locus-tag class description NtRootA1_00010 PF00308 Bacterial dnaA protein NtRootA1_00010 PF08299 Bacterial dnaA protein helix-turn-helix NtRootA1_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain NtRootA1_00020 PF02767 DNA polymerase III beta subunit, central domain NtRootA1_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain NtRootA1_00030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NtRootA1_00030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA1_00040 PF02463 RecF/RecN/SMC N terminal domain NtRootA1_00050 PF05258 Dna[CI] antecedent, DciA NtRootA1_00060 PF01751 Toprim domain NtRootA1_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_00060 PF00204 DNA gyrase B NtRootA1_00060 PF00986 DNA gyrase B subunit, carboxyl terminus NtRootA1_00070 PF03989 DNA gyrase C-terminal domain, beta-propeller NtRootA1_00070 PF00521 DNA gyrase/topoisomerase IV, subunit A NtRootA1_00100 PF00963 Cohesin domain NtRootA1_00100 PF00754 F5/8 type C domain NtRootA1_00100 PF00041 Fibronectin type III domain NtRootA1_00100 PF02838 Glycosyl hydrolase family 20, domain 2 NtRootA1_00100 PF07555 beta-N-acetylglucosaminidase NtRootA1_00140 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NtRootA1_00150 PF01694 Rhomboid family NtRootA1_00180 PF03352 Methyladenine glycosylase NtRootA1_00200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NtRootA1_00200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NtRootA1_00210 PF04542 Sigma-70 region 2 NtRootA1_00210 PF04545 Sigma-70, region 4 NtRootA1_00220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NtRootA1_00220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NtRootA1_00230 PF06781 Cell division protein CrgA NtRootA1_00240 PF04203 Sortase domain NtRootA1_00250 PF00117 Glutamine amidotransferase class-I NtRootA1_00260 PF03793 PASTA domain NtRootA1_00260 PF00069 Protein kinase domain NtRootA1_00270 PF00069 Protein kinase domain NtRootA1_00280 PF00905 Penicillin binding protein transpeptidase domain NtRootA1_00290 PF01098 Cell cycle protein NtRootA1_00310 PF16697 Inner membrane component of T3SS, cytoplasmic domain NtRootA1_00320 PF12401 Protein of unknown function (DUF2662) NtRootA1_00320 PF00498 FHA domain NtRootA1_00330 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_00340 PF13378 Enolase C-terminal domain-like NtRootA1_00340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA1_00360 PF01593 Flavin containing amine oxidoreductase NtRootA1_00380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA1_00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_00400 PF03466 LysR substrate binding domain NtRootA1_00410 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_00410 PF07729 FCD domain NtRootA1_00420 PF03746 LamB/YcsF family NtRootA1_00430 PF07690 Major Facilitator Superfamily NtRootA1_00430 PF00083 Sugar (and other) transporter NtRootA1_00440 PF02626 Carboxyltransferase domain, subdomain A and B NtRootA1_00450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA1_00450 PF00364 Biotin-requiring enzyme NtRootA1_00450 PF00289 Biotin carboxylase, N-terminal domain NtRootA1_00450 PF02785 Biotin carboxylase C-terminal domain NtRootA1_00460 PF01565 FAD binding domain NtRootA1_00460 PF04030 D-arabinono-1,4-lactone oxidase NtRootA1_00470 PF01758 Sodium Bile acid symporter family NtRootA1_00480 PF00916 Sulfate permease family NtRootA1_00480 PF01740 STAS domain NtRootA1_00510 PF00294 pfkB family carbohydrate kinase NtRootA1_00520 PF01161 Phosphatidylethanolamine-binding protein NtRootA1_00560 PF03009 Glycerophosphoryl diester phosphodiesterase family NtRootA1_00570 PF16355 Domain of unknown function (DUF4982) NtRootA1_00570 PF00703 Glycosyl hydrolases family 2 NtRootA1_00570 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootA1_00570 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootA1_00580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_00580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_00580 PF01842 ACT domain NtRootA1_00590 PF02595 Glycerate kinase family NtRootA1_00600 PF10944 Protein of unknown function (DUF2630) NtRootA1_00620 PF00155 Aminotransferase class I and II NtRootA1_00620 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_00630 PF01261 Xylose isomerase-like TIM barrel NtRootA1_00640 PF07690 Major Facilitator Superfamily NtRootA1_00650 PF01872 RibD C-terminal domain NtRootA1_00660 PF01965 DJ-1/PfpI family NtRootA1_00680 PF13443 Cro/C1-type HTH DNA-binding domain NtRootA1_00690 PF00860 Permease family NtRootA1_00700 PF00881 Nitroreductase family NtRootA1_00720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA1_00720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA1_00720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA1_00720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA1_00740 PF00854 POT family NtRootA1_00750 PF01425 Amidase NtRootA1_00760 PF03575 Peptidase family S51 NtRootA1_00770 PF00581 Rhodanese-like domain NtRootA1_00770 PF01206 Sulfurtransferase TusA NtRootA1_00780 PF01842 ACT domain NtRootA1_00780 PF00800 Prephenate dehydratase NtRootA1_00800 PF00781 Diacylglycerol kinase catalytic domain NtRootA1_00810 PF02403 Seryl-tRNA synthetase N-terminal domain NtRootA1_00810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA1_00840 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootA1_00860 PF04545 Sigma-70, region 4 NtRootA1_00860 PF04542 Sigma-70 region 2 NtRootA1_00860 PF04539 Sigma-70 region 3 NtRootA1_00890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NtRootA1_00910 PF13439 Glycosyltransferase Family 4 NtRootA1_00910 PF00534 Glycosyl transferases group 1 NtRootA1_00920 PF13580 SIS domain NtRootA1_00930 PF01467 Cytidylyltransferase-like NtRootA1_00930 PF00294 pfkB family carbohydrate kinase NtRootA1_00940 PF00106 short chain dehydrogenase NtRootA1_00960 PF01467 Cytidylyltransferase-like NtRootA1_00960 PF00294 pfkB family carbohydrate kinase NtRootA1_01070 PF00719 Inorganic pyrophosphatase NtRootA1_01080 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NtRootA1_01110 PF01171 PP-loop family NtRootA1_01110 PF09179 TilS substrate binding domain NtRootA1_01120 PF00156 Phosphoribosyl transferase domain NtRootA1_01130 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_01140 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_01140 PF17862 AAA+ lid domain NtRootA1_01140 PF01434 Peptidase family M41 NtRootA1_01150 PF01227 GTP cyclohydrolase I NtRootA1_01160 PF00809 Pterin binding enzyme NtRootA1_01170 PF02152 Dihydroneopterin aldolase NtRootA1_01180 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NtRootA1_01230 PF02569 Pantoate-beta-alanine ligase NtRootA1_01250 PF07690 Major Facilitator Superfamily NtRootA1_01310 PF00152 tRNA synthetases class II (D, K and N) NtRootA1_01310 PF01336 OB-fold nucleic acid binding domain NtRootA1_01330 PF11774 Lsr2 NtRootA1_01340 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_01340 PF07724 AAA domain (Cdc48 subfamily) NtRootA1_01340 PF17871 AAA lid domain NtRootA1_01340 PF02861 Clp amino terminal domain, pathogenicity island component NtRootA1_01340 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA1_01350 PF03033 Glycosyltransferase family 28 N-terminal domain NtRootA1_01360 PF00326 Prolyl oligopeptidase family NtRootA1_01360 PF07676 WD40-like Beta Propeller Repeat NtRootA1_01360 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NtRootA1_01370 PF00583 Acetyltransferase (GNAT) family NtRootA1_01380 PF01565 FAD binding domain NtRootA1_01380 PF08031 Berberine and berberine like NtRootA1_01400 PF02733 Dak1 domain NtRootA1_01410 PF02734 DAK2 domain NtRootA1_01420 PF03610 PTS system fructose IIA component NtRootA1_01430 PF05532 CsbD-like NtRootA1_01500 PF00633 Helix-hairpin-helix motif NtRootA1_01500 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootA1_01520 PF02457 DisA bacterial checkpoint controller nucleotide-binding NtRootA1_01520 PF10635 DisA bacterial checkpoint controller linker region NtRootA1_01520 PF00633 Helix-hairpin-helix motif NtRootA1_01530 PF18073 Rubredoxin metal binding domain NtRootA1_01540 PF01569 PAP2 superfamily NtRootA1_01560 PF12849 PBP superfamily domain NtRootA1_01570 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_01580 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_01590 PF00005 ABC transporter NtRootA1_01600 PF01384 Phosphate transporter family NtRootA1_01630 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NtRootA1_01700 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_01710 PF14031 Putative serine dehydratase domain NtRootA1_01720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_01720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_01730 PF00155 Aminotransferase class I and II NtRootA1_01740 PF09335 SNARE associated Golgi protein NtRootA1_01750 PF00547 Urease, gamma subunit NtRootA1_01760 PF00699 Urease beta subunit NtRootA1_01770 PF01979 Amidohydrolase family NtRootA1_01770 PF00449 Urease alpha-subunit, N-terminal domain NtRootA1_01780 PF02814 UreE urease accessory protein, N-terminal domain NtRootA1_01780 PF05194 UreE urease accessory protein, C-terminal domain NtRootA1_01790 PF01730 UreF NtRootA1_01800 PF02492 CobW/HypB/UreG, nucleotide-binding domain NtRootA1_01810 PF01774 UreD urease accessory protein NtRootA1_01820 PF03824 High-affinity nickel-transport protein NtRootA1_01850 PF00128 Alpha amylase, catalytic domain NtRootA1_01850 PF03714 Bacterial pullanase-associated domain NtRootA1_01850 PF02806 Alpha amylase, C-terminal all-beta domain NtRootA1_01890 PF00248 Aldo/keto reductase family NtRootA1_01910 PF00248 Aldo/keto reductase family NtRootA1_01920 PF00248 Aldo/keto reductase family NtRootA1_01940 PF07311 Dodecin NtRootA1_01970 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_01970 PF07729 FCD domain NtRootA1_01980 PF08386 TAP-like protein NtRootA1_01980 PF00561 alpha/beta hydrolase fold NtRootA1_02000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA1_02000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA1_02010 PF02447 GntP family permease NtRootA1_02020 PF01116 Fructose-bisphosphate aldolase class-II NtRootA1_02110 PF04183 IucA / IucC family NtRootA1_02110 PF06276 Ferric iron reductase FhuF-like transporter NtRootA1_02130 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NtRootA1_02140 PF00282 Pyridoxal-dependent decarboxylase conserved domain NtRootA1_02190 PF00746 LPXTG cell wall anchor motif NtRootA1_02190 PF16555 Gram-positive pilin subunit D1, N-terminal domain NtRootA1_02240 PF00583 Acetyltransferase (GNAT) family NtRootA1_02270 PF00155 Aminotransferase class I and II NtRootA1_02270 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_02280 PF00083 Sugar (and other) transporter NtRootA1_02290 PF05175 Methyltransferase small domain NtRootA1_02290 PF17827 PrmC N-terminal domain NtRootA1_02320 PF04679 ATP dependent DNA ligase C terminal region NtRootA1_02320 PF01068 ATP dependent DNA ligase domain NtRootA1_02320 PF13298 DNA polymerase Ligase (LigD) NtRootA1_02330 PF02735 Ku70/Ku80 beta-barrel domain NtRootA1_02340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_02350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_02380 PF07702 UTRA domain NtRootA1_02380 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_02430 PF00210 Ferritin-like domain NtRootA1_02480 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootA1_02480 PF00391 PEP-utilising enzyme, mobile domain NtRootA1_02480 PF05524 PEP-utilising enzyme, N-terminal NtRootA1_02490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NtRootA1_02490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NtRootA1_02500 PF00294 pfkB family carbohydrate kinase NtRootA1_02510 PF00455 DeoR C terminal sensor domain NtRootA1_02510 PF08220 DeoR-like helix-turn-helix domain NtRootA1_02570 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootA1_02610 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_02620 PF13419 Haloacid dehalogenase-like hydrolase NtRootA1_02630 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootA1_02630 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootA1_02630 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootA1_02670 PF01047 MarR family NtRootA1_02680 PF01040 UbiA prenyltransferase family NtRootA1_02700 PF01593 Flavin containing amine oxidoreductase NtRootA1_02720 PF00348 Polyprenyl synthetase NtRootA1_02730 PF00293 NUDIX domain NtRootA1_02750 PF01566 Natural resistance-associated macrophage protein NtRootA1_02750 PF03358 NADPH-dependent FMN reductase NtRootA1_02770 PF03466 LysR substrate binding domain NtRootA1_02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_02830 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_02830 PF07729 FCD domain NtRootA1_02860 PF00920 Dehydratase family NtRootA1_02870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_02870 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_02870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_02920 PF07729 FCD domain NtRootA1_02920 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_02930 PF00171 Aldehyde dehydrogenase family NtRootA1_02940 PF00202 Aminotransferase class-III NtRootA1_02960 PF00005 ABC transporter NtRootA1_02970 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_02980 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_03000 PF01266 FAD dependent oxidoreductase NtRootA1_03010 PF00171 Aldehyde dehydrogenase family NtRootA1_03020 PF00180 Isocitrate/isopropylmalate dehydrogenase NtRootA1_03030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_03040 PF00171 Aldehyde dehydrogenase family NtRootA1_03050 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_03050 PF00107 Zinc-binding dehydrogenase NtRootA1_03060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_03070 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_03080 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_03080 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA1_03090 PF00005 ABC transporter NtRootA1_03090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_03100 PF03466 LysR substrate binding domain NtRootA1_03110 PF00892 EamA-like transporter family NtRootA1_03120 PF01261 Xylose isomerase-like TIM barrel NtRootA1_03130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_03130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_03150 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_03180 PF03746 LamB/YcsF family NtRootA1_03190 PF02626 Carboxyltransferase domain, subdomain A and B NtRootA1_03200 PF04286 Protein of unknown function (DUF445) NtRootA1_03210 PF03009 Glycerophosphoryl diester phosphodiesterase family NtRootA1_03260 PF01910 Thiamine-binding protein NtRootA1_03270 PF01596 O-methyltransferase NtRootA1_03280 PF00583 Acetyltransferase (GNAT) family NtRootA1_03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_03300 PF03466 LysR substrate binding domain NtRootA1_03310 PF00083 Sugar (and other) transporter NtRootA1_03330 PF00324 Amino acid permease NtRootA1_03340 PF13732 Domain of unknown function (DUF4162) NtRootA1_03340 PF00005 ABC transporter NtRootA1_03370 PF01638 HxlR-like helix-turn-helix NtRootA1_03410 PF17391 Urocanase N-terminal domain NtRootA1_03410 PF17392 Urocanase C-terminal domain NtRootA1_03410 PF01175 Urocanase Rossmann-like domain NtRootA1_03420 PF00221 Aromatic amino acid lyase NtRootA1_03450 PF05088 Bacterial NAD-glutamate dehydrogenase NtRootA1_03470 PF00491 Arginase family NtRootA1_03480 PF00860 Permease family NtRootA1_03530 PF00582 Universal stress protein family NtRootA1_03540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootA1_03540 PF00391 PEP-utilising enzyme, mobile domain NtRootA1_03550 PF01545 Cation efflux family NtRootA1_03550 PF16916 Dimerisation domain of Zinc Transporter NtRootA1_03570 PF00294 pfkB family carbohydrate kinase NtRootA1_03600 PF13443 Cro/C1-type HTH DNA-binding domain NtRootA1_03640 PF00005 ABC transporter NtRootA1_03640 PF13732 Domain of unknown function (DUF4162) NtRootA1_03650 PF13416 Bacterial extracellular solute-binding protein NtRootA1_03660 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_03670 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_03680 PF02308 MgtC family NtRootA1_03730 PF03780 Asp23 family, cell envelope-related function NtRootA1_03810 PF01547 Bacterial extracellular solute-binding protein NtRootA1_03820 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_03830 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_03840 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_03880 PF00072 Response regulator receiver domain NtRootA1_03880 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_03890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_03890 PF07730 Histidine kinase NtRootA1_03920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootA1_03920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootA1_03930 PF01144 Coenzyme A transferase NtRootA1_03940 PF01144 Coenzyme A transferase NtRootA1_03970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA1_03970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA1_03970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA1_03970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA1_04000 PF00171 Aldehyde dehydrogenase family NtRootA1_04010 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_04020 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_04040 PF01791 DeoC/LacD family aldolase NtRootA1_04060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_04060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_04070 PF00455 DeoR C terminal sensor domain NtRootA1_04070 PF08220 DeoR-like helix-turn-helix domain NtRootA1_04110 PF00578 AhpC/TSA family NtRootA1_04110 PF17991 Thioredoxin like C-terminal domain NtRootA1_04110 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootA1_04120 PF02469 Fasciclin domain NtRootA1_04140 PF02028 BCCT, betaine/carnitine/choline family transporter NtRootA1_04150 PF01614 Bacterial transcriptional regulator NtRootA1_04150 PF09339 IclR helix-turn-helix domain NtRootA1_04160 PF02634 FdhD/NarQ family NtRootA1_04170 PF03454 MoeA C-terminal region (domain IV) NtRootA1_04170 PF03453 MoeA N-terminal region (domain I and II) NtRootA1_04170 PF00994 Probable molybdopterin binding domain NtRootA1_04180 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_04180 PF00107 Zinc-binding dehydrogenase NtRootA1_04190 PF03928 Haem-degrading NtRootA1_04200 PF01568 Molydopterin dinucleotide binding domain NtRootA1_04200 PF00384 Molybdopterin oxidoreductase NtRootA1_04210 PF02219 Methylenetetrahydrofolate reductase NtRootA1_04220 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootA1_04220 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootA1_04230 PF04961 Formiminotransferase-cyclodeaminase NtRootA1_04240 PF16350 FAD dependent oxidoreductase central domain NtRootA1_04240 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA1_04240 PF01571 Aminomethyltransferase folate-binding domain NtRootA1_04240 PF01266 FAD dependent oxidoreductase NtRootA1_04250 PF00551 Formyl transferase NtRootA1_04260 PF07729 FCD domain NtRootA1_04260 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_04270 PF01680 SOR/SNZ family NtRootA1_04290 PF00107 Zinc-binding dehydrogenase NtRootA1_04290 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_04300 PF00753 Metallo-beta-lactamase superfamily NtRootA1_04310 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_04310 PF00072 Response regulator receiver domain NtRootA1_04320 PF01380 SIS domain NtRootA1_04330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NtRootA1_04360 PF00875 DNA photolyase NtRootA1_04360 PF03441 FAD binding domain of DNA photolyase NtRootA1_04370 PF00999 Sodium/hydrogen exchanger family NtRootA1_04390 PF07690 Major Facilitator Superfamily NtRootA1_04410 PF00171 Aldehyde dehydrogenase family NtRootA1_04420 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_04430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA1_04430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA1_04440 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_04460 PF00005 ABC transporter NtRootA1_04520 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_04520 PF00501 AMP-binding enzyme NtRootA1_04530 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_04530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_04530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_04550 PF00732 GMC oxidoreductase NtRootA1_04550 PF05199 GMC oxidoreductase NtRootA1_04560 PF00171 Aldehyde dehydrogenase family NtRootA1_04600 PF00581 Rhodanese-like domain NtRootA1_04620 PF09278 MerR, DNA binding NtRootA1_04620 PF00376 MerR family regulatory protein NtRootA1_04630 PF03551 Transcriptional regulator PadR-like family NtRootA1_04650 PF00171 Aldehyde dehydrogenase family NtRootA1_04660 PF07722 Peptidase C26 NtRootA1_04670 PF00120 Glutamine synthetase, catalytic domain NtRootA1_04680 PF13520 Amino acid permease NtRootA1_04690 PF07729 FCD domain NtRootA1_04690 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_04700 PF02540 NAD synthase NtRootA1_04710 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_04740 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_04760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_04760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_04780 PF02614 Glucuronate isomerase NtRootA1_04790 PF08125 Mannitol dehydrogenase C-terminal domain NtRootA1_04790 PF01232 Mannitol dehydrogenase Rossmann domain NtRootA1_04800 PF13378 Enolase C-terminal domain-like NtRootA1_04800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA1_04820 PF13407 Periplasmic binding protein domain NtRootA1_04830 PF00005 ABC transporter NtRootA1_04840 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_04850 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_04860 PF00156 Phosphoribosyl transferase domain NtRootA1_04890 PF13344 Haloacid dehalogenase-like hydrolase NtRootA1_04910 PF02527 rRNA small subunit methyltransferase G NtRootA1_04910 PF00588 SpoU rRNA Methylase family NtRootA1_04930 PF01116 Fructose-bisphosphate aldolase class-II NtRootA1_05010 PF00709 Adenylosuccinate synthetase NtRootA1_05020 PF07690 Major Facilitator Superfamily NtRootA1_05060 PF14765 Polyketide synthase dehydratase NtRootA1_05060 PF00550 Phosphopantetheine attachment site NtRootA1_05060 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA1_05060 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA1_05060 PF16197 Ketoacyl-synthetase C-terminal extension NtRootA1_05060 PF08659 KR domain NtRootA1_05060 PF00698 Acyl transferase domain NtRootA1_05060 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_05070 PF00005 ABC transporter NtRootA1_05070 PF16326 ABC transporter C-terminal domain NtRootA1_05070 PF12848 ABC transporter NtRootA1_05080 PF07690 Major Facilitator Superfamily NtRootA1_05090 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_05090 PF17926 Tetracyclin repressor-like, C-terminal domain NtRootA1_05100 PF01047 MarR family NtRootA1_05110 PF07690 Major Facilitator Superfamily NtRootA1_05120 PF07729 FCD domain NtRootA1_05120 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_05140 PF01266 FAD dependent oxidoreductase NtRootA1_05150 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_05160 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_05170 PF00005 ABC transporter NtRootA1_05230 PF00171 Aldehyde dehydrogenase family NtRootA1_05240 PF07690 Major Facilitator Superfamily NtRootA1_05240 PF00083 Sugar (and other) transporter NtRootA1_05250 PF00294 pfkB family carbohydrate kinase NtRootA1_05260 PF00005 ABC transporter NtRootA1_05270 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_05280 PF13407 Periplasmic binding protein domain NtRootA1_05290 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_05320 PF00072 Response regulator receiver domain NtRootA1_05320 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_05370 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_05380 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_05390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_05400 PF00005 ABC transporter NtRootA1_05410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_05410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_05420 PF01266 FAD dependent oxidoreductase NtRootA1_05450 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA1_05450 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA1_05470 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_05480 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_05490 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_05520 PF13380 CoA binding domain NtRootA1_05550 PF04237 YjbR NtRootA1_05570 PF01547 Bacterial extracellular solute-binding protein NtRootA1_05580 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_05590 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_05660 PF01613 Flavin reductase like domain NtRootA1_05680 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NtRootA1_05680 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NtRootA1_05710 PF00083 Sugar (and other) transporter NtRootA1_05720 PF07729 FCD domain NtRootA1_05720 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_05750 PF05230 MASE2 domain NtRootA1_05750 PF00990 Diguanylate cyclase, GGDEF domain NtRootA1_05770 PF00563 EAL domain NtRootA1_05770 PF00990 Diguanylate cyclase, GGDEF domain NtRootA1_05770 PF03707 Bacterial signalling protein N terminal repeat NtRootA1_05790 PF00586 AIR synthase related protein, N-terminal domain NtRootA1_05790 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NtRootA1_05790 PF02769 AIR synthase related protein, C-terminal domain NtRootA1_05840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_05840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_05850 PF00754 F5/8 type C domain NtRootA1_05850 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase NtRootA1_05850 PF13088 BNR repeat-like domain NtRootA1_05860 PF00082 Subtilase family NtRootA1_05860 PF06280 Fn3-like domain NtRootA1_05860 PF02225 PA domain NtRootA1_05860 PF00746 LPXTG cell wall anchor motif NtRootA1_05910 PF00557 Metallopeptidase family M24 NtRootA1_05920 PF01047 MarR family NtRootA1_05980 PF07691 PA14 domain NtRootA1_05980 PF14310 Fibronectin type III-like domain NtRootA1_05980 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA1_05980 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_06010 PF00106 short chain dehydrogenase NtRootA1_06040 PF01494 FAD binding domain NtRootA1_06050 PF01842 ACT domain NtRootA1_06050 PF00696 Amino acid kinase family NtRootA1_06050 PF13840 ACT domain NtRootA1_06070 PF13662 Toprim domain NtRootA1_06070 PF02132 RecR protein NtRootA1_06080 PF12169 DNA polymerase III subunits gamma and tau domain III NtRootA1_06090 PF02557 D-alanyl-D-alanine carboxypeptidase NtRootA1_06100 PF01784 NIF3 (NGG1p interacting factor 3) NtRootA1_06130 PF00171 Aldehyde dehydrogenase family NtRootA1_06150 PF07690 Major Facilitator Superfamily NtRootA1_06160 PF01047 MarR family NtRootA1_06170 PF01551 Peptidase family M23 NtRootA1_06170 PF10145 Phage-related minor tail protein NtRootA1_06170 PF01464 Transglycosylase SLT domain NtRootA1_06180 PF00255 Glutathione peroxidase NtRootA1_06190 PF00149 Calcineurin-like phosphoesterase NtRootA1_06200 PF17101 Stealth protein CR1, conserved region 1 NtRootA1_06200 PF11380 Stealth protein CR2, conserved region 2 NtRootA1_06200 PF17102 Stealth protein CR3, conserved region 3 NtRootA1_06200 PF17103 Stealth protein CR4, conserved region 4 NtRootA1_06240 PF13977 BetI-type transcriptional repressor, C-terminal NtRootA1_06240 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_06250 PF00083 Sugar (and other) transporter NtRootA1_06260 PF00293 NUDIX domain NtRootA1_06270 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_06320 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_06340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_06350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_06360 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NtRootA1_06380 PF13439 Glycosyltransferase Family 4 NtRootA1_06410 PF00582 Universal stress protein family NtRootA1_06420 PF01970 Tripartite tricarboxylate transporter TctA family NtRootA1_06450 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NtRootA1_06450 PF17203 Single cache domain 3 NtRootA1_06450 PF00989 PAS fold NtRootA1_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_06460 PF00072 Response regulator receiver domain NtRootA1_06480 PF03928 Haem-degrading NtRootA1_06490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_06490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_06500 PF07676 WD40-like Beta Propeller Repeat NtRootA1_06520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_06520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_06530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_06530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_06550 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_06560 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_06570 PF01547 Bacterial extracellular solute-binding protein NtRootA1_06580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_06580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_06600 PF00480 ROK family NtRootA1_06610 PF07690 Major Facilitator Superfamily NtRootA1_06620 PF01274 Malate synthase NtRootA1_06630 PF00463 Isocitrate lyase family NtRootA1_06640 PF01381 Helix-turn-helix NtRootA1_06660 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_06680 PF08543 Phosphomethylpyrimidine kinase NtRootA1_06700 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_06700 PF00672 HAMP domain NtRootA1_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_06710 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_06710 PF00072 Response regulator receiver domain NtRootA1_06720 PF00083 Sugar (and other) transporter NtRootA1_06750 PF01702 Queuine tRNA-ribosyltransferase NtRootA1_06810 PF08402 TOBE domain NtRootA1_06810 PF00005 ABC transporter NtRootA1_06820 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_06850 PF00106 short chain dehydrogenase NtRootA1_06860 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_06860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_06860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_06950 PF00535 Glycosyl transferase family 2 NtRootA1_06980 PF00311 Phosphoenolpyruvate carboxylase NtRootA1_07000 PF09335 SNARE associated Golgi protein NtRootA1_07010 PF01661 Macro domain NtRootA1_07030 PF00849 RNA pseudouridylate synthase NtRootA1_07080 PF00155 Aminotransferase class I and II NtRootA1_07080 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_07100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootA1_07100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootA1_07110 PF08494 DEAD/H associated NtRootA1_07110 PF00271 Helicase conserved C-terminal domain NtRootA1_07110 PF00270 DEAD/DEAH box helicase NtRootA1_07200 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_07200 PF00107 Zinc-binding dehydrogenase NtRootA1_07220 PF00534 Glycosyl transferases group 1 NtRootA1_07220 PF13439 Glycosyltransferase Family 4 NtRootA1_07240 PF14437 MafB19-like deaminase NtRootA1_07270 PF13419 Haloacid dehalogenase-like hydrolase NtRootA1_07290 PF07739 TipAS antibiotic-recognition domain NtRootA1_07290 PF13411 MerR HTH family regulatory protein NtRootA1_07310 PF00672 HAMP domain NtRootA1_07310 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_07320 PF00072 Response regulator receiver domain NtRootA1_07320 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_07330 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_07330 PF00072 Response regulator receiver domain NtRootA1_07350 PF07729 FCD domain NtRootA1_07350 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_07360 PF01925 Sulfite exporter TauE/SafE NtRootA1_07370 PF01979 Amidohydrolase family NtRootA1_07380 PF07690 Major Facilitator Superfamily NtRootA1_07390 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_07410 PF03466 LysR substrate binding domain NtRootA1_07420 PF00892 EamA-like transporter family NtRootA1_07440 PF08361 MAATS-type transcriptional repressor, C-terminal region NtRootA1_07440 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_07470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootA1_07470 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_07470 PF00403 Heavy-metal-associated domain NtRootA1_07480 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NtRootA1_07490 PF00480 ROK family NtRootA1_07500 PF00701 Dihydrodipicolinate synthetase family NtRootA1_07510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_07510 PF00005 ABC transporter NtRootA1_07520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_07520 PF00005 ABC transporter NtRootA1_07530 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_07540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_07550 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_07550 PF07702 UTRA domain NtRootA1_07560 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NtRootA1_07560 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NtRootA1_07570 PF00042 Globin NtRootA1_07570 PF00175 Oxidoreductase NAD-binding domain NtRootA1_07570 PF00970 Oxidoreductase FAD-binding domain NtRootA1_07580 PF02082 Transcriptional regulator NtRootA1_07600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA1_07600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA1_07600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA1_07600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA1_07610 PF00271 Helicase conserved C-terminal domain NtRootA1_07610 PF00570 HRDC domain NtRootA1_07610 PF16124 RecQ zinc-binding NtRootA1_07610 PF00270 DEAD/DEAH box helicase NtRootA1_07610 PF09382 RQC domain NtRootA1_07620 PF07690 Major Facilitator Superfamily NtRootA1_07630 PF00326 Prolyl oligopeptidase family NtRootA1_07630 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NtRootA1_07660 PF00324 Amino acid permease NtRootA1_07670 PF00149 Calcineurin-like phosphoesterase NtRootA1_07690 PF00550 Phosphopantetheine attachment site NtRootA1_07690 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA1_07690 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA1_07690 PF14765 Polyketide synthase dehydratase NtRootA1_07690 PF16197 Ketoacyl-synthetase C-terminal extension NtRootA1_07690 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_07690 PF08659 KR domain NtRootA1_07690 PF00698 Acyl transferase domain NtRootA1_07710 PF02554 Carbon starvation protein CstA NtRootA1_07710 PF13722 5TM C-terminal transporter carbon starvation CstA NtRootA1_07730 PF10759 Protein of unknown function (DUF2587) NtRootA1_07750 PF00248 Aldo/keto reductase family NtRootA1_07820 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_07850 PF00561 alpha/beta hydrolase fold NtRootA1_07870 PF12169 DNA polymerase III subunits gamma and tau domain III NtRootA1_07880 PF02223 Thymidylate kinase NtRootA1_07890 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootA1_07920 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA1_07930 PF01895 PhoU domain NtRootA1_07940 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_07950 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_07950 PF00072 Response regulator receiver domain NtRootA1_07970 PF02559 CarD-like/TRCF domain NtRootA1_07980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NtRootA1_07990 PF02542 YgbB family NtRootA1_08010 PF01406 tRNA synthetases class I (C) catalytic domain NtRootA1_08010 PF09190 DALR domain NtRootA1_08020 PF08032 RNA 2'-O ribose methyltransferase substrate binding NtRootA1_08020 PF00588 SpoU rRNA Methylase family NtRootA1_08030 PF00795 Carbon-nitrogen hydrolase NtRootA1_08040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootA1_08040 PF00128 Alpha amylase, catalytic domain NtRootA1_08070 PF11897 Protein of unknown function (DUF3417) NtRootA1_08070 PF00343 Carbohydrate phosphorylase NtRootA1_08080 PF11896 Domain of unknown function (DUF3416) NtRootA1_08090 PF00128 Alpha amylase, catalytic domain NtRootA1_08090 PF16657 Maltogenic Amylase, C-terminal domain NtRootA1_08100 PF00128 Alpha amylase, catalytic domain NtRootA1_08100 PF02806 Alpha amylase, C-terminal all-beta domain NtRootA1_08100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootA1_08140 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_08150 PF00128 Alpha amylase, catalytic domain NtRootA1_08170 PF14785 Maltose transport system permease protein MalF P2 domain NtRootA1_08170 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_08180 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_08190 PF00128 Alpha amylase, catalytic domain NtRootA1_08190 PF02903 Alpha amylase, N-terminal ig-like domain NtRootA1_08200 PF01565 FAD binding domain NtRootA1_08200 PF02913 FAD linked oxidases, C-terminal domain NtRootA1_08230 PF07969 Amidohydrolase family NtRootA1_08240 PF00005 ABC transporter NtRootA1_08240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_08250 PF00005 ABC transporter NtRootA1_08250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_08260 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_08270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_08280 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_08280 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA1_08290 PF01979 Amidohydrolase family NtRootA1_08320 PF02838 Glycosyl hydrolase family 20, domain 2 NtRootA1_08320 PF00728 Glycosyl hydrolase family 20, catalytic domain NtRootA1_08330 PF00005 ABC transporter NtRootA1_08330 PF17912 MalK OB fold domain NtRootA1_08340 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootA1_08340 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootA1_08340 PF02358 Trehalose-phosphatase NtRootA1_08340 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootA1_08350 PF00982 Glycosyltransferase family 20 NtRootA1_08380 PF07690 Major Facilitator Superfamily NtRootA1_08390 PF00085 Thioredoxin NtRootA1_08400 PF00999 Sodium/hydrogen exchanger family NtRootA1_08410 PF00570 HRDC domain NtRootA1_08410 PF00270 DEAD/DEAH box helicase NtRootA1_08410 PF00271 Helicase conserved C-terminal domain NtRootA1_08410 PF09382 RQC domain NtRootA1_08410 PF16124 RecQ zinc-binding NtRootA1_08420 PF01256 Carbohydrate kinase NtRootA1_08430 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA1_08440 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_08510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_08510 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_08510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_08520 PF01575 MaoC like domain NtRootA1_08530 PF00083 Sugar (and other) transporter NtRootA1_08540 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_08540 PF00501 AMP-binding enzyme NtRootA1_08560 PF01266 FAD dependent oxidoreductase NtRootA1_08620 PF13520 Amino acid permease NtRootA1_08630 PF04371 Porphyromonas-type peptidyl-arginine deiminase NtRootA1_08640 PF00795 Carbon-nitrogen hydrolase NtRootA1_08660 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_08680 PF07687 Peptidase dimerisation domain NtRootA1_08680 PF01546 Peptidase family M20/M25/M40 NtRootA1_08700 PF07690 Major Facilitator Superfamily NtRootA1_08710 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_08720 PF02347 Glycine cleavage system P-protein NtRootA1_08730 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA1_08730 PF01571 Aminomethyltransferase folate-binding domain NtRootA1_08740 PF01597 Glycine cleavage H-protein NtRootA1_08750 PF03313 Serine dehydratase alpha chain NtRootA1_08750 PF03315 Serine dehydratase beta chain NtRootA1_08760 PF01223 DNA/RNA non-specific endonuclease NtRootA1_08800 PF00005 ABC transporter NtRootA1_08800 PF02687 FtsX-like permease family NtRootA1_08800 PF12704 MacB-like periplasmic core domain NtRootA1_08820 PF02388 FemAB family NtRootA1_08840 PF04954 Siderophore-interacting protein NtRootA1_08840 PF08021 Siderophore-interacting FAD-binding domain NtRootA1_08850 PF03167 Uracil DNA glycosylase superfamily NtRootA1_08880 PF00313 'Cold-shock' DNA-binding domain NtRootA1_08890 PF00118 TCP-1/cpn60 chaperonin family NtRootA1_08900 PF00075 RNase H NtRootA1_08920 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_08920 PF00672 HAMP domain NtRootA1_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_08930 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_08930 PF00072 Response regulator receiver domain NtRootA1_08940 PF01810 LysE type translocator NtRootA1_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_08950 PF03466 LysR substrate binding domain NtRootA1_08970 PF00394 Multicopper oxidase NtRootA1_08970 PF07731 Multicopper oxidase NtRootA1_08970 PF07732 Multicopper oxidase NtRootA1_09020 PF00313 'Cold-shock' DNA-binding domain NtRootA1_09040 PF00266 Aminotransferase class-V NtRootA1_09050 PF02742 Iron dependent repressor, metal binding and dimerisation domain NtRootA1_09050 PF01325 Iron dependent repressor, N-terminal DNA binding domain NtRootA1_09050 PF18357 Diphteria toxin repressor SH3 domain NtRootA1_09060 PF04225 Opacity-associated protein A LysM-like domain NtRootA1_09060 PF01551 Peptidase family M23 NtRootA1_09070 PF01476 LysM domain NtRootA1_09070 PF00877 NlpC/P60 family NtRootA1_09070 PF08239 Bacterial SH3 domain NtRootA1_09100 PF12804 MobA-like NTP transferase domain NtRootA1_09120 PF01568 Molydopterin dinucleotide binding domain NtRootA1_09120 PF00384 Molybdopterin oxidoreductase NtRootA1_09130 PF02634 FdhD/NarQ family NtRootA1_09150 PF00005 ABC transporter NtRootA1_09160 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_09170 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_09200 PF16326 ABC transporter C-terminal domain NtRootA1_09200 PF12848 ABC transporter NtRootA1_09200 PF00005 ABC transporter NtRootA1_09210 PF00664 ABC transporter transmembrane region NtRootA1_09210 PF00005 ABC transporter NtRootA1_09220 PF00293 NUDIX domain NtRootA1_09270 PF00459 Inositol monophosphatase family NtRootA1_09280 PF00580 UvrD/REP helicase N-terminal domain NtRootA1_09280 PF13361 UvrD-like helicase C-terminal domain NtRootA1_09300 PF08442 ATP-grasp domain NtRootA1_09300 PF00549 CoA-ligase NtRootA1_09310 PF00549 CoA-ligase NtRootA1_09310 PF02629 CoA binding domain NtRootA1_09320 PF14552 Tautomerase enzyme NtRootA1_09330 PF00294 pfkB family carbohydrate kinase NtRootA1_09350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_09350 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_09350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_09360 PF00171 Aldehyde dehydrogenase family NtRootA1_09370 PF01261 Xylose isomerase-like TIM barrel NtRootA1_09380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_09380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_09390 PF01261 Xylose isomerase-like TIM barrel NtRootA1_09400 PF04962 KduI/IolB family NtRootA1_09410 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_09410 PF07702 UTRA domain NtRootA1_09430 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_09440 PF00005 ABC transporter NtRootA1_09450 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_09460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_09460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_09480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_09480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_09500 PF02540 NAD synthase NtRootA1_09500 PF00117 Glutamine amidotransferase class-I NtRootA1_09500 PF00958 GMP synthase C terminal domain NtRootA1_09570 PF00474 Sodium:solute symporter family NtRootA1_09580 PF07883 Cupin domain NtRootA1_09580 PF01381 Helix-turn-helix NtRootA1_09610 PF00491 Arginase family NtRootA1_09620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_09620 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_09620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_09640 PF07690 Major Facilitator Superfamily NtRootA1_09650 PF00664 ABC transporter transmembrane region NtRootA1_09650 PF00005 ABC transporter NtRootA1_09660 PF00664 ABC transporter transmembrane region NtRootA1_09660 PF00005 ABC transporter NtRootA1_09680 PF03932 CutC family NtRootA1_09690 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA1_09690 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA1_09700 PF05048 Periplasmic copper-binding protein (NosD) NtRootA1_09700 PF18835 Beta helix repeat of Inulin fructotransferase NtRootA1_09710 PF01547 Bacterial extracellular solute-binding protein NtRootA1_09720 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_09730 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_09740 PF18835 Beta helix repeat of Inulin fructotransferase NtRootA1_09740 PF05048 Periplasmic copper-binding protein (NosD) NtRootA1_09750 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_09760 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA1_09760 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA1_09790 PF02929 Beta galactosidase small chain NtRootA1_09790 PF16353 Domain of unknown function(DUF4981) NtRootA1_09790 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootA1_09790 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootA1_09820 PF07728 AAA domain (dynein-related subfamily) NtRootA1_09820 PF12102 Domain of unknown function (DUF3578) NtRootA1_09850 PF13426 PAS domain NtRootA1_09850 PF00672 HAMP domain NtRootA1_09850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_09850 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_09860 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_09860 PF00072 Response regulator receiver domain NtRootA1_09870 PF00174 Oxidoreductase molybdopterin binding domain NtRootA1_09880 PF00970 Oxidoreductase FAD-binding domain NtRootA1_09880 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA1_09880 PF00175 Oxidoreductase NAD-binding domain NtRootA1_09900 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_09900 PF00107 Zinc-binding dehydrogenase NtRootA1_09910 PF00037 4Fe-4S binding domain NtRootA1_09920 PF00171 Aldehyde dehydrogenase family NtRootA1_09950 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_09960 PF02515 CoA-transferase family III NtRootA1_09970 PF17806 Sarcosine oxidase A3 domain NtRootA1_09970 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA1_09970 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_09970 PF01571 Aminomethyltransferase folate-binding domain NtRootA1_09980 PF00083 Sugar (and other) transporter NtRootA1_09990 PF01381 Helix-turn-helix NtRootA1_09990 PF07883 Cupin domain NtRootA1_10010 PF03852 DNA mismatch endonuclease Vsr NtRootA1_10020 PF00067 Cytochrome P450 NtRootA1_10040 PF00155 Aminotransferase class I and II NtRootA1_10050 PF00202 Aminotransferase class-III NtRootA1_10070 PF04055 Radical SAM superfamily NtRootA1_10070 PF06968 Biotin and Thiamin Synthesis associated domain NtRootA1_10100 PF13823 Alcohol dehydrogenase GroES-associated NtRootA1_10100 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_10100 PF00107 Zinc-binding dehydrogenase NtRootA1_10130 PF13580 SIS domain NtRootA1_10140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootA1_10170 PF02734 DAK2 domain NtRootA1_10170 PF02733 Dak1 domain NtRootA1_10180 PF02502 Ribose/Galactose Isomerase NtRootA1_10190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA1_10190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA1_10240 PF00571 CBS domain NtRootA1_10260 PF09371 Tex-like protein N-terminal domain NtRootA1_10260 PF17674 HHH domain NtRootA1_10260 PF16921 Tex protein YqgF-like domain NtRootA1_10260 PF00575 S1 RNA binding domain NtRootA1_10290 PF00962 Adenosine/AMP deaminase NtRootA1_10300 PF02903 Alpha amylase, N-terminal ig-like domain NtRootA1_10300 PF00395 S-layer homology domain NtRootA1_10300 PF00128 Alpha amylase, catalytic domain NtRootA1_10310 PF00708 Acylphosphatase NtRootA1_10320 PF00294 pfkB family carbohydrate kinase NtRootA1_10330 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_10330 PF07729 FCD domain NtRootA1_10340 PF07690 Major Facilitator Superfamily NtRootA1_10350 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootA1_10370 PF00294 pfkB family carbohydrate kinase NtRootA1_10380 PF08532 Beta-galactosidase trimerisation domain NtRootA1_10380 PF02449 Beta-galactosidase NtRootA1_10380 PF08533 Beta-galactosidase C-terminal domain NtRootA1_10390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_10400 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_10480 PF14310 Fibronectin type III-like domain NtRootA1_10480 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_10480 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA1_10490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_10490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_10520 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_10550 PF07690 Major Facilitator Superfamily NtRootA1_10570 PF02583 Metal-sensitive transcriptional repressor NtRootA1_10590 PF01925 Sulfite exporter TauE/SafE NtRootA1_10610 PF00753 Metallo-beta-lactamase superfamily NtRootA1_10620 PF01022 Bacterial regulatory protein, arsR family NtRootA1_10630 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain NtRootA1_10650 PF13538 UvrD-like helicase C-terminal domain NtRootA1_10660 PF16197 Ketoacyl-synthetase C-terminal extension NtRootA1_10660 PF08659 KR domain NtRootA1_10660 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA1_10660 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA1_10660 PF14765 Polyketide synthase dehydratase NtRootA1_10660 PF00698 Acyl transferase domain NtRootA1_10660 PF00550 Phosphopantetheine attachment site NtRootA1_10660 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_10680 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_10680 PF16295 Tetracyclin repressor-like, C-terminal domain NtRootA1_10770 PF00005 ABC transporter NtRootA1_10790 PF01022 Bacterial regulatory protein, arsR family NtRootA1_10850 PF03852 DNA mismatch endonuclease Vsr NtRootA1_10860 PF00145 C-5 cytosine-specific DNA methylase NtRootA1_10890 PF13676 TIR domain NtRootA1_10960 PF12102 Domain of unknown function (DUF3578) NtRootA1_10960 PF07728 AAA domain (dynein-related subfamily) NtRootA1_11020 PF00561 alpha/beta hydrolase fold NtRootA1_11120 PF00106 short chain dehydrogenase NtRootA1_11140 PF00753 Metallo-beta-lactamase superfamily NtRootA1_11150 PF00313 'Cold-shock' DNA-binding domain NtRootA1_11180 PF13520 Amino acid permease NtRootA1_11200 PF01047 MarR family NtRootA1_11250 PF00011 Hsp20/alpha crystallin family NtRootA1_11260 PF13472 GDSL-like Lipase/Acylhydrolase family NtRootA1_11270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NtRootA1_11270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NtRootA1_11270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NtRootA1_11280 PF00534 Glycosyl transferases group 1 NtRootA1_11280 PF13439 Glycosyltransferase Family 4 NtRootA1_11330 PF13411 MerR HTH family regulatory protein NtRootA1_11340 PF00011 Hsp20/alpha crystallin family NtRootA1_11350 PF00226 DnaJ domain NtRootA1_11350 PF01556 DnaJ C terminal domain NtRootA1_11350 PF00684 DnaJ central domain NtRootA1_11380 PF15975 Flotillin NtRootA1_11380 PF01145 SPFH domain / Band 7 family NtRootA1_11420 PF00551 Formyl transferase NtRootA1_11440 PF00083 Sugar (and other) transporter NtRootA1_11450 PF01380 SIS domain NtRootA1_11470 PF02142 MGS-like domain NtRootA1_11470 PF01808 AICARFT/IMPCHase bienzyme NtRootA1_11490 PF03971 Monomeric isocitrate dehydrogenase NtRootA1_11500 PF01266 FAD dependent oxidoreductase NtRootA1_11520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_11520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_11550 PF00005 ABC transporter NtRootA1_11550 PF02687 FtsX-like permease family NtRootA1_11550 PF12704 MacB-like periplasmic core domain NtRootA1_11560 PF00005 ABC transporter NtRootA1_11560 PF02687 FtsX-like permease family NtRootA1_11560 PF12704 MacB-like periplasmic core domain NtRootA1_11570 PF00005 ABC transporter NtRootA1_11590 PF00544 Pectate lyase NtRootA1_11600 PF13407 Periplasmic binding protein domain NtRootA1_11610 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_11620 PF00005 ABC transporter NtRootA1_11630 PF01047 MarR family NtRootA1_11630 PF00480 ROK family NtRootA1_11640 PF00795 Carbon-nitrogen hydrolase NtRootA1_11660 PF01168 Alanine racemase, N-terminal domain NtRootA1_11660 PF00842 Alanine racemase, C-terminal domain NtRootA1_11670 PF13520 Amino acid permease NtRootA1_11680 PF01593 Flavin containing amine oxidoreductase NtRootA1_11680 PF02027 RolB/RolC glucosidase family NtRootA1_11690 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootA1_11710 PF00551 Formyl transferase NtRootA1_11720 PF00464 Serine hydroxymethyltransferase NtRootA1_11730 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootA1_11730 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootA1_11740 PF05231 MASE1 NtRootA1_11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_11740 PF07730 Histidine kinase NtRootA1_11750 PF00072 Response regulator receiver domain NtRootA1_11750 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_11770 PF00005 ABC transporter NtRootA1_11810 PF03372 Endonuclease/Exonuclease/phosphatase family NtRootA1_11820 PF00579 tRNA synthetases class I (W and Y) NtRootA1_11910 PF13085 2Fe-2S iron-sulfur cluster binding domain NtRootA1_11920 PF00890 FAD binding domain NtRootA1_11920 PF02910 Fumarate reductase flavoprotein C-term NtRootA1_11940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NtRootA1_11950 PF00483 Nucleotidyl transferase NtRootA1_11950 PF01050 Mannose-6-phosphate isomerase NtRootA1_11960 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootA1_11960 PF01546 Peptidase family M20/M25/M40 NtRootA1_11970 PF01047 MarR family NtRootA1_11980 PF02566 OsmC-like protein NtRootA1_11990 PF16884 N-terminal domain of oxidoreductase NtRootA1_11990 PF00107 Zinc-binding dehydrogenase NtRootA1_12000 PF02608 ABC transporter substrate-binding protein PnrA-like NtRootA1_12010 PF00005 ABC transporter NtRootA1_12020 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_12030 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_12040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootA1_12050 PF02885 Glycosyl transferase family, helical bundle domain NtRootA1_12050 PF00591 Glycosyl transferase family, a/b domain NtRootA1_12050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NtRootA1_12070 PF09335 SNARE associated Golgi protein NtRootA1_12080 PF00962 Adenosine/AMP deaminase NtRootA1_12090 PF03819 MazG nucleotide pyrophosphohydrolase domain NtRootA1_12100 PF00113 Enolase, C-terminal TIM barrel domain NtRootA1_12100 PF03952 Enolase, N-terminal domain NtRootA1_12130 PF02541 Ppx/GppA phosphatase family NtRootA1_12140 PF00082 Subtilase family NtRootA1_12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_12190 PF00005 ABC transporter NtRootA1_12200 PF12399 Branched-chain amino acid ATP-binding cassette transporter NtRootA1_12200 PF00005 ABC transporter NtRootA1_12210 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_12210 PF11862 Domain of unknown function (DUF3382) NtRootA1_12220 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_12240 PF02803 Thiolase, C-terminal domain NtRootA1_12240 PF00108 Thiolase, N-terminal domain NtRootA1_12250 PF00288 GHMP kinases N terminal domain NtRootA1_12250 PF10509 Galactokinase galactose-binding signature NtRootA1_12250 PF08544 GHMP kinases C terminal NtRootA1_12260 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NtRootA1_12260 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NtRootA1_12270 PF01263 Aldose 1-epimerase NtRootA1_12280 PF01594 AI-2E family transporter NtRootA1_12290 PF13291 ACT domain NtRootA1_12290 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA1_12300 PF01694 Rhomboid family NtRootA1_12310 PF01272 Transcription elongation factor, GreA/GreB, C-term NtRootA1_12310 PF03449 Transcription elongation factor, N-terminal NtRootA1_12330 PF02585 GlcNAc-PI de-N-acetylase NtRootA1_12380 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_12380 PF00107 Zinc-binding dehydrogenase NtRootA1_12390 PF01177 Asp/Glu/Hydantoin racemase NtRootA1_12400 PF07690 Major Facilitator Superfamily NtRootA1_12410 PF05378 Hydantoinase/oxoprolinase N-terminal region NtRootA1_12410 PF01968 Hydantoinase/oxoprolinase NtRootA1_12450 PF01979 Amidohydrolase family NtRootA1_12460 PF03190 Protein of unknown function, DUF255 NtRootA1_12470 PF03006 Haemolysin-III related NtRootA1_12480 PF01255 Putative undecaprenyl diphosphate synthase NtRootA1_12490 PF02562 PhoH-like protein NtRootA1_12490 PF13638 PIN domain NtRootA1_12520 PF01478 Type IV leader peptidase family NtRootA1_12520 PF06750 Bacterial Peptidase A24 N-terminal domain NtRootA1_12550 PF00206 Lyase NtRootA1_12550 PF10415 Fumarase C C-terminus NtRootA1_12560 PF00484 Carbonic anhydrase NtRootA1_12580 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NtRootA1_12600 PF01238 Phosphomannose isomerase type I NtRootA1_12620 PF00731 AIR carboxylase NtRootA1_12630 PF02222 ATP-grasp domain NtRootA1_12630 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NtRootA1_12660 PF02467 Transcription factor WhiB NtRootA1_12670 PF00535 Glycosyl transferase family 2 NtRootA1_12670 PF00534 Glycosyl transferases group 1 NtRootA1_12720 PF05221 S-adenosyl-L-homocysteine hydrolase NtRootA1_12720 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NtRootA1_12730 PF17964 Bacterial Ig domain NtRootA1_12730 PF03734 L,D-transpeptidase catalytic domain NtRootA1_12750 PF00805 Pentapeptide repeats (8 copies) NtRootA1_12790 PF00501 AMP-binding enzyme NtRootA1_12800 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NtRootA1_12800 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase NtRootA1_12810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootA1_12820 PF00171 Aldehyde dehydrogenase family NtRootA1_12850 PF17863 AAA lid domain NtRootA1_12850 PF07726 ATPase family associated with various cellular activities (AAA) NtRootA1_12860 PF01026 TatD related DNase NtRootA1_12870 PF03990 G5-linked-Ubiquitin-like domain NtRootA1_12870 PF07501 G5 domain NtRootA1_12870 PF06737 Transglycosylase-like domain NtRootA1_12880 PF00398 Ribosomal RNA adenine dimethylase NtRootA1_12890 PF08544 GHMP kinases C terminal NtRootA1_12890 PF00288 GHMP kinases N terminal domain NtRootA1_12900 PF12848 ABC transporter NtRootA1_12900 PF16326 ABC transporter C-terminal domain NtRootA1_12900 PF00005 ABC transporter NtRootA1_12920 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootA1_12920 PF12804 MobA-like NTP transferase domain NtRootA1_12930 PF14572 Phosphoribosyl synthetase-associated domain NtRootA1_12930 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NtRootA1_12940 PF01386 Ribosomal L25p family NtRootA1_12940 PF14693 Ribosomal protein TL5, C-terminal domain NtRootA1_12950 PF01195 Peptidyl-tRNA hydrolase NtRootA1_12970 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_12970 PF00072 Response regulator receiver domain NtRootA1_12990 PF00266 Aminotransferase class-V NtRootA1_13000 PF01592 NifU-like N terminal domain NtRootA1_13010 PF06965 Na+/H+ antiporter 1 NtRootA1_13040 PF13460 NAD(P)H-binding NtRootA1_13040 PF11066 Protein of unknown function (DUF2867) NtRootA1_13050 PF02559 CarD-like/TRCF domain NtRootA1_13050 PF00270 DEAD/DEAH box helicase NtRootA1_13050 PF00271 Helicase conserved C-terminal domain NtRootA1_13050 PF03461 TRCF domain NtRootA1_13050 PF17757 UvrB interaction domain NtRootA1_13060 PF04307 LexA-binding, inner membrane-associated putative hydrolase NtRootA1_13080 PF01791 DeoC/LacD family aldolase NtRootA1_13090 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_13090 PF18113 Rubredoxin binding C-terminal domain NtRootA1_13160 PF05199 GMC oxidoreductase NtRootA1_13200 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_13210 PF00083 Sugar (and other) transporter NtRootA1_13230 PF01266 FAD dependent oxidoreductase NtRootA1_13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_13240 PF03466 LysR substrate binding domain NtRootA1_13260 PF17042 Nucleotide-binding C-terminal domain NtRootA1_13260 PF07005 Sugar-binding N-terminal domain NtRootA1_13270 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootA1_13290 PF02602 Uroporphyrinogen-III synthase HemD NtRootA1_13290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootA1_13300 PF04324 BFD-like [2Fe-2S] binding domain NtRootA1_13300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootA1_13300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootA1_13300 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_13300 PF18267 Rubredoxin NAD+ reductase C-terminal domain NtRootA1_13300 PF13806 Rieske-like [2Fe-2S] domain NtRootA1_13320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA1_13320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA1_13320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA1_13320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA1_13330 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA1_13330 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA1_13340 PF02435 Levansucrase/Invertase NtRootA1_13370 PF01048 Phosphorylase superfamily NtRootA1_13380 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_13380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootA1_13400 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_13400 PF14759 Reductase C-terminal NtRootA1_13410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NtRootA1_13410 PF00384 Molybdopterin oxidoreductase NtRootA1_13410 PF01568 Molydopterin dinucleotide binding domain NtRootA1_13420 PF07690 Major Facilitator Superfamily NtRootA1_13430 PF00083 Sugar (and other) transporter NtRootA1_13430 PF07690 Major Facilitator Superfamily NtRootA1_13440 PF02785 Biotin carboxylase C-terminal domain NtRootA1_13440 PF00289 Biotin carboxylase, N-terminal domain NtRootA1_13440 PF00364 Biotin-requiring enzyme NtRootA1_13440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA1_13450 PF02545 Maf-like protein NtRootA1_13460 PF03176 MMPL family NtRootA1_13480 PF01906 Putative heavy-metal-binding NtRootA1_13490 PF00375 Sodium:dicarboxylate symporter family NtRootA1_13510 PF01039 Carboxyl transferase domain NtRootA1_13520 PF00106 short chain dehydrogenase NtRootA1_13530 PF03099 Biotin/lipoate A/B protein ligase family NtRootA1_13530 PF08279 HTH domain NtRootA1_13530 PF02237 Biotin protein ligase C terminal domain NtRootA1_13550 PF16701 Adenylate cyclase regulatory domain NtRootA1_13550 PF00211 Adenylate and Guanylate cyclase catalytic domain NtRootA1_13590 PF17863 AAA lid domain NtRootA1_13590 PF07726 ATPase family associated with various cellular activities (AAA) NtRootA1_13650 PF13191 AAA ATPase domain NtRootA1_13650 PF00069 Protein kinase domain NtRootA1_13670 PF12538 DNA transporter NtRootA1_13670 PF01580 FtsK/SpoIIIE family NtRootA1_13680 PF00533 BRCA1 C Terminus (BRCT) domain NtRootA1_13680 PF01653 NAD-dependent DNA ligase adenylation domain NtRootA1_13680 PF03120 NAD-dependent DNA ligase OB-fold domain NtRootA1_13680 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NtRootA1_13680 PF12826 Helix-hairpin-helix motif NtRootA1_13690 PF00459 Inositol monophosphatase family NtRootA1_13710 PF00296 Luciferase-like monooxygenase NtRootA1_13730 PF01042 Endoribonuclease L-PSP NtRootA1_13740 PF12431 Transcriptional regulator NtRootA1_13740 PF00072 Response regulator receiver domain NtRootA1_13760 PF03600 Citrate transporter NtRootA1_13770 PF02686 Glu-tRNAGln amidotransferase C subunit NtRootA1_13780 PF01425 Amidase NtRootA1_13790 PF02934 GatB/GatE catalytic domain NtRootA1_13790 PF02637 GatB domain NtRootA1_13820 PF03781 Sulfatase-modifying factor enzyme 1 NtRootA1_13830 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_13840 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_13860 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_13870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_13890 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_13890 PF00107 Zinc-binding dehydrogenase NtRootA1_13900 PF00155 Aminotransferase class I and II NtRootA1_13920 PF01979 Amidohydrolase family NtRootA1_13930 PF13493 Domain of unknown function (DUF4118) NtRootA1_13930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_13930 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_13930 PF02702 Osmosensitive K+ channel His kinase sensor domain NtRootA1_13930 PF00582 Universal stress protein family NtRootA1_13940 PF00072 Response regulator receiver domain NtRootA1_13940 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_13970 PF02386 Cation transport protein NtRootA1_13980 PF01380 SIS domain NtRootA1_13990 PF00480 ROK family NtRootA1_14000 PF00294 pfkB family carbohydrate kinase NtRootA1_14010 PF01116 Fructose-bisphosphate aldolase class-II NtRootA1_14020 PF08220 DeoR-like helix-turn-helix domain NtRootA1_14020 PF00455 DeoR C terminal sensor domain NtRootA1_14030 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA1_14070 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootA1_14080 PF00561 alpha/beta hydrolase fold NtRootA1_14150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA1_14150 PF03129 Anticodon binding domain NtRootA1_14170 PF08031 Berberine and berberine like NtRootA1_14170 PF01565 FAD binding domain NtRootA1_14190 PF01207 Dihydrouridine synthase (Dus) NtRootA1_14200 PF13286 Phosphohydrolase-associated domain NtRootA1_14200 PF01966 HD domain NtRootA1_14210 PF10410 DnaB-helicase binding domain of primase NtRootA1_14210 PF08278 DNA primase DnaG DnaB-binding NtRootA1_14210 PF13662 Toprim domain NtRootA1_14210 PF08275 DNA primase catalytic core, N-terminal domain NtRootA1_14210 PF01807 CHC2 zinc finger NtRootA1_14230 PF00756 Putative esterase NtRootA1_14240 PF09924 Uncharacterised conserved protein (DUF2156) NtRootA1_14260 PF07690 Major Facilitator Superfamily NtRootA1_14280 PF01066 CDP-alcohol phosphatidyltransferase NtRootA1_14300 PF00534 Glycosyl transferases group 1 NtRootA1_14320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_14320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_14320 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_14330 PF01551 Peptidase family M23 NtRootA1_14350 PF00318 Ribosomal protein S2 NtRootA1_14360 PF00889 Elongation factor TS NtRootA1_14370 PF00696 Amino acid kinase family NtRootA1_14380 PF01765 Ribosome recycling factor NtRootA1_14420 PF00474 Sodium:solute symporter family NtRootA1_14440 PF00072 Response regulator receiver domain NtRootA1_14440 PF04397 LytTr DNA-binding domain NtRootA1_14450 PF07694 5TMR of 5TMR-LYT NtRootA1_14450 PF06580 Histidine kinase NtRootA1_14470 PF00474 Sodium:solute symporter family NtRootA1_14480 PF14716 Helix-hairpin-helix domain NtRootA1_14480 PF02811 PHP domain NtRootA1_14480 PF14791 DNA polymerase beta thumb NtRootA1_14530 PF01037 Lrp/AsnC ligand binding domain NtRootA1_14540 PF00676 Dehydrogenase E1 component NtRootA1_14550 PF02779 Transketolase, pyrimidine binding domain NtRootA1_14550 PF02780 Transketolase, C-terminal domain NtRootA1_14560 PF02817 e3 binding domain NtRootA1_14560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA1_14560 PF00364 Biotin-requiring enzyme NtRootA1_14570 PF01370 NAD dependent epimerase/dehydratase family NtRootA1_14610 PF01039 Carboxyl transferase domain NtRootA1_14620 PF02785 Biotin carboxylase C-terminal domain NtRootA1_14620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA1_14620 PF00364 Biotin-requiring enzyme NtRootA1_14620 PF00289 Biotin carboxylase, N-terminal domain NtRootA1_14630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_14630 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_14630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_14640 PF01144 Coenzyme A transferase NtRootA1_14650 PF01144 Coenzyme A transferase NtRootA1_14670 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootA1_14680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_14680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_14710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_14710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_14720 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_14730 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_14740 PF01547 Bacterial extracellular solute-binding protein NtRootA1_14750 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_14770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NtRootA1_14770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NtRootA1_14770 PF13288 DXP reductoisomerase C-terminal domain NtRootA1_14780 PF17820 PDZ domain NtRootA1_14780 PF02163 Peptidase family M50 NtRootA1_14800 PF04551 GcpE protein NtRootA1_14820 PF16295 Tetracyclin repressor-like, C-terminal domain NtRootA1_14820 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_14840 PF00005 ABC transporter NtRootA1_14850 PF04073 Aminoacyl-tRNA editing domain NtRootA1_14850 PF03129 Anticodon binding domain NtRootA1_14850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA1_14860 PF01925 Sulfite exporter TauE/SafE NtRootA1_14870 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NtRootA1_14900 PF02576 RimP N-terminal domain NtRootA1_14900 PF17384 RimP C-terminal SH3 domain NtRootA1_14910 PF13184 NusA-like KH domain NtRootA1_14910 PF08529 NusA N-terminal domain NtRootA1_14950 PF00009 Elongation factor Tu GTP binding domain NtRootA1_14950 PF11987 Translation-initiation factor 2 NtRootA1_14950 PF04760 Translation initiation factor IF-2, N-terminal region NtRootA1_14960 PF02033 Ribosome-binding factor A NtRootA1_14970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootA1_14980 PF00155 Aminotransferase class I and II NtRootA1_14990 PF09142 tRNA Pseudouridine synthase II, C terminal NtRootA1_14990 PF16198 tRNA pseudouridylate synthase B C-terminal domain NtRootA1_14990 PF01509 TruB family pseudouridylate synthase (N terminal domain) NtRootA1_15020 PF06574 FAD synthetase NtRootA1_15020 PF01687 Riboflavin kinase NtRootA1_15030 PF00312 Ribosomal protein S15 NtRootA1_15040 PF00013 KH domain NtRootA1_15040 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NtRootA1_15040 PF01138 3' exoribonuclease family, domain 1 NtRootA1_15040 PF00575 S1 RNA binding domain NtRootA1_15050 PF00675 Insulinase (Peptidase family M16) NtRootA1_15050 PF05193 Peptidase M16 inactive domain NtRootA1_15080 PF04055 Radical SAM superfamily NtRootA1_15080 PF06463 Molybdenum Cofactor Synthesis C NtRootA1_15090 PF00072 Response regulator receiver domain NtRootA1_15090 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_15100 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_15100 PF00672 HAMP domain NtRootA1_15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_15120 PF00994 Probable molybdopterin binding domain NtRootA1_15120 PF03453 MoeA N-terminal region (domain I and II) NtRootA1_15120 PF03454 MoeA C-terminal region (domain IV) NtRootA1_15130 PF01967 MoaC family NtRootA1_15140 PF00994 Probable molybdopterin binding domain NtRootA1_15150 PF02391 MoaE protein NtRootA1_15160 PF01113 Dihydrodipicolinate reductase, N-terminus NtRootA1_15160 PF05173 Dihydrodipicolinate reductase, C-terminus NtRootA1_15210 PF00701 Dihydrodipicolinate synthetase family NtRootA1_15220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NtRootA1_15220 PF12706 Beta-lactamase superfamily domain NtRootA1_15220 PF17770 Ribonuclease J C-terminal domain NtRootA1_15230 PF17854 FtsK alpha domain NtRootA1_15230 PF09397 Ftsk gamma domain NtRootA1_15230 PF01580 FtsK/SpoIIIE family NtRootA1_15240 PF01066 CDP-alcohol phosphatidyltransferase NtRootA1_15250 PF02464 Competence-damaged protein NtRootA1_15250 PF18146 Damage-inducible protein CinA KH domain NtRootA1_15250 PF00994 Probable molybdopterin binding domain NtRootA1_15270 PF01047 MarR family NtRootA1_15290 PF00154 recA bacterial DNA recombination protein NtRootA1_15300 PF02631 RecX family NtRootA1_15310 PF04055 Radical SAM superfamily NtRootA1_15310 PF01938 TRAM domain NtRootA1_15310 PF00919 Uncharacterized protein family UPF0004 NtRootA1_15330 PF01678 Diaminopimelate epimerase NtRootA1_15340 PF05175 Methyltransferase small domain NtRootA1_15350 PF16360 GTP-binding GTPase Middle Region NtRootA1_15350 PF13167 GTP-binding GTPase N-terminal NtRootA1_15350 PF01926 50S ribosome-binding GTPase NtRootA1_15360 PF13307 Helicase C-terminal domain NtRootA1_15370 PF01726 LexA DNA binding domain NtRootA1_15370 PF00717 Peptidase S24-like NtRootA1_15380 PF01476 LysM domain NtRootA1_15390 PF00155 Aminotransferase class I and II NtRootA1_15400 PF00475 Imidazoleglycerol-phosphate dehydratase NtRootA1_15410 PF00117 Glutamine amidotransferase class-I NtRootA1_15430 PF00977 Histidine biosynthesis protein NtRootA1_15480 PF00707 Translation initiation factor IF-3, C-terminal domain NtRootA1_15480 PF05198 Translation initiation factor IF-3, N-terminal domain NtRootA1_15490 PF01632 Ribosomal protein L35 NtRootA1_15500 PF00453 Ribosomal protein L20 NtRootA1_15520 PF00588 SpoU rRNA Methylase family NtRootA1_15520 PF08032 RNA 2'-O ribose methyltransferase substrate binding NtRootA1_15530 PF01545 Cation efflux family NtRootA1_15530 PF16916 Dimerisation domain of Zinc Transporter NtRootA1_15540 PF07690 Major Facilitator Superfamily NtRootA1_15550 PF00293 NUDIX domain NtRootA1_15560 PF04055 Radical SAM superfamily NtRootA1_15570 PF01470 Pyroglutamyl peptidase NtRootA1_15610 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NtRootA1_15610 PF01409 tRNA synthetases class II core domain (F) NtRootA1_15620 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NtRootA1_15620 PF03483 B3/4 domain NtRootA1_15620 PF03484 tRNA synthetase B5 domain NtRootA1_15620 PF01588 Putative tRNA binding domain NtRootA1_15620 PF03147 Ferredoxin-fold anticodon binding domain NtRootA1_15630 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_15630 PF00107 Zinc-binding dehydrogenase NtRootA1_15650 PF01118 Semialdehyde dehydrogenase, NAD binding domain NtRootA1_15650 PF02774 Semialdehyde dehydrogenase, dimerisation domain NtRootA1_15660 PF01960 ArgJ family NtRootA1_15670 PF00696 Amino acid kinase family NtRootA1_15680 PF00202 Aminotransferase class-III NtRootA1_15690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NtRootA1_15690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NtRootA1_15700 PF02863 Arginine repressor, C-terminal domain NtRootA1_15700 PF01316 Arginine repressor, DNA binding domain NtRootA1_15710 PF00764 Arginosuccinate synthase NtRootA1_15720 PF14698 Argininosuccinate lyase C-terminal NtRootA1_15720 PF00206 Lyase NtRootA1_15740 PF02805 Metal binding domain of Ada NtRootA1_15740 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootA1_15740 PF12833 Helix-turn-helix domain NtRootA1_15740 PF06029 AlkA N-terminal domain NtRootA1_15750 PF02245 Methylpurine-DNA glycosylase (MPG) NtRootA1_15770 PF00579 tRNA synthetases class I (W and Y) NtRootA1_15800 PF18407 GCN5-related N-acetyltransferase like domain NtRootA1_15800 PF13344 Haloacid dehalogenase-like hydrolase NtRootA1_15820 PF01479 S4 domain NtRootA1_15820 PF01728 FtsJ-like methyltransferase NtRootA1_15830 PF01513 ATP-NAD kinase NtRootA1_15840 PF02463 RecF/RecN/SMC N terminal domain NtRootA1_15850 PF06418 CTP synthase N-terminus NtRootA1_15850 PF00117 Glutamine amidotransferase class-I NtRootA1_15870 PF02899 Phage integrase, N-terminal SAM-like domain NtRootA1_15870 PF00589 Phage integrase family NtRootA1_15900 PF00285 Citrate synthase, C-terminal domain NtRootA1_15920 PF03972 MmgE/PrpD family NtRootA1_15930 PF07729 FCD domain NtRootA1_15930 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_15940 PF13847 Methyltransferase domain NtRootA1_15950 PF00072 Response regulator receiver domain NtRootA1_15950 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_15960 PF04703 FaeA-like protein NtRootA1_15960 PF00072 Response regulator receiver domain NtRootA1_15970 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NtRootA1_15970 PF17203 Single cache domain 3 NtRootA1_15970 PF00989 PAS fold NtRootA1_15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_15980 PF00375 Sodium:dicarboxylate symporter family NtRootA1_15990 PF13614 AAA domain NtRootA1_16000 PF02616 Segregation and condensation protein ScpA NtRootA1_16010 PF04079 Segregation and condensation complex subunit ScpB NtRootA1_16020 PF01479 S4 domain NtRootA1_16020 PF00849 RNA pseudouridylate synthase NtRootA1_16030 PF02153 Prephenate dehydrogenase NtRootA1_16040 PF02224 Cytidylate kinase NtRootA1_16060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NtRootA1_16060 PF01926 50S ribosome-binding GTPase NtRootA1_16080 PF01047 MarR family NtRootA1_16090 PF07690 Major Facilitator Superfamily NtRootA1_16110 PF01597 Glycine cleavage H-protein NtRootA1_16120 PF00498 FHA domain NtRootA1_16130 PF00376 MerR family regulatory protein NtRootA1_16140 PF02577 Bifunctional nuclease NtRootA1_16150 PF13411 MerR HTH family regulatory protein NtRootA1_16160 PF13614 AAA domain NtRootA1_16170 PF02785 Biotin carboxylase C-terminal domain NtRootA1_16170 PF00289 Biotin carboxylase, N-terminal domain NtRootA1_16170 PF00364 Biotin-requiring enzyme NtRootA1_16170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA1_16170 PF00682 HMGL-like NtRootA1_16170 PF02436 Conserved carboxylase domain NtRootA1_16180 PF00501 AMP-binding enzyme NtRootA1_16190 PF00480 ROK family NtRootA1_16210 PF12146 Serine aminopeptidase, S33 NtRootA1_16240 PF01474 Class-II DAHP synthetase family NtRootA1_16250 PF00069 Protein kinase domain NtRootA1_16250 PF03793 PASTA domain NtRootA1_16260 PF05257 CHAP domain NtRootA1_16260 PF01476 LysM domain NtRootA1_16290 PF00348 Polyprenyl synthetase NtRootA1_16320 PF11799 impB/mucB/samB family C-terminal domain NtRootA1_16320 PF00817 impB/mucB/samB family NtRootA1_16340 PF02381 MraZ protein, putative antitoxin-like NtRootA1_16350 PF01795 MraW methylase family NtRootA1_16370 PF00905 Penicillin binding protein transpeptidase domain NtRootA1_16370 PF03717 Penicillin-binding Protein dimerisation domain NtRootA1_16390 PF02875 Mur ligase family, glutamate ligase domain NtRootA1_16390 PF01225 Mur ligase family, catalytic domain NtRootA1_16390 PF08245 Mur ligase middle domain NtRootA1_16400 PF01225 Mur ligase family, catalytic domain NtRootA1_16400 PF08245 Mur ligase middle domain NtRootA1_16400 PF02875 Mur ligase family, glutamate ligase domain NtRootA1_16410 PF00953 Glycosyl transferase family 4 NtRootA1_16420 PF02875 Mur ligase family, glutamate ligase domain NtRootA1_16420 PF08245 Mur ligase middle domain NtRootA1_16430 PF01098 Cell cycle protein NtRootA1_16440 PF03033 Glycosyltransferase family 28 N-terminal domain NtRootA1_16440 PF04101 Glycosyltransferase family 28 C-terminal domain NtRootA1_16450 PF01225 Mur ligase family, catalytic domain NtRootA1_16450 PF02875 Mur ligase family, glutamate ligase domain NtRootA1_16450 PF08245 Mur ligase middle domain NtRootA1_16470 PF12327 FtsZ family, C-terminal domain NtRootA1_16470 PF00091 Tubulin/FtsZ family, GTPase domain NtRootA1_16480 PF02578 Multi-copper polyphenol oxidoreductase laccase NtRootA1_16490 PF01168 Alanine racemase, N-terminal domain NtRootA1_16500 PF04472 Cell division protein SepF NtRootA1_16520 PF05103 DivIVA protein NtRootA1_16530 PF01252 Signal peptidase (SPase) II NtRootA1_16540 PF00849 RNA pseudouridylate synthase NtRootA1_16550 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootA1_16550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootA1_16550 PF14579 Helix-hairpin-helix motif NtRootA1_16550 PF02811 PHP domain NtRootA1_16580 PF00815 Histidinol dehydrogenase NtRootA1_16590 PF03477 ATP cone domain NtRootA1_16610 PF00480 ROK family NtRootA1_16620 PF00557 Metallopeptidase family M24 NtRootA1_16640 PF02548 Ketopantoate hydroxymethyltransferase NtRootA1_16650 PF00120 Glutamine synthetase, catalytic domain NtRootA1_16650 PF03951 Glutamine synthetase, beta-Grasp domain NtRootA1_16660 PF08335 GlnD PII-uridylyltransferase NtRootA1_16660 PF03710 Glutamate-ammonia ligase adenylyltransferase NtRootA1_16700 PF03951 Glutamine synthetase, beta-Grasp domain NtRootA1_16700 PF00120 Glutamine synthetase, catalytic domain NtRootA1_16730 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NtRootA1_16730 PF04055 Radical SAM superfamily NtRootA1_16740 PF03099 Biotin/lipoate A/B protein ligase family NtRootA1_16780 PF01370 NAD dependent epimerase/dehydratase family NtRootA1_16780 PF08338 Domain of unknown function (DUF1731) NtRootA1_16790 PF03572 Peptidase family S41 NtRootA1_16790 PF07676 WD40-like Beta Propeller Repeat NtRootA1_16790 PF14685 Tricorn protease PDZ domain NtRootA1_16790 PF14684 Tricorn protease C1 domain NtRootA1_16800 PF02566 OsmC-like protein NtRootA1_16820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA1_16820 PF02817 e3 binding domain NtRootA1_16820 PF00364 Biotin-requiring enzyme NtRootA1_16830 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_16830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootA1_16840 PF00883 Cytosol aminopeptidase family, catalytic domain NtRootA1_16840 PF02789 Cytosol aminopeptidase family, N-terminal domain NtRootA1_16880 PF04542 Sigma-70 region 2 NtRootA1_16880 PF00140 Sigma-70 factor, region 1.2 NtRootA1_16880 PF04545 Sigma-70, region 4 NtRootA1_16880 PF04539 Sigma-70 region 3 NtRootA1_16900 PF01751 Toprim domain NtRootA1_16900 PF00986 DNA gyrase B subunit, carboxyl terminus NtRootA1_16900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_16900 PF00204 DNA gyrase B NtRootA1_16910 PF07690 Major Facilitator Superfamily NtRootA1_16930 PF01654 Cytochrome bd terminal oxidase subunit I NtRootA1_16940 PF02322 Cytochrome bd terminal oxidase subunit II NtRootA1_16950 PF00005 ABC transporter NtRootA1_16950 PF00664 ABC transporter transmembrane region NtRootA1_16990 PF03989 DNA gyrase C-terminal domain, beta-propeller NtRootA1_16990 PF00521 DNA gyrase/topoisomerase IV, subunit A NtRootA1_17000 PF00583 Acetyltransferase (GNAT) family NtRootA1_17000 PF13380 CoA binding domain NtRootA1_17000 PF13607 Succinyl-CoA ligase like flavodoxin domain NtRootA1_17030 PF00265 Thymidine kinase NtRootA1_17040 PF11268 Protein of unknown function (DUF3071) NtRootA1_17070 PF00692 dUTPase NtRootA1_17110 PF02080 TrkA-C domain NtRootA1_17110 PF02254 TrkA-N domain NtRootA1_17120 PF02080 TrkA-C domain NtRootA1_17120 PF02254 TrkA-N domain NtRootA1_17130 PF13520 Amino acid permease NtRootA1_17140 PF01938 TRAM domain NtRootA1_17140 PF05958 tRNA (Uracil-5-)-methyltransferase NtRootA1_17150 PF00694 Aconitase C-terminal domain NtRootA1_17150 PF00330 Aconitase family (aconitate hydratase) NtRootA1_17160 PF02780 Transketolase, C-terminal domain NtRootA1_17160 PF02779 Transketolase, pyrimidine binding domain NtRootA1_17160 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NtRootA1_17200 PF00248 Aldo/keto reductase family NtRootA1_17210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA1_17210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA1_17210 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_17220 PF00108 Thiolase, N-terminal domain NtRootA1_17220 PF02803 Thiolase, C-terminal domain NtRootA1_17230 PF00570 HRDC domain NtRootA1_17230 PF01612 3'-5' exonuclease NtRootA1_17250 PF01212 Beta-eliminating lyase NtRootA1_17280 PF01641 SelR domain NtRootA1_17310 PF04073 Aminoacyl-tRNA editing domain NtRootA1_17320 PF02657 Fe-S metabolism associated domain NtRootA1_17330 PF00581 Rhodanese-like domain NtRootA1_17350 PF03594 Benzoate membrane transport protein NtRootA1_17370 PF13520 Amino acid permease NtRootA1_17440 PF00550 Phosphopantetheine attachment site NtRootA1_17440 PF00698 Acyl transferase domain NtRootA1_17440 PF08659 KR domain NtRootA1_17440 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_17440 PF14765 Polyketide synthase dehydratase NtRootA1_17450 PF13411 MerR HTH family regulatory protein NtRootA1_17460 PF16347 Domain of unknown function (DUF4976) NtRootA1_17460 PF00884 Sulfatase NtRootA1_17470 PF00083 Sugar (and other) transporter NtRootA1_17480 PF09339 IclR helix-turn-helix domain NtRootA1_17480 PF01614 Bacterial transcriptional regulator NtRootA1_17520 PF00746 LPXTG cell wall anchor motif NtRootA1_17520 PF16555 Gram-positive pilin subunit D1, N-terminal domain NtRootA1_17550 PF01327 Polypeptide deformylase NtRootA1_17560 PF00551 Formyl transferase NtRootA1_17560 PF02911 Formyl transferase, C-terminal domain NtRootA1_17570 PF01189 16S rRNA methyltransferase RsmB/F NtRootA1_17570 PF01029 NusB family NtRootA1_17580 PF00834 Ribulose-phosphate 3 epimerase family NtRootA1_17610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootA1_17610 PF01872 RibD C-terminal domain NtRootA1_17620 PF00677 Lumazine binding domain NtRootA1_17630 PF00925 GTP cyclohydrolase II NtRootA1_17630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NtRootA1_17640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NtRootA1_17640 PF00925 GTP cyclohydrolase II NtRootA1_17650 PF00885 6,7-dimethyl-8-ribityllumazine synthase NtRootA1_17660 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NtRootA1_17670 PF08029 HisG, C-terminal domain NtRootA1_17670 PF01634 ATP phosphoribosyltransferase NtRootA1_17680 PF00977 Histidine biosynthesis protein NtRootA1_17710 PF01502 Phosphoribosyl-AMP cyclohydrolase NtRootA1_17720 PF04715 Anthranilate synthase component I, N terminal region NtRootA1_17720 PF00425 chorismate binding enzyme NtRootA1_17750 PF00218 Indole-3-glycerol phosphate synthase NtRootA1_17760 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA1_17770 PF00290 Tryptophan synthase alpha chain NtRootA1_17780 PF01790 Prolipoprotein diacylglyceryl transferase NtRootA1_17790 PF00310 Glutamine amidotransferases class-II NtRootA1_17790 PF01645 Conserved region in glutamate synthase NtRootA1_17790 PF01493 GXGXG motif NtRootA1_17790 PF04898 Glutamate synthase central domain NtRootA1_17800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_17800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NtRootA1_17810 PF02887 Pyruvate kinase, alpha/beta domain NtRootA1_17810 PF00224 Pyruvate kinase, barrel domain NtRootA1_17820 PF00072 Response regulator receiver domain NtRootA1_17820 PF03861 ANTAR domain NtRootA1_17830 PF14659 Phage integrase, N-terminal SAM-like domain NtRootA1_17830 PF00589 Phage integrase family NtRootA1_18080 PF00436 Single-strand binding protein family NtRootA1_18110 PF17841 BID domain of Bartonella effector protein (Bep) NtRootA1_18110 PF03389 MobA/MobL family NtRootA1_18110 PF01443 Viral (Superfamily 1) RNA helicase NtRootA1_18140 PF00232 Glycosyl hydrolase family 1 NtRootA1_18150 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_18180 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_18190 PF00701 Dihydrodipicolinate synthetase family NtRootA1_18200 PF01566 Natural resistance-associated macrophage protein NtRootA1_18260 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_18270 PF00083 Sugar (and other) transporter NtRootA1_18280 PF00144 Beta-lactamase NtRootA1_18290 PF07859 alpha/beta hydrolase fold NtRootA1_18300 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_18320 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_18320 PF17754 MftR C-terminal domain NtRootA1_18330 PF00106 short chain dehydrogenase NtRootA1_18340 PF00171 Aldehyde dehydrogenase family NtRootA1_18350 PF12697 Alpha/beta hydrolase family NtRootA1_18370 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_18380 PF01613 Flavin reductase like domain NtRootA1_18390 PF07690 Major Facilitator Superfamily NtRootA1_18410 PF07690 Major Facilitator Superfamily NtRootA1_18410 PF00083 Sugar (and other) transporter NtRootA1_18430 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_18430 PF00501 AMP-binding enzyme NtRootA1_18440 PF00106 short chain dehydrogenase NtRootA1_18450 PF00108 Thiolase, N-terminal domain NtRootA1_18450 PF02803 Thiolase, C-terminal domain NtRootA1_18470 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_18470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_18470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_18480 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_18490 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_18490 PF00501 AMP-binding enzyme NtRootA1_18510 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_18520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_18530 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_18540 PF00005 ABC transporter NtRootA1_18540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_18550 PF00005 ABC transporter NtRootA1_18550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_18580 PF00561 alpha/beta hydrolase fold NtRootA1_18590 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_18600 PF00756 Putative esterase NtRootA1_18600 PF01476 LysM domain NtRootA1_18610 PF00756 Putative esterase NtRootA1_18610 PF01476 LysM domain NtRootA1_18640 PF08220 DeoR-like helix-turn-helix domain NtRootA1_18640 PF00455 DeoR C terminal sensor domain NtRootA1_18650 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NtRootA1_18660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_18670 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_18680 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA1_18680 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_18690 PF00005 ABC transporter NtRootA1_18690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_18700 PF00005 ABC transporter NtRootA1_18700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_18710 PF00248 Aldo/keto reductase family NtRootA1_18720 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootA1_18770 PF00665 Integrase core domain NtRootA1_18820 PF00480 ROK family NtRootA1_18820 PF01047 MarR family NtRootA1_18840 PF01546 Peptidase family M20/M25/M40 NtRootA1_18840 PF07687 Peptidase dimerisation domain NtRootA1_18850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_18850 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_18850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_18860 PF04199 Putative cyclase NtRootA1_18890 PF00501 AMP-binding enzyme NtRootA1_18890 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_18910 PF00005 ABC transporter NtRootA1_18910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_18920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_18920 PF00005 ABC transporter NtRootA1_18930 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_18980 PF07905 Purine catabolism regulatory protein-like family NtRootA1_18980 PF13556 PucR C-terminal helix-turn-helix domain NtRootA1_18990 PF01593 Flavin containing amine oxidoreductase NtRootA1_19010 PF00171 Aldehyde dehydrogenase family NtRootA1_19020 PF00171 Aldehyde dehydrogenase family NtRootA1_19040 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootA1_19040 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootA1_19050 PF01266 FAD dependent oxidoreductase NtRootA1_19050 PF16350 FAD dependent oxidoreductase central domain NtRootA1_19050 PF01571 Aminomethyltransferase folate-binding domain NtRootA1_19050 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA1_19060 PF00551 Formyl transferase NtRootA1_19080 PF01593 Flavin containing amine oxidoreductase NtRootA1_19100 PF02018 Carbohydrate binding domain NtRootA1_19100 PF00331 Glycosyl hydrolase family 10 NtRootA1_19120 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_19150 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_19160 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_19170 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA1_19170 PF14310 Fibronectin type III-like domain NtRootA1_19170 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_19180 PF00232 Glycosyl hydrolase family 1 NtRootA1_19190 PF02449 Beta-galactosidase NtRootA1_19190 PF08532 Beta-galactosidase trimerisation domain NtRootA1_19190 PF08533 Beta-galactosidase C-terminal domain NtRootA1_19210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_19210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_19220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_19220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_19240 PF00480 ROK family NtRootA1_19250 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_19250 PF14759 Reductase C-terminal NtRootA1_19270 PF00067 Cytochrome P450 NtRootA1_19290 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_19300 PF03176 MMPL family NtRootA1_19310 PF07730 Histidine kinase NtRootA1_19310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_19320 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_19320 PF00072 Response regulator receiver domain NtRootA1_19330 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_19330 PF14310 Fibronectin type III-like domain NtRootA1_19330 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA1_19340 PF00232 Glycosyl hydrolase family 1 NtRootA1_19350 PF16355 Domain of unknown function (DUF4982) NtRootA1_19350 PF00703 Glycosyl hydrolases family 2 NtRootA1_19350 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootA1_19350 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NtRootA1_19350 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootA1_19360 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_19360 PF14310 Fibronectin type III-like domain NtRootA1_19360 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA1_19400 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain NtRootA1_19400 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain NtRootA1_19400 PF08531 Alpha-L-rhamnosidase N-terminal domain NtRootA1_19400 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain NtRootA1_19420 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NtRootA1_19420 PF04616 Glycosyl hydrolases family 43 NtRootA1_19460 PF00155 Aminotransferase class I and II NtRootA1_19480 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_19490 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_19510 PF00005 ABC transporter NtRootA1_19520 PF00005 ABC transporter NtRootA1_19530 PF00890 FAD binding domain NtRootA1_19540 PF00083 Sugar (and other) transporter NtRootA1_19540 PF08946 Osmosensory transporter coiled coil NtRootA1_19550 PF12706 Beta-lactamase superfamily domain NtRootA1_19560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_19560 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_19560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_19590 PF00155 Aminotransferase class I and II NtRootA1_19600 PF00171 Aldehyde dehydrogenase family NtRootA1_19610 PF02416 mttA/Hcf106 family NtRootA1_19630 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_19640 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_19650 PF00561 alpha/beta hydrolase fold NtRootA1_19660 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_19670 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_19690 PF04616 Glycosyl hydrolases family 43 NtRootA1_19690 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NtRootA1_19700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_19700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_19740 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_19750 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_19770 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_19780 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_19800 PF08532 Beta-galactosidase trimerisation domain NtRootA1_19800 PF08533 Beta-galactosidase C-terminal domain NtRootA1_19800 PF02449 Beta-galactosidase NtRootA1_19810 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_19830 PF00872 Transposase, Mutator family NtRootA1_19850 PF00872 Transposase, Mutator family NtRootA1_19950 PF01593 Flavin containing amine oxidoreductase NtRootA1_19980 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_19980 PF00107 Zinc-binding dehydrogenase NtRootA1_20000 PF02126 Phosphotriesterase family NtRootA1_20010 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_20020 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_20020 PF00501 AMP-binding enzyme NtRootA1_20030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_20030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_20030 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_20040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_20040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_20040 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_20050 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_20070 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_20070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA1_20070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA1_20080 PF01494 FAD binding domain NtRootA1_20100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA1_20130 PF01012 Electron transfer flavoprotein domain NtRootA1_20140 PF00766 Electron transfer flavoprotein FAD-binding domain NtRootA1_20140 PF01012 Electron transfer flavoprotein domain NtRootA1_20160 PF00107 Zinc-binding dehydrogenase NtRootA1_20160 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_20190 PF17932 Tetracyclin repressor-like, C-terminal domain NtRootA1_20190 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_20200 PF08031 Berberine and berberine like NtRootA1_20200 PF01565 FAD binding domain NtRootA1_20240 PF00890 FAD binding domain NtRootA1_20250 PF01494 FAD binding domain NtRootA1_20260 PF06441 Epoxide hydrolase N terminus NtRootA1_20270 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA1_20280 PF14759 Reductase C-terminal NtRootA1_20280 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_20290 PF00258 Flavodoxin NtRootA1_20310 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_20310 PF14759 Reductase C-terminal NtRootA1_20320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA1_20320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA1_20330 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_20340 PF00108 Thiolase, N-terminal domain NtRootA1_20340 PF02803 Thiolase, C-terminal domain NtRootA1_20350 PF05368 NmrA-like family NtRootA1_20360 PF00067 Cytochrome P450 NtRootA1_20390 PF00005 ABC transporter NtRootA1_20400 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_20440 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NtRootA1_20500 PF00884 Sulfatase NtRootA1_20500 PF12411 Choline sulfatase enzyme C terminal NtRootA1_20530 PF02656 Domain of unknown function (DUF202) NtRootA1_20550 PF13378 Enolase C-terminal domain-like NtRootA1_20550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA1_20560 PF08125 Mannitol dehydrogenase C-terminal domain NtRootA1_20560 PF01232 Mannitol dehydrogenase Rossmann domain NtRootA1_20570 PF02614 Glucuronate isomerase NtRootA1_20580 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_20590 PF00884 Sulfatase NtRootA1_20600 PF00005 ABC transporter NtRootA1_20600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_20610 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA1_20610 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_20620 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_20630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_20640 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_20650 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_20680 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_20690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA1_20700 PF03781 Sulfatase-modifying factor enzyme 1 NtRootA1_20710 PF16347 Domain of unknown function (DUF4976) NtRootA1_20710 PF00884 Sulfatase NtRootA1_20720 PF00884 Sulfatase NtRootA1_20730 PF00884 Sulfatase NtRootA1_20740 PF03466 LysR substrate binding domain NtRootA1_20740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_20750 PF00703 Glycosyl hydrolases family 2 NtRootA1_20750 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootA1_20750 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootA1_20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_20760 PF03466 LysR substrate binding domain NtRootA1_20770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_20780 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_20790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_20790 PF00005 ABC transporter NtRootA1_20800 PF00005 ABC transporter NtRootA1_20800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_20810 PF09339 IclR helix-turn-helix domain NtRootA1_20810 PF01614 Bacterial transcriptional regulator NtRootA1_20820 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA1_20820 PF00970 Oxidoreductase FAD-binding domain NtRootA1_20830 PF00067 Cytochrome P450 NtRootA1_20850 PF00202 Aminotransferase class-III NtRootA1_20860 PF01042 Endoribonuclease L-PSP NtRootA1_20870 PF00202 Aminotransferase class-III NtRootA1_20880 PF07690 Major Facilitator Superfamily NtRootA1_20880 PF00083 Sugar (and other) transporter NtRootA1_20890 PF02538 Hydantoinase B/oxoprolinase NtRootA1_20900 PF01968 Hydantoinase/oxoprolinase NtRootA1_20900 PF05378 Hydantoinase/oxoprolinase N-terminal region NtRootA1_20920 PF07690 Major Facilitator Superfamily NtRootA1_20950 PF02954 Bacterial regulatory protein, Fis family NtRootA1_20950 PF00072 Response regulator receiver domain NtRootA1_20950 PF00158 Sigma-54 interaction domain NtRootA1_20960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_20960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_20960 PF01842 ACT domain NtRootA1_20970 PF00202 Aminotransferase class-III NtRootA1_20980 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_20990 PF01968 Hydantoinase/oxoprolinase NtRootA1_20990 PF05378 Hydantoinase/oxoprolinase N-terminal region NtRootA1_21010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_21010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_21020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_21020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_21020 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_21030 PF00171 Aldehyde dehydrogenase family NtRootA1_21040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_21040 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootA1_21060 PF00920 Dehydratase family NtRootA1_21070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_21070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_21090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_21090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_21100 PF00005 ABC transporter NtRootA1_21110 PF02653 Branched-chain amino acid transport system / permease component NtRootA1_21120 PF13407 Periplasmic binding protein domain NtRootA1_21130 PF02913 FAD linked oxidases, C-terminal domain NtRootA1_21130 PF01565 FAD binding domain NtRootA1_21130 PF13183 4Fe-4S dicluster domain NtRootA1_21240 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_21240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NtRootA1_21250 PF00324 Amino acid permease NtRootA1_21260 PF00795 Carbon-nitrogen hydrolase NtRootA1_21260 PF02540 NAD synthase NtRootA1_21270 PF01593 Flavin containing amine oxidoreductase NtRootA1_21280 PF07905 Purine catabolism regulatory protein-like family NtRootA1_21280 PF17853 GGDEF-like domain NtRootA1_21280 PF13556 PucR C-terminal helix-turn-helix domain NtRootA1_21290 PF07690 Major Facilitator Superfamily NtRootA1_21300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_21300 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_21300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_21310 PF00171 Aldehyde dehydrogenase family NtRootA1_21320 PF07969 Amidohydrolase family NtRootA1_21330 PF01546 Peptidase family M20/M25/M40 NtRootA1_21360 PF07690 Major Facilitator Superfamily NtRootA1_21380 PF00561 alpha/beta hydrolase fold NtRootA1_21440 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_21450 PF01261 Xylose isomerase-like TIM barrel NtRootA1_21460 PF00083 Sugar (and other) transporter NtRootA1_21480 PF02449 Beta-galactosidase NtRootA1_21480 PF08533 Beta-galactosidase C-terminal domain NtRootA1_21480 PF08532 Beta-galactosidase trimerisation domain NtRootA1_21490 PF00248 Aldo/keto reductase family NtRootA1_21510 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_21510 PF00501 AMP-binding enzyme NtRootA1_21520 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_21520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_21520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_21530 PF02803 Thiolase, C-terminal domain NtRootA1_21530 PF00108 Thiolase, N-terminal domain NtRootA1_21540 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_21540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA1_21540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA1_21570 PF00753 Metallo-beta-lactamase superfamily NtRootA1_21580 PF00561 alpha/beta hydrolase fold NtRootA1_21580 PF08386 TAP-like protein NtRootA1_21600 PF01738 Dienelactone hydrolase family NtRootA1_21630 PF01613 Flavin reductase like domain NtRootA1_21670 PF00107 Zinc-binding dehydrogenase NtRootA1_21670 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_21700 PF00083 Sugar (and other) transporter NtRootA1_21700 PF08946 Osmosensory transporter coiled coil NtRootA1_21710 PF02224 Cytidylate kinase NtRootA1_21720 PF01081 KDPG and KHG aldolase NtRootA1_21740 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_21840 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_21850 PF14785 Maltose transport system permease protein MalF P2 domain NtRootA1_21850 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_21870 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_21880 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_21890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_21900 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_21910 PF00005 ABC transporter NtRootA1_21910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_21920 PF00005 ABC transporter NtRootA1_21920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_21930 PF08531 Alpha-L-rhamnosidase N-terminal domain NtRootA1_21930 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain NtRootA1_21930 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain NtRootA1_21930 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain NtRootA1_21940 PF04616 Glycosyl hydrolases family 43 NtRootA1_21940 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NtRootA1_21970 PF07690 Major Facilitator Superfamily NtRootA1_22030 PF14310 Fibronectin type III-like domain NtRootA1_22030 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_22030 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA1_22060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NtRootA1_22060 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term NtRootA1_22070 PF01261 Xylose isomerase-like TIM barrel NtRootA1_22080 PF00121 Triosephosphate isomerase NtRootA1_22090 PF02502 Ribose/Galactose Isomerase NtRootA1_22100 PF02734 DAK2 domain NtRootA1_22100 PF02733 Dak1 domain NtRootA1_22110 PF07690 Major Facilitator Superfamily NtRootA1_22120 PF07729 FCD domain NtRootA1_22120 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_22150 PF00141 Peroxidase NtRootA1_22170 PF01717 Cobalamin-independent synthase, Catalytic domain NtRootA1_22170 PF08267 Cobalamin-independent synthase, N-terminal domain NtRootA1_22190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_22190 PF03466 LysR substrate binding domain NtRootA1_22220 PF01425 Amidase NtRootA1_22250 PF07687 Peptidase dimerisation domain NtRootA1_22250 PF01546 Peptidase family M20/M25/M40 NtRootA1_22260 PF02515 CoA-transferase family III NtRootA1_22270 PF01039 Carboxyl transferase domain NtRootA1_22300 PF01370 NAD dependent epimerase/dehydratase family NtRootA1_22330 PF01740 STAS domain NtRootA1_22330 PF00916 Sulfate permease family NtRootA1_22350 PF00582 Universal stress protein family NtRootA1_22400 PF00005 ABC transporter NtRootA1_22430 PF00689 Cation transporting ATPase, C-terminus NtRootA1_22430 PF00690 Cation transporter/ATPase, N-terminus NtRootA1_22440 PF01522 Polysaccharide deacetylase NtRootA1_22470 PF13732 Domain of unknown function (DUF4162) NtRootA1_22470 PF00005 ABC transporter NtRootA1_22480 PF00582 Universal stress protein family NtRootA1_22510 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootA1_22510 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootA1_22510 PF00391 PEP-utilising enzyme, mobile domain NtRootA1_22520 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootA1_22520 PF02358 Trehalose-phosphatase NtRootA1_22520 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootA1_22520 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootA1_22530 PF00365 Phosphofructokinase NtRootA1_22540 PF00011 Hsp20/alpha crystallin family NtRootA1_22550 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_22570 PF13492 GAF domain NtRootA1_22570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_22570 PF13185 GAF domain NtRootA1_22570 PF07730 Histidine kinase NtRootA1_22580 PF00582 Universal stress protein family NtRootA1_22610 PF00582 Universal stress protein family NtRootA1_22620 PF00582 Universal stress protein family NtRootA1_22630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NtRootA1_22630 PF10996 Beta-Casp domain NtRootA1_22630 PF00753 Metallo-beta-lactamase superfamily NtRootA1_22650 PF00072 Response regulator receiver domain NtRootA1_22650 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_22660 PF13185 GAF domain NtRootA1_22660 PF13492 GAF domain NtRootA1_22660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_22660 PF07730 Histidine kinase NtRootA1_22690 PF00107 Zinc-binding dehydrogenase NtRootA1_22690 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_22700 PF00403 Heavy-metal-associated domain NtRootA1_22720 PF01515 Phosphate acetyl/butaryl transferase NtRootA1_22720 PF07085 DRTGG domain NtRootA1_22740 PF00690 Cation transporter/ATPase, N-terminus NtRootA1_22740 PF00689 Cation transporting ATPase, C-terminus NtRootA1_22760 PF00582 Universal stress protein family NtRootA1_22770 PF00871 Acetokinase family NtRootA1_22780 PF09364 XFP N-terminal domain NtRootA1_22780 PF09363 XFP C-terminal domain NtRootA1_22780 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NtRootA1_22790 PF07731 Multicopper oxidase NtRootA1_22790 PF07732 Multicopper oxidase NtRootA1_22840 PF02311 AraC-like ligand binding domain NtRootA1_22840 PF12833 Helix-turn-helix domain NtRootA1_22850 PF00795 Carbon-nitrogen hydrolase NtRootA1_22900 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA1_22900 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA1_22920 PF06736 Protein of unknown function (DUF1211) NtRootA1_22930 PF04679 ATP dependent DNA ligase C terminal region NtRootA1_22930 PF01068 ATP dependent DNA ligase domain NtRootA1_22930 PF04675 DNA ligase N terminus NtRootA1_22950 PF07690 Major Facilitator Superfamily NtRootA1_22950 PF00083 Sugar (and other) transporter NtRootA1_22960 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NtRootA1_22970 PF03450 CO dehydrogenase flavoprotein C-terminal domain NtRootA1_22970 PF00941 FAD binding domain in molybdopterin dehydrogenase NtRootA1_22980 PF01799 [2Fe-2S] binding domain NtRootA1_22980 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA1_22990 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootA1_22990 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootA1_23010 PF07690 Major Facilitator Superfamily NtRootA1_23020 PF00171 Aldehyde dehydrogenase family NtRootA1_23030 PF01042 Endoribonuclease L-PSP NtRootA1_23040 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA1_23040 PF00175 Oxidoreductase NAD-binding domain NtRootA1_23060 PF00561 alpha/beta hydrolase fold NtRootA1_23080 PF00106 short chain dehydrogenase NtRootA1_23090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_23090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_23090 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_23120 PF00355 Rieske [2Fe-2S] domain NtRootA1_23130 PF01958 Domain of unknown function DUF108 NtRootA1_23130 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootA1_23140 PF01047 MarR family NtRootA1_23200 PF00743 Flavin-binding monooxygenase-like NtRootA1_23210 PF00561 alpha/beta hydrolase fold NtRootA1_23220 PF01593 Flavin containing amine oxidoreductase NtRootA1_23240 PF01494 FAD binding domain NtRootA1_23250 PF00171 Aldehyde dehydrogenase family NtRootA1_23260 PF00107 Zinc-binding dehydrogenase NtRootA1_23260 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_23270 PF00324 Amino acid permease NtRootA1_23280 PF01113 Dihydrodipicolinate reductase, N-terminus NtRootA1_23290 PF02436 Conserved carboxylase domain NtRootA1_23290 PF00364 Biotin-requiring enzyme NtRootA1_23290 PF00682 HMGL-like NtRootA1_23300 PF00364 Biotin-requiring enzyme NtRootA1_23310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA1_23310 PF02785 Biotin carboxylase C-terminal domain NtRootA1_23310 PF00289 Biotin carboxylase, N-terminal domain NtRootA1_23320 PF00202 Aminotransferase class-III NtRootA1_23340 PF02803 Thiolase, C-terminal domain NtRootA1_23340 PF00108 Thiolase, N-terminal domain NtRootA1_23350 PF00501 AMP-binding enzyme NtRootA1_23350 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_23410 PF00474 Sodium:solute symporter family NtRootA1_23430 PF03781 Sulfatase-modifying factor enzyme 1 NtRootA1_23450 PF00884 Sulfatase NtRootA1_23460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_23470 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_23480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_23480 PF00005 ABC transporter NtRootA1_23490 PF00005 ABC transporter NtRootA1_23490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_23500 PF00884 Sulfatase NtRootA1_23510 PF00884 Sulfatase NtRootA1_23510 PF16347 Domain of unknown function (DUF4976) NtRootA1_23520 PF07691 PA14 domain NtRootA1_23520 PF14310 Fibronectin type III-like domain NtRootA1_23520 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA1_23520 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_23530 PF00884 Sulfatase NtRootA1_23530 PF16347 Domain of unknown function (DUF4976) NtRootA1_23550 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_23560 PF07883 Cupin domain NtRootA1_23580 PF07690 Major Facilitator Superfamily NtRootA1_23590 PF01494 FAD binding domain NtRootA1_23600 PF00296 Luciferase-like monooxygenase NtRootA1_23610 PF01494 FAD binding domain NtRootA1_23620 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_23620 PF17866 AAA lid domain NtRootA1_23630 PF00561 alpha/beta hydrolase fold NtRootA1_23650 PF03618 Kinase/pyrophosphorylase NtRootA1_23660 PF00391 PEP-utilising enzyme, mobile domain NtRootA1_23660 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootA1_23660 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootA1_23670 PF01494 FAD binding domain NtRootA1_23710 PF06912 Protein of unknown function (DUF1275) NtRootA1_23720 PF07702 UTRA domain NtRootA1_23720 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_23750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NtRootA1_23750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NtRootA1_23760 PF00676 Dehydrogenase E1 component NtRootA1_23770 PF02779 Transketolase, pyrimidine binding domain NtRootA1_23770 PF02780 Transketolase, C-terminal domain NtRootA1_23780 PF02817 e3 binding domain NtRootA1_23780 PF00364 Biotin-requiring enzyme NtRootA1_23780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA1_23800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_23800 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_23800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_23810 PF00106 short chain dehydrogenase NtRootA1_23830 PF07690 Major Facilitator Superfamily NtRootA1_23850 PF06722 Protein of unknown function (DUF1205) NtRootA1_23880 PF00107 Zinc-binding dehydrogenase NtRootA1_23880 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_23890 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_23910 PF03952 Enolase, N-terminal domain NtRootA1_23910 PF00113 Enolase, C-terminal TIM barrel domain NtRootA1_23920 PF01842 ACT domain NtRootA1_23920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_23920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_23930 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_23950 PF00107 Zinc-binding dehydrogenase NtRootA1_23950 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_23980 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_23990 PF07690 Major Facilitator Superfamily NtRootA1_24000 PF02515 CoA-transferase family III NtRootA1_24010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_24010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_24010 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_24020 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_24020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA1_24020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA1_24030 PF02803 Thiolase, C-terminal domain NtRootA1_24030 PF00108 Thiolase, N-terminal domain NtRootA1_24060 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_24080 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_24090 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_24120 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_24140 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_24150 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_24170 PF16874 Glycosyl hydrolase family 36 C-terminal domain NtRootA1_24170 PF16875 Glycosyl hydrolase family 36 N-terminal domain NtRootA1_24180 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NtRootA1_24190 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_24200 PF00005 ABC transporter NtRootA1_24200 PF00571 CBS domain NtRootA1_24210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_24210 PF03466 LysR substrate binding domain NtRootA1_24220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NtRootA1_24220 PF00355 Rieske [2Fe-2S] domain NtRootA1_24230 PF00970 Oxidoreductase FAD-binding domain NtRootA1_24230 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA1_24230 PF00175 Oxidoreductase NAD-binding domain NtRootA1_24240 PF00171 Aldehyde dehydrogenase family NtRootA1_24300 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_24330 PF01494 FAD binding domain NtRootA1_24360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_24360 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_24360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_24370 PF04199 Putative cyclase NtRootA1_24390 PF01613 Flavin reductase like domain NtRootA1_24420 PF14525 AraC-binding-like domain NtRootA1_24420 PF12833 Helix-turn-helix domain NtRootA1_24430 PF12833 Helix-turn-helix domain NtRootA1_24430 PF14525 AraC-binding-like domain NtRootA1_24440 PF00296 Luciferase-like monooxygenase NtRootA1_24450 PF01613 Flavin reductase like domain NtRootA1_24590 PF08281 Sigma-70, region 4 NtRootA1_24590 PF04542 Sigma-70 region 2 NtRootA1_24660 PF00135 Carboxylesterase family NtRootA1_24730 PF17760 UvrA interaction domain NtRootA1_24730 PF17755 UvrA DNA-binding domain NtRootA1_24730 PF00005 ABC transporter NtRootA1_24740 PF00195 Chalcone and stilbene synthases, N-terminal domain NtRootA1_24740 PF02797 Chalcone and stilbene synthases, C-terminal domain NtRootA1_24760 PF01494 FAD binding domain NtRootA1_24780 PF01327 Polypeptide deformylase NtRootA1_24800 PF13649 Methyltransferase domain NtRootA1_24820 PF01145 SPFH domain / Band 7 family NtRootA1_24830 PF13397 RNA polymerase-binding protein NtRootA1_24840 PF00535 Glycosyl transferase family 2 NtRootA1_24850 PF07969 Amidohydrolase family NtRootA1_24860 PF08148 DSHCT (NUC185) domain NtRootA1_24860 PF00271 Helicase conserved C-terminal domain NtRootA1_24860 PF00270 DEAD/DEAH box helicase NtRootA1_24870 PF00902 Sec-independent protein translocase protein (TatC) NtRootA1_24880 PF02416 mttA/Hcf106 family NtRootA1_24900 PF13280 WYL domain NtRootA1_24910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootA1_24920 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NtRootA1_24920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootA1_24930 PF03136 Pup-ligase protein NtRootA1_24940 PF00227 Proteasome subunit NtRootA1_24950 PF00227 Proteasome subunit NtRootA1_24960 PF05639 Pup-like protein NtRootA1_24970 PF03136 Pup-ligase protein NtRootA1_24980 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_24980 PF16450 Proteasomal ATPase OB C-terminal domain NtRootA1_24980 PF17758 Proteasomal ATPase OB N-terminal domain NtRootA1_24990 PF08704 tRNA methyltransferase complex GCD14 subunit NtRootA1_25000 PF00571 CBS domain NtRootA1_25000 PF02163 Peptidase family M50 NtRootA1_25010 PF13419 Haloacid dehalogenase-like hydrolase NtRootA1_25030 PF01406 tRNA synthetases class I (C) catalytic domain NtRootA1_25040 PF02673 Bacitracin resistance protein BacA NtRootA1_25050 PF00248 Aldo/keto reductase family NtRootA1_25060 PF00483 Nucleotidyl transferase NtRootA1_25070 PF16363 GDP-mannose 4,6 dehydratase NtRootA1_25080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NtRootA1_25190 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NtRootA1_25200 PF01370 NAD dependent epimerase/dehydratase family NtRootA1_25210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_25220 PF02397 Bacterial sugar transferase NtRootA1_25250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_25250 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_25250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_25260 PF01546 Peptidase family M20/M25/M40 NtRootA1_25260 PF07687 Peptidase dimerisation domain NtRootA1_25330 PF02803 Thiolase, C-terminal domain NtRootA1_25330 PF00108 Thiolase, N-terminal domain NtRootA1_25360 PF00534 Glycosyl transferases group 1 NtRootA1_25360 PF13439 Glycosyltransferase Family 4 NtRootA1_25380 PF00483 Nucleotidyl transferase NtRootA1_25390 PF00106 short chain dehydrogenase NtRootA1_25400 PF08379 Bacterial transglutaminase-like N-terminal region NtRootA1_25400 PF01841 Transglutaminase-like superfamily NtRootA1_25420 PF04174 A circularly permuted ATPgrasp NtRootA1_25440 PF03601 Conserved hypothetical protein 698 NtRootA1_25450 PF11838 ERAP1-like C-terminal domain NtRootA1_25450 PF01433 Peptidase family M1 domain NtRootA1_25460 PF03099 Biotin/lipoate A/B protein ligase family NtRootA1_25460 PF10437 Bacterial lipoate protein ligase C-terminus NtRootA1_25470 PF01197 Ribosomal protein L31 NtRootA1_25480 PF00588 SpoU rRNA Methylase family NtRootA1_25510 PF00083 Sugar (and other) transporter NtRootA1_25520 PF01546 Peptidase family M20/M25/M40 NtRootA1_25520 PF07687 Peptidase dimerisation domain NtRootA1_25540 PF01037 Lrp/AsnC ligand binding domain NtRootA1_25550 PF00155 Aminotransferase class I and II NtRootA1_25570 PF00324 Amino acid permease NtRootA1_25580 PF02627 Carboxymuconolactone decarboxylase family NtRootA1_25590 PF01063 Amino-transferase class IV NtRootA1_25600 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_25600 PF07729 FCD domain NtRootA1_25610 PF07690 Major Facilitator Superfamily NtRootA1_25620 PF00085 Thioredoxin NtRootA1_25630 PF03466 LysR substrate binding domain NtRootA1_25630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_25660 PF00107 Zinc-binding dehydrogenase NtRootA1_25660 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_25670 PF01593 Flavin containing amine oxidoreductase NtRootA1_25680 PF00588 SpoU rRNA Methylase family NtRootA1_25700 PF00005 ABC transporter NtRootA1_25720 PF16555 Gram-positive pilin subunit D1, N-terminal domain NtRootA1_25720 PF00746 LPXTG cell wall anchor motif NtRootA1_25750 PF00005 ABC transporter NtRootA1_25830 PF16326 ABC transporter C-terminal domain NtRootA1_25830 PF12848 ABC transporter NtRootA1_25830 PF00005 ABC transporter NtRootA1_25840 PF02632 BioY family NtRootA1_25850 PF00005 ABC transporter NtRootA1_25860 PF02361 Cobalt transport protein NtRootA1_25870 PF02803 Thiolase, C-terminal domain NtRootA1_25870 PF00108 Thiolase, N-terminal domain NtRootA1_25880 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_25880 PF00501 AMP-binding enzyme NtRootA1_25890 PF04228 Putative neutral zinc metallopeptidase NtRootA1_25900 PF01883 Iron-sulfur cluster assembly protein NtRootA1_25910 PF00005 ABC transporter NtRootA1_25930 PF01458 Uncharacterized protein family (UPF0051) NtRootA1_25940 PF01458 Uncharacterized protein family (UPF0051) NtRootA1_25960 PF00005 ABC transporter NtRootA1_25980 PF02628 Cytochrome oxidase assembly protein NtRootA1_25990 PF01040 UbiA prenyltransferase family NtRootA1_26000 PF00456 Transketolase, thiamine diphosphate binding domain NtRootA1_26000 PF02780 Transketolase, C-terminal domain NtRootA1_26000 PF02779 Transketolase, pyrimidine binding domain NtRootA1_26010 PF00923 Transaldolase/Fructose-6-phosphate aldolase NtRootA1_26020 PF00342 Phosphoglucose isomerase NtRootA1_26030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NtRootA1_26030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NtRootA1_26050 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NtRootA1_26070 PF03840 Preprotein translocase SecG subunit NtRootA1_26080 PF00121 Triosephosphate isomerase NtRootA1_26090 PF00162 Phosphoglycerate kinase NtRootA1_26100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NtRootA1_26100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NtRootA1_26110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NtRootA1_26110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NtRootA1_26120 PF02650 WhiA C-terminal HTH domain NtRootA1_26120 PF14527 WhiA LAGLIDADG-like domain NtRootA1_26120 PF10298 WhiA N-terminal LAGLIDADG-like domain NtRootA1_26130 PF01933 Uncharacterised protein family UPF0052 NtRootA1_26140 PF03668 P-loop ATPase protein family NtRootA1_26150 PF08459 UvrC Helix-hairpin-helix N-terminal NtRootA1_26150 PF01541 GIY-YIG catalytic domain NtRootA1_26150 PF12826 Helix-hairpin-helix motif NtRootA1_26150 PF02151 UvrB/uvrC motif NtRootA1_26160 PF01553 Acyltransferase NtRootA1_26160 PF00501 AMP-binding enzyme NtRootA1_26170 PF13419 Haloacid dehalogenase-like hydrolase NtRootA1_26180 PF17755 UvrA DNA-binding domain NtRootA1_26180 PF17760 UvrA interaction domain NtRootA1_26180 PF00005 ABC transporter NtRootA1_26220 PF02515 CoA-transferase family III NtRootA1_26240 PF00561 alpha/beta hydrolase fold NtRootA1_26260 PF03741 Integral membrane protein TerC family NtRootA1_26270 PF17757 UvrB interaction domain NtRootA1_26270 PF00271 Helicase conserved C-terminal domain NtRootA1_26270 PF04851 Type III restriction enzyme, res subunit NtRootA1_26270 PF02151 UvrB/uvrC motif NtRootA1_26270 PF12344 Ultra-violet resistance protein B NtRootA1_26280 PF04229 GrpB protein NtRootA1_26280 PF01121 Dephospho-CoA kinase NtRootA1_26290 PF09186 Domain of unknown function (DUF1949) NtRootA1_26290 PF01205 Uncharacterized protein family UPF0029 NtRootA1_26310 PF00575 S1 RNA binding domain NtRootA1_26330 PF13530 Sterol carrier protein domain NtRootA1_26330 PF17668 Acetyltransferase (GNAT) domain NtRootA1_26340 PF00476 DNA polymerase family A NtRootA1_26340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootA1_26340 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootA1_26350 PF03061 Thioesterase superfamily NtRootA1_26360 PF01872 RibD C-terminal domain NtRootA1_26400 PF01384 Phosphate transporter family NtRootA1_26420 PF03301 Tryptophan 2,3-dioxygenase NtRootA1_26430 PF00266 Aminotransferase class-V NtRootA1_26450 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_26450 PF07702 UTRA domain NtRootA1_26460 PF00083 Sugar (and other) transporter NtRootA1_26470 PF01869 BadF/BadG/BcrA/BcrD ATPase family NtRootA1_26480 PF01380 SIS domain NtRootA1_26500 PF00005 ABC transporter NtRootA1_26520 PF01300 Telomere recombination NtRootA1_26530 PF00144 Beta-lactamase NtRootA1_26540 PF04679 ATP dependent DNA ligase C terminal region NtRootA1_26540 PF01068 ATP dependent DNA ligase domain NtRootA1_26540 PF13298 DNA polymerase Ligase (LigD) NtRootA1_26560 PF00009 Elongation factor Tu GTP binding domain NtRootA1_26560 PF00679 Elongation factor G C-terminus NtRootA1_26560 PF14492 Elongation Factor G, domain II NtRootA1_26560 PF03144 Elongation factor Tu domain 2 NtRootA1_26560 PF03764 Elongation factor G, domain IV NtRootA1_26600 PF07969 Amidohydrolase family NtRootA1_26610 PF00270 DEAD/DEAH box helicase NtRootA1_26610 PF04408 Helicase associated domain (HA2) NtRootA1_26610 PF00271 Helicase conserved C-terminal domain NtRootA1_26610 PF08482 ATP-dependent helicase C-terminal NtRootA1_26620 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_26620 PF00107 Zinc-binding dehydrogenase NtRootA1_26660 PF03795 YCII-related domain NtRootA1_26680 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootA1_26680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootA1_26690 PF07976 Phenol hydroxylase, C-terminal dimerisation domain NtRootA1_26690 PF01494 FAD binding domain NtRootA1_26730 PF01258 Prokaryotic dksA/traR C4-type zinc finger NtRootA1_26800 PF03462 PCRF domain NtRootA1_26800 PF00472 RF-1 domain NtRootA1_26820 PF01842 ACT domain NtRootA1_26820 PF00742 Homoserine dehydrogenase NtRootA1_26820 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootA1_26830 PF00171 Aldehyde dehydrogenase family NtRootA1_26840 PF01037 Lrp/AsnC ligand binding domain NtRootA1_26860 PF00701 Dihydrodipicolinate synthetase family NtRootA1_26870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_26870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_26870 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_26880 PF04679 ATP dependent DNA ligase C terminal region NtRootA1_26880 PF01068 ATP dependent DNA ligase domain NtRootA1_26880 PF13298 DNA polymerase Ligase (LigD) NtRootA1_26920 PF02885 Glycosyl transferase family, helical bundle domain NtRootA1_26920 PF00591 Glycosyl transferase family, a/b domain NtRootA1_26930 PF00510 Cytochrome c oxidase subunit III NtRootA1_26940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NtRootA1_26940 PF00034 Cytochrome c NtRootA1_26950 PF00355 Rieske [2Fe-2S] domain NtRootA1_26960 PF13631 Cytochrome b(N-terminal)/b6/petB NtRootA1_26970 PF07702 UTRA domain NtRootA1_26970 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_26980 PF00381 PTS HPr component phosphorylation site NtRootA1_26990 PF12270 Cytochrome c oxidase subunit IV NtRootA1_27000 PF00115 Cytochrome C and Quinol oxidase polypeptide I NtRootA1_27010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NtRootA1_27020 PF01521 Iron-sulphur cluster biosynthesis NtRootA1_27030 PF07687 Peptidase dimerisation domain NtRootA1_27030 PF01546 Peptidase family M20/M25/M40 NtRootA1_27050 PF11241 Protein of unknown function (DUF3043) NtRootA1_27060 PF01180 Dihydroorotate dehydrogenase NtRootA1_27070 PF00890 FAD binding domain NtRootA1_27090 PF12697 Alpha/beta hydrolase family NtRootA1_27090 PF08241 Methyltransferase domain NtRootA1_27100 PF01255 Putative undecaprenyl diphosphate synthase NtRootA1_27110 PF02565 Recombination protein O C terminal NtRootA1_27110 PF11967 Recombination protein O N terminal NtRootA1_27120 PF00682 HMGL-like NtRootA1_27120 PF08502 LeuA allosteric (dimerisation) domain NtRootA1_27130 PF05649 Peptidase family M13 NtRootA1_27130 PF01431 Peptidase family M13 NtRootA1_27140 PF03816 Cell envelope-related transcriptional attenuator domain NtRootA1_27150 PF01926 50S ribosome-binding GTPase NtRootA1_27150 PF07650 KH domain NtRootA1_27160 PF01595 Cyclin M transmembrane N-terminal domain NtRootA1_27160 PF00571 CBS domain NtRootA1_27160 PF03471 Transporter associated domain NtRootA1_27170 PF02130 Uncharacterized protein family UPF0054 NtRootA1_27180 PF02562 PhoH-like protein NtRootA1_27200 PF04452 RNA methyltransferase NtRootA1_27210 PF00226 DnaJ domain NtRootA1_27210 PF00684 DnaJ central domain NtRootA1_27210 PF01556 DnaJ C terminal domain NtRootA1_27220 PF01628 HrcA protein C terminal domain NtRootA1_27220 PF08220 DeoR-like helix-turn-helix domain NtRootA1_27250 PF04055 Radical SAM superfamily NtRootA1_27260 PF06421 GTP-binding protein LepA C-terminus NtRootA1_27260 PF00009 Elongation factor Tu GTP binding domain NtRootA1_27260 PF00679 Elongation factor G C-terminus NtRootA1_27280 PF01649 Ribosomal protein S20 NtRootA1_27320 PF16921 Tex protein YqgF-like domain NtRootA1_27320 PF17674 HHH domain NtRootA1_27320 PF00575 S1 RNA binding domain NtRootA1_27320 PF09371 Tex-like protein N-terminal domain NtRootA1_27330 PF02645 Uncharacterised protein, DegV family COG1307 NtRootA1_27340 PF00133 tRNA synthetases class I (I, L, M and V) NtRootA1_27340 PF09334 tRNA synthetases class I (M) NtRootA1_27340 PF13603 Leucyl-tRNA synthetase, Domain 2 NtRootA1_27340 PF08264 Anticodon-binding domain of tRNA NtRootA1_27350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA1_27350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA1_27360 PF00230 Major intrinsic protein NtRootA1_27370 PF01266 FAD dependent oxidoreductase NtRootA1_27370 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootA1_27380 PF04198 Putative sugar-binding domain NtRootA1_27390 PF00248 Aldo/keto reductase family NtRootA1_27420 PF17764 3′ DNA-binding domain (3′BD) NtRootA1_27430 PF00438 S-adenosylmethionine synthetase, N-terminal domain NtRootA1_27430 PF02773 S-adenosylmethionine synthetase, C-terminal domain NtRootA1_27430 PF02772 S-adenosylmethionine synthetase, central domain NtRootA1_27440 PF04127 DNA / pantothenate metabolism flavoprotein NtRootA1_27440 PF02441 Flavoprotein NtRootA1_27450 PF01192 RNA polymerase Rpb6 NtRootA1_27460 PF00625 Guanylate kinase NtRootA1_27480 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NtRootA1_27490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA1_27490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NtRootA1_27490 PF02142 MGS-like domain NtRootA1_27500 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NtRootA1_27500 PF00117 Glutamine amidotransferase class-I NtRootA1_27520 PF01979 Amidohydrolase family NtRootA1_27530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NtRootA1_27530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NtRootA1_27540 PF00156 Phosphoribosyl transferase domain NtRootA1_27560 PF01029 NusB family NtRootA1_27570 PF01132 Elongation factor P (EF-P) OB domain NtRootA1_27570 PF08207 Elongation factor P (EF-P) KOW-like domain NtRootA1_27570 PF09285 Elongation factor P, C-terminal NtRootA1_27590 PF01761 3-dehydroquinate synthase NtRootA1_27600 PF01202 Shikimate kinase NtRootA1_27600 PF01761 3-dehydroquinate synthase NtRootA1_27620 PF01264 Chorismate synthase NtRootA1_27630 PF01487 Type I 3-dehydroquinase NtRootA1_27630 PF01488 Shikimate / quinate 5-dehydrogenase NtRootA1_27630 PF08501 Shikimate dehydrogenase substrate binding domain NtRootA1_27650 PF03652 Holliday junction resolvase NtRootA1_27660 PF02272 DHHA1 domain NtRootA1_27660 PF01411 tRNA synthetases class II (A) NtRootA1_27660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NtRootA1_27690 PF00163 Ribosomal protein S4/S9 N-terminal domain NtRootA1_27690 PF01479 S4 domain NtRootA1_27700 PF16193 AAA C-terminal domain NtRootA1_27700 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_27700 PF12002 MgsA AAA+ ATPase C terminal NtRootA1_27720 PF00583 Acetyltransferase (GNAT) family NtRootA1_27730 PF00152 tRNA synthetases class II (D, K and N) NtRootA1_27730 PF02938 GAD domain NtRootA1_27730 PF01336 OB-fold nucleic acid binding domain NtRootA1_27740 PF03129 Anticodon binding domain NtRootA1_27740 PF13393 Histidyl-tRNA synthetase NtRootA1_27760 PF03993 Domain of Unknown Function (DUF349) NtRootA1_27780 PF13291 ACT domain NtRootA1_27780 PF04607 Region found in RelA / SpoT proteins NtRootA1_27780 PF02824 TGS domain NtRootA1_27790 PF07549 SecD/SecF GG Motif NtRootA1_27790 PF02355 Protein export membrane protein NtRootA1_27800 PF07549 SecD/SecF GG Motif NtRootA1_27800 PF02355 Protein export membrane protein NtRootA1_27820 PF05491 RuvB C-terminal winged helix domain NtRootA1_27820 PF05496 Holliday junction DNA helicase RuvB P-loop domain NtRootA1_27820 PF17864 RuvB AAA lid domain NtRootA1_27830 PF07499 RuvA, C-terminal domain NtRootA1_27830 PF01330 RuvA N terminal domain NtRootA1_27840 PF02075 Crossover junction endodeoxyribonuclease RuvC NtRootA1_27850 PF01709 Transcriptional regulator NtRootA1_27860 PF01174 SNO glutamine amidotransferase family NtRootA1_27870 PF08353 Domain of unknown function (DUF1727) NtRootA1_27870 PF08245 Mur ligase middle domain NtRootA1_27880 PF07685 CobB/CobQ-like glutamine amidotransferase domain NtRootA1_27900 PF01432 Peptidase family M3 NtRootA1_27910 PF01680 SOR/SNZ family NtRootA1_27920 PF01066 CDP-alcohol phosphatidyltransferase NtRootA1_27930 PF01230 HIT domain NtRootA1_27940 PF03129 Anticodon binding domain NtRootA1_27940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA1_27940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NtRootA1_27950 PF02811 PHP domain NtRootA1_27950 PF14579 Helix-hairpin-helix motif NtRootA1_27950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootA1_27950 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootA1_27970 PF01494 FAD binding domain NtRootA1_28000 PF02586 SOS response associated peptidase (SRAP) NtRootA1_28010 PF00462 Glutaredoxin NtRootA1_28020 PF01568 Molydopterin dinucleotide binding domain NtRootA1_28020 PF00384 Molybdopterin oxidoreductase NtRootA1_28070 PF00355 Rieske [2Fe-2S] domain NtRootA1_28100 PF17761 DUF1016 N-terminal domain NtRootA1_28100 PF06250 YhcG PDDEXK nuclease domain NtRootA1_28110 PF01738 Dienelactone hydrolase family NtRootA1_28140 PF00268 Ribonucleotide reductase, small chain NtRootA1_28150 PF02867 Ribonucleotide reductase, barrel domain NtRootA1_28150 PF08343 Ribonucleotide reductase N-terminal NtRootA1_28150 PF00317 Ribonucleotide reductase, all-alpha domain NtRootA1_28160 PF07972 NrdI Flavodoxin like NtRootA1_28180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_28180 PF03466 LysR substrate binding domain NtRootA1_28200 PF02219 Methylenetetrahydrofolate reductase NtRootA1_28260 PF17863 AAA lid domain NtRootA1_28260 PF07726 ATPase family associated with various cellular activities (AAA) NtRootA1_28280 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_28290 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_28310 PF00480 ROK family NtRootA1_28320 PF05175 Methyltransferase small domain NtRootA1_28340 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_28370 PF01467 Cytidylyltransferase-like NtRootA1_28390 PF00171 Aldehyde dehydrogenase family NtRootA1_28400 PF00696 Amino acid kinase family NtRootA1_28400 PF01472 PUA domain NtRootA1_28410 PF01018 GTP1/OBG NtRootA1_28410 PF01926 50S ribosome-binding GTPase NtRootA1_28410 PF09269 Domain of unknown function (DUF1967) NtRootA1_28420 PF01016 Ribosomal L27 protein NtRootA1_28430 PF00829 Ribosomal prokaryotic L21 protein NtRootA1_28440 PF08543 Phosphomethylpyrimidine kinase NtRootA1_28440 PF03070 TENA/THI-4/PQQC family NtRootA1_28440 PF02581 Thiamine monophosphate synthase NtRootA1_28450 PF10150 Ribonuclease E/G family NtRootA1_28490 PF00334 Nucleoside diphosphate kinase NtRootA1_28510 PF08245 Mur ligase middle domain NtRootA1_28510 PF02875 Mur ligase family, glutamate ligase domain NtRootA1_28520 PF00133 tRNA synthetases class I (I, L, M and V) NtRootA1_28520 PF08264 Anticodon-binding domain of tRNA NtRootA1_28540 PF00106 short chain dehydrogenase NtRootA1_28550 PF08264 Anticodon-binding domain of tRNA NtRootA1_28550 PF00133 tRNA synthetases class I (I, L, M and V) NtRootA1_28560 PF06827 Zinc finger found in FPG and IleRS NtRootA1_28560 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootA1_28570 PF01323 DSBA-like thioredoxin domain NtRootA1_28580 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA1_28580 PF06689 ClpX C4-type zinc finger NtRootA1_28580 PF07724 AAA domain (Cdc48 subfamily) NtRootA1_28590 PF00574 Clp protease NtRootA1_28600 PF00574 Clp protease NtRootA1_28610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootA1_28610 PF05698 Bacterial trigger factor protein (TF) C-terminus NtRootA1_28610 PF05697 Bacterial trigger factor protein (TF) NtRootA1_28630 PF06827 Zinc finger found in FPG and IleRS NtRootA1_28630 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootA1_28630 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootA1_28640 PF02502 Ribose/Galactose Isomerase NtRootA1_28660 PF01433 Peptidase family M1 domain NtRootA1_28660 PF11838 ERAP1-like C-terminal domain NtRootA1_28690 PF00924 Mechanosensitive ion channel NtRootA1_28700 PF01152 Bacterial-like globin NtRootA1_28730 PF00005 ABC transporter NtRootA1_28730 PF12848 ABC transporter NtRootA1_28760 PF00436 Single-strand binding protein family NtRootA1_28810 PF00929 Exonuclease NtRootA1_28820 PF01327 Polypeptide deformylase NtRootA1_28860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NtRootA1_28860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NtRootA1_28870 PF03883 Peroxide stress protein YaaA NtRootA1_28880 PF02591 C4-type zinc ribbon domain NtRootA1_28890 PF01784 NIF3 (NGG1p interacting factor 3) NtRootA1_28900 PF01625 Peptide methionine sulfoxide reductase NtRootA1_28910 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA1_28920 PF06426 Serine acetyltransferase, N-terminal NtRootA1_28920 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootA1_28930 PF00106 short chain dehydrogenase NtRootA1_28940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA1_28940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NtRootA1_28950 PF07729 FCD domain NtRootA1_28950 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_28960 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_28960 PF00107 Zinc-binding dehydrogenase NtRootA1_28980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA1_28980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA1_28990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_29000 PF07690 Major Facilitator Superfamily NtRootA1_29000 PF00083 Sugar (and other) transporter NtRootA1_29010 PF09339 IclR helix-turn-helix domain NtRootA1_29010 PF01614 Bacterial transcriptional regulator NtRootA1_29030 PF02146 Sir2 family NtRootA1_29040 PF00578 AhpC/TSA family NtRootA1_29050 PF11253 Protein of unknown function (DUF3052) NtRootA1_29060 PF00456 Transketolase, thiamine diphosphate binding domain NtRootA1_29060 PF17831 Pyruvate dehydrogenase E1 component middle domain NtRootA1_29070 PF13556 PucR C-terminal helix-turn-helix domain NtRootA1_29070 PF17853 GGDEF-like domain NtRootA1_29080 PF00698 Acyl transferase domain NtRootA1_29090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootA1_29090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootA1_29100 PF00550 Phosphopantetheine attachment site NtRootA1_29110 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA1_29110 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA1_29150 PF13335 Magnesium chelatase, subunit ChlI C-terminal NtRootA1_29150 PF01078 Magnesium chelatase, subunit ChlI NtRootA1_29350 PF00589 Phage integrase family NtRootA1_29500 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_29500 PF07724 AAA domain (Cdc48 subfamily) NtRootA1_29500 PF17871 AAA lid domain NtRootA1_29500 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA1_29530 PF00562 RNA polymerase Rpb2, domain 6 NtRootA1_29530 PF10385 RNA polymerase beta subunit external 1 domain NtRootA1_29530 PF04565 RNA polymerase Rpb2, domain 3 NtRootA1_29530 PF04560 RNA polymerase Rpb2, domain 7 NtRootA1_29530 PF04561 RNA polymerase Rpb2, domain 2 NtRootA1_29530 PF04563 RNA polymerase beta subunit NtRootA1_29600 PF04679 ATP dependent DNA ligase C terminal region NtRootA1_29600 PF01068 ATP dependent DNA ligase domain NtRootA1_29730 PF00580 UvrD/REP helicase N-terminal domain NtRootA1_29730 PF12705 PD-(D/E)XK nuclease superfamily NtRootA1_29730 PF13361 UvrD-like helicase C-terminal domain NtRootA1_29750 PF07724 AAA domain (Cdc48 subfamily) NtRootA1_29750 PF17871 AAA lid domain NtRootA1_29750 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA1_29750 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_29900 PF08242 Methyltransferase domain NtRootA1_29930 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_29930 PF12002 MgsA AAA+ ATPase C terminal NtRootA1_29930 PF16193 AAA C-terminal domain NtRootA1_29960 PF02467 Transcription factor WhiB NtRootA1_30070 PF01966 HD domain NtRootA1_30270 PF17820 PDZ domain NtRootA1_30270 PF02163 Peptidase family M50 NtRootA1_30730 PF12462 DNA helicase IV / RNA helicase N terminal NtRootA1_30730 PF13361 UvrD-like helicase C-terminal domain NtRootA1_30730 PF00580 UvrD/REP helicase N-terminal domain NtRootA1_30770 PF03167 Uracil DNA glycosylase superfamily NtRootA1_30930 PF04542 Sigma-70 region 2 NtRootA1_30930 PF08281 Sigma-70, region 4 NtRootA1_31020 PF03061 Thioesterase superfamily NtRootA1_31030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_31030 PF03466 LysR substrate binding domain NtRootA1_31040 PF02515 CoA-transferase family III NtRootA1_31050 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_31050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_31050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_31060 PF02803 Thiolase, C-terminal domain NtRootA1_31060 PF00108 Thiolase, N-terminal domain NtRootA1_31070 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_31080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA1_31080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA1_31120 PF00171 Aldehyde dehydrogenase family NtRootA1_31130 PF00743 Flavin-binding monooxygenase-like NtRootA1_31140 PF07859 alpha/beta hydrolase fold NtRootA1_31140 PF00934 PE family NtRootA1_31150 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_31150 PF00107 Zinc-binding dehydrogenase NtRootA1_31160 PF01590 GAF domain NtRootA1_31160 PF02954 Bacterial regulatory protein, Fis family NtRootA1_31180 PF07690 Major Facilitator Superfamily NtRootA1_31190 PF07690 Major Facilitator Superfamily NtRootA1_31190 PF00083 Sugar (and other) transporter NtRootA1_31240 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_31240 PF00072 Response regulator receiver domain NtRootA1_31250 PF00672 HAMP domain NtRootA1_31250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_31250 PF07730 Histidine kinase NtRootA1_31280 PF07556 Protein of unknown function (DUF1538) NtRootA1_31300 PF01380 SIS domain NtRootA1_31300 PF00571 CBS domain NtRootA1_31310 PF06965 Na+/H+ antiporter 1 NtRootA1_31320 PF01078 Magnesium chelatase, subunit ChlI NtRootA1_31320 PF13335 Magnesium chelatase, subunit ChlI C-terminal NtRootA1_31330 PF02021 Uncharacterised protein family UPF0102 NtRootA1_31340 PF10611 Protein of unknown function (DUF2469) NtRootA1_31350 PF01351 Ribonuclease HII NtRootA1_31360 PF10502 Signal peptidase, peptidase S26 NtRootA1_31370 PF10502 Signal peptidase, peptidase S26 NtRootA1_31380 PF01245 Ribosomal protein L19 NtRootA1_31390 PF01746 tRNA (Guanine-1)-methyltransferase NtRootA1_31400 PF01782 RimM N-terminal domain NtRootA1_31420 PF00886 Ribosomal protein S16 NtRootA1_31440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA1_31450 PF01979 Amidohydrolase family NtRootA1_31460 PF01964 Radical SAM ThiC family NtRootA1_31460 PF13667 ThiC-associated domain NtRootA1_31480 PF00448 SRP54-type protein, GTPase domain NtRootA1_31480 PF02978 Signal peptide binding domain NtRootA1_31480 PF02881 SRP54-type protein, helical bundle domain NtRootA1_31490 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NtRootA1_31490 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NtRootA1_31500 PF00543 Nitrogen regulatory protein P-II NtRootA1_31510 PF00909 Ammonium Transporter Family NtRootA1_31520 PF07690 Major Facilitator Superfamily NtRootA1_31530 PF02881 SRP54-type protein, helical bundle domain NtRootA1_31530 PF00448 SRP54-type protein, GTPase domain NtRootA1_31540 PF06470 SMC proteins Flexible Hinge Domain NtRootA1_31540 PF02463 RecF/RecN/SMC N terminal domain NtRootA1_31600 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootA1_31600 PF06827 Zinc finger found in FPG and IleRS NtRootA1_31600 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootA1_31610 PF00035 Double-stranded RNA binding motif NtRootA1_31610 PF14622 Ribonuclease-III-like NtRootA1_31620 PF01783 Ribosomal L32p protein family NtRootA1_31630 PF02620 Large ribosomal RNA subunit accumulation protein YceD NtRootA1_31640 PF01467 Cytidylyltransferase-like NtRootA1_31650 PF00155 Aminotransferase class I and II NtRootA1_31680 PF00271 Helicase conserved C-terminal domain NtRootA1_31680 PF00270 DEAD/DEAH box helicase NtRootA1_31680 PF17191 RecG wedge domain NtRootA1_31690 PF13684 Dihydroxyacetone kinase family NtRootA1_31690 PF02734 DAK2 domain NtRootA1_31700 PF00586 AIR synthase related protein, N-terminal domain NtRootA1_31700 PF02769 AIR synthase related protein, C-terminal domain NtRootA1_31720 PF07478 D-ala D-ala ligase C-terminus NtRootA1_31720 PF01820 D-ala D-ala ligase N-terminus NtRootA1_31730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NtRootA1_31730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NtRootA1_31750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootA1_31760 PF00694 Aconitase C-terminal domain NtRootA1_31770 PF00330 Aconitase family (aconitate hydratase) NtRootA1_31780 PF01614 Bacterial transcriptional regulator NtRootA1_31780 PF09339 IclR helix-turn-helix domain NtRootA1_31830 PF00749 tRNA synthetases class I (E and Q), catalytic domain NtRootA1_31840 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_31850 PF00753 Metallo-beta-lactamase superfamily NtRootA1_31850 PF16123 Hydroxyacylglutathione hydrolase C-terminus NtRootA1_31860 PF01063 Amino-transferase class IV NtRootA1_31870 PF00180 Isocitrate/isopropylmalate dehydrogenase NtRootA1_31880 PF07730 Histidine kinase NtRootA1_31890 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_31890 PF00072 Response regulator receiver domain NtRootA1_31900 PF12704 MacB-like periplasmic core domain NtRootA1_31900 PF02687 FtsX-like permease family NtRootA1_31900 PF00005 ABC transporter NtRootA1_31910 PF18075 FtsX extracellular domain NtRootA1_31910 PF02687 FtsX-like permease family NtRootA1_31920 PF09334 tRNA synthetases class I (M) NtRootA1_31920 PF08264 Anticodon-binding domain of tRNA NtRootA1_31930 PF12704 MacB-like periplasmic core domain NtRootA1_31930 PF02687 FtsX-like permease family NtRootA1_31930 PF00005 ABC transporter NtRootA1_31950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_31950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_31950 PF01842 ACT domain NtRootA1_31960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NtRootA1_31960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NtRootA1_31970 PF10369 Small subunit of acetolactate synthase NtRootA1_31980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_31980 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_31980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_31990 PF00920 Dehydratase family NtRootA1_32000 PF00573 Ribosomal protein L4/L1 family NtRootA1_32010 PF07995 Glucose / Sorbosone dehydrogenase NtRootA1_32030 PF00578 AhpC/TSA family NtRootA1_32050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_32060 PF06039 Malate:quinone oxidoreductase (Mqo) NtRootA1_32070 PF00873 AcrB/AcrD/AcrF family NtRootA1_32080 PF00296 Luciferase-like monooxygenase NtRootA1_32090 PF01047 MarR family NtRootA1_32100 PF08379 Bacterial transglutaminase-like N-terminal region NtRootA1_32100 PF01841 Transglutaminase-like superfamily NtRootA1_32150 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_32170 PF00266 Aminotransferase class-V NtRootA1_32180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NtRootA1_32180 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NtRootA1_32190 PF00890 FAD binding domain NtRootA1_32190 PF02910 Fumarate reductase flavoprotein C-term NtRootA1_32210 PF02445 Quinolinate synthetase A protein NtRootA1_32220 PF00293 NUDIX domain NtRootA1_32230 PF01037 Lrp/AsnC ligand binding domain NtRootA1_32240 PF00324 Amino acid permease NtRootA1_32250 PF00676 Dehydrogenase E1 component NtRootA1_32260 PF02779 Transketolase, pyrimidine binding domain NtRootA1_32260 PF02780 Transketolase, C-terminal domain NtRootA1_32270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA1_32270 PF00364 Biotin-requiring enzyme NtRootA1_32270 PF02817 e3 binding domain NtRootA1_32300 PF05139 Erythromycin esterase NtRootA1_32300 PF00156 Phosphoribosyl transferase domain NtRootA1_32310 PF07690 Major Facilitator Superfamily NtRootA1_32310 PF00083 Sugar (and other) transporter NtRootA1_32320 PF01614 Bacterial transcriptional regulator NtRootA1_32320 PF09339 IclR helix-turn-helix domain NtRootA1_32350 PF14525 AraC-binding-like domain NtRootA1_32360 PF00884 Sulfatase NtRootA1_32360 PF16347 Domain of unknown function (DUF4976) NtRootA1_32370 PF00005 ABC transporter NtRootA1_32380 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_32390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_32450 PF13476 AAA domain NtRootA1_32460 PF12320 Type 5 capsule protein repressor C-terminal domain NtRootA1_32460 PF00149 Calcineurin-like phosphoesterase NtRootA1_32470 PF00230 Major intrinsic protein NtRootA1_32480 PF02656 Domain of unknown function (DUF202) NtRootA1_32490 PF02656 Domain of unknown function (DUF202) NtRootA1_32510 PF11490 DNA polymerase III polC-type N-terminus II NtRootA1_32510 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootA1_32510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootA1_32510 PF14579 Helix-hairpin-helix motif NtRootA1_32510 PF02811 PHP domain NtRootA1_32510 PF00929 Exonuclease NtRootA1_32520 PF09335 SNARE associated Golgi protein NtRootA1_32530 PF01725 Ham1 family NtRootA1_32540 PF03725 3' exoribonuclease family, domain 2 NtRootA1_32540 PF01138 3' exoribonuclease family, domain 1 NtRootA1_32550 PF12706 Beta-lactamase superfamily domain NtRootA1_32550 PF00753 Metallo-beta-lactamase superfamily NtRootA1_32560 PF01177 Asp/Glu/Hydantoin racemase NtRootA1_32580 PF02617 ATP-dependent Clp protease adaptor protein ClpS NtRootA1_32590 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NtRootA1_32590 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NtRootA1_32600 PF00857 Isochorismatase family NtRootA1_32610 PF04851 Type III restriction enzyme, res subunit NtRootA1_32630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NtRootA1_32650 PF13732 Domain of unknown function (DUF4162) NtRootA1_32650 PF00005 ABC transporter NtRootA1_32660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootA1_32690 PF01594 AI-2E family transporter NtRootA1_32720 PF01939 Endonuclease NucS NtRootA1_32730 PF01979 Amidohydrolase family NtRootA1_32740 PF00313 'Cold-shock' DNA-binding domain NtRootA1_32750 PF09924 Uncharacterised conserved protein (DUF2156) NtRootA1_32760 PF00756 Putative esterase NtRootA1_32780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NtRootA1_32790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootA1_32790 PF02874 ATP synthase alpha/beta family, beta-barrel domain NtRootA1_32800 PF00231 ATP synthase NtRootA1_32810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootA1_32810 PF00306 ATP synthase alpha/beta chain, C terminal domain NtRootA1_32810 PF02874 ATP synthase alpha/beta family, beta-barrel domain NtRootA1_32820 PF00213 ATP synthase delta (OSCP) subunit NtRootA1_32830 PF00430 ATP synthase B/B' CF(0) NtRootA1_32840 PF00137 ATP synthase subunit C NtRootA1_32850 PF00119 ATP synthase A chain NtRootA1_32880 PF00953 Glycosyl transferase family 4 NtRootA1_32910 PF01300 Telomere recombination NtRootA1_32920 PF13649 Methyltransferase domain NtRootA1_32920 PF17827 PrmC N-terminal domain NtRootA1_32930 PF03462 PCRF domain NtRootA1_32930 PF00472 RF-1 domain NtRootA1_32940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootA1_32940 PF07498 Rho termination factor, N-terminal domain NtRootA1_32940 PF07497 Rho termination factor, RNA-binding domain NtRootA1_32950 PF00288 GHMP kinases N terminal domain NtRootA1_32960 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA1_32970 PF01842 ACT domain NtRootA1_32970 PF00742 Homoserine dehydrogenase NtRootA1_32970 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootA1_32980 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NtRootA1_32980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NtRootA1_32990 PF05746 DALR anticodon binding domain NtRootA1_32990 PF00750 tRNA synthetases class I (R) NtRootA1_32990 PF03485 Arginyl tRNA synthetase N terminal domain NtRootA1_33020 PF00970 Oxidoreductase FAD-binding domain NtRootA1_33020 PF00175 Oxidoreductase NAD-binding domain NtRootA1_33020 PF00042 Globin NtRootA1_33030 PF16485 Protealysin propeptide NtRootA1_33030 PF01447 Thermolysin metallopeptidase, catalytic domain NtRootA1_33030 PF02868 Thermolysin metallopeptidase, alpha-helical domain NtRootA1_33050 PF01965 DJ-1/PfpI family NtRootA1_33070 PF00270 DEAD/DEAH box helicase NtRootA1_33070 PF00271 Helicase conserved C-terminal domain NtRootA1_33070 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NtRootA1_33070 PF04408 Helicase associated domain (HA2) NtRootA1_33070 PF11898 Domain of unknown function (DUF3418) NtRootA1_33080 PF01230 HIT domain NtRootA1_33090 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_33090 PF00107 Zinc-binding dehydrogenase NtRootA1_33120 PF00581 Rhodanese-like domain NtRootA1_33150 PF01475 Ferric uptake regulator family NtRootA1_33160 PF00950 ABC 3 transport family NtRootA1_33170 PF00005 ABC transporter NtRootA1_33190 PF00571 CBS domain NtRootA1_33190 PF01595 Cyclin M transmembrane N-terminal domain NtRootA1_33200 PF00571 CBS domain NtRootA1_33200 PF03471 Transporter associated domain NtRootA1_33200 PF01595 Cyclin M transmembrane N-terminal domain NtRootA1_33210 PF16870 2-oxoglutarate dehydrogenase C-terminal NtRootA1_33210 PF16078 2-oxoglutarate dehydrogenase N-terminus NtRootA1_33210 PF00676 Dehydrogenase E1 component NtRootA1_33210 PF02779 Transketolase, pyrimidine binding domain NtRootA1_33210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA1_33260 PF04542 Sigma-70 region 2 NtRootA1_33260 PF08281 Sigma-70, region 4 NtRootA1_33280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootA1_33290 PF03193 RsgA GTPase NtRootA1_33300 PF00459 Inositol monophosphatase family NtRootA1_33310 PF00266 Aminotransferase class-V NtRootA1_33320 PF08241 Methyltransferase domain NtRootA1_33340 PF07690 Major Facilitator Superfamily NtRootA1_33360 PF13180 PDZ domain NtRootA1_33370 PF01668 SmpB protein NtRootA1_33380 PF01551 Peptidase family M23 NtRootA1_33390 PF18075 FtsX extracellular domain NtRootA1_33390 PF02687 FtsX-like permease family NtRootA1_33400 PF00005 ABC transporter NtRootA1_33410 PF03462 PCRF domain NtRootA1_33410 PF00472 RF-1 domain NtRootA1_33470 PF00437 Type II/IV secretion system protein NtRootA1_33480 PF01183 Glycosyl hydrolases family 25 NtRootA1_33540 PF00535 Glycosyl transferase family 2 NtRootA1_33570 PF00005 ABC transporter NtRootA1_33570 PF14524 Wzt C-terminal domain NtRootA1_33580 PF01061 ABC-2 type transporter NtRootA1_33590 PF17994 Galactofuranosyltransferase 2 N-terminal NtRootA1_33600 PF03275 UDP-galactopyranose mutase NtRootA1_33610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_33610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_33620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NtRootA1_33630 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootA1_33640 PF01580 FtsK/SpoIIIE family NtRootA1_33640 PF12538 DNA transporter NtRootA1_33660 PF02467 Transcription factor WhiB NtRootA1_33670 PF12282 Signal transduction histidine kinase NtRootA1_33670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_33670 PF07568 Histidine kinase NtRootA1_33680 PF05088 Bacterial NAD-glutamate dehydrogenase NtRootA1_33750 PF01043 SecA preprotein cross-linking domain NtRootA1_33750 PF07517 SecA DEAD-like domain NtRootA1_33750 PF07516 SecA Wing and Scaffold domain NtRootA1_33760 PF06224 Winged helix DNA-binding domain NtRootA1_33770 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NtRootA1_33770 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NtRootA1_33790 PF10646 Sporulation and spore germination NtRootA1_33790 PF10647 Lipoprotein LpqB beta-propeller domain NtRootA1_33800 PF00672 HAMP domain NtRootA1_33800 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_33800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_33810 PF00072 Response regulator receiver domain NtRootA1_33810 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_33840 PF14258 Domain of unknown function (DUF4350) NtRootA1_33850 PF17863 AAA lid domain NtRootA1_33850 PF07726 ATPase family associated with various cellular activities (AAA) NtRootA1_33910 PF00005 ABC transporter NtRootA1_33910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_33920 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_33920 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA1_33930 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_33980 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_33980 PF14759 Reductase C-terminal NtRootA1_33990 PF00266 Aminotransferase class-V NtRootA1_34030 PF00781 Diacylglycerol kinase catalytic domain NtRootA1_34040 PF00684 DnaJ central domain NtRootA1_34040 PF01556 DnaJ C terminal domain NtRootA1_34040 PF00226 DnaJ domain NtRootA1_34050 PF00588 SpoU rRNA Methylase family NtRootA1_34060 PF04542 Sigma-70 region 2 NtRootA1_34060 PF04545 Sigma-70, region 4 NtRootA1_34070 PF10099 Anti-sigma-K factor rskA NtRootA1_34080 PF02447 GntP family permease NtRootA1_34110 PF00766 Electron transfer flavoprotein FAD-binding domain NtRootA1_34110 PF01012 Electron transfer flavoprotein domain NtRootA1_34120 PF01012 Electron transfer flavoprotein domain NtRootA1_34130 PF13180 PDZ domain NtRootA1_34140 PF04536 TPM domain NtRootA1_34150 PF04012 PspA/IM30 family NtRootA1_34160 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_34160 PF07702 UTRA domain NtRootA1_34170 PF03699 Uncharacterised protein family (UPF0182) NtRootA1_34180 PF13180 PDZ domain NtRootA1_34180 PF05362 Lon protease (S16) C-terminal proteolytic domain NtRootA1_34210 PF00580 UvrD/REP helicase N-terminal domain NtRootA1_34210 PF13361 UvrD-like helicase C-terminal domain NtRootA1_34210 PF00570 HRDC domain NtRootA1_34220 PF09297 NADH pyrophosphatase zinc ribbon domain NtRootA1_34220 PF00293 NUDIX domain NtRootA1_34220 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NtRootA1_34240 PF13361 UvrD-like helicase C-terminal domain NtRootA1_34240 PF00580 UvrD/REP helicase N-terminal domain NtRootA1_34280 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_34290 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_34300 PF00005 ABC transporter NtRootA1_34310 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_34330 PF00202 Aminotransferase class-III NtRootA1_34340 PF00296 Luciferase-like monooxygenase NtRootA1_34350 PF00490 Delta-aminolevulinic acid dehydratase NtRootA1_34370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NtRootA1_34370 PF03900 Porphobilinogen deaminase, C-terminal domain NtRootA1_34380 PF00762 Ferrochelatase NtRootA1_34390 PF06778 Chlorite dismutase NtRootA1_34400 PF01593 Flavin containing amine oxidoreductase NtRootA1_34410 PF01208 Uroporphyrinogen decarboxylase (URO-D) NtRootA1_34420 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NtRootA1_34420 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NtRootA1_34420 PF01488 Shikimate / quinate 5-dehydrogenase NtRootA1_34430 PF00106 short chain dehydrogenase NtRootA1_34440 PF00899 ThiF family NtRootA1_34440 PF00581 Rhodanese-like domain NtRootA1_34450 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_34480 PF01329 Pterin 4 alpha carbinolamine dehydratase NtRootA1_34490 PF05690 Thiazole biosynthesis protein ThiG NtRootA1_34510 PF01266 FAD dependent oxidoreductase NtRootA1_34510 PF05690 Thiazole biosynthesis protein ThiG NtRootA1_34520 PF02581 Thiamine monophosphate synthase NtRootA1_34540 PF00773 RNB domain NtRootA1_34540 PF00575 S1 RNA binding domain NtRootA1_34550 PF00271 Helicase conserved C-terminal domain NtRootA1_34550 PF00270 DEAD/DEAH box helicase NtRootA1_34560 PF01555 DNA methylase NtRootA1_34590 PF05195 Aminopeptidase P, N-terminal domain NtRootA1_34590 PF00557 Metallopeptidase family M24 NtRootA1_34610 PF00571 CBS domain NtRootA1_34610 PF01769 Divalent cation transporter NtRootA1_34610 PF03448 MgtE intracellular N domain NtRootA1_34630 PF01883 Iron-sulfur cluster assembly protein NtRootA1_34630 PF10609 NUBPL iron-transfer P-loop NTPase NtRootA1_34640 PF02416 mttA/Hcf106 family NtRootA1_34660 PF04542 Sigma-70 region 2 NtRootA1_34660 PF08281 Sigma-70, region 4 NtRootA1_34670 PF01596 O-methyltransferase NtRootA1_34710 PF03641 Possible lysine decarboxylase NtRootA1_34720 PF00005 ABC transporter NtRootA1_34730 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_34740 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_34750 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_34760 PF07687 Peptidase dimerisation domain NtRootA1_34760 PF01546 Peptidase family M20/M25/M40 NtRootA1_34770 PF14602 Hexapeptide repeat of succinyl-transferase NtRootA1_34770 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NtRootA1_34800 PF13977 BetI-type transcriptional repressor, C-terminal NtRootA1_34800 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_34810 PF16363 GDP-mannose 4,6 dehydratase NtRootA1_34820 PF00285 Citrate synthase, C-terminal domain NtRootA1_34830 PF00155 Aminotransferase class I and II NtRootA1_34840 PF00037 4Fe-4S binding domain NtRootA1_34870 PF00009 Elongation factor Tu GTP binding domain NtRootA1_34870 PF03144 Elongation factor Tu domain 2 NtRootA1_34870 PF14492 Elongation Factor G, domain II NtRootA1_34870 PF00679 Elongation factor G C-terminus NtRootA1_34890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_34890 PF00005 ABC transporter NtRootA1_34900 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_34900 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA1_34910 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_34940 PF08676 MutL C terminal dimerisation domain NtRootA1_34940 PF01119 DNA mismatch repair protein, C-terminal domain NtRootA1_34990 PF06071 Protein of unknown function (DUF933) NtRootA1_34990 PF01926 50S ribosome-binding GTPase NtRootA1_35000 PF02646 RmuC family NtRootA1_35010 PF02401 LytB protein NtRootA1_35030 PF02601 Exonuclease VII, large subunit NtRootA1_35030 PF13742 OB-fold nucleic acid binding domain NtRootA1_35040 PF02609 Exonuclease VII small subunit NtRootA1_35050 PF03976 Polyphosphate kinase 2 (PPK2) NtRootA1_35060 PF00155 Aminotransferase class I and II NtRootA1_35090 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_35100 PF00005 ABC transporter NtRootA1_35100 PF00571 CBS domain NtRootA1_35110 PF03193 RsgA GTPase NtRootA1_35120 PF03193 RsgA GTPase NtRootA1_35140 PF01301 Glycosyl hydrolases family 35 NtRootA1_35150 PF05726 Pirin C-terminal cupin domain NtRootA1_35150 PF02678 Pirin NtRootA1_35160 PF01869 BadF/BadG/BcrA/BcrD ATPase family NtRootA1_35180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_35180 PF03466 LysR substrate binding domain NtRootA1_35190 PF07690 Major Facilitator Superfamily NtRootA1_35200 PF06736 Protein of unknown function (DUF1211) NtRootA1_35220 PF07690 Major Facilitator Superfamily NtRootA1_35250 PF01544 CorA-like Mg2+ transporter protein NtRootA1_35280 PF00210 Ferritin-like domain NtRootA1_35290 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NtRootA1_35300 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NtRootA1_35320 PF08274 PhnA Zinc-Ribbon NtRootA1_35320 PF03831 PhnA domain NtRootA1_35330 PF00313 'Cold-shock' DNA-binding domain NtRootA1_35400 PF00483 Nucleotidyl transferase NtRootA1_35410 PF01812 5-formyltetrahydrofolate cyclo-ligase family NtRootA1_35450 PF00117 Glutamine amidotransferase class-I NtRootA1_35450 PF00958 GMP synthase C terminal domain NtRootA1_35450 PF02540 NAD synthase NtRootA1_35490 PF01266 FAD dependent oxidoreductase NtRootA1_35490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootA1_35500 PF00478 IMP dehydrogenase / GMP reductase domain NtRootA1_35510 PF00005 ABC transporter NtRootA1_35510 PF00664 ABC transporter transmembrane region NtRootA1_35520 PF00478 IMP dehydrogenase / GMP reductase domain NtRootA1_35520 PF00571 CBS domain NtRootA1_35530 PF01757 Acyltransferase family NtRootA1_35540 PF01757 Acyltransferase family NtRootA1_35580 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_35580 PF00072 Response regulator receiver domain NtRootA1_35590 PF00118 TCP-1/cpn60 chaperonin family NtRootA1_35600 PF00166 Chaperonin 10 Kd subunit NtRootA1_35620 PF18096 THUMP domain-like NtRootA1_35630 PF08501 Shikimate dehydrogenase substrate binding domain NtRootA1_35640 PF00444 Ribosomal protein L36 NtRootA1_35670 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootA1_35680 PF00814 Glycoprotease family NtRootA1_35690 PF13673 Acetyltransferase (GNAT) domain NtRootA1_35690 PF00583 Acetyltransferase (GNAT) family NtRootA1_35700 PF00814 Glycoprotease family NtRootA1_35710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NtRootA1_35720 PF00842 Alanine racemase, C-terminal domain NtRootA1_35720 PF01168 Alanine racemase, N-terminal domain NtRootA1_35740 PF02056 Family 4 glycosyl hydrolase NtRootA1_35740 PF11975 Family 4 glycosyl hydrolase C-terminal domain NtRootA1_35760 PF13439 Glycosyltransferase Family 4 NtRootA1_35760 PF00534 Glycosyl transferases group 1 NtRootA1_35770 PF01268 Formate--tetrahydrofolate ligase NtRootA1_35780 PF01658 Myo-inositol-1-phosphate synthase NtRootA1_35790 PF00248 Aldo/keto reductase family NtRootA1_35800 PF00128 Alpha amylase, catalytic domain NtRootA1_35800 PF11941 Domain of unknown function (DUF3459) NtRootA1_35810 PF00128 Alpha amylase, catalytic domain NtRootA1_35820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootA1_35820 PF00128 Alpha amylase, catalytic domain NtRootA1_35830 PF03853 YjeF-related protein N-terminus NtRootA1_35830 PF01256 Carbohydrate kinase NtRootA1_35840 PF01648 4'-phosphopantetheinyl transferase superfamily NtRootA1_35850 PF01380 SIS domain NtRootA1_35860 PF00485 Phosphoribulokinase / Uridine kinase family NtRootA1_35880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA1_35880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA1_35880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA1_35880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA1_35890 PF00380 Ribosomal protein S9/S16 NtRootA1_35900 PF00572 Ribosomal protein L13 NtRootA1_35960 PF10609 NUBPL iron-transfer P-loop NTPase NtRootA1_35970 PF00437 Type II/IV secretion system protein NtRootA1_36000 PF01416 tRNA pseudouridine synthase NtRootA1_36020 PF01196 Ribosomal protein L17 NtRootA1_36030 PF01000 RNA polymerase Rpb3/RpoA insert domain NtRootA1_36030 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NtRootA1_36030 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NtRootA1_36040 PF00411 Ribosomal protein S11 NtRootA1_36050 PF00416 Ribosomal protein S13/S18 NtRootA1_36060 PF01176 Translation initiation factor 1A / IF-1 NtRootA1_36070 PF03576 Peptidase family S58 NtRootA1_36080 PF00557 Metallopeptidase family M24 NtRootA1_36100 PF00501 AMP-binding enzyme NtRootA1_36110 PF00067 Cytochrome P450 NtRootA1_36120 PF00535 Glycosyl transferase family 2 NtRootA1_36130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootA1_36130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootA1_36150 PF00344 SecY translocase NtRootA1_36160 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NtRootA1_36170 PF00327 Ribosomal protein L30p/L7e NtRootA1_36180 PF03719 Ribosomal protein S5, C-terminal domain NtRootA1_36180 PF00333 Ribosomal protein S5, N-terminal domain NtRootA1_36190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NtRootA1_36200 PF00347 Ribosomal protein L6 NtRootA1_36210 PF00410 Ribosomal protein S8 NtRootA1_36220 PF00281 Ribosomal protein L5 NtRootA1_36220 PF00673 ribosomal L5P family C-terminus NtRootA1_36230 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NtRootA1_36240 PF00238 Ribosomal protein L14p/L23e NtRootA1_36250 PF00366 Ribosomal protein S17 NtRootA1_36260 PF00831 Ribosomal L29 protein NtRootA1_36270 PF00252 Ribosomal protein L16p/L10e NtRootA1_36280 PF07650 KH domain NtRootA1_36280 PF00189 Ribosomal protein S3, C-terminal domain NtRootA1_36290 PF00237 Ribosomal protein L22p/L17e NtRootA1_36300 PF00203 Ribosomal protein S19 NtRootA1_36310 PF03947 Ribosomal Proteins L2, C-terminal domain NtRootA1_36310 PF00181 Ribosomal Proteins L2, RNA binding domain NtRootA1_36320 PF00276 Ribosomal protein L23 NtRootA1_36330 PF00573 Ribosomal protein L4/L1 family NtRootA1_36340 PF00297 Ribosomal protein L3 NtRootA1_36350 PF00338 Ribosomal protein S10p/S20e NtRootA1_36360 PF00232 Glycosyl hydrolase family 1 NtRootA1_36390 PF00009 Elongation factor Tu GTP binding domain NtRootA1_36390 PF03144 Elongation factor Tu domain 2 NtRootA1_36390 PF03143 Elongation factor Tu C-terminal domain NtRootA1_36400 PF00679 Elongation factor G C-terminus NtRootA1_36400 PF14492 Elongation Factor G, domain II NtRootA1_36400 PF03764 Elongation factor G, domain IV NtRootA1_36400 PF00009 Elongation factor Tu GTP binding domain NtRootA1_36400 PF03144 Elongation factor Tu domain 2 NtRootA1_36410 PF00177 Ribosomal protein S7p/S5e NtRootA1_36420 PF00164 Ribosomal protein S12/S23 NtRootA1_36440 PF04983 RNA polymerase Rpb1, domain 3 NtRootA1_36440 PF00623 RNA polymerase Rpb1, domain 2 NtRootA1_36440 PF04997 RNA polymerase Rpb1, domain 1 NtRootA1_36440 PF05000 RNA polymerase Rpb1, domain 4 NtRootA1_36440 PF04998 RNA polymerase Rpb1, domain 5 NtRootA1_36450 PF04563 RNA polymerase beta subunit NtRootA1_36450 PF04561 RNA polymerase Rpb2, domain 2 NtRootA1_36450 PF04565 RNA polymerase Rpb2, domain 3 NtRootA1_36450 PF10385 RNA polymerase beta subunit external 1 domain NtRootA1_36450 PF00562 RNA polymerase Rpb2, domain 6 NtRootA1_36450 PF04560 RNA polymerase Rpb2, domain 7 NtRootA1_36470 PF02803 Thiolase, C-terminal domain NtRootA1_36470 PF00108 Thiolase, N-terminal domain NtRootA1_36480 PF03129 Anticodon binding domain NtRootA1_36480 PF04073 Aminoacyl-tRNA editing domain NtRootA1_36480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA1_36500 PF16320 Ribosomal protein L7/L12 dimerisation domain NtRootA1_36500 PF00542 Ribosomal protein L7/L12 C-terminal domain NtRootA1_36510 PF00466 Ribosomal protein L10 NtRootA1_36540 PF00687 Ribosomal protein L1p/L10e family NtRootA1_36550 PF00298 Ribosomal protein L11, RNA binding domain NtRootA1_36550 PF03946 Ribosomal protein L11, N-terminal domain NtRootA1_36560 PF02357 Transcription termination factor nusG NtRootA1_36570 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NtRootA1_36580 PF00155 Aminotransferase class I and II NtRootA1_36590 PF00072 Response regulator receiver domain NtRootA1_36590 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_36640 PF00365 Phosphofructokinase NtRootA1_36660 PF07690 Major Facilitator Superfamily NtRootA1_36680 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA1_36680 PF01571 Aminomethyltransferase folate-binding domain NtRootA1_36690 PF03358 NADPH-dependent FMN reductase NtRootA1_36690 PF01566 Natural resistance-associated macrophage protein NtRootA1_36700 PF08768 Domain of unknown function (DUF1794) NtRootA1_36720 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_36730 PF00583 Acetyltransferase (GNAT) family NtRootA1_36740 PF17941 Polyphosphate kinase C-terminal domain 1 NtRootA1_36740 PF13089 Polyphosphate kinase N-terminal domain NtRootA1_36740 PF13090 Polyphosphate kinase C-terminal domain 2 NtRootA1_36740 PF02503 Polyphosphate kinase middle domain NtRootA1_36750 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA1_36750 PF00293 NUDIX domain NtRootA1_36760 PF00303 Thymidylate synthase NtRootA1_36770 PF00186 Dihydrofolate reductase NtRootA1_36790 PF02774 Semialdehyde dehydrogenase, dimerisation domain NtRootA1_36790 PF01118 Semialdehyde dehydrogenase, NAD binding domain NtRootA1_36840 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NtRootA1_36840 PF01565 FAD binding domain NtRootA1_36850 PF01575 MaoC like domain NtRootA1_36860 PF13452 N-terminal half of MaoC dehydratase NtRootA1_36910 PF00005 ABC transporter NtRootA1_36920 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_36930 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NtRootA1_36940 PF00248 Aldo/keto reductase family NtRootA1_36950 PF00128 Alpha amylase, catalytic domain NtRootA1_36960 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_36970 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_36990 PF00480 ROK family NtRootA1_37000 PF00999 Sodium/hydrogen exchanger family NtRootA1_37030 PF00270 DEAD/DEAH box helicase NtRootA1_37030 PF00271 Helicase conserved C-terminal domain NtRootA1_37030 PF03880 DbpA RNA binding domain NtRootA1_37050 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_37050 PF00072 Response regulator receiver domain NtRootA1_37060 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_37060 PF00582 Universal stress protein family NtRootA1_37060 PF02702 Osmosensitive K+ channel His kinase sensor domain NtRootA1_37060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_37060 PF13493 Domain of unknown function (DUF4118) NtRootA1_37080 PF03738 Glutathionylspermidine synthase preATP-grasp NtRootA1_37100 PF09594 Glycosyltransferase family 87 NtRootA1_37110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_37110 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_37110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_37130 PF01638 HxlR-like helix-turn-helix NtRootA1_37140 PF09594 Glycosyltransferase family 87 NtRootA1_37150 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootA1_37160 PF00571 CBS domain NtRootA1_37160 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA1_37200 PF00501 AMP-binding enzyme NtRootA1_37200 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_37220 PF00085 Thioredoxin NtRootA1_37240 PF17933 Tetracyclin repressor-like, C-terminal domain NtRootA1_37240 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_37250 PF00005 ABC transporter NtRootA1_37250 PF13732 Domain of unknown function (DUF4162) NtRootA1_37290 PF07885 Ion channel NtRootA1_37310 PF04461 Protein of unknown function (DUF520) NtRootA1_37320 PF03239 Iron permease FTR1 family NtRootA1_37330 PF13473 Cupredoxin-like domain NtRootA1_37330 PF09375 Imelysin NtRootA1_37340 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootA1_37340 PF04261 Dyp-type peroxidase family NtRootA1_37350 PF01435 Peptidase family M48 NtRootA1_37380 PF01475 Ferric uptake regulator family NtRootA1_37390 PF06628 Catalase-related immune-responsive NtRootA1_37390 PF00199 Catalase NtRootA1_37410 PF13520 Amino acid permease NtRootA1_37430 PF00107 Zinc-binding dehydrogenase NtRootA1_37430 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_37440 PF00171 Aldehyde dehydrogenase family NtRootA1_37460 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_37470 PF00892 EamA-like transporter family NtRootA1_37500 PF00202 Aminotransferase class-III NtRootA1_37510 PF00171 Aldehyde dehydrogenase family NtRootA1_37520 PF13556 PucR C-terminal helix-turn-helix domain NtRootA1_37520 PF17853 GGDEF-like domain NtRootA1_37520 PF05651 Putative sugar diacid recognition NtRootA1_37530 PF07690 Major Facilitator Superfamily NtRootA1_37540 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_37540 PF07729 FCD domain NtRootA1_37550 PF00581 Rhodanese-like domain NtRootA1_37550 PF00753 Metallo-beta-lactamase superfamily NtRootA1_37570 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_37580 PF14824 Sirohaem biosynthesis protein central NtRootA1_37580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootA1_37580 PF10414 Sirohaem synthase dimerisation region NtRootA1_37590 PF04960 Glutaminase NtRootA1_37610 PF00324 Amino acid permease NtRootA1_37620 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NtRootA1_37620 PF01276 Orn/Lys/Arg decarboxylase, major domain NtRootA1_37620 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NtRootA1_37630 PF00296 Luciferase-like monooxygenase NtRootA1_37650 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_37660 PF00005 ABC transporter NtRootA1_37680 PF02574 Homocysteine S-methyltransferase NtRootA1_37690 PF00009 Elongation factor Tu GTP binding domain NtRootA1_37700 PF01507 Phosphoadenosine phosphosulfate reductase family NtRootA1_37710 PF01507 Phosphoadenosine phosphosulfate reductase family NtRootA1_37720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootA1_37720 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootA1_37740 PF03458 UPF0126 domain NtRootA1_37780 PF00348 Polyprenyl synthetase NtRootA1_37790 PF01494 FAD binding domain NtRootA1_37800 PF01209 ubiE/COQ5 methyltransferase family NtRootA1_37810 PF00425 chorismate binding enzyme NtRootA1_37820 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_37830 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_37840 PF00005 ABC transporter NtRootA1_37850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_37860 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_37880 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_37890 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_37900 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA1_37930 PF18374 Enolase N-terminal domain-like NtRootA1_37930 PF13378 Enolase C-terminal domain-like NtRootA1_37970 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_37980 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA1_37980 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA1_37990 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_38000 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_38020 PF00501 AMP-binding enzyme NtRootA1_38020 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_38160 PF00082 Subtilase family NtRootA1_38160 PF04151 Bacterial pre-peptidase C-terminal domain NtRootA1_38170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA1_38170 PF00364 Biotin-requiring enzyme NtRootA1_38170 PF02817 e3 binding domain NtRootA1_38180 PF02780 Transketolase, C-terminal domain NtRootA1_38180 PF02779 Transketolase, pyrimidine binding domain NtRootA1_38190 PF00676 Dehydrogenase E1 component NtRootA1_38230 PF02350 UDP-N-acetylglucosamine 2-epimerase NtRootA1_38250 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NtRootA1_38250 PF00535 Glycosyl transferase family 2 NtRootA1_38290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NtRootA1_38290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NtRootA1_38290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NtRootA1_38310 PF00005 ABC transporter NtRootA1_38330 PF00534 Glycosyl transferases group 1 NtRootA1_38380 PF03816 Cell envelope-related transcriptional attenuator domain NtRootA1_38460 PF13614 AAA domain NtRootA1_38500 PF00535 Glycosyl transferase family 2 NtRootA1_38530 PF16363 GDP-mannose 4,6 dehydratase NtRootA1_38540 PF01370 NAD dependent epimerase/dehydratase family NtRootA1_38550 PF02397 Bacterial sugar transferase NtRootA1_38560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NtRootA1_38560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NtRootA1_38560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NtRootA1_38590 PF00483 Nucleotidyl transferase NtRootA1_38620 PF12697 Alpha/beta hydrolase family NtRootA1_38640 PF01022 Bacterial regulatory protein, arsR family NtRootA1_38660 PF04303 PrpF protein NtRootA1_38670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_38670 PF03466 LysR substrate binding domain NtRootA1_38680 PF01569 PAP2 superfamily NtRootA1_38710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_38710 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_38720 PF00072 Response regulator receiver domain NtRootA1_38720 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_38760 PF00437 Type II/IV secretion system protein NtRootA1_38770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NtRootA1_38830 PF00672 HAMP domain NtRootA1_38830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_38830 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_38830 PF13426 PAS domain NtRootA1_38850 PF00248 Aldo/keto reductase family NtRootA1_38860 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_38880 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootA1_38890 PF03358 NADPH-dependent FMN reductase NtRootA1_38900 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NtRootA1_38910 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_38920 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA1_38920 PF00175 Oxidoreductase NAD-binding domain NtRootA1_38920 PF00970 Oxidoreductase FAD-binding domain NtRootA1_38930 PF01883 Iron-sulfur cluster assembly protein NtRootA1_38940 PF05138 Phenylacetic acid catabolic protein NtRootA1_38950 PF06243 Phenylacetic acid degradation B NtRootA1_38960 PF05138 Phenylacetic acid catabolic protein NtRootA1_38970 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootA1_38980 PF01476 LysM domain NtRootA1_38980 PF05257 CHAP domain NtRootA1_39000 PF00672 HAMP domain NtRootA1_39000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_39000 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_39000 PF01627 Hpt domain NtRootA1_39000 PF00072 Response regulator receiver domain NtRootA1_39000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NtRootA1_39010 PF00990 Diguanylate cyclase, GGDEF domain NtRootA1_39010 PF00360 Phytochrome region NtRootA1_39010 PF01590 GAF domain NtRootA1_39010 PF00563 EAL domain NtRootA1_39020 PF00326 Prolyl oligopeptidase family NtRootA1_39020 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NtRootA1_39070 PF13649 Methyltransferase domain NtRootA1_39090 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_39090 PF18698 Histidine kinase sensor domain NtRootA1_39090 PF00989 PAS fold NtRootA1_39090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_39090 PF00672 HAMP domain NtRootA1_39120 PF03707 Bacterial signalling protein N terminal repeat NtRootA1_39120 PF00563 EAL domain NtRootA1_39120 PF00990 Diguanylate cyclase, GGDEF domain NtRootA1_39140 PF03061 Thioesterase superfamily NtRootA1_39150 PF00501 AMP-binding enzyme NtRootA1_39150 PF14535 AMP-binding enzyme C-terminal domain NtRootA1_39180 PF00083 Sugar (and other) transporter NtRootA1_39180 PF07690 Major Facilitator Superfamily NtRootA1_39190 PF00884 Sulfatase NtRootA1_39190 PF16347 Domain of unknown function (DUF4976) NtRootA1_39200 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootA1_39210 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_39220 PF01575 MaoC like domain NtRootA1_39220 PF00171 Aldehyde dehydrogenase family NtRootA1_39230 PF13350 Tyrosine phosphatase family NtRootA1_39240 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_39250 PF01547 Bacterial extracellular solute-binding protein NtRootA1_39260 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_39270 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_39290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_39290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_39300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_39300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_39310 PF13472 GDSL-like Lipase/Acylhydrolase family NtRootA1_39340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA1_39340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA1_39350 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_39360 PF02803 Thiolase, C-terminal domain NtRootA1_39360 PF00108 Thiolase, N-terminal domain NtRootA1_39390 PF00324 Amino acid permease NtRootA1_39400 PF00355 Rieske [2Fe-2S] domain NtRootA1_39410 PF04324 BFD-like [2Fe-2S] binding domain NtRootA1_39410 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_39410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootA1_39410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootA1_39410 PF18267 Rubredoxin NAD+ reductase C-terminal domain NtRootA1_39430 PF00005 ABC transporter NtRootA1_39440 PF00950 ABC 3 transport family NtRootA1_39450 PF00005 ABC transporter NtRootA1_39460 PF01297 Zinc-uptake complex component A periplasmic NtRootA1_39470 PF02517 CPBP intramembrane metalloprotease NtRootA1_39480 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_39490 PF00501 AMP-binding enzyme NtRootA1_39490 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_39500 PF01040 UbiA prenyltransferase family NtRootA1_39540 PF01578 Cytochrome C assembly protein NtRootA1_39560 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootA1_39570 PF00578 AhpC/TSA family NtRootA1_39580 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA1_39600 PF04264 YceI-like domain NtRootA1_39640 PF02629 CoA binding domain NtRootA1_39640 PF06971 Putative DNA-binding protein N-terminus NtRootA1_39680 PF12728 Helix-turn-helix domain NtRootA1_39690 PF00793 DAHP synthetase I family NtRootA1_39700 PF05448 Acetyl xylan esterase (AXE1) NtRootA1_39710 PF09224 Domain of unknown function (DUF1961) NtRootA1_39720 PF13472 GDSL-like Lipase/Acylhydrolase family NtRootA1_39730 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_39740 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_39750 PF01547 Bacterial extracellular solute-binding protein NtRootA1_39770 PF04854 Protein of unknown function, DUF624 NtRootA1_39790 PF07690 Major Facilitator Superfamily NtRootA1_39810 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_39820 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_39840 PF08532 Beta-galactosidase trimerisation domain NtRootA1_39840 PF08533 Beta-galactosidase C-terminal domain NtRootA1_39840 PF02449 Beta-galactosidase NtRootA1_39870 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_39880 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_39930 PF00171 Aldehyde dehydrogenase family NtRootA1_39940 PF13378 Enolase C-terminal domain-like NtRootA1_39940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA1_39950 PF00701 Dihydrodipicolinate synthetase family NtRootA1_39970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_39970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_39980 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_39990 PF07729 FCD domain NtRootA1_39990 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_40000 PF01070 FMN-dependent dehydrogenase NtRootA1_40010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NtRootA1_40010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NtRootA1_40020 PF01022 Bacterial regulatory protein, arsR family NtRootA1_40040 PF00850 Histone deacetylase domain NtRootA1_40050 PF02386 Cation transport protein NtRootA1_40060 PF02080 TrkA-C domain NtRootA1_40060 PF02254 TrkA-N domain NtRootA1_40070 PF14748 Pyrroline-5-carboxylate reductase dimerisation NtRootA1_40070 PF03807 NADP oxidoreductase coenzyme F420-dependent NtRootA1_40080 PF01261 Xylose isomerase-like TIM barrel NtRootA1_40090 PF02541 Ppx/GppA phosphatase family NtRootA1_40110 PF01131 DNA topoisomerase NtRootA1_40110 PF01751 Toprim domain NtRootA1_40110 PF13368 Topoisomerase C-terminal repeat NtRootA1_40130 PF05175 Methyltransferase small domain NtRootA1_40160 PF00581 Rhodanese-like domain NtRootA1_40160 PF17773 UPF0176 acylphosphatase like domain NtRootA1_40160 PF12368 Rhodanase C-terminal NtRootA1_40180 PF00271 Helicase conserved C-terminal domain NtRootA1_40180 PF00270 DEAD/DEAH box helicase NtRootA1_40180 PF09369 Domain of unknown function (DUF1998) NtRootA1_40240 PF00437 Type II/IV secretion system protein NtRootA1_40260 PF01612 3'-5' exonuclease NtRootA1_40260 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootA1_40260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootA1_40260 PF00476 DNA polymerase family A NtRootA1_40290 PF00293 NUDIX domain NtRootA1_40300 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootA1_40300 PF10576 Iron-sulfur binding domain of endonuclease III NtRootA1_40300 PF00633 Helix-hairpin-helix motif NtRootA1_40320 PF16177 Acetyl-coenzyme A synthetase N-terminus NtRootA1_40320 PF00501 AMP-binding enzyme NtRootA1_40320 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_40330 PF00455 DeoR C terminal sensor domain NtRootA1_40330 PF08220 DeoR-like helix-turn-helix domain NtRootA1_40340 PF00005 ABC transporter NtRootA1_40340 PF02687 FtsX-like permease family NtRootA1_40340 PF12704 MacB-like periplasmic core domain NtRootA1_40360 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_40380 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_40390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_40410 PF16874 Glycosyl hydrolase family 36 C-terminal domain NtRootA1_40410 PF16875 Glycosyl hydrolase family 36 N-terminal domain NtRootA1_40420 PF01220 Dehydroquinase class II NtRootA1_40430 PF02674 Colicin V production protein NtRootA1_40440 PF00027 Cyclic nucleotide-binding domain NtRootA1_40440 PF13545 Crp-like helix-turn-helix domain NtRootA1_40480 PF00905 Penicillin binding protein transpeptidase domain NtRootA1_40480 PF00912 Transglycosylase NtRootA1_40490 PF00149 Calcineurin-like phosphoesterase NtRootA1_40500 PF00664 ABC transporter transmembrane region NtRootA1_40500 PF00005 ABC transporter NtRootA1_40510 PF00664 ABC transporter transmembrane region NtRootA1_40510 PF00005 ABC transporter NtRootA1_40540 PF01259 SAICAR synthetase NtRootA1_40550 PF02844 Phosphoribosylglycinamide synthetase, N domain NtRootA1_40550 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NtRootA1_40550 PF02843 Phosphoribosylglycinamide synthetase, C domain NtRootA1_40580 PF00375 Sodium:dicarboxylate symporter family NtRootA1_40600 PF01177 Asp/Glu/Hydantoin racemase NtRootA1_40610 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NtRootA1_40620 PF17831 Pyruvate dehydrogenase E1 component middle domain NtRootA1_40620 PF00456 Transketolase, thiamine diphosphate binding domain NtRootA1_40640 PF12804 MobA-like NTP transferase domain NtRootA1_40650 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootA1_40650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootA1_40650 PF01799 [2Fe-2S] binding domain NtRootA1_40670 PF13478 XdhC Rossmann domain NtRootA1_40670 PF02625 XdhC and CoxI family NtRootA1_40680 PF00860 Permease family NtRootA1_40690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootA1_40700 PF01979 Amidohydrolase family NtRootA1_40730 PF01014 Uricase NtRootA1_40740 PF00860 Permease family NtRootA1_40760 PF01614 Bacterial transcriptional regulator NtRootA1_40760 PF09339 IclR helix-turn-helix domain NtRootA1_40770 PF03949 Malic enzyme, NAD binding domain NtRootA1_40770 PF00390 Malic enzyme, N-terminal domain NtRootA1_40780 PF01274 Malate synthase NtRootA1_40800 PF05899 Protein of unknown function (DUF861) NtRootA1_40800 PF07883 Cupin domain NtRootA1_40830 PF07730 Histidine kinase NtRootA1_40830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_40840 PF00905 Penicillin binding protein transpeptidase domain NtRootA1_40840 PF00912 Transglycosylase NtRootA1_40860 PF07690 Major Facilitator Superfamily NtRootA1_40870 PF00909 Ammonium Transporter Family NtRootA1_40890 PF01740 STAS domain NtRootA1_40890 PF00916 Sulfate permease family NtRootA1_40910 PF02585 GlcNAc-PI de-N-acetylase NtRootA1_40960 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootA1_40970 PF01839 FG-GAP repeat NtRootA1_40970 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NtRootA1_41040 PF00561 alpha/beta hydrolase fold NtRootA1_41060 PF00664 ABC transporter transmembrane region NtRootA1_41060 PF00005 ABC transporter NtRootA1_41070 PF00664 ABC transporter transmembrane region NtRootA1_41070 PF00005 ABC transporter NtRootA1_41100 PF02525 Flavodoxin-like fold NtRootA1_41120 PF01638 HxlR-like helix-turn-helix NtRootA1_41130 PF00975 Thioesterase domain NtRootA1_41140 PF03358 NADPH-dependent FMN reductase NtRootA1_41160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootA1_41160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootA1_41180 PF00561 alpha/beta hydrolase fold NtRootA1_41190 PF05235 CHAD domain NtRootA1_41190 PF01928 CYTH domain NtRootA1_41200 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootA1_41290 PF02515 CoA-transferase family III NtRootA1_41300 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_41310 PF02223 Thymidylate kinase NtRootA1_41340 PF00293 NUDIX domain NtRootA1_41380 PF13649 Methyltransferase domain NtRootA1_41430 PF00202 Aminotransferase class-III NtRootA1_41480 PF00083 Sugar (and other) transporter NtRootA1_41480 PF08946 Osmosensory transporter coiled coil NtRootA1_41490 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_41490 PF00501 AMP-binding enzyme NtRootA1_41500 PF00378 Enoyl-CoA hydratase/isomerase NtRootA1_41510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_41510 PF03466 LysR substrate binding domain NtRootA1_41550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_41570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_41570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_41580 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_41590 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_41600 PF01547 Bacterial extracellular solute-binding protein NtRootA1_41610 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_41620 PF00664 ABC transporter transmembrane region NtRootA1_41620 PF00005 ABC transporter NtRootA1_41630 PF00005 ABC transporter NtRootA1_41650 PF01266 FAD dependent oxidoreductase NtRootA1_41650 PF05690 Thiazole biosynthesis protein ThiG NtRootA1_41660 PF13419 Haloacid dehalogenase-like hydrolase NtRootA1_41670 PF01220 Dehydroquinase class II NtRootA1_41700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_41700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_41710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootA1_41760 PF01261 Xylose isomerase-like TIM barrel NtRootA1_41770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA1_41770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA1_41780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA1_41780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA1_41780 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA1_41790 PF02595 Glycerate kinase family NtRootA1_41800 PF01979 Amidohydrolase family NtRootA1_41810 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_41810 PF00072 Response regulator receiver domain NtRootA1_41820 PF00578 AhpC/TSA family NtRootA1_41830 PF00486 Transcriptional regulatory protein, C terminal NtRootA1_41830 PF00072 Response regulator receiver domain NtRootA1_41840 PF03552 Cellulose synthase NtRootA1_41840 PF07238 PilZ domain NtRootA1_41840 PF00535 Glycosyl transferase family 2 NtRootA1_41850 PF01740 STAS domain NtRootA1_41900 PF00266 Aminotransferase class-V NtRootA1_41910 PF01569 PAP2 superfamily NtRootA1_41930 PF00576 HIUase/Transthyretin family NtRootA1_41950 PF00156 Phosphoribosyl transferase domain NtRootA1_41960 PF00586 AIR synthase related protein, N-terminal domain NtRootA1_41960 PF02769 AIR synthase related protein, C-terminal domain NtRootA1_41980 PF18029 Glyoxalase-like domain NtRootA1_41980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA1_42010 PF07724 AAA domain (Cdc48 subfamily) NtRootA1_42010 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_42010 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA1_42010 PF02861 Clp amino terminal domain, pathogenicity island component NtRootA1_42010 PF17871 AAA lid domain NtRootA1_42030 PF00005 ABC transporter NtRootA1_42030 PF03459 TOBE domain NtRootA1_42040 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_42060 PF03459 TOBE domain NtRootA1_42070 PF01565 FAD binding domain NtRootA1_42070 PF08031 Berberine and berberine like NtRootA1_42100 PF03733 Inner membrane component domain NtRootA1_42120 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NtRootA1_42130 PF05962 HutD NtRootA1_42140 PF00893 Small Multidrug Resistance protein NtRootA1_42150 PF00893 Small Multidrug Resistance protein NtRootA1_42160 PF00248 Aldo/keto reductase family NtRootA1_42170 PF00753 Metallo-beta-lactamase superfamily NtRootA1_42180 PF00270 DEAD/DEAH box helicase NtRootA1_42180 PF00271 Helicase conserved C-terminal domain NtRootA1_42190 PF07690 Major Facilitator Superfamily NtRootA1_42200 PF00376 MerR family regulatory protein NtRootA1_42200 PF09278 MerR, DNA binding NtRootA1_42220 PF05724 Thiopurine S-methyltransferase (TPMT) NtRootA1_42240 PF01546 Peptidase family M20/M25/M40 NtRootA1_42240 PF07687 Peptidase dimerisation domain NtRootA1_42250 PF00083 Sugar (and other) transporter NtRootA1_42260 PF07690 Major Facilitator Superfamily NtRootA1_42280 PF02390 Putative methyltransferase NtRootA1_42320 PF04545 Sigma-70, region 4 NtRootA1_42320 PF04542 Sigma-70 region 2 NtRootA1_42370 PF04434 SWIM zinc finger NtRootA1_42370 PF00176 SNF2 family N-terminal domain NtRootA1_42370 PF00271 Helicase conserved C-terminal domain NtRootA1_42430 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_42450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_42450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_42460 PF13416 Bacterial extracellular solute-binding protein NtRootA1_42470 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_42480 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_42550 PF13411 MerR HTH family regulatory protein NtRootA1_42560 PF00226 DnaJ domain NtRootA1_42560 PF01556 DnaJ C terminal domain NtRootA1_42560 PF00684 DnaJ central domain NtRootA1_42570 PF01025 GrpE NtRootA1_42580 PF00012 Hsp70 protein NtRootA1_42600 PF05675 Protein of unknown function (DUF817) NtRootA1_42610 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) NtRootA1_42620 PF13305 Tetracyclin repressor-like, C-terminal domain NtRootA1_42620 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_42760 PF00155 Aminotransferase class I and II NtRootA1_42770 PF00107 Zinc-binding dehydrogenase NtRootA1_42770 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_42810 PF13520 Amino acid permease NtRootA1_42830 PF02728 Copper amine oxidase, N3 domain NtRootA1_42830 PF01179 Copper amine oxidase, enzyme domain NtRootA1_42840 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_42840 PF13977 BetI-type transcriptional repressor, C-terminal NtRootA1_42850 PF01810 LysE type translocator NtRootA1_42860 PF00171 Aldehyde dehydrogenase family NtRootA1_42870 PF01842 ACT domain NtRootA1_42870 PF01817 Chorismate mutase type II NtRootA1_42870 PF00800 Prephenate dehydratase NtRootA1_42880 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootA1_42900 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_42910 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootA1_42940 PF01022 Bacterial regulatory protein, arsR family NtRootA1_42960 PF00391 PEP-utilising enzyme, mobile domain NtRootA1_42960 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootA1_42970 PF03176 MMPL family NtRootA1_42990 PF08241 Methyltransferase domain NtRootA1_43000 PF03795 YCII-related domain NtRootA1_43010 PF04542 Sigma-70 region 2 NtRootA1_43010 PF08281 Sigma-70, region 4 NtRootA1_43020 PF00248 Aldo/keto reductase family NtRootA1_43030 PF00817 impB/mucB/samB family NtRootA1_43030 PF11799 impB/mucB/samB family C-terminal domain NtRootA1_43050 PF01810 LysE type translocator NtRootA1_43060 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_43070 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootA1_43080 PF07690 Major Facilitator Superfamily NtRootA1_43090 PF00294 pfkB family carbohydrate kinase NtRootA1_43110 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_43110 PF17926 Tetracyclin repressor-like, C-terminal domain NtRootA1_43130 PF00117 Glutamine amidotransferase class-I NtRootA1_43130 PF00425 chorismate binding enzyme NtRootA1_43130 PF04715 Anthranilate synthase component I, N terminal region NtRootA1_43140 PF13091 PLD-like domain NtRootA1_43140 PF13396 Phospholipase_D-nuclease N-terminal NtRootA1_43170 PF00324 Amino acid permease NtRootA1_43180 PF02627 Carboxymuconolactone decarboxylase family NtRootA1_43190 PF00571 CBS domain NtRootA1_43190 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA1_43200 PF00221 Aromatic amino acid lyase NtRootA1_43210 PF00296 Luciferase-like monooxygenase NtRootA1_43240 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootA1_43260 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootA1_43270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootA1_43290 PF00005 ABC transporter NtRootA1_43300 PF09819 ABC-type cobalt transport system, permease component NtRootA1_43330 PF03334 Na+/H+ antiporter subunit NtRootA1_43340 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NtRootA1_43350 PF01899 Na+/H+ ion antiporter subunit NtRootA1_43360 PF00361 Proton-conducting membrane transporter NtRootA1_43370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NtRootA1_43380 PF13244 Domain of unknown function (DUF4040) NtRootA1_43380 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NtRootA1_43380 PF00361 Proton-conducting membrane transporter NtRootA1_43380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NtRootA1_43420 PF00999 Sodium/hydrogen exchanger family NtRootA1_43430 PF00692 dUTPase NtRootA1_43500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA1_43500 PF03466 LysR substrate binding domain NtRootA1_43540 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_43550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_43550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_43600 PF03631 Virulence factor BrkB NtRootA1_43610 PF00480 ROK family NtRootA1_43620 PF01261 Xylose isomerase-like TIM barrel NtRootA1_43630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA1_43630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA1_43640 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_43650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA1_43650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA1_43660 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootA1_43670 PF02610 L-arabinose isomerase NtRootA1_43670 PF11762 L-arabinose isomerase C-terminal domain NtRootA1_43680 PF01263 Aldose 1-epimerase NtRootA1_43690 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_43700 PF05336 L-rhamnose mutarotase NtRootA1_43720 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootA1_43730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA1_43730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA1_43750 PF02261 Aspartate decarboxylase NtRootA1_43760 PF01593 Flavin containing amine oxidoreductase NtRootA1_43780 PF10703 MoaF N-terminal domain NtRootA1_43780 PF17409 MoaF C-terminal domain NtRootA1_43830 PF00723 Glycosyl hydrolases family 15 NtRootA1_43840 PF00296 Luciferase-like monooxygenase NtRootA1_43850 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA1_43850 PF13291 ACT domain NtRootA1_43870 PF00248 Aldo/keto reductase family NtRootA1_43920 PF05872 Bacterial protein of unknown function (DUF853) NtRootA1_43950 PF00578 AhpC/TSA family NtRootA1_43950 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootA1_43950 PF17991 Thioredoxin like C-terminal domain NtRootA1_43960 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NtRootA1_43960 PF05425 Copper resistance protein D NtRootA1_43970 PF00216 Bacterial DNA-binding protein NtRootA1_44010 PF00253 Ribosomal protein S14p/S29e NtRootA1_44020 PF00471 Ribosomal protein L33 NtRootA1_44030 PF00830 Ribosomal L28 family NtRootA1_44040 PF00970 Oxidoreductase FAD-binding domain NtRootA1_44040 PF00175 Oxidoreductase NAD-binding domain NtRootA1_44040 PF00042 Globin NtRootA1_44110 PF08021 Siderophore-interacting FAD-binding domain NtRootA1_44110 PF04954 Siderophore-interacting protein NtRootA1_44120 PF00005 ABC transporter NtRootA1_44130 PF01032 FecCD transport family NtRootA1_44140 PF01032 FecCD transport family NtRootA1_44220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA1_44220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA1_44220 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA1_44250 PF01613 Flavin reductase like domain NtRootA1_44260 PF00248 Aldo/keto reductase family NtRootA1_44360 PF07729 FCD domain NtRootA1_44360 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_44380 PF10415 Fumarase C C-terminus NtRootA1_44380 PF00206 Lyase NtRootA1_44390 PF00324 Amino acid permease NtRootA1_44400 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_44400 PF07729 FCD domain NtRootA1_44410 PF04909 Amidohydrolase NtRootA1_44420 PF00248 Aldo/keto reductase family NtRootA1_44430 PF05336 L-rhamnose mutarotase NtRootA1_44450 PF13378 Enolase C-terminal domain-like NtRootA1_44450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA1_44460 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_44510 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA1_44510 PF06480 FtsH Extracellular NtRootA1_44510 PF01434 Peptidase family M41 NtRootA1_44510 PF17862 AAA+ lid domain NtRootA1_44570 PF13291 ACT domain NtRootA1_44570 PF02824 TGS domain NtRootA1_44570 PF04607 Region found in RelA / SpoT proteins NtRootA1_44580 PF00106 short chain dehydrogenase NtRootA1_44600 PF00144 Beta-lactamase NtRootA1_44610 PF00749 tRNA synthetases class I (E and Q), catalytic domain NtRootA1_44650 PF01566 Natural resistance-associated macrophage protein NtRootA1_44660 PF00701 Dihydrodipicolinate synthetase family NtRootA1_44670 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_44810 PF09339 IclR helix-turn-helix domain NtRootA1_44810 PF01614 Bacterial transcriptional regulator NtRootA1_44820 PF01321 Creatinase/Prolidase N-terminal domain NtRootA1_44820 PF00557 Metallopeptidase family M24 NtRootA1_44830 PF08946 Osmosensory transporter coiled coil NtRootA1_44830 PF00083 Sugar (and other) transporter NtRootA1_44840 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_44840 PF07729 FCD domain NtRootA1_44850 PF00464 Serine hydroxymethyltransferase NtRootA1_44860 PF01266 FAD dependent oxidoreductase NtRootA1_44870 PF04267 Sarcosine oxidase, delta subunit family NtRootA1_44880 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_44880 PF01571 Aminomethyltransferase folate-binding domain NtRootA1_44880 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA1_44880 PF17806 Sarcosine oxidase A3 domain NtRootA1_44890 PF04268 Sarcosine oxidase, gamma subunit family NtRootA1_44900 PF03315 Serine dehydratase beta chain NtRootA1_44900 PF03313 Serine dehydratase alpha chain NtRootA1_44910 PF00551 Formyl transferase NtRootA1_44940 PF01522 Polysaccharide deacetylase NtRootA1_44960 PF03949 Malic enzyme, NAD binding domain NtRootA1_44960 PF00390 Malic enzyme, N-terminal domain NtRootA1_44970 PF17925 Tetracyclin repressor-like, C-terminal domain NtRootA1_44970 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_45040 PF03737 Aldolase/RraA NtRootA1_45050 PF07690 Major Facilitator Superfamily NtRootA1_45060 PF00221 Aromatic amino acid lyase NtRootA1_45070 PF01175 Urocanase Rossmann-like domain NtRootA1_45070 PF17392 Urocanase C-terminal domain NtRootA1_45070 PF17391 Urocanase N-terminal domain NtRootA1_45090 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_45100 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_45110 PF00571 CBS domain NtRootA1_45110 PF00005 ABC transporter NtRootA1_45130 PF01546 Peptidase family M20/M25/M40 NtRootA1_45140 PF01979 Amidohydrolase family NtRootA1_45150 PF00083 Sugar (and other) transporter NtRootA1_45160 PF07690 Major Facilitator Superfamily NtRootA1_45170 PF01047 MarR family NtRootA1_45210 PF13732 Domain of unknown function (DUF4162) NtRootA1_45210 PF00005 ABC transporter NtRootA1_45250 PF00324 Amino acid permease NtRootA1_45260 PF01232 Mannitol dehydrogenase Rossmann domain NtRootA1_45260 PF08125 Mannitol dehydrogenase C-terminal domain NtRootA1_45270 PF02378 Phosphotransferase system, EIIC NtRootA1_45270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NtRootA1_45270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NtRootA1_45290 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootA1_45290 PF00391 PEP-utilising enzyme, mobile domain NtRootA1_45290 PF05524 PEP-utilising enzyme, N-terminal NtRootA1_45300 PF00381 PTS HPr component phosphorylation site NtRootA1_45310 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA1_45310 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA1_45320 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA1_45320 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA1_45330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_45330 PF00005 ABC transporter NtRootA1_45340 PF00005 ABC transporter NtRootA1_45340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_45350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_45350 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA1_45360 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_45370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA1_45380 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_45420 PF00561 alpha/beta hydrolase fold NtRootA1_45440 PF01068 ATP dependent DNA ligase domain NtRootA1_45440 PF04679 ATP dependent DNA ligase C terminal region NtRootA1_45500 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootA1_45500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootA1_45560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA1_45560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA1_45580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA1_45580 PF00005 ABC transporter NtRootA1_45590 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA1_45590 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_45600 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_45610 PF00440 Bacterial regulatory proteins, tetR family NtRootA1_45610 PF17925 Tetracyclin repressor-like, C-terminal domain NtRootA1_45620 PF03358 NADPH-dependent FMN reductase NtRootA1_45670 PF00155 Aminotransferase class I and II NtRootA1_45710 PF02817 e3 binding domain NtRootA1_45710 PF00364 Biotin-requiring enzyme NtRootA1_45710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA1_45720 PF02780 Transketolase, C-terminal domain NtRootA1_45720 PF02779 Transketolase, pyrimidine binding domain NtRootA1_45730 PF00676 Dehydrogenase E1 component NtRootA1_45740 PF00155 Aminotransferase class I and II NtRootA1_45750 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NtRootA1_45780 PF08328 Adenylosuccinate lyase C-terminal NtRootA1_45780 PF00206 Lyase NtRootA1_45790 PF00934 PE family NtRootA1_45790 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA1_45810 PF03061 Thioesterase superfamily NtRootA1_45830 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootA1_45840 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_45850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA1_45860 PF00171 Aldehyde dehydrogenase family NtRootA1_45870 PF07729 FCD domain NtRootA1_45870 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_45880 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_45920 PF04226 Transglycosylase associated protein NtRootA1_45940 PF06445 GyrI-like small molecule binding domain NtRootA1_45940 PF12833 Helix-turn-helix domain NtRootA1_45970 PF06724 Domain of Unknown Function (DUF1206) NtRootA1_46000 PF00083 Sugar (and other) transporter NtRootA1_46020 PF00356 Bacterial regulatory proteins, lacI family NtRootA1_46040 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_46050 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA1_46060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_46060 PF01842 ACT domain NtRootA1_46060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_46070 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootA1_46070 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootA1_46070 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootA1_46090 PF04191 Phospholipid methyltransferase NtRootA1_46110 PF01494 FAD binding domain NtRootA1_46130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_46130 PF00512 His Kinase A (phospho-acceptor) domain NtRootA1_46130 PF00989 PAS fold NtRootA1_46130 PF11808 Phosphate regulon sensor protein PhoR NtRootA1_46140 PF00069 Protein kinase domain NtRootA1_46140 PF03793 PASTA domain NtRootA1_46150 PF01047 MarR family NtRootA1_46170 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA1_46230 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NtRootA1_46240 PF00723 Glycosyl hydrolases family 15 NtRootA1_46260 PF05239 PRC-barrel domain NtRootA1_46260 PF09557 Domain of unknown function (DUF2382) NtRootA1_46280 PF07690 Major Facilitator Superfamily NtRootA1_46340 PF01494 FAD binding domain NtRootA1_46370 PF07690 Major Facilitator Superfamily NtRootA1_46420 PF00384 Molybdopterin oxidoreductase NtRootA1_46420 PF01568 Molydopterin dinucleotide binding domain NtRootA1_46420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NtRootA1_46450 PF04226 Transglycosylase associated protein NtRootA1_46520 PF03793 PASTA domain NtRootA1_46520 PF00069 Protein kinase domain NtRootA1_46530 PF02219 Methylenetetrahydrofolate reductase NtRootA1_46540 PF04055 Radical SAM superfamily NtRootA1_46540 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NtRootA1_46550 PF03313 Serine dehydratase alpha chain NtRootA1_46550 PF03315 Serine dehydratase beta chain NtRootA1_46560 PF00464 Serine hydroxymethyltransferase NtRootA1_46570 PF01597 Glycine cleavage H-protein NtRootA1_46580 PF01571 Aminomethyltransferase folate-binding domain NtRootA1_46580 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA1_46590 PF02347 Glycine cleavage system P-protein NtRootA1_46600 PF13556 PucR C-terminal helix-turn-helix domain NtRootA1_46610 PF00491 Arginase family NtRootA1_46620 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NtRootA1_46630 PF00171 Aldehyde dehydrogenase family NtRootA1_46660 PF16363 GDP-mannose 4,6 dehydratase NtRootA1_46690 PF01741 Large-conductance mechanosensitive channel, MscL NtRootA1_46710 PF07690 Major Facilitator Superfamily NtRootA1_46720 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_46720 PF07729 FCD domain NtRootA1_46730 PF01177 Asp/Glu/Hydantoin racemase NtRootA1_46740 PF01979 Amidohydrolase family NtRootA1_46780 PF02233 NAD(P) transhydrogenase beta subunit NtRootA1_46790 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NtRootA1_46800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootA1_46800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootA1_46810 PF03358 NADPH-dependent FMN reductase NtRootA1_46840 PF13419 Haloacid dehalogenase-like hydrolase NtRootA1_46850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA1_46850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA1_46890 PF07690 Major Facilitator Superfamily NtRootA1_46900 PF01494 FAD binding domain NtRootA1_46910 PF00501 AMP-binding enzyme NtRootA1_46910 PF13193 AMP-binding enzyme C-terminal domain NtRootA1_46940 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA1_46950 PF01042 Endoribonuclease L-PSP NtRootA1_46970 PF09339 IclR helix-turn-helix domain NtRootA1_46970 PF01614 Bacterial transcriptional regulator NtRootA1_46980 PF01144 Coenzyme A transferase NtRootA1_46990 PF01144 Coenzyme A transferase NtRootA1_47000 PF02803 Thiolase, C-terminal domain NtRootA1_47000 PF00108 Thiolase, N-terminal domain NtRootA1_47010 PF02627 Carboxymuconolactone decarboxylase family NtRootA1_47020 PF00561 alpha/beta hydrolase fold NtRootA1_47030 PF10397 Adenylosuccinate lyase C-terminus NtRootA1_47030 PF00206 Lyase NtRootA1_47050 PF00775 Dioxygenase NtRootA1_47050 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NtRootA1_47060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA1_47060 PF01261 Xylose isomerase-like TIM barrel NtRootA1_47070 PF08501 Shikimate dehydrogenase substrate binding domain NtRootA1_47070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootA1_47080 PF09339 IclR helix-turn-helix domain NtRootA1_47080 PF01614 Bacterial transcriptional regulator NtRootA1_47090 PF00083 Sugar (and other) transporter NtRootA1_47120 PF02597 ThiS family NtRootA1_47150 PF02965 Vitamin B12 dependent methionine synthase, activation domain NtRootA1_47150 PF02574 Homocysteine S-methyltransferase NtRootA1_47150 PF00809 Pterin binding enzyme NtRootA1_47150 PF02310 B12 binding domain NtRootA1_47150 PF02607 B12 binding domain NtRootA1_47160 PF00005 ABC transporter NtRootA1_47220 PF00202 Aminotransferase class-III NtRootA1_47230 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_47260 PF01042 Endoribonuclease L-PSP NtRootA1_47290 PF01266 FAD dependent oxidoreductase NtRootA1_47300 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA1_47320 PF00392 Bacterial regulatory proteins, gntR family NtRootA1_47320 PF07729 FCD domain NtRootA1_47370 PF02447 GntP family permease NtRootA1_47380 PF01081 KDPG and KHG aldolase NtRootA1_47390 PF07969 Amidohydrolase family NtRootA1_47420 PF00294 pfkB family carbohydrate kinase NtRootA1_47430 PF09339 IclR helix-turn-helix domain NtRootA1_47430 PF01614 Bacterial transcriptional regulator NtRootA1_47440 PF01042 Endoribonuclease L-PSP NtRootA1_47550 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA1_47550 PF00107 Zinc-binding dehydrogenase NtRootA1_47580 PF01565 FAD binding domain NtRootA1_47580 PF02913 FAD linked oxidases, C-terminal domain NtRootA1_47590 PF01266 FAD dependent oxidoreductase NtRootA1_47590 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootA1_47600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA1_47600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA1_47650 PF00581 Rhodanese-like domain NtRootA1_47670 PF00561 alpha/beta hydrolase fold NtRootA1_47680 PF02583 Metal-sensitive transcriptional repressor NtRootA1_47700 PF00403 Heavy-metal-associated domain NtRootA1_47770 PF01554 MatE NtRootA1_47790 PF07681 DoxX NtRootA1_47820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootA1_47820 PF00391 PEP-utilising enzyme, mobile domain NtRootA1_47850 PF03061 Thioesterase superfamily NtRootA1_47880 PF00772 DnaB-like helicase N terminal domain NtRootA1_47880 PF03796 DnaB-like helicase C terminal domain NtRootA1_47920 PF03358 NADPH-dependent FMN reductase NtRootA1_47940 PF00135 Carboxylesterase family NtRootA1_47950 PF02447 GntP family permease NtRootA1_47960 PF02447 GntP family permease NtRootA1_47970 PF02515 CoA-transferase family III NtRootA1_47980 PF00682 HMGL-like NtRootA1_48020 PF01614 Bacterial transcriptional regulator NtRootA1_48020 PF09339 IclR helix-turn-helix domain NtRootA1_48050 PF01281 Ribosomal protein L9, N-terminal domain NtRootA1_48050 PF03948 Ribosomal protein L9, C-terminal domain NtRootA1_48060 PF01084 Ribosomal protein S18 NtRootA1_48070 PF00436 Single-strand binding protein family NtRootA1_48080 PF01250 Ribosomal protein S6 NtRootA1_48110 PF00324 Amino acid permease NtRootA1_48120 PF02127 Aminopeptidase I zinc metalloprotease (M18) NtRootA1_48180 PF00324 Amino acid permease NtRootA1_48190 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_48190 PF00072 Response regulator receiver domain NtRootA1_48200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA1_48200 PF07730 Histidine kinase NtRootA1_48220 PF00005 ABC transporter NtRootA1_48230 PF00781 Diacylglycerol kinase catalytic domain NtRootA1_48250 PF07690 Major Facilitator Superfamily NtRootA1_48260 PF00455 DeoR C terminal sensor domain NtRootA1_48260 PF08220 DeoR-like helix-turn-helix domain NtRootA1_48270 PF16326 ABC transporter C-terminal domain NtRootA1_48270 PF00005 ABC transporter NtRootA1_48270 PF12848 ABC transporter NtRootA1_48280 PF01494 FAD binding domain NtRootA1_48300 PF00905 Penicillin binding protein transpeptidase domain NtRootA1_48310 PF00196 Bacterial regulatory proteins, luxR family NtRootA1_48310 PF00072 Response regulator receiver domain NtRootA1_48320 PF07730 Histidine kinase NtRootA1_48340 PF00005 ABC transporter NtRootA1_48350 PF01638 HxlR-like helix-turn-helix NtRootA1_48360 PF13460 NAD(P)H-binding NtRootA1_48400 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA1_48410 PF01743 Poly A polymerase head domain NtRootA1_48410 PF12627 Probable RNA and SrmB- binding site of polymerase A NtRootA1_48410 PF13735 tRNA nucleotidyltransferase domain 2 putative NtRootA1_48420 PF00293 NUDIX domain NtRootA1_48430 PF03023 Lipid II flippase MurJ NtRootA1_48450 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA1_48460 PF00085 Thioredoxin NtRootA1_48490 PF17762 HTH domain found in ParB protein NtRootA1_48490 PF02195 ParB-like nuclease domain NtRootA1_48500 PF13614 AAA domain NtRootA1_48510 PF02527 rRNA small subunit methyltransferase G NtRootA1_48530 PF02096 60Kd inner membrane protein NtRootA1_48540 PF01809 Putative membrane protein insertion efficiency factor NtRootA1_48550 PF00825 Ribonuclease P NtRootA1_48560 PF00468 Ribosomal protein L34