403 Heavy-metal-associated domain UM93_13375 PF00356 Bacterial regulatory proteins, lacI family UM93_13380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UM93_13380 PF01842 ACT domain UM93_13380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UM93_13385 PF00528 Binding-protein-dependent transport system inner membrane component UM93_13390 PF00528 Binding-protein-dependent transport system inner membrane component UM93_13415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_13415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UM93_13430 PF00211 Adenylate and Guanylate cyclase catalytic domain UM93_13430 PF13191 AAA ATPase domain UM93_13445 PF01694 Rhomboid family UM93_13450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UM93_13460 PF00535 Glycosyl transferase family 2 UM93_13480 PF12089 Transmembrane domain of unknown function (DUF3566) UM93_13485 PF00521 DNA gyrase/topoisomerase IV, subunit A UM93_13485 PF03989 DNA gyrase C-terminal domain, beta-propeller UM93_13490 PF00204 DNA gyrase B UM93_13490 PF01751 Toprim domain UM93_13490 PF00986 DNA gyrase B subunit, carboxyl terminus UM93_13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_13500 PF02463 RecF/RecN/SMC N terminal domain UM93_13505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UM93_13505 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain UM93_13510 PF02768 DNA polymerase III beta subunit, C-terminal domain UM93_13510 PF02767 DNA polymerase III beta subunit, central domain UM93_13510 PF00712 DNA polymerase III beta subunit, N-terminal domain UM93_13515 PF08299 Bacterial dnaA protein helix-turn-helix UM93_13515 PF00308 Bacterial dnaA protein UM93_13520 PF00825 Ribonuclease P UM93_13525 PF01809 Putative membrane protein insertion efficiency factor UM93_13530 PF02096 60Kd inner membrane protein UM93_13535 PF14804 Jag N-terminus UM93_13535 PF01424 R3H domain UM93_13540 PF02527 rRNA small subunit methyltransferase G UM93_13545 PF13614 AAA domain UM93_13550 PF17762 HTH domain found in ParB protein UM93_13550 PF02195 ParB-like nuclease domain UM93_13555 PF00085 Thioredoxin UM93_13560 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_13575 PF00293 NUDIX domain UM93_13580 PF13735 tRNA nucleotidyltransferase domain 2 putative UM93_13580 PF12627 Probable RNA and SrmB- binding site of polymerase A UM93_13580 PF01743 Poly A polymerase head domain UM93_13585 PF00300 Histidine phosphatase superfamily (branch 1) UM93_13605 PF13460 NAD(P)H-binding UM93_13610 PF01638 HxlR-like helix-turn-helix UM93_13620 PF00356 Bacterial regulatory proteins, lacI family UM93_13630 PF12848 ABC transporter UM93_13630 PF00005 ABC transporter UM93_13635 PF00455 DeoR C terminal sensor domain UM93_13635 PF08220 DeoR-like helix-turn-helix domain UM93_13640 PF07690 Major Facilitator Superfamily UM93_13665 PF00072 Response regulator receiver domain UM93_13665 PF00196 Bacterial regulatory proteins, luxR family UM93_13670 PF03109 ABC1 family UM93_13680 PF02127 Aminopeptidase I zinc metalloprotease (M18) UM93_13690 PF00083 Sugar (and other) transporter UM93_13695 PF00398 Ribosomal RNA adenine dimethylase UM93_13700 PF01250 Ribosomal protein S6 UM93_13705 PF00436 Single-strand binding protein family UM93_13710 PF01084 Ribosomal protein S18 UM93_13715 PF03948 Ribosomal protein L9, C-terminal domain UM93_13715 PF01281 Ribosomal protein L9, N-terminal domain UM93_13730 PF00772 DnaB-like helicase N terminal domain UM93_13730 PF03796 DnaB-like helicase C terminal domain UM93_13750 PF00701 Dihydrodipicolinate synthetase family UM93_13755 PF05544 Proline racemase UM93_13760 PF01266 FAD dependent oxidoreductase UM93_13770 PF04324 BFD-like [2Fe-2S] binding domain UM93_13770 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_13775 PF00171 Aldehyde dehydrogenase family UM93_13780 PF07729 FCD domain UM93_13780 PF00392 Bacterial regulatory proteins, gntR family UM93_13785 PF00561 alpha/beta hydrolase fold UM93_13790 PF00557 Metallopeptidase family M24 UM93_13790 PF05195 Aminopeptidase P, N-terminal domain UM93_13800 PF00583 Acetyltransferase (GNAT) family UM93_13820 PF01022 Bacterial regulatory protein, arsR family UM93_13825 PF01554 MatE UM93_13845 PF01380 SIS domain UM93_13850 PF13580 SIS domain UM93_13860 PF00528 Binding-protein-dependent transport system inner membrane component UM93_13865 PF00528 Binding-protein-dependent transport system inner membrane component UM93_13895 PF00528 Binding-protein-dependent transport system inner membrane component UM93_13900 PF00528 Binding-protein-dependent transport system inner membrane component UM93_13915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UM93_13915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UM93_13930 PF01232 Mannitol dehydrogenase Rossmann domain UM93_13930 PF08125 Mannitol dehydrogenase C-terminal domain UM93_13935 PF14579 Helix-hairpin-helix motif UM93_13935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UM93_13935 PF07733 Bacterial DNA polymerase III alpha NTPase domain UM93_13935 PF02811 PHP domain UM93_13940 PF00817 impB/mucB/samB family UM93_13940 PF11798 IMS family HHH motif UM93_13940 PF11799 impB/mucB/samB family C-terminal domain UM93_13960 PF03176 MMPL family UM93_13965 PF00210 Ferritin-like domain UM93_13970 PF01758 Sodium Bile acid symporter family UM93_14000 PF00561 alpha/beta hydrolase fold UM93_14010 PF00294 pfkB family carbohydrate kinase UM93_14015 PF01161 Phosphatidylethanolamine-binding protein UM93_14040 PF02595 Glycerate kinase family UM93_14075 PF01022 Bacterial regulatory protein, arsR family UM93_14080 PF01545 Cation efflux family UM93_14085 PF00750 tRNA synthetases class I (R) UM93_14085 PF05746 DALR anticodon binding domain UM93_14085 PF03485 Arginyl tRNA synthetase N terminal domain UM93_14090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UM93_14090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UM93_14090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UM93_14090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UM93_14100 PF00854 POT family UM93_14105 PF03575 Peptidase family S51 UM93_14110 PF01206 Sulfurtransferase TusA UM93_14110 PF00581 Rhodanese-like domain UM93_14115 PF00800 Prephenate dehydratase UM93_14115 PF01842 ACT domain UM93_14120 PF12464 Maltose acetyltransferase UM93_14120 PF14602 Hexapeptide repeat of succinyl-transferase UM93_14125 PF00781 Diacylglycerol kinase catalytic domain UM93_14130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UM93_14130 PF02403 Seryl-tRNA synthetase N-terminal domain UM93_14160 PF00719 Inorganic pyrophosphatase UM93_14165 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family UM93_14175 PF01171 PP-loop family UM93_14175 PF09179 TilS substrate binding domain UM93_14185 PF01434 Peptidase family M41 UM93_14185 PF17862 AAA+ lid domain UM93_14185 PF00004 ATPase family associated with various cellular activities (AAA) UM93_14190 PF01227 GTP cyclohydrolase I UM93_14195 PF00809 Pterin binding enzyme UM93_14200 PF02152 Dihydroneopterin aldolase UM93_14205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UM93_14230 PF02569 Pantoate-beta-alanine ligase UM93_14235 PF01047 MarR family UM93_14240 PF07690 Major Facilitator Superfamily UM93_14245 PF01336 OB-fold nucleic acid binding domain UM93_14245 PF00152 tRNA synthetases class II (D, K and N) UM93_14250 PF11774 Lsr2 UM93_14255 PF02861 Clp amino terminal domain, pathogenicity island component UM93_14255 PF10431 C-terminal, D2-small domain, of ClpB protein UM93_14255 PF17871 AAA lid domain UM93_14255 PF07724 AAA domain (Cdc48 subfamily) UM93_14255 PF00004 ATPase family associated with various cellular activities (AAA) UM93_14260 PF00756 Putative esterase UM93_14270 PF00326 Prolyl oligopeptidase family UM93_14270 PF07676 WD40-like Beta Propeller Repeat UM93_14275 PF00583 Acetyltransferase (GNAT) family UM93_14280 PF13305 Tetracyclin repressor-like, C-terminal domain UM93_14280 PF00440 Bacterial regulatory proteins, tetR family UM93_14285 PF02733 Dak1 domain UM93_14290 PF02734 DAK2 domain UM93_14295 PF00381 PTS HPr component phosphorylation site UM93_14295 PF05524 PEP-utilising enzyme, N-terminal UM93_14295 PF00391 PEP-utilising enzyme, mobile domain UM93_14295 PF03610 PTS system fructose IIA component UM93_14310 PF00633 Helix-hairpin-helix motif UM93_14310 PF00730 HhH-GPD superfamily base excision DNA repair protein UM93_14330 PF00633 Helix-hairpin-helix motif UM93_14330 PF10635 DisA bacterial checkpoint controller linker region UM93_14330 PF02457 DisA bacterial checkpoint controller nucleotide-binding UM93_14335 PF18073 Rubredoxin metal binding domain UM93_14350 PF12849 PBP superfamily domain UM93_14355 PF00528 Binding-protein-dependent transport system inner membrane component UM93_14360 PF00528 Binding-protein-dependent transport system inner membrane component UM93_14365 PF00005 ABC transporter UM93_14370 PF01384 Phosphate transporter family UM93_14410 PF01381 Helix-turn-helix UM93_14480 PF18755 Restriction Enzyme Adenine Methylase Associated UM93_14480 PF01555 DNA methylase UM93_14710 PF01638 HxlR-like helix-turn-helix UM93_14740 PF08659 KR domain UM93_14740 PF00109 Beta-ketoacyl synthase, N-terminal domain UM93_14740 PF14765 Polyketide synthase dehydratase UM93_14740 PF00550 Phosphopantetheine attachment site UM93_14740 PF00698 Acyl transferase domain UM93_14740 PF02801 Beta-ketoacyl synthase, C-terminal domain UM93_14740 PF08240 Alcohol dehydrogenase GroES-like domain UM93_14740 PF16197 Ketoacyl-synthetase C-terminal extension UM93_14740 PF09277 Erythronolide synthase, docking UM93_14740 PF08990 Erythronolide synthase docking UM93_14750 PF07690 Major Facilitator Superfamily UM93_14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_14755 PF03466 LysR substrate binding domain UM93_14760 PF00089 Trypsin UM93_14815 PF03060 Nitronate monooxygenase UM93_14820 PF00378 Enoyl-CoA hydratase/isomerase UM93_14820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UM93_14820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UM93_14825 PF00108 Thiolase, N-terminal domain UM93_14825 PF02803 Thiolase, C-terminal domain UM93_14835 PF01012 Electron transfer flavoprotein domain UM93_14840 PF01012 Electron transfer flavoprotein domain UM93_14840 PF00766 Electron transfer flavoprotein FAD-binding domain UM93_14855 PF00106 short chain dehydrogenase UM93_14860 PF01636 Phosphotransferase enzyme family UM93_14865 PF00501 AMP-binding enzyme UM93_14865 PF13193 AMP-binding enzyme C-terminal domain UM93_14885 PF08240 Alcohol dehydrogenase GroES-like domain UM93_14885 PF00107 Zinc-binding dehydrogenase UM93_14890 PF00440 Bacterial regulatory proteins, tetR family UM93_14895 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) UM93_14930 PF00083 Sugar (and other) transporter UM93_14935 PF05524 PEP-utilising enzyme, N-terminal UM93_14935 PF00391 PEP-utilising enzyme, mobile domain UM93_14935 PF02896 PEP-utilising enzyme, TIM barrel domain UM93_14960 PF03746 LamB/YcsF family UM93_14965 PF02682 Carboxyltransferase domain, subdomain C and D UM93_14970 PF02626 Carboxyltransferase domain, subdomain A and B UM93_14975 PF04286 Protein of unknown function (DUF445) UM93_14980 PF03009 Glycerophosphoryl diester phosphodiesterase family UM93_14985 PF00723 Glycosyl hydrolases family 15 UM93_14995 PF01910 Thiamine-binding protein UM93_15000 PF01596 O-methyltransferase UM93_15005 PF17284 Spermidine synthase tetramerisation domain UM93_15025 PF00860 Permease family UM93_15030 PF04234 CopC domain UM93_15040 PF01565 FAD binding domain UM93_15040 PF04030 D-arabinono-1,4-lactone oxidase UM93_15050 PF00582 Universal stress protein family UM93_15055 PF00557 Metallopeptidase family M24 UM93_15060 PF00877 NlpC/P60 family UM93_15075 PF00892 EamA-like transporter family UM93_15110 PF07690 Major Facilitator Superfamily UM93_15150 PF01547 Bacterial extracellular solute-binding protein UM93_15155 PF00528 Binding-protein-dependent transport system inner membrane component UM93_15160 PF00528 Binding-protein-dependent transport system inner membrane component UM93_15170 PF00356 Bacterial regulatory proteins, lacI family UM93_15175 PF07681 DoxX UM93_15195 PF00005 ABC transporter UM93_15205 PF02540 NAD synthase UM93_15210 PF00356 Bacterial regulatory proteins, lacI family UM93_15225 PF00528 Binding-protein-dependent transport system inner membrane component UM93_15235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_15235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UM93_15245 PF02614 Glucuronate isomerase UM93_15255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UM93_15255 PF13378 Enolase C-terminal domain-like UM93_15275 PF00156 Phosphoribosyl transferase domain UM93_15280 PF00583 Acetyltransferase (GNAT) family UM93_15295 PF00501 AMP-binding enzyme UM93_15295 PF13193 AMP-binding enzyme C-terminal domain UM93_15295 PF00668 Condensation domain UM93_15295 PF07993 Male sterility protein UM93_15295 PF00550 Phosphopantetheine attachment site UM93_15310 PF00067 Cytochrome P450 UM93_15315 PF00975 Thioesterase domain UM93_15315 PF13193 AMP-binding enzyme C-terminal domain UM93_15315 PF00501 AMP-binding enzyme UM93_15315 PF00668 Condensation domain UM93_15315 PF00550 Phosphopantetheine attachment site UM93_15320 PF02801 Beta-ketoacyl synthase, C-terminal domain UM93_15320 PF16197 Ketoacyl-synthetase C-terminal extension UM93_15320 PF00550 Phosphopantetheine attachment site UM93_15320 PF00109 Beta-ketoacyl synthase, N-terminal domain UM93_15320 PF00698 Acyl transferase domain UM93_15320 PF00668 Condensation domain UM93_15330 PF00975 Thioesterase domain UM93_15345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UM93_15345 PF13378 Enolase C-terminal domain-like UM93_15375 PF13344 Haloacid dehalogenase-like hydrolase UM93_15390 PF01116 Fructose-bisphosphate aldolase class-II UM93_15415 PF00709 Adenylosuccinate synthetase UM93_15420 PF00795 Carbon-nitrogen hydrolase UM93_15430 PF13380 CoA binding domain UM93_15440 PF04237 YjbR UM93_15450 PF00491 Arginase family UM93_15460 PF03372 Endonuclease/Exonuclease/phosphatase family UM93_15470 PF02769 AIR synthase related protein, C-terminal domain UM93_15470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UM93_15470 PF00586 AIR synthase related protein, N-terminal domain UM93_15515 PF00999 Sodium/hydrogen exchanger family UM93_15520 PF01842 ACT domain UM93_15520 PF00696 Amino acid kinase family UM93_15520 PF13840 ACT domain UM93_15525 PF00294 pfkB family carbohydrate kinase UM93_15535 PF12697 Alpha/beta hydrolase family UM93_15540 PF09278 MerR, DNA binding UM93_15540 PF00376 MerR family regulatory protein UM93_15555 PF13662 Toprim domain UM93_15555 PF02132 RecR protein UM93_15560 PF12169 DNA polymerase III subunits gamma and tau domain III UM93_15565 PF00749 tRNA synthetases class I (E and Q), catalytic domain UM93_15590 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system UM93_15600 PF02224 Cytidylate kinase UM93_15605 PF00106 short chain dehydrogenase UM93_15615 PF07690 Major Facilitator Superfamily UM93_15635 PF00255 Glutathione peroxidase UM93_15655 PF00534 Glycosyl transferases group 1 UM93_15655 PF13439 Glycosyltransferase Family 4 UM93_15660 PF00535 Glycosyl transferase family 2 UM93_15695 PF02770 Acyl-CoA dehydrogenase, middle domain UM93_15695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UM93_15695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UM93_15700 PF00550 Phosphopantetheine attachment site UM93_15730 PF00440 Bacterial regulatory proteins, tetR family UM93_15730 PF13977 BetI-type transcriptional repressor, C-terminal UM93_15740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_15740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UM93_15750 PF00480 ROK family UM93_15765 PF01494 FAD binding domain UM93_15780 PF00463 Isocitrate lyase family UM93_15790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UM93_15790 PF02770 Acyl-CoA dehydrogenase, middle domain UM93_15790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UM93_15795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UM93_15795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UM93_15800 PF06314 Acetoacetate decarboxylase (ADC) UM93_15805 PF00378 Enoyl-CoA hydratase/isomerase UM93_15810 PF02515 CoA-transferase family III UM93_15815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UM93_15815 PF03466 LysR substrate binding domain UM93_15825 PF00083 Sugar (and other) transporter UM93_15830 PF00561 alpha/beta hydrolase fold UM93_15835 PF08338 Domain of unknown function (DUF1731) UM93_15835 PF01370 NAD dependent epimerase/dehydratase family UM93_15845 PF07883 Cupin domain UM93_15850 PF02554 Carbon starvation protein CstA UM93_15850 PF13722 5TM C-terminal transporter carbon starvation CstA UM93_15875 PF07730 Histidine kinase UM93_15880 PF00196 Bacterial regulatory proteins, luxR family UM93_15880 PF00072 Response regulator receiver domain UM93_15905 PF10759 Protein of unknown function (DUF2587) UM93_15920 PF00561 alpha/beta hydrolase fold UM93_15925 PF12169 DNA polymerase III subunits gamma and tau domain III UM93_15930 PF02223 Thymidylate kinase UM93_15935 PF01053 Cys/Met metabolism PLP-dependent enzyme UM93_15950 PF00300 Histidine phosphatase superfamily (branch 1) UM93_15955 PF01895 PhoU domain UM93_15965 PF00072 Response regulator receiver domain UM93_15965 PF00486 Transcriptional regulatory protein, C terminal UM93_15975 PF02559 CarD-like/TRCF domain UM93_15980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UM93_15985 PF02542 YgbB family UM93_15995 PF08032 RNA 2'-O ribose methyltransferase substrate binding UM93_15995 PF00588 SpoU rRNA Methylase family UM93_16000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UM93_16000 PF00128 Alpha amylase, catalytic domain UM93_16020 PF11897 Protein of unknown function (DUF3417) UM93_16020 PF00343 Carbohydrate phosphorylase UM93_16030 PF00528 Binding-protein-dependent transport system inner membrane component UM93_16035 PF00528 Binding-protein-dependent transport system inner membrane component UM93_16040 PF11896 Domain of unknown function (DUF3416) UM93_16050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UM93_16050 PF02806 Alpha amylase, C-terminal all-beta domain UM93_16050 PF00128 Alpha amylase, catalytic domain UM93_16055 PF00296 Luciferase-like monooxygenase UM93_16060 PF00221 Aromatic amino acid lyase UM93_16065 PF00571 CBS domain UM93_16065 PF00291 Pyridoxal-phosphate dependent enzyme UM93_16095 PF02913 FAD linked oxidases, C-terminal domain UM93_16095 PF01565 FAD binding domain UM93_16110 PF00005 ABC transporter UM93_16110 PF17912 MalK OB fold domain UM93_16120 PF00982 Glycosyltransferase family 20 UM93_16140 PF00005 ABC transporter UM93_16150 PF03932 CutC family UM93_16165 PF08281 Sigma-70, region 4 UM93_16165 PF04542 Sigma-70 region 2 UM93_16165 PF12680 SnoaL-like domain UM93_16195 PF03780 Asp23 family, cell envelope-related function UM93_16210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UM93_16210 PF06827 Zinc finger found in FPG and IleRS UM93_16215 PF04954 Siderophore-interacting protein UM93_16215 PF08021 Siderophore-interacting FAD-binding domain UM93_16225 PF00232 Glycosyl hydrolase family 1 UM93_16230 PF03167 Uracil DNA glycosylase superfamily UM93_16245 PF13458 Periplasmic binding protein UM93_16255 PF05368 NmrA-like family UM93_16265 PF00118 TCP-1/cpn60 chaperonin family UM93_16270 PF00356 Bacterial regulatory proteins, lacI family UM93_16275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UM93_16275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UM93_16280 PF04545 Sigma-70, region 4 UM93_16280 PF04542 Sigma-70 region 2 UM93_16285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UM93_16285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UM93_16290 PF00075 RNase H UM93_16295 PF00672 HAMP domain UM93_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UM93_16295 PF00512 His Kinase A (phospho-acceptor) domain UM93_16300 PF00486 Transcriptional regulatory protein, C terminal UM93_16300 PF00072 Response regulator receiver domain UM93_16320 PF00313 'Cold-shock' DNA-binding domain UM93_16330 PF00266 Aminotransferase class-V UM93_16335 PF18357 Diphteria toxin repressor SH3 domain UM93_16335 PF02742 Iron dependent repressor, metal binding and dimerisation domain UM93_16335 PF01325 Iron dependent repressor, N-terminal DNA binding domain UM93_16340 PF01551 Peptidase family M23 UM93_16340 PF08525 Opacity-associated protein A N-terminal motif UM93_16340 PF01476 LysM domain UM93_16345 PF00877 NlpC/P60 family UM93_16350 PF01476 LysM domain UM93_16350 PF08239 Bacterial SH3 domain UM93_16350 PF00877 NlpC/P60 family UM93_16370 PF03454 MoeA C-terminal region (domain IV) UM93_16370 PF03453 MoeA N-terminal region (domain I and II) UM93_16370 PF00994 Probable molybdopterin binding domain UM93_16375 PF00384 Molybdopterin oxidoreductase UM93_16375 PF01568 Molydopterin dinucleotide binding domain UM93_16380 PF02634 FdhD/NarQ family UM93_16390 PF13538 UvrD-like helicase C-terminal domain UM93_16395 PF00005 ABC transporter UM93_16400 PF00528 Binding-protein-dependent transport system inner membrane component UM93_16405 PF00497 Bacterial extracellular solute-binding proteins, family 3 UM93_16410 PF00005 ABC transporter UM93_16410 PF00664 ABC transporter transmembrane region UM93_16435 PF08240 Alcohol dehydrogenase GroES-like domain UM93_16435 PF00107 Zinc-binding dehydrogenase UM93_16440 PF07992 Pyridine nucleotide-disulphide oxidoreductase UM93_16465 PF00459 Inositol monophosphatase family UM93_16470 PF13361 UvrD-like helicase C-terminal domain UM93_16470 PF00580 UvrD/REP helicase N-terminal domain UM93_16480 PF08442 ATP-grasp domain UM93_16480 PF00549 CoA-ligase UM93_16485 PF00549 CoA-ligase UM93_16485 PF02629 CoA binding domain UM93_16490 PF00005 ABC transporter UM93_16490 PF00664 ABC transporter transmembrane region UM93_16495 PF00005 ABC transporter UM93_16495 PF00664 ABC transporter transmembrane region UM93_16505 PF00294 pfkB family carbohydrate kinase UM93_16520 PF01261 Xylose isomerase-like TIM barrel UM93_16525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_16535 PF04978 Protein of unknown function (DUF664) UM93_16545 PF04962 KduI/IolB family UM93_16555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_16555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UM93_16565 PF02653 Branched-chain amino acid transport system / permease component UM93_16570 PF00005 ABC transporter UM93_16580 PF07690 Major Facilitator Superfamily UM93_16605 PF00474 Sodium:solute symporter family UM93_16610 PF07883 Cupin domain UM93_16610 PF01381 Helix-turn-helix UM93_16615 PF00690 Cation transporter/ATPase, N-terminus UM93_16615 PF00689 Cation transporting ATPase, C-terminus UM93_16625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UM93_16625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UM93_16625 PF00205 Thiamine pyrophosphate enzyme, central domain UM93_16635 PF03358 NADPH-dependent FMN reductase UM93_16640 PF04226 Transglycosylase associated protein UM93_16655 PF00551 Formyl transferase UM93_16665 PF01380 SIS domain UM93_16665 PF01418 Helix-turn-helix domain, rpiR family UM93_16675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UM93_16675 PF13378 Enolase C-terminal domain-like UM93_16690 PF02016 LD-carboxypeptidase N-terminal domain UM93_16690 PF17676 LD-carboxypeptidase C-terminal domain UM93_16695 PF00005 ABC transporter UM93_16695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UM93_16700 PF12911 N-terminal TM domain of oligopeptide transport permease C UM93_16700 PF00528 Binding-protein-dependent transport system inner membrane component UM93_16705 PF00528 Binding-protein-dependent transport system inner membrane component UM93_16710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UM93_16715 PF01546 Peptidase family M20/M25/M40 UM93_16715 PF07687 Peptidase dimerisation domain UM93_16725 PF01380 SIS domain UM93_16730 PF01380 SIS domain UM93_16730 PF01418 Helix-turn-helix domain, rpiR family UM93_16740 PF02142 MGS-like domain UM93_16740 PF01808 AICARFT/IMPCHase bienzyme UM93_16755 PF00180 Isocitrate/isopropylmalate dehydrogenase UM93_16760 PF13458 Periplasmic binding protein UM93_16765 PF02653 Branched-chain amino acid transport system / permease component UM93_16770 PF02653 Branched-chain amino acid transport system / permease component UM93_16770 PF11862 Domain of unknown function (DUF3382) UM93_16775 PF00005 ABC transporter UM93_16775 PF12399 Branched-chain amino acid ATP-binding cassette transporter UM93_16780 PF00005 ABC transporter UM93_16785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UM93_16795 PF13407 Periplasmic binding protein domain UM93_16800 PF02653 Branched-chain amino acid transport system / permease component UM93_16805 PF00005 ABC transporter UM93_16810 PF00480 ROK family UM93_16810 PF01047 MarR family UM93_16820 PF00132 Bacterial transferase hexapeptide (six repeats) UM93_16825 PF00551 Formyl transferase UM93_16845 PF00464 Serine hydroxymethyltransferase UM93_16850 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UM93_16850 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UM93_16855 PF07730 Histidine kinase UM93_16860 PF00072 Response regulator receiver domain UM93_16860 PF00196 Bacterial regulatory proteins, luxR family UM93_16870 PF07669 Eco57I restriction-modification methylase UM93_16905 PF01815 Rop protein UM93_16920 PF07690 Major Facilitator Superfamily